RPSBLAST alignment for GI: 254780139 and conserved domain: COG0178
>gnl|CDD|30527 COG0178, UvrA, Excinuclease ATPase subunit [DNA replication, recombination, and repair]. Length = 935
Score = 38.2 bits (89), Expect = 0.002
Identities = 41/161 (25%), Positives = 64/161 (39%), Gaps = 25/161 (15%)
Query: 106 TVQENISMPIKEHLNLPADLIEHIVHTKIAI---------------VGLPPETANLMPFQ 150
+ E M I + L +L KIA VGL T +
Sbjct: 422 NIAEISEMSIADALEFFENLKLSEKEKKIAEPILKEIKERLGFLVDVGLGYLTLSRSAGT 481
Query: 151 LSGGMIKRVSLARAL--AIDPDLLFLDEPTSGLDPIAAEEFDKLLIKLRHSLGLSVYMIT 208
LSGG +R+ LA + + L LDEP+ GL E + L +LR LG +V ++
Sbjct: 482 LSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLIETLKRLR-DLGNTVIVVE 540
Query: 209 HDLNNLISTCNRVAVIQKKG------IMKEGTISDIVDSND 243
HD + I + + I I+ EGT +++ + +
Sbjct: 541 HDE-DTIRAADHIIDIGPGAGEHGGEIVAEGTPEELLANPE 580