HHsearch alignment for GI: 254780140 and conserved domain: COG3008
>COG3008 PqiB Paraquat-inducible protein B [General function prediction only].
Probab=99.16 E-value=2.9e-10 Score=89.69 Aligned_cols=111 Identities=17% Similarity=0.216 Sum_probs=81.4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCCCCC-CEEEEEEEEEEEEEEEEECCCCCEEE
Q ss_conf 32789999999999999999999986254446776189999971875676689-80789007433798888648886079
Q gi|254780140|r 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHS 81 (452)
Q Consensus 3 ~~~~~~~vG~fvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~v~GL~~g-spV~~~Gv~VG~V~~I~l~~~~~~~v 81 (452)
T Consensus 18 r~~SpiWllPivA----l~igawL~~~---~~~~~G~~Itl~f-~saeGIeaGKT~Iry~gvdVG~V~~v~LsdDl-~~V 88 (553)
T COG3008 18 RRISPIWLLPIVA----LLIGAWLLFQ---HVQDRGPEITLTF-ESAEGIEAGKTPIRYQGVDVGVVTDIKLSDDL-KGV 88 (553)
T ss_pred CCCCCHHHHHHHH----HHHHHHHHHH---HHHHCCCEEEEEE-CCCCCCCCCCCEEEECCEEEEEEEEEEECCCC-CCE
T ss_conf 5778068999999----9999999999---9970497599995-47666214860588513136678898853676-616
Q ss_pred EEEEEECCCC--CCCCCCEEEEEE-----------CCCCHHHHHHCCCCCCCCC
Q ss_conf 9999974897--246884699974-----------2321023321014653221
Q gi|254780140|r 82 LAKALIRPDT--PLYPSTTATIRT-----------QGLAGITYIELSTLRKEKK 122 (452)
Q Consensus 82 ~v~~~i~~~~--~i~~~~~~~i~~-----------~~l~g~~~i~~~~~~~~~~ 122 (452)
T Consensus 89 ~V~a~i~~da~~~L~~dT~FWvVkPr~slaGiSGLdtLlSG~YI~lqPG~~~~~ 142 (553)
T COG3008 89 EVTAQINSDAKDLLREDTRFWVVKPRASLAGISGLDTLLSGNYIGLQPGKKGEA 142 (553)
T ss_pred EEEEEECHHHHHHHHCCCEEEEEECCCCCCCCCCCCHHHCCCEEEECCCCCCCC
T ss_conf 999996864888753285799982564545665400231473488667888886