HHsearch alignment for GI: 254780140 and conserved domain: COG0840

>COG0840 Tar Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms].

Probab=97.30  E-value=0.015  Score=35.67  Aligned_cols=62  Identities=8%  Similarity=0.172  Sum_probs=29.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             1257789888988999998775532333222333321014567777776554332221112234
Q gi|254780140|r  265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI  328 (452)
Q Consensus       265 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  328 (452)
T Consensus       236 ~~I~~i~~~I~~IAeQTN--LLALNAaIEAARAGE~GrGFaVVAdEVR~LA~~s~~st~~I~~~  297 (408)
T COG0840         236 QEIEEITSVINSIAEQTN--LLALNAAIEAARAGEAGRGFAVVADEVRKLAERSADSAKEIGLL  297 (408)
T ss_pred             HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             789999999999999998--89888999998577678884146998999999989899999999