HHsearch alignment for GI: 254780140 and conserved domain: pfam00015
>pfam00015 MCPsignal Methyl-accepting chemotaxis protein (MCP) signaling domain. This domain is thought to transduce the signal to CheA since it is highly conserved in very diverse MCPs.
Probab=97.46 E-value=0.0099 Score=36.95 Aligned_cols=71 Identities=6% Similarity=0.147 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 5444444310125778988898899999877553233322233332101456777777655433222111223
Q gi|254780140|r 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327 (452)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (452)
T Consensus 30 ~~i~~L~~~s~~I~~i~~~I~~IA~QTNLL--ALNAaIEAARAGE~GrGFAVVA~EVR~LA~~t~~st~~I~~ 100 (213)
T pfam00015 30 ETMEELETSSKKISDIISVIDEIAFQTNLL--ALNAAIEAARAGEQGRGFAVVADEVRKLAERSAQAAKEIEA 100 (213)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999998999999999899988898--99999999750668996088999999999988899999999