RPSBLAST alignment for GI: 254780139 and conserved domain: TIGR03719
>gnl|CDD|163431 TIGR03719, ABC_ABC_ChvD, ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown. Length = 552
Score = 72.3 bits (178), Expect = 1e-13
Identities = 69/228 (30%), Positives = 98/228 (42%), Gaps = 58/228 (25%)
Query: 24 NNRIILNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVLGEHLNLAKGK 83
+ IL +I+L G +GV+G +G GKS L+R + G+ +GE + A G
Sbjct: 16 PKKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEAR-------PAPG- 67
Query: 84 QNFAFSAKLGVLFQHGALFSSMTVQENISMPIKEHLNL---------------------- 121
K+G L Q L + TV+EN+ + E +
Sbjct: 68 ------IKVGYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALL 121
Query: 122 --PADLIEHIVHTK---------IAIVGL--PPETANLMPFQLSGGMIKRVSLARALAID 168
A+L E I IA+ L PP A++ LSGG +RV+L R L
Sbjct: 122 AEQAELQEIIDAADAWDLDRKLEIAMDALRCPPWDADVTK--LSGGERRRVALCRLLLSK 179
Query: 169 PDLLFLDEPTSGLDPIAAEEFDKLLIKLRHSLGLSVYMITHD---LNN 213
PD+L LDEPT+ LD AE L L+ G +V +THD L+N
Sbjct: 180 PDMLLLDEPTNHLD---AESVAWLEQHLQEYPG-TVVAVTHDRYFLDN 223