RPSBLAST alignment for GI: 254780139 and conserved domain: cd03294

>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
 Score =  144 bits (364), Expect = 3e-35
 Identities = 77/224 (34%), Positives = 129/224 (57%), Gaps = 4/224 (1%)

Query: 29  LNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVLGEHLNLAKGKQNFAF 88
           +N+++LD+  GEI  ++G SG+GKS L+R I  LI   SG+V + G+ +     K+    
Sbjct: 40  VNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELREL 99

Query: 89  -SAKLGVLFQHGALFSSMTVQENISMPIKEHLNLPADLIEHIVHTKIAIVGLPPETANLM 147
              K+ ++FQ  AL    TV EN++  + E   +P    E      + +VGL     +  
Sbjct: 100 RRKKISMVFQSFALLPHRTVLENVAFGL-EVQGVPRAEREERAAEALELVGLEGW-EHKY 157

Query: 148 PFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFDKLLIKLRHSLGLSVYMI 207
           P +LSGGM +RV LARALA+DPD+L +DE  S LDP+   E    L++L+  L  ++  I
Sbjct: 158 PDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFI 217

Query: 208 THDLNNLISTCNRVAVIQKKGIMKEGTISDIVDS-NDPWIRSYF 250
           THDL+  +   +R+A+++   +++ GT  +I+ +  + ++R +F
Sbjct: 218 THDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYVREFF 261