RPSBLAST alignment for GI: 254780139 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 81.0 bits (200), Expect = 3e-16
Identities = 66/216 (30%), Positives = 107/216 (49%), Gaps = 26/216 (12%)
Query: 29 LNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVLG---EHLNLAKGKQN 85
L+N++L I GE + +IG G+GKS L++ + GL SG V + G L+ A ++N
Sbjct: 20 LDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79
Query: 86 FAFSAKLGVLFQHGALFSSMTVQENISMPIKEHLNLPADLIEHIVHTKIA----IVGLPP 141
+G + Q LF T+++NI++ AD + ++A V P
Sbjct: 80 ------IGYVPQDVTLFYG-TLRDNITLG-----APLADDERILRAAELAGVTDFVNKHP 127
Query: 142 ETANLM----PFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFDKLLIKLR 197
+L LSGG + V+LARAL DP +L LDEPTS +D + E + L +L
Sbjct: 128 NGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLL 187
Query: 198 HSLGLSVYMITHDLNNLISTCNRVAVIQKKGIMKEG 233
++ +ITH +L+ +R+ V+ I+ +G
Sbjct: 188 G--DKTLIIITHRP-SLLDLVDRIIVMDSGRIVADG 220