RPSBLAST alignment for GI: 254780139 and conserved domain: cd03294
>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
Score = 144 bits (364), Expect = 3e-35
Identities = 77/224 (34%), Positives = 129/224 (57%), Gaps = 4/224 (1%)
Query: 29 LNNINLDILRGEILGVIGSSGTGKSILMRGILGLIPRVSGEVKVLGEHLNLAKGKQNFAF 88
+N+++LD+ GEI ++G SG+GKS L+R I LI SG+V + G+ + K+
Sbjct: 40 VNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELREL 99
Query: 89 -SAKLGVLFQHGALFSSMTVQENISMPIKEHLNLPADLIEHIVHTKIAIVGLPPETANLM 147
K+ ++FQ AL TV EN++ + E +P E + +VGL +
Sbjct: 100 RRKKISMVFQSFALLPHRTVLENVAFGL-EVQGVPRAEREERAAEALELVGLEGW-EHKY 157
Query: 148 PFQLSGGMIKRVSLARALAIDPDLLFLDEPTSGLDPIAAEEFDKLLIKLRHSLGLSVYMI 207
P +LSGGM +RV LARALA+DPD+L +DE S LDP+ E L++L+ L ++ I
Sbjct: 158 PDELSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFI 217
Query: 208 THDLNNLISTCNRVAVIQKKGIMKEGTISDIVDS-NDPWIRSYF 250
THDL+ + +R+A+++ +++ GT +I+ + + ++R +F
Sbjct: 218 THDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNPANDYVREFF 261