BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780140|ref|YP_003064553.1| putative ABC transporter,
substrate-binding protein [Candidatus Liberibacter asiaticus str.
psy62]
(452 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|254780140|ref|YP_003064553.1| putative ABC transporter, substrate-binding protein [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039817|gb|ACT56613.1| putative ABC transporter, substrate-binding protein [Candidatus
Liberibacter asiaticus str. psy62]
Length = 452
Score = 249 bits (633), Expect = 8e-64, Method: Composition-based stats.
Identities = 452/452 (100%), Positives = 452/452 (100%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF
Sbjct: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE
Sbjct: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI
Sbjct: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN
Sbjct: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF
Sbjct: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS
Sbjct: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN
Sbjct: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
HFDDCLNNFERNPQDIVWGREKGSVKIYKPKH
Sbjct: 421 HFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
>gi|86357962|ref|YP_469854.1| putative ABC transporter protein [Rhizobium etli CFN 42]
gi|86282064|gb|ABC91127.1| putative ABC transporter protein [Rhizobium etli CFN 42]
Length = 456
Score = 241 bits (614), Expect = 1e-61, Method: Composition-based stats.
Identities = 136/453 (30%), Positives = 234/453 (51%), Gaps = 8/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQVGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++I + A E +RA+I A S + ++ A+ + +D+ +Q IE+ PLT T
Sbjct: 120 EESILKHAIENGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIEDSRAPLTQTF 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPH-----SSDSKNTFNTITDLITSLDKMIKAID 235
N ET S LA N +ID + + + S +T + L+ ++D
Sbjct: 180 KNAETFSDALAKNSDNIDAFLQSVGELSNTVKAVSGRVDSTLQAVESLVRAVDAQKIDNI 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ +I N+ +S + + + T + + Q ++D L++
Sbjct: 240 VSNAEKITANVADASGDLKGAIQKFDETATTFNDFGKQAQATLDRVDTLVAQIDPAKIKG 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ D+ + S ++ +++ I TI + + + LN +S + ++ K
Sbjct: 300 SVDDISQATKDARVAVASIRDVANTVSLRQKDIDQTIQDVSQLANKLNSASTRVDGILIK 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++ + SLF +A+ + +F+ ++ +N I I +NLQ FS +GL D+Q L+ +
Sbjct: 360 VDALLGTDNTQSLFAEARETLESFKKVADNLNSRIGPIADNLQKFSSAGLRDVQTLINDM 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ TV++ +D ++NF+RNPQ +++G + +VK Y
Sbjct: 420 RGTVSNLNDTISNFDRNPQRLIFGGD--TVKQY 450
>gi|209549576|ref|YP_002281493.1| hypothetical protein Rleg2_1982 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209535332|gb|ACI55267.1| Mammalian cell entry related domain protein [Rhizobium
leguminosarum bv. trifolii WSM2304]
Length = 456
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 141/455 (30%), Positives = 241/455 (52%), Gaps = 12/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++I Q A + +RA+I A S + ++ A+ + +D+ +Q IE+ PLT T
Sbjct: 120 EESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIEDSRAPLTQTF 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N ET S LA N +ID + + S+ K + + +++ ++KA+D +K++
Sbjct: 180 KNAETFSDALAKNSGNIDAFLQSVG--ELSNTVKAVSGRVDSTLQAVESLVKAVDAKKID 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV-------GQKIDHLLSDFSSKMK 293
I+ N + N +S + + +T TF + ++D L++
Sbjct: 238 NIVSNADKITANVADASGDLKGAIQKFDQTATTFNDFGKQAQATLDRVDTLVAQIDPAKV 297
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ D+ + + S ++ +++ I TI + + + LN +S + ++
Sbjct: 298 KGSVDDIAQATKDARAAVASIRDVANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGIL 357
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
K++ + SLF +A+ + +F+ ++ +N I I +NLQ FS GL D+Q LV
Sbjct: 358 IKVDALLGTDNTQSLFTEARDTLESFKKVADNLNARIGPIADNLQKFSSGGLRDVQTLVN 417
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
++ TVN+ +D + NF+RNPQ +++G + +VK Y
Sbjct: 418 DMRGTVNNLNDTITNFDRNPQRLIFGGD--TVKQY 450
>gi|190892033|ref|YP_001978575.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
CIAT 652]
gi|190697312|gb|ACE91397.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
CIAT 652]
Length = 456
Score = 240 bits (612), Expect = 3e-61, Method: Composition-based stats.
Identities = 135/453 (29%), Positives = 233/453 (51%), Gaps = 8/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++I Q A + +RA+I A S + ++ A+ + +D+ +Q I++ PLT T
Sbjct: 120 EESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIQDSRAPLTQTF 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPH-----SSDSKNTFNTITDLITSLDKMIKAID 235
N ET S LA N +ID + + + S +T + L+ ++D
Sbjct: 180 KNAETFSDALAKNSDNIDAFLQSVGELSNTVKAVSGRVDSTLEAVESLVKAVDAQKIDHI 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ +I N+ +S + + + T + + Q+ ++D L++
Sbjct: 240 VSNAERITANVADASGDLKGAIQKFDETATTFNDFGKQAQDTLDRVDTLVAQIDPAKLKG 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ D+ + + S ++ +++ I TI + + + LN +S + ++ K
Sbjct: 300 SVDDISQATKDARAAIASIRDVANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGILIK 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++ + S+F A+ + +F+ ++ +N I I +NLQ FS GL D+Q LV +
Sbjct: 360 VDALLGTDNTQSMFAQARETLESFKKVADNLNSRIGPIADNLQKFSSGGLRDVQTLVNDM 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ TVN+ +D + NF+RNPQ +++G + +VK Y
Sbjct: 420 RGTVNNLNDTITNFDRNPQRLIFGGD--TVKQY 450
>gi|327190642|gb|EGE57730.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
CNPAF512]
Length = 456
Score = 240 bits (611), Expect = 3e-61, Method: Composition-based stats.
Identities = 135/453 (29%), Positives = 233/453 (51%), Gaps = 8/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++I Q A + +RA+I A S + ++ A+ + +D+ +Q I++ PLT T
Sbjct: 120 EESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIQDSRAPLTQTF 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPH-----SSDSKNTFNTITDLITSLDKMIKAID 235
N ET S LA N +ID + + + S +T + L+ ++D
Sbjct: 180 KNAETFSDALAKNSDNIDAFLQSVGELSNTVKAVSGRVDSTLEAVESLVKAVDAQKIDHI 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ +I N+ +S + + + T + + Q+ ++D L++
Sbjct: 240 VSNAERITANVADASGDLKGAIQKFDETATTFNDFGKQAQDTLDRVDTLVAQIDPAKLKG 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ D+ + + S ++ +++ I TI + + + LN +S + ++ K
Sbjct: 300 SVDDISQATKDARAAVASIRDVANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGILIK 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++ + S+F A+ + +F+ ++ +N I I +NLQ FS GL D+Q LV +
Sbjct: 360 VDALLGTDNTQSMFAQARETLESFKKVADNLNSRIGPIADNLQKFSSGGLRDVQTLVNDM 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ TVN+ +D + NF+RNPQ +++G + +VK Y
Sbjct: 420 RGTVNNLNDTITNFDRNPQRLIFGGD--TVKQY 450
>gi|241204913|ref|YP_002976009.1| Mammalian cell entry related domain protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240858803|gb|ACS56470.1| Mammalian cell entry related domain protein [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 456
Score = 240 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 141/455 (30%), Positives = 244/455 (53%), Gaps = 12/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++I Q A + +RA+I A S + ++ A+ + +D+ +Q IE+ PLT T
Sbjct: 120 EESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIEDSRGPLTETF 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N ET S LA N +ID + + S+ K + + + +++ ++KA+D QK++
Sbjct: 180 KNAETFSDALAKNSGNIDAFLQSVG--ELSNTVKAVSSRVDSTLQAVESLVKAVDAQKID 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV-------GQKIDHLLSDFSSKMK 293
I+ N + + N +S + + +T TF + ++D L++
Sbjct: 238 NIVSNAEKITANVADASGDLKGAIQKFDQTATTFNDFGKQAQATLDRVDTLVAQIDPAKV 297
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ D+ + + S ++ +++ I TI + +++ LN +S + ++
Sbjct: 298 KGSVDDISQATKDARAAVASIREVANTVSARQKDIDQTIQDVSQLSNKLNSASTRIDGIL 357
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
K++ + SLF +A+ + +F+ ++ +N I I +NLQ FS GL D+Q LV
Sbjct: 358 IKVDALLGTDNTQSLFTEARDTLESFKKVADNLNSRIGPIADNLQKFSSGGLRDVQTLVN 417
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
++ TV++ +D + NF+RNPQ +++G + +VK Y
Sbjct: 418 DMRGTVSNLNDTITNFDRNPQRLIFGGD--TVKQY 450
>gi|222086198|ref|YP_002544730.1| ABC transporter protein [Agrobacterium radiobacter K84]
gi|221723646|gb|ACM26802.1| ABC transporter protein [Agrobacterium radiobacter K84]
Length = 456
Score = 240 bits (610), Expect = 4e-61, Method: Composition-based stats.
Identities = 132/453 (29%), Positives = 236/453 (52%), Gaps = 8/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F + ++ +F +YW++ + GPM E+++RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTLLVIAAAFGFVYWMAEYGR-GGPMVELVVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + GL +D + PN+SLA +R D P+Y ST A + QGL G YIELS R
Sbjct: 60 NGIQVGSVQGLSIDADDPNYSLAFTEVRADAPVYTSTKAILEIQGLTGAAYIELSGGRNG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I + + + +RA++ A S + ++ A+ + +D+ IQ + + PLT T+
Sbjct: 120 DENILKRSVDTGKRAVLLADQSSVTNLLNTADKILNRANDTIGDIQGFVSDSRAPLTDTV 179
Query: 181 ANIETISTVLANNISHIDKMMHTT-----QVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
N +T S L++N +IDK + + S+ +T + L+ ++D
Sbjct: 180 RNAQTFSKALSDNSDNIDKFLASMGQLSDTFKNVSTRIDSTLEAVEKLVRAVDANKINEV 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ N+I N+ ++ + + T Q Q+ ++D +++
Sbjct: 240 VNNANKITANVADATTDLKATVAAFKQTADTYNAFGQKAQQTLDRVDAIVAQIDPAKLKG 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ D+ + + S + ++Q I TI +I+ LN +S K ++SK
Sbjct: 300 SVDDITQVTKDARAAVTSIREVANSVAARQQDIDQTIANARSISEKLNSASGKVDGVLSK 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++++ + SLF +A+ + +F+ ++ +N I I +NLQ FS SGL+++Q L+ +
Sbjct: 360 VDSLLGSGDTQSLFAEAKDTLTSFKKMADNLNARIGPIADNLQKFSSSGLSNVQTLINDM 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ TV++ + + NF+RNPQ +++G + +VK Y
Sbjct: 420 RGTVDNLNSTITNFDRNPQRLLFGGD--TVKQY 450
>gi|116252405|ref|YP_768243.1| solute-binding component of ABC transporter [Rhizobium
leguminosarum bv. viciae 3841]
gi|115257053|emb|CAK08147.1| putative solute-binding component of ABC transporter [Rhizobium
leguminosarum bv. viciae 3841]
Length = 456
Score = 239 bits (609), Expect = 6e-61, Method: Composition-based stats.
Identities = 141/455 (30%), Positives = 243/455 (53%), Gaps = 12/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++I Q A + +RA+I A S + ++ A+ + +D+ +Q IE+ PLT T
Sbjct: 120 EESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIEDSRGPLTETF 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N ET S LA N +ID + + S+ K + + +++ ++KA+D QK++
Sbjct: 180 KNAETFSDALAKNSGNIDAFLQSVG--ELSNTVKAVSGRVDSTLQAVESLVKAVDAQKID 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV-------GQKIDHLLSDFSSKMK 293
I+ N + + N +S + + +T TF + ++D L++
Sbjct: 238 NIVSNAEKITANVADASGDLKGAIQKFDQTATTFNDFGKQAQATLDRVDTLVAQIDPAKV 297
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ D+ + + S ++ +++ I TI + +++ LN +S + ++
Sbjct: 298 KGSVDDIAQATKDARAAVASIRDVANTVSARQKDIDQTIQDVSQLSNKLNSASTRIDGIL 357
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
K++ + SLF +A+ + +F+ ++ +N I I +NLQ FS GL D+Q LV
Sbjct: 358 IKVDALLGTDNTQSLFTEARNTLESFKKVADNLNSRIGPIADNLQKFSSGGLRDVQTLVN 417
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
++ TV++ +D + NF+RNPQ +++G + +VK Y
Sbjct: 418 DMRGTVSNLNDTITNFDRNPQRLIFGGD--TVKQY 450
>gi|227822229|ref|YP_002826200.1| putative solute-binding component of ABC transporter [Sinorhizobium
fredii NGR234]
gi|227341229|gb|ACP25447.1| putative solute-binding component of ABC transporter [Sinorhizobium
fredii NGR234]
Length = 456
Score = 239 bits (608), Expect = 7e-61, Method: Composition-based stats.
Identities = 137/455 (30%), Positives = 231/455 (50%), Gaps = 12/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG F V ++ +F +YW+S+ + G M E+++ IPGS +GLS S VRF
Sbjct: 1 METKANYAIVGFFTVFVIAAAFGFVYWMSQYGR-SGEMVELVVNIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L +D P +S+A + D P+ ST AT+ QGL G YIELS RK
Sbjct: 60 NGINVGSVRSLAIDANDPRYSIAITEVSADAPVLKSTKATLEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I + A E +A I A S + ++ A+ + + + IQ + + PLT TI
Sbjct: 120 DENILKSALENGTQARILADQSSVTSLLATADQILDRANSAIGDIQGFVTEVRGPLTATI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N + S LA+N ID+ + + Q S + D + S D++IK++D +K++
Sbjct: 180 GNAQRFSKALADNSDAIDQFLKSVQ--ELSGSVSAASKKLDDTLASADRLIKSVDPKKID 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQ-------TFQEVGQKIDHLLSDFSSKMK 293
I+ N++ SN+ +S V + R T QE +++D L++ ++
Sbjct: 238 TIVSNVEDVSNDLKAASGGVSEAIAGFRRTVDTYDQFGKNAQETLKRVDALVAAVDTQKV 297
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ AD+ +I+ +++ I TI +++ LN +S + ++
Sbjct: 298 GLVVNDISAASADARKVAAQVSEFANKISARQEDIDQTITDFTEMSNKLNAASNRVDSIL 357
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
K++ SL +A+ + +FR ++ +N I I +NL+ FS SGL D++ LV
Sbjct: 358 VKVDGFLGDANAPSLSAEARSTLESFRRMADNLNAQIGPIADNLKRFSNSGLRDVETLVT 417
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ + TV ++NF+RNPQ +++G E +VK Y
Sbjct: 418 ETRRTVQSLQSTISNFDRNPQRLLFGGE--TVKQY 450
>gi|15965584|ref|NP_385937.1| hypothetical protein SMc00176 [Sinorhizobium meliloti 1021]
gi|15074765|emb|CAC46410.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
Length = 458
Score = 239 bits (607), Expect = 9e-61, Method: Composition-based stats.
Identities = 139/455 (30%), Positives = 237/455 (52%), Gaps = 12/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG F V ++ +F +YW+S+ + G M E+++ IPGS +GLS S VRF
Sbjct: 3 METKANYAIVGFFTVLVIAAAFGFVYWMSQYGRT-GQMVELVVNIPGSANGLSVGSPVRF 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L +D P +S+A + D P+ STTAT+ QGL G YIELS RK
Sbjct: 62 NGINVGSVRNLAIDANDPRYSIAITEVSADAPVMKSTTATLEVQGLTGAAYIELSGGRKG 121
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I + A E+ +A I A S + ++ A+ + + + IQ + ++ PLT+TI
Sbjct: 122 DENILKTALEKGTQAHILADQSSVTSLLATADQILDRANSAITDIQSFVTDVRGPLTSTI 181
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N E S LA+N ID+ + + + S ++ + D + S D++IK++D +K++
Sbjct: 182 GNAERFSKALADNSGAIDQFLKSVEQLSGSVNAA--SKKLDDTLASADRLIKSVDPKKID 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTF-------QEVGQKIDHLLSDFSSKMK 293
I+ N + SNN +S V + R T +T+ QE +++D L++ ++
Sbjct: 240 NIVSNAEQVSNNLKDASGGVSEAIAGFRRTVETYDQFGKSAQETLKRVDTLVAAVDAQKV 299
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ AD+ +I+ ++ I TI +++ LN +S + ++
Sbjct: 300 GLVVNDITAASADARKVAAQVSDFAEKISARQDDIDQTITDFTQMSNKLNAASNRVDSIL 359
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
KI+ + SL A+ + +FR +E +N + I NL+ FS SGL D++ LV
Sbjct: 360 VKIDGFLGDADAPSLSAQARETLESFRRVAENLNAQLGPIAENLKRFSNSGLRDVEALVG 419
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ TV + +++F++NPQ +++G E +VK Y
Sbjct: 420 DTRRTVQSLQNTISDFDKNPQRLLFGGE--TVKQY 452
>gi|307302704|ref|ZP_07582460.1| Mammalian cell entry related domain protein [Sinorhizobium meliloti
BL225C]
gi|307318552|ref|ZP_07597986.1| Mammalian cell entry related domain protein [Sinorhizobium meliloti
AK83]
gi|306895892|gb|EFN26644.1| Mammalian cell entry related domain protein [Sinorhizobium meliloti
AK83]
gi|306903068|gb|EFN33659.1| Mammalian cell entry related domain protein [Sinorhizobium meliloti
BL225C]
Length = 456
Score = 239 bits (607), Expect = 1e-60, Method: Composition-based stats.
Identities = 139/455 (30%), Positives = 237/455 (52%), Gaps = 12/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG F V ++ +F +YW+S+ + G M E+++ IPGS +GLS S VRF
Sbjct: 1 METKANYAIVGFFTVLVIAAAFGFVYWMSQYGRT-GQMVELVVNIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L +D P +S+A + D P+ STTAT+ QGL G YIELS RK
Sbjct: 60 NGINVGSVRNLAIDANDPRYSIAITEVSADAPVMKSTTATLEVQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I + A E+ +A I A S + ++ A+ + + + IQ + ++ PLT+TI
Sbjct: 120 DENILKTALEKGTQAHILADQSSVTSLLATADQILDRANSAITDIQSFVTDVRGPLTSTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N E S LA+N ID+ + + + S ++ + D + S D++IK++D +K++
Sbjct: 180 GNAERFSKALADNSGAIDQFLKSVEQLSGSVNAA--SKKLDDTLASADRLIKSVDPKKID 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTF-------QEVGQKIDHLLSDFSSKMK 293
I+ N + SNN +S V + R T +T+ QE +++D L++ ++
Sbjct: 238 NIVSNAEQVSNNLKDASGGVSEAIAGFRRTVETYDQFGKSAQETLKRVDTLVAAVDAQKV 297
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ AD+ +I+ ++ I TI +++ LN +S + ++
Sbjct: 298 GLVVNDITAASADARKVAAQVSDFAEKISARQDDIDQTITDFTQMSNKLNAASNRVDSIL 357
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
KI+ + SL A+ + +FR +E +N + I NL+ FS SGL D++ LV
Sbjct: 358 VKIDGFLGDADAPSLSAQARETLESFRRVAENLNAQLGPIAENLKRFSNSGLRDVEALVG 417
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ TV + +++F++NPQ +++G E +VK Y
Sbjct: 418 DTRRTVQSLQNTISDFDKNPQRLLFGGE--TVKQY 450
>gi|163759628|ref|ZP_02166713.1| ABC transporter, substrate binding protein [Hoeflea phototrophica
DFL-43]
gi|162283225|gb|EDQ33511.1| ABC transporter, substrate binding protein [Hoeflea phototrophica
DFL-43]
Length = 456
Score = 238 bits (606), Expect = 1e-60, Method: Composition-based stats.
Identities = 120/455 (26%), Positives = 224/455 (49%), Gaps = 12/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG F V ++ +F +YW++R G ++++RIPGS +GLS S V F
Sbjct: 1 METRANYAIVGFFTVLVMVSAFGFVYWMARYGGT-GDTTQLVVRIPGSANGLSVGSPVHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGIP G + L +D PN +A ++R D P+Y T A + QGL G YIEL
Sbjct: 60 NGIPYGVVRRLNIDPNSPNFVIADTVVRSDAPIYTDTRAALEIQGLTGSAYIELQGGTPS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I A + A+I A PSG+ ++ A+ +++ ++ +E PLT T+
Sbjct: 120 NPNILDQAISDSGVAVIEADPSGVTNLLATADEILTRVNRVIGEVEGFVEEARSPLTGTL 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N E+ S L++N ID+ + + S ++ + + S +++I A+D +V
Sbjct: 180 RNAESFSAALSDNADGIDEFLKSVS--ALSGTVQSLSVKLEGTLGSAERLINAVDPDQVR 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV-------GQKIDHLLSDFSSKMK 293
I+ ++ + + SS +I T+ +R T Q+ ++ K+D +++
Sbjct: 238 NIVSSVDKVTGDLAASSGDIIKTLESLRGTAQSLEQFVTDAGASLDKVDAVIASVDPAKV 297
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ AD+ + + +++ I ++ ++ LN +S++ ++
Sbjct: 298 GEVMDNITVASADARQTLADARGVAETFGARKEDFDLIITDVKEMSGRLNAASERVDGVL 357
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
+K++ + +SL DA+ + +FR+ + +N I I +NLQ FS SGL D++ LV
Sbjct: 358 AKLDGFLGEGDASSLIADAEETLKSFREVANSLNARIGPIADNLQRFSGSGLRDVEALVN 417
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ++ + + + ER+PQ +++G E +VK Y
Sbjct: 418 DARRSIQRIEQSITSIERDPQRLLFGGE--TVKQY 450
>gi|150396762|ref|YP_001327229.1| hypothetical protein Smed_1552 [Sinorhizobium medicae WSM419]
gi|150028277|gb|ABR60394.1| Mammalian cell entry related domain protein [Sinorhizobium medicae
WSM419]
Length = 458
Score = 237 bits (603), Expect = 3e-60, Method: Composition-based stats.
Identities = 138/455 (30%), Positives = 234/455 (51%), Gaps = 12/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG F V ++ +F +YW+S+ + G M ++++ IPGS +GLS S VRF
Sbjct: 3 METKANYAIVGFFTVLVIAAAFGFVYWMSQYGRT-GQMVQLVVNIPGSANGLSVGSPVRF 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L +D P +S+A + D P+ STTAT+ QGL G YIELS RK
Sbjct: 62 NGINVGSVRNLAIDANDPRYSIAITEVSADAPVMKSTTATLEVQGLTGAAYIELSGGRKG 121
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I + A ER +A I A S + ++ A+ + + + IQ + ++ PLT+TI
Sbjct: 122 DENILKTALERGTQAHILADQSSVTSLLATADQILDRANSAITDIQSFVTDVRGPLTSTI 181
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N E S LA+N ID+ + + + S ++ + D + D++IKA+D +K+
Sbjct: 182 GNAERFSKALADNSDAIDQFLESVEQLSGSVNAA--SKKLDDTLAGADRLIKAVDPKKIE 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQ-------TFQEVGQKIDHLLSDFSSKMK 293
I+ N + SNN +S +V TV + T + Q+ +++D L++ S+
Sbjct: 240 NIVGNAEQVSNNLKNASGEVTETVASFQRTLETYNQFGKNAQQTLERVDALVAAVDSQKV 299
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ AD+ +I+ ++ I TI +++ LN +S + ++
Sbjct: 300 GLVVNDITAASADARKVAAQVSDFAEKISARQGDIDQTITDFTQMSNKLNAASGRVDSIL 359
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
KI+ + SL A+ + +FR +E +N + I NL+ FS SGL D++ L+
Sbjct: 360 VKIDGFLGDADAPSLSAQARETLESFRRVAENLNAQLGPIAENLKRFSNSGLRDVEALIG 419
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ TV + ++ F++NPQ +++G E +VK Y
Sbjct: 420 DTRRTVQGLQNTISEFDKNPQRLLFGGE--TVKQY 452
>gi|15888955|ref|NP_354636.1| ABC transporter, substrate binding protein [Agrobacterium
tumefaciens str. C58]
gi|15156734|gb|AAK87421.1| ABC transporter, substrate binding protein [Agrobacterium
tumefaciens str. C58]
Length = 456
Score = 236 bits (600), Expect = 7e-60, Method: Composition-based stats.
Identities = 129/453 (28%), Positives = 233/453 (51%), Gaps = 8/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG+F + ++ +F +YW++ + GP A++++RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGIFTLIVIAAAFGFVYWMAEFGR-GGPTAQLVVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGIPVG + GL +D++ P +S+A ++ D P++PST A + QGL G YIELS K+
Sbjct: 60 NGIPVGTVRGLAIDRDDPAYSIAFTEVQADAPVFPSTRAVLEIQGLTGAAYIELSGGNKD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I Q + E A +TA S + ++ A+ K+ + +Q +++ PLT T+
Sbjct: 120 GERILQKSVESGVPAELTADLSSVTNLLATADKILKRADGAIGELQGFVQDARGPLTQTV 179
Query: 181 ANIETISTVLANNISHIDKMMHTT-----QVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
N E S LA N I + + V S T + +L+ ++D
Sbjct: 180 RNAEKFSDALAANSDGIKNFIASLSSLSTTVQSVSVRLDGTLTAVENLVKAVDAGKIDSI 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
L V+++ +++ +S++ + V +T + + Q V ++ D LL+ S
Sbjct: 240 LSNVDKVTKDVASASSDIQGIMETVQSTARNFEAASTEVQTVVKRADELLASVDPAKVST 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
AD+ + + ++ +R I ++ + LN +S + +++K
Sbjct: 300 VVGDVSAATADARDAVANFKRIADDVGARRADIDQAVSDFTEMGRKLNLASSRVDGILAK 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++ + + NSLF A+ + +F+ ++ +N I I +NL FS SGL D Q L+
Sbjct: 360 VDGMLGTDDANSLFAKARETLTSFKAVADNLNARIGPIADNLTRFSSSGLKDFQALIGST 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
++TV++ ++ + N +R+PQ +++G E +VK Y
Sbjct: 420 RQTVDNLNNAITNIDRDPQRLIFGGE--TVKQY 450
>gi|325293032|ref|YP_004278896.1| ABC transporter substrate-binding protein [Agrobacterium sp. H13-3]
gi|325060885|gb|ADY64576.1| ABC transporter, substrate binding protein [Agrobacterium sp.
H13-3]
Length = 456
Score = 235 bits (598), Expect = 1e-59, Method: Composition-based stats.
Identities = 130/453 (28%), Positives = 234/453 (51%), Gaps = 8/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG+F + ++ +F +YW++ + GP A++++RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGIFTLIVIAAAFGFVYWMAEFGR-GGPTAQLVVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGIPVG + GL +D++ P +S+A ++ D P++PST A + QGL G YIELS K+
Sbjct: 60 NGIPVGTVRGLAIDRDDPAYSIAFTEVQADAPVFPSTRAVLEIQGLTGAAYIELSGGNKD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I Q + E A +TA S + ++ A+ K+ + +Q +++ PLT T+
Sbjct: 120 GERILQKSVESGVPAELTADLSSVTNLLATADKILKRADGAIGELQGFVQDARGPLTQTV 179
Query: 181 ANIETISTVLANNISHIDKMMHTT-----QVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
N E S LA N I + + V S T + DL+ ++D
Sbjct: 180 RNAEKFSDALAANSDGIKSFIASLSSLSTTVQSVSVRLDGTLTAVEDLVKAVDAGKIDSI 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
L V+++ +++ +S++ + V +T + + Q V ++ D LL+ S
Sbjct: 240 LSNVDKVTKDVASASSDIQGIMETVQSTARNFEAASTEVQTVVKRADELLASVDPAKVST 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
AD+ + + ++ +R I ++ ++ LN +S + +++K
Sbjct: 300 VVGDVSAATADARDAVANFKRIADDVGARRADIDQAVSDFTDMGRKLNLASSRVDGILAK 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++ + + NSLF A+ + +F+ ++ +N I I +NL FS SGL D Q L+
Sbjct: 360 VDGMLGTDDANSLFAKARETLTSFKAVADNLNARIGPIADNLTRFSSSGLKDFQALIGST 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
++TV++ ++ + N +R+PQ +++G E +VK Y
Sbjct: 420 RQTVDNLNNAITNIDRDPQRLIFGGE--TVKQY 450
>gi|222148409|ref|YP_002549366.1| ABC transporter substrate binding protein [Agrobacterium vitis S4]
gi|221735397|gb|ACM36360.1| ABC transporter substrate binding protein [Agrobacterium vitis S4]
Length = 455
Score = 234 bits (595), Expect = 2e-59, Method: Composition-based stats.
Identities = 135/455 (29%), Positives = 241/455 (52%), Gaps = 13/455 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VGLF + ++ +F +YW++ + GPM+ + IRIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGLFTLLVILAAFGFVYWMAEYGR-GGPMSPLTIRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G +V L +D++ P S+A+ ++ D P+ +T A + QGL G Y+E+S
Sbjct: 60 NGIQIGSVVSLSIDRDDPAFSIAETQVQQDAPIRSNTKAALEVQGLTGAAYVEMSGGVGG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A E + A++ A S + ++ A+ K+ D+ ++Q + + PLT T+
Sbjct: 120 DDLLKK-AQETGKTAVLVADQSSLTNLLATADKIMKRADDAIANVQGFVADARGPLTNTM 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N ET S LA+N ID + + S + + + + ++KA+D KVN
Sbjct: 179 RNAETFSKALADNADGIDTFLKSVS--ALSDTITGLSGRLDSTLAAAEDLLKAVDRNKVN 236
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV-------GQKIDHLLSDFSSKMK 293
QIL N + + +SD+V V + T +TF + +++ L++ ++
Sbjct: 237 QILTNAETFTGKIADASDKVGVAVDNFSATAKTFNDFGVKAEGTLGQVNALIAAIDTQKV 296
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
S+ + D+ S + S D++ I I+ +++ LN++S + ++
Sbjct: 297 SRVVDDVSVAVTDARSAAANVQSVTETFKDRKPDIDQAISDFTQLSNRLNNASTRVDGIL 356
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
+K++ + + NSL +A+R + + R ++ +N+ I I +NL FS SGL DIQ LV
Sbjct: 357 AKVDALLGSDDTNSLSAEAKRTLQSIRAVADNLNQKIGPIADNLSKFSSSGLKDIQTLVN 416
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ TV + DD ++NF+R+PQ +++G + +VK Y
Sbjct: 417 DTRSTVKNLDDTISNFDRDPQRLIFGGD--NVKQY 449
>gi|315122742|ref|YP_004063231.1| putative ABC transporter, substrate-binding protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496144|gb|ADR52743.1| putative ABC transporter, substrate-binding protein [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 448
Score = 225 bits (571), Expect = 1e-56, Method: Composition-based stats.
Identities = 273/452 (60%), Positives = 352/452 (77%), Gaps = 4/452 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME KNYYT+VG F +SIL SF+SIYWLSR++QY+GP E+IIRIPGSV+GL+ +SSVRF
Sbjct: 1 MEVKNYYTAVGFFAISILLLSFYSIYWLSRNDQYNGPTTELIIRIPGSVEGLAVNSSVRF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGIP+G + GLF+D++ P++S+A+ L+R D PLYPST A I+ QG+ G+TYIELST R E
Sbjct: 61 NGIPIGHVTGLFVDKDNPHYSMAQTLVRVDVPLYPSTKAMIKAQGITGMTYIELSTERTE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
T+FQ AT+ + AMITA PSGIN+ +S AE+T KI+ SS IQKII N + PL I
Sbjct: 121 NYTLFQTATKEKKIAMITAIPSGINHLLSTAEDTLNKINVSSDQIQKIINNADNPLNRII 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N ETIST+L +N+S +DKM+H + + D T + +D ITSL+K IKA+D+QK+N
Sbjct: 181 KNFETISTILVDNVSDLDKMIH--RKNNVAVDFTKTLSNTSDFITSLNKTIKAVDIQKIN 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
QI+ENIQV SNNF+KSSDQV NT++D++ETT TFQ VG+K DHLLSD SS++ SKE F
Sbjct: 239 QIIENIQVVSNNFIKSSDQVTNTINDLQETTHTFQGVGKKADHLLSDVSSQIHSKEAFDF 298
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
ENI++S+SN+R+S SAIREITD QKII TI+TIE +T NLN+SS K ELM+ IN+ +
Sbjct: 299 WENISESSSNIRNSTSAIREITDHSQKIILTIDTIEKMTENLNNSSIKLKELMTTINSFT 358
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ SL +DAQ+A+ +F++T+EKIN YIP I NLQNFS SGL D+QNL+R LQETV
Sbjct: 359 DSEGKKSLIEDAQKAIRSFQNTTEKINEYIPPIAKNLQNFSNSGLYDLQNLIRNLQETVG 418
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
HFDD L+NFERNPQ+I+WG+E +VK YKPKH
Sbjct: 419 HFDDSLSNFERNPQNIIWGKE--TVKQYKPKH 448
>gi|110633895|ref|YP_674103.1| hypothetical protein Meso_1542 [Mesorhizobium sp. BNC1]
gi|110284879|gb|ABG62938.1| Mammalian cell entry related protein [Chelativorans sp. BNC1]
Length = 458
Score = 220 bits (560), Expect = 3e-55, Method: Composition-based stats.
Identities = 110/454 (24%), Positives = 209/454 (46%), Gaps = 8/454 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F +YW + + A + RIPGS GL T S+V F
Sbjct: 1 METKANYVIVGIFTIVAILAAFGFVYWTAGVGN-NSNTAPIRFRIPGSAAGLVTGSAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA-GITYIELSTLRK 119
NG+ VG + ++LD P ++A A + P+ PST A + L G I+L+
Sbjct: 60 NGVRVGTVERVYLDGNNPGIAIADARVDRTAPITPSTKADVGLASLTTGQANIDLTGGNP 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
++ + +A E+ A++TA PS ++ + +A++ + ++ + + PLT T
Sbjct: 120 QEPKLITLAEEQGTIAVMTANPSAVSNLLQSAQSLMSRADSVVGELENFVSDARGPLTQT 179
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSS-----DSKNTFNTITDLITSLDKMIKAI 234
+ N+E S LA N ID + S ++T ++ +LI S+D+ +
Sbjct: 180 VRNVEAFSNALARNSEGIDNFLANVGELSESISGVSGQLESTLSSAEELINSVDRNEISK 239
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
++ + E + S F + V + + + + E Q++D L++ +
Sbjct: 240 IVENLGTFTERLGDVSGQFDTIATGVNDALGSLSSFSTQAGETLQRVDRLVAGIDPDQLT 299
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ S F E ++D+ I I + S LN +S + +++
Sbjct: 300 ETLSNFEEASQAINKASAEIAEVAETVSDRTDDIDQFITDARELASRLNAASVRVDGVLA 359
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
K++ + E LF +A + FR T++ +N + I + L FS GL D++ LV
Sbjct: 360 KLDGMLGSGEGQDLFAEASSTLRAFRQTADTLNARLGPITDGLTRFSGQGLRDVEALVGD 419
Query: 415 LQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ++ + +++ E+NPQ I+ G + G+++ Y
Sbjct: 420 ARRAISRIESAVSDLEQNPQRIITGGD-GTIRRY 452
>gi|260463970|ref|ZP_05812166.1| Mammalian cell entry related domain protein [Mesorhizobium
opportunistum WSM2075]
gi|259030345|gb|EEW31625.1| Mammalian cell entry related domain protein [Mesorhizobium
opportunistum WSM2075]
Length = 457
Score = 218 bits (554), Expect = 1e-54, Method: Composition-based stats.
Identities = 105/453 (23%), Positives = 201/453 (44%), Gaps = 7/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG+F + + +F +YW + G + +RIPGS GL S V F
Sbjct: 1 METRANYVIVGIFTLVAILAAFGFVYWTAAIGD-RGETTLLRVRIPGSASGLGRGSFVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + +++D + P ++A I TP+ ST A I GL G IEL +
Sbjct: 60 NGVKVGDVKRVYIDVDNPTVAIADTEIDRMTPITKSTQADIGLAGLTGQANIELKGADPK 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS + + A+N + ++ +++ PLT T+
Sbjct: 120 EVKLLDQAEKEGKVAEIVANPSAVTNLLQTAQNIFNRADKVLSELEGFTKDVRGPLTQTV 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPH-----SSDSKNTFNTITDLITSLDKMIKAID 235
N++T S LA N IDK + + S T L+ ++DK
Sbjct: 180 KNVQTFSDALAKNSDGIDKFLSSVSALSDELKGVSGKLDGTLKAAEGLLNAVDKDKIKSI 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ V+ + N++ +S V V V + + Q K+D +L
Sbjct: 240 VANVDTVTANLKQTSQQLDGVIKNVDTAVGSVNDFAKQTQGTLAKVDGVLDGIDPAQVRT 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + ++ + ++ I TI + + LND+S + ++++
Sbjct: 300 ALANIQKASENANKAAADIAVVTNKFANRADDIDQTIKDAKQLARRLNDASVRVDGILAR 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++ + + + + DA+ + +F+ ++ +N + I +NL FS GL +++ LV+
Sbjct: 360 VDKLLGSGQADGVMADARATLKSFKQVADTLNARLGVITDNLARFSGQGLTNVEALVQDS 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ++N ++ + + RNPQ I+ G + G V+ +
Sbjct: 420 RRSINRIEEAVTDLSRNPQRILSGGD-GEVRQF 451
>gi|13470957|ref|NP_102526.1| hypothetical protein mll0798 [Mesorhizobium loti MAFF303099]
gi|14021700|dbj|BAB48312.1| mll0798 [Mesorhizobium loti MAFF303099]
Length = 457
Score = 218 bits (553), Expect = 2e-54, Method: Composition-based stats.
Identities = 104/453 (22%), Positives = 200/453 (44%), Gaps = 7/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG+F + + +F +YW + G + +RIPGS GL S V F
Sbjct: 1 METRANYVIVGIFTLVAILAAFGFVYWTAAIGD-RGETTLLRVRIPGSASGLGRGSFVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + +++D + P ++A I TP+ ST A I GL G IEL +
Sbjct: 60 NGVKVGDVKRVYIDVDNPTVAIADTEIDRLTPITKSTQADIGLAGLTGQANIELKGADPK 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS + + A+N + ++ ++ PLT T+
Sbjct: 120 EVKLLDQAEKEGKVAEIVANPSAVTNLLQTAQNIFSRADKVLSELEGFTRDVRGPLTQTV 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPH-----SSDSKNTFNTITDLITSLDKMIKAID 235
N++T S LA N IDK + + S T L+ ++D+
Sbjct: 180 QNVQTFSDALAKNSDGIDKFLSSVSALSEELKGVSGKLDGTLKAAEGLLNAVDRDKIKSI 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ V+ + N++ +S V V V + + Q K+D +L
Sbjct: 240 VANVDTVTANLKQTSQQLDGVIKNVDTAVGSVNDFAKQTQGTLAKVDGVLDGVDPAQVRA 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + ++ + ++ I TI + + LND+S + ++++
Sbjct: 300 ALANIQKASENANKAAADIAVVTEKFANRADDIDQTIKDAKQLAQRLNDASVRVDGILAR 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++ + + + L DA+ + +F+ ++ +N + I +NL FS GL++++ LV+
Sbjct: 360 VDTLLGSGQADGLMADARDTLKSFKQVADTLNARLGVITDNLARFSGQGLSNVEALVQDS 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ++ ++ + + RNPQ I+ G + G V+ +
Sbjct: 420 RRSITRIEEAVTDLSRNPQRILSGGD-GEVRQF 451
>gi|319783793|ref|YP_004143269.1| hypothetical protein Mesci_4106 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169681|gb|ADV13219.1| Mammalian cell entry related domain protein [Mesorhizobium ciceri
biovar biserrulae WSM1271]
Length = 457
Score = 200 bits (507), Expect = 4e-49, Method: Composition-based stats.
Identities = 105/453 (23%), Positives = 202/453 (44%), Gaps = 7/453 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG+F ++ + +F +YW + G + +RIPGS GL S V F
Sbjct: 1 METRANYVIVGIFTLAAILAAFAFVYWTAAIGD-KGETTLLRVRIPGSASGLGRGSFVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + +++D + P ++A I TP+ ST A I GL G IEL +
Sbjct: 60 NGVKVGDVKRVYIDVDNPTVAIADTEIDRMTPITKSTQADIGLAGLTGQANIELKGADPK 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS + + A+N + ++ +++ PLT T+
Sbjct: 120 EVKLLDQAEKEGKVAEIVANPSAVTNLLQTAQNIFTRADKVLTELEGFTKDVRGPLTQTV 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQV-----TPHSSDSKNTFNTITDLITSLDKMIKAID 235
N++T S LA N IDK + S T L+ ++DK
Sbjct: 180 QNVQTFSDALAKNSDGIDKFLSAASTLADELKGVSGKLDGTLKAAEGLLNAVDKDKIKSI 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ V+ + N++ +S V V V + + Q K+D++L
Sbjct: 240 VANVDAVTGNLKETSKQLDGVIKNVDTAVGSVNDFAKRTQGTLAKVDNVLDGIDPAQVRS 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + + + ++ I TI + + LND+S + +++K
Sbjct: 300 ALANIQKASESADKAAADIAEVTHKFANRADDIDQTIKDAKQLAQRLNDASVRVDGILAK 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
++ + + + + DA+ + +F+ ++ +N + I +NL FS GL++++ LV+
Sbjct: 360 VDTLLGSGQADGVMADARATLKSFKQVADTLNARLGVITDNLARFSGQGLSNVEALVQDS 419
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +++ ++ + + RNPQ I+ G + G V+ +
Sbjct: 420 RRSISRIEEAVTDLSRNPQRILSGGD-GEVRQF 451
>gi|254512617|ref|ZP_05124683.1| mammalian cell entry related domain protein [Rhodobacteraceae
bacterium KLH11]
gi|221532616|gb|EEE35611.1| mammalian cell entry related domain protein [Rhodobacteraceae
bacterium KLH11]
Length = 438
Score = 183 bits (463), Expect = 5e-44, Method: Composition-based stats.
Identities = 72/449 (16%), Positives = 156/449 (34%), Gaps = 13/449 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++ + +F WL++ A + +V GLS V +
Sbjct: 1 METRANYILIGAFTLAGILGAFGFFLWLAKFE-VTRQYAYYDVLF-DNVSGLSAAGGVNY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+PVG+++ L LD++ P+ + + D P+ T A +++ G+ G+ Y+ELS
Sbjct: 59 NGLPVGQVISLNLDEDDPSKVRVRLEVDADIPVTKQTIAQLQSLGVTGVAYVELSGGSPT 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK--IIENIEKPLTT 178
+ + Q + ++R+ I + G + A + ++ + + + +
Sbjct: 119 AERLAQNSVIPSKRSSIQSLLEGAPEVLEQAVTLLENLNSVVDDNNRKAVSDILNNLAGA 178
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ +T++ + + T +T T T K +K
Sbjct: 179 SGKLDKTLADFQSLSSDLGGAAKDIGAFTKRLDTLADTAETTLTTGTDTLKSVKQASEAA 238
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + V + + ++ L + + T+
Sbjct: 239 KTALETANGTLQTAEETLQQDIRPFVERGSKLADHLIVLSEQGSLALGTITETFTNANTT 298
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ A + + + R + E+I N + A + KI+
Sbjct: 299 LASIDSAMEAAKATLASAESAFDAANRVMDQDIASVAEDIRKAANQVAATVANVTEKIDK 358
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
IS D A + D I+ + + +F + GL+ + + Q
Sbjct: 359 IS---------DDILSASQSASDLLGTIDGIVQDNRRQVSDFLRVGLSQFVRFIEESQRL 409
Query: 419 VNHFDDCLNNFERNPQDIVWGREKGSVKI 447
V D ++ ER+P + G + +
Sbjct: 410 VISLDRLVDKVERDPARFLLGTQASEFRQ 438
>gi|260430756|ref|ZP_05784728.1| mammalian cell entry related domain protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260418197|gb|EEX11455.1| mammalian cell entry related domain protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 438
Score = 179 bits (453), Expect = 6e-43, Method: Composition-based stats.
Identities = 69/449 (15%), Positives = 160/449 (35%), Gaps = 13/449 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++ + +F WL++ A + +V GLS V +
Sbjct: 1 METRANYILIGAFTLAGILSAFGFFLWLAKFE-VTRQYAYYDVLF-DNVSGLSAAGGVSY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+PVG+++ L LD + P+ + I D P+ T A +++ G+ G++Y+ELS +
Sbjct: 59 NGLPVGQVIALDLDDDDPSKVRVRLEIDADIPVTTDTIAQLQSLGVTGVSYVELSGGSPD 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK--IIENIEKPLTT 178
+ + Q + +++R+ I + G + A + ++ + + + ++ +
Sbjct: 119 AERLPQFSVIKSKRSAIQSLFEGAPKVLDEAVTLLENLNAVVDDDNRKAVADILDNLASA 178
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ +T++ + T +T T T IK
Sbjct: 179 SGRLDKTLTDFETLSGDLGGAAKEIGAFTKRLDTLADTAETTLTTGTETLDSIKTAADSA 238
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + + + + E + + ++ ++ ++ +
Sbjct: 239 KTALDGANKTLATADQVLEQDIRPFIARGSELADRLIGLSDEASVTMATVNTTFQNANQT 298
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
A + + + + R +I + N ++ + + +I+
Sbjct: 299 LDSVTSAMEAAKGTLTSAERAFDSANRVMDEDVATVAADIRTAANQVAETVSNVTQRIDA 358
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
IS D A + D I+ + + +F + GL V + Q
Sbjct: 359 IS---------ADILSASQSASDLLGTIDGIVQQNRRQVSDFLRVGLPQFVRFVEESQRL 409
Query: 419 VNHFDDCLNNFERNPQDIVWGREKGSVKI 447
V D ++ ER+P + G + +
Sbjct: 410 VISLDRLVDKVERDPARFLLGTQASEFRQ 438
>gi|90417913|ref|ZP_01225825.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337585|gb|EAS51236.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 649
Score = 148 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 92/431 (21%), Positives = 171/431 (39%), Gaps = 9/431 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VGLF + ++ SF +YW + +++RI GSV GL S V F
Sbjct: 1 METKANYVRVGLFTMLVIALSFGFVYW-AIFATSGSERVRLLVRIEGSVTGLQQGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+PVG + L LD P +A + PD P+ ST A I QGL G ++EL + +
Sbjct: 60 NGLPVGSVKALRLDSNNPEVVIATTEVDPDLPIKASTQANIGFQGLTGAAFVELKGGQAD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I A E+ +I A PS + ++ A + + + + + ++ + + TT+
Sbjct: 120 EADIIGEAAEQGTVPVIKANPSDVTDILATARDIADRANSILGQFESLVGTVGPSVETTV 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVT-----PHSSDSKNTFNTITDLITSLDKMIKAID 235
N+ S + + + + SS + + I ++ A+D
Sbjct: 180 ENVAQTSRNIETFTASLAENSDDIDNFLTSLSQLSSSANTVAEELPGAIRQAKNILDAVD 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
V +++N+ S+ SD + + V+ + EVG I + S + +
Sbjct: 240 PASVTTVVDNVAAVSDTLRAQSDNLDSIFASVQTAADSVGEVGDVIRRNTTGIDSFVSNL 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
A + + ++ TI I + N++ ++
Sbjct: 300 GPLAEKATAVADRLDTTLQSANTVVAAIDPAQVSKTIEGISSAAENVSSLAETIGAQKEA 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
IN SA+ ++ ++ R T + SE +++ + S+G N +Q+ V
Sbjct: 360 IN--SAIAGASNAAQNVNRITTTIVERSEDVDKLLASLGPITDNITQASTG-FNEAVASA 416
Query: 416 QETVNHFDDCL 426
+ D
Sbjct: 417 NALIGSVDSAT 427
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 82/199 (41%), Gaps = 3/199 (1%)
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
D V TV + T F E + D LL+ + + +
Sbjct: 447 EQIQSIIDGVERTVQTLDTTLTGFTETRTQFDTLLASIDPGKVNTAVENVSAATGNVAAA 506
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLF 369
S ++ +R+ I + I + + L+ +S + +++ +N + + SL
Sbjct: 507 ADSIAKVANDVGARREDIDAIITNAKTTSEQLSAASGRIDSVVNSVNRVLAGAGDGTSLG 566
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
D RA+ + R ++ I + I NLQ FS GL +++ L+ + TV+ D + +F
Sbjct: 567 VDLARALRSVRGAADSIQTQVTPISANLQRFSGEGLREVRGLISNVNRTVDRIDSAVEDF 626
Query: 430 ERNPQDIVWGREKGSVKIY 448
NP +++G E VK Y
Sbjct: 627 TTNPSRLIYGGE--DVKQY 643
>gi|304391806|ref|ZP_07373748.1| ABC transporter, substrate binding protein [Ahrensia sp. R2A130]
gi|303296035|gb|EFL90393.1| ABC transporter, substrate binding protein [Ahrensia sp. R2A130]
Length = 551
Score = 146 bits (366), Expect = 8e-33, Method: Composition-based stats.
Identities = 83/435 (19%), Positives = 185/435 (42%), Gaps = 13/435 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ VGLF++S L SF +YW D M + +RI G+V GL S V+F
Sbjct: 1 METRANTIVVGLFMLSALVASFALVYWFGAVGDKDR-MQRLDVRIQGAVSGLVEGSIVQF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VGR+ GL D++ P L+ PD PL T ++ +GL+G ++I+L +
Sbjct: 60 NGITVGRVTGLAYDKDDPRFVTVNTLVEPDVPLREDTRVSVGARGLSGGSFIQLEGGTPD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ Q T R+ + PS I + + + ++ +E ++ ++ T+
Sbjct: 120 ALRLVQPNTPRDGVVELKGNPSAFTDIIDQVGSIAVRAEKVVGVLEGFVERNDQVISDTL 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N S LA+N +++ + + Q S + I +T ++ ++ A+D Q V+
Sbjct: 180 INTRKFSKALADNSEGVEQFLASAQSVGVS--LEALSGKIDGTVTRVEAILAAVDPQTVS 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
LEN++ + ++ + + + ++ ++ +++ E +
Sbjct: 238 GTLENVESFTKGLADQRAEIETLIQAAGQAVADVRGATARVGPIIGRIEETVQAVEPARV 297
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
IA+ + + + + + TI+ +E +S++ ++ + +++S I+
Sbjct: 298 RTAIANLDQATARARAVLEV--VDEESVQRTISNVERASSSIVTATGRANDIISAIDA-- 353
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKIN-RYIPSIGNNLQN---FSQSGLNDIQNLVRKLQ 416
+ +L D + A ++ + + +++ + D + +V ++
Sbjct: 354 --ETVKALVADMRVATQNVSTLLAAVDAERVNAAVDDVSKAARAASEAATDARGIVTDVR 411
Query: 417 ETVNHFDDCLNNFER 431
+ + + E+
Sbjct: 412 KVTQPLGERAGDVEK 426
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 78/190 (41%)
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
+ V V D+R TQ + +D + + SK A E D+ +
Sbjct: 354 ETVKALVADMRVATQNVSTLLAAVDAERVNAAVDDVSKAARAASEAATDARGIVTDVRKV 413
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
+ + ++ + + + + LN+SS+K L+ + ++ + + L DA+ +
Sbjct: 414 TQPLGERAGDVEKILTDTTELAARLNESSKKVDALLEQAGDLLGTEGDGGLAADARSTLA 473
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
FR T+ + + I ++ + GL D L+R ++++ D + N + NP ++
Sbjct: 474 EFRRTARNFSGNMAQITGSVTKLADRGLGDTPALIRAATQSLSRLDRVIRNIQDNPSSLI 533
Query: 438 WGREKGSVKI 447
G V+
Sbjct: 534 SGSGGSRVRE 543
>gi|119385046|ref|YP_916102.1| hypothetical protein Pden_2315 [Paracoccus denitrificans PD1222]
gi|119374813|gb|ABL70406.1| Mammalian cell entry related domain protein [Paracoccus
denitrificans PD1222]
Length = 433
Score = 145 bits (363), Expect = 2e-32, Method: Composition-based stats.
Identities = 63/447 (14%), Positives = 153/447 (34%), Gaps = 14/447 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F ++ + W ++ Q D A I P V GL S V F
Sbjct: 1 METKANYVLIGAFTIAGFLGMLLFLMWFAKL-QLDRQFAYYDIYFPE-VSGLGVSSEVLF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++V + L + + DTP+ + A+I QG+ GI + +++ R +
Sbjct: 59 AGLSVGKVVDMQLSPSVNGAVRVRVEVAEDTPVRTDSRASIEIQGVTGIANVAITSGRPD 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + +I A S + +++ + + K++ + + I
Sbjct: 119 SPLLR--DVDPDSIPVIAANRSALQTLSEQGPEMLSRLNTVAEQLTKLLGDENQDRVRNI 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ S+ + + T T + + + + + + L +
Sbjct: 177 LDNVERSSANLD-----KALADVTTATDSIASAASDISAFGERLDGLSAAAETTLGNADT 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + + ++ + + + Q++D + S + A
Sbjct: 232 ALAKFNESAAKVDTALDSGTATLDEVRAYVSGDLKTLTQRLDQTAATLQSDLNRLTERAD 291
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ + S + + +E + ++L + K E + ++
Sbjct: 292 QSLDSLDAALEVGSRTLASAERAFDGADRVINSNVEPVVADLRVTLGKANEAIDRV---- 347
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ + + + A + + + S +Q F++ GL + L+ V
Sbjct: 348 -VADLPEITDRFRNAADSADAAFASLRGMLDSARAPVQAFTREGLPQFTRMASDLRGLVG 406
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKI 447
+ ++ ++ RNP + G +
Sbjct: 407 NVNELVSALRRNPSQVFSGPRVPEFRR 433
>gi|114707111|ref|ZP_01440009.1| putative ABC transporter protein [Fulvimarina pelagi HTCC2506]
gi|114537307|gb|EAU40433.1| putative ABC transporter protein [Fulvimarina pelagi HTCC2506]
Length = 938
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 85/435 (19%), Positives = 178/435 (40%), Gaps = 16/435 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F +++L +F +YW S +++RI GSV GL S V+F
Sbjct: 1 METKANYVRVGIFTITVLALAFGFVYW-SVLATQSTTRVPLLVRITGSVTGLQQGSQVQF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+PVG + L LD P +A + P P+ ST A + L G +YIEL + +
Sbjct: 60 NGLPVGSVQSLELDPNNPRVVIASTTVEPGLPISESTDANLVANPLTGYSYIELRGGQID 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++++ + A E+ A+ITA+PS + + A + +++ ++ + ++ + + +
Sbjct: 120 QESLLEQAQEQGTIAVITASPSEVTDILQTARDIAERANNIMTQFENVVGTVGPSVEASA 179
Query: 181 ANIETISTVLANNISHIDKM-----MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
NI I+ ++ + + ++T + + + D I ++ ++ A+D
Sbjct: 180 QNITDITGNVSAFTDSLADNTDDIDLFIARLTDLAESANTVAQRLPDAIGNVQAILDAVD 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+++ I++N+ +S + ++ + V+ ++G+ I + + +
Sbjct: 240 PAQISTIIDNVSATSVSIRDGAENLTAVTEAVQSAAAGVSQIGETIQRNADGIDAFIGNL 299
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + S + Q++ T++ + SNL S+ +
Sbjct: 300 GPLSQTATSVARQLDTTVSSANEIFAAVDPQQVSDTLSGVSATASNLAAVSETVSNQRES 359
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
I S A M + I I L I L +L
Sbjct: 360 IE---------SAITSASNTMQNIDTVTGTIANRTEQIDALLSRL-DPISESIGTLSTQL 409
Query: 416 QETVNHFDDCLNNFE 430
+T + + +++ E
Sbjct: 410 TDTASRIGEVVSSVE 424
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/209 (19%), Positives = 86/209 (41%), Gaps = 2/209 (0%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ E I S+ D V V + F + ++ID +L++ ++ + S
Sbjct: 725 NLAETIGSKSDTIDSIIDGVDTAVGSLTTALNGFDQTRRQIDSILNEVEPQLVNNAVSNV 784
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI- 359
+ S I ++ +I + + + +S K +++ +N +
Sbjct: 785 SSATNNIARAADSIGRVGDIINKRQDEIDEILTNANITSRQVAAASGKLDTVITSVNGLL 844
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
S L + A+ RDT++ + + + NLQNFS S ++Q+L R+L +TV
Sbjct: 845 SGSDAGRPLGVEVTEALRAIRDTAQSVQGQVGPLSANLQNFSDSTRREVQSLARQLNQTV 904
Query: 420 NHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+++ +P +++G E V+ Y
Sbjct: 905 ERIGRAVDDIADDPSQVIFGGESN-VRTY 932
>gi|118588762|ref|ZP_01546170.1| ABC transporter, substrate binding protein [Stappia aggregata IAM
12614]
gi|118438748|gb|EAV45381.1| ABC transporter, substrate binding protein [Stappia aggregata IAM
12614]
Length = 668
Score = 142 bits (356), Expect = 1e-31, Method: Composition-based stats.
Identities = 80/452 (17%), Positives = 177/452 (39%), Gaps = 19/452 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F+V++L +F +YWL+ + E+ I PG V GL V F
Sbjct: 1 METRANYILIGAFMVAVLIGAFGFVYWLAVTAD-SRQNVELKIVYPGPVTGLPVGGQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L P +A I+P TPL T AT+ GL G+ Y++LS E
Sbjct: 60 NGIKVGDVKSLDFAPGDPTKVVATIGIKPSTPLREDTKATLNFTGLTGVAYVDLSGGSSE 119
Query: 121 KKTIFQIATERNQRAMI--TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ ++++ + A S + + A + K+ + + + ++++ +T
Sbjct: 120 SPLLLSSNEDQDEDNIPVIYAERSFFDDIVDGARDVLKRADSTMKTVDDLLKDNGPAITE 179
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N ET S LA N + M + S + + L+ ++++ A+ K
Sbjct: 180 IVNNAETFSAALAANSDGVKDFM--ASIGKASEAFSSLSARLETLVQEGERILAAVPSDK 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ-------TFQEVGQKIDHLLSDFSSK 291
V I++++ S + K+S + + D + + E ++ ++ + +
Sbjct: 238 VTTIVDDLSKFSASLGKASSDIDLLMADAQSAAKELQTFTVNLNEGLDRVHKIVGAVNPE 297
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
K I ++ Q + + + I N + D Q E
Sbjct: 298 DVQKVVQGAAALGEVLQKRTGDIDKLISSTSETMQNVNAVVENIRNQEGAIKDIVQGGRE 357
Query: 352 LMSKINNISALKENNSLFKD---AQRAMHTFRDTSEKINRYIPSIGNNLQNFS----QSG 404
++ K++ I + D + + ++ +N + + + +
Sbjct: 358 VVVKVDAIMTRGVEIAAAIDPLKVEEVVANVSTFTDNLNASLGKVDELVASVDPEKVSKA 417
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
++++ +++ + ++ + + + Q+
Sbjct: 418 VDNVSSIIDNFNNQQSQINEIIASTKSTVQNF 449
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 32/230 (13%), Positives = 80/230 (34%), Gaps = 15/230 (6%)
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + ++N + S D++ + DV+ + F Q + L+
Sbjct: 429 NNQQSQINEIIASTKSTVQNFEAVSATVRGQDDRIAALITDVQAAAERFATTLQTANDLM 488
Query: 286 SDFSSKMKSKETSAFLEN--------------IADSTSNMRSSISAIREITDQRQKIIST 331
+ + + + + + +++ + +
Sbjct: 489 KAVDPEKVANIVGSVETATSGLANPEDGIPAILESARKAADNVQRMTDDLSKRTPDVDQI 548
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
I+ + +T+ LN +S + L+ K++ + + L K+A A R +
Sbjct: 549 ISDAKQMTATLNSTSVRVESLVEKVSTMV-DGDGEGLIKEATLAAQAIRKVAVAFESRAD 607
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+I L F+ G D + ++ T+ +FER+P +++G E
Sbjct: 608 AIAGGLSKFATQGSADFAAALAQVNRTLISIQRAAESFERSPNRVIFGGE 657
>gi|254503068|ref|ZP_05115219.1| mce related protein [Labrenzia alexandrii DFL-11]
gi|222439139|gb|EEE45818.1| mce related protein [Labrenzia alexandrii DFL-11]
Length = 667
Score = 141 bits (354), Expect = 2e-31, Method: Composition-based stats.
Identities = 95/456 (20%), Positives = 193/456 (42%), Gaps = 13/456 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F+++ LF +F IYWL+ + + EV I PG+V GL V F
Sbjct: 1 METRANYILIGAFMIATLFSAFGFIYWLAVTAE-SRQNVEVKILFPGAVTGLPVGGQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L P LA IRP TPL T AT+ GL G+ Y++L
Sbjct: 60 NGIKVGDVSSLDFAPGDPTKVLATVRIRPSTPLREDTKATLNFTGLTGVAYVDLIGGTSS 119
Query: 121 KKTI--FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + N +I A S + + A + K+ + + + +++++ ++
Sbjct: 120 SPLLLNPDGSQTPNNIPLINAERSFFDDIVDGARDVLKRADSTMKTVDQLLQDNGPVISK 179
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
TI N+ET S LA N + M + S + + L+ ++++ A+ K
Sbjct: 180 TIQNVETFSDALAANSDGVKDFM--ASIGKASDAFSSLSTRLEGLVDEGERLLAAVPSDK 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
V I++++Q S + K+S + + D + + E ++++ L + S +++ +
Sbjct: 238 VTAIVDDLQAFSGSLGKASTDIDTLMADAQNAAKELTEFTERLNDGLGNVQSIVQAVKPE 297
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ + + + +I + +T+ + NI L ++++ +
Sbjct: 298 DIEKVMKGAAALGEVLEKRSGDIDELVVATSNTMQGVNNIVEMLRAREGTINDVITGTRD 357
Query: 359 ISALKENNSLFK-DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR--KL 415
I + + + R ++I + ++ L N S +++I V +
Sbjct: 358 IVGKVDAIVTRGVEIAAVIDPLR--VDEIVASVATLTEGL-NISLVRVDEIIASVDPATI 414
Query: 416 QETVNHFDDCLNNFERNPQDI--VWGREKGSVKIYK 449
ETV+ ++NF I + K +++ ++
Sbjct: 415 GETVDSVASIVDNFNNQQSQINEIIASTKSTIQNFE 450
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/237 (15%), Positives = 83/237 (35%), Gaps = 16/237 (6%)
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + ++N + S D++ V DV+ + F Q D LL
Sbjct: 429 NNQQSQINEIIASTKSTIQNFEAVSATVRGQDDRIAALVEDVQVAAERFASTLQSADELL 488
Query: 286 SDFSSKMKSKETSAFLEN-------------IADSTSNMRSSISAIREITDQRQKIISTI 332
+ + + + + + +++ + + I
Sbjct: 489 RAVDPEKIANIVGSVETAASGLAGEDGIPAILQSARQAADNVQQMTADLSKRTPDVDQII 548
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ +T+ LN +S + L+ K++ + + L K+A A R + +
Sbjct: 549 TDAQQMTATLNSTSVRVESLVEKVSEMV-DGDGEGLIKEATLAAQAIRKVAVAFESRADA 607
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
I L F+ G D+ + + + T+ +FE++P +++G E V Y+
Sbjct: 608 IAGGLSKFATQGSADLTSALAQFNRTLVSIQRAAQSFEQSPNRVIFGGE--DVPTYQ 662
>gi|328543114|ref|YP_004303223.1| ABC transporter, substrate binding protein [Polymorphum gilvum
SL003B-26A1]
gi|326412860|gb|ADZ69923.1| ABC transporter, substrate binding protein [Polymorphum gilvum
SL003B-26A1]
Length = 549
Score = 140 bits (352), Expect = 4e-31, Method: Composition-based stats.
Identities = 77/432 (17%), Positives = 162/432 (37%), Gaps = 16/432 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G FV+ ILF +F IYWL+ + V + PG V GL V F
Sbjct: 1 METRANYVLIGGFVLGILFAAFVFIYWLAATVD-SRQSVNVKVIFPGPVTGLPIGGQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L DQ P +A + P+ PL AT+ QGL G+ Y++L E
Sbjct: 60 NGIKIGDVGSLDFDQTDPQVVIATIRVNPNAPLRRDIRATLGFQGLTGVAYVDLKGGSTE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ Q E S + + N + KK + + +++ ++ +
Sbjct: 120 TPLLIQPDMESEPVIYADR--SFFDDILENGRDVLKKADTTLDTLNSVLQESRPAISEIV 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N+ET S LA N ++ M + + + + L+ ++++ A+ KV
Sbjct: 178 RNVETFSKALAENADGVEGFMASVGKATEAF--SSLSGRMEGLVEQGERILAAVPSDKVE 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+++ N+ + + + + + V + T Q+ ++++ + + +K+
Sbjct: 236 EMVGNVTDFTASLKEIAPDIRQMVAEAESATANLQQFTERLNAGMDGVEAVIKAVR---- 291
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN-I 359
D + + + + + ++ + I + N+ S I+ I
Sbjct: 292 ---PEDVEKAVAGAGALGAVLEKRSAELDTLIASTGETMDNIRSVSSSIRAREEDISAFI 348
Query: 360 SALKENNSLFKDAQRAMHTFRDTSE--KINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+ ++ + K++ + S+ S G I+ + +
Sbjct: 349 AGARDVVGKIGTGVERTTEVVQAIDPQKVSNIVASVEEVTGKLSGQG-EAIEATIASARN 407
Query: 418 TVNHFDDCLNNF 429
+ +
Sbjct: 408 AAGTIEKMSADL 419
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 59/138 (42%), Gaps = 1/138 (0%)
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
IA + + + +++ + + I + I +NLN +S + E++SK+ +
Sbjct: 402 IASARNAAGTIEKMSADLSARTADVDQIITDAKQIATNLNAASARVDEIVSKVGTMV-DG 460
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ +A RA R +E I + L F+ G D+ + ++ T
Sbjct: 461 DGEGFIVEATRAAEAIRKVAEAFESRADGIASGLSKFANQGTADLTAALGQVNRTFVSIQ 520
Query: 424 DCLNNFERNPQDIVWGRE 441
+ NF+RNP +++G E
Sbjct: 521 RAVENFDRNPNRVIFGGE 538
>gi|159044592|ref|YP_001533386.1| hypothetical protein Dshi_2048 [Dinoroseobacter shibae DFL 12]
gi|157912352|gb|ABV93785.1| hypothetical protein Dshi_2048 [Dinoroseobacter shibae DFL 12]
Length = 579
Score = 140 bits (350), Expect = 6e-31, Method: Composition-based stats.
Identities = 76/460 (16%), Positives = 160/460 (34%), Gaps = 43/460 (9%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +GLF + + +R D A IR SV GLS S VRF
Sbjct: 1 METRANYILIGLFTLLGILGMMAFFLLFARVE-LDRQFAYYDIRFS-SVSGLSEASDVRF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+PVG++V + L E + + + DTP+ + ATI QG+ G++++ +S
Sbjct: 59 SGLPVGQVVDVRLAPEQDGSIVVRVEVNADTPVRTDSVATIEAQGVTGVSFVGISGGTP- 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ AT+ + E ++ + + ++ L +
Sbjct: 118 DAPLLVAATDAQVPEIEAGRSVLQTLSEDAPELITEALQIVQEVSALLTDDNRNLLRNIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N E S A+ + + + T N + L +
Sbjct: 178 VNTEAASEEFASALENFSGVADTVNAFADQISRFNATLDTLTGEINDVLSTADTTLASIG 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQ-TFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ E + + + + +++ + + ++ L++D ++ + T
Sbjct: 238 ALSEETRRMVLDGEEVLSTLDDSLGAAQTYIEGDLAGATEEARALMADLRAQADTLGT-- 295
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
++ + + + T + + T+ ++ + ++L +S + + +I+ +
Sbjct: 296 ------EAAALIEGFGATGDVATARLTEFAGTLAAVDRLVASLEATSGEVQVAVRRIDGL 349
Query: 360 SALK------ENNSLFKDAQRAMH---------------TFRDTSEKINRYIPSIGNNLQ 398
A + E +L AQ AM R ++ R + +G NL
Sbjct: 350 VAEEGAPLLSETRALVATAQAAMEAVNAVATVDMPAIVADIRAATDTTTRVVAEVGENLS 409
Query: 399 NFSQ----------SGLNDIQNLVRKLQETVNHFDDCLNN 428
S S L D+ R ET+ + +
Sbjct: 410 GASGRVEALIVSAHSTLADVTTTFRNANETLTAVNTAMET 449
Score = 46.1 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 68/201 (33%), Gaps = 9/201 (4%)
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
++ + V D+R T T V ++ LS S ++++ SA +T+ ++
Sbjct: 379 ATVDMPAIVADIRAATDTTTRVVAEVGENLSGASGRVEALIVSAHSTLADVTTTFRNANE 438
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL---------KENN 366
+ T + TS S+ +++ + + ++
Sbjct: 439 TLTAVNTAMETGDSALRAAESAFTSADRVMSEDLDGVIAALESTLGSLTGAVDSVAEDLP 498
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
+ D + A ++ + G L+ F+ +GL L ++ + V + D
Sbjct: 499 LISSDLRSASDAAARAFAEVEALAEAAGPRLETFATTGLPLYSRLAQEARVLVENLDRLT 558
Query: 427 NNFERNPQDIVWGREKGSVKI 447
N R+P + +
Sbjct: 559 NQISRDPARFILNPNTPEFRR 579
>gi|218458932|ref|ZP_03499023.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
Kim 5]
Length = 296
Score = 139 bits (349), Expect = 7e-31, Method: Composition-based stats.
Identities = 102/295 (34%), Positives = 161/295 (54%), Gaps = 3/295 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++I Q A + N+RA+I A S + ++ A+ + +D+ +Q IE+ PLT T
Sbjct: 120 EESILQHAIDNNKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIEDSRAPLTQTF 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N ET S LA N +ID + + S K + + +++ ++KA+D QK++
Sbjct: 180 KNAETFSDALAKNSDNIDAFLQSVG--ELSDTVKAVSGRVDSTLQAVESLVKAVDAQKID 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+I+ N + + N +S + + ET TF + G++ L + +
Sbjct: 238 RIVSNAERITANVADASGDLRGAIQKFDETATTFNDFGKQAQATLDRVDTLVAQI 292
>gi|114764123|ref|ZP_01443362.1| Putative ABC transporter, periplasmic substrate-binding protein
[Pelagibaca bermudensis HTCC2601]
gi|114543481|gb|EAU46496.1| Putative ABC transporter, periplasmic substrate-binding protein
[Roseovarius sp. HTCC2601]
Length = 579
Score = 138 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/434 (14%), Positives = 154/434 (35%), Gaps = 19/434 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++ + W + Q D A I P V GLS S VRF
Sbjct: 1 METRANYVLIGAFTLAGFLAMLAAFMWFANI-QLDRQFAYYDIDFPT-VSGLSDASDVRF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+PVG++V + L E + I DTP+ + ATI QG+ G++Y+ +S E
Sbjct: 59 SGLPVGQVVDVRLSPERDGTVRVRIEIGADTPVRADSVATIEAQGVTGVSYVGISAGTPE 118
Query: 121 KKTIFQIATERNQRAMITAT--PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ +++ + + S T + + D + + + +
Sbjct: 119 APLLSEVSDDDVPNIEAGQSVLQSLTEDAPLLVSETLRAVQDVRQLFGDENQAKVQSILD 178
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
I + ++ S + + T ++ + T D + ++
Sbjct: 179 NIEDSSVAFAQALDDFSAVGGSVATFADQIDRFNNTLDSVSRDASATLADVREAVVSVRD 238
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+++ + ++ +D I + R T +++ ++D ++ +
Sbjct: 239 LSEEARGVLEQGGGTLERADSAIGSAE--RYVTDQLGPATEQLQRSVADIETRFAAL--- 293
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ + + T + + T+ + +++ + + ++
Sbjct: 294 -----SDSAGGLVETFTETGETATQRLTEARETLTATNEMIASIGATMESVDGAAQSVDT 348
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRY----IPSIGNNLQNFSQSGLNDIQNLVRK 414
+ + + +L + + A E++ +P+I ++++ + + + +
Sbjct: 349 LI-VGDGTALVAELREATAQATRVIEEVGAVAETDLPAIIADIRSATDTASGVVSRVGED 407
Query: 415 LQETVNHFDDCLNN 428
L DD N
Sbjct: 408 LSSASGQLDDLARN 421
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 42/374 (11%), Positives = 98/374 (26%), Gaps = 3/374 (0%)
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + N++L L A + + L+ L +
Sbjct: 199 GSVATFADQIDRFNNTLDSVSRDASATLADVREAVVSVRDLSEEARGVLEQGGGTLERAD 258
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ P+ S A+ ++ + S + E T T E
Sbjct: 259 SAIGSAERYVTDQLGPATEQLQRSVADIETRFAALSDSAGGLVETFTETGETATQRLTEA 318
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI-LE 244
T+ A N V + + + + A + + ++
Sbjct: 319 RETLTATNEMIASIGATMESVDGAAQSVDTLIVGDGTALVAELREATAQATRVIEEVGAV 378
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
V + ++D L + + S + N
Sbjct: 379 AETDLPAIIADIRSATDTASGVVSRVGEDLSSASGQLDDLARNAGETLDSVRVTFTNAND 438
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
S N I ++ + E + A+L + + ++ E
Sbjct: 439 TLSAINAALEIGDRALRAAEQAFQGADRVMNEEVAGIAESLRATLAQLETAVAEVAG--E 496
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
+ ++ + A + + +I + + F+ L L + + +N+ DD
Sbjct: 497 VPGVTEELRAASRSAQAAFAEIETAVGQSAPAVSAFATDALPQFGRLAVETRTLINNLDD 556
Query: 425 CLNNFERNPQDIVW 438
+ R+P +
Sbjct: 557 LVERLGRDPGRFLL 570
>gi|307945711|ref|ZP_07661047.1| ABC transporter, periplasmic substrate-binding protein [Roseibium
sp. TrichSKD4]
gi|307771584|gb|EFO30809.1| ABC transporter, periplasmic substrate-binding protein [Roseibium
sp. TrichSKD4]
Length = 667
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 87/452 (19%), Positives = 174/452 (38%), Gaps = 19/452 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F+V L +F IYWL+ + + I P V GL V F
Sbjct: 1 METRANYVVIGAFMVGTLALAFGFIYWLALTAETREN-VFFDIVFPAPVTGLPVGGQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L D+ P +A ++PDTPL T AT+ GL G+ Y++L+ +
Sbjct: 60 NGIKVGDVSQLNFDRTDPTKVVATVRVKPDTPLRKDTKATLNFTGLTGVAYVDLNGGSLD 119
Query: 121 KKTIFQIATERNQ--RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+F + R +I A S + A + KI + ++ ++ + +T
Sbjct: 120 SPLLFTGYENLGEGPRPVIYAEKSLFDDITGGARDVLHKIETTLDEVEGLLVDNRPAITK 179
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ET ST LA+N + M + + + L+ ++++ AI K
Sbjct: 180 IVTNVETFSTALASNSDGVSDFMASLSSATEAF--VKLSGRMETLVVEGERILAAIPSDK 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV-------GQKIDHLLSDFSSK 291
V I++N+ V +++ K + + D + Q ++ + +++ + +
Sbjct: 238 VTDIVDNVDVFTDSLGKVGKDIEVVLADAQSAAQELEKFSVGLNAQLDSVGKIVAAVNPE 297
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ S + I + + S TI NL + +
Sbjct: 298 DVQQVVSGAASLGKVLKDRTSEINTLISASSTTMDNLASVSTTIREQDQNLVAAIESGKG 357
Query: 352 LMSKINNISALKENNSLF---KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS----QSG 404
++ K + + A Q+ + + + +N + + + QS
Sbjct: 358 VLEKADVMMARGIEIVDAVDPASVQQTVASVESFTTNLNASLGRVDAIVAAVDPVSVQSV 417
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
++D +V + ++ + + Q+I
Sbjct: 418 VDDTAEIVSNFRAQEAQINEIITATRSSIQNI 449
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 61/139 (43%), Gaps = 1/139 (0%)
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
I + + ++ + + + I + +T+NLN +S + ++ + +
Sbjct: 521 ILSARATAQNVEKMSENLASRTPDVDQIITDAKQLTANLNATSVRIQGIVDNVGTMV-DA 579
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ L K+A A + R +E +I + L F+ G +D + ++ T+
Sbjct: 580 DGEGLIKEATAAAASIRKIAEAFESRAGTIADGLAKFANQGSSDFAAAMEQVNRTLISIQ 639
Query: 424 DCLNNFERNPQDIVWGREK 442
+ +F+RNPQ +++G E+
Sbjct: 640 RAVESFDRNPQRVIFGGEQ 658
>gi|170748372|ref|YP_001754632.1| hypothetical protein Mrad2831_1954 [Methylobacterium radiotolerans
JCM 2831]
gi|170654894|gb|ACB23949.1| Mammalian cell entry related domain protein [Methylobacterium
radiotolerans JCM 2831]
Length = 360
Score = 137 bits (344), Expect = 3e-30, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 165/448 (36%), Gaps = 92/448 (20%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ F ++ WLS V I GSV GLS SSV F
Sbjct: 1 METRANYALIGAFTIAVILAGFGTVLWLSG-GSSRQVSQLVRIVFSGSVGGLSRGSSVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + + L + P LA + P TPL T A + + L G++ I LS +
Sbjct: 60 NGIKVGEVTDIRLAPQDPRRVLATIKVDPATPLRADTRARLDSAMLTGVSVISLSGGNAD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ +A + I A S + ++ A +++ D + +++ E + ++
Sbjct: 120 APVLTPMA--NGEPPTIFADSSDMQDMMALARQVAQRADDMLARLDRLVSANEGAINRSL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+ET S LA+ +I ++ KA+D K+
Sbjct: 178 ANVETFSKTLADAGPNISALV------------------------------KAVDGAKLG 207
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++++N S K+S + +HD R KID +L+ S + S
Sbjct: 208 RVIDNADRFSAALSKASPDIEAGLHDARLLAGKLSASADKIDAVLNGAESFLGS------ 261
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
++ +E + +I + ++ + S+ + + I
Sbjct: 262 ---------------ASGQEGSSTFAEIRAAAISVRDAGKAFRTMSENLDKRTASI---- 302
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
S R + ++ S G T++
Sbjct: 303 ----------------------SANFGRLSGTGRREVEALSGDGQ-----------RTLS 329
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ + + ER+P +++G K S+ Y
Sbjct: 330 TLNRTVRSLERDPSQVIFGG-KPSLPEY 356
>gi|218679529|ref|ZP_03527426.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
CIAT 894]
Length = 177
Score = 135 bits (339), Expect = 1e-29, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 108/178 (60%), Gaps = 1/178 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+++I Q A + +RA+I A S + ++ A+ + +D+ +Q I++ PLT
Sbjct: 120 EESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIQDSRAPLTQ 177
>gi|218513900|ref|ZP_03510740.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
8C-3]
Length = 255
Score = 134 bits (336), Expect = 3e-29, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 121/204 (59%), Gaps = 1/204 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG F V ++ +F +YW++ + GPM E+I+RIPGS +GLS S VRF
Sbjct: 1 METKANYTIVGFFTVLVIAAAFGFVYWMAEYGR-GGPMTELIVRIPGSANGLSVGSPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L +D + P +SLA +R D P+YPST A + QGL G YIELS RK
Sbjct: 60 NGIQIGSVQTLSIDADDPQYSLAFTQVRTDAPIYPSTKAALEIQGLTGAAYIELSGGRKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++I Q A + +RA+I A S + ++ A+ + +D+ +Q I++ PLT T
Sbjct: 120 EESILQHAIDNGKRAVIVADQSSVTNLLATADKILDRANDAVGELQGFIQDSRAPLTQTF 179
Query: 181 ANIETISTVLANNISHIDKMMHTT 204
N ET S LA N +ID + +
Sbjct: 180 KNAETFSDALAKNSDNIDAFLQSV 203
>gi|188580087|ref|YP_001923532.1| Mammalian cell entry related domain protein [Methylobacterium
populi BJ001]
gi|179343585|gb|ACB78997.1| Mammalian cell entry related domain protein [Methylobacterium
populi BJ001]
Length = 360
Score = 133 bits (334), Expect = 5e-29, Method: Composition-based stats.
Identities = 82/448 (18%), Positives = 155/448 (34%), Gaps = 92/448 (20%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F + ++ +F ++WL ++ + I GSV GL+ S+V F
Sbjct: 1 METRANYVLIGAFTIGVVLAAFGFVFWLQGGSR-GQATQALRIVFSGSVGGLAKGSTVSF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + + L + P +A + P TPL T A + + L G++ I LS +
Sbjct: 60 NGIKVGEALDVRLLPQDPRRVVAVVQVDPSTPLRADTRARLDSAMLTGVSQIALSGGSAD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ + S I ++ A+ +++ D + + K++ E + T+
Sbjct: 120 APALTPGSGDKMPTIFADS--SDIQDMMAAAKQIAQRADDVLQRLDKVVAGNEGAINRTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+E S LA I ++ K++D Q++N
Sbjct: 178 ANVEAFSKTLAEAGPSIAGLV------------------------------KSVDGQRLN 207
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+++EN S SS + +HD RE +ID +L + S
Sbjct: 208 RVIENADTFSTALANSSPDIEAGLHDARELAAKLSASADRIDGVLKGAEGFLGSASGQQG 267
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
A+ S A +
Sbjct: 268 AGTFAEIREAAISVRDAGKAFR-------------------------------------- 289
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+L ++ + + +++ L Q T+N
Sbjct: 290 ------TLSENLDKRTANISTSFNRLSGTSRREVEALS--------------SDGQRTLN 329
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ER+P +++G K S+ Y
Sbjct: 330 TLSRAARSLERDPSQVIFGG-KPSLPEY 356
>gi|163850326|ref|YP_001638369.1| hypothetical protein Mext_0893 [Methylobacterium extorquens PA1]
gi|254559577|ref|YP_003066672.1| ABC transporter periplasmic protein [Methylobacterium extorquens
DM4]
gi|163661931|gb|ABY29298.1| Mammalian cell entry related domain protein [Methylobacterium
extorquens PA1]
gi|254266855|emb|CAX22654.1| putative ABC transporter, periplasmic protein [Methylobacterium
extorquens DM4]
Length = 360
Score = 132 bits (330), Expect = 1e-28, Method: Composition-based stats.
Identities = 89/448 (19%), Positives = 160/448 (35%), Gaps = 92/448 (20%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F + ++ +F ++WL ++ + I GSV GL+ S+V F
Sbjct: 1 METRANYVLIGAFTIGVVLAAFGFVFWLQGGSR-GQATQALRIVFSGSVGGLAKGSTVSF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + + L + P +A + P TPL T A + + L G++ I LS +
Sbjct: 60 NGIKVGEALDVRLLPQDPRRVVAIVQVDPSTPLRADTRARLDSAMLTGVSQIALSGGSAD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ + S I ++ A+ +++ D + + K++ E +T T+
Sbjct: 120 APALTPGSGDKMPTIFADS--SDIQDMMAAAKQIAQRADDVLQRLDKVVAGNEGAITRTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+E+ S LA I ++ K++D Q++N
Sbjct: 178 ANVESFSKTLAEAGPSIAGLV------------------------------KSVDGQRLN 207
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+++EN + S SS + +HD R KID +L + S
Sbjct: 208 RVIENAETFSTALANSSGDIQAGLHDARSLAAKLNASADKIDGVLKGAEGFLGSASGQQG 267
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
A+ S A R S+ + + I
Sbjct: 268 AGTFAEIREAAISVRDAGR---------------------AFRALSENLDKRTANI---- 302
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
S NR + ++ S G Q T+N
Sbjct: 303 ----------------------STSFNRLSGTSRREVEALSSDG-----------QRTLN 329
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ER+P +++G K S+ Y
Sbjct: 330 TLSRAARSLERDPSQVIFGG-KPSLPEY 356
>gi|218528883|ref|YP_002419699.1| hypothetical protein Mchl_0853 [Methylobacterium chloromethanicum
CM4]
gi|240137397|ref|YP_002961868.1| putative ABC transporter, periplasmic protein [Methylobacterium
extorquens AM1]
gi|218521186|gb|ACK81771.1| Mammalian cell entry related domain protein [Methylobacterium
chloromethanicum CM4]
gi|240007365|gb|ACS38591.1| putative ABC transporter, periplasmic protein [Methylobacterium
extorquens AM1]
Length = 360
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 88/448 (19%), Positives = 159/448 (35%), Gaps = 92/448 (20%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F + ++ +F ++WL ++ + I GSV GL+ S+V F
Sbjct: 1 METRANYVLIGAFTIGVVLAAFGFVFWLQGGSR-GQATQALRIVFSGSVGGLAKGSTVSF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + + L + P +A + P TPL T A + + L G++ I LS +
Sbjct: 60 NGIKVGEALDVRLLPQDPRRVVAIVQVDPSTPLRADTRARLDSAMLTGVSQIALSGGSAD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ + S I ++ A+ +++ D + + K++ E + T+
Sbjct: 120 APALTPGSGDKMPTIFADS--SDIQDMMAAAKQIAQRADDVLQRLDKVVAGNEGAINRTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+E+ S LA I ++ K++D Q++N
Sbjct: 178 ANVESFSKTLAEAGPSIAGLV------------------------------KSVDGQRLN 207
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+++EN + S SS + +HD R KID +L + S
Sbjct: 208 RVIENAETFSTALANSSGDIQAGLHDARSLAAKLNASADKIDGVLKGAEGFLGSASGQQG 267
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
A+ S A R S+ + + I
Sbjct: 268 AGTFAEIREAAISVRDAGR---------------------AFRALSENLDKRTANI---- 302
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
S NR + ++ S G Q T+N
Sbjct: 303 ----------------------STSFNRLSGTSRREVEALSSDG-----------QRTLN 329
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ER+P +++G K S+ Y
Sbjct: 330 TLSRAARSLERDPSQVIFGG-KPSLPEY 356
>gi|254470341|ref|ZP_05083745.1| putative periplasmic binding protein for ABC transporter
[Pseudovibrio sp. JE062]
gi|211960652|gb|EEA95848.1| putative periplasmic binding protein for ABC transporter
[Pseudovibrio sp. JE062]
Length = 645
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/429 (18%), Positives = 168/429 (39%), Gaps = 10/429 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++G FV++++ +F +WL + ++ I PG+V GL V F
Sbjct: 1 METRANNIAIGAFVLTVVGIAFLFTFWLLSAGDRSSRR-DIKIIFPGAVTGLPIGGQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L D E P +A + + PL T A++ GL G+ Y++LS E
Sbjct: 60 NGIKIGDVSALTYDAENPKLVVATVRVDANAPLRRDTVASLGFTGLTGVAYVDLSGGSSE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+F AT + ++ A S + A++ +K + HI +++ N + + TI
Sbjct: 120 SPPLFSKAT--DTVPVMYARRSQFEDLLEGAKDIMRKADSTLTHIDELVMNAQPDVQKTI 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N+E + LANN +D + S I +L+ D ++ + K+
Sbjct: 178 QNVEVFTQALANNAKGVDDFLSGVT--ETSKALTGLSGKIGNLVDRGDDLLANVPPDKLG 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
QI+ N++ +N S+D V + + + + +++ L + + +
Sbjct: 236 QIVTNVESMTNKLSASTDGVGEIIANGKLASDQLVNFTTELNDELEQLEKVIAAVKPEEV 295
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ ++ +I +T L + + ++ N +
Sbjct: 296 GRILKGASDLGGVLTERRGDINTMLSSASVVAENARELTVELTKNKEAIDRIVK--NAET 353
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
A E ++A R + + S++++ + S+ + S I +
Sbjct: 354 ASNEIVLTTQNANRILSMVK--SDQVSSIVTSVEKVTKTLSDKDQV-IAKAIDDAGAATA 410
Query: 421 HFDDCLNNF 429
+ + N
Sbjct: 411 NIREVSNTI 419
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 84/206 (40%), Gaps = 1/206 (0%)
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ N+ +S+ ++ D + + + +D + +++T
Sbjct: 434 REVGTNLSAASDQLSETMDNANTLISNTNGIVEAIDPAKVSNIVASADKVATTLAEKTPE 493
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
+ I + + +S E+ + + I+ ++I +NLN +S + ++ K++ +
Sbjct: 494 LSKAIDEIGNAAKSVNDMTTELKKKVPDVDKVIDQAKSIATNLNAASVRVNTILEKVDGM 553
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
+ K+A A + R ++ + I L SQ G D +++L +T+
Sbjct: 554 V-SADGQGFIKEATDAAASIRKVADAFAKRAEPISLALLKLSQQGGQDFTAAMQQLNQTL 612
Query: 420 NHFDDCLNNFERNPQDIVWGREKGSV 445
+NNF+RNP +++G V
Sbjct: 613 IEIRRAVNNFDRNPNRVIFGGSDTPV 638
>gi|254449438|ref|ZP_05062875.1| mammalian cell entry related domain protein [Octadecabacter
antarcticus 238]
gi|198263844|gb|EDY88114.1| mammalian cell entry related domain protein [Octadecabacter
antarcticus 238]
Length = 579
Score = 131 bits (328), Expect = 2e-28, Method: Composition-based stats.
Identities = 67/454 (14%), Positives = 152/454 (33%), Gaps = 25/454 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +GLF ++ + S + W +R D A +R SV GLS S VRF
Sbjct: 1 METRANHILIGLFTLAGIVGSIALLLWFARVE-LDQQFAYYDVRFS-SVSGLSEASDVRF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++V + L + L + + TP+ + ATI +QG+ G++++ +S R +
Sbjct: 59 AGLPVGQVVDVRLSPDRDGTVLVRLEVDASTPVRSDSIATIESQGVTGVSFVGISAGRPD 118
Query: 121 KKTIFQIA------TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + Q + + + Q +ENI K
Sbjct: 119 TGLLVPTSDTPVPQITAGQSVLQALSEDAPQLINEALTVIEGVSDLFAEDNQARVENILK 178
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQ-VTPHSSDSKNTFNTITDLITSLDKMIKA 233
++ A +++ + + + + +
Sbjct: 179 NAEEASESLAATLEAFAEVPETVERFTVQVEAFNAILAGIAPEVEALLTTADTTVASLGT 238
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + ++ + ++ D+ +TT Q + + ++ S+ +
Sbjct: 239 LSSEAETMVITANDTLAVAQGTFNEAQRYINEDLTDTTYALQTTVEDLRAEIATISTDAR 298
Query: 294 SKETSAFLENIADSTSNMRSSIS-----------AIREITDQRQKIISTINTIENITSNL 342
+ + +A + + + + + +T + T L
Sbjct: 299 TMLATFNGAGVAATDRIVEAGATLVMINDTLAQISKTTLTVGDAALQFDTLLQTQATPLL 358
Query: 343 NDSSQKFAELMSKIN--NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
++ A IN +A + + D + A T DT ++ + + + +
Sbjct: 359 AETRATVAAATDAINVIGTAAQTDLPVIVADIRAATQTATDTINQVAQDLTAASGRIDGL 418
Query: 401 S---QSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
S Q+ L + T+ + +R
Sbjct: 419 SLTAQTALTQVTETFANANTTLEAVTSAMETGDR 452
Score = 40.3 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 19/205 (9%), Positives = 62/205 (30%), Gaps = 9/205 (4%)
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ + +T + + S ++ T +T+
Sbjct: 380 QTDLPVIVADIRAATQTATDTINQVAQDLTAASGRIDGLSLTAQTALTQVTETFANANTT 439
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA--LKENNS 367
+ + + I +L+ ++ +N A + +
Sbjct: 440 LEAVTSAMETGDRTLEVAERTFAGADRIINEDLDGIISGLETSLASLNGAIAQVSDDIPA 499
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
+ + + A + + +++ + + G ++ F+++GL L + + ++
Sbjct: 500 ITAELRNASQSAAEAFRSLDQVVDNAGPSVTEFTRTGLPLYTRLAVETRG-------LIS 552
Query: 428 NFERNPQDIVWGREKGSVKIYKPKH 452
N +R Q I + + P++
Sbjct: 553 NLDRLTQQIQRDPARFFLNQQSPEY 577
>gi|288962791|ref|YP_003453085.1| ABC transport system substrate-binding protein [Azospirillum sp.
B510]
gi|288915057|dbj|BAI76541.1| ABC transport system substrate-binding protein [Azospirillum sp.
B510]
Length = 319
Score = 130 bits (324), Expect = 6e-28, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 3/153 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG FV++++ W+++ Q D I GSV GL S VR+
Sbjct: 1 METRASYVLVGSFVLALVAGLLVFTAWIAKV-QLDETRETYRIYFTGSVTGLQQGSPVRY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + LD + ++ TP+ + A++ QG+ G Y+++S
Sbjct: 60 RGVPVGTVADIRLDPDNVTRVRVTIQVQNGTPIMSDSIASLELQGITGGAYVQISGGTVG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAEN 153
K + AT+ + I + PS + + +A
Sbjct: 120 GKHL--TATDADGVPTIPSRPSSLTAVVDSAPQ 150
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 76/200 (38%), Gaps = 5/200 (2%)
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + + + + ++ + +++ + + A + +A+
Sbjct: 121 KHLTATDADGVPTIPSRPSSLTAVVDSAPQLVNRSLEVVTRLGEMLNGENQKAVADILAN 180
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+ + A + + + T+N E + L + + + ++ ++
Sbjct: 181 ARTISAELAGASAGLEETMAQARRTLNGFETVGPQLARTLAQAHDTLATVDGT-----AK 235
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
L + + + + + TS+ +N +++F+ +GL ++ L+ +L++ +
Sbjct: 236 QLGGETRELLRSLKRTSDTLNALAAENREPVRDFTATGLYELTLLITQLRDLSGQLSRVV 295
Query: 427 NNFERNPQDIVWGREKGSVK 446
E +P + ++G + V+
Sbjct: 296 TRIENDPSNFLFGGTRQGVE 315
>gi|298292075|ref|YP_003694014.1| hypothetical protein Snov_2099 [Starkeya novella DSM 506]
gi|296928586|gb|ADH89395.1| Mammalian cell entry related domain protein [Starkeya novella DSM
506]
Length = 348
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/337 (18%), Positives = 121/337 (35%), Gaps = 3/337 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ YT +GLF ++++ FF ++W + N GP + G V GL T S+V F
Sbjct: 1 METRANYTIIGLFTLAVVAAGFFFVWWFTGLNN-RGPRTSYDVVFSGVVSGLQTGSAVTF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGIPVG + GL LD + P +A ++P+TP+ T A + + L G++ + L +
Sbjct: 60 NGIPVGEVTGLRLDAQDPRKVVATIAVQPNTPVKSDTRANLDSTLLTGLSSVGLVGGSTD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ R S + + +A ++ D + I ++ + + + I
Sbjct: 120 AAPLPPPPEGELPRIDANT--SAVQDLMRSAREVLGRVDDIATRIDDLLRANDSKIASVI 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N++ S L +N +ID + + +K+ ID
Sbjct: 178 DNVDKFSKALGDNAQNIDAFLRQVGGAADRISTLANNLDKVVTSFDPNKVGDTIDDVNRF 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ N + + + T + + +I L + + T+
Sbjct: 238 TQQLDGMAMKFNTILDNVNSMTTSEEGKGMFNEISSAATEIRKLAVNLDKRTAELSTNLN 297
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
+ + + + +
Sbjct: 298 QFTGPGLRQYEALAADGRKTLAEIDRVFRKFERNPRQ 334
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/205 (15%), Positives = 74/205 (36%)
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + ++ + + D +R V +D ++ +
Sbjct: 137 NTSAVQDLMRSAREVLGRVDDIATRIDDLLRANDSKIASVIDNVDKFSKALGDNAQNIDA 196
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
A + ++ + K+ TI+ + T L+ + KF ++ +N
Sbjct: 197 FLRQVGGAADRISTLANNLDKVVTSFDPNKVGDTIDDVNRFTQQLDGMAMKFNTILDNVN 256
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+++ +E +F + A R + +++ + NL F+ GL + L ++
Sbjct: 257 SMTTSEEGKGMFNEISSAATEIRKLAVNLDKRTAELSTNLNQFTGPGLRQYEALAADGRK 316
Query: 418 TVNHFDDCLNNFERNPQDIVWGREK 442
T+ D FERNP+ ++G
Sbjct: 317 TLAEIDRVFRKFERNPRQFLFGGSN 341
>gi|146280486|ref|YP_001170639.1| ABC transporter permease [Pseudomonas stutzeri A1501]
gi|145568691|gb|ABP77797.1| ABC transporter permease [Pseudomonas stutzeri A1501]
Length = 312
Score = 128 bits (320), Expect = 2e-27, Method: Composition-based stats.
Identities = 62/297 (20%), Positives = 126/297 (42%), Gaps = 7/297 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V + + WL +S+ D I +V GLS S+V +
Sbjct: 1 METRAHHVLIGLFTVLAVGGALLFALWLGKSSM-DREYNYYEISFNRAVSGLSNGSAVEY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L+L+ + P A+ I TP+ T A + + G I+L + +
Sbjct: 60 SGIKVGDVEALWLEPDDPRKVRARIRIYSGTPIKQDTRARLALANITGSMIIQLHSGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ-KIIENIEKPLTTT 179
+ +R + +I A PS ++ + N E+ I++ R + E+ + T
Sbjct: 120 SPPLEG---KRGEPPLIIADPSPLSALLENGEDLMTNINNLLRSANLMLSEDNAGRIGRT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+AN+E ++VLA + + + +++ IT L + + +I Q +
Sbjct: 177 LANLEQATSVLAEQRGDLSEALTQLSQLGQQTNTA--LAEITRLTQNANGLIDDEGRQLL 234
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ E++ + + + + + Q F E+G I+ L + + +
Sbjct: 235 SSAGESMAALERATSRLDELLSSNQGALNNGLQGFSELGPAINELRGTLGALRRVTQ 291
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 66/178 (37%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + + L+++ ++ ++S +N + + A + +QR + +
Sbjct: 139 PLSALLENGEDLMTNINNLLRSANLMLSEDNAGRIGRTLANLEQATSVLAEQRGDLSEAL 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + N + + L N + E L A +M + +++ + S
Sbjct: 199 TQLSQLGQQTNTALAEITRLTQNANGLI-DDEGRQLLSSAGESMAALERATSRLDELLSS 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
L N G +++ + +L+ T+ E NP + GREK ++ + P
Sbjct: 258 NQGALNN-GLQGFSELGPAINELRGTLGALRRVTQRLEDNPSGFLLGREK--IQEFTP 312
>gi|209964743|ref|YP_002297658.1| hypothetical protein RC1_1441 [Rhodospirillum centenum SW]
gi|209958209|gb|ACI98845.1| conserved hypothetical protein [Rhodospirillum centenum SW]
Length = 320
Score = 127 bits (318), Expect = 3e-27, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 4/174 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ YT VG FV++++ F + WL++ Q +G I G+V GL S VR+
Sbjct: 1 MENRASYTIVGAFVLALVAGLFVFVVWLAKV-QLEGATTPYRIYFTGTVTGLVEGSPVRY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + LD + + DTP+ A++ G+ G Y+E++ ++
Sbjct: 60 RGVAVGTVSDIRLDPDNVERVQVTVEVPEDTPIKTDALASLEPVGVTGGVYVEIAGGSRD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ A E +I + PS I ++ A + S + ++ + +
Sbjct: 120 APLL---AAEEGGIPVIPSRPSTIAEVLAQAPQLLGNLIAISEKVSTLLNDENQ 170
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/196 (10%), Positives = 64/196 (32%), Gaps = 2/196 (1%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + Q + +L++ A +
Sbjct: 123 LAAEEGGIPVIPSRPSTIAEVLAQAPQLLGNLIAISEKVSTLLNDENQKAFAAILGNLAA 182
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI--NNISALKENNSLFK 370
+S A + + Q + ++ ++ ++++ + + + E +
Sbjct: 183 ASDGANTTMRNADQLVGELRTEVKAVSRQATQLLGNANKVVAGVGADVQTVAAELAKTSR 242
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
D R + T+E++ + +++F+ L + L +LQ+ + E
Sbjct: 243 DLTRLTSSLATTAEEVRAMVHENREPIRDFTNETLYEFGALTIQLQDLAANLSRVTGRLE 302
Query: 431 RNPQDIVWGREKGSVK 446
R+P +++G + V+
Sbjct: 303 RDPSQLIFGTGRTGVE 318
>gi|327478708|gb|AEA82018.1| ABC transporter permease [Pseudomonas stutzeri DSM 4166]
Length = 312
Score = 127 bits (317), Expect = 4e-27, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 121/296 (40%), Gaps = 11/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V + + WL +S+ D I +V GLS SSV +
Sbjct: 1 METRAHHVLIGLFTVLAVGGALLFALWLGKSSM-DREYNYYEISFNRAVSGLSNGSSVEY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L+L+ + P A+ + TP+ T A + + G I+L + +
Sbjct: 60 SGIKVGDVEALWLEPDDPRKVRARIRVYAGTPIKQDTRARLALANITGSMIIQLHSGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ-KIIENIEKPLTTT 179
+ +R + +I A PS ++ + N E+ I++ R + E+ + T
Sbjct: 120 SPPLEG---KRGEPPLIIADPSPLSALLENGEDLMTNINNLLRSANLMLSEDNAGRIGRT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+AN+E ++VLA + + + N+ IT L + + +
Sbjct: 177 LANLEQATSVLAEQRGDLSQALTQL------GQLGQQTNSALAEITRLTQNANGLIDDEG 230
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q+L S +++ ++ + D + + + +++ + +
Sbjct: 231 RQLLSRAGDSMAALERATSRLDTLLSDNQGALNNGLQGFSDLGPAINELRGTLGAL 286
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 65/178 (36%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + + L+++ ++ ++S +N + + A + +QR + +
Sbjct: 139 PLSALLENGEDLMTNINNLLRSANLMLSEDNAGRIGRTLANLEQATSVLAEQRGDLSQAL 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + N + + L N + E L A +M + +++ +
Sbjct: 199 TQLGQLGQQTNSALAEITRLTQNANGLI-DDEGRQLLSRAGDSMAALERATSRLDTLLSD 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
L N G +D+ + +L+ T+ E NP + GREK ++ + P
Sbjct: 258 NQGALNN-GLQGFSDLGPAINELRGTLGALRRVTQRLEDNPSGFLLGREK--IQEFNP 312
>gi|319956952|ref|YP_004168215.1| mammalian cell entry related domain protein [Nitratifractor
salsuginis DSM 16511]
gi|319419356|gb|ADV46466.1| Mammalian cell entry related domain protein [Nitratifractor
salsuginis DSM 16511]
Length = 310
Score = 126 bits (316), Expect = 6e-27, Method: Composition-based stats.
Identities = 51/295 (17%), Positives = 120/295 (40%), Gaps = 5/295 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK YT VGLFV+ +F +WL++ ++ + VDGL+ DS+V+
Sbjct: 1 MYSKINYTLVGLFVLLFTILAFAFAFWLAKYG-FEEKYDYYYLYFTEPVDGLTMDSTVKL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + +D K ++ TP+ A ++ QG+ G++Y+++ +K
Sbjct: 60 KGVDVGKVSRIEIDPTNVERIRVKIRLKAGTPIVKGMYALLKLQGITGLSYVQIEGGKKG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ Q +I PS ++ +A K+ ++ + K+ + T I
Sbjct: 120 APRL---TAPEGQIPVIPTHPSLLHRLSESAPKFLDKLQHTADGLNKLFSQHNQQQLTKI 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T A + + + + + D + + ++ ++
Sbjct: 177 LNNTAEATGKAVAVENRLITLSDEFNRTLAHF-DRRSAQLVDSVDQVTDTLQKKLPPLMD 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ E + ++ ++ +D+R+ + Q +++ + + + +K+
Sbjct: 236 HVDEAGRNIADLARGIDRRLKRGEYDLRKMIRPIQIDIKELSYSYQELAEDLKNL 290
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 56/177 (31%), Gaps = 12/177 (6%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+++ + K+ H + + + ++ +++ + +
Sbjct: 141 HRLSESAPKFLDKLQHTADGLNKLFSQHNQQQLTKILNNTAEATGKAVAVENRLITLSDE 200
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
T+ + ++ L DS + + + K + L A D + I+
Sbjct: 201 FNRTLAHFDRRSAQLVDSVDQVTDTLQK--------KLPPLMDHVDEAGRNIADLARGID 252
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
R + +L+ + DI+ L QE N R+P +++G
Sbjct: 253 RRLKRGEYDLRKMIRPIQIDIKELSYSYQELAEDLK----NLSRHPSSLIFGAGSPP 305
>gi|77456267|ref|YP_345772.1| hypothetical protein Pfl01_0039 [Pseudomonas fluorescens Pf0-1]
gi|77380270|gb|ABA71783.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
Length = 312
Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 115/302 (38%), Gaps = 2/302 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S+ D + + +V GLS S V++
Sbjct: 1 METRAHHVLIGLFTVIVVAGALLFGLWLAKSS-VDTEFKDYEVVFNEAVSGLSRGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG +V L LD + P LA+ + DTP+ T A + G+ G + I+LS +
Sbjct: 60 SGIKVGDVVSLRLDPKDPRRVLARIRLAGDTPVKEDTEAKLALAGITGTSIIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + S + ++ + + ++ + +NIE+ T
Sbjct: 120 SSKLKGHDGNLPTIVASPSPISRLLSDSNDLMSGVTTLLSNANQM-FSADNIERVSKTLE 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T ++ M V + + + + L L
Sbjct: 179 HLEQTTGSINDQRGDLRQAMQQLATVGKQAGNMLEQTSALMRNANGLLNDQGKQALGSAE 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q +++++ SS + N++ + +++ L+ + + E +
Sbjct: 239 QAMKSLEQSSVTINGLLSKNQNSLDSGMQGLNGLAPAIRELRETLNSLRAISQRLEANPS 298
Query: 301 LE 302
Sbjct: 299 GY 300
Score = 73.0 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 71/178 (39%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + L+S ++ + + +NI + + I DQR + +
Sbjct: 139 PISRLLSDSNDLMSGVTTLLSNANQMFSADNIERVSKTLEHLEQTTGSINDQRGDLRQAM 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + + ++ + LM N + + +L A++AM + +S IN +
Sbjct: 199 QQLATVGKQAGNMLEQTSALMRNANGLLNDQGKQAL-GSAEQAMKSLEQSSVTINGLLSK 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
N+L + GLN + +R+L+ET+N E NP + G +K K + P
Sbjct: 258 NQNSLDS-GMQGLNGLAPAIRELRETLNSLRAISQRLEANPSGYLLGSDKN--KEFTP 312
>gi|182680565|ref|YP_001834711.1| hypothetical protein Bind_3670 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636448|gb|ACB97222.1| Mammalian cell entry related domain protein [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 353
Score = 126 bits (315), Expect = 7e-27, Method: Composition-based stats.
Identities = 75/344 (21%), Positives = 134/344 (38%), Gaps = 8/344 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ F I W S SN+ + + GS+ GLS +V F
Sbjct: 1 METRANYALIGGFTLAVIVSIFLFILWFSGSNRPAHQ-VPLRVLFNGSISGLSRGGAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + L + P+ A +I PL T A + L GI + L+ +
Sbjct: 60 NGVKVGEVTHIDLAPDDPSRVQADVVIDARVPLRSDTKARLEFTNLTGIAALALTGGSSD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A ++I A S + +A + + S+ ++++ L TI
Sbjct: 120 APPLPAAA--DGGPSVIRADRSDFQDLLESARRIATQASEFLDRANGLVDSNSASLGKTI 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N E S LA N I M + K + L T DK++K+I+ +V
Sbjct: 178 KNAEKFSDALAANSDGIKDFM--GSMADIGRTIKPLTGKLETLATDTDKVVKSIEPDRVK 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETT--QTFQEVGQKIDHLLSDFSSKMKSKETS 298
ILE+ S + +++ + + + I S+ +S K+ +
Sbjct: 236 SILEHADSFSGKLDAAGNKIEGVMASLESFLGSGESKNALNDIKGSFSEVASAAKAVRRA 295
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
A N + S +R + + I + +IEN
Sbjct: 296 ADNIN-RFAGSGLRQYEALAVDGRKTLDTISQAVRSIENNPQQF 338
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 73/197 (37%), Gaps = 5/197 (2%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+++ V + + +T + ++ + M S
Sbjct: 159 LDRANGLVDSNSASLGKTIKNAEKFSDALAANSDGIKDFMGSMADIGRTIKPLTGKLETL 218
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
++ + + + ++ S + ++ + L+ + K +M+ + + E+ + D
Sbjct: 219 ATDTDKVVKSIEPDRVKSILEHADSFSGKLDAAGNKIEGVMASLESFLGSGESKNALNDI 278
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
+ + + + + +N+ F+ SGL + L ++T++ + + E N
Sbjct: 279 KGSFSEVASAA----KAVRRAADNINRFAGSGLRQYEALAVDGRKTLDTISQAVRSIENN 334
Query: 433 PQDIVWGREKGSVKIYK 449
PQ ++G+ K S+ Y
Sbjct: 335 PQQFLFGK-KSSIPEYT 350
>gi|330806717|ref|YP_004351179.1| hypothetical protein PSEBR_a55 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327374825|gb|AEA66175.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 312
Score = 125 bits (313), Expect = 1e-26, Method: Composition-based stats.
Identities = 57/308 (18%), Positives = 125/308 (40%), Gaps = 11/308 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++ + D + +V GLS SSV +
Sbjct: 1 METRAHHVLIGLFTVIVVAGALLFGLWLAK-SNVDSEFKYYEVVFNEAVSGLSRGSSVEY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG +V L LD P LA+ + +TP+ T A + G+ G + I+LS +
Sbjct: 60 SGIKVGDVVNLRLDPNDPRRVLARVRLSGETPVKQDTQAKLALTGITGTSIIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + +I A PS I ++N+++ I+ + ++ + T
Sbjct: 120 SPVLTGH---DGEPPVIIAAPSPIARLLNNSDDLMTSINLLLHNANEVFSSDNVQSLGKT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ ++E + V+A I + M + + + T+L + + +
Sbjct: 177 LEHLEQTTGVIAEQRGDIRQAMQQL------ASIGKQASATLEQTTALMRNANGLLNDQG 230
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q N + + +S+ + ++D R++ + + + + + + +
Sbjct: 231 KQAFGNAGQAMQSLARSTATLDKLLNDNRDSLNNGMQGLNALAPAVRELRETLSALRGIS 290
Query: 300 FLENIADS 307
+ S
Sbjct: 291 RRLDANPS 298
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 70/178 (39%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ D L++ + + + +N+ + I +QR I +
Sbjct: 139 PIARLLNNSDDLMTSINLLLHNANEVFSSDNVQSLGKTLEHLEQTTGVIAEQRGDIRQAM 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ +I + + ++ LM N + + F +A +AM + ++ +++ +
Sbjct: 199 QQLASIGKQASATLEQTTALMRNANGLLN-DQGKQAFGNAGQAMQSLARSTATLDKLLND 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
++L N GLN + VR+L+ET++ + NP + G +K K + P
Sbjct: 258 NRDSLNN-GMQGLNALAPAVRELRETLSALRGISRRLDANPSGYLLGNDKD--KEFTP 312
>gi|237808111|ref|YP_002892551.1| Mammalian cell entry related domain-containing protein [Tolumonas
auensis DSM 9187]
gi|237500372|gb|ACQ92965.1| Mammalian cell entry related domain protein [Tolumonas auensis DSM
9187]
Length = 312
Score = 125 bits (311), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/296 (17%), Positives = 113/296 (38%), Gaps = 9/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF+V WL +S+ G + V GL+ S+V +
Sbjct: 1 METRAHHVLIGLFIVIAFGGILLFTLWLGKSSSERG-FVYYDVLFNEEVSGLTAGSAVEY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD + P A + DTP+ +T A + + G I L
Sbjct: 60 SGIKVGEVESLQLDPQDPRKVWAHTRLSADTPVKKNTRARLALANITGSALIRLFDGSPT 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +I A PS I+ F++N EN I++ + ++ ++ +
Sbjct: 120 SPLLQG---IDGRVPVIIADPSPISRFLANGENLMGNINNLAGNLNQLFSK-----ENIL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T++ V + + + N I+ L + + +
Sbjct: 172 SLSKTLNHVEQVTEVLATQRSDLAETIRQINTLSKEANIAMHDISRLARNTDKLIGDQGQ 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
++L N S +++ ++ + + + Q + + + + + + S
Sbjct: 232 RVLNNAAQSMATLEQATRRIDQLISNNQAPLQNGLQSLNDLGPAMQELRAALASLN 287
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 68/178 (38%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
++L+ + ++ + ENI + + + QR + TI
Sbjct: 139 PISRFLANGENLMGNINNLAGNLNQLFSKENILSLSKTLNHVEQVTEVLATQRSDLAETI 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
I ++ N + + L + + + + +A ++M T + +I++ I +
Sbjct: 199 RQINTLSKEANIAMHDISRLARNTDKLIG-DQGQRVLNNAAQSMATLEQATRRIDQLISN 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
LQN LND+ +++L+ + + E +P + REK + ++P
Sbjct: 258 NQAPLQN-GLQSLNDLGPAMQELRAALASLNRLSRRLEEDPSGFLLDREKN--EEFQP 312
>gi|225627499|ref|ZP_03785536.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|260168731|ref|ZP_05755542.1| ABC transporter, periplasmic substrate-binding protein, putative
[Brucella sp. F5/99]
gi|261758209|ref|ZP_06001918.1| ABC transporter [Brucella sp. F5/99]
gi|225617504|gb|EEH14549.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|261738193|gb|EEY26189.1| ABC transporter [Brucella sp. F5/99]
Length = 331
Score = 123 bits (308), Expect = 5e-26, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F +YW++R + + +RI GSV GL S V F
Sbjct: 1 METKANYVLVGVFTLLVSLLAFGFVYWIARYGE-ARDSLPLDVRIQGSVTGLGIGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD P + + + TP+ STTAT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRRLHLDDSNPGMVIVQTRVNATTPITRSTTATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS +N ++ A++ + + ++ ++ +++ PLT TI
Sbjct: 120 EPNLLTEAAKEDTVARINADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA+N I ++ + + + L + K+ ++
Sbjct: 180 NNTKTFTQALADNADIIQELGQNAGNIRQI--VVDAKDMMARLNAASVKVESILNKTDKM 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T +++ +
Sbjct: 238 LSADDKNGLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSG 280
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 6/202 (2%)
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + V N + ++ V +++ + D + + N
Sbjct: 130 EDTVARINADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARG-----PLTDTINNTKT 184
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
T + + I+E+ I + +++ + LN +S K +++K + + + + N
Sbjct: 185 FTQALADNADIIQELGQNAGNIRQIVVDAKDMMARLNAASVKVESILNKTDKMLSADDKN 244
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
L A + + R+TS ++ + I NNL FS GL ++Q +V + + + +
Sbjct: 245 GLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSGQGLREMQGVVIDSRRAIQRIEQVI 304
Query: 427 NNFERNPQDIVWGREKGSVKIY 448
ERNPQ +++G GSV Y
Sbjct: 305 TELERNPQRLIFGG-PGSVPQY 325
>gi|23501901|ref|NP_698028.1| ABC transporter periplasmic substrate-binding protein [Brucella
suis 1330]
gi|23347842|gb|AAN29943.1| ABC transporter, periplasmic substrate-binding protein, putative
[Brucella suis 1330]
Length = 331
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 124/283 (43%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F +YW++R + + +RI GSV GL S V F
Sbjct: 1 METKANYVLVGVFTLLVSLLAFGFVYWIARYGE-ARDSLPLDVRIQGSVTGLGIGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD P + + + TP+ STTAT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRRLHLDDSNPGMVIVQTRVNATTPITRSTTATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS +N ++ A++ + + ++ ++ ++ PLT TI
Sbjct: 120 EPNLLTEAAKEDTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKGARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA+N I ++ + + + L + K+ ++
Sbjct: 180 NNTKTFTQALADNADIIQELGQNAGNIRQI--VVDAKDMMARLNAASVKVESILNKTDKM 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T +++ +
Sbjct: 238 LSADDKNGLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSG 280
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 87/196 (44%), Gaps = 3/196 (1%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK--ETSAFLENIADSTSNMR 312
+ ++ V T Q++ + +++LS +K + + N T +
Sbjct: 131 DTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKGARGPLTDTINNTKTFTQALA 190
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ I+E+ I + +++ + LN +S K +++K + + + + N L A
Sbjct: 191 DNADIIQELGQNAGNIRQIVVDAKDMMARLNAASVKVESILNKTDKMLSADDKNGLVAQA 250
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
+ + R+TS ++ + I NNL FS GL ++Q +V + + + + ERN
Sbjct: 251 ITTLQSIRETSNNLDARLAPIANNLDRFSGQGLREMQGVVIDSRRAIQRIEQVITELERN 310
Query: 433 PQDIVWGREKGSVKIY 448
PQ +++G GSV Y
Sbjct: 311 PQRLIFGG-PGSVPQY 325
>gi|161618973|ref|YP_001592860.1| hypothetical protein BCAN_A1036 [Brucella canis ATCC 23365]
gi|254701772|ref|ZP_05163600.1| hypothetical protein Bsuib55_13071 [Brucella suis bv. 5 str. 513]
gi|254704314|ref|ZP_05166142.1| hypothetical protein Bsuib36_10364 [Brucella suis bv. 3 str. 686]
gi|254706784|ref|ZP_05168612.1| hypothetical protein BpinM_07300 [Brucella pinnipedialis
M163/99/10]
gi|254710106|ref|ZP_05171917.1| hypothetical protein BpinB_07491 [Brucella pinnipedialis B2/94]
gi|254714107|ref|ZP_05175918.1| hypothetical protein BcetM6_12270 [Brucella ceti M644/93/1]
gi|254716836|ref|ZP_05178647.1| hypothetical protein BcetM_10524 [Brucella ceti M13/05/1]
gi|254719097|ref|ZP_05180908.1| hypothetical protein Bru83_06090 [Brucella sp. 83/13]
gi|256031602|ref|ZP_05445216.1| hypothetical protein BpinM2_13273 [Brucella pinnipedialis
M292/94/1]
gi|256061113|ref|ZP_05451267.1| hypothetical protein Bneo5_12207 [Brucella neotomae 5K33]
gi|256159740|ref|ZP_05457487.1| hypothetical protein BcetM4_12243 [Brucella ceti M490/95/1]
gi|256255002|ref|ZP_05460538.1| hypothetical protein BcetB_12045 [Brucella ceti B1/94]
gi|256369445|ref|YP_003106953.1| ABC transporter, periplasmic substrate-binding protein, putative
[Brucella microti CCM 4915]
gi|260566439|ref|ZP_05836909.1| ABC transporter [Brucella suis bv. 4 str. 40]
gi|261218638|ref|ZP_05932919.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261222190|ref|ZP_05936471.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261314252|ref|ZP_05953449.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317655|ref|ZP_05956852.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321864|ref|ZP_05961061.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261325114|ref|ZP_05964311.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261752325|ref|ZP_05996034.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261754983|ref|ZP_05998692.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265984088|ref|ZP_06096823.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265988690|ref|ZP_06101247.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265998154|ref|ZP_06110711.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294852388|ref|ZP_06793061.1| ABC transport system substrate-binding protein [Brucella sp. NVSL
07-0026]
gi|306838381|ref|ZP_07471226.1| ABC transporter, periplasmic substrate-binding protein [Brucella
sp. NF 2653]
gi|161335784|gb|ABX62089.1| Mammalian cell entry related domain protein [Brucella canis ATCC
23365]
gi|255999605|gb|ACU48004.1| ABC transporter, periplasmic substrate-binding protein, putative
[Brucella microti CCM 4915]
gi|260155957|gb|EEW91037.1| ABC transporter [Brucella suis bv. 4 str. 40]
gi|260920774|gb|EEX87427.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260923727|gb|EEX90295.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261294554|gb|EEX98050.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296878|gb|EEY00375.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301094|gb|EEY04591.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261303278|gb|EEY06775.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261742078|gb|EEY30004.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261744736|gb|EEY32662.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262552622|gb|EEZ08612.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264660887|gb|EEZ31148.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|264662680|gb|EEZ32941.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294820977|gb|EFG37976.1| ABC transport system substrate-binding protein [Brucella sp. NVSL
07-0026]
gi|306406521|gb|EFM62755.1| ABC transporter, periplasmic substrate-binding protein [Brucella
sp. NF 2653]
Length = 331
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F +YW++R + + +RI GSV GL S V F
Sbjct: 1 METKANYVLVGVFTLLVSLLAFGFVYWIARYGE-ARDSLPLDVRIQGSVTGLGIGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD P + + + TP+ STTAT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRRLHLDDSNPGMVIVQTRVNATTPITRSTTATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS +N ++ A++ + + ++ ++ +++ PLT TI
Sbjct: 120 EPNLLTEAAKEDTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA+N I ++ + + + L + K+ ++
Sbjct: 180 NNTKTFTQALADNADIIQELGQNAGNIRQI--VVDAKDMMARLNAASVKVESILNKTDKM 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T +++ +
Sbjct: 238 LSADDKNGLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSG 280
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 6/202 (2%)
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + V N + ++ V +++ + D + + N
Sbjct: 130 EDTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARG-----PLTDTINNTKT 184
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
T + + I+E+ I + +++ + LN +S K +++K + + + + N
Sbjct: 185 FTQALADNADIIQELGQNAGNIRQIVVDAKDMMARLNAASVKVESILNKTDKMLSADDKN 244
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
L A + + R+TS ++ + I NNL FS GL ++Q +V + + + +
Sbjct: 245 GLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSGQGLREMQGVVIDSRRAIQRIEQVI 304
Query: 427 NNFERNPQDIVWGREKGSVKIY 448
ERNPQ +++G GSV Y
Sbjct: 305 TELERNPQRLIFGG-PGSVPQY 325
>gi|90425516|ref|YP_533886.1| hypothetical protein RPC_4041 [Rhodopseudomonas palustris BisB18]
gi|90107530|gb|ABD89567.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB18]
Length = 367
Score = 123 bits (307), Expect = 5e-26, Method: Composition-based stats.
Identities = 59/390 (15%), Positives = 130/390 (33%), Gaps = 31/390 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG FV++ + F + WL ++ ++ GSV GL ++V F
Sbjct: 1 METRAPFIIVGAFVLAAIAAVFGFVLWLHNTSGLGARTT-YHVQFNGSVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L + P A + TP+ T + QGL G
Sbjct: 60 NGIRVGEVTELGLAPDNPRQVNATIGVDATTPVRADTKVGLDFQGLTG------------ 107
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ IA E + + T + ++ ++ ++ R + ++ +PL TI
Sbjct: 108 ---VPVIALEGGTQLAPSGTVPTLVADPGAGQSMTQAAREALRKVDAVLTENAEPLKATI 164
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+++ + LA N +D +M + + K + +
Sbjct: 165 GDLKIFAEGLARNTGKLDGIMAGVERM---------------TGADKPVVTKVVYDLRAA 209
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
L + + + R + SD K+ +
Sbjct: 210 TDLPPGKPIKGQLAIAEPTYVVMFDTQRLLLAPGLDYPAFAGFQWSDSIPKLVQAKLIQS 269
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
EN + + +R+S + + + ++ + + S++ ++ ++
Sbjct: 270 FENYDIAHAPLRASDALQADHQLLIDIRSFQVGGSPDLAAEVAFSAKIVSKDGKQVAAKL 329
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ A+ F + + + +
Sbjct: 330 FRASAPLDKPEPLAALAAFNEAFGSVAKEL 359
>gi|163843289|ref|YP_001627693.1| hypothetical protein BSUIS_A1064 [Brucella suis ATCC 23445]
gi|163674012|gb|ABY38123.1| Mammalian cell entry related domain protein [Brucella suis ATCC
23445]
Length = 331
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F +YW++R + + +RI GSV GL S V F
Sbjct: 1 METKANYVLVGVFTLLVSLLAFGFVYWIARYGE-ARDSLPLDVRIQGSVTGLGIGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD P + + + TP+ STTAT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRRLHLDDSNPGMVIVQTRVNATTPITRSTTATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS +N ++ A++ + + ++ ++ +++ PLT TI
Sbjct: 120 EPNLLTEAAKEDTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA+N I ++ + + + L + K+ ++
Sbjct: 180 NNTKTFTQALADNADIIQELGQNAG--SIRQIVVDAKDMMARLNAASVKVESILNKTDKM 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T +++ +
Sbjct: 238 LSADDKNGLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSG 280
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 6/202 (2%)
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + V N + ++ V +++ + D + + N
Sbjct: 130 EDTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARG-----PLTDTINNTKT 184
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
T + + I+E+ I + +++ + LN +S K +++K + + + + N
Sbjct: 185 FTQALADNADIIQELGQNAGSIRQIVVDAKDMMARLNAASVKVESILNKTDKMLSADDKN 244
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
L A + + R+TS ++ + I NNL FS GL ++Q +V + + + +
Sbjct: 245 GLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSGQGLREMQGVVIDSRRAIQRIEQVI 304
Query: 427 NNFERNPQDIVWGREKGSVKIY 448
ERNPQ +++G GSV Y
Sbjct: 305 TELERNPQRLIFGG-PGSVPQY 325
>gi|306840508|ref|ZP_07473267.1| ABC transporter, periplasmic substrate-binding protein [Brucella
sp. BO2]
gi|306843895|ref|ZP_07476490.1| ABC transporter, periplasmic substrate-binding protein [Brucella
sp. BO1]
gi|306275650|gb|EFM57374.1| ABC transporter, periplasmic substrate-binding protein [Brucella
sp. BO1]
gi|306289523|gb|EFM60741.1| ABC transporter, periplasmic substrate-binding protein [Brucella
sp. BO2]
Length = 331
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F +YW++R + + +RI GSV GL S V F
Sbjct: 1 METKANYVLVGVFTLLVSLLAFGFVYWIARYGE-ARDSLPLDVRIQGSVTGLGIGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD P + + + TP+ STTAT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRRLHLDDSNPGMVIVQTRVNATTPITRSTTATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS +N ++ A++ + + ++ ++ +++ PLT TI
Sbjct: 120 EPNLLTEAAKEDTVARIDADPSAVNNLLATAQDIAARANNVLSELEGFVKDARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA+N I ++ + + + L + K+ ++
Sbjct: 180 NNTKTFTQALADNADIIQELGQNAGNIRQI--VVDAKDMMARLNAASVKVESILNKTDKM 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T +++ +
Sbjct: 238 LSADDKNGLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSG 280
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 84/202 (41%), Gaps = 6/202 (2%)
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + V N + ++ V +++ + D + + N
Sbjct: 130 EDTVARIDADPSAVNNLLATAQDIAARANNVLSELEGFVKDARG-----PLTDTINNTKT 184
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
T + + I+E+ I + +++ + LN +S K +++K + + + + N
Sbjct: 185 FTQALADNADIIQELGQNAGNIRQIVVDAKDMMARLNAASVKVESILNKTDKMLSADDKN 244
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
L A + + R+TS ++ + I NNL FS GL ++Q +V + + + +
Sbjct: 245 GLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSGQGLREMQGVVIDSRRAIQRIEQVI 304
Query: 427 NNFERNPQDIVWGREKGSVKIY 448
ERNPQ +++G GSV Y
Sbjct: 305 TELERNPQRLIFGG-PGSVPQY 325
>gi|119897563|ref|YP_932776.1| hypothetical protein azo1272 [Azoarcus sp. BH72]
gi|119669976|emb|CAL93889.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 313
Score = 123 bits (307), Expect = 6e-26, Method: Composition-based stats.
Identities = 51/304 (16%), Positives = 107/304 (35%), Gaps = 5/304 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL + + D + +V+GLS S+V F
Sbjct: 1 METRAHHVLIGLFTVLVVGAALSFALWLGKVDS-DTQFNLYDVVFEEAVNGLSKGSTVEF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + L LD + P LA+ + P+ T A + QG+ GI I LS+
Sbjct: 60 NGIKIGEVSNLRLDPKDPRRVLARIRVDSAAPIRSDTRARLAPQGITGIYTIRLSSGNDP 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL--TT 178
+ + + +I A PS ++ ++N E+ +++ + + T
Sbjct: 120 GSVALEP--RQGEVPVIIADPSPLSRLLANGEDVMVNVNELLMQARVLFSAENAASLGRT 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+T + A + + + ++ + + L LQ
Sbjct: 178 LGHLEQTTGALAAQREDMGRALRELARASEQANAALAEATKMMSATNRLIDTQGKETLQS 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + + + K + ++ L+ + + E
Sbjct: 238 AQRSMAAFEQAMQTVDKLVADNRGQLDSGMRGIADLGPALSELRRTLASLRTITRQLEDR 297
Query: 299 AFLE 302
Sbjct: 298 PADY 301
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 63/178 (35%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + ++ + + + EN A + + QR+ + +
Sbjct: 140 PLSRLLANGEDVMVNVNELLMQARVLFSAENAASLGRTLGHLEQTTGALAAQREDMGRAL 199
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + N + + ++MS N + + + AQR+M F + +++ +
Sbjct: 200 RELARASEQANAALAEATKMMSATNRLI-DTQGKETLQSAQRSMAAFEQAMQTVDKLVAD 258
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
L + G+ D+ + +L+ T+ E P D + G E + ++P
Sbjct: 259 NRGQLDS-GMRGIADLGPALSELRRTLASLRTITRQLEDRPADYLLGLEPT--REFQP 313
>gi|17987246|ref|NP_539880.1| toluene tolerance protein TTG2C [Brucella melitensis bv. 1 str.
16M]
gi|62289944|ref|YP_221737.1| ABC transporter periplasmic substrate-binding protein [Brucella
abortus bv. 1 str. 9-941]
gi|82699872|ref|YP_414446.1| hypothetical protein BAB1_1040 [Brucella melitensis biovar Abortus
2308]
gi|189024187|ref|YP_001934955.1| ABC transporter, periplasmic substrate-binding protein [Brucella
abortus S19]
gi|225852526|ref|YP_002732759.1| mammalian cell entry related domain-containing protein [Brucella
melitensis ATCC 23457]
gi|237815445|ref|ZP_04594443.1| toluene tolerance protein TTG2C [Brucella abortus str. 2308 A]
gi|254689251|ref|ZP_05152505.1| Mammalian cell entry related domain protein [Brucella abortus bv. 6
str. 870]
gi|254693735|ref|ZP_05155563.1| Mammalian cell entry related domain protein [Brucella abortus bv. 3
str. Tulya]
gi|254697386|ref|ZP_05159214.1| Mammalian cell entry related domain protein [Brucella abortus bv. 2
str. 86/8/59]
gi|254730284|ref|ZP_05188862.1| Mammalian cell entry related domain protein [Brucella abortus bv. 4
str. 292]
gi|256044680|ref|ZP_05447584.1| Mammalian cell entry related domain protein [Brucella melitensis
bv. 1 str. Rev.1]
gi|256113574|ref|ZP_05454394.1| Mammalian cell entry related domain protein [Brucella melitensis
bv. 3 str. Ether]
gi|256257501|ref|ZP_05463037.1| Mammalian cell entry related domain protein [Brucella abortus bv. 9
str. C68]
gi|256263984|ref|ZP_05466516.1| ABC transporter [Brucella melitensis bv. 2 str. 63/9]
gi|260545307|ref|ZP_05821048.1| ABC transporter [Brucella abortus NCTC 8038]
gi|260564026|ref|ZP_05834512.1| ABC transporter [Brucella melitensis bv. 1 str. 16M]
gi|260754757|ref|ZP_05867105.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260757980|ref|ZP_05870328.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260761803|ref|ZP_05874146.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883777|ref|ZP_05895391.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261214009|ref|ZP_05928290.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|265991104|ref|ZP_06103661.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994941|ref|ZP_06107498.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|297248345|ref|ZP_06932063.1| ABC transport system substrate-binding protein [Brucella abortus
bv. 5 str. B3196]
gi|17982920|gb|AAL52144.1| toluene tolerance protein ttg2c [Brucella melitensis bv. 1 str.
16M]
gi|62196076|gb|AAX74376.1| ABC transporter, periplasmic substrate-binding protein [Brucella
abortus bv. 1 str. 9-941]
gi|82615973|emb|CAJ10996.1| Mce4/Rv3499c/MTV023.06c protein [Brucella melitensis biovar Abortus
2308]
gi|189019759|gb|ACD72481.1| ABC transporter, periplasmic substrate-binding protein [Brucella
abortus S19]
gi|225640891|gb|ACO00805.1| Mammalian cell entry related domain protein [Brucella melitensis
ATCC 23457]
gi|237790282|gb|EEP64492.1| toluene tolerance protein TTG2C [Brucella abortus str. 2308 A]
gi|260096714|gb|EEW80589.1| ABC transporter [Brucella abortus NCTC 8038]
gi|260154042|gb|EEW89134.1| ABC transporter [Brucella melitensis bv. 1 str. 16M]
gi|260668298|gb|EEX55238.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260672235|gb|EEX59056.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260674865|gb|EEX61686.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260873305|gb|EEX80374.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260915616|gb|EEX82477.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|262766054|gb|EEZ11843.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263001888|gb|EEZ14463.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|263094128|gb|EEZ18050.1| ABC transporter [Brucella melitensis bv. 2 str. 63/9]
gi|297175514|gb|EFH34861.1| ABC transport system substrate-binding protein [Brucella abortus
bv. 5 str. B3196]
gi|326409042|gb|ADZ66107.1| ABC transporter, periplasmic substrate-binding protein [Brucella
melitensis M28]
gi|326538751|gb|ADZ86966.1| mammalian cell entry related domain protein [Brucella melitensis
M5-90]
Length = 331
Score = 123 bits (306), Expect = 7e-26, Method: Composition-based stats.
Identities = 68/283 (24%), Positives = 125/283 (44%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F +YW++R + + +RI GSV GL S V F
Sbjct: 1 METKANYVLVGVFTLLVSLLAFGFVYWIARYGE-ARDSLPLDVRIQGSVTGLGIGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD P + + + TP+ STTAT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRRLHLDDSNPGMVIVQTRVNATTPITRSTTATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS +N ++ A++ + + ++ ++ +++ PLT TI
Sbjct: 120 EPNLLTEAAKEDTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA+N I ++ + + + L + K+ ++
Sbjct: 180 NNTKTFTQALADNADIIQELGQNAGNIRQI--VVDAKDMMARLNAASVKVESILNKTDKM 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T +++ +
Sbjct: 238 LSADDKNGLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSG 280
Score = 93.8 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 83/202 (41%), Gaps = 6/202 (2%)
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + V N + ++ V +++ + D + + N
Sbjct: 130 EDTVARIDADPSAVNNLLATAQDIAARANNVLSQLEGFVKDARG-----PLTDTINNTKT 184
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
T + + I+E+ I + +++ + LN +S K +++K + + + + N
Sbjct: 185 FTQALADNADIIQELGQNAGNIRQIVVDAKDMMARLNAASVKVESILNKTDKMLSADDKN 244
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
L A + + R+TS ++ + I NNL FS GL ++Q +V + + + +
Sbjct: 245 GLVAQAITTLQSIRETSNNLDARLAPIANNLDRFSGQGLREMQGVVIDSRRAIQRIEQVI 304
Query: 427 NNFERNPQDIVWGREKGSVKIY 448
ERNPQ +++G SV Y
Sbjct: 305 TELERNPQRLIFGG-PVSVPQY 325
>gi|323136830|ref|ZP_08071911.1| Mammalian cell entry related domain protein [Methylocystis sp. ATCC
49242]
gi|322398147|gb|EFY00668.1| Mammalian cell entry related domain protein [Methylocystis sp. ATCC
49242]
Length = 301
Score = 123 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 63/285 (22%), Positives = 108/285 (37%), Gaps = 5/285 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++I F +F +YW S +Q I G+V GL+ S V F
Sbjct: 1 METRANYALIGAFTLAIAFAAFGFVYWFSGPSQIGRQET-YQIVFSGAVSGLTRGSGVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + L + + P+ + I TP+ T A + T+G G+ + L
Sbjct: 60 NGVKVGEVTHLAISESDPSKVDVEVKIDNRTPVKTDTRARLETRGFTGVADVLLVGGTPR 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A + I A S I + N ++ S K ++ + K+++ +T T+
Sbjct: 120 APKLV--AQPGQRYPQIQAERSEIQNLLGNVQHLSTKAAEVLVKLDKLLDQNSDSITATL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHS--SDSKNTFNTITDLITSLDKMIKAIDLQK 238
N ET + LA+N S + M HS + + L + +
Sbjct: 178 KNAETFTKTLADNSSAVTAFMRDAADVAHSLKPVAARLDKVLAAGEARLKAIDPRKIKEI 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
I + Q D R+ T + I+
Sbjct: 238 TGNIAGASANINKFSATGLRQYEALAVDGRKAVDTLDRTLRSIEK 282
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 68/197 (34%), Gaps = 10/197 (5%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
V + + V + Q +I +LL + + N
Sbjct: 113 LVGGTPRAPKLVAQPGQRYPQIQAERSEIQNLLGNVQHLSTKAAEVLVKLD-KLLDQNSD 171
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
S + ++ + + + + + D + + ++++ + A E D
Sbjct: 172 SITATLKNAETFTKTLADNSSAVTAFMRDAADVAHSLKPVAARLDKVLAAGEARLKAIDP 231
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
++ ++I I N+ FS +GL + L ++ V+ D L + E++
Sbjct: 232 RKI--------KEITGNIAGASANINKFSATGLRQYEALAVDGRKAVDTLDRTLRSIEKD 283
Query: 433 PQDIVWGREKGSVKIYK 449
P ++G + +V Y+
Sbjct: 284 PSQFIFGPSQ-TVPEYQ 299
>gi|104779406|ref|YP_605904.1| hypothetical protein PSEEN0096 [Pseudomonas entomophila L48]
gi|95108393|emb|CAK13087.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 312
Score = 123 bits (306), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/295 (17%), Positives = 114/295 (38%), Gaps = 9/295 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GL V ++ + WL++S+ D + + +V GLS S V++
Sbjct: 1 METRAHHVLIGLVTVLVVAGAMLFGLWLTKSS-VDTAFKDYEVVFNEAVSGLSRGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + P LA+ + DTP+ T A + G+ G +I+LS
Sbjct: 60 NGIKVGDVSSLRLDPKDPRRVLARVRLSGDTPVKEDTQAKLTLAGVTGNAFIQLSGGTPH 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + S +++ + Q E + L+ T+
Sbjct: 120 SPELKGKDGKLPVIVASPSPIS--RLLNDSSDLVTNINLLLHNANQMFSEGNIERLSNTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+E + AN I + + N +L + + +
Sbjct: 178 ANLEQTTGAFANQKGGISAAIEQL------AQVGKQANATLAETQALMRNANGLLGNQGK 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q + + + + +S+ + + + D R++ + ++ + + + +
Sbjct: 232 QAIGSAEQAMQALAESAATLNSLLQDNRQSIDDGAQGLNQLSPAIRELRETLNAL 286
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 68/178 (38%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ L+++ + + + NI ++ + + +Q+ I + I
Sbjct: 139 PISRLLNDSSDLVTNINLLLHNANQMFSEGNIERLSNTLANLEQTTGAFANQKGGISAAI 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + N + + LM N + + A++AM +++ +N +
Sbjct: 199 EQLAQVGKQANATLAETQALMRNANGLLGN-QGKQAIGSAEQAMQALAESAATLNSLLQD 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
++ + GLN + +R+L+ET+N E +P + GR+ K ++P
Sbjct: 258 NRQSIDD-GAQGLNQLSPAIRELRETLNALKGISRRLEADPSGYLLGRDNN--KEFQP 312
>gi|70733610|ref|YP_257250.1| MCE-like family protein [Pseudomonas fluorescens Pf-5]
gi|68347909|gb|AAY95515.1| mce related protein family [Pseudomonas fluorescens Pf-5]
Length = 312
Score = 122 bits (305), Expect = 9e-26, Method: Composition-based stats.
Identities = 52/306 (16%), Positives = 121/306 (39%), Gaps = 9/306 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S+ D + I +V GLS SSV++
Sbjct: 1 METRAHHVLIGLFTVIVVAGALLFGLWLAKSS-VDSAFQDYQIVFNEAVSGLSKGSSVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG +V L LD + P LA+ + +TP+ T A + G+ G + I+LS +
Sbjct: 60 SGIKVGDVVNLRLDPKDPRRVLAQIRLGSETPIKEDTQAKLALTGITGTSIIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
T+ + + I A+PS I ++N+ + ++ + ++ ++
Sbjct: 120 SPTLKG---KDGELPTIIASPSPIARLLNNSNDLMTGVNLLLHNANRMFSPDNVARVSST 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + + + + T+L + + +
Sbjct: 177 LDNLQKTSASIAEQRDDLRQL-----MQQLGSISKQTGAMLEQTTALMRNANGLLNDQGK 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q+ + + + + +SS + + D +++ + + + + + S
Sbjct: 232 QMFGSAEHAMRSLEQSSATLNKLLSDNQDSLNNGMQGLNGLAPAVRELRETLSSLRAITR 291
Query: 301 LENIAD 306
Sbjct: 292 RLEANP 297
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/178 (19%), Positives = 73/178 (41%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + L++ + + + +N+A +S + + I +QR + +
Sbjct: 139 PIARLLNNSNDLMTGVNLLLHNANRMFSPDNVARVSSTLDNLQKTSASIAEQRDDLRQLM 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ +I+ ++ LM N + + +F A+ AM + +S +N+ +
Sbjct: 199 QQLGSISKQTGAMLEQTTALMRNANGLLN-DQGKQMFGSAEHAMRSLEQSSATLNKLLSD 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
++L N GLN + VR+L+ET++ E NP + G EK K + P
Sbjct: 258 NQDSLNN-GMQGLNGLAPAVRELRETLSSLRAITRRLEANPGGYLLGNEKN--KEFTP 312
>gi|296445996|ref|ZP_06887946.1| Mammalian cell entry related domain protein [Methylosinus
trichosporium OB3b]
gi|296256514|gb|EFH03591.1| Mammalian cell entry related domain protein [Methylosinus
trichosporium OB3b]
Length = 294
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 3/204 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++F +F ++W S + I GSV GL+ +V F
Sbjct: 1 METRANYALIGAFTIAVVFAAFGFVFWFSGPSTT-AQYKTYQIVFSGSVSGLTRGGAVEF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + L + +E P+ I TP+ T A + + G G+ + L
Sbjct: 60 DGLKVGEVTQLAISEEDPSRVDVLVNIDKKTPIKIDTKARLESAGFTGVKTVALVGGTPR 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A I A S + I + + SKK +D+ I K+++ ++ T+
Sbjct: 120 APVL--AAAPGQAYPRIEAEGSDLQNIIDSVQRLSKKATDALDKIDKLLDANSATISQTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTT 204
N ET + LA+N +I +M
Sbjct: 178 QNAETFTKALADNSENIGSVMKDM 201
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/201 (16%), Positives = 75/201 (37%), Gaps = 32/201 (15%)
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
KID S+ +T A + + + A I + + + I++++ ++
Sbjct: 93 KIDTKARLESAGFTGVKTVALVGGTPRAPVLAAAPGQAYPRIEAEGSDLQNIIDSVQRLS 152
Query: 340 SNLNDSSQKFAELMSKINNIS----------------ALKENNSLFKDAQRAMHTFRDTS 383
D+ K +L+ + + S+ KD + +
Sbjct: 153 KKATDALDKIDKLLDANSATISQTLQNAETFTKALADNSENIGSVMKDMAALGRSLKPIP 212
Query: 384 EKINRYIPSI---------------GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
E++++ + +I NNL+ FS GL + L ++T+ + + +
Sbjct: 213 ERLDKLLAAIDPKKLSSISTDIAAASNNLKTFSGGGLKQYELLAVDARKTLETVERAVRS 272
Query: 429 FERNPQDIVWGREKGSVKIYK 449
E+NPQ +++G ++ YK
Sbjct: 273 LEKNPQQVLFGAT-PALPEYK 292
>gi|170724244|ref|YP_001751932.1| hypothetical protein PputW619_5087 [Pseudomonas putida W619]
gi|169762247|gb|ACA75563.1| Mammalian cell entry related domain protein [Pseudomonas putida
W619]
Length = 312
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 55/295 (18%), Positives = 121/295 (41%), Gaps = 9/295 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GL V ++ + WL++S+ D + + +V GLS S V++
Sbjct: 1 METRAHHVLIGLVTVLVVAGAMLFGLWLTKSS-VDDAFKDYEVIFNEAVSGLSRGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + P LA+ + DTP+ T A + G+ G ++I+LS +
Sbjct: 60 NGIKVGDVTSLRLDPKDPRRVLARVRLSGDTPVKEDTQAKLTLAGVTGNSFIQLSGGTPK 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + S +++ + Q EN L+ T+
Sbjct: 120 SPELKGKDGKLPVIIASPSPIS--QLLNDSSDLVTNINLLLHNANQMFSENNIDRLSNTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+E ++ AN+ I + + + N +L + ++ +
Sbjct: 178 ANLEQTTSAFANHKGGISQAI------EQLAQVGKQANATLAETQALMRNANSLLGTQGK 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q + + + + + S+ + + ++D R++ + ++ + + + S
Sbjct: 232 QAIGSAEQAMQSLAASTATINSLLNDNRQSIDDGAQGLNQLTPAIRELRETLNSL 286
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 70/178 (39%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
++ L+++ + + + NI ++ + + + + I I
Sbjct: 139 PISQLLNDSSDLVTNINLLLHNANQMFSENNIDRLSNTLANLEQTTSAFANHKGGISQAI 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + N + + LM N++ + A++AM + ++ IN +
Sbjct: 199 EQLAQVGKQANATLAETQALMRNANSLLGT-QGKQAIGSAEQAMQSLAASTATINSLLND 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
++ + GLN + +R+L+ET+N E +P + GR+ ++K ++P
Sbjct: 258 NRQSIDD-GAQGLNQLTPAIRELRETLNSLKGISRRLEADPSGYLLGRD--NIKEFQP 312
>gi|239831969|ref|ZP_04680298.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239824236|gb|EEQ95804.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 331
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F ++W++R + E+ +RIPGSV GLS S V F
Sbjct: 1 METKANYVLVGVFTLIVSLLAFAFVFWIARFGE-ARDSLELDVRIPGSVTGLSIGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD+ P + K + TP+ ST AT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRALHLDETNPEMVIVKTRVNATTPITRSTAATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A PS IN ++ A++ + + + ++ +++ PLT TI
Sbjct: 120 EPNLLTEAAKVDSVARIDADPSSINNLLATAQDIAARANSVLGQLEGFVKDARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA N + I+++ + + + + L + ++ +
Sbjct: 180 NNTKTFTDALAKNANIIEEL--GQNTGNINQIVTDAKDMMARLNAASVRVDAILAKTDKL 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T ++ + + Q+
Sbjct: 238 LSSDDKDGVVAQAKATLESIRQTSDNLDKRLGPIADNLQRFSG 280
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK--ETSAFLENIADSTSNMR 312
S ++ + T Q++ + + +L +K + + N T +
Sbjct: 131 DSVARIDADPSSINNLLATAQDIAARANSVLGQLEGFVKDARGPLTDTINNTKTFTDALA 190
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + I E+ I + +++ + LN +S + +++K + + + + + + A
Sbjct: 191 KNANIIEELGQNTGNINQIVTDAKDMMARLNAASVRVDAILAKTDKLLSSDDKDGVVAQA 250
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
+ + + R TS+ +++ + I +NLQ FS GL D+Q++V + ++ + + + ERN
Sbjct: 251 KATLESIRQTSDNLDKRLGPIADNLQRFSGQGLRDVQSVVVDSRRSIQRIEQAITDLERN 310
Query: 433 PQDIVWGREKGSVKIY 448
PQ +++G + G+V Y
Sbjct: 311 PQRLIFGGQ-GNVPRY 325
>gi|285019445|ref|YP_003377156.1| ABC transporter substrate-binding protein [Xanthomonas albilineans
GPE PC73]
gi|283474663|emb|CBA17162.1| putative abc transporter substrate-binding protein [Xanthomonas
albilineans]
Length = 308
Score = 122 bits (304), Expect = 1e-25, Method: Composition-based stats.
Identities = 50/297 (16%), Positives = 100/297 (33%), Gaps = 13/297 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D E + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVTGIALLLFGLWAAKYSS-DRTWQEYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A+ + TP+ T A + L G T I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVARIRVNSTTPIKSDTRANLGITSLTGPTIIQLSGGAPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD----------SSRHIQKIIE 170
+ A + + +I TPS + A +++ + ++
Sbjct: 120 APKL--TAIDNSDAPIIQTTPSALQNITDTANQIVERLDELLSKSNVASITATLHNLEKI 177
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ +S A + + + + +
Sbjct: 178 SGALADRDNGVQSLILSARDATRHLDATLNTANGTIQHLDQNLVKQLPPLLNKLEDTLSK 237
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + + EN ++ Q+ T+ ++R + ++V +++ +
Sbjct: 238 LDSAAGNADKILGENRSAINSFANDGLGQLGPTLTELRSLIRDLRQVSDRLEKNPAR 294
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/204 (11%), Positives = 71/204 (34%), Gaps = 3/204 (1%)
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + + Q + ++ + ++ + N+A
Sbjct: 108 PTIIQLSGGAPEAPKLTAIDNSDAPIIQTTPSALQNITDTANQIVERLDELLSKSNVASI 167
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
T+ + + + D+ + S I + + T +L+ + + ++ +K+
Sbjct: 168 TATLHNLEKISGALADRDNGVQSLILSARDATRHLDATLNTANGTIQHLDQNL-VKQLPP 226
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
L + + + ++ + + + +F+ GL + + +L+ + +
Sbjct: 227 LLNKLEDTLSKLDSAAGNADKILGENRSAINSFANDGLGQLGPTLTELRSLIRDLRQVSD 286
Query: 428 NFERNPQDIVWGREKGSVKIYKPK 451
E+NP + GR+ K +KPK
Sbjct: 287 RLEKNPARYLLGRDTP--KEFKPK 308
>gi|312115047|ref|YP_004012643.1| hypothetical protein Rvan_2320 [Rhodomicrobium vannielii ATCC
17100]
gi|311220176|gb|ADP71544.1| Mammalian cell entry related domain protein [Rhodomicrobium
vannielii ATCC 17100]
Length = 311
Score = 121 bits (303), Expect = 1e-25, Method: Composition-based stats.
Identities = 62/291 (21%), Positives = 117/291 (40%), Gaps = 5/291 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG+FV+ ++ IYW+ + G + + GSV G++ S V F
Sbjct: 1 METRANYLIVGIFVLGLIAALLGFIYWMKHDSD-GGDGKAYHVILDGSVQGITVASPVMF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI G + + L E +R DTP+ ++ A I QGLAG +E++ +
Sbjct: 60 NGIRFGAVRKIELLPEDTRKVRILISVRQDTPVRTNSHARISQQGLAGWVAMEITPGTPD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ E+ A+I+A P + + + + S + + +I N E L T+
Sbjct: 120 MPMLEPKPGEK--IAVISADPGASGSLFAGVSDAAGQASALAVRLNNLIANNEDSLHRTV 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
AN+ET + ++A I ++ + ++ S + + L +I Q
Sbjct: 178 ANLETFTGMMAERKDDIAAVIQNVRQLSEKLAAVSAKIDSAVDRLAGESSDNPNSIVSQV 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ Q+S D+ + + F+ + + L+
Sbjct: 238 QQAAISIRQLSEKLDKSVGDKSGALTQQADRSLREFELLAKDGRRLVDSLD 288
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 56/145 (38%), Gaps = 1/145 (0%)
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
N + + + + +++ I + I + ++ L S K + ++
Sbjct: 166 IANNEDSLHRTVANLETFTGMMAERKDDIAAVIQNVRQLSEKLAAVSAKIDSAVDRLAGE 225
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
S NS+ Q+A + R SEK+++ + L + L + + L + + V
Sbjct: 226 S-SDNPNSIVSQVQQAAISIRQLSEKLDKSVGDKSGALTQQADRSLREFELLAKDGRRLV 284
Query: 420 NHFDDCLNNFERNPQDIVWGREKGS 444
+ D + +RNP + G ++
Sbjct: 285 DSLDRVVQKIDRNPTGFLLGGQQSP 309
>gi|192293076|ref|YP_001993681.1| mammalian cell entry related domain protein [Rhodopseudomonas
palustris TIE-1]
gi|192286825|gb|ACF03206.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris TIE-1]
Length = 398
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 65/421 (15%), Positives = 135/421 (32%), Gaps = 34/421 (8%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG FV++ +F F ++WL ++ ++ V GL ++V F
Sbjct: 1 METRAPFVIVGAFVLAAIFAVFGFVFWLHNTSGVGART-SYHVQFRDPVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L + P A + P TP+ P T + QGL G+ +
Sbjct: 60 NGIRVGEVTALALAPDDPRRVDATIAVAPSTPVRPDTKVGLDFQGLTGVPVV-------- 111
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
A E ++ +A + + + ++ ++ R + ++ PL TI
Sbjct: 112 -------ALEGGKQLSGSAIATTLIAEPGAGMSMTQAAREALRKVDSVLGENSGPLKDTI 164
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+N +T S LA +D ++ + +++ +
Sbjct: 165 SNFKTFSEWLAGKTEKLDGILGGVERMTGANEPVVKKVVYDLSAATGFP----------- 213
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + + EV SD KM ++
Sbjct: 214 ---PSSPPLKGQLTIPESNTVVLFDSQKMLLAPGLEVPAFAGAQWSDSLPKMLQEKLIQS 270
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK-FAELMSKINNI 359
EN + + MR + + + + + S K + +
Sbjct: 271 FENYDIAHAPMRPNDAVQPDYQLLTDIRSFQVIGEGDALRAEIAFSAKIIDKDGKLVAAR 330
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
+ + + A+ F + + I + + SG +++ + T
Sbjct: 331 LFQQASPLDKPEPAAAVSAFDKSFDTIAKELVPWA---AQALASGHAEVEPAATTSRPTT 387
Query: 420 N 420
Sbjct: 388 A 388
>gi|167031177|ref|YP_001666408.1| hypothetical protein PputGB1_0156 [Pseudomonas putida GB-1]
gi|166857665|gb|ABY96072.1| Mammalian cell entry related domain protein [Pseudomonas putida
GB-1]
Length = 312
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 112/302 (37%), Gaps = 2/302 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GL V ++ + WL++S+ D + + +V GLS S V++
Sbjct: 1 METRAHHVLIGLVTVLVVAGAMLFGLWLAKSS-VDDAFKDYEVVFNEAVSGLSRGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + P LA+ + DTP+ T A + G+ G ++I+LS +
Sbjct: 60 NGIKVGDVSTLRLDPKDPRRVLARVRLSGDTPVKEDTQAKLTLAGVTGNSFIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + +P S+ T+ + + + +NI T
Sbjct: 120 SPELKGKDGKL-PVIIASPSPISRLLNDSSDLVTNINLLLHNANQMFSEDNIGHLSNTLA 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T + S + + QV +S + T+ L +
Sbjct: 179 NLDKTTGAFAGQHGSIAEAIEQLVQVGKQASATLAETQTLMRNANGLLGSEGKQAIGSAE 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ ++++ S+ + D + +++ L+ + E
Sbjct: 239 RAMQSLAESTATINNLLKNNSEAIGDGAQGLNQLTPAIRELRETLNALKGISRQLEADPS 298
Query: 301 LE 302
Sbjct: 299 GY 300
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/178 (16%), Positives = 67/178 (37%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ L+++ + + + +NI ++ + + Q I I
Sbjct: 139 PISRLLNDSSDLVTNINLLLHNANQMFSEDNIGHLSNTLANLDKTTGAFAGQHGSIAEAI 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + + + + LM N + E A+RAM + +++ IN + +
Sbjct: 199 EQLVQVGKQASATLAETQTLMRNANGLLGS-EGKQAIGSAERAMQSLAESTATINNLLKN 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ + GLN + +R+L+ET+N E +P + GR+ K ++P
Sbjct: 258 NSEAIGD-GAQGLNQLTPAIRELRETLNALKGISRQLEADPSGYLLGRDNN--KEFQP 312
>gi|146342152|ref|YP_001207200.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
ORS278]
gi|146194958|emb|CAL78983.1| Putative ABC transporter (substrate binding protein)
[Bradyrhizobium sp. ORS278]
Length = 366
Score = 121 bits (302), Expect = 2e-25, Method: Composition-based stats.
Identities = 67/390 (17%), Positives = 130/390 (33%), Gaps = 32/390 (8%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +G FV++ + F +YWL+ + GP ++ GSV GL ++V F
Sbjct: 1 METRAPFAVIGGFVLAAIVAIFGFVYWLNNTGGL-GPRTTYHVQFEGSVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L + P A + TP+ T + QGL G+ + L
Sbjct: 60 NGIRVGEVTELGLAPDNPRRVNATISVASSTPVRTDTKVGLEFQGLTGVPVVALEAGS-- 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
A S + ++ ++ D+ R + ++ PL TI
Sbjct: 118 --------------LTAAAPGSTLMAEPGAGQSMTQAARDALRRVDAVLAENAGPLKDTI 163
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN++T S LA N +D ++ +
Sbjct: 164 ANLKTFSDGLARNTGKLDGIVSGLEKMTGGGAPAQKVTYDLTA---------------PR 208
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + + + R ++ D L +D K+
Sbjct: 209 DLGPVNKTIKGQLAIPEPTAVAMLQTQRMLFSPAKDYPGFGDVLWADSIPKLLQARLIDT 268
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
EN + + +R+S ++ IN +++ S++ + I +
Sbjct: 269 FENYDVAHAPLRASDLGQPDVQLLIDVRRFRINVDATAVADIGLSARLVDKSGKIIASRL 328
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ + A+ F ++ + I
Sbjct: 329 FDESQPVGQINPADAVAAFDQAFGRLAKSI 358
>gi|158423839|ref|YP_001525131.1| ABC-type transport system protein [Azorhizobium caulinodans ORS
571]
gi|158330728|dbj|BAF88213.1| ABC-type transport system protein [Azorhizobium caulinodans ORS
571]
Length = 307
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 94/289 (32%), Gaps = 1/289 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ YT +G+F ++++ +F +YW + D + GSV GL ++V F
Sbjct: 1 METRANYTVIGIFTLAVIAAAFVFVYWFAGPKDSDKRK-LYEVLYQGSVSGLREGNAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGIPVG++ L L PN L + +R D P+ A++ +QG+ GI + + +
Sbjct: 60 NGIPVGQVTKLGLVPGAPNEVLVQIGVRNDVPILADARASLESQGITGIVAVSIQGGNAK 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I + + T + + ++ + + +
Sbjct: 120 AGPIPPGPNGLPRIEALGGTGMAGLLQNAQGTVAKVNSILDAIDPDQVRQIVANVENVSK 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + D + ++ + L
Sbjct: 180 QLSDNSGDIASMISGVKDAVAQVNEIAKKVDVVVVNLQHASGDKDGLLNQATEAATAVRK 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q ++ + S + + +I+ + +
Sbjct: 240 LADNLDQRTALLTNEISRFTGPGLRQYEALAADGRRTLTEIERVFRNLE 288
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 70/168 (41%), Gaps = 4/168 (2%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ LL + + + + + + + ++++D I S I+ +++ +
Sbjct: 141 MAGLLQNAQGTVAKVNSILDAIDPDQVRQIVANVENVSKQLSDNSGDIASMISGVKDAVA 200
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+N+ ++K ++ +N A + + L A A R ++ +++ + N + F
Sbjct: 201 QVNEIAKKVDVVV--VNLQHASGDKDGLLNQATEAATAVRKLADNLDQRTALLTNEISRF 258
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ GL + L + T+ + N ERNP+ ++G S+ Y
Sbjct: 259 TGPGLRQYEALAADGRRTLTEIERVFRNLERNPRQFIFGG--NSIPEY 304
>gi|300312194|ref|YP_003776286.1| organic solvents resistance ABC transporter periplasmic protein
[Herbaspirillum seropedicae SmR1]
gi|300074979|gb|ADJ64378.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component protein [Herbaspirillum
seropedicae SmR1]
Length = 305
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/296 (16%), Positives = 115/296 (38%), Gaps = 6/296 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + + + WL+++ Q D + + +V GLS S V++
Sbjct: 1 METRAHHVLIGLFTILVALGALGFCLWLTKAGQ-DRDVDYYTVIFNEAVSGLSRGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG +VGL LD P A+ + P+ T A + G+ G I+L+ +
Sbjct: 60 SGIKVGDVVGLSLDPADPRKVRARIRVVGRAPIKEDTGAKLALAGITGTALIQLTNGSPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI--IENIEKPLTT 178
+ + +I A+PS ++ +SN E+ +++ + ++ +N + T
Sbjct: 120 SPRLES---KDGSDPVIIASPSPLSALLSNGEDLLGNVNEVLINAKQFLAPDNARRLNAT 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
E ST+ A + M + ++ + + N + + ++
Sbjct: 177 LAHLEELTSTLAAQRNNAGAAMQELAEAARQANLAMQSANQLLSTRGNDAMSNLQQAMRS 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + ++ + + V ++ + + + S +
Sbjct: 237 LAASSQQVERLIQQNQAALNNGAQGVAEIGPAIAELRATLSSVRAVSRKLESNPGA 292
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 67/170 (39%), Gaps = 4/170 (2%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ LLS+ + + + N R + + + + + + N
Sbjct: 140 LSALLSNGEDLLGNVNEVLINAKQFLAPDNARRLNATLAHLEELTSTLAAQRNNAGAAMQ 199
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
L +++++ M N + + + N + Q+AM + +S+++ R I L N
Sbjct: 200 ELAEAARQANLAMQSANQLLSTR-GNDAMSNLQQAMRSLAASSQQVERLIQQNQAALNN- 257
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
G+ +I + +L+ T++ E NP + G + +V+ ++P
Sbjct: 258 GAQGVAEIGPAIAELRATLSSVRAVSRKLESNPGAYLLGHD--NVQEFQP 305
>gi|160872759|ref|ZP_02062891.1| ABC transport system periplasmic substrate binding protein
[Rickettsiella grylli]
gi|159121558|gb|EDP46896.1| ABC transport system periplasmic substrate binding protein
[Rickettsiella grylli]
Length = 265
Score = 121 bits (301), Expect = 3e-25, Method: Composition-based stats.
Identities = 55/229 (24%), Positives = 95/229 (41%), Gaps = 4/229 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K YT VG FV+ + I WLS + ++ + SV GL+ +S V++
Sbjct: 1 MDTKVNYTLVGAFVLILTMTLVIFIVWLS-TGISTKRYKHFLVIMHESVSGLAVNSPVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + ++L Q P I TP+ TTAT+ +QGL GI Y+ L
Sbjct: 60 NGVVVGSVKKIYLTQNNPEQVRLLLQIEEHTPVTEGTTATLNSQGLTGIVYVALKGSDTH 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ-KIIENIEKPLTTT 179
I ++ E+ +I +TPS + + ++ + I + L
Sbjct: 120 LNPIPRLHGEK--YPIIKSTPSFFFRLDHTLRDLNHNMNQITEDINGILGGENPILLKKI 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ N+ S LA D ++ T + S + + L ++
Sbjct: 178 LNNLSITSQHLAAQSKCFDTILINTARSSRSFPALMNTLSQQTLPSTNQ 226
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 60/190 (31%), Gaps = 4/190 (2%)
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM-RSSISAI 318
+ + +E + + +S+ + L+ + + R
Sbjct: 72 LTQNNPEQVRLLLQIEEHTPVTEGTTATLNSQGLTGIVYVALKGSDTHLNPIPRLHGEKY 131
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
I +T+ ++ N+N ++ ++ N I K N+L +Q
Sbjct: 132 PIIKSTPSFFFRLDHTLRDLNHNMNQITEDINGILGGENPILLKKILNNLSITSQHLAAQ 191
Query: 379 ---FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
F R S + SQ L ++ L ++ + ++ +NP
Sbjct: 192 SKCFDTILINTARSSRSFPALMNTLSQQTLPSTNQVLNNLSLITDNLLELSDHLRQNPSL 251
Query: 436 IVWGREKGSV 445
++ G++ +
Sbjct: 252 LIRGQKPPPL 261
>gi|148257021|ref|YP_001241606.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
BTAi1]
gi|146409194|gb|ABQ37700.1| Putative ABC transporter (substrate binding protein)
[Bradyrhizobium sp. BTAi1]
Length = 367
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 67/390 (17%), Positives = 128/390 (32%), Gaps = 31/390 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +G FV++ + F +YWL+ + GP ++ GSV GL ++V F
Sbjct: 1 METRAPFAVIGGFVLAAIVAIFGFVYWLNNTGGL-GPRTSYHVQFEGSVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L + P A + P+ T + QGL G
Sbjct: 60 NGIRVGEVTDLVLAPDNPRRVNATISVATSVPVRSDTKVGLEFQGLTG------------ 107
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ IA E + S + ++ ++ D+ R + ++ PL TI
Sbjct: 108 ---VPVIALEGGSSTATSGPVSILIAEPGAGQSMTQAARDALRRVDAVLAENAGPLKDTI 164
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+ T S LA N +D ++ + +
Sbjct: 165 ANLRTFSDGLARNTGKLDSIVSGLEKMTGGGAPAQKVTYDLRAPRDFGPI---------- 214
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + + R ++ D L +D K+
Sbjct: 215 -----AKTIKGQLAIPEPTAVAMLQTQRILFSPAKDYPGFGDALWADSIPKLLQARLIDA 269
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
EN + + +R++ ++ INT + S++ + I +
Sbjct: 270 FENYDIAHAPLRTADLGQPDVQLLVDVRRFRINTDPTAVVEIGLSARLVDKSGKIIASRL 329
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ D A+ F ++ + +
Sbjct: 330 FDESQPVDRLDPAIAVTAFDQAFGRVAKSL 359
>gi|39937296|ref|NP_949572.1| hypothetical protein RPA4236 [Rhodopseudomonas palustris CGA009]
gi|39651154|emb|CAE29677.1| Mce4/Rv3499c/MTV023.06c protein [Rhodopseudomonas palustris CGA009]
Length = 398
Score = 120 bits (300), Expect = 3e-25, Method: Composition-based stats.
Identities = 65/417 (15%), Positives = 133/417 (31%), Gaps = 34/417 (8%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG FV++ +F F ++WL ++ ++ V GL ++V F
Sbjct: 1 METRAPFVIVGAFVLAAIFAVFGFVFWLHNTSGVGART-SYHVQFRDPVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L + P A + P TP+ P T + QGL G+ +
Sbjct: 60 NGIRVGEVTALALAPDDPRRVDATIAVAPSTPVRPDTKVGLDFQGLTGVPVV-------- 111
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
A E ++ +A + + + ++ ++ R + ++ PL TI
Sbjct: 112 -------ALEGGKQLSGSAIATTLVAEPGAGMSMTQAAREALRKVDSVLGENSGPLKDTI 164
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN +T S LA +D ++ + +++ +
Sbjct: 165 ANFKTFSEWLAGKTEKLDGILGGVERMTGANEPVVKKVVYDLSAATGFPPPSP------- 217
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + EV SD KM ++
Sbjct: 218 -------PLKGQLTIPESNTVVLFDSQKMLLAPGLEVPAFAGAQWSDSLPKMLQEKLIQS 270
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK-FAELMSKINNI 359
EN + + MR + + + + + S K + +
Sbjct: 271 FENYDIAHAPMRPNDAVQPDYQLLTDIRSFQVIGEGDALRAEIAFSAKIIDKDGKLVAAR 330
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
+ + + A+ F + + I + + SG +++ +
Sbjct: 331 LFQQASPLDKPEPAAAVSAFDKSFDTIAKELVPWA---AQALASGRAEVEPAATTSR 384
>gi|153009439|ref|YP_001370654.1| hypothetical protein Oant_2109 [Ochrobactrum anthropi ATCC 49188]
gi|151561327|gb|ABS14825.1| Mammalian cell entry related domain protein [Ochrobactrum anthropi
ATCC 49188]
Length = 331
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F ++W++R + E+ +RIPGSV GLS S V F
Sbjct: 1 METKANYVLVGVFTLIVSLLAFAFVFWIARFGE-ARDSQELDVRIPGSVTGLSLGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD+ P + K + TP+ ST AT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRALKLDETNPEMVIVKTRVNATTPITRSTAATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + A I A PS IN ++ A++ + + + ++ +++ PLT TI
Sbjct: 120 EPNLLTEAANVDSVARIDADPSSINNLLATAQDIAARANAVLGQLEGFVKDARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA N + I ++ + + + + L + ++ +
Sbjct: 180 NNTKTFTDALAQNANIIQEL--GENTGNINQIVTDAKDMMARLNAASVRVDAILAKTDKL 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T ++ + + Q+
Sbjct: 238 LSSDDKDGVVAQAKATLESIRQTSDNLDKRMGPIADNLQRFSG 280
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK--ETSAFLENIADSTSNMR 312
S ++ + T Q++ + + +L +K + + N T +
Sbjct: 131 DSVARIDADPSSINNLLATAQDIAARANAVLGQLEGFVKDARGPLTDTINNTKTFTDALA 190
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + I+E+ + I + +++ + LN +S + +++K + + + + + + A
Sbjct: 191 QNANIIQELGENTGNINQIVTDAKDMMARLNAASVRVDAILAKTDKLLSSDDKDGVVAQA 250
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
+ + + R TS+ +++ + I +NLQ FS GL D+Q++V + ++ + + + ERN
Sbjct: 251 KATLESIRQTSDNLDKRMGPIADNLQRFSGQGLRDVQSVVVDSRRSIQRIEQAITDLERN 310
Query: 433 PQDIVWGREKGSVKIY 448
PQ +++G KG+V Y
Sbjct: 311 PQRLIFGG-KGNVPQY 325
>gi|325273984|ref|ZP_08140143.1| hypothetical protein G1E_12677 [Pseudomonas sp. TJI-51]
gi|324100873|gb|EGB98560.1| hypothetical protein G1E_12677 [Pseudomonas sp. TJI-51]
Length = 312
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 110/302 (36%), Gaps = 2/302 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GL V ++ + WL++S+ D + + +V GLS S V++
Sbjct: 1 METRAHHVLIGLVTVLVVAGAMLFGLWLTKSS-VDDAFKDYEVVFNEAVSGLSRGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + P LA+ + DTP+ T A + G+ G ++I+LS +
Sbjct: 60 NGIKVGDVSTLRLDPKDPRRVLARVRLSGDTPVKEDTQAKLTLAGVTGNSFIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + +P S+ T+ + + + NI+ T
Sbjct: 120 SPELKGKDGKL-PVIIASPSPISRLLNDSSDLVTNINLLLHNANQMFSEGNIDHLSNTLA 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T + S + QV +S + + L +
Sbjct: 179 NLDKTTGAFAGEHGSISQAIEQLVQVGKQASATLAETQVLMRNANGLLGTEGKQAIGSAE 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q ++++ S+ + D + +++ L+ + E
Sbjct: 239 QAMQSLAQSTATINSLLKDNSEAIGDGAQGLNQLTPAIRELRETLNALKGISRQLEADPS 298
Query: 301 LE 302
Sbjct: 299 GY 300
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 64/178 (35%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ L+++ + + + NI ++ + + + I I
Sbjct: 139 PISRLLNDSSDLVTNINLLLHNANQMFSEGNIDHLSNTLANLDKTTGAFAGEHGSISQAI 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + + + + LM N + E A++AM + ++ IN +
Sbjct: 199 EQLVQVGKQASATLAETQVLMRNANGLLGT-EGKQAIGSAEQAMQSLAQSTATINSLLKD 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ + GLN + +R+L+ET+N E +P + GR+ K ++P
Sbjct: 258 NSEAIGD-GAQGLNQLTPAIRELRETLNALKGISRQLEADPSGYLLGRDNN--KEFQP 312
>gi|154248036|ref|YP_001418994.1| hypothetical protein Xaut_4115 [Xanthobacter autotrophicus Py2]
gi|154162121|gb|ABS69337.1| Mammalian cell entry related domain protein [Xanthobacter
autotrophicus Py2]
Length = 307
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ YT +G F +++L +F +YW + A + GSV GL ++V F
Sbjct: 1 METRANYTIIGAFTLAVLAAAFGFVYWFAGPQDSSARKA-YEVLFDGSVAGLRQGNNVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
NGIPVG++ GL L P LA+ I D P+ TA + +QGL GI + +
Sbjct: 60 NGIPVGQVTGLGLVPGQPGQVLARVAINNDVPVLSDATAGLESQGLTGIVVVSIHGGH 117
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/197 (15%), Positives = 72/197 (36%), Gaps = 3/197 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + G + L++ + E N D + +
Sbjct: 112 SIHGGHPGAPPLPLGPNGVPRITADGGAGMSGLINSAQGVARKIEVVLDAINPQDIKNII 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + + + + + + S I + LN ++K ++ + A ++ + L
Sbjct: 172 ANIDTFSKAVASKSEDVASLIEQSNALVKQLNGVAEKVDRVVVNLQK--ATEDKDGLLVQ 229
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
A A + R ++ +++ + + F+ GL + L + T++ D L N ER
Sbjct: 230 ATDAATSVRKLADNLDQRTALLTEQVSRFTGPGLKQYEALATDGRRTLSEIDRVLRNIER 289
Query: 432 NPQDIVWGREKGSVKIY 448
NPQ ++G S+ Y
Sbjct: 290 NPQQFIFGG-GNSIPKY 305
>gi|120554122|ref|YP_958473.1| hypothetical protein Maqu_1195 [Marinobacter aquaeolei VT8]
gi|120323971|gb|ABM18286.1| Mammalian cell entry related domain protein [Marinobacter aquaeolei
VT8]
Length = 312
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 101/292 (34%), Gaps = 6/292 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME K ++ +G F ++ + + WL +S+ D A I V GL+ + V +
Sbjct: 1 MEPKAHHVIIGFFTLAAVIAALLFALWLGKSST-DTNWAYYRIGFDHPVGGLAKGNPVLY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG ++ L L + P H + D P+ +T A + + G I+ + +
Sbjct: 60 TGVPVGDVLDLTLAPDNPAHVRVLVRVNQDIPVRENTRAGLVLANITGSMSIQFTGGTPD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +I A PS + ++N E K + +++ I
Sbjct: 120 SPILEGH---KANPPLIAAEPSAFSNLLTNGEAMLGKAEQLLENANRLMSEDNLSNIAEI 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ--K 238
++ + + T + S + + + ++
Sbjct: 177 LENARQASESLLASRDELEALMTRFDEAGIRAEEAAIKVSAAADRSREVLDERVEPVLLA 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+++ L +Q + + + + + +++ L + +S
Sbjct: 237 MSRALTTLQPTLDRLDTLTGDNELALDAGLQGLGEITPALRELRSTLRNLNS 288
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/176 (13%), Positives = 69/176 (39%), Gaps = 4/176 (2%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
F + + +L +++ +N+++ + ++ A + R ++ + +
Sbjct: 140 FSNLLTNGEAMLGKAEQLLENANRLMSEDNLSNIAEILENARQASESLLASRDELEALMT 199
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ +++ K + + + + L RA+ T + T ++++
Sbjct: 200 RFDEAGIRAEEAAIKVSAAADRSREVLDERVEPVLLA-MSRALTTLQPTLDRLDTLTGDN 258
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
L + GL +I +R+L+ T+ + + E++P +WG +K Y+
Sbjct: 259 ELAL-DAGLQGLGEITPALRELRSTLRNLNSFTRRLEQDPTGTLWGGTG--IKEYE 311
>gi|148560680|ref|YP_001258962.1| putative ABC transporter periplasmic substrate-binding protein
[Brucella ovis ATCC 25840]
gi|148371937|gb|ABQ61916.1| putative ABC transporter, periplasmic substrate-binding protein
[Brucella ovis ATCC 25840]
Length = 331
Score = 120 bits (300), Expect = 4e-25, Method: Composition-based stats.
Identities = 67/283 (23%), Positives = 123/283 (43%), Gaps = 3/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F + + +F +YW++R + + +RI GSV GL S V F
Sbjct: 1 METKANYVLVGVFTLLVSLLAFGFVYWIARYGE-ARDSLPLDVRIQGSVTGLGIGSQVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD P + + + TP+ STTAT+ QGL G YIEL R +
Sbjct: 60 NGIKVGDVRRLHLDDSNPGMVIVQTHVNATTPITRSTTATLGFQGLTGQAYIELKGGRLD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + + A I A S +N ++ A++ + + ++ ++ +++ PLT TI
Sbjct: 120 EPNLLTEAAKEDTVARIDADLSAVNNLLATAQDIAARANNVLSQLEGFVKDARGPLTDTI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N +T + LA+N I ++ + + + L + K+ ++
Sbjct: 180 NNTKTFTQALADNADIIQELGQNASNIRQI--VVDAKDMMARLNAASVKVESILNKTDKM 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + T ++ +
Sbjct: 238 LSADDKNGLVAQAITTLQSIRETSNNFEARLAPIANNLDRFSG 280
Score = 93.1 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 82/202 (40%), Gaps = 6/202 (2%)
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + V N + ++ V +++ + D + + N
Sbjct: 130 EDTVARIDADLSAVNNLLATAQDIAARANNVLSQLEGFVKDARG-----PLTDTINNTKT 184
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
T + + I+E+ I + +++ + LN +S K +++K + + + + N
Sbjct: 185 FTQALADNADIIQELGQNASNIRQIVVDAKDMMARLNAASVKVESILNKTDKMLSADDKN 244
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
L A + + R+TS + I NNL FS GL ++Q +V + + + +
Sbjct: 245 GLVAQAITTLQSIRETSNNFEARLAPIANNLDRFSGQGLREMQGVVIDSRRAIQRIEQVI 304
Query: 427 NNFERNPQDIVWGREKGSVKIY 448
ERNPQ +++G GSV Y
Sbjct: 305 TELERNPQRLIFGG-PGSVPQY 325
>gi|92117462|ref|YP_577191.1| hypothetical protein Nham_1923 [Nitrobacter hamburgensis X14]
gi|91800356|gb|ABE62731.1| Mammalian cell entry related protein [Nitrobacter hamburgensis X14]
Length = 369
Score = 120 bits (299), Expect = 5e-25, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 1/118 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +G FV++ + F +YWL + GP A ++ GSV GL ++V F
Sbjct: 1 METRAPFVIIGAFVLAAIAAVFGFVYWLHNTGGL-GPRATYHVQFEGSVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
NGI VG + L L + P+ A + TP+ T + QGL G+ + L +
Sbjct: 60 NGIRVGEVTELSLAPDNPHRVDAAIAVTSTTPVRSDTKVGLEFQGLTGVPVVALEGGQ 117
>gi|163744193|ref|ZP_02151553.1| Putative ABC transporter, periplasmic substrate-binding protein
[Oceanibulbus indolifex HEL-45]
gi|161381011|gb|EDQ05420.1| Putative ABC transporter, periplasmic substrate-binding protein
[Oceanibulbus indolifex HEL-45]
Length = 571
Score = 120 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 50/397 (12%), Positives = 125/397 (31%), Gaps = 19/397 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +G F ++I+ + WLS Q D A I V GL +V F
Sbjct: 1 METRANFILIGAFTLAIIIGTLGFFIWLSSV-QIDRQYATYGILF-DDVSGLDPSGNVLF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG++ G+ + ++ + I TP+ +T A +++QG+ G+ YI LS
Sbjct: 59 NGISVGKVTGINIHEDDASKVFVTIEIDSSTPVRANTVAQVQSQGVTGVAYISLSGGTPG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ + PS + E+ + ++ + ++ +
Sbjct: 119 AAPL------EAEQDGLPMIPSERSTVQLLVEDAPDLMVQANDLMAQLQALLGP------ 166
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T +A + +++ + SL
Sbjct: 167 ----ENQTRVAGILQNLESSSGRLDQALTDFSEISGTVNEATAQISLFTDKLDSITGSAQ 222
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
L + + + + +++ + + LL + + +
Sbjct: 223 ATLGRADAALASAQSAFETAESSMAATDSAIRNVEGTFDAAQVLLRNTLPPLLEDLSHTI 282
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ + + + + + + ++ + + + + +
Sbjct: 283 GRADDAIADLQQRGGATLDGVAETSGLLNARLSDLGQTLDEADRAFVSVTSAADSFD-ML 341
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
E + +A+ + T E + + S +
Sbjct: 342 VSGEGAQMVTEARTVLGTANVALETLEGLVQSDIPAV 378
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/182 (9%), Positives = 57/182 (31%), Gaps = 9/182 (4%)
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
DV T F + + + L ++ + + S + + ++ + +
Sbjct: 399 DVTGATTRFVPITAQAEAALGSANALFERAQLSLSRLDTTLAGTDGALASAETALDAVSG 458
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK 385
+ ++ + S ++ + ++ D + +
Sbjct: 459 VIQTDFAPVLMDLRTASERISIAVEDVTR---------DVPAIAADLRGLIARADTVVAS 509
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSV 445
I + L NF+++GL ++ L + + V ++ + + +P + +
Sbjct: 510 AQSAIDATAPGLGNFARTGLPELTRLSAEARGLVATLNNLVRRIDSDPARFLLDKRVPDY 569
Query: 446 KI 447
+
Sbjct: 570 RR 571
>gi|115523757|ref|YP_780668.1| hypothetical protein RPE_1739 [Rhodopseudomonas palustris BisA53]
gi|115517704|gb|ABJ05688.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris BisA53]
Length = 384
Score = 120 bits (298), Expect = 6e-25, Method: Composition-based stats.
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG FV++ + F ++WL S+ + GSV GL ++V F
Sbjct: 1 METRAPFILVGAFVLAAIGAVFGFVFWLHNSSGLGART-SYQVHFNGSVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L + P A + TP+ T + QGL G+ I L ++
Sbjct: 60 NGIRVGEVTALGLAPDDPRQVNASIAVDVATPVRADTKVGLDFQGLTGVPVIALEGGSQK 119
Query: 121 KKTIFQIATERNQRAMITATPSGIN 145
+ + A + T + +
Sbjct: 120 TASGPVPTLIADPGAGQSMTQAARD 144
>gi|152987511|ref|YP_001347294.1| hypothetical protein PSPA7_1913 [Pseudomonas aeruginosa PA7]
gi|150962669|gb|ABR84694.1| hypothetical protein PSPA7_1913 [Pseudomonas aeruginosa PA7]
Length = 312
Score = 120 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 57/293 (19%), Positives = 120/293 (40%), Gaps = 7/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S +G I +V GLS SSV++
Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGS-EGKFNYYDIVFNEAVSGLSQGSSVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD + P A+ + P+ TTA + G+ G + I+LS+
Sbjct: 60 SGIKVGDVAFLRLDPQDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD-SSRHIQKIIENIEKPLTTT 179
+ + + +I ATPS + +SN E+ I+ +R + E ++ T
Sbjct: 120 SPMLEG---KDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENSARISRT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++ + L+ ++ +M S + ++L+ + + ++ +
Sbjct: 177 LDHLDQATGALSAERENVSAVMQQLA--QASKQANAALAQASELMRNANGLLNEQGKGML 234
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + + H + Q E+G + L ++
Sbjct: 235 ENASKTMASLERTSATLDQLISENRHSLDGGIQGIAELGPAVSELRDTLAALR 287
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ + L+ + + + EN A + + A ++ +R+ +
Sbjct: 135 ATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENSARISRTLDHLDQATGALSAERENV 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N + + +ELM N + ++ + ++A + M + TS +++
Sbjct: 195 SAVMQQLAQASKQANAALAQASELMRNANGLLN-EQGKGMLENASKTMASLERTSATLDQ 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
I ++L G+ ++ V +L++T+ E NP + + GREK K +
Sbjct: 254 LISENRHSLDG-GIQGIAELGPAVSELRDTLAALRGISRRLEENPANYLLGREKT--KEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|49085066|gb|AAT51249.1| PA3213 [synthetic construct]
Length = 313
Score = 120 bits (298), Expect = 7e-25, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 120/295 (40%), Gaps = 9/295 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S +G I +V GLS SSV++
Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGS-EGKFNYYDIVFNEAVSGLSQGSSVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD + P A+ + P+ TTA + G+ G + I+LS+
Sbjct: 60 SGIKVGDVAFLRLDPKDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPA 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + +I ATPS + +SN E+ I+ ++ T
Sbjct: 120 SPMLEG---KDGKIPVIVATPSPLTQSLSNGEDLMGNINQLIARFSNLLSE-----ENTA 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T+ + + + + + V + + N + L + + ++
Sbjct: 172 RISRTLDHLDQATGALSAERENVSAVMQQLAQASRQANAALAQASELMRSANGLLNEQGK 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+LEN + + ++S + + + R + + ++ +S+ + +
Sbjct: 232 GMLENANKTMASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAAL 286
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 74/182 (40%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T + + L+ + + + EN A + + A ++ +R+ +
Sbjct: 135 ATPSPLTQSLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHLDQATGALSAERENV 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N + + +ELM N + ++ + ++A + M + TS +++
Sbjct: 195 SAVMQQLAQASRQANAALAQASELMRSANGLLN-EQGKGMLENANKTMASLERTSATLDQ 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
I ++L GL ++ V +L++T+ E NP + + GREK K +
Sbjct: 254 LISENRHSLDG-GIQGLAELGPAVSELRDTLAALRGISRRLEENPANYLLGREKT--KEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|15598409|ref|NP_251903.1| hypothetical protein PA3213 [Pseudomonas aeruginosa PAO1]
gi|107102743|ref|ZP_01366661.1| hypothetical protein PaerPA_01003810 [Pseudomonas aeruginosa PACS2]
gi|116051203|ref|YP_789966.1| hypothetical protein PA14_22660 [Pseudomonas aeruginosa UCBPP-PA14]
gi|218890594|ref|YP_002439458.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa
LESB58]
gi|254236175|ref|ZP_04929498.1| hypothetical protein PACG_02140 [Pseudomonas aeruginosa C3719]
gi|254241901|ref|ZP_04935223.1| hypothetical protein PA2G_02622 [Pseudomonas aeruginosa 2192]
gi|9949333|gb|AAG06601.1|AE004744_16 hypothetical protein PA3213 [Pseudomonas aeruginosa PAO1]
gi|115586424|gb|ABJ12439.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126168106|gb|EAZ53617.1| hypothetical protein PACG_02140 [Pseudomonas aeruginosa C3719]
gi|126195279|gb|EAZ59342.1| hypothetical protein PA2G_02622 [Pseudomonas aeruginosa 2192]
gi|218770817|emb|CAW26582.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa
LESB58]
Length = 312
Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 120/295 (40%), Gaps = 9/295 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S +G I +V GLS SSV++
Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGS-EGKFNYYDIVFNEAVSGLSQGSSVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD + P A+ + P+ TTA + G+ G + I+LS+
Sbjct: 60 SGIKVGDVAFLRLDPKDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPA 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + +I ATPS + +SN E+ I+ ++ T
Sbjct: 120 SPMLEG---KDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSE-----ENTA 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T+ + + + + + V + + N + L + + ++
Sbjct: 172 RISRTLDHLDQATGALSAERENVSAVMQQLAQASRQANAALAQASELMRSANGLLNEQGK 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+LEN + + ++S + + + R + + ++ +S+ + +
Sbjct: 232 GMLENANKTMASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAAL 286
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ + L+ + + + EN A + + A ++ +R+ +
Sbjct: 135 ATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHLDQATGALSAERENV 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N + + +ELM N + ++ + ++A + M + TS +++
Sbjct: 195 SAVMQQLAQASRQANAALAQASELMRSANGLLN-EQGKGMLENANKTMASLERTSATLDQ 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
I ++L GL ++ V +L++T+ E NP + + GREK K +
Sbjct: 254 LISENRHSLDG-GIQGLAELGPAVSELRDTLAALRGISRRLEENPANYLLGREKT--KEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|300917989|ref|ZP_07134615.1| virulence factor Mce family protein [Escherichia coli MS 115-1]
gi|300414815|gb|EFJ98125.1| virulence factor Mce family protein [Escherichia coli MS 115-1]
Length = 312
Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 125/293 (42%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ S D I V GLS S+V++
Sbjct: 1 METRAHHVVIGLFTLIVVSAALLFCLWLTNSGS-DRQFRLYDIVFNEPVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD++ PN A+ + TP+ T A + G+ G + I+ S+ +
Sbjct: 60 SGIRVGEVTQLRLDRDNPNKVWARIRVSASTPIREDTQARLTVAGITGTSNIQFSSGSQT 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + ++ +I ATPS ++ ++N EN ++ + +++ + TT
Sbjct: 120 SPLLEG---KDDEVPIIIATPSPMSQLLANGENFMTNANEVLVRLNQLLAPDNQQRLVTT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ ++ +A+ + ++ + ++++ N + L +
Sbjct: 177 LDNLALVTQTVADQRGDLRTLLQQLAQASKQANETLTQTNRLLRNANGLMDGQGKQLVSD 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K + ++++ + ++ L+ +
Sbjct: 237 AAKTMASLQNTSTILNKLVSENKTSLNNGMQGMNELGPAVDELRRTLATLRAA 289
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 76/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +++ + + +N + + + + + DQR +
Sbjct: 135 ATPSPMSQLLANGENFMTNANEVLVRLNQLLAPDNQQRLVTTLDNLALVTQTVADQRGDL 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N++ + L+ N + + L DA + M + ++TS +N+
Sbjct: 195 RTLLQQLAQASKQANETLTQTNRLLRNANGLM-DGQGKQLVSDAAKTMASLQNTSTILNK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVSENKTSLNN-GMQGMNELGPAVDELRRTLATLRAAVSRLEENPAALLRGRERT--QEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|254488024|ref|ZP_05101229.1| mce related protein [Roseobacter sp. GAI101]
gi|214044893|gb|EEB85531.1| mce related protein [Roseobacter sp. GAI101]
Length = 571
Score = 119 bits (297), Expect = 8e-25, Method: Composition-based stats.
Identities = 73/447 (16%), Positives = 152/447 (34%), Gaps = 34/447 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +G F + + + WL+ Q D A I V GL V F
Sbjct: 1 METRANFILIGAFFLLSIIGTLGFFIWLASV-QIDRQYATYGILF-DDVSGLDPSGDVLF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG+++GL + + P+ L I TP+ T A +++QG+ G+ YI LS
Sbjct: 59 NGISVGKVIGLEIYPQNPSKVLTTIEIDTATPVTSGTIAQLQSQGVTGVAYISLSGDALG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I T MI + S + + +A + + ++ + Q + + T I
Sbjct: 119 TAPIEMPDT---GLPMIASKRSTVQALVQDAPDLLAQANELLKQFQSLTSPENQVYVTRI 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
S+ + + +T + ++ T V
Sbjct: 176 LRNLDTSSARLDQALTDFSSITSTVGEATAQITQFTGRL-------------DSIGASVQ 222
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
L + + ++ D T+ D Q+ + + + +L D ++ S ++A
Sbjct: 223 TTLTKSNTALDAAQRAFDTADKTLIDSGAAIQSVEGTFTQAEQILRDRIPEILSDISAAV 282
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
A + S + D + + + +E + N + + + +
Sbjct: 283 ARTDAAIVDLQKRSADTLDGFGDTASLLNARLTELEQTLAEANIAFVAVTDASDSFDALV 342
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ L DA+ + + I + + D+ ++ ++ V
Sbjct: 343 -TGDGTMLVGDARAVLADAKVAIATIQNVV--------------VQDVPVIMADIRAAVA 387
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKI 447
D ++ ++ + GR V
Sbjct: 388 TASDAVDRVAQDVTG-LTGRFDPLVAE 413
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 68/218 (31%), Gaps = 12/218 (5%)
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
I V + + +SD V DV T F + + + L+ ++
Sbjct: 365 ATIQNVVVQDVPVIMADIRAAVATASDAVDRVAQDVTGLTGRFDPLVAEAEQALASANAL 424
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ S + A ++ + + + ++ + + S +
Sbjct: 425 FVRAQGSLGTLDTALDSAQGALASAEAAFDGATDVLRTDVGPMLSDLRTASDRISVAVED 484
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
+ I ++ D + + ++ + + + F+++GL ++ L
Sbjct: 485 VTRDI---------PAIATDLRALIGRADAVVAQVQGAVSASAPGIGAFAKTGLPELTRL 535
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ + V+ + ERNP + V Y+
Sbjct: 536 SAEARSLVSTLNSLARRIERNPAGFIL---DNRVPEYR 570
>gi|296388300|ref|ZP_06877775.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa
PAb1]
Length = 312
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 58/293 (19%), Positives = 120/293 (40%), Gaps = 7/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S +G I +V GLS SSV++
Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGS-EGKFNYYDIVFNEAVSGLSQGSSVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD + P A+ + P+ TTA + G+ G + I+LS+
Sbjct: 60 SGIKVGDVAFLRLDPQDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPA 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD-SSRHIQKIIENIEKPLTTT 179
+ + + +I ATPS + +SN E+ I+ +R + E ++ T
Sbjct: 120 SPMLEG---KDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++ + L+ ++ +M S + ++L+ S + ++ +
Sbjct: 177 LDHLDQATGALSAERENVSAVMQQLA--QASRQANAALAQASELMRSANGLLNEQGKGMM 234
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + + H + Q E+G + L ++
Sbjct: 235 ENANKTMASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAALR 287
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ + L+ + + + EN A + + A ++ +R+ +
Sbjct: 135 ATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHLDQATGALSAERENV 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N + + +ELM N + ++ + ++A + M + TS +++
Sbjct: 195 SAVMQQLAQASRQANAALAQASELMRSANGLLN-EQGKGMMENANKTMASLERTSATLDQ 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
I ++L GL ++ V +L++T+ E NP + + GREK K +
Sbjct: 254 LISENRHSLDG-GIQGLAELGPAVSELRDTLAALRGISRRLEENPANYLLGREKT--KEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|313108530|ref|ZP_07794531.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa
39016]
gi|310881033|gb|EFQ39627.1| ABC-type transporter, periplasmic component [Pseudomonas aeruginosa
39016]
Length = 312
Score = 119 bits (297), Expect = 9e-25, Method: Composition-based stats.
Identities = 56/295 (18%), Positives = 120/295 (40%), Gaps = 9/295 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S +G I +V GLS SSV++
Sbjct: 1 METRAHHVLIGLFSVIVIGAALLFGLWLAKSGS-EGKFNYYDIVFNEAVSGLSQGSSVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD + P A+ + P+ TTA + G+ G + I+LS+
Sbjct: 60 SGIKVGDVAFLRLDPQDPRKVWARIRVVASAPIKQDTTAKLALTGITGTSIIQLSSGTPA 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + +I ATPS + +SN E+ I+ ++ T
Sbjct: 120 SPMLEG---KDGKIPVIVATPSPLTQLLSNGEDLMGNINQLIARFSNLLSE-----ENTA 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T+ + + + + + V + + N + L + + ++
Sbjct: 172 RISRTLDHLDQATGALSAERENVSAVMQQLAQASRQANAALAQASELMRSANGLLNEQGK 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+LEN + + ++S + + + R + + ++ +S+ + +
Sbjct: 232 GMLENANKTMASLERTSATLDQLISENRHSLDGGIQGLAELGPAVSELRDTLAAL 286
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ + L+ + + + EN A + + A ++ +R+ +
Sbjct: 135 ATPSPLTQLLSNGEDLMGNINQLIARFSNLLSEENTARISRTLDHLDQATGALSAERENV 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N + + +ELM N + ++ + ++A + M + TS +++
Sbjct: 195 SAVMQQLAQASRQANAALAQASELMRSANGLLN-EQGKGMLENANKTMASLERTSATLDQ 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
I ++L GL ++ V +L++T+ E NP + + GREK K +
Sbjct: 254 LISENRHSLDG-GIQGLAELGPAVSELRDTLAALRGISRRLEENPANYLLGREKT--KEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|238791988|ref|ZP_04635624.1| hypothetical protein yinte0001_8880 [Yersinia intermedia ATCC
29909]
gi|238728619|gb|EEQ20137.1| hypothetical protein yinte0001_8880 [Yersinia intermedia ATCC
29909]
Length = 312
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 124/293 (42%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ S D I V GLS S+V++
Sbjct: 1 METRAHHVVIGLFTLIVVSAALLFCLWLTNSGS-DRQFRLYDIVFNEPVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD++ P+ A+ + TP+ T A + G+ G + I+ S+ +
Sbjct: 60 SGIRVGEVTQLRLDRDNPSKVWARIRVSASTPIREDTQARLTVAGITGTSNIQFSSGSQT 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + ++ +I ATPS ++ ++N EN ++ + +++ + TT
Sbjct: 120 SPLLEG---KDDEVPIIIATPSPMSQLLANGENFMTNANEVLVRLNQLLAPDNQQRLVTT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ ++ +A+ + ++ + ++++ N + L +
Sbjct: 177 LDNLALVTQTVADQRGDLRTLLQQLAQASKQANETLTQTNRLLRNANGLMDGQGKQLVSD 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K + ++++ ++ L+ +
Sbjct: 237 AAKTMASLQNTSAILDKLVSENKTSLNNGMRGMNELGPAVDELRRTLATLRAA 289
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 76/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +++ + + +N + + + + + DQR +
Sbjct: 135 ATPSPMSQLLANGENFMTNANEVLVRLNQLLAPDNQQRLVTTLDNLALVTQTVADQRGDL 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N++ + L+ N + + L DA + M + ++TS +++
Sbjct: 195 RTLLQQLAQASKQANETLTQTNRLLRNANGLM-DGQGKQLVSDAAKTMASLQNTSAILDK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVSENKTSLNN-GMRGMNELGPAVDELRRTLATLRAAVSRLEENPAALLRGRERT--QEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|330501344|ref|YP_004378213.1| hypothetical protein MDS_0430 [Pseudomonas mendocina NK-01]
gi|328915630|gb|AEB56461.1| hypothetical protein MDS_0430 [Pseudomonas mendocina NK-01]
Length = 305
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/290 (18%), Positives = 111/290 (38%), Gaps = 4/290 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME K ++ +GLF V + + WL+++ D + + +V GLS S+V++
Sbjct: 1 MEPKAHHVLIGLFTVLTVGAALLFGLWLNKAGA-DRAFTDYEVIFNEAVTGLSQGSAVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG +V L LD + P A+ I +TP+ T A + G+ G+ I+L E
Sbjct: 60 SGIKVGDVVSLGLDPDDPRTVRARIRIVGNTPIKQDTRARLAITGITGLAVIQLHGGSPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + S + + S +R + + + ++ T+
Sbjct: 120 SPPLEGKDGQPGIIIADRSPLS--RLMANGEDLVSNITRLLNRANRMLSRENAERVSRTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQ-VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
N+E + +A+ + + + T T ++ N + D S + +
Sbjct: 178 ENLEQATAGIADQREELGEALRQTSAATREAAALMKNANQLLDSQGSQVLESAERLMASL 237
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + I+ N + D + + D+ T +E +
Sbjct: 238 ERSSQTIEQLLQNNRGALDSGMQGLSDLGPTISELRETLGALRGFSRRLE 287
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 66/170 (38%), Gaps = 4/170 (2%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ L+++ + + N S N + + I +
Sbjct: 140 LSRLMANGEDLVSNITRLLNRANRMLSRENAERVSRTLENLEQATAGIADQREELGEALR 199
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ ++++ A LM N + + + + + A+R M + +S+ I + + + L +
Sbjct: 200 QTSAATREAAALMKNANQLL-DSQGSQVLESAERLMASLERSSQTIEQLLQNNRGALDS- 257
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
GL+D+ + +L+ET+ E++P + + S+K ++P
Sbjct: 258 GMQGLSDLGPTISELRETLGALRGFSRRLEQDPSGYLLRSD--SIKEFQP 305
>gi|238754552|ref|ZP_04615906.1| hypothetical protein yruck0001_4200 [Yersinia ruckeri ATCC 29473]
gi|238707183|gb|EEP99546.1| hypothetical protein yruck0001_4200 [Yersinia ruckeri ATCC 29473]
Length = 312
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 127/293 (43%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ + + I V GLS S+V++
Sbjct: 1 METRAHHVIIGLFTLIVVSAALLFCLWLTNAGS-NSQFRLYDIVFNEPVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD++ PN A+ + TP+ T A + G+ G + I+ S+ +
Sbjct: 60 SGIRVGEVTQLRLDKDNPNKVWARIRVSASTPVRQDTQARLTVAGITGTSNIQFSSGSQG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ E + +I ATPS ++ ++N EN +++ + +++ + T
Sbjct: 120 SPRLEG---EDGEIPVIVATPSPMSQLLANGENFMSNVNEVLVRLNQLLAPDNQQRLVKT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+E ++ +A+ + M+ + ++D+ N + L + L
Sbjct: 177 LENLELVTQTVADQREDLRTMLQQLAQASKQANDTLAQTNRLLRNTNGLVEGQGKQLLSD 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K ++ ++++ + ++ L+ +
Sbjct: 237 AAKTMASLQNTSVILNKLVNENKTSLNNGMQGMNELGPAVDELRRTLATLRAA 289
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 76/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +S+ + + +N + + + + DQR+ +
Sbjct: 135 ATPSPMSQLLANGENFMSNVNEVLVRLNQLLAPDNQQRLVKTLENLELVTQTVADQREDL 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + ND+ + L+ N + + L DA + M + ++TS +N+
Sbjct: 195 RTMLQQLAQASKQANDTLAQTNRLLRNTNGLV-EGQGKQLLSDAAKTMASLQNTSVILNK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVNENKTSLNN-GMQGMNELGPAVDELRRTLATLRAAVSRLEENPAALLRGRERT--QEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|238789961|ref|ZP_04633740.1| hypothetical protein yfred0001_37280 [Yersinia frederiksenii ATCC
33641]
gi|238721909|gb|EEQ13570.1| hypothetical protein yfred0001_37280 [Yersinia frederiksenii ATCC
33641]
Length = 313
Score = 119 bits (296), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/293 (18%), Positives = 122/293 (41%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ + D I V GLS S+V++
Sbjct: 1 METRAHHVVIGLFTLIVVSAALLFCLWLTGAGS-DRQFRFYDIVFNEPVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD++ PN A+ + TP+ T A + G+ G + I+ S+ +
Sbjct: 60 SGIRVGEVTQLRLDRDNPNKVWARIRVSASTPIREDTQARLTVAGITGTSNIQFSSSSQS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + +I ATPS ++ ++N EN ++ + +++ + TT
Sbjct: 120 SPLLESH---DGEVPVIVATPSPMSQLLANGENFMSNANEVLVRLNQLLAPDNQQRLITT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ ++ +A+ I M+ + ++++ N + L +
Sbjct: 177 LDNLALVTQTVADQRQDIRTMLQQLAQASKQANETLTQTNRLLRNANGLMDGQGKQLMND 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K + ++++ + ++ L +
Sbjct: 237 AAKTMASLQNTSTILSKLVSENKTSLNNGMQGMNELGPAVDELRRTLMTLRAA 289
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +S+ + + +N + + + + + DQRQ I
Sbjct: 135 ATPSPMSQLLANGENFMSNANEVLVRLNQLLAPDNQQRLITTLDNLALVTQTVADQRQDI 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N++ + L+ N + + L DA + M + ++TS +++
Sbjct: 195 RTMLQQLAQASKQANETLTQTNRLLRNANGLM-DGQGKQLMNDAAKTMASLQNTSTILSK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVSENKTSLNN-GMQGMNELGPAVDELRRTLMTLRAAVSRLEENPAALLRGRERT--QEF 310
Query: 449 KPK 451
P+
Sbjct: 311 TPR 313
>gi|154252956|ref|YP_001413780.1| hypothetical protein Plav_2514 [Parvibaculum lavamentivorans DS-1]
gi|154156906|gb|ABS64123.1| Mammalian cell entry related domain protein [Parvibaculum
lavamentivorans DS-1]
Length = 302
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 58/307 (18%), Positives = 120/307 (39%), Gaps = 5/307 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME K+ +G+F + + F + W+S Q++ A I GSV GLS V++
Sbjct: 1 MEIKSNNVLIGVFTLVTVVGMFLFLLWISGV-QFNRQFAYYKIIFDGSVSGLSQSGPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+PVG++ L+L PN +A + TP+ + A + GL G+ +I+L+ E
Sbjct: 60 NGLPVGKVTDLYLMARNPNKVVAIIQVDARTPVKEDSVAQLELSGLTGVAFIQLTGGSPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A +I A PS + + + T + ++ + + K++ + ++ ++ +
Sbjct: 120 SAELQ--ARPGQDYPVIKAAPSSLQDLLKSGPETLQNANELIKELNKVVADNQRSISEAL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+ TIS LA++ + + S + + L+ K A +
Sbjct: 178 ANLNTISKALADSSGDVTTALDQIA--QASRHLNSISRSADGLMKEDVKAFIADAREAAR 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
E + + + + + + + + +D S
Sbjct: 236 SYREVANELDAILKQGGPGIASGLSQLPQLVAETRALVSSLDRFASRAQDDPARYFIGRD 295
Query: 301 LENIADS 307
+ +
Sbjct: 296 VPEVEAE 302
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/142 (14%), Positives = 56/142 (39%), Gaps = 5/142 (3%)
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
N RS A+ + + + + + + +S+ + + + ++
Sbjct: 164 KVVADNQRSISEALANLNTISKALADSSGDVTTALDQIAQASRHLNSISRSADGLMK-ED 222
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
+ DA+ A ++R+ + +++ + G + SGL+ + LV + + V+ D
Sbjct: 223 VKAFIADAREAARSYREVANELDAILKQGGPGIA----SGLSQLPQLVAETRALVSSLDR 278
Query: 425 CLNNFERNPQDIVWGREKGSVK 446
+ + +P GR+ V+
Sbjct: 279 FASRAQDDPARYFIGRDVPEVE 300
>gi|146305411|ref|YP_001185876.1| hypothetical protein Pmen_0371 [Pseudomonas mendocina ymp]
gi|145573612|gb|ABP83144.1| Mammalian cell entry related domain protein [Pseudomonas mendocina
ymp]
Length = 305
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 52/314 (16%), Positives = 116/314 (36%), Gaps = 16/314 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + ++ +GLF V + + WL+++ D + + +V GLS S+V++
Sbjct: 1 MEPRAHHVLIGLFTVLTVGAALLFALWLNKAGA-DRAFTDYEVIFNEAVSGLSQGSAVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG ++ L LD E P A+ I TP+ T A + G+ G+ I+L + E
Sbjct: 60 SGIKVGDVISLGLDPEDPRTVRARIRIAGHTPIKQDTRARLSITGITGLAVIQLYSGSPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + S + + S +R + + + ++ T+
Sbjct: 120 SPPLEGKDGQPGIIIADRSPLS--RLMANGEDLVSNITRLLNRANRMLSRENAERVSRTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N+E + +A+ + + T L + + + +
Sbjct: 178 ENLEQATAGIASQRDELSAAL-------------QQAGAATREAAELMRTANRLLDGQGS 224
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q L+N + + +SS + + R + + ++ + + + + +
Sbjct: 225 QALDNAERLMASLERSSRSIEQLLESNRSALDSGMQGLGELGPAIGELRDTLSALRGFSR 284
Query: 301 LENIADSTSNMRSS 314
+ +RS
Sbjct: 285 RLEQDPTGYLLRSD 298
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 67/170 (39%), Gaps = 4/170 (2%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ L+++ + + N S N + + I S + +
Sbjct: 140 LSRLMANGEDLVSNITRLLNRANRMLSRENAERVSRTLENLEQATAGIASQRDELSAALQ 199
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
++++ AELM N + + + +A+R M + +S I + + S + L +
Sbjct: 200 QAGAATREAAELMRTANRLL-DGQGSQALDNAERLMASLERSSRSIEQLLESNRSALDS- 257
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
GL ++ + +L++T++ E++P + + S+K ++P
Sbjct: 258 GMQGLGELGPAIGELRDTLSALRGFSRRLEQDPTGYLLRSD--SIKEFQP 305
>gi|311694461|gb|ADP97334.1| mammalian cell entry related domain protein [marine bacterium HP15]
Length = 312
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 48/291 (16%), Positives = 103/291 (35%), Gaps = 6/291 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + ++ +GLF + + WL++S+ D I +V GLS + V +
Sbjct: 1 MEPRAHHLIIGLFTILAFAAALIFSLWLAKSSA-DREWGYYEIVFDHAVGGLSEGNPVLY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G +V + LD + P H + P+ +T A + + G ++ S +
Sbjct: 60 SGVQIGDVVEMKLDPDNPGHVRVLVRVDQSVPIRENTKAGLVLANITGSMSVQFSGGSPD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI--IENIEKPLTT 178
K + + + +I A PS +SN E K + +NI+
Sbjct: 120 KPALQG---DEDNPPVIIAEPSAFTSLLSNGEQLLAKADQLLTSATALLSADNIDNASAI 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
E +L I + + ++ + ++D L + LQ
Sbjct: 177 LENTREATDALLDRRDQLIALLEQFDAAAIRAEEAAIKVSNVSDNANELLQNDGQRVLQS 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
++Q L + + + + + + +++ L +
Sbjct: 237 MDQALAVMTTTMERIDELTRNNQGAMDAGLQGMGELAPALRELRATLRSLN 287
Score = 60.3 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 72/168 (42%), Gaps = 2/168 (1%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
F + + LL+ + S +NI ++++ + ++ A + D+R ++I+ +
Sbjct: 140 FTSLLSNGEQLLAKADQLLTSATALLSADNIDNASAILENTREATDALLDRRDQLIALLE 199
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ +++ K + + N + + + + +A+ T E+I+ +
Sbjct: 200 QFDAAAIRAEEAAIKVSNVSDNANELL-QNDGQRVLQSMDQALAVMTTTMERIDELTRNN 258
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+ + G+ ++ +R+L+ T+ + + E++P ++G E
Sbjct: 259 QGAM-DAGLQGMGELAPALRELRATLRSLNQFTHRLEQDPTGTLFGNE 305
>gi|26986885|ref|NP_742310.1| hypothetical protein PP_0140 [Pseudomonas putida KT2440]
gi|24981488|gb|AAN65774.1|AE016203_7 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|313496511|gb|ADR57877.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 312
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 53/302 (17%), Positives = 113/302 (37%), Gaps = 2/302 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GL V ++ + WL++S+ D + + +V GLS S+V++
Sbjct: 1 METRAHHVLIGLVTVLVVTGAMLFGLWLAKSS-VDDAFKDYEVVFNEAVSGLSPGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + P LA+ + DTP+ T A + G+ G ++I+LS +
Sbjct: 60 NGIKVGDVSTLRLDPKDPRRVLARVRLSADTPVKEDTQAKLTLAGVTGNSFIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + +P S+ T+ + + + +NI T
Sbjct: 120 SPELKGKDGKL-PVIIASPSPISRLLNDSSDLVTNINMLLHNANQMFSEDNIGHLSNTLA 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T + S + + QV +S + + L +
Sbjct: 179 NLDKTTGAFAGQHGSIAEAIAQLVQVGKQASATLAETQALMRNANGLLDSEGKQAIGSAE 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q ++++ S+ + D ++ +++ L+ + E
Sbjct: 239 QAMQSLAQSTATINNLLQNNSEAIGDGAQSLNQLAPAIRELRETLNALKGISRQLEADPS 298
Query: 301 LE 302
Sbjct: 299 GY 300
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 65/178 (36%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ L+++ + + + +NI ++ + + Q I I
Sbjct: 139 PISRLLNDSSDLVTNINMLLHNANQMFSEDNIGHLSNTLANLDKTTGAFAGQHGSIAEAI 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + + + + LM N + E A++AM + ++ IN + +
Sbjct: 199 AQLVQVGKQASATLAETQALMRNANGLL-DSEGKQAIGSAEQAMQSLAQSTATINNLLQN 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ + LN + +R+L+ET+N E +P + GR+ K ++P
Sbjct: 258 NSEAIGD-GAQSLNQLAPAIRELRETLNALKGISRQLEADPSGYLLGRDNN--KEFQP 312
>gi|46579024|ref|YP_009832.1| hypothetical protein DVU0610 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120603387|ref|YP_967787.1| hypothetical protein Dvul_2344 [Desulfovibrio vulgaris DP4]
gi|46448437|gb|AAS95091.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563616|gb|ABM29360.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
DP4]
gi|311232874|gb|ADP85728.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
RCH1]
Length = 306
Score = 118 bits (295), Expect = 1e-24, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 100/306 (32%), Gaps = 1/306 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG+F + + + + W + + MA + G+V GLS S V F
Sbjct: 1 METRASYILVGVFTLLAVTGALAFVLWTAGRGE-GKAMAAYDVHFSGNVMGLSVASDVFF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + L+ + P + I TP+ + A++ +GL G++ ++++
Sbjct: 60 NGVKVGAVKQITLNPDDPAKVKVRIEIDATTPVREDSVASLEGRGLTGVSVVQITGGSPH 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A E A + + + + ++ + + T
Sbjct: 120 APLLVGTAGEVPVIASRASRLEELFAGMPQLVGSGNELVNRLADVLNAENRAALASTFHA 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T + T ++ S D+ ++ + N
Sbjct: 180 LDTVTARMAARADSLDRIITNMDTTTRRLANASAGLETLAGDMRDLTRGDMRDSIVAVGN 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + + + D+R + + ++ + S +
Sbjct: 240 TARRLDALLAAAEPGVTGFSTEGLEDMRRLLIESRHLVTTLNRMAQRMESDPRRFMFGNQ 299
Query: 301 LENIAD 306
L +
Sbjct: 300 LPEYEE 305
>gi|148545415|ref|YP_001265517.1| hypothetical protein Pput_0158 [Pseudomonas putida F1]
gi|148509473|gb|ABQ76333.1| Mammalian cell entry related domain protein [Pseudomonas putida F1]
Length = 312
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/302 (17%), Positives = 113/302 (37%), Gaps = 2/302 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GL V ++ + WL++S+ D + + +V GLS S+V++
Sbjct: 1 METRAHHVLIGLVTVLVVAGAMLFGLWLAKSS-VDDAFKDYEVVFNEAVSGLSRGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + P LA+ + DTP+ T A + G+ G ++I+LS +
Sbjct: 60 NGIKVGDVSTLRLDPKDPRRVLARVRLSADTPVKEDTQAKLTLAGVTGNSFIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + +P S+ T+ + + + +NI T
Sbjct: 120 SPELKGKDGKL-PVIIASPSPISRLLNDSSDLVTNINMLLHNANQMFSEDNIGHLSNTLA 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T + S + + +V +S + + L +
Sbjct: 179 NLDKTTGAFAGQHGSIAEAIEQLVKVGNQASATLAETQALMRNANGLLGSEGKQAIGSAE 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q ++++ S+ + D ++ +++ L+ + E
Sbjct: 239 QAMQSLAQSTATINNLLQNNSEAIGDGAQSLNQLAPAIRELRETLNALKGISRQLEADPS 298
Query: 301 LE 302
Sbjct: 299 GY 300
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 66/178 (37%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ L+++ + + + +NI ++ + + Q I I
Sbjct: 139 PISRLLNDSSDLVTNINMLLHNANQMFSEDNIGHLSNTLANLDKTTGAFAGQHGSIAEAI 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + + + + + LM N + E A++AM + ++ IN + +
Sbjct: 199 EQLVKVGNQASATLAETQALMRNANGLLGS-EGKQAIGSAEQAMQSLAQSTATINNLLQN 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ + LN + +R+L+ET+N E +P + GR+ K ++P
Sbjct: 258 NSEAIGD-GAQSLNQLAPAIRELRETLNALKGISRQLEADPSGYLLGRDNN--KEFQP 312
>gi|307720550|ref|YP_003891690.1| Mammalian cell entry related domain-containing protein
[Sulfurimonas autotrophica DSM 16294]
gi|306978643|gb|ADN08678.1| Mammalian cell entry related domain protein [Sulfurimonas
autotrophica DSM 16294]
Length = 320
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 51/300 (17%), Positives = 106/300 (35%), Gaps = 10/300 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K YT +GL V+ + YW+ + + + II SV GL+ ++ V++
Sbjct: 1 MNNKVNYTFIGLIVLLGIVSMLGFTYWMLKPAK-AEETQKYIIYFNESVLGLNLNAPVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG++ L ++ I TP+ T A + QG+ G++YI L+
Sbjct: 60 RGIKVGKVTRLRINPNNSEQVEVTVQILKTTPIKEDTVAKLTAQGITGLSYINLTEGSNH 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL---- 176
+ E +I + PS + ++ S+ + + +++ + +
Sbjct: 120 APPLKIK--EGQSCPVIKSAPSFFANVEQSLDSVSELLLLTLGRTNQLLNDGNQKQFSKL 177
Query: 177 --TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + + S + ++HI K D + +
Sbjct: 178 LAKSALVMAKVDSILDEKTMAHIQKSAENLDRLTLKIDESVPNINKFVNKSIEWENKINK 237
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR-ETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + ++ + NN KS V V D +T ++ L + +
Sbjct: 238 SFTSIKETYLHMGIIMNNMAKSFLHVEENVEDATVQTLPLMNSTMLEMQQTLINLDELIN 297
Score = 43.8 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 62/151 (41%), Gaps = 5/151 (3%)
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
T+ L + + + SA+ T+ I+ NL+ + K E + I
Sbjct: 162 TNQLLNDGNQKQFSKLLAKSALVMAKVDSILDEKTMAHIQKSAENLDRLTLKIDESVPNI 221
Query: 357 NNISALK-----ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
N + N F + + + + N+++ + L + +
Sbjct: 222 NKFVNKSIEWENKINKSFTSIKETYLHMGIIMNNMAKSFLHVEENVEDATVQTLPLMNST 281
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ ++Q+T+ + D+ +N++ER+P DI++ +E+
Sbjct: 282 MLEMQQTLINLDELINHYERSPSDILFKKEQ 312
>gi|56551912|ref|YP_162751.1| mammalian cell entry related domain-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|56543486|gb|AAV89640.1| Mammalian cell entry related domain protein [Zymomonas mobilis
subsp. mobilis ZM4]
Length = 315
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 55/307 (17%), Positives = 112/307 (36%), Gaps = 12/307 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ Y VG + +L + W+ R + + I SVDGL+ SSV +
Sbjct: 1 METRSNYILVGSITLILLALIATVLVWIGRVS--GTETHQYDIFFHQSVDGLAKGSSVSY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+P G++ + L P+ + + DTP+ TTATI + G +G++ I L+
Sbjct: 59 SGVPSGQVKEIKLLPNNPDFVRVRISLNADTPVLEGTTATISSMGFSGVSQITLAGGVSG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K I + T + S + + + + R + ++ ++ + +
Sbjct: 119 AKPIENHG-PFGVPVIPTKPGALGQLLNSAPQLLERITTLTERMSDLLNDHNQRSIARIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQV---------TPHSSDSKNTFNTITDLITSLDKMI 231
N+ T+S LAN I ++M S ++ T NT+ I +
Sbjct: 178 DNMNTLSGNLANQSPKIRQIMDDAHHALVNLSDAGQQISELAQTTNNTVKQDIHPATAHL 237
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
K + + + + + T+ + ++ + L +
Sbjct: 238 KETVMAARDSMQNLNDMLLDARPGVHHFSNETMPQFDQLVHDLHDMIGSMSSLTDRLNQT 297
Query: 292 MKSKETS 298
Sbjct: 298 GAEGMLK 304
>gi|254521254|ref|ZP_05133309.1| ABC transporter substrate-binding protein [Stenotrophomonas sp.
SKA14]
gi|219718845|gb|EED37370.1| ABC transporter substrate-binding protein [Stenotrophomonas sp.
SKA14]
Length = 308
Score = 118 bits (294), Expect = 2e-24, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 1/134 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D E + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTLITGLALLAFGLWAAKYSS-DRTWQEYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L + P +A+ + TP+ T A + L G + I+LS +
Sbjct: 60 NGIAVGSITELNLVPDDPRQVVARIRLNSTTPVKTDTRAKLAITSLTGPSIIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQR 134
+ + +
Sbjct: 120 SPALTTVNKDPAPI 133
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/200 (9%), Positives = 68/200 (34%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ Q ++ + ++ + ++ + N+A + +
Sbjct: 112 QLSGGTPQSPALTTVNKDPAPIIPTTPSALQNITDVANRIVERMDQILSDRNVASINATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + + D+ Q + + + + +L+ + + + +++ +++ +
Sbjct: 172 ANLETISGGLADRDQGTQALLLSARDAARSLDTTLKTTNGTIERLDKNL-VQQLPGIIDK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + E
Sbjct: 231 LDATLGKLDSAAGNADSILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDRLEN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|260752532|ref|YP_003225425.1| hypothetical protein Za10_0289 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258551895|gb|ACV74841.1| Mammalian cell entry related domain protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 315
Score = 118 bits (293), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 112/307 (36%), Gaps = 12/307 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ Y VG + +L + W+ R + + I SVDGL+ SSV +
Sbjct: 1 METRSNYILVGSITLILLALIATILVWIGRVS--GTETHQYDIFFHQSVDGLAKGSSVSY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+P G++ + L P+ + + DTP+ TTATI + G +G++ I L+
Sbjct: 59 SGVPSGQVKEIKLLPNNPDFVRVRISLNADTPVLEGTTATISSMGFSGVSQITLAGGVSG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K I + T + S + + + + R + ++ ++ + +
Sbjct: 119 AKPIENHG-PFGVPVIPTKPGALGQLLNSAPQLLERITTLTERMSDLLNDHNQRSIARIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQV---------TPHSSDSKNTFNTITDLITSLDKMI 231
N+ T+S LAN + ++M S ++ T NT+ I +
Sbjct: 178 DNMNTLSGNLANQSPKMRQIMDDAHHALVNLSDAGQQISELAQTTNNTVKQDIHPATAHL 237
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
K + + + + + T+ + ++ + L +
Sbjct: 238 KETVMAARDSMQNLNDMLLDARPGVHHFSNETMPQFDQLVHDLHDMIGSMSSLTDRLNQT 297
Query: 292 MKSKETS 298
Sbjct: 298 GAEGMLK 304
>gi|241761772|ref|ZP_04759858.1| Mammalian cell entry related domain protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|241373686|gb|EER63246.1| Mammalian cell entry related domain protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 315
Score = 118 bits (293), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 112/307 (36%), Gaps = 12/307 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ Y VG + +L + W+ R + + I SVDGL+ SSV +
Sbjct: 1 METRSNYILVGSITLILLALIATVLVWIGRVS--GTETHQYDIFFHQSVDGLAKGSSVSY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+P G++ + L P+ + + DTP+ TTATI + G +G++ I L+
Sbjct: 59 SGVPSGQVKEIKLLPNNPDFVRVRISLNADTPVLEGTTATISSMGFSGVSQITLAGGVSG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K I + T + S + + + + R + ++ ++ + +
Sbjct: 119 AKPIENHG-PFGVPVIPTKPGALGQLLNSAPQLLERITTLTERMSDLLNDHNQRSIARIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQV---------TPHSSDSKNTFNTITDLITSLDKMI 231
N+ T+S LAN + ++M S ++ T NT+ I +
Sbjct: 178 DNMNTLSGNLANQSPKMRQIMDDAHHALVNLSDAGQQISELAQTTNNTVKQDIHPATAHL 237
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
K + + + + + T+ + ++ + L +
Sbjct: 238 KETVMAARDSMQNLNDMLLDARPGVHHFSNETMPQFDQLVHDLHDMIGSMSSLTDRLNQT 297
Query: 292 MKSKETS 298
Sbjct: 298 GAEGMLK 304
>gi|121998620|ref|YP_001003407.1| hypothetical protein Hhal_1841 [Halorhodospira halophila SL1]
gi|121590025|gb|ABM62605.1| Mammalian cell entry related domain protein [Halorhodospira
halophila SL1]
Length = 313
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/310 (17%), Positives = 101/310 (32%), Gaps = 1/310 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +GL ++++ WL+ S+ Y G I V GLS S V+F
Sbjct: 1 METRARHFWIGLATLAMILGGILFGVWLTDSDLY-GERQRFEIVFDEDVGGLSPRSPVKF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L LD + P +A+ + +TP+ T A I + L
Sbjct: 60 NGINVGEIDHLGLDPDNPGRVIARITVSGETPVRTDTRAQIGSSSLFAGGAHIRLKPGDP 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + R ++P S+ + + EN++ T
Sbjct: 120 DAPPLEPPEQGLARIETESSPMARLREDSDQLLAGINNLVETANQLLSAENLDTLTATLN 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T V A + + + + + L L
Sbjct: 180 HLEQTTGAVAARRDDLGRGITALADGGEQAERTLQEAQQLVKEVRGLLDGPGREILHSTA 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ E ++ SS + V ++ Q + + +++ L D S ++
Sbjct: 240 RATEALEGSSREAQELFRDNREAVERGLQSLQDLEPLSEELQRTLGDLRSLLRRLGQDPG 299
Query: 301 LENIADSTSN 310
+ +
Sbjct: 300 GQLLRREQME 309
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 64/178 (35%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + D LL+ ++ +++ EN+ T+ + + +R + I
Sbjct: 140 PMARLREDSDQLLAGINNLVETANQLLSAENLDTLTATLNHLEQTTGAVAARRDDLGRGI 199
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + + Q+ +L+ ++ + + RA +S +
Sbjct: 200 TALADGGEQAERTLQEAQQLVKEVRGLLDGP-GREILHSTARATEALEGSSREAQELFRD 258
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
++ L D++ L +LQ T+ L ++P + RE+ ++ Y+P
Sbjct: 259 NREAVER-GLQSLQDLEPLSEELQRTLGDLRSLLRRLGQDPGGQLLRREQ--MEEYQP 313
>gi|91975835|ref|YP_568494.1| hypothetical protein RPD_1355 [Rhodopseudomonas palustris BisB5]
gi|91682291|gb|ABE38593.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB5]
Length = 390
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 54/119 (45%), Gaps = 1/119 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG FV++ + F ++WL ++ I+ V GL ++V F
Sbjct: 1 METRAPFVIVGAFVLAAILAVFGFVFWLHNTSGIGART-SYHIQFRDPVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
NGI VG + L L + P A + DTP+ T + QGL G+ + L +
Sbjct: 60 NGIRVGEVTALGLATDDPRRVNATIAVATDTPVRLDTRVGLDFQGLTGVPVVALEGGKD 118
>gi|238751981|ref|ZP_04613466.1| hypothetical protein yrohd0001_23860 [Yersinia rohdei ATCC 43380]
gi|238709815|gb|EEQ02048.1| hypothetical protein yrohd0001_23860 [Yersinia rohdei ATCC 43380]
Length = 313
Score = 117 bits (292), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/293 (18%), Positives = 124/293 (42%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ + D I V GLS S+V++
Sbjct: 1 METRAHHVVIGLFTLIVVSAALLFCLWLTGAGT-DRQFRLYDIVFNEPVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD + P A+ + TP+ T A + G+ G + I+ S+ +
Sbjct: 60 SGIRVGEVTQLRLDTDNPTQVWARVRVSASTPIREDTQARLTVAGITGTSNIQFSSSSQA 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + + +I ATPS ++ ++N EN ++ + +++E + TT
Sbjct: 120 SPLLES---KDGEIPVIIATPSPMSQLLANGENFMSNANEVLVRLNQLLEPDNQQRLITT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ I+ +A+ I ++ + ++++ N + L +
Sbjct: 177 LNNLALITQTVADQRQDIRTLLQQLAQASKQANETLTQTNRLLRNANGLMDGQGKQLVND 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K ++ ++++ + ++ L+ +
Sbjct: 237 AAKTMASLQNTSVILNKLVNENKTSLNNGMQGMNELGPAVDELRRTLATLRAA 289
Score = 73.4 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +S+ + + +N + + + + + DQRQ I
Sbjct: 135 ATPSPMSQLLANGENFMSNANEVLVRLNQLLEPDNQQRLITTLNNLALITQTVADQRQDI 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N++ + L+ N + + L DA + M + ++TS +N+
Sbjct: 195 RTLLQQLAQASKQANETLTQTNRLLRNANGLM-DGQGKQLVNDAAKTMASLQNTSVILNK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVNENKTSLNN-GMQGMNELGPAVDELRRTLATLRAAVSRLEENPSALLRGRERT--QEF 310
Query: 449 KPK 451
P+
Sbjct: 311 TPR 313
>gi|54297973|ref|YP_124342.1| hypothetical protein lpp2028 [Legionella pneumophila str. Paris]
gi|148359619|ref|YP_001250826.1| ABC transport system periplasmic substrate binding protein
[Legionella pneumophila str. Corby]
gi|296107661|ref|YP_003619362.1| ABC transport system periplasmic substrate binding protein
[Legionella pneumophila 2300/99 Alcoy]
gi|53751758|emb|CAH13180.1| hypothetical protein lpp2028 [Legionella pneumophila str. Paris]
gi|148281392|gb|ABQ55480.1| ABC transport system periplasmic substrate binding protein
[Legionella pneumophila str. Corby]
gi|295649563|gb|ADG25410.1| ABC transport system periplasmic substrate binding protein
[Legionella pneumophila 2300/99 Alcoy]
Length = 307
Score = 117 bits (291), Expect = 4e-24, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 1/293 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MESK YT VGL V+ + + WLS + + SV GLS +S V+F
Sbjct: 1 MESKTNYTIVGLIVLILTAGLLSAGLWLS-VGFNQKEYTSYTVYLKESVSGLSVESPVKF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + L++ P I TP+ ST+AT+ +QG+ G+TY+ LS E
Sbjct: 60 NGVQVGYVKEIKLNKNDPRQVELLLNIEKSTPITTSTSATLISQGITGVTYVGLSAGSSE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ E + + + + EN + +
Sbjct: 120 LTPLRKMPGEPYPVIPSKPSLLNQLDAVLKEVAENVGAVSEKAQLIFNEENADNVRKSLA 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + + + F + + + K++
Sbjct: 180 NIERITEIIADKGQTIDSSLNNLDVFVANMAKTSKQFPQLIKDLKTGISKFKSLADNMSA 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + + + + ++ + ++
Sbjct: 240 AGKDVSKTMIAGKNTIDQISQQAIPPAVILLRRLNAISANLEKVSNEMRQNPS 292
Score = 43.8 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 66/172 (38%), Gaps = 9/172 (5%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ + + + + + + EN + ++ + I D+ Q I S++N
Sbjct: 141 LNQLDAVLKEVAENVGAVSEKAQLIFNEENADNVRKSLANIERITEIIADKGQTIDSSLN 200
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
++ +N+ +S++F +L+ + + + + +++ + +
Sbjct: 201 NLDVFVANMAKTSKQFPQLIK---------DLKTGISKFKSLADNMSAAGKDVSKTMIAG 251
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSV 445
N + SQ + L+R+L + + N +NP I+ G + +
Sbjct: 252 KNTIDQISQQAIPPAVILLRRLNAISANLEKVSNEMRQNPSVIIRGTKTPKL 303
>gi|316935756|ref|YP_004110738.1| mammalian cell entry related domain-containing protein
[Rhodopseudomonas palustris DX-1]
gi|315603470|gb|ADU46005.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris DX-1]
Length = 399
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG FV++ +F F ++WL ++ ++ V GL ++V F
Sbjct: 1 METRAPFAIVGAFVLAAIFAVFGFVFWLHNTSGVGARTT-YQLQFRDPVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
NGI VG + L L + P A + P TP+ P T + QGL G+ + L
Sbjct: 60 NGIRVGEVTALALAPDDPRRVDATIAVAPSTPVRPDTKVGLDFQGLTGVPVVALEGG 116
>gi|261855958|ref|YP_003263241.1| hypothetical protein Hneap_1360 [Halothiobacillus neapolitanus c2]
gi|261836427|gb|ACX96194.1| Mammalian cell entry related domain protein [Halothiobacillus
neapolitanus c2]
Length = 334
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 62/309 (20%), Positives = 123/309 (39%), Gaps = 4/309 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK YT+VGLFV+ ++F ++YWL + +I SV GL+ +S V +
Sbjct: 1 MDSKINYTAVGLFVLLLIFGLAGTVYWL-VTGGKQQAFTPYVIYATDSVAGLTVNSHVLY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + +D+ P I + P++ T A +R QG+ G++ + L+ +
Sbjct: 60 RGVDVGQVKSIRIDRNNPGRIRILVDIDENVPIFSDTVAQLRPQGVTGLSVLNLTGGKSS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ + + +E K S+R + E L T+
Sbjct: 120 VSLTQRN--KQGELVIPYQPSIFSRLEGGLSETMVKFSRISNRLDMLLSEKNIATLDNTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVT-PHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
NI T+STVLA + I + + T +++++ + N++ L
Sbjct: 178 QNINTLSTVLAEHKDDISAAIIAGRTTLQNTAEASQSANSLIKQSQRLIARFDKSIQGLK 237
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + + ++ S + + T Q+ +D LL+ ++
Sbjct: 238 STLTAANEAANKVSAASESTLTMSKTGNETLTNFNQQTLPVLDGLLTQLQETSRALTQLV 297
Query: 300 FLENIADST 308
N S
Sbjct: 298 NEINENPSQ 306
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/164 (19%), Positives = 61/164 (37%), Gaps = 5/164 (3%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ + FS + +NIA + +++ + + + + I + I
Sbjct: 147 LSETMVKFSRISNRLDMLLSEKNIATLDNTLQNINTLSTVLAEHKDDISAAIIAGRTTLQ 206
Query: 341 NLNDSSQKFAELMSKINNISA-----LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
N ++SQ L+ + + A ++ S A A + SE +
Sbjct: 207 NTAEASQSANSLIKQSQRLIARFDKSIQGLKSTLTAANEAANKVSAASESTLTMSKTGNE 266
Query: 396 NLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L NF+Q L + L+ +LQET +N NP I++G
Sbjct: 267 TLTNFNQQTLPVLDGLLTQLQETSRALTQLVNEINENPSQILYG 310
>gi|152992946|ref|YP_001358667.1| ABC transporter, substrate-binding protein [Sulfurovum sp. NBC37-1]
gi|151424807|dbj|BAF72310.1| ABC transporter, substrate-binding protein [Sulfurovum sp. NBC37-1]
Length = 303
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/295 (15%), Positives = 97/295 (32%), Gaps = 5/295 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ YT VG+FV+ +WL++ +++ SV GLS DS+VR
Sbjct: 1 MYSRVNYTIVGIFVLLFGAGLVAFTFWLAKYG-IKNEYNLYKLQMTESVSGLSKDSTVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + ++ + IR D P+ TA G+ G+ IE+ +
Sbjct: 60 RGVDVGRVSEIRINPDNIEQIEVFLKIRSDVPIKEDMTAHTEMLGITGLLAIEIDGGTNK 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + E + +I TPS + + ++ ++D +K++ + +I
Sbjct: 120 SKLLKS---ENGEIPVIKTTPSWFDKTSKGIGSMAENLTDLLEKAEKLLSDENIETFDSI 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + + ++ + + N
Sbjct: 177 LENTDKMTARVVDTLDEFNTTMQV-YRDAVVKLNDDIHSASSNFARITDNTLPALKALQN 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + N + + +++ L + +
Sbjct: 236 ATKNFNRFTMEAEKSLNRGDYNIKETFQPMLVDIGILTEQLTDLTRELQQSPSNV 290
>gi|52842262|ref|YP_096061.1| ABC transport system periplasmic substrate binding protein
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|52629373|gb|AAU28114.1| ABC transport system periplasmic substrate binding protein
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
Length = 307
Score = 116 bits (290), Expect = 5e-24, Method: Composition-based stats.
Identities = 48/293 (16%), Positives = 98/293 (33%), Gaps = 1/293 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MESK YT VGL V+ + + WLS + + SV GLS +S V+F
Sbjct: 1 MESKTNYTIVGLIVLILTAGLLSAGLWLS-VGFNQKEYTSYTVYLKESVSGLSVESPVKF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + L++ P I TP+ ST+AT+ TQG+ G+TY+ LS E
Sbjct: 60 NGVQVGYVKEIKLNKNDPRQVELLLNIEKSTPITTSTSATLITQGITGVTYVGLSAGSSE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ E + + + + EN + +
Sbjct: 120 LTPLRKMPGEPYPVIPSKPSLLNQLDAVLKEVAENVGAVSEKAQLIFNEENADNVRKSLA 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + +++ F + + + K++
Sbjct: 180 NLERITEIIADKGQTIDSSLNNLDVFVANMANASKQFPQLIKDLKTGISKFKSLADNMSA 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + + + + ++ + ++
Sbjct: 240 AGKDVSKTMIAGKNTIDQISQQAIPPAVILLRRLNAISANLEKVSNEMRQNPS 292
Score = 44.5 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 67/172 (38%), Gaps = 9/172 (5%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ + + + + + + EN + ++ + I D+ Q I S++N
Sbjct: 141 LNQLDAVLKEVAENVGAVSEKAQLIFNEENADNVRKSLANLERITEIIADKGQTIDSSLN 200
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
++ +N+ ++S++F +L+ + + + + +++ + +
Sbjct: 201 NLDVFVANMANASKQFPQLIK---------DLKTGISKFKSLADNMSAAGKDVSKTMIAG 251
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSV 445
N + SQ + L+R+L + + N +NP I+ G + +
Sbjct: 252 KNTIDQISQQAIPPAVILLRRLNAISANLEKVSNEMRQNPSVIIRGTKAPKL 303
>gi|260425554|ref|ZP_05779534.1| ABC transporter substrate-binding protein [Citreicella sp. SE45]
gi|260423494|gb|EEX16744.1| ABC transporter substrate-binding protein [Citreicella sp. SE45]
Length = 301
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 59/290 (20%), Positives = 116/290 (40%), Gaps = 5/290 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG+F + L WL++ Q D A+ I SV GL S+VR+
Sbjct: 1 METRARYLLVGVFTIVGLVAVMGFTLWLAKV-QIDRTYAQYDIVF-DSVAGLGQASTVRY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG+++ + LD++ P + I TP+ T AT+ +QG+ G++++ L+ R +
Sbjct: 59 NGVEVGKVLSIALDRDDPALVRVRIEIYASTPVREDTLATLSSQGVTGVSFVALAGGRAD 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I +I + PS +++A + + R I+ T I
Sbjct: 119 AEPI--GVVPPADVPLIPSEPSAFQNLLTDAPDVLAEAILLMRDIRSFTTPENGAAITAI 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T + ++ + + + ++ T + LI S D ++ +
Sbjct: 177 LRNVETATARIDAMATRTESVMASAEVTMANACA-TLVDLQALIASADGVLVDDLPAITD 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
Q+ + + N + + + I+ L S +S
Sbjct: 236 QLGAAVDRLGRSAAGFETFANNGLPQFSALATEARAMVAHINALTSRIAS 285
>gi|217978938|ref|YP_002363085.1| Mammalian cell entry related domain protein [Methylocella
silvestris BL2]
gi|217504314|gb|ACK51723.1| Mammalian cell entry related domain protein [Methylocella
silvestris BL2]
Length = 357
Score = 116 bits (290), Expect = 6e-24, Method: Composition-based stats.
Identities = 68/346 (19%), Positives = 128/346 (36%), Gaps = 7/346 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ +F + W S + G + GSV GL ++V F
Sbjct: 1 METRANYALIGGFTLAVVAAAFAFVLWFSGGEKAGGQHV-YRVVFTGSVSGLLRGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + + P A I P+ T A + T GL G+ + LS ++
Sbjct: 60 NGVRVGGVTKIDFVPDSPGKVYALIEIDARVPIRVDTKARLETTGLTGVANVALSGGSED 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
KT+ I A S I +A + + ++ K+++ +T ++
Sbjct: 120 AKTLEPGP--DGAPPTIIAERSDFQDLIESARKIAGQATEFLDRTNKVLDENSGSITASV 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
NIE S LA N + + + K + L + + +IKA+D +V
Sbjct: 178 KNIEKFSDALAANSDGLKDFL--GSMADVGRAIKPLTAQLETLADNANNVIKAVDPAQVK 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRE--TTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
I+ + S ++D+V + + ++ T + V +I
Sbjct: 236 TIVSDFAQMSGKLNSAADKVDSVLTNLNGFLATGDNKGVFDEIAAAARSIRKLADDVNAR 295
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ + TD R+ + I +I N
Sbjct: 296 WKDIGGNLARFSGSGLRQYEALATDGRKTLDLLNQAIRSIEQNPQQ 341
Score = 93.8 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 76/196 (38%), Gaps = 1/196 (0%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+++ + + + + ++ + + S +
Sbjct: 159 LDRTNKVLDENSGSITASVKNIEKFSDALAANSDGLKDFLGSMADVGRAIKPLTAQLETL 218
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + ++ + ++ ++ LN ++ K +++ +N A +N +F +
Sbjct: 219 ADNANNVIKAVDPAQVKTIVSDFAQMSGKLNSAADKVDSVLTNLNGFLATGDNKGVFDEI 278
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
A + R ++ +N IG NL FS SGL + L ++T++ + + + E+N
Sbjct: 279 AAAARSIRKLADDVNARWKDIGGNLARFSGSGLRQYEALATDGRKTLDLLNQAIRSIEQN 338
Query: 433 PQDIVWGREKGSVKIY 448
PQ ++G+ K + Y
Sbjct: 339 PQQFIFGK-KQQIPDY 353
>gi|170743043|ref|YP_001771698.1| hypothetical protein M446_4935 [Methylobacterium sp. 4-46]
gi|168197317|gb|ACA19264.1| Mammalian cell entry related domain protein [Methylobacterium sp.
4-46]
Length = 359
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 80/448 (17%), Positives = 151/448 (33%), Gaps = 92/448 (20%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ +G F ++++ F +W+ DG M + I G V GL+ S V F
Sbjct: 1 METRANNVLIGTFTLAVIAAGFLFAFWMRGPVSNDGRM-PLRIVFSGGVGGLAKGSVVTF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L + P +A + TPL T A + L G+ I L +
Sbjct: 60 NGIRVGEATEVELLPQDPRRVMALVEVERSTPLRADTRARLDMTMLTGVASIALVGGSAD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A E ++ A I A S I + +A +++ D + + +++ E + T+
Sbjct: 120 APPLK--APEGDRMATIFADSSDIQDLMQSARTIAQRADDMLQRLDRVVAGNEGAINRTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+E S L ++ +D ++ KA+D +K+
Sbjct: 178 ANVEQFSKALNDSAPALDALV------------------------------KAVDGRKLG 207
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+++N S ++ + + +HD R ++D +L + S
Sbjct: 208 SLIDNADRFSAALAAAAPDIQDGLHDARLLAAKLNASADRVDAVLKGAEGFLGS------ 261
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
++ +I +I S+ + + I
Sbjct: 262 ---------------ASGEAGKSTFGEIREAAISIREAGRAFRTMSENLDKRTATI---- 302
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ R + +QN S G + N
Sbjct: 303 ----------------------TTSFGRLSGAGRREVQNLSTEGQRTL-----------N 329
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ER+P +++G K S+ Y
Sbjct: 330 SLNSAARTIERDPSQVIFGG-KPSLPEY 356
>gi|27381174|ref|NP_772703.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
USDA 110]
gi|30179810|sp|P29285|Y6063_BRAJA RecName: Full=Uncharacterized protein bll6063
gi|27354341|dbj|BAC51328.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
USDA 110]
Length = 367
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G FV++ + F IYWL+ + GP ++ G V GL + V F
Sbjct: 1 METRAPYVLIGTFVLAAILAVFGFIYWLNNTGGI-GPRTNYHVQFQGPVPGLLVGAGVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
NGI VG + L L + P A + TP+ T + QGL G+ + L
Sbjct: 60 NGIRVGEVAQLGLAPDNPRFVNATISVASATPVRADTRVGLDFQGLTGVPVVTLEGGM 117
>gi|206575547|ref|YP_002235753.1| putative ABC transporter, periplasmic substrate-binding protein
[Klebsiella pneumoniae 342]
gi|206570391|gb|ACI12037.1| putative ABC transporter, periplasmic substrate-binding protein
[Klebsiella pneumoniae 342]
Length = 312
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 61/308 (19%), Positives = 128/308 (41%), Gaps = 11/308 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + I WLS++++ D I +V GLS S+V F
Sbjct: 1 METRAHHVLIGLFTLIIFTAVLLFSLWLSKADR-DRQFHTYDIVFSEAVSGLSQGSTVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG ++ L LD+E P A+ + TP+ T A + G+ G + I+LS +
Sbjct: 60 SGIRVGEVIQLRLDRENPGKVWARIRVEASTPVRQDTQARLAMAGITGTSIIQLSGGSET 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS-SRHIQKIIENIEKPLTTT 179
+ + ++ +I ATPS +N ++N E+ +++ R Q + ++ + T
Sbjct: 120 SPVLEGV---NDRIPVIIATPSPLNQLLTNGEDVMTNVNEVLLRLNQILTTENQQRIVKT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ N+E I+ +A+ I ++ + N L + + K
Sbjct: 177 LDNLEKITGTVADQREDISTILQQL------AVVTKQSNETLAQTNRLMRNANLLLDGKG 230
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ N + K++ + V D + + + ++ L++ + + +
Sbjct: 231 KDLVNNAANTLALLQKTTSLLNQIVIDNQHSLNNGIQGFNELGPALAELRKTLATLRGAI 290
Query: 300 FLENIADS 307
+
Sbjct: 291 NSLEANPA 298
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ + ++++ + + EN + + + DQR+ I
Sbjct: 135 ATPSPLNQLLTNGEDVMTNVNEVLLRLNQILTTENQQRIVKTLDNLEKITGTVADQREDI 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + +T N++ + LM N + + L +A + + T+ +N+
Sbjct: 195 STILQQLAVVTKQSNETLAQTNRLMRNAN-LLLDGKGKDLVNNAANTLALLQKTTSLLNQ 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ ++L N G N++ + +L++T+ +N+ E NP ++ G E+ +K +
Sbjct: 254 IVIDNQHSLNN-GIQGFNELGPALAELRKTLATLRGAINSLEANPAALLRGPER--MKEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|238759497|ref|ZP_04620660.1| hypothetical protein yaldo0001_13610 [Yersinia aldovae ATCC 35236]
gi|238702272|gb|EEP94826.1| hypothetical protein yaldo0001_13610 [Yersinia aldovae ATCC 35236]
Length = 312
Score = 116 bits (289), Expect = 7e-24, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 132/293 (45%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ + + + I +V GLS S+V++
Sbjct: 1 METRAHHVIIGLFTLIVVSAALLFCLWLTNAGS-NRQFSLYDIVFNEAVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG ++ L LD++ P+ A+ + TP+ T A + G+ G++ I+ S+ ++
Sbjct: 60 SGIRVGEVIQLRLDKDNPSKVWARVRVSASTPIRQDTQARLTVAGITGMSNIQFSSGSQD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ E ++ +I ATPS ++ ++N EN ++ + +++ + T
Sbjct: 120 SPLLEG---EDDEIPVIVATPSPMSQLLANGENFMSNANEVLVRLNQLLAPDNQQRLIKT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+E ++ +A+ + M+ + ++D+ + + L + +
Sbjct: 177 LENLELVTQTVADQREDLRTMLQQLAQASKQANDTLAQTDRLLRNANGLMEGQGKQLVSD 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K ++ ++++ + ++ L+ +
Sbjct: 237 AAKTMVSLQNTSVILNKLVNENKTSLNNGMQGMNELGPAVDELRRTLATLRAA 289
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 75/182 (41%), Gaps = 4/182 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +S+ + + +N + + + + DQR+ +
Sbjct: 135 ATPSPMSQLLANGENFMSNANEVLVRLNQLLAPDNQQRLIKTLENLELVTQTVADQREDL 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + ND+ + L+ N + + L DA + M + ++TS +N+
Sbjct: 195 RTMLQQLAQASKQANDTLAQTDRLLRNANGLM-EGQGKQLVSDAAKTMVSLQNTSVILNK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ + E NP ++ GRE+ + +
Sbjct: 254 LVNENKTSLNN-GMQGMNELGPAVDELRRTLATLRAAVTRLEENPAALLRGRERT--QEF 310
Query: 449 KP 450
P
Sbjct: 311 TP 312
>gi|190572712|ref|YP_001970557.1| hypothetical protein Smlt0660 [Stenotrophomonas maltophilia K279a]
gi|190010634|emb|CAQ44243.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 308
Score = 116 bits (289), Expect = 8e-24, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D E + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTLITGLALLAFGLWAAKYSS-DRTWQEYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I+ L L + P +A+ + TP+ T A + L G + I+LS +
Sbjct: 60 NGIAVGSIIELNLVPDDPRQVVARIRLNSTTPVKTDTRAKLAITSLTGPSIIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQR 134
+ + +
Sbjct: 120 SPALTTVNKDPAPI 133
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 18/200 (9%), Positives = 68/200 (34%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ Q ++ + ++ + ++ + N+A + +
Sbjct: 112 QLSGGTPQSPALTTVNKDPAPIIPTTPSALQNITDVANRIVERMDQILSDRNVASINATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + + D+ Q + + + + +L+ + + + +++ +++ +
Sbjct: 172 ANLETISGGLADRDQGTQALLLSARDAARSLDTTLKTTNGTIERLDRNL-VQQLPGIIDK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + E
Sbjct: 231 LDGTLAKLDSAAGNADSILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDRLEN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|254292868|ref|YP_003058891.1| hypothetical protein Hbal_0492 [Hirschia baltica ATCC 49814]
gi|254041399|gb|ACT58194.1| Mammalian cell entry related domain protein [Hirschia baltica ATCC
49814]
Length = 314
Score = 116 bits (288), Expect = 8e-24, Method: Composition-based stats.
Identities = 50/300 (16%), Positives = 120/300 (40%), Gaps = 12/300 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G FV+ + W+S+ Q+ + + G+V+GLS VRF
Sbjct: 1 METRANYGLIGAFVLMAMVAFVLFAVWISKV-QFSKEFSVFDVVFEGAVNGLSEGGEVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + PN+ +A+ + +TP+ + A + G+ G+T+I++ +
Sbjct: 60 NGIKVGEVTDLGLDAQDPNNVIARIRVDANTPVKSDSRAELGLLGITGMTFIQIKAGSPD 119
Query: 121 KKTIF-----QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + + + SG I ++ + ++S R +
Sbjct: 120 EPLLNKGIRPYPPRIKTDKTQLDKIFSGGEGLIESSTDALDRVSRMFRDENVTRISNILA 179
Query: 176 L-TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + A+ I + ++ + + + D +L +
Sbjct: 180 NIEDLTDVANGQNGIAADAQRAIQALEGAGIAMNDAAVAVDAASVQFDANVALMTKDTML 239
Query: 235 DLQKVNQILENIQVSSNN-----FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
L+ + ++++ + + + + + ++ T Q Q + Q++D ++++
Sbjct: 240 LLKDMQNVVKSADHAVGSVEGVVMDELAPSAEEVMSELSTTLQDVQLLVQRLDGVVAELE 299
>gi|86748500|ref|YP_484996.1| hypothetical protein RPB_1375 [Rhodopseudomonas palustris HaA2]
gi|86571528|gb|ABD06085.1| Mammalian cell entry related [Rhodopseudomonas palustris HaA2]
Length = 390
Score = 116 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 1/119 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG FV++ + F ++WL ++ I+ V GL ++V F
Sbjct: 1 METRAPFVVVGAFVLAAILAVFGFVFWLHNTSGIGART-SYHIQFRDPVPGLLVGAAVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
NGI VG + L L + P A + +TP+ P T + QGL G+ + L +
Sbjct: 60 NGIRVGEVTELGLASDDPRRVNATIAVATNTPVRPDTKVGLDFQGLTGVPVVALEGGKD 118
>gi|229587673|ref|YP_002869792.1| hypothetical protein PFLU0096 [Pseudomonas fluorescens SBW25]
gi|229359539|emb|CAY46380.1| conserved hypothetical membrane protein [Pseudomonas fluorescens
SBW25]
Length = 312
Score = 116 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 59/294 (20%), Positives = 121/294 (41%), Gaps = 7/294 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S+ D + + +V GLS SSV++
Sbjct: 1 METRAHHVMIGLFSVIVVVGAMLFGLWLAKSS-VDSAFQDYEVIFNEAVSGLSQGSSVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG ++ L LD + P LA+ + +TP+ T A + G+ G + I+LS +
Sbjct: 60 SGIKVGDVISLRLDPKDPRRVLARIRLAGETPIKEDTQAKLALTGITGTSIIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + I A+PS I ++N+ + I+ + + + T
Sbjct: 120 SPELKG---KDGNLPEIIASPSPIARLLNNSNDLMTSINLLLHNANDLFSRENVERLSNT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ N++ + V+A+ I +M S + T L+ + + ++ Q
Sbjct: 177 LDNLQKTTGVIADQRGDIKVVMQQL--MQVSKQASAALEQTTVLMRNANGLLNEQGKQAF 234
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ ++ ++ + + N V Q E+ + L S
Sbjct: 235 GSAEQAMKSLEHSTATINTLLTNNKDSVNSGMQGLNELAPAVRELRETLGSLRA 288
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 74/178 (41%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + L++ + + + EN+ ++ + + I DQR I +
Sbjct: 139 PIARLLNNSNDLMTSINLLLHNANDLFSRENVERLSNTLDNLQKTTGVIADQRGDIKVVM 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ ++ + + ++ LM N + ++ F A++AM + ++ IN + +
Sbjct: 199 QQLMQVSKQASAALEQTTVLMRNANGLLN-EQGKQAFGSAEQAMKSLEHSTATINTLLTN 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+++ + GLN++ VR+L+ET+ E NP + G +K K + P
Sbjct: 258 NKDSVNS-GMQGLNELAPAVRELRETLGSLRAISRRLEANPSGYLLGSDKN--KEFTP 312
>gi|194364300|ref|YP_002026910.1| Mammalian cell entry related domain-containing protein
[Stenotrophomonas maltophilia R551-3]
gi|194347104|gb|ACF50227.1| Mammalian cell entry related domain protein [Stenotrophomonas
maltophilia R551-3]
Length = 308
Score = 116 bits (288), Expect = 9e-24, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 57/134 (42%), Gaps = 1/134 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D E + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTLITGLALLAFGLWAAKYSS-DRTWQEYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I+ L L + P +A+ + TP+ T A + L G + I+LS +
Sbjct: 60 NGIAVGSIIELNLVPDDPRQVVARIRLNSTTPVKTDTRAKLAITSLTGPSIIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQR 134
+ + +
Sbjct: 120 SPALTTVNKDPAPI 133
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 17/200 (8%), Positives = 68/200 (34%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ Q ++ + ++ + ++ + N+A + +
Sbjct: 112 QLSGGTPQSPALTTVNKDPAPIIPTTPSALQNITDVANRIVERMDQILSDRNVASINATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + + D+ Q + + + + +L+ + + + +++ +++ +
Sbjct: 172 ANLETISGGLADRDQGTQALLLSARDAARSLDTTLKTTNGTIERLDKNL-VQQLPGIIDK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + E
Sbjct: 231 LDGTLVKLDSAAGNADSILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDRLEN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++P+
Sbjct: 291 NPARYLLGRDAP--KEFEPQ 308
>gi|103485972|ref|YP_615533.1| hypothetical protein Sala_0479 [Sphingopyxis alaskensis RB2256]
gi|98976049|gb|ABF52200.1| Mammalian cell entry related [Sphingopyxis alaskensis RB2256]
Length = 313
Score = 116 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/300 (15%), Positives = 103/300 (34%), Gaps = 5/300 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ VG FV+ F + WL+ + G E I SVDGL+ + V+F
Sbjct: 1 METRSNNILVGAFVLLFTAALAFFVVWLANDS--GGAKREYDIFFKQSVDGLNKGAQVQF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+P G++ + L + P + + P+ TTA + G G++ +
Sbjct: 59 SGVPSGQVREIALWPDDPQFVRVRIEVNEGVPVLQGTTAALEGVGFTGVS-QISLDGAVK 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T + + + + + R + + + + +
Sbjct: 118 GAPPITDKGPAGKPVIPTRVGGLGEILNTAPQLLQRLSTLTERLAELADDENQASIRGIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSS--DSKNTFNTITDLITSLDKMIKAIDLQK 238
N+E + +LA N I++ + T++ + ++ N ++D+ +
Sbjct: 178 NNVEASTAILARNGPAIERALADTRIAIQQTGIAAEQIGNLAAAAQGTIDRNVDPAMANL 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + +D T + + + + SS +
Sbjct: 238 RDTLKSANASMKTLEGAIADARPGLKTFSETTIPEANALIRDLRRTSASLSSLTDKLDQQ 297
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 57/179 (31%), Gaps = 3/179 (1%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
E+ LL S+ + A EN A + + ++ + I
Sbjct: 137 VGGLGEILNTAPQLLQRLSTLTERLAELADDENQASIRGILNNVEASTAILARNGPAIER 196
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ ++++ L + + + + + + + + + + I
Sbjct: 197 ALADTRIAIQQTGIAAEQIGNLAAAAQGTI-DRNVDPAMANLRDTLKSANASMKTLEGAI 255
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
L+ FS++ + + L+R L+ T + ++ V G K + YK
Sbjct: 256 ADARPGLKTFSETTIPEANALIRDLRRTSASLSSLTDKLDQQGAGAVLGGSK--LPDYK 312
>gi|238796786|ref|ZP_04640291.1| hypothetical protein ymoll0001_25880 [Yersinia mollaretii ATCC
43969]
gi|238719274|gb|EEQ11085.1| hypothetical protein ymoll0001_25880 [Yersinia mollaretii ATCC
43969]
Length = 313
Score = 116 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 54/293 (18%), Positives = 123/293 (41%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ + + I V GLS S+V++
Sbjct: 1 METRAHHVVIGLFTLIVVSAALLFCLWLTNAGS-NRQFKLYDIVFNEPVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG ++ L LD E PN A+ + TP+ T A + G+ G + I+ S+ +
Sbjct: 60 SGIRVGEVIQLRLDNEDPNKVWARIRVSASTPIRQDTQARLTVAGITGTSNIQFSSSSQS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + + +I ATPS ++ ++N EN ++ + +++E + T
Sbjct: 120 SPLLEG---KDGEIPIIIATPSPMSQLLANGENFMSNANEVLVRLNQLLEPDNQQRLIRT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ I+ +A+ I M+ + ++++ N + L +
Sbjct: 177 LDNLALITQTVADQRGDISTMLQQLAQASKQANETLAQTNRLLRNANGLMDGQGKQLVSD 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K + ++ + + ++ L+ +
Sbjct: 237 AAKTMASLQNTSTILNKLVSENKTSLSNGMQGMNELGPAVDELRRTLATLRAA 289
Score = 76.5 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 76/183 (41%), Gaps = 4/183 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +S+ + + +N + + + + DQR I
Sbjct: 135 ATPSPMSQLLANGENFMSNANEVLVRLNQLLEPDNQQRLIRTLDNLALITQTVADQRGDI 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N++ + L+ N + + L DA + M + ++TS +N+
Sbjct: 195 STMLQQLAQASKQANETLAQTNRLLRNANGLM-DGQGKQLVSDAAKTMASLQNTSTILNK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVSENKTSLSN-GMQGMNELGPAVDELRRTLATLRAAVSRLEENPSALLRGRERT--QEF 310
Query: 449 KPK 451
P+
Sbjct: 311 TPR 313
>gi|157415868|ref|YP_001483124.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 81116]
gi|157386832|gb|ABV53147.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 81116]
gi|307748505|gb|ADN91775.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni M1]
gi|315931383|gb|EFV10352.1| mce related family protein [Campylobacter jejuni subsp. jejuni 327]
Length = 296
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 102/288 (35%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSK-EESFKYYEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +I+L K
Sbjct: 60 LGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFIQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + +I S + +E+ + + ++++ +
Sbjct: 120 SKDLVS---IHGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEIL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + AN ++ + +++ + +
Sbjct: 177 L--QNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQNFNSSLKNIKESTMILK 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + ++ + + + + + + +D
Sbjct: 235 NFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQNSPADL 282
>gi|148925787|ref|ZP_01809475.1| possible ABC transport system periplasmic substrate-binding protein
[Campylobacter jejuni subsp. jejuni CG8486]
gi|145845797|gb|EDK22888.1| possible ABC transport system periplasmic substrate-binding protein
[Campylobacter jejuni subsp. jejuni CG8486]
Length = 296
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 102/288 (35%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSK-EESFKYYEIHTQESVAGLGVKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEVGSVEEIGIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFVQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + +I S + +E+ + + ++++ +
Sbjct: 120 SKDLVS---IHGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEIL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + AN ++ + +++ + +
Sbjct: 177 L--QNLAELSANLNTNSKNLSLNLSNASLKIGKMADNISLSAQNFNSSLKDIKESTMILK 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + +I + + + + + + +D
Sbjct: 235 NFIKKADEKLNTYDDIKASLIQNLELFKRVLIESNILIENLQNSPADL 282
>gi|313683001|ref|YP_004060739.1| mammalian cell entry related domain protein [Sulfuricurvum kujiense
DSM 16994]
gi|313155861|gb|ADR34539.1| Mammalian cell entry related domain protein [Sulfuricurvum kujiense
DSM 16994]
Length = 322
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/305 (16%), Positives = 117/305 (38%), Gaps = 13/305 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MES+ YT++G+FV+ +WL + +Q + + + SV GLS +++V+F
Sbjct: 1 MESRVNYTAIGVFVILFTVAVVAFGFWLGKYSQDERLYRRYKVYMTESVSGLSPEAAVKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + ++ I+ +TP+ + A ++ G+ G+ +IE++ +
Sbjct: 61 QGVDVGKVESIQINPHNSEEVELTLKIKKETPIKTDSNAMLKFYGITGLAFIEIAGGSRH 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ I ++PS I + N + K+S + KI +
Sbjct: 121 APLLSDG---KDTVLTIPSSPSLITRLDESLSNVAAKLSLTLDRANKIFSDKNIDNVAQS 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT------ITDLITSLDKMIKAI 234
T + K + + + SK+ + + + +I+
Sbjct: 178 LENLRSLTAQIDGYQIQIKSLLAQSIALEHNASKSFVAMGEAAGSVKTASGNFNTLIQTK 237
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT----FQEVGQKIDHLLSDFSS 290
+ + + S K + + +D+R + ++ L ++ +
Sbjct: 238 MASTLESLDATSKESHKLIQKLEASLDHGDYDMRAIAAPASGELTTLLEQTRTLSNEMET 297
Query: 291 KMKSK 295
++S
Sbjct: 298 TLRSL 302
Score = 46.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 20/246 (8%), Positives = 72/246 (29%), Gaps = 8/246 (3%)
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
N + +++ T ++ + ++ + + I+ + +L + + +
Sbjct: 74 NPHNSEEVELTLKIKKETPIKTDSNAMLKFYGITGLAFIEIAGGSRHAPLLSDGKDTVLT 133
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
S + + + + + SD + ++ A
Sbjct: 134 IPSSPSLITRLDESLSNVAAKLSLTLDRANKIFSDKNIDNVAQSLENLRSLTAQIDGYQI 193
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
S + + + + ++ +S F L+ + S +
Sbjct: 194 QIKSLLAQSIALEHNASKSFVAMGEAAGSVKTASGNFNTLIQT--------KMASTLESL 245
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
+K+ + +++ + ++ L+ + + N + L + N
Sbjct: 246 DATSKESHKLIQKLEASLDHGDYDMRAIAAPASGELTTLLEQTRTLSNEMETTLRSLREN 305
Query: 433 PQDIVW 438
P D+++
Sbjct: 306 PSDLLF 311
>gi|205355660|ref|ZP_03222430.1| possible ABC transport system periplasmic substrate binding protein
[Campylobacter jejuni subsp. jejuni CG8421]
gi|205346437|gb|EDZ33070.1| possible ABC transport system periplasmic substrate binding protein
[Campylobacter jejuni subsp. jejuni CG8421]
Length = 296
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 102/288 (35%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSK-EESFKYYEIHTQESVAGLGVKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEVGSVEEIGIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFVQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + +I S + +E+ + + ++++ +
Sbjct: 120 SKDLVS---IHGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEIL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + AN ++ + +++ + +
Sbjct: 177 L--QNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQNFNSSLKDIKESTMILK 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + +I + + + + + + +D
Sbjct: 235 NFIKKADEKLNTYDDIKASLIQNLELFKRVLIESNILIENLQNSPADL 282
>gi|57238659|ref|YP_179790.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni RM1221]
gi|86153127|ref|ZP_01071332.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|57167463|gb|AAW36242.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni RM1221]
gi|85844012|gb|EAQ61222.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni HB93-13]
gi|315059098|gb|ADT73427.1| Possible ABC transport system periplasmic substrate-binding protein
[Campylobacter jejuni subsp. jejuni S3]
Length = 296
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 41/288 (14%), Positives = 103/288 (35%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSK-EESFKYYEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFVQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + +I S + +E+ + + ++++ +
Sbjct: 120 SKDLVS---IQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEIL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + AN ++ + +++ + +
Sbjct: 177 L--QNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQNFNSSLKDIKESTMILK 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + ++ + + + + + + +D
Sbjct: 235 NFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQNSPADL 282
>gi|153951405|ref|YP_001398925.1| ABC transporter periplasmic substrate-binding protein
[Campylobacter jejuni subsp. doylei 269.97]
gi|152938851|gb|ABS43592.1| putative ABC transporter, periplasmic substrate-binding protein
[Campylobacter jejuni subsp. doylei 269.97]
Length = 296
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 43/288 (14%), Positives = 102/288 (35%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I+WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFIFWLGGYSK-EESFKYYEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFVQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + I + + + I+ ++ + + EK L
Sbjct: 120 SKDLVSIHGKLPVIPFKESFLATIDR-----QSEHIFSLVKTADDKSKELLSEKNLKNLE 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ ++ + AN + + +++ + +
Sbjct: 175 IFLQNLAELSANLNADSKNLSLNLSNASLKIGKMADNISLSAQNFNSSLKDIKESTMILK 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + ++ + ++ + + + + +D
Sbjct: 235 NFIKKADEKLNTYDDIKASLMQNLELFKQVLIESNILIENLQNSPADL 282
>gi|307610776|emb|CBX00388.1| hypothetical protein LPW_21091 [Legionella pneumophila 130b]
Length = 307
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 1/293 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MESK YT VGL V+ + + WLS + + SV GLS +S V+F
Sbjct: 1 MESKTNYTIVGLAVLILTAGLLSAGLWLS-VGFNQKEYTSYTVYLKESVSGLSIESPVKF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + L++ P I TP+ ST+AT+ +QG+ G+TY+ LS E
Sbjct: 60 NGVQVGYVKEIKLNKNDPRQVELLLNIEKSTPITTSTSATLISQGITGVTYVGLSAGSSE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ E + + + + EN + +
Sbjct: 120 LTPLRKMPGEPYPVIPSKPSLLNQLDAVLKEVAENVGAVSEKAQLIFNEENADNVRKSLA 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + + + F + + + K++
Sbjct: 180 NIERITEIIADKGQTIDSSLNNLDVFVANMAKASKQFPQLIKDLKTGISKFKSLADNMSA 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + + + + ++ + ++
Sbjct: 240 AGKDVSKTMIAGKNTIDQISQQAIPPAVILLRRLNAISANLEKVSNEMRQNPS 292
Score = 44.5 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 66/172 (38%), Gaps = 9/172 (5%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ + + + + + + EN + ++ + I D+ Q I S++N
Sbjct: 141 LNQLDAVLKEVAENVGAVSEKAQLIFNEENADNVRKSLANIERITEIIADKGQTIDSSLN 200
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
++ +N+ +S++F +L+ + + + + +++ + +
Sbjct: 201 NLDVFVANMAKASKQFPQLIK---------DLKTGISKFKSLADNMSAAGKDVSKTMIAG 251
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSV 445
N + SQ + L+R+L + + N +NP I+ G + +
Sbjct: 252 KNTIDQISQQAIPPAVILLRRLNAISANLEKVSNEMRQNPSVIIRGTKAPKL 303
>gi|121612777|ref|YP_001001291.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 81-176]
gi|167006185|ref|ZP_02271943.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 81-176]
gi|87249981|gb|EAQ72940.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 81-176]
Length = 296
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 45/288 (15%), Positives = 106/288 (36%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSK-EESFKYYEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFVQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + +I S + +E+ + + ++++ +
Sbjct: 120 SKDLVS---IQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEIL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ N S + + + N + + +SL + ++ + K
Sbjct: 177 LQNLAELSANLNANSKNLSLNLSNASLKIGKMANNISLSAQNFNSSLKDIKESTMILKKF 236
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + ++ + + + + + + +D
Sbjct: 237 --IKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQNSPADL 282
>gi|83858856|ref|ZP_00952378.1| ABC transporter, periplasmic substrate-binding protein, putative
[Oceanicaulis alexandrii HTCC2633]
gi|83853679|gb|EAP91531.1| ABC transporter, periplasmic substrate-binding protein, putative
[Oceanicaulis alexandrii HTCC2633]
Length = 318
Score = 115 bits (287), Expect = 1e-23, Method: Composition-based stats.
Identities = 59/322 (18%), Positives = 110/322 (34%), Gaps = 4/322 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K ++ VG FVV + WLS ++ D E + G+V GL S VRF
Sbjct: 1 METKAHHAIVGFFVVFLTVSGVMLTLWLSGAS-LDKEFREYDVVFDGAVRGLRPASEVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L+ + P +A+ + +TP+ + A + QGL G++YI++S +
Sbjct: 60 NGIQVGEVTELGLNPDNPGQVIARIRVNVETPVKSDSEAQLEPQGLTGLSYIQISAGSPD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ +R R T + S ++S EN+E T
Sbjct: 120 AARLESRQGDRAPRIYATQAQIDQLVEGGESLLESAQLSFVRVSRLLSDENLESLTNTLN 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + D + + ++ +
Sbjct: 180 HIETITGNLAERELLMSEARAALHSIRQAGDDVSVAASAMQQFAEVTERYVVNDLTPATL 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q ++ D + V E ++ + ++ L D S + + E A
Sbjct: 240 DTAAAAQEVDRTAQETYDALTAIRPGVEEFSE---DGLTQLTATLRDLRSLVAALERVAL 296
Query: 301 LENIADSTSNMRSSISAIREIT 322
+ + +
Sbjct: 297 ELEADPAGFIAEPEGAEVEVPR 318
>gi|283957034|ref|ZP_06374506.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 1336]
gi|283791535|gb|EFC30332.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 1336]
Length = 296
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 104/288 (36%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSK-EESFKYYEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFVQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + +I S + +E+ + + ++++
Sbjct: 120 SKDLVS---IQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEI- 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ ++ + AN ++ + T +++ + +
Sbjct: 176 -FLQNLAELSANLNANSKNLSLNLSNTSLKIGKMADNISLSAQNFNSSLKDIKESTMILK 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + ++ + + + + + + +D
Sbjct: 235 NFIKKADEKLNTYDDIKASLMQNLELFKRILIESNILIENLQNSPADL 282
>gi|54294944|ref|YP_127359.1| hypothetical protein lpl2023 [Legionella pneumophila str. Lens]
gi|53754776|emb|CAH16263.1| hypothetical protein lpl2023 [Legionella pneumophila str. Lens]
Length = 307
Score = 115 bits (286), Expect = 1e-23, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 97/293 (33%), Gaps = 1/293 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MESK YT VGL V+ + + WLS + + SV GLS +S V+F
Sbjct: 1 MESKTNYTIVGLAVLILTAGLLSAGLWLS-VGFNQKEYTSYTVYLKESVSGLSIESPVKF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + L++ P I TP+ ST+AT+ +QG+ G+TY+ LS E
Sbjct: 60 NGVQVGYVKEIKLNKNDPRQVELLLNIEKSTPITTSTSATLISQGITGVTYVGLSAGSSE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ E + + + + EN + +
Sbjct: 120 LTPLRKMPGEPYPVIPSKPSLLNQLDAVLKEVAENVGAVSEKAQLIFNEENADNVRKSLA 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + + + F + + + K++
Sbjct: 180 NIERITEIIADKGQTIDSSLNNLDVFVANMAKASKQFPQLIKDLKTGISKFKSLADNMSA 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + + + + ++ + ++
Sbjct: 240 AGKDVSKTMIAGKNTIDQISQQAIPPAVILLRRLNAISANLEKISNEMRQNPS 292
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 66/172 (38%), Gaps = 9/172 (5%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ + + + + + + EN + ++ + I D+ Q I S++N
Sbjct: 141 LNQLDAVLKEVAENVGAVSEKAQLIFNEENADNVRKSLANIERITEIIADKGQTIDSSLN 200
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
++ +N+ +S++F +L+ + + + + +++ + +
Sbjct: 201 NLDVFVANMAKASKQFPQLIK---------DLKTGISKFKSLADNMSAAGKDVSKTMIAG 251
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSV 445
N + SQ + L+R+L + + N +NP I+ G + +
Sbjct: 252 KNTIDQISQQAIPPAVILLRRLNAISANLEKISNEMRQNPSVIIRGTKAPKL 303
>gi|300114237|ref|YP_003760812.1| mammalian cell entry related domain-containing protein
[Nitrosococcus watsonii C-113]
gi|299540174|gb|ADJ28491.1| Mammalian cell entry related domain protein [Nitrosococcus watsonii
C-113]
Length = 295
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/288 (18%), Positives = 109/288 (37%), Gaps = 7/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + ++ +GLF + L WL +S+ + IR +V GL+ ++V +
Sbjct: 1 MEPRAHHVLIGLFALLTLGGILLFSLWLGKSSA-ERDYDYYEIRFDQAVSGLAVGNAVLY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG ++ L+LD E P+ A + D P+ T A++ + G I+L +
Sbjct: 60 NGIKVGDVMDLYLDPEDPSQVRALIRVYSDVPVKQDTRASLMLANITGGMSIQLHGGTLQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK-IIENIEKPLTTT 179
+ + NQ A+I A PS + F++ E + + + +
Sbjct: 120 SPRLIS---DPNQPAVIVAEPSPLRSFLAGGETLMVSLDRLLNSTNRLLSPENLGRIERI 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +IE I+T LA + + M ++ ++ M
Sbjct: 177 LVDIEQITTTLAAQRDELAQAMTNFNRAGQQANVLLEQQGSKAFNSAQHAMAALERSSSQ 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ L + + + Q+ + ++ ++++ S+
Sbjct: 237 IESLLAANAA--SVNRGLGQLGPALSELNSVLNNLNRFTRRLEENPSE 282
>gi|86152242|ref|ZP_01070453.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 260.94]
gi|85840731|gb|EAQ57982.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 260.94]
Length = 296
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/288 (15%), Positives = 106/288 (36%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSK-EESFKYYEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGIIGLKFVQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + +I S + +E+ + + ++++ +
Sbjct: 120 SKDLVS---IQGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEIL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ N S + + + N + + ++L + ++ + K
Sbjct: 177 LQNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQNFNSNLKDIKESTMILKKF 236
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + ++ + + + + + + +D
Sbjct: 237 --IKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQNSPADL 282
>gi|312958196|ref|ZP_07772719.1| ABC transport system substrate-binding protein [Pseudomonas
fluorescens WH6]
gi|311287627|gb|EFQ66185.1| ABC transport system substrate-binding protein [Pseudomonas
fluorescens WH6]
Length = 312
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/294 (18%), Positives = 120/294 (40%), Gaps = 7/294 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL++S+ D + + +V GLS SSV++
Sbjct: 1 METRAHHVMIGLFSVIVVVGAMLFGLWLAKSS-VDSAFQDYEVIFNEAVSGLSQGSSVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG ++ L LD + P LA+ + TP+ T A + G+ G + I+LS +
Sbjct: 60 SGIKVGDVISLSLDPKDPRRVLARIRLAGQTPVKEDTQAKLALTGITGTSIIQLSGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ-KIIENIEKPLTTT 179
+ + I A+PS I ++++ + I+ + ++ T
Sbjct: 120 SPALKG---KDGNLPQIIASPSPIARLLNDSNDLMTGINLLLHNANAMFSSENVDRISKT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ N++ + +A+ I +M + + T+ L+ + + ++ Q
Sbjct: 177 LDNLQQTTGAIADQRGDIKVVMQQLMQVSKQASAALEQTTL--LMRNANGLLNDQGKQAF 234
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ ++ ++ + + + V Q E+ + L S
Sbjct: 235 GSAEQAMKSLEHSTATLNTLLTDNKDSVNSGLQGLNELAPAVRELRETLGSLRA 288
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 71/178 (39%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + L++ + + + EN+ + + + I DQR I +
Sbjct: 139 PIARLLNDSNDLMTGINLLLHNANAMFSSENVDRISKTLDNLQQTTGAIADQRGDIKVVM 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ ++ + + ++ LM N + + F A++AM + ++ +N +
Sbjct: 199 QQLMQVSKQASAALEQTTLLMRNANGLLN-DQGKQAFGSAEQAMKSLEHSTATLNTLLTD 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+++ + GLN++ VR+L+ET+ E NP + G +K K + P
Sbjct: 258 NKDSVNS-GLQGLNELAPAVRELRETLGSLRAISRRLEANPSGYLLGSDKN--KEFTP 312
>gi|283953734|ref|ZP_06371265.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 414]
gi|283794775|gb|EFC33513.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 414]
Length = 296
Score = 115 bits (286), Expect = 2e-23, Method: Composition-based stats.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 1/124 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSKKESFKY-YEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFVQLQGGSKN 119
Query: 121 KKTI 124
K +
Sbjct: 120 SKDL 123
>gi|220924821|ref|YP_002500123.1| Mammalian cell entry related domain-containing protein
[Methylobacterium nodulans ORS 2060]
gi|219949428|gb|ACL59820.1| Mammalian cell entry related domain protein [Methylobacterium
nodulans ORS 2060]
Length = 359
Score = 115 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 78/448 (17%), Positives = 150/448 (33%), Gaps = 92/448 (20%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ +G F ++++ F YW+ + + + I G V GL+ S V F
Sbjct: 1 METRANNVLIGTFTLAVIAAGFLFAYWMRG-SVSNEGRMPLRIVFSGGVGGLAKGSIVTF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L + P A + TPL T A + L G+ I L +
Sbjct: 60 NGIRVGEATDVQLLPQDPRRVTALVEVERTTPLRADTRARLDMTMLTGVASIALVGGSAD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A E + A I A S I + +A +++ D + + +++ E + T+
Sbjct: 120 APPLK--APEGERMATIFADSSEIQDLMQSARTIAQRADDMLQRLDRVVAGNEGAINRTL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+E S L ++ +D ++ KA+D +K+
Sbjct: 178 ANVEQFSKTLNDSAPALDALV------------------------------KAVDGRKLG 207
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+++N S ++ + +HD R+ ++D +L + S
Sbjct: 208 SLIDNADRFSAALAAAAPDIAAGLHDARQLAAKLNASADRVDAVLKGAEGFLGS------ 261
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
++ E +I +I S+ + + I
Sbjct: 262 ---------------ASGEEGRSTFGEIREAAISIREAGRAFRTMSENLDKRTATI---- 302
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ R + +QN S G + N
Sbjct: 303 ----------------------TTSFGRLSGAGRREVQNLSTEGQRTL-----------N 329
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ + ER+P +++G K ++ Y
Sbjct: 330 SLNSAARSLERDPSQVIFGG-KPTLPEY 356
>gi|220903811|ref|YP_002479123.1| Mammalian cell entry related domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868110|gb|ACL48445.1| Mammalian cell entry related domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 150
Score = 115 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 57/134 (42%), Gaps = 3/134 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T+VGLFV+ L + L + E+ SV GL + V
Sbjct: 1 MST-VRETAVGLFVLIGLLCVAYLTIKLGKMEVLSNKGYELTANF-DSVSGLRVGADVEM 58
Query: 61 NGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G+PVG+++ + LD + N ++ + + D L + A+I T GL G Y+ +S
Sbjct: 59 SGVPVGKVISISLDPDPMRNQAVVRLRLDKDLHLSDDSIASILTSGLIGDKYVSISRGGS 118
Query: 120 EKKTIFQIATERNQ 133
+ + +
Sbjct: 119 DHMLAPGDSITETE 132
>gi|86149271|ref|ZP_01067502.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596269|ref|ZP_01099506.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 84-25]
gi|218563237|ref|YP_002345017.1| putative ABC transporter periplasmic substrate-binding protein
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|85840053|gb|EAQ57311.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191110|gb|EAQ95082.1| ABC transporter, periplasmic substrate-binding protein, putative
[Campylobacter jejuni subsp. jejuni 84-25]
gi|112360944|emb|CAL35745.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter jejuni subsp. jejuni NCTC 11168]
gi|284926842|gb|ADC29194.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter jejuni subsp. jejuni IA3902]
gi|315927601|gb|EFV06932.1| mce related family protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929478|gb|EFV08674.1| mce related family protein [Campylobacter jejuni subsp. jejuni 305]
Length = 296
Score = 115 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 104/288 (36%), Gaps = 6/288 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV + F S I WL ++ + I SV GL + VR
Sbjct: 1 MENRANYFFVGLFVFGVFFASLGFILWLGGYSK-EESFKYYEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + + ++ +TP+ T AT++ QG+ G+ +I+L K
Sbjct: 60 LGVEVGSVEEISIYNQDELGVNIRIKVKNNTPIKEDTFATLQLQGITGLKFIQLQGGSKN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + + +I S + +E+ + + ++++ +
Sbjct: 120 SKDLVSM---QGKLPVIPFKESFLATIDRQSEHIFSLVKTADDKSKELLSEKNLKNLEIL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + AN ++ + +++ + +
Sbjct: 177 L--QNLAELSANLNANSKNLSLNLSNASLKIGKMADNISLSAQNFNSSLKNIKESTMILK 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ N + ++ + + + + + + +D
Sbjct: 235 NFIKKADEKLNTYDDIKASLMQNLELFKRVLIESNILIENLQNSPADL 282
>gi|148263114|ref|YP_001229820.1| hypothetical protein Gura_1041 [Geobacter uraniireducens Rf4]
gi|146396614|gb|ABQ25247.1| Mammalian cell entry related domain protein [Geobacter
uraniireducens Rf4]
Length = 150
Score = 115 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 1/133 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T VG+FV+ + + L + + G V SV GL + +SV
Sbjct: 1 MKKAGLETIVGIFVLIGILCLAYLSIKLGKMELFGGDYYTVTANF-DSVSGLKSGASVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + + + IR ++ A +RT+G+ G +I+L+ +
Sbjct: 60 AGVEVGRVERIILDPKGNDRAKVYLRIRSGVKMFDDVIAAVRTRGIIGDKFIQLNPGGSD 119
Query: 121 KKTIFQIATERNQ 133
K +
Sbjct: 120 KIIANGGRIRETE 132
>gi|268678742|ref|YP_003303173.1| hypothetical protein Sdel_0100 [Sulfurospirillum deleyianum DSM
6946]
gi|268616773|gb|ACZ11138.1| Mammalian cell entry related domain protein [Sulfurospirillum
deleyianum DSM 6946]
Length = 316
Score = 115 bits (285), Expect = 2e-23, Method: Composition-based stats.
Identities = 47/293 (16%), Positives = 96/293 (32%), Gaps = 2/293 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG FV +L S SI WL R + + SV GL+ + V+
Sbjct: 1 MENRLSYILVGAFVFVLLIGSVVSIVWLGRYSDEGSFKF-YQVATKESVSGLNEKAPVKL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G + + ++ + L ++ D P+ ST A I QG+ G++YI+L
Sbjct: 60 HGVQIGEVRDININPKNAEEVLVTIRVQEDAPIKESTYAIIEAQGITGLSYIQLQGSINH 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + T + + +I + PS + + S K + I+ + I
Sbjct: 120 SKELKTGDT-KEEYGIIYSRPSTFSRLDKTITSLSTKAEQIFERAENIMSDKNLKNFEAI 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + + + N
Sbjct: 179 LENSAKVSESTSKTMANLEAQNKEINQLLKESIEAAKGIQAMSHSFTSAIDNTGIDTMDN 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
V++ + + + + Q ++ L +
Sbjct: 239 VREAAKSVNTVMNGLNQKLEKGSFDMDLLVKENLLPLQQTLEELHLVLNETKD 291
>gi|292490601|ref|YP_003526040.1| hypothetical protein Nhal_0467 [Nitrosococcus halophilus Nc4]
gi|291579196|gb|ADE13653.1| Mammalian cell entry related domain protein [Nitrosococcus
halophilus Nc4]
Length = 334
Score = 114 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/324 (16%), Positives = 119/324 (36%), Gaps = 4/324 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K Y VGLF + + I+WLS + + + SV GL+ +++V++
Sbjct: 1 MDTKVNYILVGLFTILLATALTAIIFWLS-AAPATKNYQTYLAYMRESVAGLNMNAAVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD++ P I TP+ T A + + GL GI Y+EL+ ++
Sbjct: 60 RGVDVGQVEAIELDKQNPERVRLTLAIEQGTPIKEDTIAILASNGLTGIAYVELTGGTQD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
T+ A + +I PS + + +++ + + +I +++ L
Sbjct: 120 SPTLQ--AEKGQSHPVIQTGPSLLMRLDTALTKLLTELTGVAGDLSRIAQSVNTVLIEQN 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +S + + Q + + ++ +
Sbjct: 178 QQALAETLRNTERLSKVLADLAANQENQQALRKTLHNTEHLTARLAGHGSQLETAVEDLV 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
ILE +S +Q ++ + +T + + + + + ++
Sbjct: 238 TILEAGAKASKQLPILVEQASRSLRPIEKTAEGLETLLRDGEQGF-RLFTQSTLPRIDQL 296
Query: 301 LENIADSTSNMRSSISAIREITDQ 324
L + T N+ + +
Sbjct: 297 LNDFDRVTRNLERFSQQVEQNPRT 320
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/196 (11%), Positives = 64/196 (32%), Gaps = 1/196 (0%)
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
++ + + +I ++ + + + L N
Sbjct: 129 QSHPVIQTGPSLLMRLDTALTKLLTELTGVAGDLSRIAQSVNTVLIEQNQQALAETLRNT 188
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN-NISALK 363
+ + + R+ + +T + + + + +L++ + A K
Sbjct: 189 ERLSKVLADLAANQENQQALRKTLHNTEHLTARLAGHGSQLETAVEDLVTILEAGAKASK 248
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ L + A R++ T+E + + + F+QS L I L+ + +
Sbjct: 249 QLPILVEQASRSLRPIEKTAEGLETLLRDGEQGFRLFTQSTLPRIDQLLNDFDRVTRNLE 308
Query: 424 DCLNNFERNPQDIVWG 439
E+NP+ +++G
Sbjct: 309 RFSQQVEQNPRTLLFG 324
>gi|82702737|ref|YP_412303.1| hypothetical protein Nmul_A1610 [Nitrosospira multiformis ATCC
25196]
gi|82410802|gb|ABB74911.1| Mammalian cell entry related protein [Nitrosospira multiformis ATCC
25196]
Length = 313
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 105/288 (36%), Gaps = 1/288 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + ++ +G F V + + WLS++ + +V GLS S V++
Sbjct: 1 MEPRAHHVLIGFFTVMTVTAALLFTLWLSKAPGDSVQRY-YTVVFNEAVRGLSIGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG +V L LD + P + +A+ ++ TP+ T A + G+ G + IE S +
Sbjct: 60 SGITVGDVVNLALDPQDPRNVIARVRVQGSTPIKEDTQARLALTGITGNSVIEFSGGSPD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ + T +P S+ EN ++ T
Sbjct: 120 SPDLVAKDDHKDPVIVATPSPIAKLLEHSDNMMADVTQLVMRAKEILSQENAKRLSRTLE 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T + + + N S + + ++ + + +L L ++
Sbjct: 180 NLEQTTAVIASQNDSVRGIVGELATASAQANSALREATQLMAATNTLVSEKGVPTLGNLD 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ ++ S + + + + + Q++ + +S
Sbjct: 240 RATASLAKVSASVDQLLLENRAALSGGMQGMNELGPALQELRNTMSAL 287
Score = 65.7 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/254 (11%), Positives = 88/254 (34%), Gaps = 4/254 (1%)
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS 256
+ +++ + D + + S +
Sbjct: 64 VGDVVNLALDPQDPRNVIARVRVQGSTPIKEDTQARLALTGITGNSVIEFSGGSPDSPDL 123
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
+ + + T ++ + D++++D + + + EN + + +
Sbjct: 124 VAKDDHKDPVIVATPSPIAKLLEHSDNMMADVTQLVMRAKEILSQENAKRLSRTLENLEQ 183
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
I Q + + + ++ N + ++ +LM+ N + + K +L + RA
Sbjct: 184 TTAVIASQNDSVRGIVGELATASAQANSALREATQLMAATNTLVSEKGVPTL-GNLDRAT 242
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ S +++ + L G+N++ +++L+ T++ + + NP
Sbjct: 243 ASLAKVSASVDQLLLENRAALSG-GMQGMNELGPALQELRNTMSALARTVRRLDENPAAY 301
Query: 437 VWGREKGSVKIYKP 450
+ GREK ++ +P
Sbjct: 302 LTGREK--IEELEP 313
>gi|298530714|ref|ZP_07018116.1| Mammalian cell entry related domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510088|gb|EFI33992.1| Mammalian cell entry related domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 505
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/373 (13%), Positives = 121/373 (32%), Gaps = 8/373 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ + VG+FV+ + + L+R E+ +V GL T+S V
Sbjct: 3 KTASVEIKVGIFVLIAIVLLGYLTTVLTRDRIITRDTYEIHAYF-DNVTGLRTNSPVEIA 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
GI VG + + L + + IRPD ++ + ATIRT+G+ G ++E++ +
Sbjct: 62 GIDVGTVKDITLHEN---RARVTMAIRPDIDVHADSQATIRTRGVLGDKFVEVNPGSATE 118
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
T+ + + S S+ E + +
Sbjct: 119 PTLEDGGVVSRGVQPTDLDQVMARIGDIADDISEVSRSVSNVFGGPEGEQDMREFFDNLR 178
Query: 182 ----NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
++ I A I I + + N + +
Sbjct: 179 EAAVHMNQIVQTNARGIEKIVANLQDFSGDLKTISETNKEGITHIVDNFSQASSQLNVSL 238
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + V + + D+R T + + + +K+D + +T
Sbjct: 239 EQLGEIMDTAQHGEGPVATLLEDRQMSEDMRRTAASLESLTRKLDEGEGTLGKLISEDDT 298
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
+++ D + + + D R + +++ +++ ++ ++S I+
Sbjct: 299 GRKIDDALDGINEFLDRYDRFQTVVDFRSEYMASTGDMKSYLDLTLQPAEDRFYMLSLID 358
Query: 358 NISALKENNSLFK 370
+ +
Sbjct: 359 DPKGRTRTTETVE 371
>gi|114320359|ref|YP_742042.1| hypothetical protein Mlg_1203 [Alkalilimnicola ehrlichii MLHE-1]
gi|114226753|gb|ABI56552.1| Mammalian cell entry related domain protein [Alkalilimnicola
ehrlichii MLHE-1]
Length = 310
Score = 114 bits (284), Expect = 3e-23, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 107/297 (36%), Gaps = 5/297 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV+ + + +L + P + + + SV GL+ + VR+
Sbjct: 1 METRVSYALVGLFVILLTLAIIGAGLYLGGDIRT-QPHTDYAVYMDESVAGLNVSAPVRY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L+ +P+ + P+ T AT+R+QGL GI++IELS
Sbjct: 60 RGVDVGRVQAITLNPRHPDEVRIVISVEERVPIGRETVATLRSQGLTGISFIELSG--ST 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH-IQKIIENIEKPLTTT 179
+ + + PS + + + + + E + +
Sbjct: 118 TDPVTPQPRAGDDLPALRTVPSFGSRLEQTVDEALGVMRVVADEVRDLLREENRERVARL 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHS-SDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N + LA +D+ M +++ D + +
Sbjct: 178 LQNANVLVANLAEGSEDLDQTMVRFNQLLDQGNEAAARLPESMDRLDDTLARWARLADDL 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++S D + ++ + + Q ++ L DFS + +
Sbjct: 238 GRTGDTLDALASRGETTLIDVNQTLIPELGTLMYEMRRLSQDLERTLEDFSDEPQML 294
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 61/174 (35%), Gaps = 9/174 (5%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
R + Q +D L EN ++++ + + + +
Sbjct: 135 RTVPSFGSRLEQTVDEALGVMRVVADEVRDLLREENRERVARLLQNANVLVANLAEGSED 194
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
+ T+ + N+++ + E M ++++ R T + ++
Sbjct: 195 LDQTMVRFNQLLDQGNEAAARLPESMDRLDD---------TLARWARLADDLGRTGDTLD 245
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
L + +Q+ + ++ L+ +++ + L +F PQ +++GR+
Sbjct: 246 ALASRGETTLIDVNQTLIPELGTLMYEMRRLSQDLERTLEDFSDEPQMLIYGRQ 299
>gi|197105493|ref|YP_002130870.1| ABC transporter, periplasmic substrate-binding protein
[Phenylobacterium zucineum HLK1]
gi|196478913|gb|ACG78441.1| ABC transporter, periplasmic substrate-binding protein
[Phenylobacterium zucineum HLK1]
Length = 323
Score = 114 bits (283), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 1/134 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME Y VGL + ++ I WL+R Q+ I G V GLS V+F
Sbjct: 1 MEKNANYALVGLSTLILVAALAIFIVWLARF-QFAQANDTYDILFQGPVRGLSEGGEVQF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + + LD+ P+ +A+ + D P+ + AT+ QG+ G+ YI+++
Sbjct: 60 NGIKVGEVTKIALDRTNPSRVIARVQVTSDVPIRVDSYATLEPQGITGVNYIQITAGTPS 119
Query: 121 KKTIFQIATERNQR 134
+ + A +R +R
Sbjct: 120 RPLLKDEAQKRCER 133
>gi|238784664|ref|ZP_04628669.1| hypothetical protein yberc0001_28080 [Yersinia bercovieri ATCC
43970]
gi|238714436|gb|EEQ06443.1| hypothetical protein yberc0001_28080 [Yersinia bercovieri ATCC
43970]
Length = 313
Score = 114 bits (283), Expect = 4e-23, Method: Composition-based stats.
Identities = 53/293 (18%), Positives = 122/293 (41%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ + + I V GLS S+V++
Sbjct: 1 METRAHHVVIGLFTLIVVSAALLFCLWLTNAGA-NRQFKLYDIVFNEPVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG ++ L LD E PN A+ + TP+ T A + G+ G + I+ S+ +
Sbjct: 60 SGIRVGEVIQLRLDSENPNKVWARIRVSASTPIRQDTQARLTVAGITGTSNIQFSSSNQS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + +I ATPS ++ ++N EN ++ + +++E + T
Sbjct: 120 SPLLEGQ---DGEIPIIIATPSPMSQLLANGENFMSNANEVLVRLNQLLEPDNQQRLIRT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ I+ +A+ I M+ + ++++ N + L +
Sbjct: 177 LDNLALITQTVADQRGDIRTMLQQLAQASKQANETLAQTNRLLRNANGLMDGQGKQLVSD 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S + + ++ + + ++ L+ +
Sbjct: 237 AAKTMASLQKTSTILNQLVSENKTSLSNGMQGMSELGPAVDELRRTLATLRAA 289
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 75/183 (40%), Gaps = 4/183 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +S+ + + +N + + + + DQR I
Sbjct: 135 ATPSPMSQLLANGENFMSNANEVLVRLNQLLEPDNQQRLIRTLDNLALITQTVADQRGDI 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N++ + L+ N + + L DA + M + + TS +N+
Sbjct: 195 RTMLQQLAQASKQANETLAQTNRLLRNANGLM-DGQGKQLVSDAAKTMASLQKTSTILNQ 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G++++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVSENKTSLSN-GMQGMSELGPAVDELRRTLATLRAAVSRLEENPAALLRGRERT--QEF 310
Query: 449 KPK 451
P+
Sbjct: 311 TPR 313
>gi|195953213|ref|YP_002121503.1| virulence factor Mce family protein [Hydrogenobaculum sp. Y04AAS1]
gi|195932825|gb|ACG57525.1| virulence factor Mce family protein [Hydrogenobaculum sp. Y04AAS1]
Length = 523
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 74/456 (16%), Positives = 156/456 (34%), Gaps = 56/456 (12%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK Y +GLF++ F S + + +V GLS + VR
Sbjct: 1 MKSK--YFKLGLFLLLSAIAFAFMAISFSSIRYFFEKSNTYEALL-DNVHGLSVGAEVRV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ GR+ + L ++ D P+Y +I T GL G Y+ +
Sbjct: 58 NGVKAGRVEKISF---RNGKVLVVFSVKKDIPIYKDAEVSIGTLGLMGDKYVSVEEGHSI 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + N + + T S I + A+N S S+ + I + + I+ +
Sbjct: 115 YGELPPNSMIEN-IGVSSDTESLIKNLNNTAKNFSVVASNLASIISQNRDQIQGIIQNLD 173
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + ++T++A N + + + + + Q
Sbjct: 174 SLTKNLNTMVAQNQDALRQTISNLDM---------------------------LTYQLNL 206
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + I + D+R + + + + +T
Sbjct: 207 TLPQTIADIDRTAKNLAQITGQNKEDIRTLVENLKVLSSTLKD------------QTPVL 254
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN--- 357
+ N+ + N+ + + + +I ++ +L SS + ++++KIN
Sbjct: 255 MANLNTLSQNLNNLVVENQNGVHT------SIKNFAELSKSLKQSSDELNQILAKINTGQ 308
Query: 358 -NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
+ L + SL+ +A A+ TF + +NR IG + F I +L +
Sbjct: 309 GTLGKLVNDKSLYANANDALSTFSHFGKIVNRSNLYIGGRFELFRAGQSKGILSLKFQPN 368
Query: 417 ETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
+ + + N ++ YKP++
Sbjct: 369 NHEYYLFEIVGNSMGRVTTQYINNNPQTIYEYKPEY 404
>gi|15837902|ref|NP_298590.1| hypothetical protein XF1301 [Xylella fastidiosa 9a5c]
gi|9106292|gb|AAF84110.1|AE003963_7 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 308
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 98/309 (31%), Gaps = 3/309 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + +V GLS S V++
Sbjct: 1 METKANYVLIGSFTILTGLALLIFGLWAAKYSS-DRTWQNYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAIGSITQLTLAPNDPRQVIAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + ++ +I TPS + A + +++ D + I
Sbjct: 120 SPSL--TSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLSDKNVAAISTILQNMQKI 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + S + ++ + +L+ L ++ ++
Sbjct: 178 SGQVSDSDTGLKALLTSAHDATRQLNAALATTNGTVQQLDNNLVKQLPVILNKLEATLTK 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+S + + + T E+ I L + + +
Sbjct: 238 IDATASNANSILDNNQAAINSFASEGLSQFAPTMSELRNLIRDLRQISNKLEDNPKRYLL 297
Query: 301 LENIADSTS 309
N
Sbjct: 298 GRNAPKEFD 306
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 74/200 (37%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + ++ Q + ++ + ++ +N+A ++ +
Sbjct: 112 QLSGGTPESPSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLSDKNVAAISTIL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ +++D + + + + + T LN + + +++N +K+ +
Sbjct: 172 QNMQKISGQVSDSDTGLKALLTSAHDATRQLNAALATTNGTVQQLDNNL-VKQLPVILNK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + T+ N + + + +F+ GL+ + +L+ + N E
Sbjct: 231 LEATLTKIDATASNANSILDNNQAAINSFASEGLSQFAPTMSELRNLIRDLRQISNKLED 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP+ + GR K + PK
Sbjct: 291 NPKRYLLGRNAP--KEFDPK 308
>gi|299131821|ref|ZP_07025016.1| Mammalian cell entry related domain protein [Afipia sp. 1NLS2]
gi|298591958|gb|EFI52158.1| Mammalian cell entry related domain protein [Afipia sp. 1NLS2]
Length = 289
Score = 113 bits (282), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 79/201 (39%), Gaps = 6/201 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ +F ++W + I G+ GL T +V F
Sbjct: 1 METRANYLLIGAFTLAVIAAAFGFVFWFQNLGSVAQRS-PIRIVFEGAASGLRTGGNVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + + LD P + A + P+ T + GL G++ + L
Sbjct: 60 NGIKIGEVTSIKLD--DPKRVVVIASVDKSAPIRADTLVGLEFAGLTGVSAVSLKGGS-- 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I + +TA P+ I T + ++ Q + + + L T
Sbjct: 116 -LEAGGIPVADDGVPTLTADPNAIMDIGEAVRATLQNVNKLVTDNQAALHDSMENLKTFS 174
Query: 181 ANIETISTVLANNISHIDKMM 201
+ S+ + + + +D +M
Sbjct: 175 KALADNSSRIDSIMVGVDSLM 195
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + + +TD + + ++ ++ + L D+S + +M ++++ K+ +
Sbjct: 147 ATLQNVNKLVTDNQAALHDSMENLKTFSKALADNSSRIDSIMVGVDSLMGGKDGEG--GE 204
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
Q+A +FR+ ++ +++ ++ +D + L+ + T+ +NNF+R
Sbjct: 205 LQKAARSFRELADNLDKRTAALT-----------SDGRALISDSRRTLGDISRAVNNFDR 253
Query: 432 NPQDIVWG 439
NP +++G
Sbjct: 254 NPTRVLFG 261
>gi|46203119|ref|ZP_00052045.2| COG1463: ABC-type transport system involved in resistance to
organic solvents, periplasmic component
[Magnetospirillum magnetotacticum MS-1]
Length = 144
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F + + +F ++WL ++ + I GSV GL+ S+V F
Sbjct: 1 METRANYALIGAFTIGAVIAAFGFVFWLQGGSR-GQATQALRIVFSGSVGGLAKGSTVSF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
NGI VG + + L + P +A + P TPL T
Sbjct: 60 NGIKVGEALDVRLLPQDPRRVVAVVQVDPSTPLRADT 96
>gi|299132340|ref|ZP_07025535.1| protein of unknown function DUF330 [Afipia sp. 1NLS2]
gi|298592477|gb|EFI52677.1| protein of unknown function DUF330 [Afipia sp. 1NLS2]
Length = 370
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV+SI F +YWL+ + +R V GL + V F
Sbjct: 1 METRAPYIIVGLFVLSIAAAIFGFVYWLNNAGGLGARSV-YQVRFDEPVPGLLVGAGVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
NGI VG + L LD + P A + DTP+ T + QGL G
Sbjct: 60 NGIRVGEVTRLALDPQSPRRVNASVSVLTDTPVRADTKVGLEFQGLTG 107
>gi|238764191|ref|ZP_04625144.1| hypothetical protein ykris0001_6570 [Yersinia kristensenii ATCC
33638]
gi|238697604|gb|EEP90368.1| hypothetical protein ykris0001_6570 [Yersinia kristensenii ATCC
33638]
Length = 313
Score = 113 bits (282), Expect = 5e-23, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 120/293 (40%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ + + I V GLS S+V++
Sbjct: 1 METRAHHVVIGLFTLIVVSAALLFCLWLTNAGS-NRQFKLYDIVFNEPVSGLSQGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG ++ L LD E PN A+ + TP+ T A + G+ G +
Sbjct: 60 SGIRVGEVIQLRLDSEDPNKVWARIRVSASTPIREDTQARLTVAGITGTS---NIQFSSS 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + + + +I ATPS ++ ++N EN ++ + +++ + TT
Sbjct: 117 TPSSPLLEGKDGEIPIIIATPSPMSQLLANGENFMSNANEVLMRLNQLLAPDNQQRLITT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ ++ +A+ I M+ + ++++ N + L +
Sbjct: 177 LDNLALVTQTVADQRQDIRTMLQQLAQASKQANETLAQTNRLLRSANGLMDGQGKQLVND 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K + ++++ + ++ L+ +
Sbjct: 237 AAKTMASLQNTSIILNKLVSENQTSLNNGMQGMNELGPAVDELRRTLATLRAA 289
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +S+ + + +N + + + + + DQRQ I
Sbjct: 135 ATPSPMSQLLANGENFMSNANEVLMRLNQLLAPDNQQRLITTLDNLALVTQTVADQRQDI 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N++ + L+ N + + L DA + M + ++TS +N+
Sbjct: 195 RTMLQQLAQASKQANETLAQTNRLLRSANGLM-DGQGKQLVNDAAKTMASLQNTSIILNK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVSENQTSLNN-GMQGMNELGPAVDELRRTLATLRAAVSRLEENPAALLRGRERT--QEF 310
Query: 449 KPK 451
P+
Sbjct: 311 TPR 313
>gi|28198462|ref|NP_778776.1| ABC transporter permease [Xylella fastidiosa Temecula1]
gi|182681135|ref|YP_001829295.1| hypothetical protein XfasM23_0577 [Xylella fastidiosa M23]
gi|28056546|gb|AAO28425.1| ABC transporter permease [Xylella fastidiosa Temecula1]
gi|182631245|gb|ACB92021.1| Mammalian cell entry related domain protein [Xylella fastidiosa
M23]
gi|307579583|gb|ADN63552.1| hypothetical protein XFLM_08240 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 308
Score = 113 bits (281), Expect = 5e-23, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 100/309 (32%), Gaps = 3/309 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + +V GLS S V++
Sbjct: 1 METKANYVLIGSFTILTGLALLIFGLWAAKYSS-DRTWQNYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAIGSITQLTLAPNDPRQVVAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + ++ +I TPS + A + +++ D + I
Sbjct: 120 SPSL--TSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLSDKNVAAISTILQNMQKI 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + S + + T ++ + +L+ L ++ ++
Sbjct: 178 SGQVSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNLVKQLPIILNKLEATLTK 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+S + + + T E+ I L + + +
Sbjct: 238 IDATASNANSILDNNQAAINSFANEGLSQFAPTMSELSNLIRDLRQISNKLEGNPKRYLL 297
Query: 301 LENIADSTS 309
+
Sbjct: 298 GRDAPKEFD 306
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 74/200 (37%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + ++ Q + ++ + ++ +N+A ++ +
Sbjct: 112 QLSGGTPESPSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLSDKNVAAISTIL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ +++D + + + + + T LN + + +++N +K+ +
Sbjct: 172 QNMQKISGQVSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNL-VKQLPIILNK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + T+ N + + + +F+ GL+ + +L + N E
Sbjct: 231 LEATLTKIDATASNANSILDNNQAAINSFANEGLSQFAPTMSELSNLIRDLRQISNKLEG 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP+ + GR+ K + PK
Sbjct: 291 NPKRYLLGRDAP--KEFDPK 308
>gi|71274909|ref|ZP_00651197.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Dixon]
gi|71898797|ref|ZP_00680965.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Ann-1]
gi|71901851|ref|ZP_00683914.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Ann-1]
gi|170729827|ref|YP_001775260.1| ABC transporter permease [Xylella fastidiosa M12]
gi|71164641|gb|EAO14355.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Dixon]
gi|71728379|gb|EAO30547.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Ann-1]
gi|71731383|gb|EAO33446.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Ann-1]
gi|167964620|gb|ACA11630.1| ABC transporter permease [Xylella fastidiosa M12]
Length = 308
Score = 113 bits (281), Expect = 7e-23, Method: Composition-based stats.
Identities = 49/309 (15%), Positives = 100/309 (32%), Gaps = 3/309 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + +V GLS S V++
Sbjct: 1 METKANYVLIGSFTILTGLALLIFGLWAAKYSS-DRTWQNYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAIGSITQLTLAPNDPRQVVAHIRVNSTTPVKKDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + ++ +I TPS + A + +++ D + I
Sbjct: 120 SPSL--TSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLSDKNVAAISTILQNMQKI 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + S + + T ++ + +L+ L ++ ++
Sbjct: 178 SGQVSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNLVKQLPVILNKLEATLTK 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+S + + + T E+ I L + + +
Sbjct: 238 IDATASNANSILDNNQAAINSFANEGLSQFAPTMSELRNLIRDLRQISNKLEGNPKRYLL 297
Query: 301 LENIADSTS 309
+
Sbjct: 298 GRDAPKEFD 306
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/200 (12%), Positives = 75/200 (37%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + ++ Q + ++ + ++ +N+A ++ +
Sbjct: 112 QLSGGTPESPSLTSIYKDDAPIIQTTPSALQNITDTANDIVERLYDVLSDKNVAAISTIL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ +++D + + + + + T LN + + +++N +K+ +
Sbjct: 172 QNMQKISGQVSDSDTGLEALLTSARDATRQLNTTLTTANGTVQQLDNNL-VKQLPVILNK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + T+ N + + + +F+ GL+ + +L+ + N E
Sbjct: 231 LEATLTKIDATASNANSILDNNQAAINSFANEGLSQFAPTMSELRNLIRDLRQISNKLEG 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP+ + GR+ K + PK
Sbjct: 291 NPKRYLLGRDAP--KEFDPK 308
>gi|123441586|ref|YP_001005572.1| hypothetical protein YE1249 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|332162488|ref|YP_004299065.1| hypothetical protein YE105_C2866 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|122088547|emb|CAL11341.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|318606568|emb|CBY28066.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component USSDB6C [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325666718|gb|ADZ43362.1| hypothetical protein YE105_C2866 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861184|emb|CBX71441.1| hypothetical protein YEW_CA08660 [Yersinia enterocolitica W22703]
Length = 313
Score = 113 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 51/293 (17%), Positives = 118/293 (40%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF + ++ + WL+ + + I V GLS S V++
Sbjct: 1 METRAHHVVIGLFTLIVVSAALLFCLWLTNAGS-NRQFKLYDIVFNEPVSGLSQGSIVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD E PN A+ + TP+ T A + G+ G +
Sbjct: 60 SGIRVGEVTQLRLDSENPNKVWARIRVSASTPIRQDTQARLTVAGITGTS---NIQFSSS 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL-TTT 179
+ + + + +I ATPS ++ ++N EN ++ + +++ + TT
Sbjct: 117 TPSSPLLEGKDGEIPIIIATPSPMSQLLANGENFMSNANEVLMRLNQLLAPDNQQRLITT 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N+ ++ +A+ I M+ + ++++ N + L +
Sbjct: 177 LDNLALVTQTVADQRQDIRTMLQQLAQASKQANETLAQTNRLLRNANGLMDGQGKQLVND 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++Q +S K + ++++ + ++ L+ +
Sbjct: 237 AAKTMASLQNTSIILNKLVSENQTSLNNGMQGMNELGPAVDELRRTLATLRAA 289
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 78/183 (42%), Gaps = 4/183 (2%)
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T ++ ++ +S+ + + +N + + + + + DQRQ I
Sbjct: 135 ATPSPMSQLLANGENFMSNANEVLMRLNQLLAPDNQQRLITTLDNLALVTQTVADQRQDI 194
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + N++ + L+ N + + L DA + M + ++TS +N+
Sbjct: 195 RTMLQQLAQASKQANETLAQTNRLLRNANGLM-DGQGKQLVNDAAKTMASLQNTSIILNK 253
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +L N G+N++ V +L+ T+ ++ E NP ++ GRE+ + +
Sbjct: 254 LVSENQTSLNN-GMQGMNELGPAVDELRRTLATLRAAVSRLEENPAALLRGRERT--QEF 310
Query: 449 KPK 451
P+
Sbjct: 311 TPR 313
>gi|167647528|ref|YP_001685191.1| hypothetical protein Caul_3566 [Caulobacter sp. K31]
gi|167349958|gb|ABZ72693.1| Mammalian cell entry related domain protein [Caulobacter sp. K31]
Length = 312
Score = 113 bits (280), Expect = 8e-23, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 111/310 (35%), Gaps = 6/310 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME Y VG + + WL++ + ++ + G V GLS V F
Sbjct: 1 MERNANYALVGAMTLVLFMGLLVFAVWLAKLS-FNQEYDLYDVLFVGPVRGLSDGGEVHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + + LD+ PN +A+ + D P+ + AT+ QG+ G+ Y++++
Sbjct: 60 NGIKVGEVTKIALDKSDPNRVIARVRVTSDVPIKTDSYATLEPQGITGVNYVQITAGAPA 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + + + + ++ I R + + ++ K ++ I
Sbjct: 120 KPLLKSTVKKDQVPVIRSQRSALSDLLEGGGTVLTRTIEALDRVNRVLSDDNVKTVSAAI 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT-----ITDLITSLDKMIKAID 235
+++++++ L I Q +S + + K +
Sbjct: 180 SDVQSVTAELRERKEIIADAQKALQSIEATSTRIGELSDSANGLVNGDAKRTLKNLGDAA 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + ++D + + T Q + +D L+ + ++
Sbjct: 240 DELKATAKDVRGMVGKLEGPTTDFATTGLPQLSAAVVTLQSAAESLDRLVGEVEQNPRAL 299
Query: 296 ETSAFLENIA 305
+ + +
Sbjct: 300 VSKPPAKELE 309
>gi|218886598|ref|YP_002435919.1| hypothetical protein DvMF_1503 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218757552|gb|ACL08451.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 307
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 93/292 (31%), Gaps = 4/292 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + Y VG+F + + + I W + + + I G V GLS + V F
Sbjct: 1 MEIRASYVLVGVFTLMAVVGALAFILWTAGRGS-GVDLVQYDINFTGHVSGLSVANDVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + + P + + +TP+ + A++ +G+ G+T +++S
Sbjct: 60 NGVKVGSVKAITISPTDPGRVKVRVEMAANTPVREDSMASLEARGITGVTVVQISGGTAT 119
Query: 121 KKTIFQIATERNQRAMIT--ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ E + + ++ I +
Sbjct: 120 SPLLKPHPGEEVAVIPAQLSRLEALFAGLPAVVSDSRDLIQRIAGMADDENRRALAQTLQ 179
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++ + A+ + I + ++ S D+ L ++
Sbjct: 180 SLDVLTARLAARADAMDRIIGNLD-VTTRRLANASAGLEGATGDMRDYLRTDLRESTRAV 238
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + + + D+R +++ +D L S
Sbjct: 239 GDMARRMDGMVARAEPGVAKFSGEGLEDMRRLLAEARQLVGTLDRLAHKVES 290
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 68/186 (36%), Gaps = 4/186 (2%)
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
E +++ L + + + N R+ ++ +
Sbjct: 123 LKPHPGEEVAVIPAQLSRLEALFAGLPAVVSDSRDLIQRIAGMADDENRRALAQTLQSLD 182
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT 382
++ + + ++ I NL+ ++++ A + + + + L D + + D
Sbjct: 183 VLTARLAARADAMDRIIGNLDVTTRRLANASAGLEGATGDMRDY-LRTDLRESTRAVGDM 241
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ +++ + + FS GL D++ L+ + ++ V D + E +P+ ++G
Sbjct: 242 ARRMDGMVARAEPGVAKFSGEGLEDMRRLLAEARQLVGTLDRLAHKVESDPRRFLFG--- 298
Query: 443 GSVKIY 448
V Y
Sbjct: 299 NPVPEY 304
>gi|209885949|ref|YP_002289806.1| putative ABC transporter [Oligotropha carboxidovorans OM5]
gi|209874145|gb|ACI93941.1| putative ABC transporter [Oligotropha carboxidovorans OM5]
Length = 371
Score = 112 bits (279), Expect = 9e-23, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VGLFV+SI F +YWL+ + ++ V GL + V F
Sbjct: 1 METRAPYIIVGLFVLSIAAAVFGFVYWLNNAGGLGARSI-YQVQFDEPVPGLLVGAGVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
NGI VG + L LD + P A + DTP+ T + QGL G
Sbjct: 60 NGIRVGEVTRLALDPQSPRRVNASVSVLTDTPVRADTKVGLEFQGLTG 107
>gi|157736377|ref|YP_001489060.1| ABC transporter, periplasmic substrate-binding protein, putative
[Arcobacter butzleri RM4018]
gi|157698231|gb|ABV66391.1| ABC transporter, periplasmic substrate-binding protein, putative
[Arcobacter butzleri RM4018]
Length = 302
Score = 112 bits (279), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + +GLFV S+ I+WL + D + I SV GL+ SS++F
Sbjct: 1 MDTKINFFKIGLFVSSLFTLLVIFIFWLGKYGLEDKKYDDYSIFFSESVSGLNIGSSIKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G VG + + ++ I+ TP+ A + G+ G+ YIEL
Sbjct: 61 MGFEVGTVKDIKINPYNSEEIQIDIQIQKGTPIKEDNFAILGNLGITGLKYIELKGGSNN 120
Query: 121 KKTI 124
K +
Sbjct: 121 SKLL 124
>gi|315635509|ref|ZP_07890775.1| ABC superfamily ATP binding cassette transporter, substrate-binding
protein [Arcobacter butzleri JV22]
gi|315480267|gb|EFU70934.1| ABC superfamily ATP binding cassette transporter, substrate-binding
protein [Arcobacter butzleri JV22]
Length = 302
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 54/124 (43%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + +GLFV S+ I+WL + D + I SV GL+ SS++F
Sbjct: 1 MDTKINFFKIGLFVSSLFTLLVIFIFWLGKYGLEDKKYDDYSIFFSESVSGLNIGSSIKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G VG + + ++ I+ TP+ A + G+ G+ YIEL
Sbjct: 61 MGFEVGTVKDIKINPYNSEEIQIDIQIQKGTPIKEDNFAILGNLGITGLKYIELKGGSNN 120
Query: 121 KKTI 124
K +
Sbjct: 121 SKLL 124
>gi|303327743|ref|ZP_07358183.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Desulfovibrio sp. 3_1_syn3]
gi|302862104|gb|EFL85038.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Desulfovibrio sp. 3_1_syn3]
Length = 149
Score = 112 bits (278), Expect = 1e-22, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 3/134 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S T+VG+FV+ L + L R + E+ R S GL + V
Sbjct: 1 MNS-VRETAVGIFVLLGLICVAYLAIKLGRMEFFANQGFELSARF-DSASGLRVGADVEL 58
Query: 61 NGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+PVGR+V + LD + ++ + + L + A+I+T GL G Y+ LS
Sbjct: 59 AGVPVGRVVAISLDPDPLRTQAVVHLRLDKNLRLSDDSIASIKTSGLIGDKYVSLSRGGS 118
Query: 120 EKKTIFQIATERNQ 133
EK +
Sbjct: 119 EKTIPPGGTITETE 132
>gi|126666399|ref|ZP_01737378.1| hypothetical protein MELB17_12461 [Marinobacter sp. ELB17]
gi|126629200|gb|EAZ99818.1| hypothetical protein MELB17_12461 [Marinobacter sp. ELB17]
Length = 312
Score = 111 bits (277), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 101/289 (34%), Gaps = 2/289 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + ++ +G+F +S + WL +++ + A + +V GLS + V +
Sbjct: 1 MEPRAHHFLIGMFTISTAAAALVFALWLGKTSN-EREWAWYEVAFDYTVGGLSEGNPVLY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG +V L L +E P + P++ T A++ + G + +
Sbjct: 60 NGVDVGDVVSLRLVRENPGEVRVLVRVDETIPMHEDTRASLVLANITGS-MSIEFSGGSQ 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + E + S + + +NIE+
Sbjct: 119 NSPLLIGSRENPPIIDAQRSALSGLLDNSQILMNKADQLLRNANQLFSNDNIEQVSAILS 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
E T++ + + + + Q + ++S + ++ +L + L+ ++
Sbjct: 179 NTREASETLVRKSAALDELFANLNQASANASQAAAQIAEVSGTADALLRNEGRSALRSMD 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ L N + + + +++ + L++ +
Sbjct: 239 RALGNFDAVMQRLNTLTSDNAGALDAGLQGMGELAPALRELRNTLNNLN 287
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/174 (13%), Positives = 69/174 (39%), Gaps = 4/174 (2%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ L++ +++ +NI ++ + ++ A + + +
Sbjct: 140 LSGLLDNSQILMNKADQLLRNANQLFSNDNIEQVSAILSNTREASETLVRKSAALDELFA 199
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ ++N + ++ + AE+ + + E S + RA+ F +++N
Sbjct: 200 NLNQASANASQAAAQIAEVSGTADALLRN-EGRSALRSMDRALGNFDAVMQRLNTLTSDN 258
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
L + G+ ++ +R+L+ T+N+ + + NP +WG + ++K
Sbjct: 259 AGAL-DAGLQGMGELAPALRELRNTLNNLNRFTRRLDENPAGTLWGVD--TIKE 309
>gi|313109006|ref|ZP_07794980.1| hypothetical protein PA39016_001650019 [Pseudomonas aeruginosa
39016]
gi|310881482|gb|EFQ40076.1| hypothetical protein PA39016_001650019 [Pseudomonas aeruginosa
39016]
Length = 309
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/291 (15%), Positives = 103/291 (35%), Gaps = 5/291 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + ++ +GLFVV + WLS + D I V GL+ S V++
Sbjct: 1 MEPRAHHVFIGLFVVLLGAIGIGFALWLSDTRS-DHDYQYYRIMFDEPVTGLTPGSQVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI +G +V L L P ++A+ I P+ T A + G+ G IELS
Sbjct: 60 SGITIGEVVALSLSPRDPRRAIARVRINATIPVRQDTRAELVITGITGNAVIELSDGGPN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + E + ++ + + + + R + + + + ++
Sbjct: 120 VPLLDRR--EDEEPLILAPRSAMASLVSGEGNSMTTLNGILLRTQELLSKENLALVHRSL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N+E + +A+ + I ++ S +S + + ++ Q +
Sbjct: 178 VNLEQTTGAVADQRAEIATLISNLT--EASRESTAAVRQANSTLRDANLLLNNDGKQIMV 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + N + + ++ L++ ++
Sbjct: 236 NTRDATASLERAAFRVETLLQNNQESLNQGLAATGPAMHELQQALANLNTV 286
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 66/168 (39%), Gaps = 7/168 (4%)
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ ++ + + + EN+A ++ + + DQR +I + I+ + +
Sbjct: 149 NSMTTLNGILLRTQELLSKENLALVHRSLVNLEQTTGAVADQRAEIATLISNLTEASRES 208
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ ++ + N + + + + + A + + ++ + + +L
Sbjct: 209 TAAVRQANSTLRDANLLLNN-DGKQIMVNTRDATASLERAAFRVETLLQNNQESL----N 263
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
GL + +LQ+ + + + L +RNP + G E +++ KP
Sbjct: 264 QGLAATGPAMHELQQALANLNTVLRRLDRNPAQYLLGGE--NIEETKP 309
>gi|226942632|ref|YP_002797705.1| MCE domain-containing protein [Azotobacter vinelandii DJ]
gi|226717559|gb|ACO76730.1| MCE domain protein [Azotobacter vinelandii DJ]
Length = 312
Score = 111 bits (276), Expect = 2e-22, Method: Composition-based stats.
Identities = 49/291 (16%), Positives = 104/291 (35%), Gaps = 9/291 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V + + + D + SV GL+ S V +
Sbjct: 1 METRAHHVLIGLFTVVA-VIAALLLALWLSKSSLDREFDHYEVLFNHSVSGLAVGSPVEY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L+LD + P + A I TP+ T + + G I+L +
Sbjct: 60 SGIRVGDVEQLWLDPQDPRMARALIRIDSGTPIKQDTRVRLLLANITGARSIQLFGGTPQ 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + E + +I A PS +N + E+ I+ + I
Sbjct: 120 SPRLER---EGGKPPLIVADPSPLNTLLDEGEDVMSSINSILTGASLLFSADNVGRLGHI 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+T + Q + T+ + IT L + +
Sbjct: 177 LEHLEQATGAIAA-----QRNELGQTVRQLNQLGRQTGTLLEEITRLARNANGLLDGDGR 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++L + Q S + +S+ ++ + + ++ + ++ +S+ +
Sbjct: 232 KLLASAQRSMSALERSTSRLDRLLEENQQALHNGMDGIAELGPAISELRTT 282
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 66/178 (37%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + + ++S +S + +N+ + A I QR ++ T+
Sbjct: 139 PLNTLLDEGEDVMSSINSILTGASLLFSADNVGRLGHILEHLEQATGAIAAQRNELGQTV 198
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + ++ L N + + L AQR+M ++ +++R +
Sbjct: 199 RQLNQLGRQTGTLLEEITRLARNANGLL-DGDGRKLLASAQRSMSALERSTSRLDRLLEE 257
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
L N G+ ++ + +L+ T+ + E +P GREK ++ + P
Sbjct: 258 NQQALHN-GMDGIAELGPAISELRTTLGGLRRVTRHLEDDPSGFFLGREK--MQEFAP 312
>gi|319788027|ref|YP_004147502.1| hypothetical protein Psesu_2439 [Pseudoxanthomonas suwonensis 11-1]
gi|317466539|gb|ADV28271.1| Mammalian cell entry related domain protein [Pseudoxanthomonas
suwonensis 11-1]
Length = 308
Score = 111 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/298 (15%), Positives = 95/298 (31%), Gaps = 13/298 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F + + W ++ + + +I +V GLS S+V++
Sbjct: 1 METRANYVLIGAFTIVVSVALLLFGLWAAKYSS-ERSWQRYMIVFDEAVTGLSAGSTVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G I L LD + P +A P+ T A + L G I+LS
Sbjct: 60 NGISIGSIDKLSLDPQDPRRVVAIIRADASVPVKTDTRAKLAITSLTGPAIIQLSGGSPG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII----------E 170
+ A + I PS + A +++
Sbjct: 120 APLL--TAVDTRDTPQIQTAPSALQNIADTANRIVERLDQVLSDQNVAHIGRTLENIEQI 177
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + A + V + + + S
Sbjct: 178 SASLAAKDEGMQDLLATARDAARSLDVTLQNTNATVQRVDQNLVQELPALISRLDSTLAR 237
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + + EN ++ Q+ T+ ++R + +++ ++++ + F
Sbjct: 238 LDSAAGNADAILGENRAAINSFANDGLAQLGPTLTELRGLIRDLRQISDRLENNPARF 295
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/181 (11%), Positives = 65/181 (35%), Gaps = 3/181 (1%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
T Q + ++ + ++ + +N+A + + + + + +
Sbjct: 131 TPQIQTAPSALQNIADTANRIVERLDQVLSDQNVAHIGRTLENIEQISASLAAKDEGMQD 190
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ T + +L+ + Q + +++ ++E +L + + + +
Sbjct: 191 LLATARDAARSLDVTLQNTNATVQRVDQNL-VQELPALISRLDSTLARLDSAAGNADAIL 249
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ +F+ GL + + +L+ + + E NP + GR+ K ++P
Sbjct: 250 GENRAAINSFANDGLAQLGPTLTELRGLIRDLRQISDRLENNPARFLLGRDG--AKEFEP 307
Query: 451 K 451
K
Sbjct: 308 K 308
>gi|209884493|ref|YP_002288350.1| putative ABC transporter [Oligotropha carboxidovorans OM5]
gi|209872689|gb|ACI92485.1| putative ABC transporter [Oligotropha carboxidovorans OM5]
Length = 288
Score = 111 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 6/201 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ +F ++W + I G+ GL T +V F
Sbjct: 1 METRANYLLIGAFTIAVIAAAFGFVFWFQNLGAV-AQRTPIRIIFEGAASGLRTGGNVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G + + LD P + A + P+ T + GL G++ + L
Sbjct: 60 NGIKIGEVTSIKLD--DPKRVVVIAAVDKSAPIRADTLVGLEFAGLTGVSSVSLKGGS-- 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I + + A P+ I T + ++ + + + L
Sbjct: 116 -LDAGGIPVADDGVPTLNADPNAIMDIGEAVRATLQNVNKLVTDNKDALHDSMANLKAFS 174
Query: 181 ANIETISTVLANNISHIDKMM 201
+ S + N ++ ++ +M
Sbjct: 175 KALADNSGRIDNIMAGVESLM 195
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 61/134 (45%), Gaps = 13/134 (9%)
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + + +TD + + ++ ++ + L D+S + +M+ + ++ KE D
Sbjct: 147 ATLQNVNKLVTDNKDALHDSMANLKAFSKALADNSGRIDNIMAGVESLMGNKEGQE--GD 204
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
Q+A +FR+ ++ +++ L+D + L+ + T+ +NNF+R
Sbjct: 205 LQQAARSFRELADNLDKRTA-----------VLLSDGRALITDSRRTLADISRAVNNFDR 253
Query: 432 NPQDIVWGREKGSV 445
NP +++G V
Sbjct: 254 NPTRVLFGASNADV 267
>gi|239813316|ref|YP_002942226.1| hypothetical protein Vapar_0297 [Variovorax paradoxus S110]
gi|239799893|gb|ACS16960.1| Mammalian cell entry related domain protein [Variovorax paradoxus
S110]
Length = 323
Score = 111 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 58/140 (41%), Gaps = 3/140 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + + G FV+ ++ + W +R + + V GL + VR+
Sbjct: 1 MENKAHAIAAGAFVLGLIAVLVGLVVWFTRDSTVRN---TYELSTRDPVSGLQPQAMVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG++ + D + + + + PL S+ AT+ QG+ G+ +I L +
Sbjct: 58 RGIAVGKVTSIDFDPKTKGNVRVRITVDQRVPLTTSSFATLSYQGVTGLAFIALDDKGES 117
Query: 121 KKTIFQIATERNQRAMITAT 140
+ + + + +
Sbjct: 118 NVALAPNNEDPPRIPLKPSM 137
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/191 (9%), Positives = 58/191 (30%), Gaps = 19/191 (9%)
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ E ++ + LLSD + K + A + +
Sbjct: 128 PPRIPLKPSMLAQLQDRGEAIVNQVDEATKRANQLLSDDNQKRAADALENIAAASASANT 187
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLF 369
++ + ++ + + + N S++ ++ + + + N
Sbjct: 188 LLKQLDNTVKT------GLNPALAALPNTLSSVKTAAGDVSRVANNFNTTVGRLNAPDGP 241
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
E+++ ++ ++ +F+ + L + + V ++
Sbjct: 242 -------------IERLSEGTKALAQSVDSFNAATLPRVNRVADDTSRAVRRLGRAADSI 288
Query: 430 ERNPQDIVWGR 440
NPQ +++G
Sbjct: 289 NDNPQSLLFGN 299
>gi|297538917|ref|YP_003674686.1| Mammalian cell entry related domain-containing protein
[Methylotenera sp. 301]
gi|297258264|gb|ADI30109.1| Mammalian cell entry related domain protein [Methylotenera sp. 301]
Length = 322
Score = 111 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 51/288 (17%), Positives = 95/288 (32%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+K Y VG FV+ + I W++ + SV GLST++ V++N
Sbjct: 8 ENKVNYALVGAFVLILGTILIAGILWIASGGINKQKYDTYLAIENESVAGLSTNALVKYN 67
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VGR+ + LD P + LI T + T AT++TQGL GI YIELS
Sbjct: 68 GVDVGRVSNISLDPINPQRVRLELLIVRGTLIKQDTLATLKTQGLTGIAYIELSGGNTHS 127
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ E + S + ++ + S EN++ +
Sbjct: 128 PLLVASEGEPYPEIKTIPSLSTRLESLLSSVAAKLEHLSGSFDGINSPENVKAFSSALSD 187
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T+ S M ++ + ++ + K ++ +
Sbjct: 188 IAAVSHTIAQRKDSLDAGMKSAASTFANTDQASKKLESLIVNVEKSAKAVQLMANDTAGA 247
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + + T ++ + +
Sbjct: 248 SRDVGSAAKTLGGDTHQFITETTPEIHNLIAELNVLSASLRRFSEQAE 295
Score = 36.8 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 20/177 (11%), Positives = 54/177 (30%), Gaps = 16/177 (9%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ + + S + EN+ +S + + I ++ + + + + + +
Sbjct: 155 LSSVAAKLEHLSGSFDGINSPENVKAFSSALSDIAAVSHTIAQRKDSLDAGMKSAASTFA 214
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
N + +S+K L+ + + + + D A ++ +
Sbjct: 215 NTDQASKKLESLIVNVEKSAKAVQL--MANDTAGASRDVGSAAKTLGGDTHQFITETTPE 272
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE-------KGSVKIYKP 450
+ + ++ L ERNP + G + S+K P
Sbjct: 273 IHNLIAELNVLS-------ASLRRFSEQAERNPAGFIAGPSPVPEGPGESSIKEQNP 322
>gi|163782389|ref|ZP_02177387.1| hypothetical protein HG1285_06365 [Hydrogenivirga sp. 128-5-R1-1]
gi|159882422|gb|EDP75928.1| hypothetical protein HG1285_06365 [Hydrogenivirga sp. 128-5-R1-1]
Length = 523
Score = 111 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/452 (11%), Positives = 134/452 (29%), Gaps = 55/452 (12%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+G FV+ F I ++ V GLS + VR +GI
Sbjct: 4 TTEIKLGAFVLFTAVSFAFLILTFGEIPFLRPDTKRYVVYFSD-VGGLSKGAEVRVSGIR 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
G++ + L+ + + L+ +ATI T GL G Y+ ++ +
Sbjct: 63 AGKVEEITLE---DSRVKVVFNVERRIRLFKDASATIGTLGLMGDKYLAVNPGTPSAGEL 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + I T++ + ++ +I+E + L T+ N+
Sbjct: 120 A-----EGESLKTAEGVADTDRLIRELTRTAEGFKLVAENLNRILEENRRNLRETLENLN 174
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ L + + + + + + E
Sbjct: 175 ALTQTLRRMAEENQQNLKVVL-----------------------AEMAQLTESLNSTLPE 211
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
I + + D+R + + ++ L M +
Sbjct: 212 AISSIDRLADELTGIASENREDIRVLVANLKSISDELRGELPQLVENMNTL--------- 262
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
S + + + R+ + + I + +T+ L SS + +++KI +
Sbjct: 263 ---------SKNLNEVVKENRRDLRTAIQNLSEMTARLRRSSNRLDNILAKIESGEGTIG 313
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL----QNFSQSGLNDIQNLVRKLQETVN 420
+ ++ + I + + ++ +L +
Sbjct: 314 KLVTDDELYESVSKGAKLFGEAGEVITKTKIYVGFGGEAYTGGDSKGYMSLRIEPDRKTY 373
Query: 421 HFDDCLNNFE-RNPQDIVWGREKGSVKIYKPK 451
+ + + + R + + G + K +KP+
Sbjct: 374 YLLEVVGDSRGRVYTEQIVGGNEIVKKEFKPE 405
>gi|255020160|ref|ZP_05292229.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Acidithiobacillus caldus ATCC 51756]
gi|254970302|gb|EET27795.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Acidithiobacillus caldus ATCC 51756]
Length = 171
Score = 111 bits (275), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 2/152 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+FV+ + + + + + V+ +V L S V+
Sbjct: 1 MRNRAVDWWVGIFVLLGIAALAVLAFRVGNLSGFQYGEGYVLHADFNNVGSLKVRSPVKL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + G+ +D + + I P L T A+I TQGL G YI L
Sbjct: 61 GGVTVGEVTGIRIDPKTF-QAEVSMRIEPQLKLPVDTGASIYTQGLLGEQYIALQPG-GM 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + T ++ + S AE
Sbjct: 119 PQDLKPGGTITLTQSAVNIDQLIGQMVFSKAE 150
>gi|283853086|ref|ZP_06370342.1| Mammalian cell entry related domain protein [Desulfovibrio sp.
FW1012B]
gi|283571553|gb|EFC19557.1| Mammalian cell entry related domain protein [Desulfovibrio sp.
FW1012B]
Length = 149
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T+VG+FV++ L + L + + + G ++ R V GL + + V
Sbjct: 1 MKKYAMETTVGVFVLAGLLCVAYLTVKLGKLDVFGGDSYPLVARFKD-VTGLKSGAYVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ + LD + N +L I+ L + A+I+T GL G ++++S +
Sbjct: 60 AGVRIGRVSAVALDPKD-NMALVTLEIQNGVRLTDDSIASIKTSGLIGDKFVKVSPGGSD 118
Query: 121 KKTIFQIATERNQ 133
+
Sbjct: 119 DVLKPGGTIVETE 131
>gi|294056024|ref|YP_003549682.1| Mammalian cell entry related domain protein [Coraliomargarita
akajimensis DSM 45221]
gi|293615357|gb|ADE55512.1| Mammalian cell entry related domain protein [Coraliomargarita
akajimensis DSM 45221]
Length = 152
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 49/117 (41%), Gaps = 3/117 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++N VG FV+ L + + + + G ++ S G+S S V
Sbjct: 1 MNNRNIELLVGCFVLLGLAAVLYLALQIGGARVFGGDTYQLNAEFS-SAAGVSEGSRVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+PVG + + L +++ + L T A+I+T GL G YI LS
Sbjct: 60 AGVPVGTVKQIQL--NDDFYAVVTLELPKSLELDDDTIASIKTSGLIGDRYIRLSPG 114
>gi|305432466|ref|ZP_07401628.1| ABC superfamily ATP binding cassette transporter, periplasmic
substrate-binding protein [Campylobacter coli JV20]
gi|304444505|gb|EFM37156.1| ABC superfamily ATP binding cassette transporter, periplasmic
substrate-binding protein [Campylobacter coli JV20]
Length = 298
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VGLFV + F S + WL ++ + I SV GL + VR
Sbjct: 1 MENKANYFFVGLFVFGVFFASIGFMLWLGGYSK-EESFEYYEIHTQESVAGLGIKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + + + I+ TP+ T AT++ QG+ G+ +++L K
Sbjct: 60 LGVEIGNVENISIYDKENLGVNILIKIKKGTPIKEDTFATLQFQGITGLKFVQLQGGSKN 119
Query: 121 KKTIF 125
+
Sbjct: 120 SPKLQ 124
>gi|325982945|ref|YP_004295347.1| Mammalian cell entry related domain-containing protein
[Nitrosomonas sp. AL212]
gi|325532464|gb|ADZ27185.1| Mammalian cell entry related domain protein [Nitrosomonas sp.
AL212]
Length = 298
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/281 (14%), Positives = 102/281 (36%), Gaps = 7/281 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + G+FV+ + W S ++ + ++ SV GL+ S+V +
Sbjct: 1 MENRAHALIAGIFVILLSISVALVAMWFSGNS---TKRTDYLVVTKESVSGLNPQSAVHY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ + D + P+ L + + + L S A + QG+ G+ YI+L+
Sbjct: 58 RGVNIGKVEKIQFDPDNPHQILIQIAVNENVTLRKSVYAQLGYQGVTGLAYIQLNDDGVN 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + T SG + N +K + + + +N + I
Sbjct: 118 NEILSDERIPMRRSLLDEVTGSGQD----LLSNVNKLVLKMHHLLNEQNQNHISQILQNI 173
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+A ++ + + + + +T K ++
Sbjct: 174 DKATKNFDGIAGHLQPVLNSFTELTIESGTLVKRLDQLLGELNLTVAKANQKEGIFDSLS 233
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
Q + + + K S ++ ++ + +E Q +
Sbjct: 234 QSSQELATTIPELRKLSHSLLRNSSNLDKVLYQLEENPQSL 274
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 22/172 (12%), Positives = 62/172 (36%), Gaps = 12/172 (6%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + ++ S + + L+ + S ++ S+++ + N I I N
Sbjct: 114 DGVNNEILSDERIPMRRSLLDEVTGSGQDLLSNVNKLVLKMH-HLLNEQNQNHISQILQN 172
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI--GNNLQN 399
++ +++ F + + + L ++ + ++N + + +
Sbjct: 173 IDKATKNFDGIAGHLQPVLNS--FTELTIESGTLVKRLDQLLGELNLTVAKANQKEGIFD 230
Query: 400 FSQSGLNDIQNLVRKLQETV-------NHFDDCLNNFERNPQDIVWGREKGS 444
++ + +L++ ++ D L E NPQ +++GR S
Sbjct: 231 SLSQSSQELATTIPELRKLSHSLLRNSSNLDKVLYQLEENPQSLIFGRSPSS 282
>gi|328954407|ref|YP_004371741.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
gi|328454731|gb|AEB10560.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
Length = 302
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/288 (16%), Positives = 98/288 (34%), Gaps = 2/288 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K VGLFV+ + + F+I W+ + Y A + + SV GL DS V+F
Sbjct: 1 MARKTSSFLVGLFVIIGVALTVFAIIWVGVTG-YFQQGATYVTYVDESVQGLQKDSVVKF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + + + I L + A + + G+ GI +I+L R
Sbjct: 60 RGVDVGRVEHIRIAPDN-KLVAIIMKINLPGDLTENIVAQLTSSGITGIMFIDLDYRRPG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ +I + PS IS + +++ T +
Sbjct: 119 APDLSPKIDFPSEYPIIPSKPSEYTRIISGINDVISRLNQIDIEGISTQLKDAIREITLL 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + ++LA + T + I + ++ + K +
Sbjct: 179 LKGDKVQSILAKTEKTAANLEALTGKANTLAGEVKLTEVIRETTATISEARKFVVDLNRQ 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + + ++ TT++ + +I D
Sbjct: 239 LYDLKLPETMGKTRNLLREAQAIGENLHRTTESLEMFADRIYERPPDL 286
>gi|217969577|ref|YP_002354811.1| hypothetical protein Tmz1t_1156 [Thauera sp. MZ1T]
gi|217506904|gb|ACK53915.1| Mammalian cell entry related domain protein [Thauera sp. MZ1T]
Length = 313
Score = 110 bits (274), Expect = 4e-22, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 91/289 (31%), Gaps = 1/289 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ ++ +GLF V ++ + WL + + D I +V GLS +V F
Sbjct: 1 METRAHHVLIGLFTVLVVGAALMFALWLGK-SDADRQFEVYDIVFQEAVSGLSKGGTVEF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI +G +V L LD +A+ + P+ T A + G+ G+T I L++
Sbjct: 60 NGIKIGDVVSLRLDPADARRVIARVRVDSAAPVRSDTRARLVPAGITGLTMIRLTSGEDP 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
T + R + +P T+ +N+ T
Sbjct: 120 ASTPLVSKGDEVARIIAAPSPLSRLLADGEDAITNVNDLLVQARELLSADNVASFGRTLG 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ A + TQ + +S + + L ++ L
Sbjct: 180 NLELATGALAAQREDLNAALREVTQASRDASTALAEAARMLGSANRLVEVQGTQTLDSAR 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + + + ++ L+
Sbjct: 240 DAMRAFERAMGTVDRLIADNRAPLDGGMRGLAEIGPAVAELRTTLASLR 288
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/178 (15%), Positives = 65/178 (36%), Gaps = 4/178 (2%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + +++ + + +N+A + + A + QR+ + + +
Sbjct: 140 PLSRLLADGEDAITNVNDLLVQARELLSADNVASFGRTLGNLELATGALAAQREDLNAAL 199
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + + + + + A ++ N + ++ +L A+ AM F ++R I
Sbjct: 200 REVTQASRDASTALAEAARMLGSANRLVEVQGTQTL-DSARDAMRAFERAMGTVDRLIAD 258
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
L GL +I V +L+ T+ E P D + G E K + P
Sbjct: 259 NRAPLDG-GMRGLAEIGPAVAELRTTLASLRIITRQLESRPADYLLGLEPT--KEFTP 313
>gi|29654063|ref|NP_819755.1| ABC transporter periplasmic substrate-binding protein [Coxiella
burnetii RSA 493]
gi|153209294|ref|ZP_01947329.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
burnetii 'MSU Goat Q177']
gi|154706397|ref|YP_001424138.1| hypothetical protein CBUD_0743 [Coxiella burnetii Dugway 5J108-111]
gi|161830138|ref|YP_001596959.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
burnetii RSA 331]
gi|165924019|ref|ZP_02219851.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
burnetii RSA 334]
gi|212219046|ref|YP_002305833.1| hypothetical protein CbuK_1526 [Coxiella burnetii CbuK_Q154]
gi|29541329|gb|AAO90269.1| hypothetical exported protein [Coxiella burnetii RSA 493]
gi|120575410|gb|EAX32034.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
burnetii 'MSU Goat Q177']
gi|154355683|gb|ABS77145.1| hypothetical exported protein [Coxiella burnetii Dugway 5J108-111]
gi|161762005|gb|ABX77647.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
burnetii RSA 331]
gi|165916542|gb|EDR35146.1| ABC transporter, periplasmic substrate-binding protein [Coxiella
burnetii RSA 334]
gi|212013308|gb|ACJ20688.1| hypothetical exported protein [Coxiella burnetii CbuK_Q154]
Length = 308
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 56/291 (19%), Positives = 124/291 (42%), Gaps = 5/291 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K YT VG F++ + S W S + + + V G+ST + VRF
Sbjct: 1 MDTKVNYTLVGFFIILLGAASIVIFLWFSTFRHRQTFDTYL-VYMHEEVSGISTQTPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + ++ P + I+ +TP+ ST AT+R++G+ G Y+ L L
Sbjct: 60 NGVKVGYVQKIEINPADPQQVVLTLKIKHETPITTSTVATLRSEGIMGTDYVALKALTAT 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN-IEKPLTTT 179
+ IA + +I + PS + + + +K I + S ++ K+ + + ++ +
Sbjct: 120 APPL--IAKPGEKYPVIPSEPSLLMKLSTALQEVTKTIKELSDNVGKVFDEKNRRAISAS 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ NI+ ++ L++N +ID +H+ + +S + I ++
Sbjct: 178 LVNIQKVTKTLSDNSENIDATLHSMKQLMKNSAKASEQLPTIMHQLQDTLANIKITARQF 237
Query: 240 NQILENIQVSSNNFVKSSDQV-INTVHDVRETTQTFQEVGQKIDHLLSDFS 289
++ I+++ + + + + V++ + L +
Sbjct: 238 DRAGHGIELTVGDAHTAMQSMSTQILPTVQQLLTKLNATAAHLQQLSIELQ 288
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 60/167 (35%), Gaps = 9/167 (5%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ + + + +N ++++ + + ++D + I +T++
Sbjct: 141 LMKLSTALQEVTKTIKELSDNVGKVFDEKNRRAISASLVNIQKVTKTLSDNSENIDATLH 200
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+++ + N +S++ +M ++ + + F I +
Sbjct: 201 SMKQLMKNSAKASEQLPTIMHQL---------QDTLANIKITARQFDRAGHGIELTVGDA 251
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+Q+ S L +Q L+ KL T H + NP +V G+
Sbjct: 252 HTAMQSMSTQILPTVQQLLTKLNATAAHLQQLSIELQHNPSMLVRGK 298
>gi|92116873|ref|YP_576602.1| hypothetical protein Nham_1317 [Nitrobacter hamburgensis X14]
gi|91799767|gb|ABE62142.1| Mammalian cell entry related protein [Nitrobacter hamburgensis X14]
Length = 293
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 106/288 (36%), Gaps = 18/288 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +G F ++++ +F + W + + + I GS GL SV F
Sbjct: 1 METRANFVLIGSFTLAVIAAAFGFVLWFQNLHS-SKARSPLRIVFEGSASGLRNGGSVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG +V + LD P +A ++ P+ T + QGL G+ I L
Sbjct: 60 NGIRVGEVVSVKLD--DPRRVVALTMVENAAPIRKDTRVGLEFQGLTGVAAISLKGGEVA 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + +TA P+G+ + T + ++ + ++N + + T
Sbjct: 118 ASPV---PLDGDGVPTLTADPAGLRDVTESIRATLQNVNRVVAENETAVKNTLRNVETFT 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A++ + + + + +++M +T + + +
Sbjct: 175 ASLAHNAGKIDDLVQKFNEVMSKAD------------GVMTKTDELMLGLNAIAGGKDGG 222
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++L+ ++ + + + D R T +D +
Sbjct: 223 ELLKTVKSVREFADDFNKRSGALMVDGRRTLGDISRAVNNLDRNPTRL 270
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 59/174 (33%), Gaps = 23/174 (13%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
T + + + +++ EN + +R+ + + KI
Sbjct: 128 VPTLTADPAGLRDVTESIRATLQNVN-RVVAENETAVKNTLRNVETFTASLAHNAGKIDD 186
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ + S + K ELM +N I+ K+ L + + + R+ ++ N+
Sbjct: 187 LVQKFNEVMSKADGVMTKTDELMLGLNAIAGGKDGGELL----KTVKSVREFADDFNKRS 242
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
L+ + T+ +NN +RNP +++G GS
Sbjct: 243 G------------------ALMVDGRRTLGDISRAVNNLDRNPTRLLFGPSLGS 278
>gi|77463400|ref|YP_352904.1| ABC transporter periplasmic substrate-binding protein [Rhodobacter
sphaeroides 2.4.1]
gi|77387818|gb|ABA79003.1| Putative ABC transporter, periplasmic substrate-binding protein
[Rhodobacter sphaeroides 2.4.1]
Length = 321
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G+F ++ + + + WL++ Q D AE I SV+GL S VR+
Sbjct: 1 METRARYVLIGIFTLASILATLGFLLWLAKV-QLDRTYAEYDILFT-SVEGLGRASPVRY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG ++ + +D E P+ + + TP+ T A + +QG+ G++Y+ LS
Sbjct: 59 NGVDVGEVLNIAVDAEDPSLVRVRIQLAATTPVRTDTKAQVASQGVTGVSYVSLSGGAAP 118
Query: 121 KKTIFQIATER 131
+ +
Sbjct: 119 EPLTAEGDQWP 129
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 58/201 (28%), Gaps = 16/201 (7%)
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + + L +D + + N + S +
Sbjct: 121 LTAEGDQWPPVIPSERSAVQALTADAPTLLAEAIALLKDIQTFTGPENRAAVESILTNAD 180
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL-----KENNSLFKDAQRAMH 377
Q I + TS LND + + + + + A +E A+
Sbjct: 181 ASVQNIAAITRDAAEATSRLNDFTARLDAMADRADVALASLETALEEGKGAAASARDTFE 240
Query: 378 TFRDTSE--------KINRYIPSIGNNLQ---NFSQSGLNDIQNLVRKLQETVNHFDDCL 426
+ +I + I ++ NF+ +GL L + + TV + + +
Sbjct: 241 AVNRVVDRDVPPMIAQIRSAVSGIERSVAGIRNFADNGLPQYATLAAETRRTVTNLNSLI 300
Query: 427 NNFERNPQDIVWGREKGSVKI 447
R+P G + S +
Sbjct: 301 AQISRDPARFFLGSQTPSYRR 321
>gi|90422965|ref|YP_531335.1| hypothetical protein RPC_1454 [Rhodopseudomonas palustris BisB18]
gi|90104979|gb|ABD87016.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB18]
Length = 289
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 40/208 (19%), Positives = 87/208 (41%), Gaps = 6/208 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G FV++++ + + W + + I GS GL +V F
Sbjct: 1 METRANYFLIGSFVLAVIVAALGFVLWFQSLHTTKTRS-PLRIIFEGSASGLRNGGNVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ +G ++ + LD P +A A++ P+ T + QGL G+ I L ++
Sbjct: 60 NGVRIGEVISVKLD--NPRRVVALAMVENSAPIRKDTLVGLEFQGLTGVAAISLKGGQET 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + M+TA P+ + T K ++ ++ + + + T
Sbjct: 118 APPV---PLDEDGTPMLTADPAALQDVTEAIRATLKNVNRIFADNEEAVRTSLQNVQTFT 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTP 208
+++ + S + + + D ++ T
Sbjct: 175 SSLASSSEHIDSIMKKADGVITKTDNLM 202
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 55/138 (39%), Gaps = 22/138 (15%)
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
N + ++++ + + S+ I++I + K LM ++ ++ K+ L
Sbjct: 158 DNEEAVRTSLQNVQTFTSSLASSSEHIDSIMKKADGVITKTDNLMLGLDALAGGKDGGEL 217
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+A+ +FR+ ++ +++ L+ + T+ +NN
Sbjct: 218 L----QAVKSFRELTDNLDKRAG------------------ALMLDGRRTLADISRAVNN 255
Query: 429 FERNPQDIVWGREKGSVK 446
++NP I++G + +
Sbjct: 256 LDKNPTRILFGPSTSASE 273
>gi|197120796|ref|YP_002132747.1| hypothetical protein AnaeK_0376 [Anaeromyxobacter sp. K]
gi|196170645|gb|ACG71618.1| Mammalian cell entry related domain protein [Anaeromyxobacter sp.
K]
Length = 295
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 55/131 (41%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG FVV + + WL+ + I R SV GL + V F
Sbjct: 1 MRAQPNLAVVGAFVVGLGAAAIVVGLWLAAGGFHLKRQERYIARFEESVSGLGRGAPVSF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + L L+ P + P TP+ T A + QGL GI +ELS +
Sbjct: 61 RGVPVGSVRDLSLEPGDPARVRLVLEVAPGTPVTRDTVAVLAFQGLTGIASVELSGGGRG 120
Query: 121 KKTIFQIATER 131
+ + A +
Sbjct: 121 APPLARAAGDP 131
>gi|302039181|ref|YP_003799503.1| putative ABC transporter periplasmic-binding protein [Candidatus
Nitrospira defluvii]
gi|300607245|emb|CBK43578.1| putative ABC-type transport system, periplasmic binding component
[Candidatus Nitrospira defluvii]
Length = 320
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME K Y VG FVV + +I+WL ++ Y G + SV GLS DS+V++
Sbjct: 1 MEPKVNYILVGAFVVLLGATILGAIFWLGKT-DYRGIYDRYYVYTRESVAGLSVDSTVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L+ E I TP+ T A + TQGL G+ + L+ +E
Sbjct: 60 RGVDVGRVKQVILNPENTEEVRVTLDIVGGTPVKTDTQAVLVTQGLTGLVTLNLTGGSRE 119
Query: 121 KKTIFQIA 128
+ IA
Sbjct: 120 APFLTPIA 127
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/164 (11%), Positives = 60/164 (36%), Gaps = 5/164 (3%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ L+++ + ++ ++ +N ++ + + + ++ ++ +
Sbjct: 157 LSTLVANLNGLAQNAASALDEDNRTVLRQILKDVSAVTKVLAERSGQMDRGVQQAVQAAD 216
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+++ ++ + + ++ + Q+ TS + I + ++ F
Sbjct: 217 QSARVTEQLSKQLPAL-----VERLSRSAAGLQQMTEDLSRTSRSVGEMIGASRPGIEQF 271
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
S+ L D LV +L++ + ER P +V GR
Sbjct: 272 SRQTLADTGLLVTELRQLTATLNRVAQQVERQPNVLVLGRSAQP 315
>gi|126462255|ref|YP_001043369.1| hypothetical protein Rsph17029_1487 [Rhodobacter sphaeroides ATCC
17029]
gi|126103919|gb|ABN76597.1| Mammalian cell entry related domain protein [Rhodobacter
sphaeroides ATCC 17029]
Length = 321
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 2/131 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G+F ++ + + + WL++ Q D AE I SV+GL S VR+
Sbjct: 1 METRARYVLIGIFTLASILATLGFLLWLAKV-QLDRTYAEYDILFT-SVEGLGRASPVRY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG ++ + +D E P+ + + TP+ T A + +QG+ G++Y+ LS
Sbjct: 59 NGVDVGEVLNIAVDAEDPSLVRVRIQLAATTPVRTDTKAQVASQGVTGVSYVSLSGGAAP 118
Query: 121 KKTIFQIATER 131
+ +
Sbjct: 119 EPLTAEGDQWP 129
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 58/201 (28%), Gaps = 16/201 (7%)
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + + L +D + + + N + S +
Sbjct: 121 LTAEGDQWPPVIPSERSAVQALTADAPTLLAEAISLLKDIQTFTGPENRAAVESILTNAD 180
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL-----KENNSLFKDAQRAMH 377
Q I + TS LND + + + + + A +E A+
Sbjct: 181 ASVQNIAAITRDAAEATSRLNDFTARLDAMADRADVALASLETALEEGKGAAASARDTFE 240
Query: 378 TFRDTSE--------KINRYIPSIGNNLQ---NFSQSGLNDIQNLVRKLQETVNHFDDCL 426
+I + I ++ NF+ +GL L + + TV + + +
Sbjct: 241 AVNRVVNRDVPPMIAQIRSAVSGIERSVAGIRNFADNGLPQYATLAAETRRTVTNLNSLI 300
Query: 427 NNFERNPQDIVWGREKGSVKI 447
R+P G + S +
Sbjct: 301 AQISRDPARFFLGNQTPSYRR 321
>gi|82703104|ref|YP_412670.1| hypothetical protein Nmul_A1983 [Nitrosospira multiformis ATCC
25196]
gi|82411169|gb|ABB75278.1| Mammalian cell entry related protein [Nitrosospira multiformis ATCC
25196]
Length = 301
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/295 (16%), Positives = 111/295 (37%), Gaps = 16/295 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + + GLFV+ + ++ W ++ V GL++ + VR+
Sbjct: 1 MENRAHALAAGLFVIILGTALVAAVLWFGGDTMMRNK---YMLVSEMPVSGLNSQAIVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD+E P+ L + + + PL + A + QGL G+ Y++L+ E
Sbjct: 58 RGVTVGKVENIKLDKEDPHKILIQIAVDKNVPLTRNAFAQLGYQGLTGLAYVQLNDEDGE 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T+ ++ I PS + S+ ++ S + ++E+ +
Sbjct: 118 TEQLE---TDSDEPPQIPLRPSLFDSITSSGQHLLGTASVLIERMNLLLEDENRT----- 169
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ N + + +DL ++
Sbjct: 170 -----RFMHILENTEKATGRLSRVLNQLEPGLKAIPGLAADASSVMKNADQLVVDLNQIT 224
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
L + + ++ ++ T+ +RE T+ + + +D +L + S
Sbjct: 225 SRLNRQGGAIDGLSVATVELGETMRSLREATEGIKNTTRSVDRVLLQLEDQPTSL 279
>gi|212212805|ref|YP_002303741.1| hypothetical protein CbuG_1274 [Coxiella burnetii CbuG_Q212]
gi|212011215|gb|ACJ18596.1| hypothetical exported protein [Coxiella burnetii CbuG_Q212]
Length = 308
Score = 110 bits (273), Expect = 5e-22, Method: Composition-based stats.
Identities = 55/291 (18%), Positives = 124/291 (42%), Gaps = 5/291 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K YT VG F++ + S W S + + + V G++T + VRF
Sbjct: 1 MDTKVNYTLVGFFIILLGAASIVIFLWFSTFRHRQTFDTYL-VYMHEEVSGINTQTPVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + ++ P + I+ +TP+ ST AT+R++G+ G Y+ L L
Sbjct: 60 NGVKVGYVQKIEINPADPQQVVLTLKIKHETPITTSTVATLRSEGIMGTDYVALKALTAT 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN-IEKPLTTT 179
+ IA + +I + PS + + + +K I + S ++ K+ + + ++ +
Sbjct: 120 APPL--IAKPGEKYPVIPSEPSLLMKLSTALQEVTKTIKELSDNVGKVFDEKNRRAISAS 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ NI+ ++ L++N +ID +H+ + +S + I ++
Sbjct: 178 LVNIQKVTKTLSDNSENIDATLHSMKQLMKNSAKASEQLPTIMHQLQDTLANIKITARQF 237
Query: 240 NQILENIQVSSNNFVKSSDQV-INTVHDVRETTQTFQEVGQKIDHLLSDFS 289
++ I+++ + + + + V++ + L +
Sbjct: 238 DRAGHGIELTVGDAHTAMQSMSTQILPTVQQLLTKLNATAAHLQQLSIELQ 288
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 60/167 (35%), Gaps = 9/167 (5%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ + + + +N ++++ + + ++D + I +T++
Sbjct: 141 LMKLSTALQEVTKTIKELSDNVGKVFDEKNRRAISASLVNIQKVTKTLSDNSENIDATLH 200
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+++ + N +S++ +M ++ + + F I +
Sbjct: 201 SMKQLMKNSAKASEQLPTIMHQL---------QDTLANIKITARQFDRAGHGIELTVGDA 251
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+Q+ S L +Q L+ KL T H + NP +V G+
Sbjct: 252 HTAMQSMSTQILPTVQQLLTKLNATAAHLQQLSIELQHNPSMLVRGK 298
>gi|304319771|ref|YP_003853414.1| hypothetical protein PB2503_00962 [Parvularcula bermudensis
HTCC2503]
gi|303298674|gb|ADM08273.1| hypothetical protein PB2503_00962 [Parvularcula bermudensis
HTCC2503]
Length = 310
Score = 110 bits (272), Expect = 6e-22, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ +Y +G F++ + + WL + E I + GL ++V F
Sbjct: 1 METRAHYVLIGAFMLGGIVLTVLFTLWLGSAR---SEYDEYRIIFTQKISGLQEGANVLF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGIPVG + L LDQE PN SLA + TP+ T + G+ G+ I+ + E
Sbjct: 58 NGIPVGEVASLELDQENPNRSLALVRVDQGTPVKTDTGVELELAGVTGLAVIQFTGGSPE 117
Query: 121 KKTIFQIATER 131
+ ++ ER
Sbjct: 118 APLLQNVSPER 128
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 63/183 (34%), Gaps = 8/183 (4%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
T + +L + + N + S D+ +I
Sbjct: 129 IPTIDANLGGVAAVLESSGELALNLQRLISQRNAEAVGRVLADVESLTDIFADRENEIGL 188
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
I+ +++ + +++ + ++++ + A E + D ++A F D + + I
Sbjct: 189 IIDNAAAVSTEMRVAAENISAASARLDAVLADVETV-VDGDVRQATEAFADAAVDLQELI 247
Query: 391 PSIGNNLQN-------FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ L+ F++ GL +V K V+ L F+RNP G +
Sbjct: 248 VEMREVLEENRGAIRSFTREGLGAAVAMVNKASRLVDTTQAILLEFDRNPAAFFVGEGRP 307
Query: 444 SVK 446
+ +
Sbjct: 308 TAR 310
>gi|315498541|ref|YP_004087345.1| mammalian cell entry related domain protein [Asticcacaulis
excentricus CB 48]
gi|315416553|gb|ADU13194.1| Mammalian cell entry related domain protein [Asticcacaulis
excentricus CB 48]
Length = 320
Score = 110 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 48/296 (16%), Positives = 109/296 (36%), Gaps = 4/296 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + +Y VGL + + +F +WL ++ +E + SV+GL+ V F
Sbjct: 1 MERQAHYAVVGLITLVLTAAAFVFAFWL-IQGSFNETYSEYDVVFNSSVNGLTEGGEVHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L + +A + TP+ +TA + G+ G+ YI++S KE
Sbjct: 60 NGIKVGEVKELRLGKANTAQVIATVRVDSSTPVRVDSTAVLEPLGVTGLNYIQISPGSKE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII-ENIEKPLTTT 179
+ + + +I AT S ++ ++ + + +S I +++ ++ + T
Sbjct: 120 AALLKREPGIGARNPIIRATESRLDKLLAGSGGVIESAYESLNRINRLMSDDNLNAFSKT 179
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ NIE I++ + + + + + + ++ + +
Sbjct: 180 MKNIEDITSDIGEVTEDLKQRKQLLDDAHEAIVQAGIAAENLSKLANSADVLVKDRVPQT 239
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQT--FQEVGQKIDHLLSDFSSKMK 293
+++ + + + + +L S
Sbjct: 240 MNRIDDAAAKLADAATEVANLSKVAQGPINEVSETTLPALSDSLRNLNQATRSVED 295
>gi|114570552|ref|YP_757232.1| hypothetical protein Mmar10_2002 [Maricaulis maris MCS10]
gi|114341014|gb|ABI66294.1| Mammalian cell entry related domain protein [Maricaulis maris
MCS10]
Length = 316
Score = 110 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K ++ VGLF V +L F WL + + +D A I G V GL VRF
Sbjct: 1 METKAHHALVGLFAVLLLAAGGFFALWLGKVS-FDEDYAFYDIVFDGPVRGLRESGEVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + +A+ + TP+ ++ A + QGL G++Y+ ++ +
Sbjct: 60 NGIQVGEVTELELD--DQSRVIARIRVLAQTPVRTNSEAQLEPQGLTGLSYVLITGGTPD 117
Query: 121 KKTIFQIATERNQRAM 136
+ + A R
Sbjct: 118 AQRLESPANRPVPRIF 133
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 68/203 (33%), Gaps = 9/203 (4%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ +++ L+ + + +T+ F S N+
Sbjct: 111 ITGGTPDAQRLESPANRPVPRIFARRAQLEGLVEGSEDVLDAAQTALFRLTALLSEQNVG 170
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + + + ++ I ++ + L +++ + ++ + F D
Sbjct: 171 EVSATLTNLREITDRLSEEEALIADMRNTLAGIDTAASDMSAAAMSLQEFGVTATAFLDN 230
Query: 373 QRAMHTFRDTSE---------KINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ + T T N+ + ++ +++ + SG+ D+ + L+ V +
Sbjct: 231 EMTLATNETTLAAMAVNQAAADTNQIVLTLQPAIESLADSGVEDLNRTLSDLRRVVASLE 290
Query: 424 DCLNNFERNPQDIVWGREKGSVK 446
+ E NP + G + +V+
Sbjct: 291 RITSEVESNPGGFIAGAPRETVE 313
>gi|126656905|ref|ZP_01728083.1| hypothetical protein CY0110_01964 [Cyanothece sp. CCY0110]
gi|126621743|gb|EAZ92452.1| hypothetical protein CY0110_01964 [Cyanothece sp. CCY0110]
Length = 458
Score = 110 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 51/437 (11%), Positives = 121/437 (27%), Gaps = 46/437 (10%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF + L + WL + V GL + VR+ G+ VG+I+
Sbjct: 12 VGLFALFGLIIFGGLVVWLRG-GIIGQKTYQFFAEFKD-VSGLQIGAPVRYRGVAVGKIL 69
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
GL I + + I GL G ++++ R+ + I
Sbjct: 70 GLQPSSNG---VTVAVEISSAQLRIPKGSEVQINRYGLIGEASVDITPSRELSEDALSID 126
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + E + +
Sbjct: 127 PTSEDCEQAGKILCNNDQVMGQTGSQLVEALTRLSNAYSDPEFVGNMNAALQNVAKAGGK 186
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
V + T SD + + + L + + + + + +
Sbjct: 187 VATLSEEVTKLSKATRGEIGGVSDVLRSADQAAQDASQLMRNVNTVVAENRTDLNRTVSS 246
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
++N V ++ T + Q ++ L +F++ + ++A
Sbjct: 247 AANLISNLDGLVSENRGNIVNTLDSIQRTSDQVRFLALNFNTTVDRLNEGIDEIDMA--- 303
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ ++L A+ + N+S + +
Sbjct: 304 ----------------------------KLANDLETLMTNAAQTSENLQNLSQSLNDPEV 335
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + + R T E + + + +++ ++ + +
Sbjct: 336 LLTIQKTLDSARVTFENTQKITSDVEELTGD---------PTFRNNIRKLIDGLSNLVAY 386
Query: 429 FERNPQDIVWGREKGSV 445
E+ Q + G+ SV
Sbjct: 387 TEQLEQQVYVGQVIESV 403
>gi|258404806|ref|YP_003197548.1| Mammalian cell entry related domain-containing protein
[Desulfohalobium retbaense DSM 5692]
gi|257797033|gb|ACV67970.1| Mammalian cell entry related domain protein [Desulfohalobium
retbaense DSM 5692]
Length = 529
Score = 110 bits (272), Expect = 7e-22, Method: Composition-based stats.
Identities = 52/368 (14%), Positives = 117/368 (31%), Gaps = 9/368 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
K VG+FV L + + + D +V + +V GL + V GI
Sbjct: 5 KGAEIKVGIFVCIALVALGYMSMQVGQGLFVDKDTKKVSV-FFDNVSGLKQGAPVEIAGI 63
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + L + + + A IRT+G+ G ++EL E
Sbjct: 64 EVGQVHSIGLA---DGRAELTLALDKGIAVPVDVKAVIRTRGVLGDKFVELRGGSPEMPN 120
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ E QR +++P+ ++ + ++ IS S+ + + +
Sbjct: 121 L-----EEGQRITRSSSPADLDQLLQKVGQIAEDISTVSQSVSNVFGGEQGEAQLQTIMD 175
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ N ++ + +T + +
Sbjct: 176 NVRELTVTLNGLVQQNAESVERIVANLDGFTADMREMTARNKDQINDAVSDLGAFAANMR 235
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
E + + + + ++ T Q Q+V K+D + + +E + L+
Sbjct: 236 EITGENKDGIQRIVTNLDRASGKLQTTMQAMQDVLGKVDEGQGTLGTMVNDEEMAYDLKK 295
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
S ++ I R + +T ++ +N K + + ++ S
Sbjct: 296 TMASLESVSRKIDEGRGTLGKLVNDDTTGKELDKALEGVNTFLAKQEQFKTSVDFTSEYL 355
Query: 364 ENNSLFKD 371
++ K
Sbjct: 356 ADSGDMKS 363
>gi|182680398|ref|YP_001834544.1| hypothetical protein Bind_3498 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636281|gb|ACB97055.1| Mammalian cell entry related domain protein [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 378
Score = 109 bits (271), Expect = 8e-22, Method: Composition-based stats.
Identities = 67/379 (17%), Positives = 123/379 (32%), Gaps = 11/379 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+ Y VGLF ++++ F W S +R G V GL T S+V+F
Sbjct: 1 METTARYLWVGLFSLAVIAAGFILYLWSHNSGGLAKHSY-YQVRFAGPVSGLQTGSTVQF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD P+ A I P TP+ T I QGL G I LS
Sbjct: 60 NGIRVGEVTALALDARDPSSLTATIAIAPGTPVRSDTKIDINFQGLLGTPAIALSGGTLT 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ T P + ++ ++ + +HI KI+++ L T+
Sbjct: 120 APELHGSET----------QPPLLRADALTGQDLTQAARAALQHINKILDDNADSLKGTL 169
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N++T + VLA N DK++ +T +
Sbjct: 170 GNLKTFTDVLARNTGDFDKIIAGLVKLAGGGPEAKPKPVYDLTVTQATPAPAPKGKKLGQ 229
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++ + + + + + K+ S + + S
Sbjct: 230 IVIAEPTTTVVFDTQRLLARSKDGEFTPQGEMQWADSIPKLVQEKMVQSFENEGLIGSVT 289
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ + +T + +++ + + + K + + +
Sbjct: 290 APVEGVTRQYQLLTDIRNFAVTSDSRPSADVELSVKLMNEEGHVIAGKIFHVTVPVESED 349
Query: 361 ALKENNSLFKDAQRAMHTF 379
K + + +AM
Sbjct: 350 TSKVVAAFSQAFNQAMTEL 368
>gi|295677862|ref|YP_003606386.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1002]
gi|295437705|gb|ADG16875.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1002]
Length = 202
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 41/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL + V+
Sbjct: 24 MKKNVLDFWVGLFVVLGFVALLFLALKVGNMSSLSFQATYPVKLKFDNIGGLKPRAPVKS 83
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D +L I T+A I T GL G YI L
Sbjct: 84 AGVTVGRVASIGFDSNTY-QALVTIDIDKQFEFPRDTSAKILTSGLLGEQYIGLEPG 139
>gi|146277757|ref|YP_001167916.1| hypothetical protein Rsph17025_1718 [Rhodobacter sphaeroides ATCC
17025]
gi|145555998|gb|ABP70611.1| Mammalian cell entry related domain protein [Rhodobacter
sphaeroides ATCC 17025]
Length = 321
Score = 109 bits (271), Expect = 9e-22, Method: Composition-based stats.
Identities = 50/326 (15%), Positives = 111/326 (34%), Gaps = 7/326 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G+F + + + + WL++ D AE I SV+GL S VR+
Sbjct: 1 METRARYVLIGIFTLLSILATLGFLLWLAKVE-LDRTYAEYDILFT-SVEGLGRASPVRY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG ++ + +D+E + + + TP+ T A + +QG+ G++Y+ LS
Sbjct: 59 NGVDVGEVLTIEVDEEDSSLVRVRIQLAATTPVRTDTRAQVASQGVTGVSYVALSGGAAP 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A E +I + S + ++A + + IQ + +I
Sbjct: 119 EPL---QAEEGQWPPVIPSERSAVQALTADAPTLLAEAIALLKDIQTFTGPENRAAVESI 175
Query: 181 ANIETISTVLAN--NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
S + T + + + + +
Sbjct: 176 LTNADASVQNIAAITRDASEATARLNDFTARLDTMADRAEEALATLETALEEGQGAASAA 235
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ +V + Q+ + V + ++ + + +++ + T+
Sbjct: 236 RDTFESVNRVVDQDVPPMLAQIRSAVAGIEQSVAGIRNFADNGLPQYASLAAETRRTVTN 295
Query: 299 AFLENIADSTSNMRSSISAIREITDQ 324
S R + +
Sbjct: 296 FNSLIAQISRDPARFFLGNQTPSYRR 321
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 60/201 (29%), Gaps = 16/201 (7%)
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + + L +D + + N + S +
Sbjct: 121 LQAEEGQWPPVIPSERSAVQALTADAPTLLAEAIALLKDIQTFTGPENRAAVESILTNAD 180
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL-----KENNSLFKDAQRAMH 377
Q I + T+ LND + + + + A +E A+
Sbjct: 181 ASVQNIAAITRDASEATARLNDFTARLDTMADRAEEALATLETALEEGQGAASAARDTFE 240
Query: 378 TFRDTSEK--------INRYIPSIGNNLQ---NFSQSGLNDIQNLVRKLQETVNHFDDCL 426
+ ++ I + I ++ NF+ +GL +L + + TV +F+ +
Sbjct: 241 SVNRVVDQDVPPMLAQIRSAVAGIEQSVAGIRNFADNGLPQYASLAAETRRTVTNFNSLI 300
Query: 427 NNFERNPQDIVWGREKGSVKI 447
R+P G + S +
Sbjct: 301 AQISRDPARFFLGNQTPSYRR 321
>gi|78222006|ref|YP_383753.1| virulence factor MCE-like protein-related protein [Geobacter
metallireducens GS-15]
gi|78193261|gb|ABB31028.1| Mammalian cell entry-related protein [Geobacter metallireducens
GS-15]
Length = 150
Score = 109 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 1/133 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV + + L + G EV SV GL ++V
Sbjct: 1 MKKVTLELIVGIFVAIGILCLGWLSVKLGKMELVGGDHYEVYAEF-DSVSGLKEGAAVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD ++ + + I L A++RT G+ G +I L +
Sbjct: 60 AGVEVGRVDRIALDPKFNDRARVSMRIANGVKLQDDVIASVRTSGIIGDKFILLKPGGSD 119
Query: 121 KKTIFQIATERNQ 133
+
Sbjct: 120 NFLADNGRIRETE 132
>gi|78357342|ref|YP_388791.1| putative ABC transport system substrate-binding protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
gi|78219747|gb|ABB39096.1| putative ABC transport system substrate-binding protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 148
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M TSVG+FV+ L + L + + V R SV GL + V
Sbjct: 1 MNKYTKETSVGIFVLIGLLCLGYVTVKLGKMEVFSSEGYTVQARFT-SVTGLRVGADVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+PVG++ G+ LD + N ++ +RPD L T A+++T GL G Y++LS
Sbjct: 60 SGVPVGKVSGINLD-QMDNVAVVSLRLRPDVELSEDTIASVKTSGLIGDKYVKLSPGGAM 118
>gi|163793379|ref|ZP_02187354.1| hypothetical protein BAL199_02689 [alpha proteobacterium BAL199]
gi|159181181|gb|EDP65696.1| hypothetical protein BAL199_02689 [alpha proteobacterium BAL199]
Length = 335
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 58/305 (19%), Positives = 119/305 (39%), Gaps = 5/305 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y VG FV+++ W + D + + +I GSV GLS S VR+
Sbjct: 1 METRAGYAVVGAFVLALFLGGLGLAVWFGNV-RLDQDVRDYLIEFDGSVGGLSVGSRVRY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+PVG + + +D + + P+ + AT+ +QGL G+ +I++ ++
Sbjct: 60 HGVPVGSVTDIRIDPDNVEKVAVTVELDAAIPIKVNMYATLESQGLTGLGFIQIQGGTRD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ-KIIENIEKPLTTT 179
+ E +I + S + +A + ++ H+Q + ++ +K +
Sbjct: 120 APNLQVA--EAGTLPLIPSRASRLEKVFQSAPEIAGQLVTLIAHLQGFLSDDNQKSVRDI 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN-TFNTITDLITSLDKMIKAIDLQK 238
+ N+ T+S VLA I+ + + + + K I
Sbjct: 178 LRNLATVSAVLAQRTDEIETAVVDGAAAATEVRAAMADLTPLIKELRGNFKTITEEVSVT 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
++ + K SD++ T + T + + + + DFS+ + T
Sbjct: 238 LSAARGTVTGVDAEIGKLSDRLAFTTERIGGTAAQLEALLGEARPGMRDFSNSGLYELTQ 297
Query: 299 AFLEN 303
E
Sbjct: 298 FLFEA 302
Score = 63.0 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/213 (11%), Positives = 67/213 (31%), Gaps = 6/213 (2%)
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + + ++ E + + LSD + K
Sbjct: 121 PNLQVAEAGTLPLIPSRASRLEKVFQSAPEIAGQLVTLIAHLQGFLSDDNQKSVRDILRN 180
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIE----NITSNLNDSSQKFAELMSK 355
A +A+ + ++ + + + + N +++ + +S
Sbjct: 181 LATVSAVLAQRTDEIETAVVDGAAAATEVRAAMADLTPLIKELRGNFKTITEEVSVTLSA 240
Query: 356 INNISA--LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
E L T+ ++ + +++FS SGL ++ +
Sbjct: 241 ARGTVTGVDAEIGKLSDRLAFTTERIGGTAAQLEALLGEARPGMRDFSNSGLYELTQFLF 300
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ +E V + D + R+P ++G+ +G V+
Sbjct: 301 EARELVGNLDRVVRQLNRDPSQFLFGKREGQVE 333
>gi|172037582|ref|YP_001804083.1| hypothetical protein cce_2669 [Cyanothece sp. ATCC 51142]
gi|171699036|gb|ACB52017.1| unknown [Cyanothece sp. ATCC 51142]
Length = 455
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/439 (11%), Positives = 122/439 (27%), Gaps = 46/439 (10%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF + L + WL + V GL + VR+ G+ VG+I+
Sbjct: 12 VGLFALFGLIIFGGLVVWLRG-GIIGQKTYQFFAEFKD-VSGLQIGAPVRYRGVAVGKIL 69
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
GL I + + I GL G ++++ R+ + I
Sbjct: 70 GLQPSSNG---VTVAVEISSAQLRIPKGSKVQINRYGLIGEASVDITPSRELSEDALSID 126
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + E + +
Sbjct: 127 PTSEDCEQAGKILCNNDQVMGQTGSQLVEALTRLSNAYSDPEFVGNMNAALQNVAKAGGK 186
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
V + T SD + + + L + + + + + ++
Sbjct: 187 VATLSEEVTKLSKATRGEIGGVSDVLRSADQAAQDASQLMRNVNTVVAENRTDLNRTVRS 246
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
++N V ++ T + + ++ L +F++ + ++A
Sbjct: 247 AANLMSNLDGLVSENRGNIVNTLDSIERTSDQVRLLALNFNTTVDRVNEGIDEIDMA--- 303
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ ++L A+ + N+S + +
Sbjct: 304 ----------------------------KLANDLETLMSNAAQTSENLQNLSQSLNDPEV 335
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + + R T E + + + +++ ++ + +
Sbjct: 336 LLTIQKTLDSARVTFENTQKITSDVEELTGD---------PTFRNNIRKLIDGLSNLVAY 386
Query: 429 FERNPQDIVWGREKGSVKI 447
E+ Q I G+ SV
Sbjct: 387 TEQLEQQIYVGQVIESVTE 405
>gi|218885957|ref|YP_002435278.1| hypothetical protein DvMF_0854 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756911|gb|ACL07810.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 148
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 2/122 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + TSVG+FV+ L + L R V R S+ GL + V
Sbjct: 1 MKKYSRETSVGIFVLIGLLCVGYLTIKLGRMELLSDKGYTVHARFT-SITGLRVGAEVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVGR+ G+ L + P ++ +R L A+++T GL G YI+LS
Sbjct: 60 AGVPVGRVAGINLAPDKP-VAVVSLRMREGVHLTDDVIASVKTSGLIGDKYIKLSPGGSP 118
Query: 121 KK 122
+
Sbjct: 119 DQ 120
>gi|168700260|ref|ZP_02732537.1| hypothetical protein GobsU_12080 [Gemmata obscuriglobus UQM 2246]
Length = 504
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 53/473 (11%), Positives = 139/473 (29%), Gaps = 34/473 (7%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GLF+ + L + + + + + GL + +R +G+ +G++
Sbjct: 2 RLGLFMGASLLALAGLVVLFGGTPRVFSSDVKYSVLFSE-APGLGPGTPIRKSGVRIGQV 60
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI-TYIELSTLRKEKKTIFQI 127
G+ LD E + + S A I L+G L L + + + +
Sbjct: 61 TGVELDPES-GQVRVRIELDRKYLPRKSEEAHITRGLLSGDTAVDFLPKLGPDSQPVPRG 119
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ TP ++ A N + S + K E +E+ + IE +
Sbjct: 120 EDWPPGSEIPGVTPITPRSLVAPASNALQNAQQSLERMTKAFEKLERL-SEVGPRIEATA 178
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ + + T + + I + +
Sbjct: 179 DEATALFKDVRAFIPELRKTNAKIQNILGPDGPVPPKGPPAPGAAPIGAELPVGFVSTQP 238
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ +R +V + L + ++ +K T+ N S
Sbjct: 239 PLVPEEPNLKTLFRDAQDALRTIKPAVDDVRAAVKRLEPEVAAAVKGARTAFDNVNDVLS 298
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL--KEN 365
N + ++ + ++ + + + + + + ++++ + A
Sbjct: 299 PENRKQFAELLKNLNSVALNVVKFAGALGTLLDSAEKTVKNIDDRVTEVGQVVADVRAVT 358
Query: 366 NSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS-------------------GLN 406
L ++ + +++E++ + I I + F +
Sbjct: 359 RPLAARSEGLVKGVAESAEQLGKLIAEIRGIVNAFGKENGTVQKLISDPTVYQNLDLAAG 418
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR---------EKGSVKIYKP 450
+ ++ + ++ + + R P+ I G E Y+P
Sbjct: 419 SLARILARSEKITRDLEVFADKVARRPELIGVGGALRGSGGLKELPGTPSYRP 471
>gi|254411405|ref|ZP_05025182.1| mce related protein [Microcoleus chthonoplastes PCC 7420]
gi|196181906|gb|EDX76893.1| mce related protein [Microcoleus chthonoplastes PCC 7420]
Length = 469
Score = 109 bits (270), Expect = 1e-21, Method: Composition-based stats.
Identities = 66/438 (15%), Positives = 151/438 (34%), Gaps = 38/438 (8%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ SVGL ++ L W+ ++ ++ P +V G+ ++VR
Sbjct: 1 MRSRTIREGSVGLLILVGLAVFAGLAIWIRGL-KFGNRSYSFVVNFP-NVAGMKEGATVR 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VG I + I D + GL G T ++++ LR
Sbjct: 59 YRGVDVGNITDIEATTNG---VDVTIEIASEDLVIPEDVAIEANQSGLIGETSVDITPLR 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ I + +++ SG + + + ++ R + +
Sbjct: 116 EVSSNIQSMNPLKSECNSDVIICSGEQIEGEIGVSFIELLRNTERLTTIYTDPLFFNNIN 175
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++A +++ ++ ++ + S+ + T + ++ D
Sbjct: 176 SLAQNASLAASGIAQLAGELSLLSRSVRQEVGGFSQASDAITTAATQTTQRIGDTADQFS 235
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ N ++D V + T + + +++ LLSD +++ T+
Sbjct: 236 QTAVQLN-----RLIASTNDLVTRNRAVLVGTLTSVGQTSEQLGVLLSDLRPTLENVNTT 290
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
L N +++ + I +E + NL S AEL + + +
Sbjct: 291 IDLVNTQVDQADVSTI-----------------IENVETASENLVALSANAAELSADLRD 333
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
IS ++ S Q+ + + R T E + + + + + L+E
Sbjct: 334 ISNSLDSPSTAIVLQQLLDSARVTFENTQKITSDLEDLTGD---------PAFRQNLKEL 384
Query: 419 VNHFDDCLNNFERNPQDI 436
VN + +++ E+ Q I
Sbjct: 385 VNGLSELVSSTEQLEQQI 402
>gi|91776720|ref|YP_546476.1| hypothetical protein Mfla_2368 [Methylobacillus flagellatus KT]
gi|91710707|gb|ABE50635.1| Mammalian cell entry related protein [Methylobacillus flagellatus
KT]
Length = 316
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 109/299 (36%), Gaps = 7/299 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +VG+ + ++ F+ +W+S S Q P+ E I V GL+ ++SV+F
Sbjct: 1 MENRAHALAVGIATLILVAILAFAFWWMSGSRQ---PLTEYKIISRQPVTGLNQEASVKF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD + + + L A +R+QG+ G+ YI+L+ +
Sbjct: 58 RGVNVGKVSSIALDPDSQSSIEITIRVDEKLHLTKDAYAELRSQGVTGLAYIDLNDPNDD 117
Query: 121 KKTIFQIATERNQR----AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + + P ++ S + + I ++ +Q I
Sbjct: 118 GEQLPPGSLITMRPSLIDRISERVPRLVDKVESFVNHGVETIEQANTMMQSIDVKRLNQT 177
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ + + + + + T N + + ++ +
Sbjct: 178 LSNLEEASSKLGPALVSANEAFGQATKLLSEQNQQQFTQTLNNLQAATQAATPLLNELTA 237
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + T+ + E T ++I +L +S
Sbjct: 238 TVHDVRGMTGDIRNSASLIGDTLNHETLPQLNELTANASNDARRISRILDMLEENPQSL 296
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 55/173 (31%), Gaps = 7/173 (4%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
++ + K++ ++ ++ T ++ + + A ++
Sbjct: 135 DRISERVPRLVDKVESFVNHGVETIEQANTMMQSIDVKRLNQTLSNLEEASSKLGPALVS 194
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
+ S N Q+F + ++ + A + L + +H R + I
Sbjct: 195 ANEAFGQATKLLSEQNQ--QQFTQTLNNLQA--ATQAATPLLNELTATVHDVRGMTGDIR 250
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
IG+ L L + L L+ E NPQ +++G+
Sbjct: 251 NSASLIGDTLN---HETLPQLNELTANASNDARRISRILDMLEENPQSLLFGK 300
>gi|295690464|ref|YP_003594157.1| mammalian cell entry related domain-containing protein [Caulobacter
segnis ATCC 21756]
gi|295432367|gb|ADG11539.1| Mammalian cell entry related domain protein [Caulobacter segnis
ATCC 21756]
Length = 312
Score = 108 bits (269), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/300 (16%), Positives = 105/300 (35%), Gaps = 6/300 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME Y VG +++ WL++ + + + G V GLS F
Sbjct: 1 MERNANYAVVGAVTLALFMGLIVFAVWLAKIS-FSRDYDLYDVLFVGPVRGLSQGGEAHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + + LD+ PN +A+ + D P+ + AT+ QG+ G+ YI+++
Sbjct: 60 NGIKVGEVTRIELDKSDPNRVIARIRVTSDVPIKVDSYATLEPQGITGVNYIQITAGSPN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K+ + + + + + ++ I R + + +N K + +
Sbjct: 120 KELLKDTVKGGRVPVLRSQRSALSDLLEGGGTVLTRTIEALDRVNRVLSDNNIKTFSAAL 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK-----AID 235
++++ ++ + I Q ++ S D + + D
Sbjct: 180 SDVQAVTAEMRERKEVIADAQKALQSIDQTAQSITQLANSADGVVNGDAKRTLKELGDAA 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + +SD + + T Q + +D L+ + +
Sbjct: 240 AELKAAAKDARGMVGKLEGPTSDFATTGLPQLSAAIVTLQSAAESLDRLVGEVEQNPRGA 299
>gi|307150087|ref|YP_003885471.1| Mammalian cell entry related domain-containing protein [Cyanothece
sp. PCC 7822]
gi|306980315|gb|ADN12196.1| Mammalian cell entry related domain protein [Cyanothece sp. PCC
7822]
Length = 474
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/395 (10%), Positives = 133/395 (33%), Gaps = 15/395 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF + L WL + +I+ +V GL + V++ G+ VGR+
Sbjct: 12 VGLFALLGLVIFGGITIWLRG-GNWGQTSYRLIVYF-DNVAGLQLGAPVQYRGVQVGRLT 69
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGIT---YIELSTLRKEKKTIF 125
L N A I D + + T GL G + L + +++
Sbjct: 70 ALKP---KDNQVEAILEISSTDLRIPRNVTIQTNRYGLIGEPAIDITPNAQLSPQAQSMS 126
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + NQ+ ++ + +++ + + + + +
Sbjct: 127 PLGKQCNQQLILCDNTRIQGESGGQLIESLTRLAQTYSDPEFFQNLNKAAKNANLTLKDI 186
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ + +V+ + + + + + D ++ ++ L+ + +
Sbjct: 187 SRLTKEFSNLSKTAQLEIRKVSGNFATTSASVSRTADSASNFVNNANSVLLENRQALNQA 246
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
I ++ ++ V+ + ++ + ++ L ++ + T+ N
Sbjct: 247 INNANQLVSNANQLVVENRQRISTAIESINRMSDRLTLLAANLNKTAVKINTTLDSANTE 306
Query: 306 DSTSNMRSSISAIREITDQRQKIISTINTIE------NITSNLNDSSQKFAELMSKINNI 359
++ + ++ ++ + +++ IN + + + ++ S ++ +
Sbjct: 307 KMVDDLETLLTNAAAVSKELREVSEKINDPTVILTLQQTLDSARVTFENTQKITSDVDEL 366
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
E S + + +S+++ + + ++
Sbjct: 367 VGDPEFRSNLRRLVNGLSNLVSSSQQLQKQMATVE 401
>gi|291568100|dbj|BAI90372.1| hypothetical protein [Arthrospira platensis NIES-39]
Length = 460
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/448 (10%), Positives = 140/448 (31%), Gaps = 37/448 (8%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S++ SVGL ++ + + +WL ++ P S GL VR
Sbjct: 1 MRSRSVREGSVGLLIILGVGLFGATAFWLRGL-TLGQQSYQIRAEFP-SATGLQIGVPVR 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGR+ + I D + ++ + G TY+++
Sbjct: 59 YRGVKVGRVTRIQPQSNG---VEVVLNIESTDLVMPRNSQVLVNQTGFLNETYVDIIPNA 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + S + + + +
Sbjct: 116 VLTPELVAANPISAT---------------CPSSDILCHESSIQGLPGISPDRLMETMLD 160
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
N + + + + T ++ + + +
Sbjct: 161 LGELYGNPELFANLNAAVENTALAAAEATKLTTQMGQLVEIAKLELGNFSASVDQNMNLF 220
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+++ + + + S + + + + T + Q+++ L++ S + +
Sbjct: 221 SSEMTQLSDQLERSMQEVSGAALQSANSLDRVTGDISALTQEVNALVATNRSTLLTT--- 277
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
L NI +++ + +I+ + + + ++ + +E +++N +S+ ++ +NN
Sbjct: 278 --LNNINETSQELSVAIATLTPVIARFEQGEL-LTNLETLSANAVIASENLRDVSKTVNN 334
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS--IGNNLQNFSQSGLNDIQNLVRKLQ 416
L A+ + + + I + ++L+ GL +I +L+
Sbjct: 335 PDNLILLQQTLDSARSTLQNMQKVTADIEDLTGDPRLRDSLRRIIN-GLGNILASTEELE 393
Query: 417 E------TVNHFDDCLNNFERNPQDIVW 438
T+ + +++
Sbjct: 394 RQTAVAETLAPLSQAAEAGDEKTIKLLF 421
>gi|284052669|ref|ZP_06382879.1| methyl-accepting chemotaxis sensory transducer [Arthrospira
platensis str. Paraca]
Length = 460
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/448 (10%), Positives = 140/448 (31%), Gaps = 37/448 (8%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S++ SVGL ++ + + +WL ++ P S GL VR
Sbjct: 1 MRSRSVREGSVGLLIILGVGLFGATAFWLRGL-TLGQQSYQIRAEFP-SATGLQIGVPVR 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGR+ + I D + ++ + G TY+++
Sbjct: 59 YRGVKVGRVTRIQPQSNG---VEVVLNIESTDLVMPRNSQVLVNQTGFLNETYVDIIPNA 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + S + + + +
Sbjct: 116 VLTPELVAANPISAT---------------CPSSDILCHESSIQGLPGISPDRLMETMLD 160
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
N + + + + T ++ + + +
Sbjct: 161 LGELYGNPELFANLNAAVENTALAAAEATKLTTQMGQLVEIAKLELGNFSASVDQNMNLF 220
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+++ + + + S + + + + T + Q+++ L++ S + +
Sbjct: 221 SSEMTQLSDQLERSMQEVSGAALQSANSLDRVTGDISALTQEVNALVATNRSTLLTT--- 277
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
L NI +++ + +I+ + + + ++ + +E +++N +S+ ++ +NN
Sbjct: 278 --LNNINETSQELSVAIATLTPVIARFEQGEL-LTNLETLSANAVIASENLRDVSKTVNN 334
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS--IGNNLQNFSQSGLNDIQNLVRKLQ 416
L A+ + + + I + ++L+ GL +I +L+
Sbjct: 335 PDNLILLQQTLDSARSTLQNMQKVTADIEDLTGDPRLRDSLRRIIN-GLGNILASTEELE 393
Query: 417 E------TVNHFDDCLNNFERNPQDIVW 438
T+ + +++
Sbjct: 394 RQTAVAETLAPLSQAAEAGDEKTIKLLF 421
>gi|297569475|ref|YP_003690819.1| Mammalian cell entry related domain protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296925390|gb|ADH86200.1| Mammalian cell entry related domain protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 316
Score = 108 bits (269), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 6/180 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++Y + G+FV+ + +I+W + + G E I+ G++ L+ + VRF
Sbjct: 1 MENRSYALAAGIFVLVLGTAMVLAIWWFAGERELAG---EYILVTEGNIGNLNVGADVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI G++ + LD E P L I P+ T A + TQG+ G+ Y++L +
Sbjct: 58 RGIAAGKVTDIRLDAEDPRQILVTIRIDDQLPVTRGTVAVLDTQGVTGVAYVQLEDDGSD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + E + PS + A + + S ++ K + + +
Sbjct: 118 PRPLVA---EPGYPPRLPLKPSMLTRIAEAALEAMQGLELMSNNLAKFLSAENQVRFDEM 174
>gi|27381003|ref|NP_772532.1| hypothetical protein bll5892 [Bradyrhizobium japonicum USDA 110]
gi|27354169|dbj|BAC51157.1| bll5892 [Bradyrhizobium japonicum USDA 110]
Length = 292
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/241 (19%), Positives = 93/241 (38%), Gaps = 6/241 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ + + W + + + + G GL SV F
Sbjct: 1 METRANYVLIGSFTLAVIAAAIGFVLWFQSLHTT-KQRSPLRVVFEGPAAGLRNGGSVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG +V + LD P +A A++ + P+ T + QGL G+ I L +
Sbjct: 60 NGIRVGEVVSVKLD--NPRRVVALAMVENNAPIRKDTLVGLEFQGLTGVAAISLKGGEE- 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +TA P+ + T + I+ Q+ ++N K L T
Sbjct: 117 --AAPPPPLDEDGIPSLTADPNKLQDVTEAIRGTLQNINKIVADNQESVKNSLKNLETFT 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ S + ++ +D +M ++ +L ++ + + D
Sbjct: 175 NSLARNSEKIDGVMAKVDGVMLKADNLMLGLNTLAGGKDGGELFQAVKSIRELADDFDKR 234
Query: 241 Q 241
Sbjct: 235 S 235
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 58/131 (44%), Gaps = 8/131 (6%)
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + + + D ++ + +++ +E T++L +S+K +M+K++ + +N L +
Sbjct: 148 TLQNINKIVADNQESVKNSLKNLETFTNSLARNSEKIDGVMAKVDGVMLKADNLMLGLNT 207
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
++ + + SI +F + L+ + T+ +NNF+RN
Sbjct: 208 LAGGKD----GGELFQAVKSIRELADDFDKRS----GLLISDGRRTLGDISRAVNNFDRN 259
Query: 433 PQDIVWGREKG 443
P +++G
Sbjct: 260 PTRVLFGASNS 270
>gi|313202097|ref|YP_004040755.1| mammalian cell entry related domain-containing protein
[Methylovorus sp. MP688]
gi|312441413|gb|ADQ85519.1| Mammalian cell entry related domain protein [Methylovorus sp.
MP688]
Length = 314
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/299 (16%), Positives = 115/299 (38%), Gaps = 7/299 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++++ +VGLF + + + F+ +WLS S I V GL+ ++SV+F
Sbjct: 1 MENRSHAIAVGLFTLILGLAAIFAFWWLSGSR---EEKTHYTINSNRPVSGLNPEASVKF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG+++ + LD N + L + A +R QG+ G+ YI+L+
Sbjct: 58 RGVEVGKVLHISLDDNTQNDIHVDIEVTKTLQLSKAAYAELRLQGVTGLAYIDLNDDGSS 117
Query: 121 KKTIFQIATERNQR----AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
++ + T + P I + +++S+ + + +QKI +
Sbjct: 118 QQRLGPDDTIPLRPSFVDRFTEHAPEIIEQVETLVKSSSQLAATAHEMVQKIDTDQLNRT 177
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ L + + + + ++T ++ ++ ++ +
Sbjct: 178 IANLEKASAQLEPLLRTSTATMNRLGSFASERNRQQLESTLKSLQQTSDAVRPLMDTLGQ 237
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ ++ ++ S +T+ + T + Q Q+ + L+ +S
Sbjct: 238 SARDFSSMTGTLTQSSQQLSDSLQQDTLPRLNALTDSLQRDSQQFEQLMETLEDHPQSL 296
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 62/175 (35%), Gaps = 7/175 (4%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
T+ E+ ++++ L+ S + + + + A ++ +
Sbjct: 135 DRFTEHAPEIIEQVETLVKSSSQLAATAHEMVQKIDTDQLNRTIANLEKASAQLEPLLRT 194
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
+T+N + + S N Q+ + + S L ++ F + +
Sbjct: 195 STATMNRLGSFASERNR--QQLESTLKSLQQTS--DAVRPLMDTLGQSARDFSSMTGTLT 250
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ + ++LQ Q L + L LQ F+ + E +PQ ++ G+ K
Sbjct: 251 QSSQQLSDSLQ---QDTLPRLNALTDSLQRDSQQFEQLMETLEDHPQSLLLGKPK 302
>gi|254000134|ref|YP_003052197.1| Mammalian cell entry related domain-containing protein
[Methylovorus sp. SIP3-4]
gi|253986813|gb|ACT51670.1| Mammalian cell entry related domain protein [Methylovorus sp.
SIP3-4]
Length = 314
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/299 (16%), Positives = 116/299 (38%), Gaps = 7/299 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++++ +VGLF + + + F+ +WLS S I V GL+ ++SV+F
Sbjct: 1 MENRSHAIAVGLFTLILGLAAIFAFWWLSGSR---EEKTHYTINSNRPVSGLNPEASVKF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG+++ + LD N + + L + A +R QG+ G+ YI+L+
Sbjct: 58 RGVEVGKVLHISLDDNTQNDIHVEIEVTKTLQLSKAAYAELRLQGVTGLAYIDLNDDGSS 117
Query: 121 KKTIFQIATERNQR----AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
++ + T + P I + +++S+ + + +QKI +
Sbjct: 118 QQRLGPDDTIPLRPSFVDRFTEHAPEIIEQVETLVKSSSQLAATAHEMVQKIDTDQLNRT 177
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ L + + + + ++T ++ ++ ++ +
Sbjct: 178 IANLEKASAQLEPLLRTSTATMNRLGSFASERNRQQLESTLQSLQQTSDAVRPLMDTLGQ 237
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ ++ ++ S +T+ + T + Q Q+ + L+ +S
Sbjct: 238 SARDFSSMTGTLTQSSQQLSDSLQQDTLPRLNALTDSLQRDSQQFEQLMETLEDHPQSL 296
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/175 (14%), Positives = 62/175 (35%), Gaps = 7/175 (4%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
T+ E+ ++++ L+ S + + + + A ++ +
Sbjct: 135 DRFTEHAPEIIEQVETLVKSSSQLAATAHEMVQKIDTDQLNRTIANLEKASAQLEPLLRT 194
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
+T+N + + S N Q+ + + S L ++ F + +
Sbjct: 195 STATMNRLGSFASERNR--QQLESTLQSLQQTS--DAVRPLMDTLGQSARDFSSMTGTLT 250
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ + ++LQ Q L + L LQ F+ + E +PQ ++ G+ K
Sbjct: 251 QSSQQLSDSLQ---QDTLPRLNALTDSLQRDSQQFEQLMETLEDHPQSLLLGKPK 302
>gi|207109055|ref|ZP_03243217.1| ABC transport system substrate binding protein [Helicobacter pylori
HPKX_438_CA4C1]
Length = 182
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 46/111 (41%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI VG ++ + ++ +I+ + + + ++GL G+ +
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKF 111
>gi|237747262|ref|ZP_04577742.1| ABC transporter periplasmic substrate-binding protein [Oxalobacter
formigenes HOxBLS]
gi|229378613|gb|EEO28704.1| ABC transporter periplasmic substrate-binding protein [Oxalobacter
formigenes HOxBLS]
Length = 151
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K+ VGLFV+ F + + + ++ GL + V+
Sbjct: 1 MQRKSLDIWVGLFVLLGAVALMFLALKAGNMSSFSFEKTYTVSSRFDNIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + +L ++ ++A I T GL G Y+ +
Sbjct: 61 AGVVVGRVGDISFD-DQDFRALVTLQLQERYKFPKDSSAKILTSGLLGEQYVGIEPG 116
>gi|170731750|ref|YP_001763697.1| hypothetical protein Bcenmc03_0395 [Burkholderia cenocepacia MC0-3]
gi|169814992|gb|ACA89575.1| Mammalian cell entry related domain protein [Burkholderia
cenocepacia MC0-3]
Length = 187
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 1 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D ++ + P ++A I T GL G YI L
Sbjct: 60 SAGVVVGRVKSIGFDPNTY-QAVVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGD 118
Query: 120 EKK 122
+
Sbjct: 119 TEM 121
>gi|16126559|ref|NP_421123.1| ABC transporter periplasmic substrate-binding protein [Caulobacter
crescentus CB15]
gi|221235341|ref|YP_002517778.1| ABC membrane transporter periplasmic protein [Caulobacter
crescentus NA1000]
gi|13423843|gb|AAK24291.1| ABC transporter, periplasmic substrate-binding protein, putative
[Caulobacter crescentus CB15]
gi|220964514|gb|ACL95870.1| ABC membrane transporter, periplasmic component [Caulobacter
crescentus NA1000]
Length = 312
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/294 (16%), Positives = 105/294 (35%), Gaps = 6/294 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME Y VG +++ WL++ + ++ I G V GLS V F
Sbjct: 1 MERNANYALVGAISLALFMGLVIFAVWLAKLS-FNRDYDVYDILFVGPVRGLSQGGEVHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + + LD+ N +A+ + D P+ + AT+ QG+ G+ Y++++
Sbjct: 60 NGIKVGEVTRIELDKTDTNRVIARVRVTSDVPIKVDSYATLEPQGITGVNYVQITAGAPN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K+ + + T + + ++ I R + + + K T+
Sbjct: 120 KELLKDTVKTGKVPVIRTQRSALSDLLEGGGTVLTRTIEALDRVNRVLSDRNIKSFGATL 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK-----AID 235
N++ ++ + + + Q ++ S + + + D
Sbjct: 180 TNVQAVTQEMRDRKEILADAQKALQSIDQTAQSITELSNSANTLVDGDAKRTLKELGDAA 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + + +SD + + T Q + +D L+ +
Sbjct: 240 AELRATAKDARGMVTKLEGPASDFATTGLPQLSSAIVTLQSAAESLDRLVGEVE 293
>gi|261838739|gb|ACX98505.1| ABC transport system substrate binding protein [Helicobacter pylori
51]
gi|317182669|dbj|BAJ60453.1| ABC transport system substrate binding protein [Helicobacter pylori
F57]
Length = 271
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 84/242 (34%), Gaps = 3/242 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++GL G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLIDRLSVDANQAMQEVMKAIKNVNKILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+I+ + L + D ++ + ++ D L
Sbjct: 178 ASIDDLIANLDSRKVQFDSLIGNANNLVSNVNNVVLDVDKRIKQGQYDFKAMFTPLIMQA 237
Query: 241 QI 242
Q+
Sbjct: 238 QL 239
>gi|317178168|dbj|BAJ55957.1| ABC transport system substrate binding protein [Helicobacter pylori
F16]
Length = 271
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 85/242 (35%), Gaps = 3/242 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++GL G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLIDRLSVDANQAMQEVMKAIKNVNKILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+I+ + L + + D ++ + ++ D L
Sbjct: 178 ASIDDLIANLDSRKAQFDSLIGNANNFVSNVNNVVLDVDKRIKQGQYDFKAMFTPLIMQA 237
Query: 241 QI 242
Q+
Sbjct: 238 QL 239
>gi|284928695|ref|YP_003421217.1| organic solvent resistence ABC transporter ATPase periplasmic
protein [cyanobacterium UCYN-A]
gi|284809154|gb|ADB94859.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [cyanobacterium UCYN-A]
Length = 437
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/428 (10%), Positives = 121/428 (28%), Gaps = 46/428 (10%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLFV+ L + WL + +V GL + +R+ G+ VG+I+
Sbjct: 12 VGLFVIFGLTIFGGLVVWLRG-GVLGQKTYQFFANFK-NVSGLQVGAPIRYRGVTVGKIL 69
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
GL + I + + + I GL G ++++ + I
Sbjct: 70 GLQPNSNG---VRVILEISSNQLRIPKDSNVQINRYGLIGEASVDITPSHNLSEQELAID 126
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + I + + + + I + +
Sbjct: 127 PISEECIKERQILCNNDEVIGKTGSQLVEALTRLSNAYSDPKFIGDVNSAVRNVSKAGDR 186
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ + D+ + + L + + +I ++ + + I+
Sbjct: 187 IAVLSQEVTKLSEVARGQIDGIGDAIRNTDQAAQDASKLIRNVDSIIVENRTDVDKTIKG 246
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
++N + V ++ T + ++ +I L +F + +I
Sbjct: 247 AANLTHNLNTLVEENRENIVNTLNSIEQTSDQIRLLALNFGVTVDKINQGISEIDI---- 302
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ ++L A + N+S + +
Sbjct: 303 ---------------------------KQFANDLESLMSNAALTAKNLQNLSKSLSDPEV 335
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + + R T + + + + +++ ++ D ++
Sbjct: 336 IITIQQTLDSARVTFDNAQKITSDVEELTGD---------PVFRNNIRKLIDGLSDLVSE 386
Query: 429 FERNPQDI 436
E Q +
Sbjct: 387 TESLEQQV 394
>gi|86748753|ref|YP_485249.1| hypothetical protein RPB_1629 [Rhodopseudomonas palustris HaA2]
gi|86571781|gb|ABD06338.1| Mammalian cell entry related [Rhodopseudomonas palustris HaA2]
Length = 291
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 70/160 (43%), Gaps = 6/160 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G+F ++++ +F + W + + + GS GL SV F
Sbjct: 1 METRANYFLIGVFTLAVIAAAFGFVLWFQSLHSTKARS-PLRVVFEGSATGLRNGGSVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG ++ + LD P +A A++ P+ T + QGL G+ I L +
Sbjct: 60 NGVRVGEVISVKLD--NPKRVVALAMVENTAPIRKDTLVGLEFQGLTGVAAISLKGGMET 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + + ++TA P + + + T + ++
Sbjct: 118 APPV---PLDEDGVPVLTADPDLLMDISESVKATLRNVNK 154
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/140 (15%), Positives = 56/140 (40%), Gaps = 22/140 (15%)
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
N + ++ + + + + I++I + ++ K +M I+ ++ K+
Sbjct: 154 KVVAENAETVKESLSNLQVFTSSLARSSDKIDSIMAKVDGVIGKTDSVMQGIDALAGGKD 213
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
LF +A+ +FR+ ++ +++ L+ + T+
Sbjct: 214 GGELF----QAVKSFRELADNLDKRSS------------------ALIIDGRRTLADISR 251
Query: 425 CLNNFERNPQDIVWGREKGS 444
+NNF+RNP +++G +
Sbjct: 252 AINNFDRNPTRVLFGPSNTA 271
>gi|39937022|ref|NP_949298.1| hypothetical protein RPA3961 [Rhodopseudomonas palustris CGA009]
gi|192292849|ref|YP_001993454.1| mammalian cell entry related domain protein [Rhodopseudomonas
palustris TIE-1]
gi|39650879|emb|CAE29402.1| putative periplasmic binding protein for ABC transporter
[Rhodopseudomonas palustris CGA009]
gi|192286598|gb|ACF02979.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris TIE-1]
Length = 297
Score = 108 bits (268), Expect = 2e-21, Method: Composition-based stats.
Identities = 45/242 (18%), Positives = 97/242 (40%), Gaps = 6/242 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ +F + W + + + G+ GL SV F
Sbjct: 1 METRANYFLIGTFTLAVIAAAFGFVLWFQSLHTTKARS-PLRVVFEGAASGLRNGGSVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG +V + LD P +A A++ P+ T + QGL G+ I L +
Sbjct: 60 NGVRVGEVVSVKLD--NPRRVVALAMVENTAPIRKDTQVGLEFQGLTGVAAISLKGGSET 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + ++TA P + + + T + ++ Q+ ++ + L T
Sbjct: 118 APPV---PLDDDGTPVLTADPELLQDISESIKATLRNVNRLVSENQESVKTSLENLQTFT 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+++ S + + +S +D ++ T D+ +L ++ + D
Sbjct: 175 SSLARSSDKIDSIMSRVDGVIAKTDSVMQGIDALAGGKDGGELFQAVKSFRELADNLDKR 234
Query: 241 QI 242
Sbjct: 235 SA 236
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 57/133 (42%), Gaps = 22/133 (16%)
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+ N S +++ + + + + I++I S ++ K +M I+ ++ K+
Sbjct: 156 VSENQESVKTSLENLQTFTSSLARSSDKIDSIMSRVDGVIAKTDSVMQGIDALAGGKDGG 215
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
LF +A+ +FR+ ++ +++ L+ + T+ +
Sbjct: 216 ELF----QAVKSFRELADNLDKRSA------------------TLILDGRRTLADISRAV 253
Query: 427 NNFERNPQDIVWG 439
NNF+RNP +++G
Sbjct: 254 NNFDRNPTRVLFG 266
>gi|317179640|dbj|BAJ57428.1| ABC transport system substrate binding protein [Helicobacter pylori
F30]
gi|317181147|dbj|BAJ58933.1| ABC transport system substrate binding protein [Helicobacter pylori
F32]
Length = 271
Score = 108 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 85/242 (35%), Gaps = 3/242 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++GL G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLIDRLSVDANQAMQEVMKAIKNVNKVLDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+I+ + L + + D ++ + ++ D L
Sbjct: 178 ASIDDLIANLDSRKAQFDSLIGNANNLVSNVNNVVLDVDKRIKQGQYDFKAMFTPLIMQA 237
Query: 241 QI 242
Q+
Sbjct: 238 QL 239
>gi|91976117|ref|YP_568776.1| hypothetical protein RPD_1638 [Rhodopseudomonas palustris BisB5]
gi|91682573|gb|ABE38875.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB5]
Length = 317
Score = 108 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 43/241 (17%), Positives = 93/241 (38%), Gaps = 6/241 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ +F + W + + + G+ GL SV F
Sbjct: 15 METRANYFLIGTFTLAVIAAAFGFVLWFQSLHSTKARS-PLRVVFEGAASGLRNGGSVNF 73
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG ++ + LD P +A A++ P+ T + QGL G+ I L
Sbjct: 74 NGVRVGEVISVKLD--NPKRVVALAMVENTAPIRKDTLVGLEFQGLTGVAAISLKGGLDS 131
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + ++TA P + + + T + ++ + ++ L T
Sbjct: 132 APPV---PLDEDGVPVLTADPELLMDISESVKATLRNLNKVVAENAETVKESLSNLQTFT 188
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A++ S + + + +D ++ T D+ +L ++ + D
Sbjct: 189 ASLARSSDKIDSIMVKVDGVIGKTDSVMQGIDALAGGKDGGELFQAVKSFRELADNLDKR 248
Query: 241 Q 241
Sbjct: 249 S 249
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/143 (13%), Positives = 55/143 (38%), Gaps = 22/143 (15%)
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
N + ++ + + + + I++I ++ K +M I+ ++ K+
Sbjct: 168 KVVAENAETVKESLSNLQTFTASLARSSDKIDSIMVKVDGVIGKTDSVMQGIDALAGGKD 227
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
LF +A+ +FR+ ++ +++ L+ + T+
Sbjct: 228 GGELF----QAVKSFRELADNLDKRSN------------------ALIIDGRRTLVDISR 265
Query: 425 CLNNFERNPQDIVWGREKGSVKI 447
+NN +RNP +++G + +
Sbjct: 266 AVNNLDRNPTRLLFGPSNNAAQE 288
>gi|315585853|gb|ADU40234.1| ABC superfamily ATP binding cassette transporter substrate binding
protein [Helicobacter pylori 35A]
Length = 271
Score = 108 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 36/242 (14%), Positives = 84/242 (34%), Gaps = 3/242 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++GL G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLIDRLSVDANQAMQEVMKAIKNVNKVLDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+I+ + L + D ++ + ++ D L
Sbjct: 178 ASIDDLIANLDSRKVQFDSLIGNANNLVSNVNNVVLDVDKRIKQGQYDFKAMFTPLIMQA 237
Query: 241 QI 242
Q+
Sbjct: 238 QL 239
>gi|163854450|ref|YP_001628748.1| mce related protein [Bordetella petrii DSM 12804]
gi|163258178|emb|CAP40477.1| mce related protein [Bordetella petrii]
Length = 158
Score = 108 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 48/128 (37%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M + VGLFV+ F + + P + ++ GL + V+
Sbjct: 1 MSREKTDFWVGLFVLLGAAALVFLALRAGNLSSFSFTPTYTLTANF-DNIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D + ++ + ++A+I T GL G Y+ LS +
Sbjct: 60 SAGVVVGRVGKISFD-DKVFQAVVTLDLEEGYQFPKDSSASILTSGLLGEQYVGLSAGSE 118
Query: 120 EKKTIFQI 127
E+
Sbjct: 119 EENFADGG 126
>gi|209516601|ref|ZP_03265455.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
gi|209503042|gb|EEA03044.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
Length = 176
Score = 108 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + ++ GL + V+
Sbjct: 1 MKKNVLDFWVGLFVVLGFVALLFLALKAGNMSSLSFQATYQVKLKFDNIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D +L I T+A I T GL G YI L
Sbjct: 61 AGVTVGRVASIGFDSNNY-QALVTIDIDKQYQFPRDTSAKILTSGLLGEQYIGLEPG 116
>gi|221639255|ref|YP_002525517.1| Mammalian cell entry related domain-containing protein [Rhodobacter
sphaeroides KD131]
gi|221160036|gb|ACM01016.1| Mammalian cell entry related domain protein [Rhodobacter
sphaeroides KD131]
Length = 321
Score = 108 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G+F +S + + + WL++ Q D AE I SV+GL S VR+
Sbjct: 1 METRARYVLIGIFTLSSILATLGFLLWLAKV-QLDRTYAEYDILFT-SVEGLGRASPVRY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
NG+ VG ++ + +D E P+ + + TP+ T A + +QG+ G++Y+ LS
Sbjct: 59 NGVDVGEVLNIAVDAEDPSLVRVRIQLAATTPVRTDTKAQVASQGVTGVSYVSLSGG 115
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 60/201 (29%), Gaps = 16/201 (7%)
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + + L +D + + + N + S +
Sbjct: 121 LTAEEDQWPPVIPSERSAVQALTADAPTLLAEAISLLKDIQTFTGPENRAAVESILTNAD 180
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL-----KENNSLFKDAQRAMH 377
Q I + TS LND + + + + + A +E A+
Sbjct: 181 ASVQNIAAITRDAAEATSRLNDFTARLDAMADRADVALASLETALEEGKGAAASARDTFE 240
Query: 378 TFRDTSE--------KINRYIPSIGNNLQ---NFSQSGLNDIQNLVRKLQETVNHFDDCL 426
T E +I + I ++ NF+ +GL L + + TV + + +
Sbjct: 241 TVNRVVERDVPPMIAQIRSAVSGIERSVAGIRNFADNGLPQYATLAAETRRTVTNLNALI 300
Query: 427 NNFERNPQDIVWGREKGSVKI 447
R+P G + S +
Sbjct: 301 AQISRDPARFFLGNQTPSYRR 321
>gi|212703463|ref|ZP_03311591.1| hypothetical protein DESPIG_01507 [Desulfovibrio piger ATCC 29098]
gi|212673123|gb|EEB33606.1| hypothetical protein DESPIG_01507 [Desulfovibrio piger ATCC 29098]
Length = 149
Score = 108 bits (267), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ T+VG+FV+ L + L + +D E++ SV GL + V G
Sbjct: 2 NSFRQTAVGIFVLLGLVCVAYLTIKLGKMEVFDSKGFELVANF-NSVSGLRVGADVEMAG 60
Query: 63 IPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+PVGR+ + LD + + ++ D L T A+++T GL G Y+ L+ E
Sbjct: 61 VPVGRVASIKLDDDLSRRQARVVLILDKDLQLPADTIASVKTSGLIGDKYVNLTAGGSED 120
Query: 122 KTIFQIATERNQ 133
E +
Sbjct: 121 ILASGDTLEETE 132
>gi|207091859|ref|ZP_03239646.1| ABC transport system substrate binding protein [Helicobacter pylori
HPKX_438_AG0C1]
Length = 271
Score = 108 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 77/201 (38%), Gaps = 3/201 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++GL G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLMDRLSVDANQAMQEVMKAIKNVNKILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMM 201
A++ + L + + D ++
Sbjct: 178 ASVNDLIANLDSRKTQFDSLI 198
>gi|288819065|ref|YP_003433413.1| ABC-type transport system [Hydrogenobacter thermophilus TK-6]
gi|288788465|dbj|BAI70212.1| ABC-type transport system [Hydrogenobacter thermophilus TK-6]
gi|308752648|gb|ADO46131.1| virulence factor Mce family protein [Hydrogenobacter thermophilus
TK-6]
Length = 523
Score = 108 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/355 (14%), Positives = 124/355 (34%), Gaps = 16/355 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VG FV+++ F I + P +V +V GLS + VR GI
Sbjct: 4 STEFKVGTFVIAVSLAFAFLILTFGEI-PFLKPGVKVYKVYFDNVAGLSKGAEVRVAGIK 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
G++ + L + LY +A I T GL G Y+ ++ +
Sbjct: 63 SGKVRSVEL---KDGKVEVIFEVDKSINLYRDASAQIGTLGLMGDKYLAINPGNPSSGLL 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + + N S+ I + Q I+ + + + N+E
Sbjct: 120 SEGQVIQKTYGY-----ADTDRLVKELTNASESIRLMVENFQLILMENREDIRRIVQNLE 174
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+S L + + T ++ +++ + S I+ + ++E
Sbjct: 175 MLSDSLNKMALENRENLRQT-----IANLNILVASLSRTLPSTIASIERLSNDLDRAVVE 229
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
N + + + E + ++ + ++ + ++ +++ T++ L +
Sbjct: 230 NRGDIKESLENLRSLTSDLKTSLPELVKNLNDLSRNLNAIATENRENLRA--TTSNLAEL 287
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
S + +I ++ + + + E + N+ +++ FA+ +
Sbjct: 288 TTSLKKSSQDLQSILARIERGEGTLGKLVKDEELYRNITSATKTFAKAGEVADKT 342
>gi|317010163|gb|ADU80743.1| ABC transport system substrate binding protein [Helicobacter pylori
India7]
Length = 271
Score = 108 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 78/201 (38%), Gaps = 3/201 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++GL G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLIDRLSVDANQAMQEVMKAIKNVNKILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMM 201
A+++ + L + + D ++
Sbjct: 178 ASVDDLIANLDSRKTQFDSLI 198
>gi|237749419|ref|ZP_04579899.1| ABC-type transport system [Oxalobacter formigenes OXCC13]
gi|229380781|gb|EEO30872.1| ABC-type transport system [Oxalobacter formigenes OXCC13]
Length = 151
Score = 108 bits (267), Expect = 3e-21, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K VG FV+ F + + ++ GL + V+
Sbjct: 1 MQRKPLDIWVGFFVLLGAAALMFLALKAGNMSSLSFDKTYTVSSRFDNIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + +L ++ ++A I T GL G YI + E
Sbjct: 61 AGVVVGRVGDISFD-DQDYRALVTLQLQEKYKFPKDSSAKILTSGLLGEQYIGIEPGGDE 119
Query: 121 KK 122
Sbjct: 120 TY 121
>gi|115523492|ref|YP_780403.1| hypothetical protein RPE_1473 [Rhodopseudomonas palustris BisA53]
gi|115517439|gb|ABJ05423.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris BisA53]
Length = 293
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 46/243 (18%), Positives = 94/243 (38%), Gaps = 6/243 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +GLF V+++ + + W + + I GS GL +V F
Sbjct: 1 METRANYFLIGLFTVAVVASALGFVLWFQALHTTKLRS-PLRIVFEGSASGLRNGGNVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ +G ++ + LD P +A A++ P+ T + QGL G+ I L ++
Sbjct: 60 NGVRIGEVITVKLD--NPRRVVALAMVENSAPIRKDTLVGLEFQGLTGVAAISLKGGQET 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + M+TA PS + T ++ + ++N + + T
Sbjct: 118 APPV---PLDDDGVPMLTADPSLLQDIGEAVRATLTNVNRMVADNEDALKNSLQNVMTFT 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ S + + + DK++ T D+ +L ++ + D
Sbjct: 175 QSLANSSEHIDSIMRKTDKLISKTDNIMLGLDALAGGKDGGELFQAVKSFRELADNLDKR 234
Query: 241 QIL 243
Sbjct: 235 ASA 237
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 56/135 (41%), Gaps = 22/135 (16%)
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
N + ++++ + Q + ++ I++I + K +M ++ ++ K+
Sbjct: 154 RMVADNEDALKNSLQNVMTFTQSLANSSEHIDSIMRKTDKLISKTDNIMLGLDALAGGKD 213
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
LF +A+ +FR+ ++ +++ L+ + T++
Sbjct: 214 GGELF----QAVKSFRELADNLDKRAS------------------ALMLDGRRTLSDISR 251
Query: 425 CLNNFERNPQDIVWG 439
+NN ++NP I++G
Sbjct: 252 AVNNLDKNPTRILFG 266
>gi|307731183|ref|YP_003908407.1| Mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1003]
gi|307585718|gb|ADN59116.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1003]
Length = 184
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + ++ GL + V+
Sbjct: 1 MKKTALDFWVGLFVVLGFVALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKARAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D +L I T+A I T GL G YI L
Sbjct: 61 AGVTVGRVASIGFDSNAY-QALVTIDIDRQYQFPKDTSAKILTSGLLGEQYIGLEPG 116
>gi|107024235|ref|YP_622562.1| hypothetical protein Bcen_2691 [Burkholderia cenocepacia AU 1054]
gi|116688440|ref|YP_834063.1| hypothetical protein Bcen2424_0416 [Burkholderia cenocepacia
HI2424]
gi|254246537|ref|ZP_04939858.1| Mce4/Rv3499c/MTV023.06c protein [Burkholderia cenocepacia PC184]
gi|105894424|gb|ABF77589.1| Mammalian cell entry related protein [Burkholderia cenocepacia AU
1054]
gi|116646529|gb|ABK07170.1| Mammalian cell entry related domain protein [Burkholderia
cenocepacia HI2424]
gi|124871313|gb|EAY63029.1| Mce4/Rv3499c/MTV023.06c protein [Burkholderia cenocepacia PC184]
Length = 189
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 61
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D ++ + P ++A I T GL G YI L
Sbjct: 62 SAGVVVGRVKSIGFDPNTY-QAVVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGD 120
Query: 120 EKK 122
+
Sbjct: 121 TEM 123
>gi|323527529|ref|YP_004229682.1| mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1001]
gi|323384531|gb|ADX56622.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1001]
Length = 186
Score = 107 bits (266), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + ++ GL + V+
Sbjct: 1 MKKTALDFWVGLFVVLGFVALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKARAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D +L I T+A I T GL G YI L
Sbjct: 61 AGVTVGRVASIGFDSNAY-QALVTIDIDKQYQFPKDTSAKILTSGLLGEQYIGLEPG 116
>gi|160871631|ref|ZP_02061763.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Rickettsiella grylli]
gi|159120430|gb|EDP45768.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Rickettsiella grylli]
Length = 156
Score = 107 bits (266), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 50/135 (37%), Gaps = 2/135 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG F++ + F + +S + G + ++ GL S V
Sbjct: 1 MRERVIEIWVGFFMLFGVLALLFLAFKVSGLSSTIGRGGYNVTAAFDNIGGLKMRSPVSL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG + + LD + ++ I L T+A+I TQGL G YI L+
Sbjct: 61 AGVHVGEVSAIKLD-DLKFKAIVTMRIDSRYKQLPIDTSASILTQGLLGANYINLTPGFA 119
Query: 120 EKKTIFQIATERNQR 134
K +
Sbjct: 120 HKFLNNNDIIQDTHP 134
>gi|39995921|ref|NP_951872.1| mce-related protein [Geobacter sulfurreducens PCA]
gi|39982685|gb|AAR34145.1| mce-related protein [Geobacter sulfurreducens PCA]
gi|298504935|gb|ADI83658.1| ABC transporter, periplasmic substrate-binding protein, MCE family
[Geobacter sulfurreducens KN400]
Length = 149
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV+ + + L + G +V SV GL ++V
Sbjct: 1 MKRVTLELIVGIFVLVGIICLAWLSVRLGQMELLGGDHYQVSADF-DSVSGLKKGATVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + IR L A++RT G+ G +I+L +
Sbjct: 60 AGVEVGRVDRIELDSSNDR-ARVYLRIRDGVKLQDDVIASVRTSGIIGDKFIKLKPGGAD 118
Query: 121 KKTIFQIATERNQ 133
K +
Sbjct: 119 KLLADGGRIRDTE 131
>gi|239906933|ref|YP_002953674.1| hypothetical protein DMR_22970 [Desulfovibrio magneticus RS-1]
gi|239796799|dbj|BAH75788.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 149
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ TSVG+FV++ L + L + G +V + V GL + V
Sbjct: 1 MKKYAMETSVGVFVLAGLLCVAYLTVKLGKLEVVGGDGYQVTAKFKD-VTGLKNGAYVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ G+ LD + + +L + D L A+I+T GL G ++++S +
Sbjct: 60 AGVRIGRVSGIRLDPKD-HAALVGLTLDKDVRLTDDAIASIKTSGLIGDKFVKISPGGSD 118
Query: 121 KKTIFQIATERNQ 133
+
Sbjct: 119 DALTPGGMIVETE 131
>gi|301057236|ref|ZP_07198365.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300448687|gb|EFK12323.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 331
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/288 (16%), Positives = 97/288 (33%), Gaps = 3/288 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK +VGLFV L + +I WL ++Y + SV GL DS V++
Sbjct: 1 MASKKAKFTVGLFVAGGLAITVLAIVWLG-MSRYFEKGRFYVTYFNESVQGLQKDSPVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ + + + I L S A ++ G+ G +EL +
Sbjct: 60 RGVSIGRVESIGVAPDS-KLIQVILKIETGQKLDHSIVAQLKNVGITGSMLVELDRKKMG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ ++ + PS IN + ++ + +
Sbjct: 119 ESDKSPGISFPSEYPIVASKPSEINRLLQGLDDMLNHFKSIDLKGISDKLKLTLDNANIM 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
I + + S + + S + + + +L K + ++ N
Sbjct: 179 MADADIKGISSKLQSSLTSADQILKNEKWESILG-SVDHAAESADALMKNAERTLVRLEN 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I EN + S ++N + + + ++ L
Sbjct: 238 FIGENEKPVSEAATDLRKVMVNANNLLEKWAAFISSSDDTLNRLKVQL 285
>gi|198282479|ref|YP_002218800.1| Mammalian cell entry related domain-containing protein
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665055|ref|YP_002424669.1| mce-related protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247000|gb|ACH82593.1| Mammalian cell entry related domain protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218517268|gb|ACK77854.1| mce-related protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 152
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 1/133 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + VG+FV+ + + + + V+ +V L S V+
Sbjct: 1 MEKRAIDWWVGIFVLLGIAALVVLALRVGNLSGFAYNDGYVLHADFSNVGSLKPRSPVKL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + ++ + + I P L T A+I T+GL G Y+ +
Sbjct: 61 GGVTIGEVTHIGMNPKTF-MAKVTMRIEPQVKLPTDTGASIYTEGLLGEQYVSIQPGGMP 119
Query: 121 KKTIFQIATERNQ 133
+ Q
Sbjct: 120 QDLQPGGTITMTQ 132
>gi|108563876|ref|YP_628192.1| ABC transport system substrate binding protein [Helicobacter pylori
HPAG1]
gi|107837649|gb|ABF85518.1| ABC transport system substrate binding protein [Helicobacter pylori
HPAG1]
Length = 271
Score = 107 bits (265), Expect = 4e-21, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 78/201 (38%), Gaps = 3/201 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++GL G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLMDRLSVDANQVMQEVMRAIRNVNRILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMM 201
A+++ + L + + D ++
Sbjct: 178 ASVDDLIANLDSRKTQFDALI 198
>gi|88810290|ref|ZP_01125547.1| hypothetical protein NB231_14458 [Nitrococcus mobilis Nb-231]
gi|88791920|gb|EAR23030.1| hypothetical protein NB231_14458 [Nitrococcus mobilis Nb-231]
Length = 304
Score = 107 bits (265), Expect = 5e-21, Method: Composition-based stats.
Identities = 55/292 (18%), Positives = 106/292 (36%), Gaps = 5/292 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK YT VGLFVV + + W + ++ G + + GSV GL+ + V +
Sbjct: 1 MGSKVSYTLVGLFVVLLTIGLVATGLWFAGGLKHTGQFRQYSVYTAGSVAGLTPGAQVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG++V + +D P+ TP+ +T A + +GL G T +ELS
Sbjct: 61 KGIGVGKVVRIAIDHRDPSRVHVVLAAARSTPINTATRAAFKPRGLTGATLVELSGYAAN 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ E + + + +E + + + E+ + + + +
Sbjct: 121 AAPLSAPPGEPYPVIRSKNS-ALTQLDQALSEGIGTLNRIGKQFEELLSEHNRQAIASIL 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT----DLITSLDKMIKAIDL 236
A+ +S+ LA N I++ + +S T D +
Sbjct: 180 ADFARLSSTLATNSERIEQTLVHLDQITQNSAQITRHIPKTLGRLDRSLQGLDQLSRSLN 239
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
Q + + + ++ +R TT + QK++ +
Sbjct: 240 QTATTLTGLGRSGETGLRTTMPELKALFAQIRRTTSHLDRLIQKLEREPAAL 291
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/243 (10%), Positives = 72/243 (29%), Gaps = 13/243 (5%)
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS 256
+ K++ S + L + + N
Sbjct: 65 VGKVVRIAIDHRDPSRVHVVLAAARSTPINTATRAAFKPRGLTGATLVELSGYAANAAPL 124
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
S +R ++ Q + + + K E N S +
Sbjct: 125 SAPPGEPYPVIRSKNSALTQLDQALSEGIGTLNRIGKQFEELLSEHNRQAIASILADFAR 184
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
+ ++I T+ ++ IT N ++ + + +++ + +
Sbjct: 185 LSSTLATNSERIEQTLVHLDQITQNSAQITRHIPKTLGRLDRSL-------------QGL 231
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ + + +G + + ++ + +++ L +++ T +H D + ER P +
Sbjct: 232 DQLSRSLNQTATTLTGLGRSGETGLRTTMPELKALFAQIRRTTSHLDRLIQKLEREPAAL 291
Query: 437 VWG 439
+ G
Sbjct: 292 LRG 294
>gi|218961391|ref|YP_001741166.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167730048|emb|CAO80960.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 410
Score = 106 bits (264), Expect = 5e-21, Method: Composition-based stats.
Identities = 61/441 (13%), Positives = 139/441 (31%), Gaps = 32/441 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK +G+F++ ++ S + I SV GL SSV +
Sbjct: 1 MVSKAAKIRLGIFLIIGAILIILFAIVVAGSRLVEKKDIYYIEFEDYSVSGLQVGSSVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI +GR+ + ++ + + + TP+ T A + G+ G+ +EL E
Sbjct: 61 RGIKIGRVEDVKINPKDVTKIIITISVNRGTPIKEDTEAVLLLSGITGLKNVELRGGTNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + ++ + + + ++ + + + T+ I
Sbjct: 121 AKLLKPKSYIKTGTTVLEDISERAKSIVDKIDMIAANLNAITGEENRNNISTILAQTSLI 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T I+ + + +
Sbjct: 181 LKDTH-----------------------------ENLATTMQSISRIANNTADLTEELSK 211
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + + N + + + +V ET+QT + +++ ETS
Sbjct: 212 DLSAVTENLTKNLDAITSSATSNIQNVSETSQT--SLINVTNNVNQQLEELTAKLETSLT 269
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
S +++ Q I+ T I I++N+N + + ++ S
Sbjct: 270 QLTNDGSALIREANLKVSTVGEHSDQMILETTREILTISNNINRALDQVNAILYTPGFDS 329
Query: 361 ALKENNSLFKDAQRA-MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
+ L + R + + + ++ +NL G D+ ++ L ET
Sbjct: 330 LMTNLGKLSGELSRTDLKSMVTELSTTIQKTGTLVSNLNRVVTRGQGDLLEILSTLTETS 389
Query: 420 NHFDDCLNNFERNPQDIVWGR 440
+ ++ P ++ G
Sbjct: 390 ENLNEFSRQIADTPAILLRGN 410
>gi|298735567|ref|YP_003728088.1| putative ABC transport system substrate-binding protein
[Helicobacter pylori B8]
gi|298354752|emb|CBI65624.1| putative ABC transport system substrate-binding protein
[Helicobacter pylori B8]
Length = 271
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 45/111 (40%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI VG ++ + ++ +I+ + + + ++G G+ +
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKF 111
>gi|186477516|ref|YP_001858986.1| hypothetical protein Bphy_2768 [Burkholderia phymatum STM815]
gi|184193975|gb|ACC71940.1| Mammalian cell entry related domain protein [Burkholderia phymatum
STM815]
Length = 184
Score = 106 bits (264), Expect = 6e-21, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 40/117 (34%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + ++ GL + V+
Sbjct: 1 MKKTALDFWVGLFVVLGFIALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D +L + T+A I T GL G YI L
Sbjct: 61 AGVTVGRVGAIGFDSNSY-QALVTLDLDKQYQFPKDTSAKILTSGLLGEQYIGLEPG 116
>gi|224369298|ref|YP_002603462.1| ABC-type transporter involved in resistance to organic solvents,
periplasmic binding component [Desulfobacterium
autotrophicum HRM2]
gi|223692015|gb|ACN15298.1| ABC-type transporter involved in resistance to organic solvents,
periplasmic binding component [Desulfobacterium
autotrophicum HRM2]
Length = 149
Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 49/133 (36%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG FV+ L + + L G + GSV GL + V
Sbjct: 1 MKKTTVELYVGFFVIIGLVCCAYIVVQLGGLRINQGDQYTLNA-FFGSVAGLKPGADVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD+E + + + L A+++T G+ G YI LS E
Sbjct: 60 AGVAVGQVASISLDRERF-VAKVEISLDKKILLSEDVIASVKTSGIIGDKYINLSPGGSE 118
Query: 121 KKTIFQIATERNQ 133
+
Sbjct: 119 TTLSPGGTIFHTE 131
>gi|254442151|ref|ZP_05055627.1| mce related protein [Verrucomicrobiae bacterium DG1235]
gi|198256459|gb|EDY80767.1| mce related protein [Verrucomicrobiae bacterium DG1235]
Length = 154
Score = 106 bits (263), Expect = 7e-21, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK SVGLFV+ L + + S V ++ GLS+ S++
Sbjct: 1 MNSKKIDFSVGLFVLIGLLAIVYMAVQIGGSRFLGSDSRSVTAIFT-NIGGLSSGSNITI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + L+ E + + I D L+ TA+I+T GL G YI +
Sbjct: 60 AGVKIGTVGPITLNPETL-KAEVELRIDNDIELFDDATASIKTNGLIGDKYIAIYPGTPG 118
Query: 121 KKTIFQIATERNQ 133
+ A +
Sbjct: 119 IGFPLEGAIVDTE 131
>gi|303246387|ref|ZP_07332666.1| Mammalian cell entry related domain protein [Desulfovibrio
fructosovorans JJ]
gi|302492097|gb|EFL51972.1| Mammalian cell entry related domain protein [Desulfovibrio
fructosovorans JJ]
Length = 149
Score = 106 bits (263), Expect = 8e-21, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 2/117 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T+VG+FV++ L + L + G V R V GL + + V
Sbjct: 1 MKKYTMETTVGVFVLAGLLCVAYLTIKLGKLEVIGGDSYSVTARFKD-VTGLKSGAYVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ G+ LD + N ++ I+ L + A+I+T GL G ++++S
Sbjct: 60 AGVRIGRVTGIRLDPKN-NMAMVTLDIQNGVRLTDDSIASIKTSGLIGDKFVKVSPG 115
>gi|316935523|ref|YP_004110505.1| mammalian cell entry related domain-containing protein
[Rhodopseudomonas palustris DX-1]
gi|315603237|gb|ADU45772.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris DX-1]
Length = 291
Score = 106 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/242 (18%), Positives = 95/242 (39%), Gaps = 6/242 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ + + W + + + G+ GL SV F
Sbjct: 1 METRANYFLIGTFTLAVIAAALGFVLWFQSLHTTKARS-PLRVVFEGAASGLRNGGSVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG +V + LD P +A A++ P+ T + QGL G+ I L +
Sbjct: 60 NGVRVGEVVSVKLD--NPRRVVALAMVENTAPIRKDTQVGLEFQGLTGVAAISLKGGSET 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + ++TA P + + + T + ++ Q+ ++ + L T
Sbjct: 118 APPV---PLDDDGTPVLTADPELLQDISESIKATLRNVNRLVADNQESVKTSLENLQTFT 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + S + + +S +D ++ T D+ +L ++ + D
Sbjct: 175 SGLARSSDKIDSIVSRVDSVIAKTDSVMQGIDALAGGKDGGELFQAVKSFRELADNLDKR 234
Query: 241 QI 242
Sbjct: 235 SA 236
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 57/138 (41%), Gaps = 22/138 (15%)
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
N S +++ + + + + I++I S ++ K +M I+ ++ K+
Sbjct: 156 VADNQESVKTSLENLQTFTSGLARSSDKIDSIVSRVDSVIAKTDSVMQGIDALAGGKDGG 215
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
LF +A+ +FR+ ++ +++ L+ + T+ +
Sbjct: 216 ELF----QAVKSFRELADNLDKRSA------------------TLILDGRRTLADISRAV 253
Query: 427 NNFERNPQDIVWGREKGS 444
NNF+RNP +++G +
Sbjct: 254 NNFDRNPTRVLFGPSNTA 271
>gi|67922747|ref|ZP_00516249.1| Mce4/Rv3499c/MTV023.06c protein [Crocosphaera watsonii WH 8501]
gi|67855401|gb|EAM50658.1| Mce4/Rv3499c/MTV023.06c protein [Crocosphaera watsonii WH 8501]
Length = 465
Score = 106 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 57/437 (13%), Positives = 139/437 (31%), Gaps = 45/437 (10%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF + L + WL + +VDGL + VR+ G+ VG+I+
Sbjct: 12 VGLFALFGLIIFGSIVVWLRG-GILGQQTYQFFADF-ENVDGLQIGAPVRYRGVAVGKIL 69
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
GL I + + + I GL G ++++ R+
Sbjct: 70 GLQPSSNG---VTVAVEISSAELRIPKDSKVRINRSGLIGEASVDITPSRE--------- 117
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
++ + K + + + + E I+ + + T +
Sbjct: 118 ---------------LDEEALAIDPVGKDCASAEQILCNNDEGIKGERGSQLVEALTRLS 162
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ + + + + D T + ++ + ++ + +
Sbjct: 163 RAYSDPEFVGNLNAAARNVAKAGDKIATLSQEVTELSKAARGEIGGVSDLISSADQAAKD 222
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+S + + V D T + + +D L+S+ L +I ++
Sbjct: 223 ASQLMLNVNTVVAENRTDFNRTVSSAANLVSNLDGLVSENRG-----NIVNTLSSIERTS 277
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+R D+ + I I + + ++L A+ + N+S + +
Sbjct: 278 DQVRLLAMNFNTTVDRVNEGIDEI-DMAQLANDLEVLMANAAQTAQNLQNLSQSLNDPEV 336
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + + R T E + + + + +++ ++ + +
Sbjct: 337 LVTIQKTLDSARVTFENTQKITSDVEELTGD---------PTFRQNIRKLIDGLGNLVAY 387
Query: 429 FERNPQDIVWGREKGSV 445
E+ Q + G+ SV
Sbjct: 388 TEQLEQQVYVGQVIESV 404
>gi|152981828|ref|YP_001354933.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Janthinobacterium sp.
Marseille]
gi|151281905|gb|ABR90315.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Janthinobacterium sp.
Marseille]
Length = 304
Score = 106 bits (262), Expect = 8e-21, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 3/125 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + G+F + +L + W +R I SV GL+ + VR+
Sbjct: 1 MENKAHALMAGIFTIVLLIAAVLIALWFNRDRV---ERVPYEIATTLSVPGLNPQAGVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + P L + + DTP+ ST AT+ QG+ G+ Y++L +
Sbjct: 58 RGLDVGRVDAVLFDPQKPGQILIRFSVSKDTPITHSTFATLSYQGVTGLAYVQLDDDGSQ 117
Query: 121 KKTIF 125
+
Sbjct: 118 PVLLP 122
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 3/124 (2%)
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
+ I + + N IE I L + K L +K ++ +A +
Sbjct: 166 ENQKTILSSFSDVSAAANKIEKIPQQLQPTLDKLPALANKADSALNSIN--RFSDEATQI 223
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
T I+ + N + + + L+ + + ++ + L +F + PQ
Sbjct: 224 TSKLNATGGPIDS-LDDTINKVGSAASLVEYQASPLIDETRTSMRSLNRALESFNQRPQG 282
Query: 436 IVWG 439
I++G
Sbjct: 283 ILFG 286
>gi|332187413|ref|ZP_08389151.1| mce related family protein [Sphingomonas sp. S17]
gi|332012574|gb|EGI54641.1| mce related family protein [Sphingomonas sp. S17]
Length = 320
Score = 106 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 30/132 (22%), Positives = 53/132 (40%), Gaps = 2/132 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ + VG V+ +L W++R E I SVDGL+ S+V +
Sbjct: 1 METRSNHVLVGSVVLILLAVLAIFTVWIARLGGTSEK--EYDIFFRQSVDGLAKGSAVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+P G++ + L + P + + TP+ TTA+I T +
Sbjct: 59 SGVPSGQVKEIALWRPDPQFVRVRVSVNEQTPILQGTTASISASFTGTSTISLDGARKGA 118
Query: 121 KKTIFQIATERN 132
R+
Sbjct: 119 PPITCPQPENRS 130
>gi|94986677|ref|YP_594610.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Lawsonia
intracellularis PHE/MN1-00]
gi|94730926|emb|CAJ54289.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Lawsonia
intracellularis PHE/MN1-00]
Length = 147
Score = 106 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 52/129 (40%), Gaps = 3/129 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ +VG FV+ L + L + ++ V SV GL + V G+
Sbjct: 4 SKEAAVGFFVLIGLICLGYLTIKLGKMELFNSDGYSVFATFT-SVSGLKPGAEVDIAGVK 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VGR+ + LD + P ++ + + + L A+++T GL G YI +S + +
Sbjct: 63 VGRVKSIRLDNKLPR-AIVELNVNNNIHLTDDAIASVKTSGLIGDKYISISPG-GTGEPL 120
Query: 125 FQIATERNQ 133
+
Sbjct: 121 KNGDEIMDT 129
>gi|84516866|ref|ZP_01004224.1| putative ABC transporter, periplasmic substrate-binding protein
[Loktanella vestfoldensis SKA53]
gi|84509334|gb|EAQ05793.1| putative ABC transporter, periplasmic substrate-binding protein
[Loktanella vestfoldensis SKA53]
Length = 564
Score = 106 bits (262), Expect = 9e-21, Method: Composition-based stats.
Identities = 53/435 (12%), Positives = 134/435 (30%), Gaps = 9/435 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + +G+F ++ + + WL+ Q D I + V GL +V +
Sbjct: 1 METRANFILIGIFTLAAMLGTLGFFIWLASV-QLDRQYVTYGILL-DDVSGLDAAGAVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG ++GL + ++ P+ + TP+ +T A +++QG+ G+ +I LS
Sbjct: 59 NGIAVGSVIGLRIFEDDPSKVFTIIQVDAATPVSTATIAQLQSQGVTGVAFISLSATDGV 118
Query: 121 KKTIFQIA----TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK--IIENIEK 174
I A ++R+ + A ++ A +++ + + + + +
Sbjct: 119 AAPIDTFAGGLPIIDSKRSTVQALVEDAPNLLAEARLLLQQVQGFAGAENQALVADILRN 178
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
TT + +S + + D TQ T S ++
Sbjct: 179 LSRTTGRLDQALSDFSEISGTVRDATAQITQFTERLDTIGEAVEITLRSTDSALVAVQQA 238
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + + + + E + + + D ++
Sbjct: 239 FVSADVVLNTTGPMLDRADGAFTLAENLLREQIPMILAQVSETVLQTNAAVQDIQTRTGR 298
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ + + ++ + + + + ++
Sbjct: 299 TLDGFGETAALLNARLVELETTLADATIAFDAVTTASESLEVLVEGDGAALIAEVRAAVA 358
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
+ + + + D +RA+ T E + + L + G +
Sbjct: 359 TVETVVNT-DLPLIVADVRRAVQTASVAVEDVAADVTGFTGRLTPLADDGQAALTAATDL 417
Query: 415 LQETVNHFDDCLNNF 429
+ +
Sbjct: 418 IAQAQTSLAALNTTL 432
>gi|121607912|ref|YP_995719.1| hypothetical protein Veis_0922 [Verminephrobacter eiseniae EF01-2]
gi|121552552|gb|ABM56701.1| Mammalian cell entry related domain protein [Verminephrobacter
eiseniae EF01-2]
Length = 321
Score = 106 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + GLFV+ + WL+R N Y E + V GL ++VR+
Sbjct: 1 MENKSHALAAGLFVLLVAAMLAGLSLWLTRDNAY---YEEYELSTRDGVSGLQPQANVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + + L + + P+ P+T A + QG+ G+ ++ L
Sbjct: 58 KGVAVGKVTRIGFDPQVNGNVLIRIAVNEQAPISPTTYAVLGYQGVTGLAHVLLDDAATP 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + PS A + +++R I +++ + +
Sbjct: 118 YPALPPGP---GGLPRLPLKPSPFGRLAEQAPTILAQADEATRRINQLLGDGNQQ 169
>gi|114330427|ref|YP_746649.1| hypothetical protein Neut_0406 [Nitrosomonas eutropha C91]
gi|114307441|gb|ABI58684.1| Mammalian cell entry related domain protein [Nitrosomonas eutropha
C91]
Length = 301
Score = 106 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/288 (17%), Positives = 109/288 (37%), Gaps = 10/288 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + + GLFV+ + + ++ WLSR N +I GSV GL+ ++SVR+
Sbjct: 1 MENRAHAFAAGLFVLLLGVAAVMAVKWLSRDNI--NHNHYFLISAGGSVSGLNPEASVRY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ ++ D+E + + + + L + A + +QG+ G+TY+EL+
Sbjct: 59 RGVNIGKVEEIYFDKENIRNIIVRIAVSSHVTLPKNIYAQLASQGITGLTYVELNDDVS- 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
A A I S I + E K + + I ++ + I
Sbjct: 118 ----EAGAGYLENEAHIFLRSSLIKTLSDSLEEILKNSNTVIKQINNLLNKKNQAHIGKI 173
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + + T + L +
Sbjct: 174 LSH---LEQTVQHYDKLTEELQNGLQALPQLTGEFTSTFRQTRQVMENTSQVLQKLNQQQ 230
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+++N+ S + D + T V ++T+ ++ ++
Sbjct: 231 GLIDNLTQGSLEMAHTLDSLNETGQAVTQSTRKLNQLLNLLEAHPQSL 278
Score = 45.3 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 49/126 (38%), Gaps = 4/126 (3%)
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
+ I ++ +E + + +++ + + ++ E S F+ ++ M
Sbjct: 159 NNLLNKKNQAHIGKILSHLEQTVQHYDKLTEELQNGLQALPQLTG--EFTSTFRQTRQVM 216
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFS--QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+K+N+ I N Q L+ + + + ++ + LN E +PQ
Sbjct: 217 ENTSQVLQKLNQQQGLIDNLTQGSLEMAHTLDSLNETGQAVTQSTRKLNQLLNLLEAHPQ 276
Query: 435 DIVWGR 440
+V+G+
Sbjct: 277 SLVFGK 282
>gi|188590869|ref|YP_001795469.1| ABC transporter periplasmic protein [Cupriavidus taiwanensis LMG
19424]
gi|170937763|emb|CAP62747.1| putative ABC-type transporter, periplasmic component [Cupriavidus
taiwanensis LMG 19424]
Length = 314
Score = 106 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 38/316 (12%), Positives = 108/316 (34%), Gaps = 11/316 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ G+F + + F+I+W S + + +V+GL + V++
Sbjct: 2 MENKSHAFLAGVFTIGLAVLVLFAIFWFSSDHAV---RVPYDLITRSTVNGLGPQADVKY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + P + + + +TP+ +T AT+ QG+ GI Y++L
Sbjct: 59 RGLAVGKVESIKFDPQVPGQIIVRVNVNRETPITRTTYATLGFQGVTGIAYVQLDDSAAH 118
Query: 121 KKTIFQIATERNQR------AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ R S + + + +
Sbjct: 119 DGAGASPPLPTSPRAVARIAMRPGFFEELEKRGDSLLTQAETLMGSLNDMFRGANRDELM 178
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS--SDSKNTFNTITDLITSLDKMIK 232
++ + L+++++ + + ++ ++ + + ++ + +
Sbjct: 179 AAIRSVRKTAEDYSRLSDSLAPAAQRLPKVAENLNATLESTRRLTQELANPNGTVMRTVD 238
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
++ + ++ Q+ D R+T ++F+ + + S
Sbjct: 239 SVGRDLQGAAASVQSAAGTFHEETLPQLNGLARDARQTARSFERAAGQFNESPSSVLFGA 298
Query: 293 KSKETSAFLENIADST 308
+ + +
Sbjct: 299 PAPTPGPGEPGFSAAP 314
>gi|170695755|ref|ZP_02886897.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
gi|170139360|gb|EDT07546.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
Length = 184
Score = 106 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 40/122 (32%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + ++ GL + V+
Sbjct: 1 MKKTALDFWVGLFVVLGFVALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKARAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + I T+A I T GL G YI L
Sbjct: 61 AGVTVGRVASIGFDSNAY-QAQVTIDIDKQYQFPKDTSAKILTSGLLGEQYIGLEPGGDT 119
Query: 121 KK 122
+
Sbjct: 120 EM 121
>gi|119897099|ref|YP_932312.1| hypothetical protein azo0808 [Azoarcus sp. BH72]
gi|119669512|emb|CAL93425.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 157
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG+FV L F + + +G I ++ GL + V+
Sbjct: 1 MSRTTLDLWVGIFVALGLAALVFLAMKVGNFSGLNGAALYSIEAPFDNIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D E + I T ATI T GL G Y+ L
Sbjct: 61 AGVLVGRVADIRFDPESYRAV-VRLDIDTRYRFPRDTIATILTSGLLGEQYVGLEPG 116
>gi|146341948|ref|YP_001206996.1| ABC transporter periplasmic-binding protein [Bradyrhizobium sp.
ORS278]
gi|146194754|emb|CAL78779.1| Putative ABC transporter (periplasmic binding protein)
[Bradyrhizobium sp. ORS278]
Length = 293
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 6/201 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F +++L + + W + + + + G GL SV F
Sbjct: 1 METRANYVLIGSFTLAVLAAAVGFVLWFQSLHTT-KQRSPLRVVFEGPAAGLRNGGSVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG ++ + LD P +A A++ + P+ T + QGL G+ I L +
Sbjct: 60 NGIRVGEVISVKLD--NPRRVVALAMVENNAPIRKDTLVGLEFQGLTGVAAISLKGGEE- 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ A P+ + T + I+ Q+ ++N K L
Sbjct: 117 --AAPPPPLDEDGVPLLRADPTRLQDVTEAIRATLQNINKVVADNQEAVKNSIKNLEVFT 174
Query: 181 ANIETISTVLANNISHIDKMM 201
++ S + +S +D +M
Sbjct: 175 QSLARNSERIDGVMSRVDGIM 195
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + + + D ++ + ++I +E T +L +S++ +MS+++ I + L +
Sbjct: 147 ATLQNINKVVADNQEAVKNSIKNLEVFTQSLARNSERIDGVMSRVDGIMGKADTLMLGLN 206
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + I + + S L+ + T++ +NNF+R
Sbjct: 207 TLAGGKDGGELFLTV-KSIRELAEDFDKRSG-------ALMADGRRTLSDISRAVNNFDR 258
Query: 432 NPQDIVWGREKGS 444
NP +++G S
Sbjct: 259 NPTRVLFGASNSS 271
>gi|189218798|ref|YP_001939439.1| organic solvents resistance ABC-type transport system, periplasmic
component [Methylacidiphilum infernorum V4]
gi|189185656|gb|ACD82841.1| organic solvents resistance ABC-type transport system, periplasmic
component [Methylacidiphilum infernorum V4]
Length = 261
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 47/134 (35%), Gaps = 1/134 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME KN VGLF++ L I + R + P ++ + P + GL + V+F
Sbjct: 1 MEPKNLEIKVGLFLLIGLAILGGLIIYFGRYGEKFRPSYQITVEFP-NAYGLIKGAPVQF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G PVGR+V I D + I G+ G I ++
Sbjct: 60 AGAPVGRVVSTPRQIREGRAVEVDLKINADAKIRKDALFQIVDVGMLGDKAIAITPKGTT 119
Query: 121 KKTIFQIATERNQR 134
+ R R
Sbjct: 120 APFLRNGDKVRGSR 133
>gi|46579655|ref|YP_010463.1| hypothetical protein DVU1244 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602862|ref|YP_967262.1| hypothetical protein Dvul_1818 [Desulfovibrio vulgaris DP4]
gi|46449070|gb|AAS95722.1| conserved hypothetical protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|120563091|gb|ABM28835.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
DP4]
gi|311233453|gb|ADP86307.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
RCH1]
Length = 148
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T+ G+FV+ L + L R V+ + SV GL + V
Sbjct: 1 MNKYSRETAAGVFVLLGLLCVAYLTVKLGRMELLADKGYTVMCKFS-SVTGLRVGAEVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+PVGR+ + LD+E+P ++ I L A+++T GL G Y++LS
Sbjct: 60 AGVPVGRVASITLDREHP-LAVVGLRINEGVKLTDDVIASVKTSGLIGDKYVKLSPG 115
>gi|206889644|ref|YP_002248718.1| ABC transporter substrate binding protein [Thermodesulfovibrio
yellowstonii DSM 11347]
gi|206741582|gb|ACI20639.1| ABC transporter substrate binding protein [Thermodesulfovibrio
yellowstonii DSM 11347]
Length = 147
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ ++ VG+FV+ + + + L + + + V V G+ S V
Sbjct: 1 MKKEHLEILVGVFVLIGILSLGYLSFRLGKIDMFKTGYYTVYAEF-DKVGGIKKGSVVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + L ++ + I L + A+IRT+GL G Y++++ E
Sbjct: 60 AGVPVGSVEKVTL--NNKYQAVVELKILSSIKLPDDSIASIRTKGLIGEKYVQITPGGSE 117
Query: 121 KKTIFQIATERNQ 133
+ +
Sbjct: 118 QYIAQNGKIRETE 130
>gi|326388335|ref|ZP_08209931.1| hypothetical protein Y88_3218 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207067|gb|EGD57888.1| hypothetical protein Y88_3218 [Novosphingobium nitrogenifigens DSM
19370]
Length = 312
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 83/298 (27%), Gaps = 2/298 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG + +L W++R N + + I SV+G++ S+V F
Sbjct: 1 METRANHIWVGAVTLFLLVGVAALAIWIARLNHPEQR--QYDIFFKQSVEGVAKGSTVSF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+P G++ + L ++ P + I P+ TTA+++ T +R
Sbjct: 59 SGVPAGQVADISLWEKDPEFVRVRIRIDRKVPILIGTTASLQGSFTGVTTIQLSGAVRGA 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + ++D +
Sbjct: 119 PPITEKGPAGVPVIPTKRSGLGELLSSAPVLLDRLAGLTDRLSMLVSDQNIKAVDHILGN 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T S A + + + S++ K + Q
Sbjct: 179 TERMTGSLAQAAPEVKATLAELQATIRQANYTLASFEKLSDSTNDSINNPDKGVVRQLRE 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ +++ D T + + + +
Sbjct: 239 TLKSANAAANSLQGMVDDARPGMRRLNDRTLPAAESALRDLQTTTRSLRDLTDQMKDR 296
>gi|188528236|ref|YP_001910923.1| ABC transport system substrate binding protein [Helicobacter pylori
Shi470]
gi|188144476|gb|ACD48893.1| ABC transport system substrate binding protein [Helicobacter pylori
Shi470]
gi|308064223|gb|ADO06110.1| ABC transport system substrate binding protein [Helicobacter pylori
Sat464]
Length = 271
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 74/206 (35%), Gaps = 3/206 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S V +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLEDGKYYEYVVYTDKDLGGIATNSPVNY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++G G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ +R +I + + + + + + + + +
Sbjct: 121 EFY---GSGDKGERILIFKEGFMDRLSVDANQVMQEVMKAIKNVNKILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQV 206
+++ + L + D ++
Sbjct: 178 VSVDDLIANLDSRKVQFDALIKNANN 203
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 13/136 (9%), Positives = 45/136 (33%), Gaps = 2/136 (1%)
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ + S + + + +L++ ++ S
Sbjct: 135 FKEGFMDRLSVDANQVMQEVMKAIKNVNKILDDENVEKFKHILVSVDDLIANLD--SRKV 192
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ ++L K+A + + + + +++ + + + + Q +R + V
Sbjct: 193 QFDALIKNANNLVSSANNVALDVDKRLKEGQYDFKAMFTPLIMQAQLSLRNIDNFVEKGS 252
Query: 424 DCLNNFERNPQDIVWG 439
++ F+ NP ++G
Sbjct: 253 ALIDKFDANPYKTIFG 268
>gi|189426232|ref|YP_001953409.1| hypothetical protein Glov_3183 [Geobacter lovleyi SZ]
gi|189422491|gb|ACD96889.1| Mammalian cell entry related domain protein [Geobacter lovleyi SZ]
Length = 150
Score = 105 bits (261), Expect = 1e-20, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 47/121 (38%), Gaps = 1/121 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S VG+F++ + + L + G + R SV GL + V
Sbjct: 1 MNSAKLELIVGIFMLIGILCLGYLSIKLGKMELIGGNNYRISARF-DSVSGLKPGARVEL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + L + + I+ + A++RT G+ G +I+L +
Sbjct: 60 AGVEIGTVERIGLSNASGDQAEVTMKIKDGIKITDDVIASVRTSGIIGDKFIKLKPGGSD 119
Query: 121 K 121
+
Sbjct: 120 Q 120
>gi|73539805|ref|YP_294325.1| hypothetical protein Reut_A0099 [Ralstonia eutropha JMP134]
gi|72117218|gb|AAZ59481.1| Mammalian cell entry related [Ralstonia eutropha JMP134]
Length = 313
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/296 (14%), Positives = 106/296 (35%), Gaps = 11/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ G+F + + F+I+W S + + +V+GL + V++
Sbjct: 2 MENKSHAFLAGVFTIGLAVLVLFAIFWFSSDHAV---RVPYDLVTRSTVNGLGPQADVKY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST---- 116
G+ VG++V + D + P + + + DTP+ +T AT+ QG+ GI Y++L
Sbjct: 59 RGLEVGKVVSIRFDPQVPGQIIVRVNVNKDTPITRTTYATLGFQGVTGIAYVQLDDTAAE 118
Query: 117 -LRKEKKTIFQIATERNQRAMIT-ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + AM S ++ + Q
Sbjct: 119 EGNGASPPLHTSPKAVARIAMRPGFFEELEKRGDSLLTQVETMMTSLNDMFQGGNRAELM 178
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS--SDSKNTFNTITDLITSLDKMIK 232
+I + L+++++ + ++ ++ + +++ ++ + +
Sbjct: 179 AAIRSIHKTAEDYSKLSDSLAPAAARLPKVAENLNATLESTRKLTHDLSNPNGTVLRTVD 238
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + ++ QV D R+T +TF + +
Sbjct: 239 TVGRDLQGAAASIQSAAGTLSQETLPQVNGLARDARQTMRTFDRAAGQFSDSPNSL 294
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 61/167 (36%), Gaps = 12/167 (7%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F+E+ ++ D LL+ + M S N A+ + +RS + + +
Sbjct: 143 FFEELEKRGDSLLTQVETMMTSLNDMFQGGNRAELMAAIRSIHKTAEDYSKLSDSLAPAA 202
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + NLN + + +L ++N + + T + S
Sbjct: 203 ARLPKVAENLNATLESTRKLTHDLSNPNGT------------VLRTVDTVGRDLQGAAAS 250
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
I + SQ L + L R ++T+ FD F +P +++G
Sbjct: 251 IQSAAGTLSQETLPQVNGLARDARQTMRTFDRAAGQFSDSPNSLLFG 297
>gi|257092254|ref|YP_003165895.1| Mammalian cell entry related domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257044778|gb|ACV33966.1| Mammalian cell entry related domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 157
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 41/123 (33%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M K VG FV L F + + + + ++ GL + V+
Sbjct: 1 MSRKLLDLWVGFFVALGLAGVLFLALKVGNLSAANFSEAYPLTAKF-ANIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D E I T A I T GL G YI L
Sbjct: 60 SAGVVVGRVADVRFDPETYEAV-VTFSIDGRYHFPKDTFALILTSGLLGEQYIGLDPGGD 118
Query: 120 EKK 122
EK
Sbjct: 119 EKM 121
>gi|83719099|ref|YP_440933.1| ABC transporter periplasmic substrate-binding protein [Burkholderia
thailandensis E264]
gi|167617724|ref|ZP_02386355.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis Bt4]
gi|257140412|ref|ZP_05588674.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis E264]
gi|83652924|gb|ABC36987.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis E264]
Length = 309
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 102/282 (36%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++L ++YW + + +V GL D++VR+
Sbjct: 1 MENKSHAFWAGLFTIALLAAIVGAVYWFNVDRTV---RVPYDLVSRSNVTGLFPDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + + L+ P+ ST ++ QG+ GI +++L +
Sbjct: 58 RGLDVGKVQSIDFDRGHPGQIVIRILVDTHAPITRSTFGSLGFQGVTGIAFVQLDDTGAD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI--QKIIENIEKPLTT 178
+ A Q M + + + + S + + + ++ +
Sbjct: 118 LAPLPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPDMRDQLKATAAS 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ ++ + + +M T + H+ + N + +
Sbjct: 178 MQHAADGVTHLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASM 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + E + + + + V D T + +
Sbjct: 238 NDTLAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGR 279
Score = 44.5 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 11/173 (6%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ D L +K E +A N S + +
Sbjct: 125 AKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPDMRDQLKATAASMQHAADG 184
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKI 386
+ +E + + + + +S N + A + A +A+ + DT ++
Sbjct: 185 VTHLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASMNDTLAEL 244
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + L L + + D + RNP+ +++G
Sbjct: 245 SARVR----------YDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFG 287
>gi|167561348|ref|ZP_02354264.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia oklahomensis EO147]
gi|167568580|ref|ZP_02361454.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia oklahomensis C6786]
Length = 309
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 103/282 (36%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + +L ++YW + + +V GL D++VR+
Sbjct: 1 MENKSHAFWAGLFTIGLLLAIVGAVYWFNVDRTV---RVPYDLVSRSNVTGLFPDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + + L+ + P+ ST ++ QG+ GI +++L +
Sbjct: 58 RGLDVGKVQSINFDRGHPGEIVIRILVDTNAPITRSTFGSLGFQGVTGIAFVQLDDTGAD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI--QKIIENIEKPLTT 178
+ + A Q M + + + + S + ++ + ++ +
Sbjct: 118 QAPLPTSAKAVAQIPMHPSLFDQLQQRGDVLLKQMEIAAKSINEMLSPEMRDQLKATAAS 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ ++ + + +M T H+ S N + +
Sbjct: 178 MQHAADGVTRLSKQVEPALAQMPETMAHVNHALTSANALVAPGGPLVTNLNRAGQALASM 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + E + + + + V D T + +
Sbjct: 238 NDTLAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGR 279
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 50/173 (28%), Gaps = 11/173 (6%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ D L +K E +A N S + +
Sbjct: 125 AKAVAQIPMHPSLFDQLQQRGDVLLKQMEIAAKSINEMLSPEMRDQLKATAASMQHAADG 184
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKI 386
+ +E + + ++ ++ N + A + A +A+ + DT ++
Sbjct: 185 VTRLSKQVEPALAQMPETMAHVNHALTSANALVAPGGPLVTNLNRAGQALASMNDTLAEL 244
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + L L + + D + RNP+ +++G
Sbjct: 245 SARVR----------YDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFG 287
>gi|254419715|ref|ZP_05033439.1| mce related protein [Brevundimonas sp. BAL3]
gi|196185892|gb|EDX80868.1| mce related protein [Brevundimonas sp. BAL3]
Length = 312
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/298 (17%), Positives = 108/298 (36%), Gaps = 8/298 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME +Y +VG+ V ++ WL+R Q++ I G V+GLS V F
Sbjct: 1 MERDAHYAAVGIATVCLMAALAVFTIWLARL-QFNSDYDLYDIVFYGPVNGLSEGGEVHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L +D + + +A+ + TP+ ++ A + QG+ G+ YI+++
Sbjct: 60 NGIRVGEVTDLNIDTKRGDQVIARVRVDGTTPVRVTSRAQLEPQGITGLNYIQITAGSPN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ + PS I +S + + D+ I +++ + +T
Sbjct: 120 SALLKDQYPDN-VVPVLQSQPSPIAELLSGSGTVLAQTVDALNRINRVMSDDNIRSFSTS 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF------NTITDLITSLDKMIKAI 234
T I + +++ + + I
Sbjct: 179 VKNVEALTTELEARKAIFAELEAAVKNANATILEYQGLAADMRAVVNTDGREAIANINQA 238
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ I + + D +++ + T + QE + + L+ D +
Sbjct: 239 TAEARTAIASANRSITGLERPLGDFATSSLPQLSGTIEELQEATRSLQALIDDVRASP 296
>gi|85858105|ref|YP_460307.1| organic solvents resistance ABC transporter periplasmic protein
[Syntrophus aciditrophicus SB]
gi|85721196|gb|ABC76139.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Syntrophus
aciditrophicus SB]
Length = 172
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T+VG+F+ + + L + + ++ R SV GL + S V
Sbjct: 13 MKKYAMETTVGIFLAVGIILIGYMTVKLGHVSLFGDDTYKLSARFT-SVSGLRSGSPVNM 71
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI +GR+ L +DQ+ + IR D +Y A+I+T+GL G Y+ +
Sbjct: 72 LGIEIGRVEKLAIDQQDLRAV-VEMSIRKDIKIYDDAIASIKTEGLIGDKYLSIDPGGGG 130
Query: 121 KKTIFQIATERNQR 134
Q
Sbjct: 131 DPLQPGGTITETQP 144
>gi|148256835|ref|YP_001241420.1| ABC transporter periplasmic-binding protein [Bradyrhizobium sp.
BTAi1]
gi|146409008|gb|ABQ37514.1| Putative ABC transporter (periplasmic binding protein)
[Bradyrhizobium sp. BTAi1]
Length = 292
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/201 (20%), Positives = 82/201 (40%), Gaps = 6/201 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F ++++ + + W + + + + G GL SV F
Sbjct: 1 METRANYVLIGSFTLAVIAAAVGFVLWFQSLHTT-KQRSPLRVVFEGPAAGLRNGGSVNF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG ++ + LD P +A A++ + P+ T + QGL G+ I L +
Sbjct: 60 NGIRVGEVISVKLD--NPRRVVALAMVENNAPIRKDTLVGLEFQGLTGVAAIALKGGEE- 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ A P+ + T + I+ Q ++N K L
Sbjct: 117 --AAPPPPLDEDGVPVLRADPTRLQDVTEAIRATLQNINKVVADNQDAVKNSIKNLEVFT 174
Query: 181 ANIETISTVLANNISHIDKMM 201
++ S + +S +D +M
Sbjct: 175 QSLARNSERIDGVMSRVDGIM 195
Score = 52.2 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 56/133 (42%), Gaps = 8/133 (6%)
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + + + D + + ++I +E T +L +S++ +MS+++ I + L +
Sbjct: 147 ATLQNINKVVADNQDAVKNSIKNLEVFTQSLARNSERIDGVMSRVDGIMGKADTLMLGLN 206
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + I + + S L+ + T++ +NNF+R
Sbjct: 207 SLAGGKDGGELFLTV-KSIRELAEDFDKRSG-------ALMADGRRTLSDISRAVNNFDR 258
Query: 432 NPQDIVWGREKGS 444
NP +++G S
Sbjct: 259 NPTRVLFGASNSS 271
>gi|116747922|ref|YP_844609.1| hypothetical protein Sfum_0474 [Syntrophobacter fumaroxidans MPOB]
gi|116696986|gb|ABK16174.1| Mammalian cell entry related domain protein [Syntrophobacter
fumaroxidans MPOB]
Length = 164
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 4/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + VGLF++ L + + L N + G V + V GL + V
Sbjct: 1 MERRGLEFGVGLFLLIGLACLGYLSFKLGHLNLWGGSDYPVTAKFST-VAGLKDKAKVFM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + L ++ I D L A+I+T GL G Y+ ++ +
Sbjct: 60 AGVAIGEVQSIGL---KDGEAVVTLSINKDVKLEDDVIASIKTSGLIGDKYVSVTAGASD 116
Query: 121 KKTIFQIATERNQRA 135
+ A Q
Sbjct: 117 QYIKPGGAIRDTQPP 131
>gi|134096233|ref|YP_001101308.1| ABC transporter periplasmic substrate-binding protein
[Herminiimonas arsenicoxydans]
gi|133740136|emb|CAL63187.1| putative ABC transporter [Herminiimonas arsenicoxydans]
Length = 155
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 44/117 (37%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K+ VGLFVV F + + +I ++ GL + V+
Sbjct: 1 MQRKSLDLWVGLFVVLGAVALLFLALKAGNMSSFSFEKNYTVITRFDNIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + I T+A I T GL G YI L
Sbjct: 61 AGVVVGRVADIKFD-DKHYQASVTLDIESRYQFPKDTSAKILTSGLLGEQYIGLEAG 116
>gi|134096150|ref|YP_001101225.1| putative signal peptide protein [Herminiimonas arsenicoxydans]
gi|133740053|emb|CAL63104.1| putative ABC-type transporter [Herminiimonas arsenicoxydans]
Length = 311
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + G+F +++L + W +R I SV GL+ + VR+
Sbjct: 1 MENKAHALLAGIFTIALLIAAVLIALWFNRDRV---ERVPYEIATTLSVPGLNPQAGVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + P L + + DTP+ ST AT+ QG+ G+ Y++L
Sbjct: 58 RGLDVGRVDAVLFDPQKPGQILIRFSVSKDTPITHSTFATLSYQGVTGLAYVQLDDDETN 117
Query: 121 KKTIFQIA 128
+
Sbjct: 118 TTLMPSSP 125
Score = 44.2 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 56/181 (30%), Gaps = 8/181 (4%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
+ + +I + N S + + I
Sbjct: 115 ETNTTLMPSSPKKIARIGLRPGLLDTLQIRGLAILEQTEQVAKRVNSILSDANQKLILGA 174
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ + N + I L + K L +K +N+ L DA + +
Sbjct: 175 FTDVSNAANKVAKIPDQLQPTLDKMPALAAKADNVLVSLN--KLSDDATILTGNLNEFTV 232
Query: 385 KINR------YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++N S N+ + + ++I L+ + + ++ + L F + PQ I++
Sbjct: 233 RLNAPDGPLNGFNSAVTNIGSTASMVEHEIVPLINETRTSMRALNRTLETFNQRPQSILF 292
Query: 439 G 439
G
Sbjct: 293 G 293
>gi|302036235|ref|YP_003796557.1| putative ATP-dependent toluene efflux ABC transporter
periplasmic-binding protein [Candidatus Nitrospira
defluvii]
gi|300604299|emb|CBK40631.1| ABC transporter, periplasmic binding component, putative
ATP-dependent toluene efflux transporter [Candidatus
Nitrospira defluvii]
Length = 147
Score = 105 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME VG+FV+ + + L + G V S GL +SV
Sbjct: 1 MERAKLELMVGVFVLVGIACLGYLSIKLGKLEVIGGHNYPVEAEFT-SASGLKPGASVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L + +L I+ LY T A+I+T+G+ G Y+ LS
Sbjct: 60 AGVEVGRVRHIGLSSD---RALVALAIQDGVKLYSDTIASIKTRGIIGDKYLALSVGGG- 115
Query: 121 KKTIFQIATERNQ 133
+ R+
Sbjct: 116 GDPLKPGDKIRDT 128
>gi|171322153|ref|ZP_02911011.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MEX-5]
gi|171092529|gb|EDT37851.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MEX-5]
Length = 193
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 1 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 60 SAGVVVGRVKAIGFDSNTY-QALVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGD 118
Query: 120 EKK 122
+
Sbjct: 119 TEM 121
>gi|317011597|gb|ADU85344.1| ABC transport system substrate binding protein [Helicobacter pylori
SouthAfrica7]
Length = 271
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 76/201 (37%), Gaps = 3/201 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++G G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLMDRLSGDANQVMQEVMKAIKNVNRILDDQNVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMM 201
A+++ + L + + D ++
Sbjct: 178 ASVDDLIANLDSRKTQFDSLI 198
>gi|209524886|ref|ZP_03273432.1| Mammalian cell entry related domain protein [Arthrospira maxima
CS-328]
gi|209494765|gb|EDZ95074.1| Mammalian cell entry related domain protein [Arthrospira maxima
CS-328]
Length = 460
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/448 (10%), Positives = 145/448 (32%), Gaps = 37/448 (8%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S++ SVGL ++ + + +WL + ++ P S GL VR
Sbjct: 1 MRSRSVREGSVGLLIILGVGLFGATAFWLRGIS-LGQQSYQIRAEFP-SATGLQIGVPVR 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ + VGR+ + I D + ++ + G TYI++
Sbjct: 59 YRAVRVGRVTRIQPQSNG---VEVLLNIESTDLVMPRNSQVLVNQTGFLNETYIDIIPNI 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + S + + + +
Sbjct: 116 VLTPELVAANPIAAD---------------CPSSDILCHESSVQGLPGISPDRLMETMLD 160
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
N + + + + T ++ + + + +
Sbjct: 161 LGELYGNPELFANLNAAVENTALAAAEATQLTTKMGQLVDIAKLELGNFSASVDQNMNLF 220
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+++ + + + + S + + + + + T + Q+++ L++ S + +
Sbjct: 221 SSEMTQLSEQLERSMQEVSGAALQSANSLDQVTGDISALTQEVNALVATNRSTLLTT--- 277
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
L NI +++ + +I+ + + + ++ + +E +++N +S+ ++ +NN
Sbjct: 278 --LNNINETSQELSVAIATLTPVIARFEQGEL-LTNLETLSANAVIASENLRDVSQSVNN 334
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS--IGNNLQNFSQSGLNDIQNLVRKLQ 416
+ A+ + + + I + ++L+ GL +I ++L+
Sbjct: 335 PDNIILLQQTLDSARSTLQNMQKVTADIEDLTGDPRLRDSLRRIIN-GLGNILASTQELE 393
Query: 417 E------TVNHFDDCLNNFERNPQDIVW 438
T+ + + +++
Sbjct: 394 RQTAVAETLAPLSQAADAGDEKTMKLLF 421
>gi|91785390|ref|YP_560596.1| putative signal peptide protein, toluene tolerance Ttg2C-like
[Burkholderia xenovorans LB400]
gi|296159549|ref|ZP_06842373.1| Mammalian cell entry related domain protein [Burkholderia sp.
Ch1-1]
gi|91689344|gb|ABE32544.1| Putative signal peptide protein, toluene tolerance Ttg2C-like
protein [Burkholderia xenovorans LB400]
gi|295890257|gb|EFG70051.1| Mammalian cell entry related domain protein [Burkholderia sp.
Ch1-1]
Length = 181
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 41/122 (33%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + ++ GL + V+
Sbjct: 1 MKKTALDFWVGLFVVLGFVALLFLALKAGNMSSLSFQATYPVKLKFDNIGGLKARAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D ++ + T+A I T GL G YI L
Sbjct: 61 AGVTVGRVGEIGFDSNAY-QAVVTIDLDKQYQFPKDTSAKILTSGLLGEQYIGLEPGGDT 119
Query: 121 KK 122
+
Sbjct: 120 EM 121
>gi|114799224|ref|YP_761597.1| virulence factor Mce-like protein [Hyphomonas neptunium ATCC 15444]
gi|114739398|gb|ABI77523.1| virulence factor Mce homolog [Hyphomonas neptunium ATCC 15444]
Length = 317
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 59/131 (45%), Gaps = 2/131 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G V+ + WL + ++++ + I G V L +VR+
Sbjct: 1 METRANYALIGGLVILAAALVAGFVLWLGQ-SEFNRDYKDYDIVFEGPVS-LEEGGAVRY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG + + +D+ P+ A+ + +TP+ ++A+I+ G+ G T+I++S
Sbjct: 59 IGIKVGEVATVRIDRADPSKVRARIRVSRETPIREDSSASIQLAGITGTTFIQISAGTGR 118
Query: 121 KKTIFQIATER 131
Sbjct: 119 PLEARPGEPVP 129
Score = 39.9 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 21/189 (11%), Positives = 64/189 (33%), Gaps = 2/189 (1%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + R G + + + T + +++ + N+
Sbjct: 120 LEARPGEPVPVIPSERTLVDQIVAGGAQALGRANLTFDNVNKILTDENIASVSATLKNLE 179
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL--MSKINNISALKENNSLFK 370
+ + + + +T++ + + +S +F E + + A + +
Sbjct: 180 IATAKLAADDGLLDQASTTLDEVSRAAAAFEQASVEFQEFGNSADASLADAAADLKIVVA 239
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
D + + T ++ + + ++ + + ++L+ +N FD L E
Sbjct: 240 DIRSVAQSASGTLDRSAEAVAAATAIIEGPATETFQNAGLASKELRIMLNRFDRFLRELE 299
Query: 431 RNPQDIVWG 439
NPQ ++ G
Sbjct: 300 SNPQSLLVG 308
>gi|170703433|ref|ZP_02894206.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
IOP40-10]
gi|170131664|gb|EDT00219.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
IOP40-10]
Length = 196
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 1 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 60 SAGVVVGRVKAIGFDSNTY-QALVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGD 118
Query: 120 EKK 122
+
Sbjct: 119 TEM 121
>gi|115350389|ref|YP_772228.1| hypothetical protein Bamb_0334 [Burkholderia ambifaria AMMD]
gi|115280377|gb|ABI85894.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
AMMD]
Length = 187
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 1 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 60 SAGVVVGRVKAIGFDSNTY-QALVTIDVDGQYPFPKDSSAKILTSGLLGEQYIGLDPGGD 118
Query: 120 EKK 122
+
Sbjct: 119 TEM 121
>gi|34495902|ref|NP_900117.1| ABC transporter substrate-binding protein [Chromobacterium
violaceum ATCC 12472]
gi|34101757|gb|AAQ58125.1| probable ABC transport system substrate-binding protein
[Chromobacterium violaceum ATCC 12472]
Length = 155
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 45/129 (34%), Gaps = 1/129 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV + F ++ V+ +V GL + V+
Sbjct: 1 MKRSTIDLWVGIFVALGIAAVVFLSLKVANLTPQSASQTYVVYADFDNVGGLKVKAPVKE 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + + I L +A+I T GL G YI L E
Sbjct: 61 AGVLVGRVSDIRLDPKTYR-ARVALNIDKQYQLSDDVSASILTSGLLGEQYIGLQQGGSE 119
Query: 121 KKTIFQIAT 129
Sbjct: 120 NNLAPGGTI 128
>gi|167579646|ref|ZP_02372520.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis TXDOH]
Length = 309
Score = 105 bits (259), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 102/282 (36%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++L ++YW + + +V GL D++VR+
Sbjct: 1 MENKSHAFWAGLFTIALLAAIVGAVYWFNVDRTV---RVPYDLVSRSNVTGLFPDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + + L+ P+ ST ++ QG+ GI +++L +
Sbjct: 58 RGLDVGKVQSIDFDRGHPGQIVIRILVDTHAPITRSTFGSLGFQGVTGIAFVQLDDTGAD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI--QKIIENIEKPLTT 178
+ A Q M + + + + S + + + ++ +
Sbjct: 118 LAPLPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPDMRDQLKATAAS 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ ++ + + +M T + H+ + N + +
Sbjct: 178 MQHAADGVTQLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASM 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + E + + + + V D T + +
Sbjct: 238 NDTLAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGR 279
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 11/173 (6%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ D L +K E +A N S + +
Sbjct: 125 AKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPDMRDQLKATAASMQHAADG 184
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKI 386
+ +E + + + + +S N + A + A +A+ + DT ++
Sbjct: 185 VTQLSRQVEPALAQMPQTMEHVNHALSAANALVAPGGPLVTNLNRAGQALASMNDTLAEL 244
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + L L + + D + RNP+ +++G
Sbjct: 245 SARVR----------YDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFG 287
>gi|317013232|gb|ADU83840.1| ABC transport system substrate binding protein [Helicobacter pylori
Lithuania75]
Length = 271
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 76/201 (37%), Gaps = 3/201 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++G G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGLMDRLSVDANQAMQEVMKAIKNVNKILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMM 201
A++ + L + + D ++
Sbjct: 178 ASVNDLIANLDSRKTQFDSLI 198
>gi|152981713|ref|YP_001354987.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Janthinobacterium sp.
Marseille]
gi|151281790|gb|ABR90200.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Janthinobacterium sp.
Marseille]
Length = 157
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K+ VGLFV+ FF + ++ ++ GL + V+
Sbjct: 1 MQRKSLDLWVGLFVLLGAAALFFLAMKAGNMSSLSFEQVYPVVTRFDNIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + I ++A I T GL G Y+ L
Sbjct: 61 AGVVVGRVADISFD-DKSYQATVTLNIESRYVFPKDSSAKILTSGLLGEQYVGLEPG 116
>gi|308272143|emb|CBX28750.1| hypothetical protein N47_L13480 [uncultured Desulfobacterium sp.]
Length = 147
Score = 104 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 3/117 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ ++ TSVG+F + L + L + V + SV GL S V
Sbjct: 1 MKKQSIETSVGIFFLIGLICVGYLTIKLGKMELLGDNTYTVKAKFK-SVSGLKQGSQVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +G I ++LD++ +L K I D L A+I+T GL G YI +S
Sbjct: 60 AGVKIGTIDNVYLDKDD--RALVKLKINKDIILTDDVIASIKTSGLIGDKYISISPG 114
>gi|218439978|ref|YP_002378307.1| hypothetical protein PCC7424_3037 [Cyanothece sp. PCC 7424]
gi|218172706|gb|ACK71439.1| Mammalian cell entry related domain protein [Cyanothece sp. PCC
7424]
Length = 479
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 53/423 (12%), Positives = 141/423 (33%), Gaps = 18/423 (4%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF + L WL + ++I+ +V GL + V++ G+ VGR+
Sbjct: 12 VGLFALLGLVIFGGITIWLRG-GNWGQQSYQIIVEF-DNVAGLQLGAPVQYRGVQVGRLA 69
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLR---KEKKTIF 125
L + A I D + T GL G I+++ + K++
Sbjct: 70 ALKPREN---KVEALLEISSTDLVIPRDVTIQTSRYGLIGEPAIDITPKTLLSPQAKSLS 126
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ E ++ T +++ + + + ++ +
Sbjct: 127 PLGEECKPDLILCDNTRIQGDSGGQLVETLTRLAQTYSNPEFFNNLNNAAKNASLTLKDV 186
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ V+ + + + + A+ L+ I E
Sbjct: 187 SKLSKDFSTLSKSAQREIALVSRNFEQTTTAATQTANDASLFINNANAVVLENRRDINEA 246
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK-------IDHLLSDFSSKMKSKETS 298
IQ ++ +S + + ++ ++ + ++ +S M + +T
Sbjct: 247 IQQTTLLMNNASQLIAENRQRISGAIESIDQMSDRLTLLATNLNQTALKINSTMDAADTE 306
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
++N+ +N + +RE+++ + I T++ + + + ++ S ++
Sbjct: 307 KMVQNLEVVLTNAAAVSQELREVSETLNDP-TIILTLQQTLDSARVTFENTQKITSDVDE 365
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
+ E S + + +S+ + + + ++ L ++ I+ L + +
Sbjct: 366 LVGDPEFRSNLRRLVNGLSNLVSSSQALEQQMIAVQ-KLDEQAKIIAQQIEPLTQDIYCA 424
Query: 419 VNH 421
V
Sbjct: 425 VEE 427
>gi|167835252|ref|ZP_02462135.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis MSMB43]
Length = 309
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 102/282 (36%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++L ++YW + P + +V GL D++VR+
Sbjct: 1 MENKSHAFWAGLFTIALLAAIVGAVYWFNVDRTVRAP---YDLVSRSNVTGLFPDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + + L+ + P+ ST ++ QG+ GI +++L +
Sbjct: 58 RGLDVGKVQSINFDRGHPGQIVIRILVDTNAPITRSTFGSLGFQGVTGIAFVQLDDTGAD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI--QKIIENIEKPLTT 178
+ A Q M + + + + S + ++ ++ +
Sbjct: 118 LAPLPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPEMRGQLKATAAS 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ I+ + + +M T + S N + +
Sbjct: 178 MQHAADGITQLSKQVEPALAQMPQTMAHVNRALGSANALVAPGGPLVANLNRAGQALASM 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + E + + + + V D T + +
Sbjct: 238 NDTLAELSARVRYDTLPRFNALATNVGDTSRTLKDVAGDVGR 279
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 49/173 (28%), Gaps = 11/173 (6%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ D L +K E +A N S + +
Sbjct: 125 AKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPEMRGQLKATAASMQHAADG 184
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKI 386
I +E + + + + N + A + A +A+ + DT ++
Sbjct: 185 ITQLSKQVEPALAQMPQTMAHVNRALGSANALVAPGGPLVANLNRAGQALASMNDTLAEL 244
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + L L + +T D + RNP+ +++G
Sbjct: 245 SARVR----------YDTLPRFNALATNVGDTSRTLKDVAGDVGRNPRSLLFG 287
>gi|222823163|ref|YP_002574736.1| ABC transporter, periplasmic substrate-binding protein
[Campylobacter lari RM2100]
gi|222538384|gb|ACM63485.1| putative ABC transporter, periplasmic substrate-binding protein
[Campylobacter lari RM2100]
Length = 275
Score = 104 bits (258), Expect = 3e-20, Method: Composition-based stats.
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 2/125 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G+FV + F S F I W + I + SV GLS + V+F
Sbjct: 1 MENRANYILIGIFVSILFFISLFFIVWYGNLKD-EKTFKYYEIFMEESVAGLSVKAPVKF 59
Query: 61 NGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG + + +D + + + T A+++ QG+ G +I+L+
Sbjct: 60 LGVDVGSVENISIDSSSNQLRVKILVKLDSNLVVKTDTYASLQIQGITGFKFIQLAGGSD 119
Query: 120 EKKTI 124
E +
Sbjct: 120 EASVL 124
>gi|242278701|ref|YP_002990830.1| mammalian cell entry related domain protein [Desulfovibrio
salexigens DSM 2638]
gi|242121595|gb|ACS79291.1| Mammalian cell entry related domain protein [Desulfovibrio
salexigens DSM 2638]
Length = 385
Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/449 (8%), Positives = 133/449 (29%), Gaps = 73/449 (16%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K +GLF++ F S+ + + + ++ + SV+GL S ++F
Sbjct: 1 MSRKTNPFRLGLFIIIGTI-LFVSVLAILGAGKIFEQSVKMETYLNESVNGLEVGSPIKF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + ++ L S + G + ++
Sbjct: 60 RGVKIGTVSQIGFVTDHY------------VDLKQSALRYVYLLGDLNHKMFKTKEGQEL 107
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +P++ +
Sbjct: 108 VHAL---------------------------------------KKEVDRGLRARPVSLGL 128
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + + + + + + + S+ ++ I+ +
Sbjct: 129 TGQLFLEIDYVDPVKNPPLEIAWKPKHIYVPSAPSMMSKVESAVASISDTLEDINKANIA 188
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ +E+++ + + D E ++ + + ++ + + E
Sbjct: 189 EAIEDVRSVAQSMSTFLKN-----SDTGEISKRLTGTLTEAEKFIARVNQLLADPEVDNL 243
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ ++A + N+R+ + + I ++ +S+ + +
Sbjct: 244 MPDVAAAARNLRTVMESSS-------------GDIVAAMKDIRKASESAKNVTGGMEEYL 290
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND---IQNLVRKLQE 417
+ + D ++ + S +I + L + + I+ ++ ++
Sbjct: 291 SGPKGKQTLADLSNTLNNISEASNRIKGAAARFESTLSRVNMTVAGQQGNIEAILDNVRR 350
Query: 418 TVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ + + N + P +++G
Sbjct: 351 LMENLRELSNEARQYPSGVLFGDPPKKAP 379
>gi|15646073|ref|NP_208255.1| hypothetical protein HP1464 [Helicobacter pylori 26695]
gi|254779976|ref|YP_003058083.1| ABC-type transport system, periplasmic component [Helicobacter
pylori B38]
gi|2314641|gb|AAD08505.1| conserved hypothetical secreted protein [Helicobacter pylori 26695]
gi|254001889|emb|CAX30139.1| ABC-type transport system, periplasmic component [Helicobacter
pylori B38]
Length = 271
Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI VG ++ + ++ +I+ + + + ++G G+ +
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKF 111
>gi|296284590|ref|ZP_06862588.1| ABC-type transport system periplasmic component [Citromicrobium
bathyomarinum JL354]
Length = 317
Score = 104 bits (257), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/316 (14%), Positives = 116/316 (36%), Gaps = 10/316 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG + +L I W++ + D E I SV GL+ SSV F
Sbjct: 1 METRANHVWVGAVTLLLLAALALFIVWIAGLGENDRK--EYDIFFKQSVAGLANGSSVSF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ + L + P + ++P+ P+ TTAT+++ T + +
Sbjct: 59 AGVPVGQVRDISLWETDPEFVRVRIAVKPEVPVLVGTTATVQSSFTGVSTILLDGARKGR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH-IQKIIENIEKPLTTT 179
+ +I G ++NA +++S + + ++ ++ L+
Sbjct: 119 PPITCETTACPEGAPVIPPKAGGFGEILANAPLLLERLSTLTERLTMLLSDDNQRELSGI 178
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ N ++ +A+ + + + + D + +
Sbjct: 179 LRNTNRVTADVADATPQLKGAL------AEMQITLREASEALDSFERTTNSANELLNNEG 232
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE-VGQKIDHLLSDFSSKMKSKETS 298
+ + ++ + +++D + T+ + ++ E + L D + +S +
Sbjct: 233 ESLAKELRGTLQKANQAADTLNQTLEQAQPAVRSLNEKTLPSANATLEDLQATSRSLRSL 292
Query: 299 AFLENIADSTSNMRSS 314
++ + S
Sbjct: 293 TQRIEDKGASDLINSP 308
>gi|210135631|ref|YP_002302070.1| ABC transporter substrate binding protein [Helicobacter pylori P12]
gi|210133599|gb|ACJ08590.1| ABC transporter substrate binding protein [Helicobacter pylori P12]
Length = 271
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI VG ++ + ++ +I+ + + + ++G G+ +
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKF 111
>gi|221199882|ref|ZP_03572925.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
multivorans CGD2M]
gi|221207450|ref|ZP_03580459.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
multivorans CGD2]
gi|221172653|gb|EEE05091.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
multivorans CGD2]
gi|221180121|gb|EEE12525.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
multivorans CGD2M]
Length = 309
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 109/289 (37%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + + +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTILLTLAIVGAVFWFNVDRTV---RVPYDLIARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQSIGFDRSHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + A I PS + S + +++ +++ + +++ + +
Sbjct: 115 GRDLSPLPSSPKAIAQIPMRPSLFDQLQSRGDVLLRQLELAAKSVNELM---SPEMREQL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ ++ + K + + ++ + +L K
Sbjct: 172 RATAESLQHAADGVTTLSKQLGPAVTALPETMTEVNRTMASANRLLQPNGPLVANLNKAG 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
E + + N+ +T+ + + +++ + +
Sbjct: 232 TAAEQVGTALNDLNARVQ--YDTLPRFNALAGSVGDASRQLKDVAGELG 278
Score = 40.3 bits (91), Expect = 0.61, Method: Composition-based stats.
Identities = 26/264 (9%), Positives = 64/264 (24%), Gaps = 24/264 (9%)
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ T +V N D + Q+ V
Sbjct: 26 FWFNVDRTVRVPYDLIARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRSHPGQIRIRILVD 85
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ + + +++ D S S + A + ++S
Sbjct: 86 HDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSPLPSSPKAIAQIPMRPSLFDQLQSRG 145
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
+ + K ++ + + + L +++ + +S +
Sbjct: 146 DVLLRQLELAAKSVNELMSP-EMREQLRATAESLQHAADGVTTLSK--QLGPAVTALPET 202
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSG--LNDIQNLVRKLQ----------------- 416
M T NR + G + N +++G + + L
Sbjct: 203 MTEVNRTMASANRLLQPNGPLVANLNKAGTAAEQVGTALNDLNARVQYDTLPRFNALAGS 262
Query: 417 --ETVNHFDDCLNNFERNPQDIVW 438
+ D RNP +++
Sbjct: 263 VGDASRQLKDVAGELGRNPSSLLF 286
>gi|254251298|ref|ZP_04944616.1| ABC-type transport system periplasmic component [Burkholderia
dolosa AUO158]
gi|124893907|gb|EAY67787.1| ABC-type transport system periplasmic component [Burkholderia
dolosa AUO158]
Length = 309
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/282 (14%), Positives = 100/282 (35%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGAVFWFNVDRTV---RVPYDLIARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L ++
Sbjct: 58 RGLDVGKVQSIGFDRSHPGQIRIRILVDQDAPITQSTYGSLGFQGVTGIAFVQLEDTGRD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH--IQKIIENIEKPLTT 178
+ + Q M + I ++ + ++ E + +
Sbjct: 118 LSPLPSSPKKIAQIPMRPSLFDQIQQRGGVLLRQLEQAAKGVNQLLSPEMREQLRATTES 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ ++T+ + ++ T + S NT + S Q
Sbjct: 178 LQHAADGVTTLSKQLGPAVAELPQTMHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQV 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + + + + V D + +
Sbjct: 238 GVALNDLNARVQYDTLPRFNALAGNVGDASRQLKDVAGELGR 279
Score = 39.5 bits (89), Expect = 0.98, Method: Composition-based stats.
Identities = 26/264 (9%), Positives = 65/264 (24%), Gaps = 24/264 (9%)
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ T +V N D + Q+ V
Sbjct: 26 FWFNVDRTVRVPYDLIARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRSHPGQIRIRILVD 85
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ + + +++ D S S + A + ++
Sbjct: 86 QDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSPLPSSPKKIAQIPMRPSLFDQIQQRG 145
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
+ +Q K ++ + + + L +++ + +S + + +
Sbjct: 146 GVLLRQLEQAAKGVNQLLSP-EMREQLRATTESLQHAADGVTTLSK--QLGPAVAELPQT 202
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSG---------------------LNDIQNLVRK 414
MH N + G + N +++G L L
Sbjct: 203 MHEVNRAMASANTLLQPNGPLVSNLNKAGTAAEQVGVALNDLNARVQYDTLPRFNALAGN 262
Query: 415 LQETVNHFDDCLNNFERNPQDIVW 438
+ + D RNP +++
Sbjct: 263 VGDASRQLKDVAGELGRNPSSLLF 286
>gi|311103420|ref|YP_003976273.1| Mce related family protein 1 [Achromobacter xylosoxidans A8]
gi|310758109|gb|ADP13558.1| Mce related family protein 1 [Achromobacter xylosoxidans A8]
Length = 165
Score = 104 bits (257), Expect = 4e-20, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 49/128 (38%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M + VGLFV+ F + + P + +V GL + V+
Sbjct: 1 MSREKTDFWVGLFVLLGAVALAFLALRAGNLSTFSFAPTYTLTANF-DNVGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ G+ D + ++ + T+A+I T GL G Y+ LS +
Sbjct: 60 SAGVVVGRVAGISFD-DKTFQAVVSVNLETAYQFPKDTSASILTSGLLGEQYLGLSAGSE 118
Query: 120 EKKTIFQI 127
E+
Sbjct: 119 EENFADGG 126
>gi|329905879|ref|ZP_08274262.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480]
gi|327547450|gb|EGF32271.1| ABC-type transport system [Oxalobacteraceae bacterium IMCC9480]
Length = 311
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ G+F +++L W +R + SV GL+ + VR+
Sbjct: 1 MENKSHALMAGIFTLALLVAGILLAMWFNRDRI---ERVPYEMATKLSVPGLNPQADVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D P L +RPDTP+ ST + QG+ GI Y++L +
Sbjct: 58 RGLDVGKVDEIIFDPNVPGQILVHISVRPDTPMTQSTYGVLGYQGVTGIAYVQLDDDGSK 117
Query: 121 KKTI 124
+
Sbjct: 118 PVKL 121
Score = 41.1 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 22/174 (12%), Positives = 54/174 (31%), Gaps = 8/174 (4%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ ++ +I+ S F + N + + I
Sbjct: 121 LTSSKQSLARIEMRPSLFDNLQTRGLVILQQTEALTLRLNRLLTPDNQAVMLGAFSDISK 180
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR-- 388
+E+I + L + + L ++ + A L D + ++ F + ++
Sbjct: 181 AAIALESIPARLEPTLSRLPALTTQASGTLAS--IQRLSDDTGKLVNNFSGMATRLQAPD 238
Query: 389 ----YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ + L + + I L + T++ + L F PQ I++
Sbjct: 239 GTLDRLALTVDQLGSVAGRIELKILPLGDEASSTLHAVNRTLETFNNRPQSILF 292
>gi|308062728|gb|ADO04616.1| ABC transport system substrate binding protein [Helicobacter pylori
Cuz20]
Length = 271
Score = 103 bits (256), Expect = 4e-20, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 75/201 (37%), Gaps = 3/201 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLEDGKYYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++G G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R ++ + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILLFKEGFMDRLSVDANQVMQEVMKAIKNVNKILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMM 201
+++ + L + D ++
Sbjct: 178 VSVDDLIANLDSRKVQFDSLI 198
>gi|15612422|ref|NP_224075.1| hypothetical protein jhp1357 [Helicobacter pylori J99]
gi|308183563|ref|YP_003927690.1| ABC transport system substrate binding protein [Helicobacter pylori
PeCan4]
gi|308185232|ref|YP_003929365.1| ABC transport system substrate binding protein [Helicobacter pylori
SJM180]
gi|4155969|gb|AAD06933.1| putative [Helicobacter pylori J99]
gi|307638117|gb|ADN80567.1| ABC transporter periplasmic substrate-binding protein [Helicobacter
pylori 908]
gi|308061152|gb|ADO03048.1| ABC transport system substrate binding protein [Helicobacter pylori
SJM180]
gi|308065748|gb|ADO07640.1| ABC transport system substrate binding protein [Helicobacter pylori
PeCan4]
gi|317014878|gb|ADU82314.1| ABC transport system substrate binding protein [Helicobacter pylori
Gambia94/24]
gi|325996717|gb|ADZ52122.1| ABC transport system substrate binding protein [Helicobacter pylori
2018]
Length = 271
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI VG ++ + ++ +I+ + + + ++G G+ +
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKF 111
>gi|297380680|gb|ADI35567.1| ABC transport system substrate binding protein [Helicobacter pylori
v225d]
Length = 271
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 29/201 (14%), Positives = 75/201 (37%), Gaps = 3/201 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLEDGKYYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG ++ + ++ +I+ + + + ++G G+ ++ L E
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ F + ++ +R +I + + + + + + + + +
Sbjct: 121 E---FYGSGDKGERILIFKEGFMDRLSVDANQVMQEVMKAIKNVNKILDDENVEKFKHIL 177
Query: 181 ANIETISTVLANNISHIDKMM 201
+++ + L + D ++
Sbjct: 178 VSVDDLIANLDSRKVQFDSLI 198
>gi|74317916|ref|YP_315656.1| putative ABC transporter substrate-binding protein [Thiobacillus
denitrificans ATCC 25259]
gi|74057411|gb|AAZ97851.1| putative ABC transporter substrate-binding protein [Thiobacillus
denitrificans ATCC 25259]
Length = 155
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VGLFV++ + F + + ++ +V GL + V+
Sbjct: 1 MNKTVLDLWVGLFVIAGIVALLFLALKVGSMSAVSASDTYEVVARFDNVGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D E + + ++A I T GL G YI L
Sbjct: 61 AGVVVGRVGEIRFDNESYEAA-VTLRLDKRYAFPKDSSAAIMTSGLLGEQYIGLEAG 116
>gi|94498320|ref|ZP_01304879.1| ABC transporter, periplasmic substrate-binding protein, putative
[Sphingomonas sp. SKA58]
gi|94422200|gb|EAT07242.1| ABC transporter, periplasmic substrate-binding protein, putative
[Sphingomonas sp. SKA58]
Length = 309
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 54/301 (17%), Positives = 109/301 (36%), Gaps = 11/301 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME Y VG +++L + + WL S I G V GLS V+F
Sbjct: 1 MERHANYALVGAASIALLIATLVFVVWLGGSA---KGSDSYQIVFHGPVRGLSVGGEVQF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I G+ LDQ PN + + TP+ + A+ +QG++G++ +++S
Sbjct: 58 NGIKVGEIGGIRLDQRDPNRVITDIELTRGTPVREDSVASSESQGISGVSIVQISAGTPS 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + +R +I + P+ ++ + +++ + K++ +
Sbjct: 118 KPLLK--TNDHGKRPVIPSKPNAMSSLLQGGGQVVASATEALSRVNKVLSDRNIANIGGA 175
Query: 181 ANIETISTVLANNISHIDKMMHTT------QVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
++T + + + + I
Sbjct: 176 IRDVRMTTAELAANRTMFAHAGSALAKLDRAADDIQGAASSVRQIADGDGKRAFADISQA 235
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + + E V + +S+D T+ ++ T T QE + +D L+ +
Sbjct: 236 ANELKSAVHEARGVIAKLDTQSADIGTTTIPNINATMLTLQETAESLDGLIRGIRQSPRE 295
Query: 295 K 295
Sbjct: 296 A 296
>gi|325527208|gb|EGD04597.1| mce related protein [Burkholderia sp. TJI49]
Length = 309
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 107/289 (37%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLIARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + A I PS + + +++ +++ +++ + +
Sbjct: 115 GRDLSPLPSSPKSIAQIPMRPSLFDQLQERGDVLLRQLELAAKSANQLM---SPEMREQL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ ++ + K + + + +L K
Sbjct: 172 RATAESMQHAADGVTTLSKQLGPAVAALPQTMHDVDRAMTSANTLLQPNGPLVSNLNKAG 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
E + V+ N+ +T+ + + +++ + +
Sbjct: 232 TAAEQVGVALNDLNARVQ--YDTLPRFNALAGSVSDASRQLKDVAGELG 278
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 39/159 (24%), Gaps = 11/159 (6%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D L ++ E +A N S + + + + + +
Sbjct: 139 DQLQERGDVLLRQLELAAKSANQLMSPEMREQLRATAESMQHAADGVTTLSKQLGPAVAA 198
Query: 342 LNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
L + M+ N + S A A +N +
Sbjct: 199 LPQTMHDVDRAMTSANTLLQPNGPLVSNLNKAGTAAEQVGVALNDLNARVQ--------- 249
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L L + + D RNP +++G
Sbjct: 250 -YDTLPRFNALAGSVSDASRQLKDVAGELGRNPSSLLFG 287
>gi|16329641|ref|NP_440369.1| hypothetical protein sll1002 [Synechocystis sp. PCC 6803]
gi|1652124|dbj|BAA17049.1| ycf22 [Synechocystis sp. PCC 6803]
Length = 456
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 64/436 (14%), Positives = 128/436 (29%), Gaps = 45/436 (10%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF + LF + WL + P EV+++ GL +VR+ G+PVGR+
Sbjct: 12 VGLFALLGLFIIGGIVLWLRG-GAFGNPGYEVLVQF-DDASGLQVGGAVRYRGVPVGRVA 69
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
L LA+ I + I GL G I++ R+ + I
Sbjct: 70 KLIPGSNG---ILAQLEISSTQLRIPADVQVEISRYGLLGEAAIDMIPDRQLSEAALAID 126
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
A + A E + T + +
Sbjct: 127 PLSADCAESDKILCDGDELEGQAGTQLTNSMARLAQAYSEPEFVADINATVKSANLAAAR 186
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ A + Q + D + L + + I I+
Sbjct: 187 IAAMSAEITALSKTANQQVRGFERTSEAIAKAADNASLLTSRVDQVVQTNQGYINRTIEE 246
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+S V + V T ++ + + + + + + + + +
Sbjct: 247 ASLLMVNLNQLVGENRAQFNLTLKSIETTNRDLQAIGQEIQTAVGTINHGLAAIDTQ--- 303
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+T++L + A + I IS + +L
Sbjct: 304 ----------------------------KVTNDLALLMENAAVTSNNIRQISNDLNDPTL 335
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + R T E + + + + N+++ LV L + V+ ++ +
Sbjct: 336 MLTLQQTLDAARLTFENAQKITSDVEQLTGD--PAFRNNLRKLVDGLGQLVSSTENLQDR 393
Query: 429 ------FERNPQDIVW 438
ER+ Q + +
Sbjct: 394 VYTAHTLERSGQQLRF 409
>gi|172061851|ref|YP_001809503.1| hypothetical protein BamMC406_2810 [Burkholderia ambifaria MC40-6]
gi|171994368|gb|ACB65287.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MC40-6]
Length = 311
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 103/282 (36%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L ++
Sbjct: 58 RGLDVGKVQSIGFDRTHPGQIRIRILVDRDAPITQSTYGSLGFQGVTGIAFVQLEDTGRD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR--HIQKIIENIEKPLTT 178
+ Q M + I ++ ++S+ ++ E + +
Sbjct: 118 LAPLPSSPKSIAQIPMRPSLFDQIQERGDVLLRQLEQAAESANALMSPEMREQLRATAES 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ +T+ + + T + S NT + S + Q
Sbjct: 178 LQHAADGAATLSKQLAPAVAALPQTMHQVDRAMASANTLLQPNGPLVSNLNKAGSAAEQV 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + + + + ++V D + +
Sbjct: 238 GVALNDLNARVQYDTLPRFNTLADSVGDASRQLKDVAGELGR 279
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 17/169 (10%), Positives = 47/169 (27%), Gaps = 2/169 (1%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ + +I S F + + A ++N S ++ + +
Sbjct: 121 LPSSPKSIAQIPMRPSLFDQIQERGDVLLRQLEQAAESANALMSPEMREQLRATAESLQH 180
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ ++ L + + M +++ A L + + +
Sbjct: 181 AADGAATLSKQLAPAVAALPQTMHQVDRAMASANT--LLQPNGPLVSNLNKAGSAAEQVG 238
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ + L L + + D RNP +++G
Sbjct: 239 VALNDLNARVQYDTLPRFNTLADSVGDASRQLKDVAGELGRNPSSLLFG 287
>gi|187925541|ref|YP_001897183.1| hypothetical protein Bphyt_3569 [Burkholderia phytofirmans PsJN]
gi|187716735|gb|ACD17959.1| Mammalian cell entry related domain protein [Burkholderia
phytofirmans PsJN]
Length = 186
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 43/117 (36%), Gaps = 3/117 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ VGLFVV F + P V ++ ++ GL + V+
Sbjct: 3 KTAALDFWVGLFVVLGFVALLFLALKAGNMSSLSFQPTYPVKLKF-DNIGGLKARAPVKS 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D +L + T+A I T GL G YI L
Sbjct: 62 AGVTVGRVASIGFDSNAY-QALVTIDLDKQYQFPKDTSAKILTSGLLGEQYIGLEPG 117
>gi|115352999|ref|YP_774838.1| hypothetical protein Bamb_2948 [Burkholderia ambifaria AMMD]
gi|115282987|gb|ABI88504.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
AMMD]
Length = 310
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 103/282 (36%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L ++
Sbjct: 58 RGLDVGKVQSIGFDRTHPGQIRIRILVDRDAPITQSTYGSLGFQGVTGIAFVQLEDTGRD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR--HIQKIIENIEKPLTT 178
+ Q M + I ++ ++S+ ++ E + +
Sbjct: 118 LAPLPSSPKSIAQIPMRPSLFDQIQERGDVLLRQLEQAAESANALMSPEMREQLRATAES 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ +T+ + + T + S NT + S + Q
Sbjct: 178 LQHAADGAATLSKQLAPAVAALPQTMHQVDRAMASANTLLQPNGPLVSNLNKAGSAAEQV 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + + + + ++V D + +
Sbjct: 238 GVALNDLNARVQYDTLPRFNTLADSVGDASRQLKDVAGELGR 279
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 17/169 (10%), Positives = 47/169 (27%), Gaps = 2/169 (1%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ + +I S F + + A ++N S ++ + +
Sbjct: 121 LPSSPKSIAQIPMRPSLFDQIQERGDVLLRQLEQAAESANALMSPEMREQLRATAESLQH 180
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ ++ L + + M +++ A L + + +
Sbjct: 181 AADGAATLSKQLAPAVAALPQTMHQVDRAMASANT--LLQPNGPLVSNLNKAGSAAEQVG 238
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ + L L + + D RNP +++G
Sbjct: 239 VALNDLNARVQYDTLPRFNTLADSVGDASRQLKDVAGELGRNPSSLLFG 287
>gi|171322066|ref|ZP_02910938.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MEX-5]
gi|171092628|gb|EDT37932.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MEX-5]
Length = 311
Score = 103 bits (256), Expect = 5e-20, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 104/282 (36%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L ++
Sbjct: 58 RGLDVGKVQSIGFDRTHPGQIRIRILVDRDAPITQSTYGSLGFQGVTGIAFVQLEDTGRD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR--HIQKIIENIEKPLTT 178
+ Q M + I ++ ++S+ ++ E + +
Sbjct: 118 LAPLPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLEQAAESANALMSPEMREQLRATAES 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ +T+ + + T + S NT + S + Q
Sbjct: 178 LQHAADGAATLSKQLAPAVAALPQTMHEVNRAMASANTLLQPNGPLVSNLNKAGSAAEQV 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + + + + ++V D + + +
Sbjct: 238 GVALNDLNSRVQYDTLPRFNALASSVGDASQQLKDVAGELGR 279
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 18/169 (10%), Positives = 47/169 (27%), Gaps = 2/169 (1%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ + +I S F + + A ++N S ++ + +
Sbjct: 121 LPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLEQAAESANALMSPEMREQLRATAESLQH 180
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ ++ L + + M ++N A L + + +
Sbjct: 181 AADGAATLSKQLAPAVAALPQTMHEVNRAMASANT--LLQPNGPLVSNLNKAGSAAEQVG 238
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ + L L + + D RNP +++G
Sbjct: 239 VALNDLNSRVQYDTLPRFNALASSVGDASQQLKDVAGELGRNPSSLLFG 287
>gi|261840138|gb|ACX99903.1| ABC transport system substrate binding protein [Helicobacter pylori
52]
Length = 271
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI VG ++ + ++ +I+ + + + ++G G+ +
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKF 111
Score = 44.9 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 13/136 (9%), Positives = 45/136 (33%), Gaps = 2/136 (1%)
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ + S + + + +L++ ++ S
Sbjct: 135 FKEGLMDRLSGDANQAVQEVMKAIKNVNRILDDENVEKFKHILASIDDLIANLD--SRKV 192
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ ++L K+A + + + + +++ + + + + Q +R + V
Sbjct: 193 QFDALIKNANNLVSSANNVALNVDKRLKEGQYDFKAMFTPLIMQAQLSLRNIDNFVEKGS 252
Query: 424 DCLNNFERNPQDIVWG 439
++ F+ NP ++G
Sbjct: 253 ALIDKFDANPYKTIFG 268
>gi|319761113|ref|YP_004125050.1| mammalian cell entry related domain protein [Alicycliphilus
denitrificans BC]
gi|330822971|ref|YP_004386274.1| Mammalian cell entry related domain-containing protein
[Alicycliphilus denitrificans K601]
gi|317115674|gb|ADU98162.1| Mammalian cell entry related domain protein [Alicycliphilus
denitrificans BC]
gi|329308343|gb|AEB82758.1| Mammalian cell entry related domain protein [Alicycliphilus
denitrificans K601]
Length = 325
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 73/183 (39%), Gaps = 6/183 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FV+ + WL+R + SV GL + VR+
Sbjct: 1 MENKSHALAAGIFVIVVAALLAGLGMWLTRDQ---TAYQIYELSSKDSVSGLQPQAPVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D E P + L + + P+ +T AT+ QG+ G+ +++L
Sbjct: 58 KGVAVGKVTRIGFDPEAPGNVLIRIAVNTTAPISTTTFATLGYQGVTGLAHVQLDDADA- 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ Q A + + S + ++ ++ I ++ + + T
Sbjct: 117 --PLPQPAPGASGLPRLPLQTSTFSQVAEQGPAIMAQVQQATERINTLLGDENQQRFATA 174
Query: 181 ANI 183
Sbjct: 175 LQQ 177
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 17/182 (9%), Positives = 51/182 (28%), Gaps = 5/182 (2%)
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
++ + + + ++ ++ + + F + + S
Sbjct: 129 PRLPLQTSTFSQVAEQGPAIMAQVQQATERINTLLGDENQQRFATALQQLGAAAGSIDQL 188
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
+R + + + + D+ Q L ++ + + + A RA++
Sbjct: 189 VRHLDNTVSTRLDPALAGVPALTQ--DAQQTLHALRQAGSSAAGAADE---VRQAVRALN 243
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I S+ F + L + + NPQ ++
Sbjct: 244 AEGGALAEIASGAKSLTTAADRFGRVTLPSLNRAADETARAARRLGRTATGINDNPQSLI 303
Query: 438 WG 439
+G
Sbjct: 304 YG 305
>gi|134279684|ref|ZP_01766396.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 305]
gi|167736873|ref|ZP_02409647.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 14]
gi|134248884|gb|EBA48966.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 305]
Length = 309
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/289 (14%), Positives = 105/289 (36%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++L ++YW + + +V GL D++VR+
Sbjct: 1 MENKSHAFWAGLFTIALLGAIVGAVYWFNVDRTV---RVPYDLVSRSNVTGLFPDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + + L+ + P+ ST ++ QG+ GI +++L +
Sbjct: 58 RGLDVGKVQSINFDRGHPGQIVIRILVDTNAPITRSTFGSLGFQGVTGIAFVQLDDTGAD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A A I PS + + K++ +++ + E + + +
Sbjct: 118 LAPLPTSAK---AVAQIPMRPSLFDQLQQRGDVLLKQMEIAAK---SVNEMLSPAMRDQL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ ++ + + + + + +L +
Sbjct: 172 KATAASMQHAADGVTQLSRQVEPALARMPQTMEHVNRALSSANALVAPGGPLVANLNRAG 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q L ++ + +T+ + + + + D
Sbjct: 232 QALASMNDTLAELSARVR--YDTLPRFNALATNVGDASRTLKDVAGDVG 278
Score = 44.2 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 51/173 (29%), Gaps = 11/173 (6%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ D L +K E +A N S + + +
Sbjct: 125 AKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPAMRDQLKATAASMQHAADG 184
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKI 386
+ +E + + + + +S N + A + A +A+ + DT ++
Sbjct: 185 VTQLSRQVEPALARMPQTMEHVNRALSSANALVAPGGPLVANLNRAGQALASMNDTLAEL 244
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + L L + + D + RNP+ +++G
Sbjct: 245 SARVR----------YDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFG 287
>gi|221069467|ref|ZP_03545572.1| Mammalian cell entry related domain protein [Comamonas testosteroni
KF-1]
gi|220714490|gb|EED69858.1| Mammalian cell entry related domain protein [Comamonas testosteroni
KF-1]
Length = 315
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FV+ + WL+R N+ + V GL ++VR+
Sbjct: 1 MENKSHAMAAGIFVLVVAALLAGLAVWLTRDNR---EYQLYEMSTKDGVSGLQPQATVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++V + D + P + L + + DTP+ P+T A + QG+ G+ +I+L +
Sbjct: 58 KGVPVGKVVRIGFDPQIPGNVLIRIAVGEDTPVTPATYAQLGYQGVTGLAHIQLDDDSRA 117
Query: 121 KKTIFQIA 128
+ +
Sbjct: 118 SQPLKPGP 125
Score = 41.5 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 20/214 (9%), Positives = 61/214 (28%), Gaps = 12/214 (5%)
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ Q V + + + + + + + + + LL
Sbjct: 92 PATYAQLGYQGVTGLAHIQLDDDSRASQPLKPGPSGLPRLPMKSSPLNMLADQGPVLLER 151
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ +N ++ + + +A I D + + T +T++ + + Q
Sbjct: 152 VDEISRRLNAMLGEDNQKRVSAALDNIAAASGGIKDLAETMNKTAKDFPQLTADAHQTLQ 211
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDT---SEKINRYIPSIGNNLQNFSQSG 404
+ + + D Q+ + ++I ++ ++ +S
Sbjct: 212 SLTKAGNA---------ATGVATDLQQTVRKVNAPDGPLQQIAEGTQALSQAAESLGRST 262
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
L + + F NPQ +++
Sbjct: 263 LPRMNGAADDVSRAARTMGAAAGRFNDNPQSVIY 296
>gi|161523585|ref|YP_001578597.1| hypothetical protein Bmul_0405 [Burkholderia multivorans ATCC
17616]
gi|189351645|ref|YP_001947273.1| putative ABC transporter substrate-binding protein [Burkholderia
multivorans ATCC 17616]
gi|221211090|ref|ZP_03584069.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
multivorans CGD1]
gi|160341014|gb|ABX14100.1| Mammalian cell entry related domain protein [Burkholderia
multivorans ATCC 17616]
gi|189335667|dbj|BAG44737.1| putative ABC transport system substrate-binding protein
[Burkholderia multivorans ATCC 17616]
gi|221168451|gb|EEE00919.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
multivorans CGD1]
Length = 309
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 79/176 (44%), Gaps = 6/176 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + + +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTILLTLAIVGAVFWFNVDRTV---RVPYDLIARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQSIGFDRSHPGQIRIRILVDQDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + A I PS + S + +++ +++ + +++ +
Sbjct: 115 GRDLSPLPSSPKAIAQIPMRPSLFDQLQSRGDVLLRQLELAAKSVNELMSPEMREQ 170
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 27/264 (10%), Positives = 65/264 (24%), Gaps = 24/264 (9%)
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ T +V N D + Q+ V
Sbjct: 26 FWFNVDRTVRVPYDLIARTNVTGLFPDAAVRFRGLDVGKVQSIGFDRSHPGQIRIRILVD 85
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ + + +++ D S S + A + ++S
Sbjct: 86 QDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSPLPSSPKAIAQIPMRPSLFDQLQSRG 145
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
+ + K ++ + + + L +++ + +S +
Sbjct: 146 DVLLRQLELAAKSVNELMSP-EMREQLRATAESLQHAADGVTTLSK--QLGPAVTALPET 202
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSG--LNDIQNLVRKLQ----------------- 416
M T NR + G + N +++G + + L
Sbjct: 203 MTEVNRTMASANRLLQPNGPLVANLNKAGTAAEQVGTALNDLNARVQYDTLPRFNALAGS 262
Query: 417 --ETVNHFDDCLNNFERNPQDIVW 438
+ F D RNP +++
Sbjct: 263 VGDASRQFKDVAGELGRNPSSLLF 286
>gi|325519292|gb|EGC98731.1| hypothetical protein B1M_40158 [Burkholderia sp. TJI49]
Length = 159
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYAVRMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKSIGFDTNTY-QALVTIDLDGQYQFPKDSSAKILTSGLLGEQYIGLEPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|53718043|ref|YP_107029.1| mce related protein [Burkholderia pseudomallei K96243]
gi|53724607|ref|YP_101913.1| ABC transporter periplasmic substrate-binding protein [Burkholderia
mallei ATCC 23344]
gi|67642418|ref|ZP_00441175.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei GB8 horse 4]
gi|76812149|ref|YP_332028.1| ABC transporter periplasmic substrate-binding protein [Burkholderia
pseudomallei 1710b]
gi|121600461|ref|YP_991581.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei SAVP1]
gi|124386612|ref|YP_001027346.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei NCTC 10229]
gi|126439252|ref|YP_001057486.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 668]
gi|126448984|ref|YP_001082716.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei NCTC 10247]
gi|126454456|ref|YP_001064735.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1106a]
gi|167004398|ref|ZP_02270156.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei PRL-20]
gi|167717854|ref|ZP_02401090.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei DM98]
gi|167813978|ref|ZP_02445658.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 91]
gi|167822499|ref|ZP_02453970.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 9]
gi|167844080|ref|ZP_02469588.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei B7210]
gi|167892584|ref|ZP_02479986.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 7894]
gi|167901081|ref|ZP_02488286.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei NCTC 13177]
gi|167909301|ref|ZP_02496392.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 112]
gi|167917333|ref|ZP_02504424.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei BCC215]
gi|217419794|ref|ZP_03451300.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 576]
gi|226193726|ref|ZP_03789329.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei Pakistan 9]
gi|237810637|ref|YP_002895088.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei MSHR346]
gi|242314483|ref|ZP_04813499.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1106b]
gi|254176977|ref|ZP_04883634.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei ATCC 10399]
gi|254181996|ref|ZP_04888593.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1655]
gi|254187925|ref|ZP_04894437.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei Pasteur 52237]
gi|254196753|ref|ZP_04903177.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei S13]
gi|254202026|ref|ZP_04908390.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei FMH]
gi|254207357|ref|ZP_04913708.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei JHU]
gi|254261934|ref|ZP_04952988.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1710a]
gi|254295955|ref|ZP_04963412.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 406e]
gi|254357614|ref|ZP_04973888.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei 2002721280]
gi|52208457|emb|CAH34391.1| mce related protein [Burkholderia pseudomallei K96243]
gi|52428030|gb|AAU48623.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei ATCC 23344]
gi|76581602|gb|ABA51077.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1710b]
gi|121229271|gb|ABM51789.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei SAVP1]
gi|124294632|gb|ABN03901.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei NCTC 10229]
gi|126218745|gb|ABN82251.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 668]
gi|126228098|gb|ABN91638.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1106a]
gi|126241854|gb|ABO04947.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei NCTC 10247]
gi|147747920|gb|EDK54996.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei FMH]
gi|147752899|gb|EDK59965.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei JHU]
gi|148026678|gb|EDK84763.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei 2002721280]
gi|157805734|gb|EDO82904.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 406e]
gi|157935605|gb|EDO91275.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei Pasteur 52237]
gi|160698018|gb|EDP87988.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei ATCC 10399]
gi|169653496|gb|EDS86189.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei S13]
gi|184212534|gb|EDU09577.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1655]
gi|217397098|gb|EEC37114.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 576]
gi|225934304|gb|EEH30288.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei Pakistan 9]
gi|237503443|gb|ACQ95761.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei MSHR346]
gi|238523567|gb|EEP87005.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei GB8 horse 4]
gi|242137722|gb|EES24124.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1106b]
gi|243060280|gb|EES42466.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei PRL-20]
gi|254220623|gb|EET10007.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1710a]
Length = 309
Score = 103 bits (255), Expect = 6e-20, Method: Composition-based stats.
Identities = 41/282 (14%), Positives = 103/282 (36%), Gaps = 5/282 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++L ++YW + + +V GL D++VR+
Sbjct: 1 MENKSHAFWAGLFTIALLGAIVGAVYWFNVDRTV---RVPYDLVSRSNVTGLFPDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + + L+ + P+ ST ++ QG+ GI +++L +
Sbjct: 58 RGLDVGKVQSINFDRGHPGQIVIRILVDTNAPITRSTFGSLGFQGVTGIAFVQLDDTGAD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI--QKIIENIEKPLTT 178
+ A Q M + + + + S + ++ + ++ +
Sbjct: 118 LAPLPTSAKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPEMRDQLKATAAS 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ ++ + + +M T + + S N + +
Sbjct: 178 MQHAADGVTQLSRQVEPALARMPQTMEHVNRALSSANALVAPGGPLVANLNRAGQALASM 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + E + + + + V D T + +
Sbjct: 238 NDTLAELSARVRYDTLPRFNALATNVGDASRTLKDVAGDVGR 279
Score = 44.9 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 50/173 (28%), Gaps = 11/173 (6%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ D L +K E +A N S + +
Sbjct: 125 AKAVAQIPMRPSLFDQLQQRGDVLLKQMEIAAKSVNEMLSPEMRDQLKATAASMQHAADG 184
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKI 386
+ +E + + + + +S N + A + A +A+ + DT ++
Sbjct: 185 VTQLSRQVEPALARMPQTMEHVNRALSSANALVAPGGPLVANLNRAGQALASMNDTLAEL 244
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + L L + + D + RNP+ +++G
Sbjct: 245 SARVR----------YDTLPRFNALATNVGDASRTLKDVAGDVGRNPRSLLFG 287
>gi|91786143|ref|YP_547095.1| hypothetical protein Bpro_0232 [Polaromonas sp. JS666]
gi|91695368|gb|ABE42197.1| Mammalian cell entry related protein [Polaromonas sp. JS666]
Length = 310
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + + G FV+ + WL+R N + SV GL ++VRF
Sbjct: 1 MENKAHAMAAGAFVLVVTALLVMLAVWLTRDN---TQRNLYEMSTGESVSGLQPQAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ + D + + L + I P+ ST AT+ +QG+ G+ +I+L
Sbjct: 58 RGVPVGKVELIGFDTKVKGNVLIRVSIDRSAPVTKSTFATVASQGVTGLGFIQLDDDGSS 117
Query: 121 KKTIFQIATERNQRA 135
+ + + +
Sbjct: 118 PERLVPNDEDPPRIP 132
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 15/137 (10%), Positives = 45/137 (32%), Gaps = 8/137 (5%)
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-----NNISALKE 364
S+ + + + S I + ++N ++ ++ + + LK
Sbjct: 153 EQASTRLNKLLSDENQAAVTSAITQLGEAAGSINRVARGLEPTVATLPGLSRDATVTLKS 212
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIP---SIGNNLQNFSQSGLNDIQNLVRKLQETVNH 421
+ D +++ ++ ++ FS L + + + T+
Sbjct: 213 VKTAADDVSTTATRLNAKGGTLDKLSDGGTALAAGVETFSAGTLPKLGEVADETARTMRQ 272
Query: 422 FDDCLNNFERNPQDIVW 438
+N + NPQ +++
Sbjct: 273 LRRTVNAVDDNPQSLIF 289
>gi|206558709|ref|YP_002229469.1| hypothetical protein BCAL0303 [Burkholderia cenocepacia J2315]
gi|198034746|emb|CAR50613.1| putative membrane protein [Burkholderia cenocepacia J2315]
Length = 186
Score = 103 bits (255), Expect = 7e-20, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 61
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 62 SAGVVVGRVKSIGFDTNTY-QALVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGD 120
Query: 120 EKK 122
+
Sbjct: 121 TEM 123
>gi|121998897|ref|YP_001003684.1| hypothetical protein Hhal_2118 [Halorhodospira halophila SL1]
gi|121590302|gb|ABM62882.1| Mammalian cell entry related domain protein [Halorhodospira
halophila SL1]
Length = 151
Score = 103 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG+FV L +S + P + +V GL + V
Sbjct: 1 MSQRLVEIWVGVFVAIGLAAMMVLALQVSGLTELRQPPGYYVTAKFDNVGGLREKAPVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD E + + + I + + A I T GL G Y+ L +
Sbjct: 61 AGVRVGRVEEIRLDPES-HQAEVRLRINERFGAIPADSAAAIYTAGLLGEQYVGLEPGWE 119
>gi|107023831|ref|YP_622158.1| hypothetical protein Bcen_2284 [Burkholderia cenocepacia AU 1054]
gi|116690917|ref|YP_836540.1| hypothetical protein Bcen2424_2899 [Burkholderia cenocepacia
HI2424]
gi|254247080|ref|ZP_04940401.1| Mce4/Rv3499c/MTV023.06c protein [Burkholderia cenocepacia PC184]
gi|105894020|gb|ABF77185.1| Mammalian cell entry related protein [Burkholderia cenocepacia AU
1054]
gi|116649006|gb|ABK09647.1| Mammalian cell entry related domain protein [Burkholderia
cenocepacia HI2424]
gi|124871856|gb|EAY63572.1| Mce4/Rv3499c/MTV023.06c protein [Burkholderia cenocepacia PC184]
Length = 309
Score = 103 bits (254), Expect = 8e-20, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + A I PS + + +++ +++ ++ +
Sbjct: 115 GRDLSPLPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQ 170
Score = 41.1 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 22/226 (9%), Positives = 56/226 (24%), Gaps = 2/226 (0%)
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
K ++ +D + + + +
Sbjct: 64 KVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSPLPS 123
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ +I S F + + +A ++N S ++ + + +
Sbjct: 124 SPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQLRATAESLQHAAD 183
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+T L + E M ++N A L + + + ++
Sbjct: 184 GAATLTKQLGPAVTALPETMHEVNRAMASANT--LLQPNGPLVSNLNKAGTAAEQVGVAL 241
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L L + + D RNP+ +++G
Sbjct: 242 NGLNARVQYDTLPRFNALADSVGDASRQLKDVAGELGRNPRSLLFG 287
>gi|159028612|emb|CAO90615.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 458
Score = 103 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 51/431 (11%), Positives = 133/431 (30%), Gaps = 24/431 (5%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+GL +++ + + WLS + + G P +V G+ + V + G+ +G++
Sbjct: 19 IGLMLLASGGILIWFVTWLSNFS-FGGRSYRASFLFP-NVGGMMVGTRVGYRGVRIGQVT 76
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + E + I P D + ++ GL G T I+++ A
Sbjct: 77 AITPEPEG---VAVEVEISPADRLIPSNSLIEAIQSGLVGETTIDITP---------LQA 124
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+P+ I + + S + + L + + +
Sbjct: 125 LPVGGVKEPPLSPNCNGEVIICNGSRLQGQSALNVNTLIRSLLRISNLVSDPDMVAGFRS 184
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ + + + + T+ + + + + + L +
Sbjct: 185 FTQRAANALGGLDRFSGEATTALSEVRRSGTLGKVNSGMRSLESLPQVSGSLDRLSSDLS 244
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + ++ ++ + + LL + + + +N +T
Sbjct: 245 GVGGLSQEATTLLRSLQGSGGLRNLDATLVEARKTLLLVGETTEELRVFLGANQNRLIAT 304
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + S + T I T I NLN S +L + N +A + +
Sbjct: 305 LDSIKTTSDRLQTTLAALDPILTQVQKSQIIDNLNTISANAVKLSENLGNFTAYLSDPAT 364
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + + R + + + N L +++ + +++
Sbjct: 365 VVTLQQLLDSSRAAFANLQKITSDVDEITGN---------PQLRQEIIRLIQGLSRLVSS 415
Query: 429 FERNPQDIVWG 439
E+ Q+ G
Sbjct: 416 SEQLQQEFAQG 426
>gi|170734242|ref|YP_001766189.1| hypothetical protein Bcenmc03_2908 [Burkholderia cenocepacia MC0-3]
gi|169817484|gb|ACA92067.1| Mammalian cell entry related domain protein [Burkholderia
cenocepacia MC0-3]
Length = 309
Score = 103 bits (254), Expect = 9e-20, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + A I PS + + +++ +++ ++ +
Sbjct: 115 GRDLAPLPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQ 170
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 22/226 (9%), Positives = 56/226 (24%), Gaps = 2/226 (0%)
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
K ++ +D + + + +
Sbjct: 64 KVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLAPLPS 123
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ +I S F + + +A ++N S ++ + + +
Sbjct: 124 SPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQLRATAESLQHAAD 183
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+T L + E M ++N A L + + + ++
Sbjct: 184 GAATLTKQLGPAVTALPETMHEVNRAMASANT--LLQPNGPLVSNLNKAGTAAEQVGVAL 241
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L L + + D RNP+ +++G
Sbjct: 242 NGLNARVQYDTLPRFNALADSVGDASRQLKDVAGELGRNPRSLLFG 287
>gi|30249903|ref|NP_841973.1| mce related protein [Nitrosomonas europaea ATCC 19718]
gi|30180940|emb|CAD85866.1| mce related protein [Nitrosomonas europaea ATCC 19718]
Length = 301
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/288 (15%), Positives = 115/288 (39%), Gaps = 10/288 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + + GLF++ + + ++ W SR + ++ G+V GL+ ++SVR+
Sbjct: 1 MENRAHALAAGLFILLLGVATVMAVKWFSRDSV--SYNHYFLVSAGGAVSGLNPEASVRY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ ++ D+E + + + + + L A + +QG+ G+TYIEL+
Sbjct: 59 RGVNVGKVEEIYFDRENIRNIIVRIAVNHNVVLPGDIYAQLASQGITGLTYIELND---- 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
E P + + +++ + + +S+ I++I + + T I
Sbjct: 115 ----DVADAETKPLQNEARIPLRSSLIKTLSDSLEEILKNSNMAIRQISNLLNEQNQTHI 170
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++I + + + + T S+ T + L +
Sbjct: 171 SSILSHLEQAVQHYDTLTGQLQKGLQTLPQLSSELTSTFKQTRQVMENTSQVLQKLNQQQ 230
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+++N+ S ++ + T + ++ ++ ++
Sbjct: 231 GLVDNLTQGSLEMTRTLTSLNETGVAITQSAHKLDQLLNLLEDHPQSL 278
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 4/135 (2%)
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
SNM + + I S ++ +E + + + + + + + +S E S
Sbjct: 150 NSNMAIRQISNLLNEQNQTHISSILSHLEQAVQHYDTLTGQLQKGLQTLPQLS--SELTS 207
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ--SGLNDIQNLVRKLQETVNHFDDC 425
FK ++ M +K+N+ + N Q + L + + ++ + D
Sbjct: 208 TFKQTRQVMENTSQVLQKLNQQQGLVDNLTQGSLEMTRTLTSLNETGVAITQSAHKLDQL 267
Query: 426 LNNFERNPQDIVWGR 440
LN E +PQ +V+G+
Sbjct: 268 LNLLEDHPQSLVFGK 282
>gi|85707663|ref|ZP_01038729.1| ABC-type transport system periplasmic component [Erythrobacter sp.
NAP1]
gi|85689197|gb|EAQ29200.1| ABC-type transport system periplasmic component [Erythrobacter sp.
NAP1]
Length = 315
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 90/301 (29%), Gaps = 12/301 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG +++L I W++R NQ D E I SV GL+ S V +
Sbjct: 1 METRANHLWVGAVTLALLAAMAAFIVWIARLNQGDVN--EYDIFYAQSVSGLAQGSQVAY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ----------GLAGIT 110
G+PVG++V + L ++ P + +R + P+ TTATI++ G G
Sbjct: 59 AGVPVGQVVDIALSEDDPEFVRVRIRVRDEVPILIGTTATIQSSFTGVSTILLDGARGGA 118
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ I + + + ++ +
Sbjct: 119 PAITCDTTACPEGRPVIPPKDGGINALLNNAPLLLERLATLTENLNILLGPENQDNLRGI 178
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
T I + + +++T I L +
Sbjct: 179 LANSNRLTNELADAAPRLEGTFAEFEIALREAGEALDAFETATRSTDQLINQEGPLLAEE 238
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
++ + + T+ T + + + + + +
Sbjct: 239 LRGTLRSANEAAAALAATLEDTRPAARQLREGTLPAAEATLRDLRSTSRSLRAITEQIET 298
Query: 291 K 291
+
Sbjct: 299 Q 299
>gi|206559097|ref|YP_002229857.1| mce related protein [Burkholderia cenocepacia J2315]
gi|198035134|emb|CAR51008.1| mce related protein [Burkholderia cenocepacia J2315]
Length = 309
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 41/289 (14%), Positives = 105/289 (36%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + A I PS + + +++ +++ ++ + +
Sbjct: 115 GRDLSPLPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALM---SPEMREQL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ + + K + + + + +L K
Sbjct: 172 RATAESLQHAADGAATLTKQLGPAVTALPETMHEVNRAMASANTLMQPNGPLVSNLNKAG 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
E + V+ N +T+ + + +++ + +
Sbjct: 232 TAAEQVGVALNGLNARVQ--YDTLPRFNALADSVGDASRQLKDVAGELG 278
Score = 41.1 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 22/226 (9%), Positives = 56/226 (24%), Gaps = 2/226 (0%)
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
K ++ +D + + + +
Sbjct: 64 KVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLSPLPS 123
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ +I S F + + +A ++N S ++ + + +
Sbjct: 124 SPKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQLRATAESLQHAAD 183
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+T L + E M ++N A L + + + ++
Sbjct: 184 GAATLTKQLGPAVTALPETMHEVNRAMASANT--LMQPNGPLVSNLNKAGTAAEQVGVAL 241
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L L + + D RNP+ +++G
Sbjct: 242 NGLNARVQYDTLPRFNALADSVGDASRQLKDVAGELGRNPRSLLFG 287
>gi|78067710|ref|YP_370479.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
sp. 383]
gi|77968455|gb|ABB09835.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
sp. 383]
Length = 309
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 77/176 (43%), Gaps = 6/176 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQSIGFDRSHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + A I PS + + +++ +++ ++ +
Sbjct: 115 GRDLAPLPSSTKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQ 170
Score = 40.7 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 22/226 (9%), Positives = 56/226 (24%), Gaps = 2/226 (0%)
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
K ++ +D + + + +
Sbjct: 64 KVQSIGFDRSHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQLEDTGRDLAPLPS 123
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ +I S F + + +A ++N S ++ + + +
Sbjct: 124 STKAIAQIPMRPSLFDQIQERGDVLLRQLELAAKSANALMSPEMREQLRATAESLQHAAD 183
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+T L + E M ++N A L + + + ++
Sbjct: 184 GATTLTKQLGPAVTALPETMHEVNRAMASANT--LLQPNGPLVSNLNKAGTAAEQIGVAL 241
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L L + + D RNP+ +++G
Sbjct: 242 NGLNARVQYDTLPRFNALAGSVGDASRQLKDVAGELGRNPRSLLFG 287
>gi|293602879|ref|ZP_06685318.1| ABC superfamily ATP binding cassette transporter, binding protein
[Achromobacter piechaudii ATCC 43553]
gi|292818673|gb|EFF77715.1| ABC superfamily ATP binding cassette transporter, binding protein
[Achromobacter piechaudii ATCC 43553]
Length = 167
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M + VGLFV+ F + + P + +V GL ++V+
Sbjct: 3 MSREKTDFWVGLFVLLGAVALAFLALRAGNLSTFSFAPTYTLSANF-DNVGGLKPRAAVK 61
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + ++ + T+A+I T GL G Y+ L+
Sbjct: 62 SAGVVVGRVSSITFD-DKTFQAVVSVNLEKAYQFPKDTSASILTSGLLGEQYLGLTAG 118
>gi|119945390|ref|YP_943070.1| hypothetical protein Ping_1679 [Psychromonas ingrahamii 37]
gi|119863994|gb|ABM03471.1| Mammalian cell entry related domain protein [Psychromonas
ingrahamii 37]
Length = 298
Score = 102 bits (253), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/306 (18%), Positives = 113/306 (36%), Gaps = 9/306 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MESK YT VGLFVV ++ +WL+R + + + SV GL+TD++V++
Sbjct: 1 MESKINYTIVGLFVVILMTALLSITFWLTRQHG-QQSYDTYFVHLLESVAGLNTDATVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG +V + L + P I +T + TTA + G+ G+ YIEL + KE
Sbjct: 60 RGVDVGSVVRIGLKVDNPEVVELLIKINQNTAIKTDTTAALNFYGITGLAYIELEGIDKE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + +I + PS + + ++K ++ +I +++ + +
Sbjct: 120 AALLKSV---NGEIPVIPSRPSTLRRIDQSLSKLAEKSIETLENINRLLNDKNINNVELL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + V + + + I+ ++ +
Sbjct: 177 LFESKELLKDLRVQLKGIRTLVDNGVVMENKIAATSEKISAASIS-----VQRMADNLEK 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q S + + + D+ T T Q Q I +D K
Sbjct: 232 NTTGLSQEMSRGMHANFSALNLLLSDLDILTGTLQTTLQDIKDSPADLLFKRTQANPGPG 291
Query: 301 LENIAD 306
+ +
Sbjct: 292 EDGYYE 297
>gi|78064991|ref|YP_367760.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
gi|77965736|gb|ABB07116.1| ABC transporter, inner membrane subunit [Burkholderia sp. 383]
Length = 184
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 1 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVKMKFDNIGGLKPRAAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 61 AGVVVGRVKTIGFDTNTY-QALVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGDT 119
Query: 121 KK 122
+
Sbjct: 120 EM 121
>gi|73542804|ref|YP_297324.1| hypothetical protein Reut_A3120 [Ralstonia eutropha JMP134]
gi|72120217|gb|AAZ62480.1| Mammalian cell entry related [Ralstonia eutropha JMP134]
Length = 173
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV+ F + + + + ++ GL + V+
Sbjct: 1 MKKSALDFWVGLFVVAGFVALLFLALKVGNMSAFTFQETYAVEARFDNIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + ++A I T GL G YI L
Sbjct: 61 AGVVVGRVAAIRFD-DKTYQATVVMNLEKQYQFPKDSSAKILTSGLLGEQYIGLEAG 116
>gi|114330859|ref|YP_747081.1| hypothetical protein Neut_0853 [Nitrosomonas eutropha C91]
gi|114307873|gb|ABI59116.1| Mammalian cell entry related domain protein [Nitrosomonas eutropha
C91]
Length = 159
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV++ + + + + V++ ++ GL + V+
Sbjct: 1 MQRTMMDFWVGLFVMAGIGALLILGLKVGNLTDFQTDKSYVLVGNFENIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + + T A+I T GL G YI L E
Sbjct: 61 AGVVVGRVTDIQFDVQTYDAV-VTMKVDTRYRFPKDTFASILTSGLLGEQYIGLLPGGDE 119
Query: 121 KK 122
+
Sbjct: 120 EM 121
>gi|258593365|emb|CBE69704.1| putative Mce family protein [NC10 bacterium 'Dutch sediment']
Length = 319
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/329 (12%), Positives = 107/329 (32%), Gaps = 15/329 (4%)
Query: 1 MESKNYY--TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M + + VG+FV+ +L + + ++ + +++GL+ + V
Sbjct: 1 MAEREQWMRLRVGIFVLGLLTLFIVFVLTIGSRSRIFERHYTLHA-FFSNIEGLNVGAPV 59
Query: 59 RFNGIPVGRIVGLFLDQE-YPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELS 115
R G VG + + ++ + + + A+I T GL G +EL+
Sbjct: 60 RLAGTSVGSVDDITFSKDLASKKIRVTMSLDARLQDRIREDSIASIETVGLVGDKVLELT 119
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+K T+ AT + A + + +++ + + + +
Sbjct: 120 VGSPDKPTLPPGATIASVDPPDYA---------KLLQKGDQIVNNVVKISDALNQLVGGG 170
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
++ +S I++ + S N ++D +L ++ +
Sbjct: 171 GAEARQDLAKGIASFNRIMSEIEQGTGLLHALVYEKRSGNILKELSDTTVALQQLAHLMK 230
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + L ++ + + T +++ + + + L+ D +
Sbjct: 231 QFQNQKGLAHVLFADPRAESIMADLDQTSKNLKSVSGRLAQGEGTLGALIDDPTLYEDLS 290
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQ 324
S +RS+ + + Q
Sbjct: 291 SLLRGANRSRILRSLIRSTRRSGAPVEPQ 319
>gi|300702839|ref|YP_003744440.1| ABC transporter periplasmic-binding protein [Ralstonia solanacearum
CFBP2957]
gi|299070501|emb|CBJ41796.1| putative ABC-type transporter, periplasmic binding component
[Ralstonia solanacearum CFBP2957]
Length = 171
Score = 102 bits (252), Expect = 1e-19, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VGLFV+ + F + + +V ++ GL + V+
Sbjct: 1 MRKSLLDFWVGLFVLVGIIALLFLALKAGNMSSFSFAKTYQVRAAF-DNIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + T+A I T GL G Y+ L
Sbjct: 60 SAGVVVGRVSQILFD-DKSYQATVVIDMDQRYQFPKDTSAKILTSGLLGEQYVGLEPG 116
>gi|300690219|ref|YP_003751214.1| ABC-type transporter periplasmic binding component [Ralstonia
solanacearum PSI07]
gi|299077279|emb|CBJ49905.1| putative ABC-type transporter, periplasmic binding component
[Ralstonia solanacearum PSI07]
Length = 172
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VGLFV+ + F + + +V ++ GL + V+
Sbjct: 1 MRKSLLDFWVGLFVLVGIIALLFLALKAGNMSSFSFAKTYQVRAAF-DNIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + T+A I T GL G Y+ L
Sbjct: 60 SAGVVVGRVSQILFD-DKSYQATVVLDMDQRYQFPKDTSAKILTSGLLGEQYVGLEPG 116
>gi|291613161|ref|YP_003523318.1| mammalian cell entry related domain protein [Sideroxydans
lithotrophicus ES-1]
gi|291583273|gb|ADE10931.1| Mammalian cell entry related domain protein [Sideroxydans
lithotrophicus ES-1]
Length = 153
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/123 (26%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVR 59
ME VG+FVV+ + + + Y+ ++ +V GL +SVR
Sbjct: 1 MERTTLDLWVGVFVVAGIAALVVLALKVGNLSTYNVSESYQLQAHFT-NVGGLKPTASVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I T A I T GL G YI L
Sbjct: 60 SAGVLVGRVTSIVLDTNSYE-ARVTMSIDKRYQFPKDTFANILTSGLLGEQYIGLVPGGD 118
Query: 120 EKK 122
+K
Sbjct: 119 DKM 121
>gi|91774595|ref|YP_544351.1| hypothetical protein Mfla_0239 [Methylobacillus flagellatus KT]
gi|91708582|gb|ABE48510.1| Mammalian cell entry related protein [Methylobacillus flagellatus
KT]
Length = 164
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/122 (23%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME VG+FV + + F + N + ++ L + V+
Sbjct: 1 MERTTIDLWVGVFVAAGIAALFGLALKVGNFNSATLGETYSVTGAFENIGSLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D E +L + P T A I T GL G YI L +
Sbjct: 61 AGVVVGRVDAIRFDPETYE-ALVTVKVDKRYPFPKDTFANIYTAGLLGEQYIGLEAGGDD 119
Query: 121 KK 122
K
Sbjct: 120 KM 121
>gi|300313363|ref|YP_003777455.1| organic solvents resistance ABC transporter periplasmic protein
[Herbaspirillum seropedicae SmR1]
gi|300076148|gb|ADJ65547.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component protein [Herbaspirillum
seropedicae SmR1]
Length = 158
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 56/154 (36%), Gaps = 4/154 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ K+ VG+FV+ + F + + + ++ GL + ++V
Sbjct: 1 MQRKSLDAWVGIFVLLGVAALVFLALKAGNMSSMSFGQKTYTIKASF-DNIGGLKSRAAV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGR+ + D + ++ + ++A I T GL G YI +
Sbjct: 60 KSAGVVVGRVDSIRFD-DQTFRAVVSLNMDESYKFPKDSSAKILTSGLLGEQYIGIEPGG 118
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ Q A++ G + AE
Sbjct: 119 DTANLASGDTIKMTQSAIVLENLIGQFLYSKAAE 152
>gi|172059408|ref|YP_001807060.1| hypothetical protein BamMC406_0343 [Burkholderia ambifaria MC40-6]
gi|171991925|gb|ACB62844.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MC40-6]
Length = 187
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 1 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 60 SAGVVVGRVKAIGFDTNTY-QALVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGD 118
Query: 120 EKK 122
+
Sbjct: 119 TEM 121
>gi|325998311|gb|ADZ50519.1| putative ABC transporter periplasmic substrate-binding protein
[Helicobacter pylori 2017]
Length = 271
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 45/111 (40%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L I WL DG E ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLVCMVGFILWLGPLGFDDGEDYEYVVYTDKDLGGIATNSPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI VG ++ + ++ +I+ + + + ++G G+ +
Sbjct: 61 KGIQVGNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKF 111
>gi|317485265|ref|ZP_07944146.1| hypothetical protein HMPREF0179_01499 [Bilophila wadsworthia 3_1_6]
gi|316923556|gb|EFV44761.1| hypothetical protein HMPREF0179_01499 [Bilophila wadsworthia 3_1_6]
Length = 147
Score = 102 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 3/129 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ +VG FV+ L + L R + + SV GL + V G+
Sbjct: 4 SKEAAVGFFVMLGLVCVAYLTVKLGRMEVFHSEGYVLTASF-NSVSGLRPGAEVEIAGVR 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VGR+ + LD + P + + + L A+++T GL G YI L + +
Sbjct: 63 VGRVKSIRLDDKQPRAV-VELQLGDNVHLTDDVIASVKTSGLIGDKYISLEPGGS-GEPL 120
Query: 125 FQIATERNQ 133
+
Sbjct: 121 KNGDEITDT 129
>gi|167585310|ref|ZP_02377698.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
ubonensis Bu]
Length = 308
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGAVFWFNVDRAV---RIPYDLIARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ P + L+ D P+ ST ++ QG+ GI +++L +
Sbjct: 58 RGLDVGKVQSIGFDRSRPGQIRIRILVDKDAPITQSTFGSLGFQGVTGIAFVQLDDTGTD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + A I PS + + +++ +++ +++ +
Sbjct: 118 LSPL---PSSVKAVAQIPMHPSLFDQIQQRGDVLLRQLELAAKSANELMSPEMREQ 170
Score = 37.2 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 53/178 (29%), Gaps = 20/178 (11%)
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++D +D S S + A + ++ + + K + + + +
Sbjct: 110 QLDDTGTDLSPLPSSVKAVAQIPMHPSLFDQIQQRGDVLLRQLELAAKSANELMSP-EMR 168
Query: 340 SNLNDSSQKFAELMSKINNIS-----ALKENNSLFKDAQRAMHTFRDTSE-------KIN 387
L +++ +S A+ + RAM + + +N
Sbjct: 169 EQLRATAESLQHAADGAATLSKQLGPAVAALPGTMHEVNRAMASANSLLQPNGPLIANLN 228
Query: 388 RY---IPSIGNNLQNFSQS----GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ IG+ L + L L + + D RNP+ +++
Sbjct: 229 KAGTAAEHIGDALNELNARVQYDTLPRFNALAASVGDASRQLKDVAGELGRNPRSLLF 286
>gi|238918532|ref|YP_002932046.1| hypothetical protein NT01EI_0582 [Edwardsiella ictaluri 93-146]
gi|238868100|gb|ACR67811.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 177
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLF++ L + F ++ + +V GL S V+
Sbjct: 1 MQTKKAEVWVGLFMLIALCAAIFLCLQVANVKSLGSAPTYRLYATFDNVGGLKARSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVAEISLDPQTY-LPRVAMDIDRRYNHIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRA 135
+ + I +
Sbjct: 120 DPEMGTAILKDGGTIQ 135
>gi|108801579|ref|YP_641776.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119870733|ref|YP_940685.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771998|gb|ABG10720.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119696822|gb|ABL93895.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 344
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/308 (12%), Positives = 96/308 (31%), Gaps = 6/308 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +VG+F V++L + + G L VR
Sbjct: 1 MKREGNLLNVGIFTVAMLLVAAMLVVVFGEFRFASGNSYH--ANFTE-ASRLKAGQDVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + L+ + + LY ST A +R + L G Y+E+ + E
Sbjct: 58 AGVPVGTVTDIKLNDDNT--VDVAFDVHNKYQLYTSTRAVVRYENLVGDRYLEIISGPGE 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +T Q + + + +IE ++
Sbjct: 116 LRKLPPGSTIPKQNTQPALDLDALLGGLRPVLKGLDGAKVNEL-SSAVIELLQGQGGALA 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T + N + + + + D + + Q +
Sbjct: 175 NLLATTGSFSQNLAARDQLIGDVITNLNTVLGTVDEKGAQFDASVDRLQQLITGLAQGRD 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I I+ + ++ + + ++ + + + Q++D +D + ++ +
Sbjct: 235 PIAGAIEPLAAAENDLTEMLKASRRPLQGVIENARPLAQRLDERKADVNKVIEPLAENYL 294
Query: 301 LENIADST 308
N +
Sbjct: 295 RLNALGAY 302
>gi|95928282|ref|ZP_01311030.1| Mammalian cell entry related [Desulfuromonas acetoxidans DSM 684]
gi|95135553|gb|EAT17204.1| Mammalian cell entry related [Desulfuromonas acetoxidans DSM 684]
Length = 148
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ N VGLF++ + L + +D V R GSV GL +SV+
Sbjct: 1 MKRFNLEIVVGLFMLLGFASVVYLSVKLGDVSLFDNDHYRVKARF-GSVSGLKLGASVQI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ + LD + + I+ L A++RT G+ G YI +
Sbjct: 60 GGVDIGKVATISLDPKSYDAV-VALDIKNGIELQDDCIASVRTSGIIGDRYISILPGGSP 118
Query: 121 K 121
Sbjct: 119 M 119
>gi|34558308|ref|NP_908123.1| ABC transporter permease [Wolinella succinogenes DSM 1740]
gi|34484027|emb|CAE11023.1| conserved hypothetical protein-Permease component of an
ABC-transporter [Wolinella succinogenes]
Length = 298
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 54/117 (46%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ YT VG F ++ + ++W+ R + + G+ + VRF
Sbjct: 1 MENRLSYTLVGGFFIACMVAMALFVWWIGRYGEDREAYRPYYLLTKELQSGIKKQTPVRF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
GIPVG + G +E+ + + + P+ + A I +QGL+GI+YI +
Sbjct: 61 QGIPVGFVRGFDFSKEHSGWIEIELWVEQEIPIKRDSLAVIESQGLSGISYIAIKQG 117
>gi|149925792|ref|ZP_01914056.1| Mammalian cell entry related protein [Limnobacter sp. MED105]
gi|149825909|gb|EDM85117.1| Mammalian cell entry related protein [Limnobacter sp. MED105]
Length = 157
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 1/116 (0%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ VGLFV+ F + + + ++ GL + V+
Sbjct: 3 KNTAVDFWVGLFVLIGALALVFLALKAGNLSSFTTGDQYRVTAEFDNIGGLKPRAPVKSA 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + ++A I T GL G Y+ +
Sbjct: 63 GVTVGRVANINLDPVTFRAV-VALDLEEGFEFPKDSSARILTSGLLGEQYVGIEAG 117
>gi|187927278|ref|YP_001897765.1| Mammalian cell entry related domain-containing protein [Ralstonia
pickettii 12J]
gi|309780022|ref|ZP_07674775.1| signal peptide protein [Ralstonia sp. 5_7_47FAA]
gi|187724168|gb|ACD25333.1| Mammalian cell entry related domain protein [Ralstonia pickettii
12J]
gi|308921192|gb|EFP66836.1| signal peptide protein [Ralstonia sp. 5_7_47FAA]
Length = 322
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/325 (14%), Positives = 115/325 (35%), Gaps = 6/325 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + GLF + ++ F ++ W +R P + +V+GL+ +SV++
Sbjct: 1 MENKAHAFLAGLFTIGLIIFIGLAVMWFNRDQTVRLP---YDVVTRSTVNGLNPQASVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + P + + L+ D P+ +T + QG+ G+ Y++L +
Sbjct: 58 RGLDVGKVDSIRFDDKVPGQIVVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGFD 117
Query: 121 KKTIFQIAT---ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
++ +G + + D + + I+ + E
Sbjct: 118 NSKRAPSPVRLATSDKDPARIRMEAGFLDELDKRGDQMLSKLDQTLNSLSIMFDDEHRQQ 177
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T + T+ A + ++ + + +T L SL +
Sbjct: 178 VTASLQSFQKTMDAYSTLAQQAEPTMRRLPQIADNLDSTLVATRKLTQSLSDPKGPLMST 237
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + ++ T+ + + ++ + DH ++DF+++ +S
Sbjct: 238 LSGAGTDLTAATQSMQSAANVLTYETLPQLNGFAREARQAVRGFDHAVTDFNARPQSVLF 297
Query: 298 SAFLENIADSTSNMRSSISAIREIT 322
+ + +
Sbjct: 298 GPAPGAPDPGETGFTAPAARASAQP 322
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 61/172 (35%), Gaps = 12/172 (6%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
R E+ ++ D +LS + S E+ T++++S + + Q+
Sbjct: 139 RMEAGFLDELDKRGDQMLSKLDQTLNSLSIMFDDEHRQQVTASLQSFQKTMDAYSTLAQQ 198
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
T+ + I NL+ + +L +++ M T +
Sbjct: 199 AEPTMRRLPQIADNLDSTLVATRKLTQSLSDPKG------------PLMSTLSGAGTDLT 246
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
S+ + + L + R+ ++ V FD + +F PQ +++G
Sbjct: 247 AATQSMQSAANVLTYETLPQLNGFAREARQAVRGFDHAVTDFNARPQSVLFG 298
>gi|220933919|ref|YP_002512818.1| Mammalian cell entry related domain protein [Thioalkalivibrio sp.
HL-EbGR7]
gi|219995229|gb|ACL71831.1| Mammalian cell entry related domain protein [Thioalkalivibrio sp.
HL-EbGR7]
Length = 152
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 52/130 (40%), Gaps = 2/130 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ +VG+FV + F +S ++Y + ++ GL + V
Sbjct: 1 MTTRTIEITVGIFVALGVAALFMLAMQVSNISEYRNSDGYTVSAYFTNIGGLKVRAPVTV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ VGR+ + D E + + I D L T A+I T GL G YI L +
Sbjct: 61 SGVRVGRVTAIRYDPERY-QARVEITIGADHDYLPTDTQASIYTAGLLGEQYIALEPGGE 119
Query: 120 EKKTIFQIAT 129
++
Sbjct: 120 DEVLAQGGEI 129
>gi|187479776|ref|YP_787801.1| virulence protein transporter [Bordetella avium 197N]
gi|115424363|emb|CAJ50916.1| putative virulence protein transporter [Bordetella avium 197N]
Length = 162
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M + VGLFV+ F + + P E+ ++ GL + V+
Sbjct: 1 MSREKTDFWVGLFVLLGALSLIFLALRAGNLSSFSFTPTYELTADF-DNIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + + + ++ + ++A+I T GL G YI ++ +
Sbjct: 60 SAGVVVGRVSNISFN-DQTFQAVVTMKLETPFKFPSDSSASILTSGLLGEQYIGVTPGSE 118
Query: 120 EKKTIFQI 127
++
Sbjct: 119 DENFADGG 126
>gi|109948192|ref|YP_665420.1| ABC transport system substrate-binding protein [Helicobacter
acinonychis str. Sheeba]
gi|109715413|emb|CAK00421.1| ABC transport system substrate-binding protein [Helicobacter
acinonychis str. Sheeba]
Length = 271
Score = 101 bits (251), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 50/123 (40%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G L F I WL DG ++ + G++T+S + +
Sbjct: 1 MERHVNYTLIGGLFFLCLIFMVGFILWLGHVGLDDGKYHRYVVYTDKDLGGIATNSPISY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG +V + ++ +I+ + + + +QGL G+ Y+ L E
Sbjct: 61 KGIQVGNVVKVGFAKDKVGVVRLDLMIKNSVKIRKDSKVVVSSQGLMGLKYLSLEQSHNE 120
Query: 121 KKT 123
+
Sbjct: 121 EFY 123
>gi|264676424|ref|YP_003276330.1| periplasmic protein [Comamonas testosteroni CNB-2]
gi|262206936|gb|ACY31034.1| putative periplasmic protein [Comamonas testosteroni CNB-2]
Length = 315
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FV+ + WL+R N+ + V GL ++VR+
Sbjct: 1 MENKSHAMAAGIFVLVVATLLAGLAVWLTRDNR---EYQLYEMSTKDGVSGLQPQATVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++V + D + + L + + DTP+ P+T A + QG+ G+ +I+L K
Sbjct: 58 KGVPVGKVVRIGFDPQISGNVLIRIAVGEDTPVTPATYAQLGYQGVTGLAHIQLDDDSKS 117
Query: 121 KKTIFQIA 128
+ +
Sbjct: 118 SQPLKPGP 125
Score = 44.5 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 20/170 (11%), Positives = 52/170 (30%), Gaps = 12/170 (7%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + LL + + +N + + + +A I D + + T
Sbjct: 137 PLNMLADQGPVLLERVDEISRRLNSMLGEDNQKRVSVALDNIAAASGGIKDLAETMNKTA 196
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT---SEKINRY 389
IT++ + + Q + + + D Q+ + ++I
Sbjct: 197 KDFPQITADAHQTLQSLTKAGNA---------ATGVATDLQQTVRKVNAPDGPLQQIAEG 247
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ ++ +S L + + F NPQ +++G
Sbjct: 248 TQALSQAAESLGRSTLPRMNGAADDVSRAARSMGAAAGRFNDNPQSVIYG 297
>gi|206603560|gb|EDZ40040.1| Putative ABC transporter [Leptospirillum sp. Group II '5-way CG']
Length = 518
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/392 (12%), Positives = 115/392 (29%), Gaps = 58/392 (14%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+G F+V + + + + SVDGL ++VR G+ VG
Sbjct: 6 EAKLGFFIVVAILVAVGLTLRFGHFHLTPKGSYRIYADF-RSVDGLEKGTAVRIAGVRVG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L + + +I L I + G G YIEL + K I +
Sbjct: 65 EVTDITL--RSSGMAHVEMMIFDGLKLPADIHPVIFSNGFLGKLYIELVPGKSAKPIIRK 122
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
R + S +++
Sbjct: 123 NQFFPTHRNGQEQSGSYLSFSWFL------------------------------------ 146
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + P + + T + + + L
Sbjct: 147 ------PFPAWGDPLPSQPGAPVPGPALPSSKTEDPGYVQPGQTLASPGETVSVNRLVRK 200
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ +K+ + ++ T+ ++ + L + F +N+ D
Sbjct: 201 LNRIADDIKAITGALRRAMGNQKGTEDLKKTLDNLKVLTDNLRE---------FTKNLKD 251
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN----ISAL 362
+ + + +I DQ + + +++ ++ ++ +++KI++ I L
Sbjct: 252 KSPAILKKVDSIATKIDQGVGTVGQLVNNKDLYKKVDSAAGHLDSILAKIDSGQGTIGQL 311
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
N L+ + + F D S K ++ + +
Sbjct: 312 VNNPDLYNNLNATLKKFSDLSHKSDQMVLDVS 343
>gi|238028750|ref|YP_002912981.1| Mce-like protein [Burkholderia glumae BGR1]
gi|237877944|gb|ACR30277.1| Mce related protein [Burkholderia glumae BGR1]
Length = 316
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + +L ++W + P + +V GL D+ VR+
Sbjct: 1 MENKSHAFWAGLFAIGLLLAIVAVVFWFNVDRTVRIP---YDLVARTNVTGLYPDADVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D +P + L+ D P+ ST T+ QG+ GI +++L +
Sbjct: 58 RGLDVGKVASIHFDHAHPGEISIRILVDHDAPITRSTFGTLGFQGVTGIAFVQLDDTGHD 117
Query: 121 KKTIFQIA 128
+ +
Sbjct: 118 LAPLPSSS 125
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 62/180 (34%), Gaps = 4/180 (2%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
+ D L +K E +A N S + + +
Sbjct: 122 PSSSKAVAQIPLHPSLFDQLQQRGDVLLKQFEVAASSVNALLSPEMREQLRATVASMQQA 181
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL-FKDAQRAMHTFRDTS 383
+ + ++E +T+ L +++++ ++ + + A ++ A +A
Sbjct: 182 ADGVTTLTRSLEPVTAQLPETTRRLNRALASADALIAPNGPVAVNLDRAGKAAEQAGTAL 241
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+++ + + +++ L + +L L +T + RNP+ +++G G
Sbjct: 242 ASMDQTLSELNASVR---YETLPRVNSLSSNLGDTSRTVREVAGEIGRNPRSLLFGTSAG 298
>gi|269137864|ref|YP_003294564.1| hypothetical protein ETAE_0506 [Edwardsiella tarda EIB202]
gi|267983524|gb|ACY83353.1| conserved hypothetical protein [Edwardsiella tarda EIB202]
gi|304557917|gb|ADM40581.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Edwardsiella tarda FL6-60]
Length = 177
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLF++ L + F ++ + +V GL S V+
Sbjct: 1 MQTKKAEVWVGLFMLIALCAAVFLCLQVANVKSLGSEPTYRLYATFDNVGGLKARSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVAEISLDPQTY-LPRVAMDIDQRYNHIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRA 135
+ + I +
Sbjct: 120 DPEMGTAILKDGGTIQ 135
>gi|113866163|ref|YP_724652.1| ABC-type transporter, periplasmic component [Ralstonia eutropha
H16]
gi|113524939|emb|CAJ91284.1| ABC-type transporter, periplasmic component [Ralstonia eutropha
H16]
Length = 313
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/296 (13%), Positives = 102/296 (34%), Gaps = 11/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ G+F + + F+I+W S + + +V+GL V++
Sbjct: 2 MENKSHAFLAGVFTIGLAVLVLFAIFWFSTDHAV---RVPYDLITRSTVNGLQPQGDVKY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + P + + + DTP+ +T T+ QG+ GI Y++L
Sbjct: 59 RGLAVGKVESIKFDPQVPGQIIVRVNVNKDTPITRTTYGTLGFQGVTGIAYVQLDDSATH 118
Query: 121 KKTIFQIATERNQR------AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
T + + S ++ + Q
Sbjct: 119 DGTTASPPLPTSPKAVARIAMRPGFFEELEKRGDSLLTQVETMMASLNDMFQGANRAELM 178
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS--SDSKNTFNTITDLITSLDKMIK 232
++ + L++++ + ++ ++ + + ++ + +
Sbjct: 179 AAIRSVRKTAEDYSRLSDSLGPAANRLPKVTENLNATLESTRRLTQELANPNGTVMRTVD 238
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ Q+ D R+T +TF+ + + S
Sbjct: 239 SVGRDLQGAASSVQSAAGTFSEETLPQLNGLARDARQTARTFERAAGQFNESPSSV 294
>gi|329913018|ref|ZP_08275866.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Oxalobacteraceae bacterium IMCC9480]
gi|327545455|gb|EGF30662.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Oxalobacteraceae bacterium IMCC9480]
Length = 157
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ K+ VGLFV+ FF + V +R ++ GL + V+
Sbjct: 1 MQRKSLDLWVGLFVLLGAAALFFLAMKAGNLSSLSFAQTYPVTMRF-DNIGGLKPRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + + + + + ++A I T GL G YI L
Sbjct: 60 SAGVVVGRVADIAFN-DQRFQASVTVNMETRYKFPKDSSAKILTSGLLGEQYIGLEPG 116
>gi|134297085|ref|YP_001120820.1| hypothetical protein Bcep1808_2994 [Burkholderia vietnamiensis G4]
gi|134140242|gb|ABO55985.1| Mammalian cell entry related domain protein [Burkholderia
vietnamiensis G4]
Length = 309
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQSIGFDRTHPGQIRIRILVDHDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + A I PS + + +++ +++ +++ +
Sbjct: 115 GRDLAPLPSSSKSIAQIPMRPSLFDQIQERGDVLLRQLEQAAKSANELMSPEMRAQ 170
Score = 40.7 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 44/176 (25%), Gaps = 11/176 (6%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
++ D + ++ E +A N S ++ +
Sbjct: 122 PSSSKSIAQIPMRPSLFDQIQERGDVLLRQLEQAAKSANELMSPEMRAQLLATAASLQHA 181
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTS 383
+ +E + L D+ + M+ N + + A A
Sbjct: 182 ADGAAALSKQLEPAVAALPDTMHQVDRAMASANTLLQPNGPLVANLNKAGSAAEQVGVAL 241
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+N + L L + + D RNP +++G
Sbjct: 242 NDLNARVQ----------YDTLPRFNALAGSVGDASRQLKDVAGELGRNPSSLLFG 287
>gi|167587706|ref|ZP_02380094.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia ubonensis Bu]
Length = 175
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVVGFLAVLFLALKVGNMSSLSLQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D +L + ++A I T GL G Y+ L
Sbjct: 63 AGVVVGRVQAIGFDTNTY-QALVTIDLDKQYQFPKDSSAKILTSGLLGEQYVGLEPG 118
>gi|261344895|ref|ZP_05972539.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Providencia rustigianii DSM 4541]
gi|282567035|gb|EFB72570.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Providencia rustigianii DSM 4541]
Length = 170
Score = 101 bits (250), Expect = 2e-19, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG F++ + F ++ + +V GL S V+
Sbjct: 1 MQSKKSEIWVGCFMLLAIAAIVFLCLKVADLKSIGSQSTYQVSAPFENVGGLKVGSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ L D + S++ +IRT GL G YI ++
Sbjct: 61 GGVVIGRVASISLDKKNYVPEVKIDLLSEYD-NIPDSSSLSIRTSGLLGEQYIAMNIGPD 119
Query: 120 EKKTIFQIATERNQ 133
++ I + +
Sbjct: 120 DEDMGIAILKDGGR 133
>gi|299065475|emb|CBJ36644.1| putative ABC-type transporter, periplasmic binding component
[Ralstonia solanacearum CMR15]
Length = 173
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VGLFV+ L F + + +V ++ GL + V+
Sbjct: 1 MRKSLLDFWVGLFVLVGLIALLFLALKAGNMSAFSFAKTYQVRAAF-DNIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + ++A I T GL G Y+ L
Sbjct: 60 SAGVVVGRVSQILFD-DKSYQATVVLDMDQRYQFPKDSSAKILTSGLLGEQYVGLEPG 116
>gi|289549156|ref|YP_003474144.1| hypothetical protein Thal_1386 [Thermocrinis albus DSM 14484]
gi|289182773|gb|ADC90017.1| Mammalian cell entry related domain protein [Thermocrinis albus DSM
14484]
Length = 515
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/294 (13%), Positives = 86/294 (29%), Gaps = 5/294 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VGL VV + F I + + V GLS S VR GI
Sbjct: 4 SNEAKVGLLVVIVAMSLAFVILIFGEIPFFKPATKTYRVYF-DDVAGLSKGSEVRVAGIK 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
G + + L + D LY + TA I T GL G Y+ + E +
Sbjct: 63 SGTVKSVRL---KDGKVEVVLEVYRDVTLYRNATAYIGTLGLMGDKYLSVDPGTPEAGVL 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ R + + + + + + +
Sbjct: 120 EEGGVIRYTQGYADTDRLIREMTAAAEAMKLMAQNFQTILAENREDIRALVQNMEMLTRH 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
V+ N + + + H + + + + + + + + + +
Sbjct: 180 LDQMVVENRENVRASLTGIRLLVEHLNRTLPQTLASVQRLADTLEAMASENREDIKVAVR 239
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQT-FQEVGQKIDHLLSDFSSKMKSKET 297
N++ S + S ++ ++ + T E Q + + + + K
Sbjct: 240 NLRELSEDLRSSLPTLVAQLNQLSANLNTVVTENRQDLRTISENLAESSKKLNL 293
>gi|17547679|ref|NP_521081.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|17429983|emb|CAD16667.1| probable signal peptide protein [Ralstonia solanacearum GMI1000]
Length = 173
Score = 101 bits (250), Expect = 3e-19, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VGLFV+ L F + + +V ++ GL + V+
Sbjct: 1 MRKSLLDFWVGLFVLVGLIALLFLALKAGNMSAFSFAKTYQVRAAF-DNIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + ++A I T GL G Y+ L
Sbjct: 60 SAGVVVGRVSQILFD-DKSYQATVVLDMDQRYQFPKDSSAKILTSGLLGEQYVGLEPG 116
>gi|299533749|ref|ZP_07047121.1| putative periplasmic protein [Comamonas testosteroni S44]
gi|298718298|gb|EFI59283.1| putative periplasmic protein [Comamonas testosteroni S44]
Length = 315
Score = 101 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FV+ + WL+R N+ + V GL ++VR+
Sbjct: 1 MENKSHAMAAGIFVLVVATLLAGLAVWLTRDNR---EYQLYEMSTKDGVSGLQPQATVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++V + D + + L + + DTP+ P+T A + QG+ G+ +I+L K
Sbjct: 58 KGVPVGKVVRIGFDPQISGNVLIRIAVGEDTPVTPATYAQLGYQGVTGLAHIQLDDDSKS 117
Query: 121 KKTIFQIA 128
+ +
Sbjct: 118 SQPLKPGP 125
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 20/170 (11%), Positives = 52/170 (30%), Gaps = 12/170 (7%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + LL + + +N + + + +A I D + + T
Sbjct: 137 PLNMLADQGPVLLERVDEISRRLNSMLGEDNQKRVSVALDNIAAASGGIKDLAETMNKTA 196
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT---SEKINRY 389
IT++ + + Q + + + D Q+ + ++I
Sbjct: 197 KDFPQITADAHQTLQSLTKAGNA---------ATGVATDLQQTVRKVNAPDGPLQQIAEG 247
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ ++ +S L + + F NPQ +++G
Sbjct: 248 TQALSQAAESLGRSTLPRMNGAADDVSRAARSMGAAAGRFNDNPQSVIYG 297
>gi|225851011|ref|YP_002731245.1| mce related protein [Persephonella marina EX-H1]
gi|225646722|gb|ACO04908.1| mce related protein [Persephonella marina EX-H1]
Length = 514
Score = 101 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/362 (13%), Positives = 111/362 (30%), Gaps = 14/362 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VGLFV+ I + + + I V+GLS + V+
Sbjct: 1 MNTQ---LKVGLFVLIISGIFAYLTIAF-NDRGFGQDTQDYYIYFNM-VEGLSKGADVQV 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + + K IR D PLY + A IRT GL G Y+ + +
Sbjct: 56 KGVKVGRVEDIVF---KNSIVEVKVSIRKDVPLYKNAVAYIRTLGLMGDKYVYIDPGTPD 112
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISN------AENTSKKISDSSRHIQKIIENIEK 174
+ + A R + +A + + +N +K I + + +
Sbjct: 113 AGKLPEKAIIRKGQVFTSAEEAFSSAADVAKKVEILVDNLNKAIEEGNLTELIRRIRVLA 172
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
T + + T + + + + I+ +
Sbjct: 173 EHTDQLVQENRRDLRRTIENVRVITDNLRTHLPELIAKLDRITTHLEAITGDNRDDIREL 232
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + + + V E + + +KI +
Sbjct: 233 VKNLKETSVALKEKTPKVLEDIDQAALQVRDTVGENREDIRSAVEKIKDASLKLDRILAK 292
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ + ++ ++++ + + K+I+ + + + ++ ++
Sbjct: 293 IDEGKGTIGKLVNEDDLYNNVNEGVKSFAKPFKVINRSKLDIKLYAETHTGNEDVKAGIA 352
Query: 355 KI 356
I
Sbjct: 353 AI 354
>gi|166366297|ref|YP_001658570.1| hypothetical protein MAE_35560 [Microcystis aeruginosa NIES-843]
gi|166088670|dbj|BAG03378.1| hypothetical protein MAE_35560 [Microcystis aeruginosa NIES-843]
Length = 463
Score = 101 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 53/431 (12%), Positives = 134/431 (31%), Gaps = 24/431 (5%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+GL +++ + I WLS + + G P +V G+ + V + G+ +G++
Sbjct: 19 IGLMLLTSGGILIWFIAWLSNFS-FGGRSYRASFLFP-NVGGMMVGTRVGYRGVRIGQVT 76
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + E + I P D + ++ GL G T I+++ A
Sbjct: 77 AITPEPEG---VAVEVEISPADRLIPSNSLIEAIQSGLVGETTIDITP---------LQA 124
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+P+ I + + S + + L + + +
Sbjct: 125 LPVGGVKEPPLSPNCNGEVIICNGSRLQGQSALNVNTLIRSLLRISNLVSDPDMVAGFRS 184
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ + + + + T+ + + + + + L +
Sbjct: 185 FTQRAANALGGLDRFSGEATTALSEVRRSGTLGKVNSGMRSLESLPQVSGSLDRLSSDLS 244
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + ++ ++ + + LL + + + A +N +T
Sbjct: 245 GVGGLSQEATTLLRSLQGSGGLRNLDATLVEARKTLLLVGETTEELRVFLAANQNRLIAT 304
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + S + T I T I NLN S +L + N +A + +
Sbjct: 305 LDSIKTTSDRLQTTLAALDPILTQVQKSQIIENLNTISANAVKLSENLGNFTAYLSDPAT 364
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + + R + + + N L +++ + +++
Sbjct: 365 VVTLQQLLDSSRAAFANLQKITSDVDEITGN---------PQLRQEIIRLIQGLSRLVSS 415
Query: 429 FERNPQDIVWG 439
E+ Q+ G
Sbjct: 416 SEQLQQEFAQG 426
>gi|83748207|ref|ZP_00945234.1| toluene tolerance protein TTG2C [Ralstonia solanacearum UW551]
gi|207744517|ref|YP_002260909.1| hypothetical protein RSIPO_02727 [Ralstonia solanacearum IPO1609]
gi|83725175|gb|EAP72326.1| toluene tolerance protein TTG2C [Ralstonia solanacearum UW551]
gi|206595923|emb|CAQ62850.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 172
Score = 101 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VGLFV+ + F + + +V ++ GL + V+
Sbjct: 1 MRKSLLDFWVGLFVLVGIIALLFLALKAGNMSSFSFAKTYQVRAAF-DNIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + ++A I T GL G Y+ L
Sbjct: 60 SAGVVVGRVSQILFD-DKSYQATVVLDMDQRYQFPKDSSAKILTSGLLGEQYVGLEPG 116
>gi|134294507|ref|YP_001118242.1| hypothetical protein Bcep1808_0395 [Burkholderia vietnamiensis G4]
gi|134137664|gb|ABO53407.1| Mammalian cell entry related domain protein [Burkholderia
vietnamiensis G4]
Length = 188
Score = 101 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV+ F + + P V ++ ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVAGFLAVLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 61
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D ++ + ++A I T GL G YI L
Sbjct: 62 SAGVVVGRVKSVGFDTNTY-QAVVTIDVDGQYQFPKDSSAKILTSGLLGEQYIGLDPGGD 120
Query: 120 EKK 122
+
Sbjct: 121 TEM 123
>gi|124516680|gb|EAY58188.1| putative ABC transporter [Leptospirillum rubarum]
Length = 518
Score = 101 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/392 (12%), Positives = 116/392 (29%), Gaps = 58/392 (14%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+G F+V + + + + SVDGL ++VR G+ VG
Sbjct: 6 EAKLGFFIVVAILVAVGLTLRFGHFHLTPKGSYRIYADF-RSVDGLEKGTAVRIAGVRVG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L + + +I L I + G G YIEL + K I +
Sbjct: 65 EVTDITL--RSSGMAHVEMMIFDGLKLPADIHPVIFSNGFLGKLYIELVPGKSAKPIIKK 122
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+R + S +++
Sbjct: 123 NQFFPTRRERQEQSGSHLSFSWFL------------------------------------ 146
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + S + T + + + L
Sbjct: 147 ------PSPVWGDPLPSQPGASVPGPSLPSSKTEDPGYVQPGQTLASPGETVSVNRLVRK 200
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ +K+ + ++ T+ ++ + L + F +N+ D
Sbjct: 201 LNRIADDIKAITGALRRAMGNKKGTEDLKKTLDNLKVLTDNLRD---------FTKNLKD 251
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN----ISAL 362
+ + + +I DQ + + +++ + ++ ++ +++KI++ I L
Sbjct: 252 KSPAILKKVDSIATKIDQGVGTVGQLVNNKDLYNKVDSAAGHLDSILAKIDSGQGTIGQL 311
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
N L+ + + F D S K ++ + +
Sbjct: 312 VNNPDLYNNLNATLKKFSDLSHKSDQMVLDVS 343
>gi|293394225|ref|ZP_06638525.1| toluene tolerance ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
gi|291423203|gb|EFE96432.1| toluene tolerance ABC superfamily ATP binding cassette transporter,
binding protein [Serratia odorifera DSM 4582]
Length = 183
Score = 101 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L F ++ I ++ GL S V+
Sbjct: 1 MQTKKSEIWVGAFMLIALCAIIFICLQVANVKSIGNEPTYRIYATFDNIGGLKPRSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADIALDPKTYTP-RVALDIQDKYDQIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ I + + +
Sbjct: 120 DPDMGTSILKDGGTIQDTKSAMVLED 145
>gi|299068159|emb|CBJ39378.1| putative ABC-type transporter, periplasmic component (resistance to
organic solvents) [Ralstonia solanacearum CMR15]
Length = 330
Score = 101 bits (249), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/308 (12%), Positives = 108/308 (35%), Gaps = 16/308 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + GLF + ++ F ++ W +R P + +V+GLS ++V++
Sbjct: 1 MENRAHAFLAGLFTIGLVIFIALAVVWFNRDQTVRLP---YEVVTRSTVNGLSPQAAVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + P + + L+ D P+ +T + QG+ G+ Y++
Sbjct: 58 RGLDVGKVDSIRFDDKVPGQIIVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQ------- 110
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ E +R + N + + + + + +++ I++ L++
Sbjct: 111 ---LDDRGYEGGRREVNRTRLETSNQHPARIAMEAGFLDELDKRGDQMLARIDQTLSSLS 167
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A + ++ + T + I + +
Sbjct: 168 ALFDDEHRQ--ALMAAMQSFRGTMDSYNALARQAEPTMRRLPQIADNLDATLSATRRLSQ 225
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTF-QEVGQKIDHLLSDFSSKMKSKETSA 299
+ + + + + + ++ T E +++ + ++S + +
Sbjct: 226 SLSDPKGPLMGTLASAGNDLSSASQSMQAATSVLANETLPQLNGFTREARQAVRSFDHAV 285
Query: 300 FLENIADS 307
N
Sbjct: 286 ADFNTRPQ 293
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 58/184 (31%), Gaps = 12/184 (6%)
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
+ E+ ++ D +L+ + S E+ + M+S +
Sbjct: 132 NQHPARIAMEAGFLDELDKRGDQMLARIDQTLSSLSALFDDEHRQALMAAMQSFRGTMDS 191
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFR 380
++ T+ + I NL+ + L +++ M T
Sbjct: 192 YNALARQAEPTMRRLPQIADNLDATLSATRRLSQSLSDPKG------------PLMGTLA 239
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++ S+ + L + R+ ++ V FD + +F PQ +++G
Sbjct: 240 SAGNDLSSASQSMQAATSVLANETLPQLNGFTREARQAVRSFDHAVADFNTRPQSVLFGP 299
Query: 441 EKGS 444
+
Sbjct: 300 APAT 303
>gi|207721839|ref|YP_002252277.1| hypothetical protein RSMK02119 [Ralstonia solanacearum MolK2]
gi|206587006|emb|CAQ17590.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 172
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 42/118 (35%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VGLFV+ + F + + +V ++ GL + V+
Sbjct: 1 MRKSLLDFWVGLFVLVGIIALLFLALKAGNMSSFSFAKTYQVRAAF-DNIGGLKVRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + ++A I T GL G Y+ L
Sbjct: 60 SAGVVVGRVSQILFD-DKSYQATVVLDMDQRYQFPKDSSAKILTSGLLGEQYVGLEPG 116
>gi|188532481|ref|YP_001906278.1| hypothetical protein ETA_03240 [Erwinia tasmaniensis Et1/99]
gi|188027523|emb|CAO95370.1| Putative membrane protein [Erwinia tasmaniensis Et1/99]
Length = 186
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L F ++ + +V GL S V+
Sbjct: 1 MQTKKSEIWVGAFLLLALCAIIFLCLRVTDLKSLGSVTTWKLYATFDNVGGLKPGSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + + I + +++ +RT GL G Y+ L+
Sbjct: 61 GGVVIGRVSDITLDAKNYSP-KVSMDIDDRYNNIPDTSSLAVRTSGLLGEQYLALNIGFD 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + +
Sbjct: 120 DPEMGTAILKDGGTIQDTKSAMVLED 145
>gi|325266929|ref|ZP_08133600.1| ABC superfamily ATP binding cassette transporter, binding protein
[Kingella denitrificans ATCC 33394]
gi|324981670|gb|EGC17311.1| ABC superfamily ATP binding cassette transporter, binding protein
[Kingella denitrificans ATCC 33394]
Length = 164
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ + + + G + + GL + ++
Sbjct: 1 MKKSILEFWVGLFVLLGVAALGVLAFQAAGGKSMGGGAQTYTVYASFDDIGGLKPQAPIK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + ++A I T GL G YI L
Sbjct: 61 TAGVLVGRVESIELDPKNF-QAKVRMSLDKKYAFSVDSSAKILTSGLLGEQYIGLEQG 117
>gi|251771478|gb|EES52055.1| putative ABC transporter [Leptospirillum ferrodiazotrophum]
Length = 525
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/353 (12%), Positives = 112/353 (31%), Gaps = 13/353 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T +G FV+ + F LS SVDGL + V G+ VG
Sbjct: 6 ETRLGFFVLLAVGTLVFLSLRLSHHTMKPEHSYAFYAEF-RSVDGLEKGTDVEVAGVKVG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L H+ + L+ + A I + G G Y+E+ +
Sbjct: 65 EVDSITLGP--SGHARVRMLVDKKVVIPADARAVIFSNGFLGKMYVEIEPGPSRIRPHLD 122
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + P + + ++ ++ ++ A +
Sbjct: 123 PSRD----------PENSGFLKKIFGALAPSLAFAAPQEGVPPTVTAPASNSSSAPAPSS 172
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ +++ + + + D + L+ E
Sbjct: 173 PSSGEVASPSPGEVLPGGTLAAKGTTVSVNRLIKKLNKVADDISAVSHSLKASIGTAEGK 232
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + N + ++ ++ +K+D + + + + + + + +
Sbjct: 233 EEIRRTLRHLDELTKNLRDFSKTLKESSPDILKKVDSIATKIDNGVGTIGSLVNKNDAYE 292
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
S ++ + +++I E D Q I + ++ NL+ + +K + + +K + +
Sbjct: 293 SANSSLAHLNSILEKIDDGQGTIGKLVNNPDVYDNLSKTLKKLSGVTNKADRM 345
>gi|309782893|ref|ZP_07677613.1| mce family protein [Ralstonia sp. 5_7_47FAA]
gi|308918317|gb|EFP63994.1| mce family protein [Ralstonia sp. 5_7_47FAA]
Length = 175
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VGLFV+ + F + + + ++ GL + V+
Sbjct: 1 MRKSVLDFWVGLFVLVGIIALLFLALKAGNMSSFSFAKTYQVKAAFDNIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ VGR+ + D + ++A + ++A + T GL G YI +
Sbjct: 61 SGVVVGRVSQILFD-DKSYQAIAVLDMDQRYQFPKDSSAKVLTSGLLGEQYIGIEPG 116
>gi|222109466|ref|YP_002551730.1| mammalian cell entry related domain-containing protein [Acidovorax
ebreus TPSY]
gi|221728910|gb|ACM31730.1| Mammalian cell entry related domain protein [Acidovorax ebreus
TPSY]
Length = 325
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FV+++ WL+R + SV GL ++VR+
Sbjct: 1 MENKSHALAAGIFVIAVAALLAGLGMWLTRDQ---TDYQLYELSSKDSVSGLQPQAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
G+ VG++ + D + + L + + D P+ P+T AT+ QG+ G+ +++
Sbjct: 58 KGVAVGKVTHIGFDPQVAGNVLIRIAVNADAPISPTTFATLGYQGVTGLAHVQ 110
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 60/241 (24%), Gaps = 12/241 (4%)
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
++ V + S TF T+ + ++ D + S
Sbjct: 77 NVLIRIAVNADAPISPTTFATLGYQGVTGLAHVQLDDAEAPLPAPPPGASGLPRLPLHSS 136
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
QE Q+I+ LL D + + S + R + +
Sbjct: 137 SFSQLAEQGPAILGQVQEATQRINTLLGDENQQRFSTALKQLGDAAGSIDQLARRLDNTV 196
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
D + + T + A + A R +
Sbjct: 197 TTRLDPALAGVPPLVQDTQQTLQALRQAGSSAATAAN------------DVSQAIRTLQA 244
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++I S+ F + L I + + + NPQ +++
Sbjct: 245 EGGALDEIAAGAKSLAGAADRFGRVTLPRINHAADETARAARRLGRTASGINDNPQSLIY 304
Query: 439 G 439
G
Sbjct: 305 G 305
>gi|59802416|ref|YP_209128.1| hypothetical protein NGO2118 [Neisseria gonorrhoeae FA 1090]
gi|59719311|gb|AAW90716.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|317165513|gb|ADV09054.1| hypothetical protein NGTW08_2103 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 187
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 24 MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 83
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 84 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 140
>gi|298506723|gb|ADI85446.1| conserved hypothetical protein [Geobacter sulfurreducens KN400]
Length = 331
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 34/320 (10%), Positives = 87/320 (27%), Gaps = 17/320 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K +G FV+ + + + S + + ++ GSV GLS + V F
Sbjct: 1 MSIKANKALIGAFVLGAICLAVAGVAVFG-SGKLFSSTKKFVMYFDGSVKGLSVGAPVVF 59
Query: 61 NGIPVGRIVGLFLDQ---EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG +V + L + A I D A Y
Sbjct: 60 RGVKVGSVVDIVLQGNLRDMTFKVPVVAEIELDRLNMTDGAA-------NSTDYYRPLID 112
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
R + + + Q ++ + + E
Sbjct: 113 RGLRAQLQTQSLLTGQLM------VDFDFHPDKPARFVSDATGYPQIPTIPSTAEELAQK 166
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ + + +++++++ + + L+ ++D+ + +
Sbjct: 167 LEELPLRQLLERANAAVGGLERLLNSPHMQETPRSLNLAAADMRTLLKNIDREVALLSAD 226
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
I + + ++ +T E + L + +
Sbjct: 227 ARGAIGAATSTIRHADRVLDFEEGAPAETMKNLNETLAEARTSLRTLDETLDAVRSAASD 286
Query: 298 SAFLENIADSTSNMRSSISA 317
L + + ++ + +
Sbjct: 287 ERSLYQLRHALKDLGEASRS 306
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 20/215 (9%), Positives = 67/215 (31%), Gaps = 9/215 (4%)
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ +L + +F + T +++ L + + +
Sbjct: 120 QTQSLLTGQLMVDFDFHPDKPARFVSDATGYPQIPTIPSTAEELAQKLEELPLRQLLERA 179
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI- 356
+A + + ++ + N + D+ S I
Sbjct: 180 NAAVGGLERLLNSPHMQETPRSLNLAAADMRTLLKNIDREVALLSADARGAIGAATSTIR 239
Query: 357 --NNISALKENN--SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
+ + +E K+ + R + ++ + ++ + + + L +++ +
Sbjct: 240 HADRVLDFEEGAPAETMKNLNETLAEARTSLRTLDETLDAVRSAASD--ERSLYQLRHAL 297
Query: 413 RKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ L E ++ +R+P+ ++ G K +V+
Sbjct: 298 KDLGEASRSLGSLVDYLDRHPEALLRG--KPTVEE 330
>gi|218507224|ref|ZP_03505102.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
Brasil 5]
Length = 197
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 3/192 (1%)
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
+ T + + Q+ ++D L++ + D+ + + S
Sbjct: 2 QKFDETATTFNDFGKQAQDTLDRVDTLVAQIDPAKLKGSVDDISQATKDARAAVASIRDV 61
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN-SLFKDAQRAM 376
++ +++ I TI + + + LN +S + ++ K++ + + A+ A
Sbjct: 62 ANTVSGRQKDIDQTIQDVSQLANKLNSASTRIDGILIKVDALLGTDNTQFDVRASARDAG 121
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
R ++ +N I I +NLQ FS GL D+Q LV ++ TVN+ +D + NF+RNPQ +
Sbjct: 122 ILSRKVADNLNSRIGPIADNLQKFSSGGLRDVQTLVNDMRGTVNNLNDTITNFDRNPQRL 181
Query: 437 VWGREKGSVKIY 448
++G + +VK Y
Sbjct: 182 IFGGD--TVKQY 191
>gi|319761580|ref|YP_004125517.1| mammalian cell entry related domain protein [Alicycliphilus
denitrificans BC]
gi|330823448|ref|YP_004386751.1| Mammalian cell entry related domain-containing protein
[Alicycliphilus denitrificans K601]
gi|317116141|gb|ADU98629.1| Mammalian cell entry related domain protein [Alicycliphilus
denitrificans BC]
gi|329308820|gb|AEB83235.1| Mammalian cell entry related domain protein [Alicycliphilus
denitrificans K601]
Length = 162
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 46/133 (34%), Gaps = 1/133 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + Q + VI ++ GL ++VR
Sbjct: 1 MQHSKNDIWVGLFVLLGGAALVFLALQSANLLQLNFRSGYVITARFDNIGGLKPKAAVRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + I ++ I T GL G YI + +E
Sbjct: 61 AGVVVGRVQSISFD-DKTYQARVALEIEKRYAFPKDSSLKILTSGLLGDQYIGIEPGAEE 119
Query: 121 KKTIFQIATERNQ 133
Q
Sbjct: 120 DNLADGSMVTNTQ 132
>gi|322834660|ref|YP_004214687.1| Mammalian cell entry related domain protein [Rahnella sp. Y9602]
gi|321169861|gb|ADW75560.1| Mammalian cell entry related domain protein [Rahnella sp. Y9602]
Length = 188
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 1/123 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L F ++ I ++ GL + S V+
Sbjct: 1 MQTKKSEIWVGAFLIIALIAVIFLCLKVADIRSIGSDPTYRISADFDNIGGLKSGSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ + LD+ Y + + + ++T IRT GL G ++ L+ ++
Sbjct: 61 GGVVIGRVSSITLDKNYSPRVEMDIDQKYN-QIPSTSTLAIRTSGLLGEQFLALNIGFED 119
Query: 121 KKT 123
+
Sbjct: 120 PEM 122
>gi|187930305|ref|YP_001900792.1| Mammalian cell entry related domain-containing protein [Ralstonia
pickettii 12J]
gi|187727195|gb|ACD28360.1| Mammalian cell entry related domain protein [Ralstonia pickettii
12J]
Length = 175
Score = 100 bits (248), Expect = 4e-19, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VGLFV+ + F + + + ++ GL + V+
Sbjct: 1 MRKSVLDFWVGLFVLVGIIALLFLALKAGNMSSFSFAKTYQVKAAFDNIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ VGR+ + D + ++A + ++A + T GL G YI +
Sbjct: 61 SGVVVGRVSQILFD-DKSYQAIAVLDMDQRYQFPKDSSAKVLTSGLLGEQYIGIEPG 116
>gi|94498326|ref|ZP_01304885.1| Mammalian cell entry related protein [Sphingomonas sp. SKA58]
gi|94422206|gb|EAT07248.1| Mammalian cell entry related protein [Sphingomonas sp. SKA58]
Length = 313
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 2/131 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ + V L V ++ WL +S + DG E ++ SVDG+ S V
Sbjct: 1 METRSNWLKVSLVVGLLIAAVIGFTLWLIQSREADGATYE--VQFKQSVDGVQIGSGVNL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ + L P + + ++ D L+ TA+I G I L+ K
Sbjct: 59 LGVPVGKVTQVRLQPSNPGTVMVRFVLTKDILLHRGVTASIDKSFFDGSAEISLAGSNKR 118
Query: 121 KKTIFQIATER 131
+ + A +
Sbjct: 119 EPALTVQAGQP 129
>gi|224418848|ref|ZP_03656854.1| ABC transporter permease [Helicobacter canadensis MIT 98-5491]
gi|253828163|ref|ZP_04871048.1| ABC-type transport system, periplasmic component [Helicobacter
canadensis MIT 98-5491]
gi|313142366|ref|ZP_07804559.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253511569|gb|EES90228.1| ABC-type transport system, periplasmic component [Helicobacter
canadensis MIT 98-5491]
gi|313131397|gb|EFR49014.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 265
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/166 (16%), Positives = 67/166 (40%), Gaps = 3/166 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G+F +++L I+W+ + ++ E I +G+ ++ V++
Sbjct: 1 METRLNYVLLGVFFIAVLLALAGFIFWMGKYDRNLSEYNEYYIYNKELPNGIRVETPVKY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + L ++ + L + +++QGL G ++ L + +
Sbjct: 61 LGLPVGFVRHYQLSGN---EVEIVVWVQKEIILNEGSKVAVQSQGLTGGNFLTLIQGKGK 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+ Q A + I S ++ E + ++ +
Sbjct: 118 PFSQSQKAILGFKENWIEQVSSKAENVMAQLETSLERFNQLLNDKN 163
>gi|241664473|ref|YP_002982833.1| Mammalian cell entry related domain-containing protein [Ralstonia
pickettii 12D]
gi|240866500|gb|ACS64161.1| Mammalian cell entry related domain protein [Ralstonia pickettii
12D]
Length = 175
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VGLFV+ + F + + + ++ GL + V+
Sbjct: 1 MRKSVLDFWVGLFVLVGIIALLFLALKAGNMSSFSFAKTYQVKAAFDNIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ VGR+ + D + ++A + ++A + T GL G YI +
Sbjct: 61 SGVVVGRVSQILFD-DKSYQAIAVLDMDQRYQFPRDSSAKVLTSGLLGEQYIGIEPG 116
>gi|113869372|ref|YP_727861.1| ABC-type transporter, periplasmic component involved in toluene
tolerance [Ralstonia eutropha H16]
gi|113528148|emb|CAJ94493.1| ABC-type transporter, periplasmic component involved in toluene
tolerance [Ralstonia eutropha H16]
Length = 170
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV + F + + + ++ GL + V+
Sbjct: 1 MKKNALDFWVGLFVAAGFVAVLFLALKAGNMSAFSFQDTYSVQARFDNIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + + T+A I T GL G YI L
Sbjct: 61 AGVVVGRVAAIRFD-DKTYQATVEMSLEKRYQFPKDTSAKILTSGLLGEQYIGLEAG 116
>gi|258592960|emb|CBE69269.1| Mce-related protein [NC10 bacterium 'Dutch sediment']
Length = 146
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 4/117 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T VGLFVV + + L R V + SV GL + V
Sbjct: 1 MKRLTMETLVGLFVVVGIVSLAWLSIRLGRLEVVGDRGYPVSAQF-DSVAGLKNGAVVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + LD ++ I D L +IRT+GL G Y+ ++
Sbjct: 60 AGVEIGRVKTIRLD---SYRAVVVMSIDSDVKLQDDAIVSIRTKGLIGEKYVRITPG 113
>gi|217969319|ref|YP_002354553.1| hypothetical protein Tmz1t_0890 [Thauera sp. MZ1T]
gi|217506646|gb|ACK53657.1| Mammalian cell entry related domain protein [Thauera sp. MZ1T]
Length = 156
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VGLFV F + + DG + ++ GL + V+
Sbjct: 2 MSRTALDLWVGLFVAIGFAALVFLAMKVGNFSGLDGAETYRVEAPFDNIGGLKVRAPVKS 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ VGR+ + D + I TTA+I T GL G Y+ L
Sbjct: 62 SGVLVGRVAVIRFDPAIYRAV-VELEIDKRYAFPADTTASILTSGLLGEQYVGLEAG 117
>gi|241762836|ref|ZP_04760899.1| Mammalian cell entry related domain protein [Acidovorax delafieldii
2AN]
gi|241368011|gb|EER62216.1| Mammalian cell entry related domain protein [Acidovorax delafieldii
2AN]
Length = 162
Score = 100 bits (247), Expect = 5e-19, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 1/133 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ + F + + + ++ GL ++VR
Sbjct: 1 MQQSKNDVWVGLFVMLGVAALVFLALQSANLLHLNFQTGYRVTARFDNIGGLKPKAAVRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + + ++ I T GL G YI + E
Sbjct: 61 AGVVVGRVESITFD-DKTFQARVTLELDKRYAFPKDSSLKILTSGLLGEQYIGIEAGADE 119
Query: 121 KKTIFQIATERNQ 133
K Q
Sbjct: 120 KNLAAGDTVSATQ 132
>gi|290476801|ref|YP_003469712.1| putative ABC transporter periplasmic binding protein [Xenorhabdus
bovienii SS-2004]
gi|289176145|emb|CBJ82950.1| putative transport protein (ABC superfamily, peri_bind)
[Xenorhabdus bovienii SS-2004]
Length = 168
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG FV+ L F ++ + + ++ GL S V+
Sbjct: 1 MQNKKNEIWVGCFVLIALAAIVFLCLKVADVRSFGSQTTYRVSAAFDNIGGLKVRSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ ++LD + + + + +++ +IRT GL G Y+ ++
Sbjct: 61 GGVVIGRVERIWLDHKTYTP-QVELELFTQYDNIPSTSSLSIRTSGLLGEQYVAMNVGFY 119
Query: 120 EKKT 123
+
Sbjct: 120 DPDM 123
>gi|312795843|ref|YP_004028765.1| Toluene transport system Ttg2C protein [Burkholderia rhizoxinica
HKI 454]
gi|312167618|emb|CBW74621.1| Toluene transport system Ttg2C protein [Burkholderia rhizoxinica
HKI 454]
Length = 225
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + ++ GL ++V+
Sbjct: 33 MKKNALDFWVGLFVVLGFVALLFLALKAGNMSSLSFQSTYSVKMKFDNIGGLKPRAAVKS 92
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + +L + ++A I T GL G YI L
Sbjct: 93 AGVMVGRVQSIEFDTQTY-QALVTIDVFKPYTFPKDSSAKILTSGLLGEQYIGLDPG 148
>gi|77918064|ref|YP_355879.1| ABC transporter protein [Pelobacter carbinolicus DSM 2380]
gi|77544147|gb|ABA87709.1| ABC-type transport system protein [Pelobacter carbinolicus DSM
2380]
Length = 148
Score = 100 bits (247), Expect = 6e-19, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ N +VG+F+V+ + L + + + R GSV GL + V
Sbjct: 1 MKRFNVEMAVGIFLVAGFICFAYLSVKLGDVDWFGDKTYAISARF-GSVSGLKEGAVVEL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + LD E L I L + A+IRT G+ G Y+E+S E
Sbjct: 60 AGVKIGTVSRITLDPEKYEAVL-GMDIDAKVQLQEDSIASIRTSGIIGDKYVEVSPGGME 118
Query: 121 KKTIFQIATERNQ 133
+
Sbjct: 119 DYIQPGGEIYETE 131
>gi|225848327|ref|YP_002728490.1| mce related protein [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644731|gb|ACN99781.1| mce related protein [Sulfurihydrogenibium azorense Az-Fu1]
Length = 516
Score = 100 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 54/372 (14%), Positives = 125/372 (33%), Gaps = 22/372 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
VG+FV+ I F I S G + GLS + V+ G+
Sbjct: 3 NSVKVGIFVLVISGLLGFLIIKFSGKE--FGQNYKEYFVYFTDAQGLSQGADVQVQGVKS 60
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + +Q K +R + P+Y IRT GL G Y+ + +
Sbjct: 61 GKVEEIKFEQ---GKVKVKFKVRQEIPIYKDAKVVIRTYGLMGDKYLYVEPGNPSSGELV 117
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
N I++ E ++ S++ ++++N+ K L
Sbjct: 118 SGGVIENTT------------KIASTEEMIDQVRLSAKKFGELMDNLNKALGDERLKKLI 165
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
++ + + V ++ + + + S+ + + N EN
Sbjct: 166 EDFDKFAYNTNEVVVQNKEDVRQAIANIRAITAELRQKLPSITENLDKTLENTKNITDEN 225
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ D + +T + + +I+ +S+ ++ +ENI
Sbjct: 226 REDIRKLIANLKDLSVALKEKAPKTLDSVDKAATEIEKAVSENR-----QDLRLSIENIK 280
Query: 306 DSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKEN 365
++ N+ ++ + E K+++ + N+ + ++ F + + E
Sbjct: 281 KASDNLNQILAKVNEGKGTLGKLVNEDSFYNNVNEGVKSFAEPFKVVKESNLEVIMQGEK 340
Query: 366 NSLFKDAQRAMH 377
++ KD++
Sbjct: 341 HTGNKDSKAGAA 352
>gi|83748498|ref|ZP_00945519.1| Hypothetical exported protein [Ralstonia solanacearum UW551]
gi|207742156|ref|YP_002258548.1| abc-type transport system involved in resistance to organic
solvents, periplasmic component protein [Ralstonia
solanacearum IPO1609]
gi|83724802|gb|EAP71959.1| Hypothetical exported protein [Ralstonia solanacearum UW551]
gi|206593544|emb|CAQ60471.1| abc-type transport system involved in resistance to organic
solvents, periplasmic component protein [Ralstonia
solanacearum IPO1609]
Length = 333
Score = 100 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 102/298 (34%), Gaps = 6/298 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + GLF + + F ++ W +R + +V+GLS ++V++
Sbjct: 1 MENRAHAFLAGLFTIGLAIFVALAVVWFNRDQTV---RVPYDVVTRSTVNGLSPQAAVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRK 119
G+ VG++ + D + P + + L+ D P+ +T + QG+ G+ Y++
Sbjct: 58 RGLDVGKVDTIRFDDKVPGQIIVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYD 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
K + + + ++ + + + ++
Sbjct: 118 SGKRAGNPTRLETSDRRPARIAMEAGFLDELDKRGDQMLTRLDQTLGSLATMLDDEHRQA 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ ++ + + + + T L SL +
Sbjct: 178 LMAAVHAFQGTMDSYGALARQAEPAMRKLPQIADNLDATLAATRRLSQSLSDPKGPLMGT 237
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + S + + T+ + + ++ + DH ++DF+S+ +S
Sbjct: 238 LASAGSDLSSASQSMQAATQALTYETLPQLNGVAREARQAVRSFDHAVTDFNSRPQSV 295
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 2/133 (1%)
Query: 314 SISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKD 371
+ + T+++ + + +K ++ ++ A + SL
Sbjct: 171 DDEHRQALMAAVHAFQGTMDSYGALARQAEPAMRKLPQIADNLDATLAATRRLSQSLSDP 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
M T ++ S+ Q + L + + R+ ++ V FD + +F
Sbjct: 231 KGPLMGTLASAGSDLSSASQSMQAATQALTYETLPQLNGVAREARQAVRSFDHAVTDFNS 290
Query: 432 NPQDIVWGREKGS 444
PQ +++G +
Sbjct: 291 RPQSVLFGPAPAT 303
>gi|319409727|emb|CBY90033.1| conserved hypothetical integral membrane protein [Neisseria
meningitidis WUE 2594]
gi|325133422|gb|EGC56086.1| mce family protein [Neisseria meningitidis M13399]
gi|325141490|gb|EGC63963.1| mce family protein [Neisseria meningitidis 961-5945]
gi|325143673|gb|EGC65992.1| mce family protein [Neisseria meningitidis M01-240013]
gi|325199053|gb|ADY94509.1| mce family protein [Neisseria meningitidis G2136]
gi|325204914|gb|ADZ00368.1| mce family protein [Neisseria meningitidis M01-240355]
gi|325206869|gb|ADZ02322.1| mce family protein [Neisseria meningitidis M04-240196]
Length = 164
Score = 100 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + + G + GL ++ V+
Sbjct: 1 MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGNSGKTYTVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|56476143|ref|YP_157732.1| mce related protein [Aromatoleum aromaticum EbN1]
gi|56312186|emb|CAI06831.1| Mce related protein [Aromatoleum aromaticum EbN1]
Length = 155
Score = 100 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG FVV + F + + + VI ++ GL + V+
Sbjct: 1 MSRTTLDLWVGFFVVIGMAALLFLSLKVGNLASANFSESYVIKAQFDNIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + ++ T ATI T GL G Y+ L
Sbjct: 61 AGVVVGRVTDIRFD-TGSYRAEVTFVVDTRFQFPRDTIATILTSGLLGEQYLGLEPG 116
>gi|218461267|ref|ZP_03501358.1| putative ABC transporter, substrate-binding protein [Rhizobium etli
Kim 5]
Length = 110
Score = 100 bits (246), Expect = 6e-19, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 63/106 (59%), Gaps = 2/106 (1%)
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
N +S + ++ K++ + S+F A+ + +F+ ++ +N I I +NLQ FS
Sbjct: 1 NSASTRIDGILIKVDALLGTDNTQSMFAQARETLESFKKVADNLNARIGPIADNLQKFSS 60
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
GL D+Q LV ++ TVN+ ++ + NF+RNPQ +++G + +VK Y
Sbjct: 61 GGLRDVQTLVNDMRGTVNNLNETITNFDRNPQRLIFGGD--TVKQY 104
>gi|254804223|ref|YP_003082444.1| probable outer membrane transport protein [Neisseria meningitidis
alpha14]
gi|254667765|emb|CBA03697.1| probable outer membrane transport protein [Neisseria meningitidis
alpha14]
Length = 165
Score = 100 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 1 MKKNILEFWVGLFVLIGAAAVGFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|15605967|ref|NP_213344.1| hypothetical protein aq_494 [Aquifex aeolicus VF5]
gi|2983143|gb|AAC06746.1| putative protein [Aquifex aeolicus VF5]
Length = 253
Score = 100 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+G FVV++ F + + M E ++ V GLS + VR +G+
Sbjct: 40 TTELKLGAFVVAVSLAFAFLVLTFGEIPFFQPKMKEYLVYFDE-VAGLSKGAEVRVSGVR 98
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
G++ + L+ ++ + P+Y A+I T GL G Y+ + E +
Sbjct: 99 AGKVKEIILE---RGKVKVVFEVKEEIPIYRDAIASIGTLGLMGDKYLAVKPGSPESGEL 155
Query: 125 FQIATERN 132
+ +N
Sbjct: 156 PPRSEIKN 163
>gi|158521032|ref|YP_001528902.1| hypothetical protein Dole_1015 [Desulfococcus oleovorans Hxd3]
gi|158509858|gb|ABW66825.1| Mammalian cell entry related domain protein [Desulfococcus
oleovorans Hxd3]
Length = 321
Score = 100 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 65/153 (42%), Gaps = 2/153 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S VGLF++ + + ++ ++ ++ Y + + SV GL+ DS V++
Sbjct: 1 MASMRTNFIVGLFLIIGIAVTAATVIYVGATS-YFQKGSLYVSYFDESVQGLNKDSPVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ + + ++ I PD T A +++ G+ GI ++EL +
Sbjct: 60 RGVSIGQVHDIRISKDD-RLIEVMLRIDPDWKPGTDTIAQLKSIGITGIMFVELDLKKPG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ + + +I PS I +
Sbjct: 119 ESVLLPTPAHASTYPVIPTRPSDIRELLGGVTE 151
>gi|312797430|ref|YP_004030352.1| hypothetical protein RBRH_02223 [Burkholderia rhizoxinica HKI 454]
gi|312169205|emb|CBW76208.1| Hypothetical exported protein [Burkholderia rhizoxinica HKI 454]
Length = 345
Score = 100 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 55/306 (17%), Positives = 109/306 (35%), Gaps = 14/306 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + +L +I W + + +V GL D++VR+
Sbjct: 27 MENKSHAFWAGLFTIVLLVAIALTIAWF---SMDRTERVPYDLVATTNVTGLRADAAVRY 83
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + D P + + L+ PL S+ A++ QG+ G+ +I+L +
Sbjct: 84 RGLAVGNVQNIHFDTHRPGRIVIRILVDKRVPLTHSSFASLGLQGVTGLGFIQLDDTGDD 143
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ Q M + ++ + Q E + T
Sbjct: 144 LHPLISSDENVAQIPMRPG--LFDDLQRRGVALLNQMEKIAVNLQQMTDEPNRRQYLATA 201
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+I+ ++ +A H++ + T + + S A +L +V
Sbjct: 202 RSIQDAASGVAALTQHLEPVTRKLPDTIDELNRTMGSVNVLATSLSNPNGPVAANLNRVG 261
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q E V+ S ++ T + E +++ L D M+S ++A
Sbjct: 262 QAAEQAGVALAQLDTSMQEL---------TARVGYETLPRVNSLADDVRQAMRSVHSAAG 312
Query: 301 LENIAD 306
N
Sbjct: 313 AINANP 318
Score = 44.5 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 19/166 (11%), Positives = 51/166 (30%), Gaps = 5/166 (3%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
F ++ ++ LL+ + + N + RS A + Q +
Sbjct: 164 FDDLQRRGVALLNQMEKIAVNLQQMTDEPNRRQYLATARSIQDAASGVAALTQHLEPVTR 223
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + LN + L + ++N + + + R + + S+
Sbjct: 224 KLPDTIDELNRTMGSVNVLATSLSNPNG-----PVAANLNRVGQAAEQAGVALAQLDTSM 278
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L + +L +++ + NP+ +++G
Sbjct: 279 QELTARVGYETLPRVNSLADDVRQAMRSVHSAAGAINANPRALLFG 324
>gi|57505620|ref|ZP_00371547.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
gi|57016167|gb|EAL52954.1| conserved hypothetical protein [Campylobacter upsaliensis RM3195]
Length = 295
Score = 100 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F+ + F S + WL ++ + I SV GL + VR
Sbjct: 1 MENKASYFWVGIFIFGVFFASLIFMLWLGGYSEEESFEYY-EIHTQESVAGLGLKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + ++ +TP+ T AT++ QG+ G+ +I+L
Sbjct: 60 LGVEVGSVENISIYTKQNLEVNILIKVKKETPIKEDTFATLQLQGITGLKFIQLQGGSVN 119
Query: 121 KKTI 124
K +
Sbjct: 120 SKKL 123
>gi|300692711|ref|YP_003753706.1| ABC-type transporter periplasmic component (resistance to organic
solvents) [Ralstonia solanacearum PSI07]
gi|299079771|emb|CBJ52448.1| putative ABC-type transporter, periplasmic component (resistance to
organic solvents) [Ralstonia solanacearum PSI07]
Length = 330
Score = 100 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 40/298 (13%), Positives = 105/298 (35%), Gaps = 6/298 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + GLF + ++ F ++ W +R + +V+GLS +SV++
Sbjct: 1 MENRAHAFLAGLFTIGLVIFIALAVVWFNRDQTV---RVPYEVVTRSTVNGLSPQASVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRK 119
G+ VG++ + D + P + + L+ D P+ +T + QG+ G+ Y++
Sbjct: 58 RGLDVGKVDTIRFDDKVPGQIVVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYD 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + + ++ + + + +
Sbjct: 118 GGRRAASPTRLETSDKHPARIAMEAGFLDELDKRGDQMLTKLDQTLSSLSALFDDEHRQA 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ ++ + + + T + + T L SL +
Sbjct: 178 LMAAMRSFQGTMDSYNALARQAEPTVRKLPQIADNLDATLAATRRLSQSLSDPKGPLMGT 237
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
N + S + ++ T+ + + ++ + DH ++DF+++ +S
Sbjct: 238 LANASSDLSSASQSMQAATNVLTYETLPQLNGFAREARQAVRSFDHAVTDFNTRPQSV 295
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 57/168 (33%), Gaps = 12/168 (7%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
E+ ++ D +L+ + S E+ + MRS + ++
Sbjct: 142 AGFLDELDKRGDQMLTKLDQTLSSLSALFDDEHRQALMAAMRSFQGTMDSYNALARQAEP 201
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
T+ + I NL+ + L +++ M T + S ++
Sbjct: 202 TVRKLPQIADNLDATLAATRRLSQSLSDPKG------------PLMGTLANASSDLSSAS 249
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
S+ + L + R+ ++ V FD + +F PQ +++
Sbjct: 250 QSMQAATNVLTYETLPQLNGFAREARQAVRSFDHAVTDFNTRPQSVLF 297
>gi|242241046|ref|YP_002989227.1| hypothetical protein Dd703_3648 [Dickeya dadantii Ech703]
gi|242133103|gb|ACS87405.1| Mammalian cell entry related domain protein [Dickeya dadantii
Ech703]
Length = 190
Score = 100 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 53/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + VG F++ L F ++ + ++ GL S V+
Sbjct: 1 MQTKKHEIWVGAFMLIALVAILFLALKVADLKSLGNQQTYRLYATFDNIGGLKIRSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVAEIGLDSKTY-LPRVALDIDRQYDHIPDTSSLAIRTSGLLGEQYLALNIGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ I + + +
Sbjct: 120 DADMGTSIFKDGGTIQDTKSAMVLED 145
>gi|222109933|ref|YP_002552197.1| mammalian cell entry related domain-containing protein [Acidovorax
ebreus TPSY]
gi|221729377|gb|ACM32197.1| Mammalian cell entry related domain protein [Acidovorax ebreus
TPSY]
Length = 161
Score = 100 bits (246), Expect = 7e-19, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + + + ++ GL ++VR
Sbjct: 1 MQHSKNDFWVGLFVLLGGAALVFLALQSANLLNLNFRSGYTVTARFDNIGGLKPKAAVRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + + ++ I T GL G YI + E
Sbjct: 61 AGVVVGRVQSIGFD-DTTYQARVTLELEKRYVFPKDSSLKILTSGLLGDQYIGIEPGADE 119
Query: 121 KK 122
Sbjct: 120 NN 121
>gi|194290963|ref|YP_002006870.1| ABC transporter periplasmic protein [Cupriavidus taiwanensis LMG
19424]
gi|193224798|emb|CAQ70809.1| putative ABC-type transporter, periplasmic binding component
[Cupriavidus taiwanensis LMG 19424]
Length = 170
Score = 100 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 41/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VGLFV + F + + + ++ GL + V+
Sbjct: 1 MRKNTLDFWVGLFVAAGFVALLFLALKAGNMSAFSFQDTYTVQARFDNIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + + T+A I T GL G YI L
Sbjct: 61 AGVVVGRVAAIRFD-DKTYQATVEMSLETRYQFPKDTSAKILTSGLLGEQYIGLEAG 116
>gi|157164450|ref|YP_001466750.1| mce related protein [Campylobacter concisus 13826]
gi|112799979|gb|EAT97323.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter concisus 13826]
Length = 313
Score = 100 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 57/123 (46%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++N YT VG+F ++ L I+W++ N E I GL DS+V+F
Sbjct: 1 MENRNSYTIVGMFFIACLTAFAIFIWWMTSKNNTKVDFKEYYIHTTELPSGLKVDSTVKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P G + + + IR D P+ + A+I Q ++G+ I +S K+
Sbjct: 61 IGVPAGSVSDINFVDDKNALINITMKIREDLPIKADSIASIEVQAISGVASINISRGTKD 120
Query: 121 KKT 123
K
Sbjct: 121 FKP 123
>gi|194100077|ref|YP_002003217.1| hypothetical protein NGK_2592 [Neisseria gonorrhoeae NCCP11945]
gi|239998069|ref|ZP_04717993.1| hypothetical protein Ngon3_01093 [Neisseria gonorrhoeae 35/02]
gi|240013250|ref|ZP_04720163.1| hypothetical protein NgonD_01135 [Neisseria gonorrhoeae DGI18]
gi|240015697|ref|ZP_04722237.1| hypothetical protein NgonFA_00768 [Neisseria gonorrhoeae FA6140]
gi|240079832|ref|ZP_04724375.1| hypothetical protein NgonF_00746 [Neisseria gonorrhoeae FA19]
gi|240112040|ref|ZP_04726530.1| hypothetical protein NgonM_00380 [Neisseria gonorrhoeae MS11]
gi|240114787|ref|ZP_04728849.1| hypothetical protein NgonPID1_00778 [Neisseria gonorrhoeae PID18]
gi|240116988|ref|ZP_04731050.1| hypothetical protein NgonPID_00758 [Neisseria gonorrhoeae PID1]
gi|240120322|ref|ZP_04733284.1| hypothetical protein NgonPI_00815 [Neisseria gonorrhoeae PID24-1]
gi|240122626|ref|ZP_04735582.1| hypothetical protein NgonP_01541 [Neisseria gonorrhoeae PID332]
gi|240124813|ref|ZP_04737699.1| hypothetical protein NgonSK_01075 [Neisseria gonorrhoeae SK-92-679]
gi|240127330|ref|ZP_04739991.1| hypothetical protein NgonS_01540 [Neisseria gonorrhoeae SK-93-1035]
gi|254492849|ref|ZP_05106020.1| outer membrane transporter [Neisseria gonorrhoeae 1291]
gi|268593921|ref|ZP_06128088.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268595977|ref|ZP_06130144.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268598098|ref|ZP_06132265.1| outer membrane transporter [Neisseria gonorrhoeae MS11]
gi|268600441|ref|ZP_06134608.1| outer membrane transporter [Neisseria gonorrhoeae PID18]
gi|268602672|ref|ZP_06136839.1| outer membrane transporter [Neisseria gonorrhoeae PID1]
gi|268681222|ref|ZP_06148084.1| outer membrane transporter [Neisseria gonorrhoeae PID332]
gi|268683392|ref|ZP_06150254.1| outer membrane transporter [Neisseria gonorrhoeae SK-92-679]
gi|268685699|ref|ZP_06152561.1| outer membrane transporter [Neisseria gonorrhoeae SK-93-1035]
gi|193935367|gb|ACF31191.1| Conserved hypothetical protein [Neisseria gonorrhoeae NCCP11945]
gi|226511889|gb|EEH61234.1| outer membrane transporter [Neisseria gonorrhoeae 1291]
gi|268547310|gb|EEZ42728.1| conserved hypothetical protein [Neisseria gonorrhoeae 35/02]
gi|268549765|gb|EEZ44784.1| conserved hypothetical protein [Neisseria gonorrhoeae FA19]
gi|268582229|gb|EEZ46905.1| outer membrane transporter [Neisseria gonorrhoeae MS11]
gi|268584572|gb|EEZ49248.1| outer membrane transporter [Neisseria gonorrhoeae PID18]
gi|268586803|gb|EEZ51479.1| outer membrane transporter [Neisseria gonorrhoeae PID1]
gi|268621506|gb|EEZ53906.1| outer membrane transporter [Neisseria gonorrhoeae PID332]
gi|268623676|gb|EEZ56076.1| outer membrane transporter [Neisseria gonorrhoeae SK-92-679]
gi|268625983|gb|EEZ58383.1| outer membrane transporter [Neisseria gonorrhoeae SK-93-1035]
Length = 164
Score = 100 bits (246), Expect = 8e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 1 MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|157803408|ref|YP_001491957.1| ABC transporter substrate binding protein [Rickettsia canadensis
str. McKiel]
gi|157784671|gb|ABV73172.1| ABC transporter substrate binding protein [Rickettsia canadensis
str. McKiel]
Length = 150
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G FVV I+ F + + + +V S +G++ S V
Sbjct: 1 MKQNVIETIIG-FVVLIIVLLFLIFAYKTGYSITSSKGYQVTANF-QSAEGIAVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+GI +G I + LD +++ I D + + A + T GL G YI +
Sbjct: 59 SGIKIGSIKKITLDPNSF-YAIVYLNINDDVKIPKDSKAQVVTSGLFGSKYISIVPGND 116
>gi|289662618|ref|ZP_06484199.1| ABC transporter substrate-binding protein [Xanthomonas campestris
pv. vasculorum NCPPB702]
gi|289668437|ref|ZP_06489512.1| ABC transporter substrate-binding protein [Xanthomonas campestris
pv. musacearum NCPPB4381]
Length = 308
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 52/297 (17%), Positives = 99/297 (33%), Gaps = 13/297 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI-------- 172
+ A +++ +I TPS + A +++ +
Sbjct: 120 APAL--TAIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATLQNLEKI 177
Query: 173 --EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+S A + + I + + +
Sbjct: 178 SGGIADRDDGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVK 237
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + N + EN ++ Q+ T+ ++R + + V K+D+ +
Sbjct: 238 LDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPAR 294
Score = 73.0 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 70/200 (35%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + Q + ++ + ++ + +N+A ++ +
Sbjct: 112 QLSGGTPEAPALTAIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D+ + + I + + NL+ + + +++ +++ + +
Sbjct: 172 QNLEKISGGIADRDDGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILEK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|30250307|ref|NP_842377.1| mce related protein [Nitrosomonas europaea ATCC 19718]
gi|30181102|emb|CAD86294.1| mce related protein [Nitrosomonas europaea ATCC 19718]
Length = 159
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV++ + + + + V++ ++ GL + V+
Sbjct: 1 MQRTMMDFWVGLFVMAGIGALLVLGLKVGNLTDFQPEGSYVLVGNFENIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + + + + T A+I T GL G YI L E
Sbjct: 61 AGVVVGRVTDIQFSVQTYDAV-VTMKVDTRYQFPKDTFASILTSGLLGEQYIGLLPGGDE 119
Query: 121 KK 122
+
Sbjct: 120 EM 121
>gi|85858834|ref|YP_461036.1| organic solvents resistance ABC transporter periplasmic protein
[Syntrophus aciditrophicus SB]
gi|85721925|gb|ABC76868.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Syntrophus
aciditrophicus SB]
Length = 493
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 4/131 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + VGLFV+ L + + + + V + +V GL D+SV+
Sbjct: 1 MTAISSEAKVGLFVLVGLIILGYMSFRVGQQGFGLKKGYRVEVAF-DNVSGLEKDASVQI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ + L ++ I PD L A+I+T G+ G YIELS K
Sbjct: 60 AGVEMGRVESIRL---KDGKAMVTLRINPDVKLERDVMASIKTHGVLGDKYIELSPGTKG 116
Query: 121 KKTIFQIATER 131
+ I
Sbjct: 117 EGYIAPGGQIA 127
>gi|51246138|ref|YP_066022.1| hypothetical protein DP2286 [Desulfotalea psychrophila LSv54]
gi|50877175|emb|CAG37015.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 173
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 2/122 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K VG+F+++ F+ L ++ + SV GL + V
Sbjct: 24 MVQKKIEFYVGVFIIAGCLCFFWLFTALGGADWNRSDKYPI-FGFFTSVSGLKVGAEVEM 82
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ + LD + + + + L T A+++T G+ G YI LS E
Sbjct: 83 AGVEIGRVKSIILDTTRY-VAKVELSLNKEVELSDDTIASVKTSGIIGDKYINLSAGGSE 141
Query: 121 KK 122
Sbjct: 142 DM 143
>gi|237747196|ref|ZP_04577676.1| predicted protein [Oxalobacter formigenes HOxBLS]
gi|229378547|gb|EEO28638.1| predicted protein [Oxalobacter formigenes HOxBLS]
Length = 293
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF V L + I W ++ +I S+ GL+ ++VRF
Sbjct: 2 MENKSHAFIAGLFTV-CLVAAALLIVWFLNMDRTVR--VPYMIATNQSIPGLNPQATVRF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + + + P L ++ DTP+ ST AT+ QG+ GI +ELS +
Sbjct: 59 RGLDVGRVTNIGFNPKEPGEILIHFEVKEDTPMTKSTFATLTYQGVTGIASVELSDDGSD 118
Query: 121 KKTIFQIATERNQRA 135
++ + +
Sbjct: 119 REKLVTSPENPAEIP 133
>gi|218245389|ref|YP_002370760.1| Mammalian cell entry related domain-containing protein [Cyanothece
sp. PCC 8801]
gi|257058425|ref|YP_003136313.1| hypothetical protein Cyan8802_0530 [Cyanothece sp. PCC 8802]
gi|218165867|gb|ACK64604.1| Mammalian cell entry related domain protein [Cyanothece sp. PCC
8801]
gi|256588591|gb|ACU99477.1| Mammalian cell entry related domain protein [Cyanothece sp. PCC
8802]
Length = 465
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 54/428 (12%), Positives = 125/428 (29%), Gaps = 46/428 (10%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF + L + WL ++ V GL + V F G+ VG+I
Sbjct: 12 VGLFALIGLVLFGGLVIWLRG-GVLGQKPYQIQANF-QDVSGLQIGAPVNFRGVAVGKIT 69
Query: 70 GLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
L + + + +T I GL G ++++ EK + +A
Sbjct: 70 ALQASSNG---VTVLIEVSSRELRIPIGSTIQINRYGLIGEASVDITP--SEKLSDQALA 124
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + E S+ + +R +
Sbjct: 125 VDPTSEECPDKQLIICDNDTLDGETGSQLVQALTRLSNAYSDP----------------- 167
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ ++ + + + + + Q + QI + +
Sbjct: 168 ------EFVKELKGAFTSVAQAGTKIGKLSDEAAIFSKTARREIQGTSQTIAQINQAARD 221
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+S + V + + ++ L+S+ + + N + T
Sbjct: 222 ASQLMRNVNTVVSENRESLNRAVNNAASLVNNLNGLVSENRGNVINT------LNSLERT 275
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
S+ ++ T + I+ I +L AE + + +IS + ++
Sbjct: 276 SDEVRMVAIGLGKTVNKVNSGIDEVNIKKIARDLEILMANAAETSANLRDISQSFNDPTV 335
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + + R T E + + + +++ +N + L+
Sbjct: 336 ILTVQKTLDSARATFENAQKITSDVEELTGD---------PAFRDNVRKLINGLSNLLSY 386
Query: 429 FERNPQDI 436
+ Q I
Sbjct: 387 TNQLEQQI 394
>gi|85373089|ref|YP_457151.1| ABC-type transport system periplasmic component [Erythrobacter
litoralis HTCC2594]
gi|84786172|gb|ABC62354.1| ABC-type transport system periplasmic component [Erythrobacter
litoralis HTCC2594]
Length = 316
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 48/297 (16%), Positives = 99/297 (33%), Gaps = 6/297 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VG +++L I W++R N+ G E I SV GL+T S V F
Sbjct: 1 METRANHIWVGAVSLALLAALAAFIIWIARFNE--GNQNEYDIFFQQSVSGLATGSQVSF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY--IELSTLR 118
G+PVG++ + L + P + ++ + P+ TTATI+ T
Sbjct: 59 AGVPVGQVSQIALWERDPEFVRVRIRVQEEVPILIGTTATIQGSFTGVSTILLDGARAGA 118
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
A + T + + + + R + ++ + LT
Sbjct: 119 PPIACDEASACPEGVPVIPTKPGGLGELLANAPLLLERLATLTERLTLTLSDDNQAALTG 178
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL--DKMIKAIDL 236
+AN ++ LA I+ + ++T + T ++ +A+ +
Sbjct: 179 ILANTNAMTEDLARATPRIEATLAELEITLREAGETLDAFESVTQSTDQLINQEGQALAV 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + + + +T Q + + +
Sbjct: 239 ELRGTLKSAAGALDSLGKTLEEAQPAARQLNNQTLPAANATLQDLRETSRALRAVTE 295
>gi|58580427|ref|YP_199443.1| hypothetical protein XOO0804 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622389|ref|YP_449761.1| hypothetical protein XOO_0732 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188578636|ref|YP_001915565.1| ABC transporter substrate-binding protein [Xanthomonas oryzae pv.
oryzae PXO99A]
gi|58425021|gb|AAW74058.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366329|dbj|BAE67487.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188523088|gb|ACD61033.1| ABC transporter substrate-binding protein [Xanthomonas oryzae pv.
oryzae PXO99A]
Length = 308
Score = 99.6 bits (245), Expect = 8e-19, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 109/304 (35%), Gaps = 11/304 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVALVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ +++ +I TPS + A R Q + + ++ T+
Sbjct: 120 APAL--TTIDKSDAPIIQTTPSALQNITDTAN------RIVERMDQMLSDKNVASISATL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
N+E IS +A++ + ++ + + + T TI L +L + + I +
Sbjct: 172 QNLEKISGGIADHDDGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKL 231
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+++ + N + + ++ L+ D + +
Sbjct: 232 DATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNN 291
Query: 299 AFLE 302
Sbjct: 292 PARY 295
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 69/200 (34%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + Q + ++ + ++ + +N+A ++ +
Sbjct: 112 QLSGGTPEAPALTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D + + I + + NL+ + + +++ +++ + +
Sbjct: 172 QNLEKISGGIADHDDGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILEK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|260441400|ref|ZP_05795216.1| hypothetical protein NgonDG_10020 [Neisseria gonorrhoeae DGI2]
Length = 164
Score = 99.6 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 1 MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|15677794|ref|NP_274958.1| hypothetical protein NMB1964 [Neisseria meningitidis MC58]
gi|218767465|ref|YP_002341977.1| putative outer membrane transport protein [Neisseria meningitidis
Z2491]
gi|7227224|gb|AAF42293.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|121051473|emb|CAM07766.1| putative outer membrane transport protein [Neisseria meningitidis
Z2491]
gi|254672982|emb|CBA07461.1| mce related protein [Neisseria meningitidis alpha275]
gi|261393292|emb|CAX50920.1| conserved hypothetical integral membrane protein [Neisseria
meningitidis 8013]
gi|316985592|gb|EFV64539.1| mce related family protein [Neisseria meningitidis H44/76]
gi|325129425|gb|EGC52256.1| mce family protein [Neisseria meningitidis OX99.30304]
gi|325137488|gb|EGC60073.1| mce family protein [Neisseria meningitidis ES14902]
gi|325201012|gb|ADY96467.1| mce family protein [Neisseria meningitidis H44/76]
gi|325201399|gb|ADY96853.1| mce family protein [Neisseria meningitidis M01-240149]
gi|325207380|gb|ADZ02832.1| mce family protein [Neisseria meningitidis NZ-05/33]
Length = 164
Score = 99.6 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 1 MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|94309015|ref|YP_582225.1| hypothetical protein Rmet_0070 [Cupriavidus metallidurans CH34]
gi|93352867|gb|ABF06956.1| ABC-type transporter, periplasmic component [Cupriavidus
metallidurans CH34]
Length = 313
Score = 99.6 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/297 (14%), Positives = 107/297 (36%), Gaps = 5/297 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K+ G+F + + S++W S + + +V+GL + V++
Sbjct: 1 MENKSNAFLAGVFTIGLAILVSVSLFWFSSDHTV---RVPYDLITRSTVNGLGPQADVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG+++ + D + P + + I DTP+ +T AT+ QG+ GI Y++L +
Sbjct: 58 RGLEVGKVLSIKFDPQVPGQIIVRISINHDTPITRTTYATLGFQGVTGIAYVQLDDSERT 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ +F + ++ + + + + +
Sbjct: 118 EGDTSSSPRLTTSAREPARIVMRPGFFEELEKRGDSLLTQAETLMASLDSMFQPANRDEL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A++ SH+ + + ++ + + + +
Sbjct: 178 MAAIRAVHKTADDYSHLKSTLQPAAEKLPKAVDNLNAALVSTKRLTDEIGNPDGTVMRTV 237
Query: 241 QILENIQVSSNNFVKSSDQV--INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ N + + V+S+ + T+ + + ++ + ID S F+ K S
Sbjct: 238 NRVGNDLQVAADSVQSTTTIVNQETLPQINGLARESRQAVRSIDRAASQFNDKPSSV 294
>gi|304388520|ref|ZP_07370623.1| ABC superfamily ATP binding cassette transporter, binding protein
[Neisseria meningitidis ATCC 13091]
gi|304337517|gb|EFM03683.1| ABC superfamily ATP binding cassette transporter, binding protein
[Neisseria meningitidis ATCC 13091]
gi|325131370|gb|EGC54079.1| mce family protein [Neisseria meningitidis M6190]
gi|325135555|gb|EGC58173.1| mce family protein [Neisseria meningitidis M0579]
gi|325139614|gb|EGC62154.1| mce family protein [Neisseria meningitidis CU385]
Length = 182
Score = 99.6 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 19 MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 78
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 79 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 135
>gi|161869246|ref|YP_001598413.1| putative ABC transport system substrate-binding protein [Neisseria
meningitidis 053442]
gi|161594799|gb|ABX72459.1| putative ABC transport system substrate-binding protein [Neisseria
meningitidis 053442]
gi|308390062|gb|ADO32382.1| putative ABC transport ATP-binding protein [Neisseria meningitidis
alpha710]
Length = 164
Score = 99.6 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 1 MKKNILEFWVGLFVLIGAAAVGFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|293397854|ref|ZP_06642060.1| ABC transport system substrate-binding protein [Neisseria
gonorrhoeae F62]
gi|291611800|gb|EFF40869.1| ABC transport system substrate-binding protein [Neisseria
gonorrhoeae F62]
Length = 178
Score = 99.6 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 15 MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 74
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 75 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 131
>gi|261401681|ref|ZP_05987806.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria lactamica ATCC 23970]
gi|269208207|gb|EEZ74662.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria lactamica ATCC 23970]
Length = 165
Score = 99.6 bits (245), Expect = 9e-19, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 1 MKKNVLEFWVGLFVLLGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QAKVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|320354121|ref|YP_004195460.1| Mammalian cell entry related domain-containing protein
[Desulfobulbus propionicus DSM 2032]
gi|320122623|gb|ADW18169.1| Mammalian cell entry related domain protein [Desulfobulbus
propionicus DSM 2032]
Length = 150
Score = 99.6 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG F+V + L G ++ ++ G+ + V+
Sbjct: 1 MTNARVELFVGFFLVVGFLALGWLALQLGEVPWLTGAKTYLLHAEFNNISGVKPGADVQI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ L L+++ ++ I + + + A++++QG+ G YI+++ E
Sbjct: 61 AGVTVGKVRQLHLNED--RQAVVTMQIDREVVVPVDSIASVKSQGIIGDKYIQITLGGDE 118
Query: 121 KKTIFQIATERNQ 133
A +
Sbjct: 119 TAYKPGEAIVDTE 131
>gi|218782262|ref|YP_002433580.1| Mammalian cell entry related domain protein [Desulfatibacillum
alkenivorans AK-01]
gi|218763646|gb|ACL06112.1| Mammalian cell entry related domain protein [Desulfatibacillum
alkenivorans AK-01]
Length = 148
Score = 99.6 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+FV+ L + + R + G +V R SV+GL T + V+
Sbjct: 1 MGKQSIELVVGVFVLVCLLCVAYLTVKVGRMDVLGGDTYQVSARF-QSVEGLKTGADVQI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + +D ++ + L T A++RT GL G YI+L+ +
Sbjct: 60 AGVGVGKVSNVIIDP-MDLVAVVTLQVDKGIELTEDTIASVRTAGLIGDKYIKLTPGGAD 118
Query: 121 KKTIFQIATERNQ 133
+ E +
Sbjct: 119 EVLQDGDQIEETE 131
>gi|153871246|ref|ZP_02000469.1| mce related protein [Beggiatoa sp. PS]
gi|152072291|gb|EDN69534.1| mce related protein [Beggiatoa sp. PS]
Length = 163
Score = 99.6 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 42/122 (34%), Gaps = 2/122 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ VG+FV +S I ++ GL S V+
Sbjct: 3 STRTIEIWVGIFVAIGFAALLMLSMKVSHLGDLFADKGYATIAKFDNIGGLKVKSPVKMA 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ + D + ++ I + ++ I T GL G YI L +E
Sbjct: 63 GVRIGRVAEIQFD-DSFYQAIVTMHIENQYSKIPTDSSVNIFTAGLLGEQYIGLEAGAEE 121
Query: 121 KK 122
Sbjct: 122 DY 123
>gi|82703860|ref|YP_413426.1| hypothetical protein Nmul_A2747 [Nitrosospira multiformis ATCC
25196]
gi|82411925|gb|ABB76034.1| Mammalian cell entry related protein [Nitrosospira multiformis ATCC
25196]
Length = 161
Score = 99.6 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV++ + + Y + + ++ GL + V+
Sbjct: 1 MQRATMDLWVGLFVMAGIGALLVLALKVGNLGTYSASDSYQVTGNFENIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + E + +L I T A+I T GL G YI L+
Sbjct: 61 AGVVVGRVTDIRFSTETYD-ALVIMNIDSRYKFPKDTFASILTSGLIGEQYIGLAAG 116
>gi|291044758|ref|ZP_06570467.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
gi|291011652|gb|EFE03648.1| conserved hypothetical protein [Neisseria gonorrhoeae DGI2]
Length = 178
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 15 MKKNILEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 74
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 75 SAGVLVGRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 131
>gi|207727755|ref|YP_002256149.1| abc-type transport system involved in resistance to organic
solvents, periplasmic component protein [Ralstonia
solanacearum MolK2]
gi|206590996|emb|CAQ56608.1| abc-type transport system involved in resistance to organic
solvents, periplasmic component protein [Ralstonia
solanacearum MolK2]
Length = 333
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 102/298 (34%), Gaps = 6/298 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + GLF + + F ++ W +R + +V+GLS ++V++
Sbjct: 1 MENRAHAFLAGLFTIGLAIFVALAVVWFNRDQTV---RVPYDVVTRSTVNGLSPQAAVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRK 119
G+ VG++ + D + P + + L+ D P+ +T + QG+ G+ Y++
Sbjct: 58 RGLDVGKVDTIRFDDKVPGQIIVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYD 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
K + + + ++ + + + ++
Sbjct: 118 SGKRAGNPTRLETSDRRPARIAMEAGFLDELDKRGDQMLTRLDQTLGSLATMLDDEHRQA 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ ++ + + + + T L SL +
Sbjct: 178 LMAAVHAFQGTMDSYGALARQAEPAMRKLPQIADNLDATLAATRRLSQSLSDPKGPLMGT 237
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + S + + T+ + + ++ + DH ++DF+S+ +S
Sbjct: 238 LASAGSDLSSASQSMQAATQALTYETLPQLNGVAREARQAVRSFDHAVTDFNSRPQSV 295
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 2/133 (1%)
Query: 314 SISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKD 371
+ + T+++ + + +K ++ ++ A + SL
Sbjct: 171 DDEHRQALMAAVHAFQGTMDSYGALARQAEPAMRKLPQIADNLDATLAATRRLSQSLSDP 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
M T ++ S+ Q + L + + R+ ++ V FD + +F
Sbjct: 231 KGPLMGTLASAGSDLSSASQSMQAATQALTYETLPQLNGVAREARQAVRSFDHAVTDFNS 290
Query: 432 NPQDIVWGREKGS 444
PQ +++G +
Sbjct: 291 RPQSVLFGPAPAT 303
>gi|270263238|ref|ZP_06191508.1| hypothetical protein SOD_d02550 [Serratia odorifera 4Rx13]
gi|270042926|gb|EFA16020.1| hypothetical protein SOD_d02550 [Serratia odorifera 4Rx13]
Length = 183
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L F ++ I ++ GL S V+
Sbjct: 1 MQTKKSEIWVGAFMLIALCAIVFLCLQVANIKSIGNEPTYRIYATFDNIGGLKARSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADISLDPKTYTP-RVALDIQDKFNQIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ I + + +
Sbjct: 120 DPDMGTTILKDGGTIQDTKSAMVLED 145
>gi|166713441|ref|ZP_02244648.1| hypothetical protein Xoryp_18880 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 308
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 108/304 (35%), Gaps = 11/304 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ +++ +I TPS + A R Q + + ++ T+
Sbjct: 120 APAL--TTIDKSDAPIIQTTPSALQNITDTAN------RIVERMDQMLSDKNVASISATL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
N+E IS +A+ + ++ + + + T TI L +L + + I +
Sbjct: 172 QNLEKISGGIADRDDGVQALIISARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKL 231
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+++ + N + + ++ L+ D + +
Sbjct: 232 DATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNN 291
Query: 299 AFLE 302
Sbjct: 292 PARY 295
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 70/200 (35%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + Q + ++ + ++ + +N+A ++ +
Sbjct: 112 QLSGGTPEAPALTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D+ + + I + + NL+ + + +++ +++ + +
Sbjct: 172 QNLEKISGGIADRDDGVQALIISARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILEK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDTP--KEFEPK 308
>gi|21230108|ref|NP_636025.1| hypothetical protein XCC0633 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769901|ref|YP_244663.1| hypothetical protein XC_3601 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21111636|gb|AAM39949.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575233|gb|AAY50643.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 308
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 98/297 (32%), Gaps = 13/297 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI-------- 172
++ +++ +I TPS + A +++
Sbjct: 120 APSL--TTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASITATLQNLEKI 177
Query: 173 --EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+S A + + I + + +
Sbjct: 178 SGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVK 237
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + N + EN ++ Q+ T+ ++R + + V K+D+ +
Sbjct: 238 LDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPAR 294
Score = 73.0 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 72/200 (36%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + + Q + ++ + ++ + +N+A T+ +
Sbjct: 112 QLSGGTPEAPSLTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASITATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D+ + + + I + + NL+ + + +++ +++ + +
Sbjct: 172 QNLEKISGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILEK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|118578999|ref|YP_900249.1| hypothetical protein Ppro_0560 [Pelobacter propionicus DSM 2379]
gi|118501709|gb|ABK98191.1| Mammalian cell entry related domain protein [Pelobacter propionicus
DSM 2379]
Length = 148
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VG+F++ + + L + G + SV GL +S+ G+ VG++
Sbjct: 8 VGVFMIVGILCLGYISIKLGKMEIMGGDYYTISAGF-DSVSGLKPGASIEVAGVEVGKVE 66
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ LD + + +LA I+ + A++RT G+ G +I+L +
Sbjct: 67 RIALDPKSNDRALAYMKIKSGVKITDDVIASVRTSGIIGDKFIKLKPGGSDTY 119
>gi|78049253|ref|YP_365428.1| ABC transporter substrate-binding protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|325928562|ref|ZP_08189750.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas perforans
91-118]
gi|78037683|emb|CAJ25428.1| ABC transporter substrate-binding protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|325541101|gb|EGD12655.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas perforans
91-118]
Length = 308
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 99/297 (33%), Gaps = 13/297 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI-------- 172
+ + +++ +I TPS + A +++ +
Sbjct: 120 APAL--TSIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATLQNLEKI 177
Query: 173 --EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+S A + + I + + +
Sbjct: 178 SGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVK 237
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + N + EN ++ Q+ T+ ++R + + V K+D+ +
Sbjct: 238 LDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPAR 294
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 71/200 (35%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + Q + ++ + ++ + +N+A ++ +
Sbjct: 112 QLSGGTPEAPALTSIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D+ + + + I + + NL+ + + +++ +++ + +
Sbjct: 172 QNLEKISGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILEK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|242277697|ref|YP_002989826.1| mammalian cell entry related domain protein [Desulfovibrio
salexigens DSM 2638]
gi|242120591|gb|ACS78287.1| Mammalian cell entry related domain protein [Desulfovibrio
salexigens DSM 2638]
Length = 148
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T+VG+FV L + L + + V V GL +S V
Sbjct: 1 MKKYPKETAVGIFVFIGLLCIVYMSIKLGDVHMFSDDHYHVTASF-NDVTGLRVNSPVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P+G + + LD E L + L A+++T GL G YI+++
Sbjct: 60 MGVPIGYVSKINLDIEKQKAVL-TLSLEKRIELTDDAIASVKTSGLIGDKYIKITPGGVG 118
Query: 121 KKTIFQIATERNQ 133
+
Sbjct: 119 DPIEPGGVIIETE 131
>gi|21244297|ref|NP_643879.1| hypothetical protein XAC3572 [Xanthomonas axonopodis pv. citri str.
306]
gi|294624129|ref|ZP_06702867.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294663968|ref|ZP_06729388.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|21109947|gb|AAM38415.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
gi|292601574|gb|EFF45573.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292606263|gb|EFF49494.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 308
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 98/297 (32%), Gaps = 13/297 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI-------- 172
+ +++ +I TPS + A +++ +
Sbjct: 120 APAL--TTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATLQNLEKI 177
Query: 173 --EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+S A + + I + + +
Sbjct: 178 SGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVK 237
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + N + EN ++ Q+ T+ ++R + + V K+D+ +
Sbjct: 238 LDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPAR 294
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 71/200 (35%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + Q + ++ + ++ + +N+A ++ +
Sbjct: 112 QLSGGTPEAPALTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASISATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D+ + + + I + + NL+ + + +++ +++ + +
Sbjct: 172 QNLEKISGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILEK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|17545034|ref|NP_518436.1| signal peptide protein [Ralstonia solanacearum GMI1000]
gi|17427324|emb|CAD13843.1| probable abc-type transport system involved in resistance to
organic solvents, periplasmic component abc transporter
protein [Ralstonia solanacearum GMI1000]
Length = 330
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + GLF + + F ++ W +R + +V+GLS ++V++
Sbjct: 1 MENRAHAFLAGLFTIGLAIFIALAVVWFNRDQTV---RVPYEVVTRSTVNGLSPQAAVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
G+ VG++ + D P + + L+ D P+ +T + QG+ G+ Y++
Sbjct: 58 RGLDVGKVDSIRFDDRVPGQIIVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQ 110
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 24/174 (13%), Positives = 57/174 (32%), Gaps = 12/174 (6%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
E+ ++ D +L+ + S E+ + M+S + ++
Sbjct: 142 AGFLDELDKRGDQMLARIDQTLSSLSALFDDEHRQALMAAMQSFQGTMDSYNALARQAEP 201
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
T+ + I NL+ + L +++ M T ++
Sbjct: 202 TMRRLPQIADNLDATLSATRRLSQSLSDPKG------------PLMGTLASAGNDLSSAS 249
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
S+ + L + R+ ++ V FD + +F PQ +++G +
Sbjct: 250 QSMQAATNVLANETLPQLNGFAREARQAVRSFDHAVTDFNTRPQSVLFGPAPAT 303
>gi|149374948|ref|ZP_01892721.1| hypothetical protein MDG893_07820 [Marinobacter algicola DG893]
gi|149360837|gb|EDM49288.1| hypothetical protein MDG893_07820 [Marinobacter algicola DG893]
Length = 312
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/302 (16%), Positives = 106/302 (35%), Gaps = 6/302 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + ++ +GLF + L + WL ++ D A I V GLS S V++
Sbjct: 1 MEPRAHHVLIGLFTLVALAGALAFALWLGQAGN-DRDYAWYEIIFDRGVSGLSEGSPVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + L LD P + A + D P+ T A + + G +EL
Sbjct: 60 SGIEVGDVAELSLDPSDPRNVRALIRVYDDVPIKEDTRAGLALTNITGSMNVELKGGTPG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI--IENIEKPLTT 178
+ + R I A PS ++++E K+ + + EN +
Sbjct: 120 SRKL---TGSRESPPTIQAEPSAFTTLMASSEELFAKLDQFLSNANAMVSEENSRNLTRS 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
S ++ + + Q++ + + TF + +L +
Sbjct: 177 LKNIEAVSSGLMDQRSELSNLVTSFDQLSVQTEATLETFRRFGNTANNLLDKEGRQLMTT 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+++++ ++ + + ++ + +++ L + S + E
Sbjct: 237 AQSAMDSLETATARLEALTARNEGSLDQGMQGIGELAPAMRELRSTLKNLDSLIHRLEDD 296
Query: 299 AF 300
Sbjct: 297 PT 298
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 78/190 (41%), Gaps = 4/190 (2%)
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
+ ++ F + + L + + + EN + T ++++ +
Sbjct: 127 RESPPTIQAEPSAFTTLMASSEELFAKLDQFLSNANAMVSEENSRNLTRSLKNIEAVSSG 186
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFR 380
+ DQR ++ + + + + ++ + + F + NN+ KE L AQ AM +
Sbjct: 187 LMDQRSELSNLVTSFDQLSVQTEATLETFRRFGNTANNLL-DKEGRQLMTTAQSAMDSLE 245
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ ++ +L G+ ++ +R+L+ T+ + D ++ E +P ++ GR
Sbjct: 246 TATARLEALTARNEGSLDQ-GMQGIGELAPAMRELRSTLKNLDSLIHRLEDDPTGLLLGR 304
Query: 441 EKGSVKIYKP 450
E ++ + P
Sbjct: 305 E--PIQEFNP 312
>gi|313669180|ref|YP_004049464.1| outer membrane transport protein [Neisseria lactamica ST-640]
gi|313006642|emb|CBN88108.1| putative outer membrane transport protein [Neisseria lactamica
020-06]
Length = 165
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 1 MKKNILEFWVGLFVLLGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QAKVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|238793702|ref|ZP_04637324.1| hypothetical protein yinte0001_790 [Yersinia intermedia ATCC 29909]
gi|238726943|gb|EEQ18475.1| hypothetical protein yinte0001_790 [Yersinia intermedia ATCC 29909]
Length = 189
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLF++ + F ++ I +V GL T+S V+
Sbjct: 1 MQTKKSEVWVGLFILIAILAVVFLCLKVADIKSVGNQPTYRIYATFDNVGGLKTNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVADITLDTKNYSP-RVAIDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERN 132
+ I +
Sbjct: 120 DPDMGTSILKDGG 132
>gi|309378879|emb|CBX22466.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 165
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + ++ + G + G + GL ++ V+
Sbjct: 1 MKKNVLEFWVGLFVLIGAAAVAFLAFRVAGGAAFGGSDKTYAVYADFGDIGGLKVNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVGAIGLDPKSY-QAKVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|315453382|ref|YP_004073652.1| ABC transport system periplasmic substrate-binding protein
[Helicobacter felis ATCC 49179]
gi|315132434|emb|CBY83062.1| putative possible ABC transport system periplasmic
substrate-binding protein [Helicobacter felis ATCC
49179]
Length = 277
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 51/129 (39%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G ++ + I WL N + ++ + G+ ++ + +
Sbjct: 1 MERHVNYTLIGGIFLACMACMVIFILWLGHVNFEEEDYMRYVVYTDKDLGGVGANTPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG I + D ++ I+ P+ T + +QGL G+ Y+ L R +
Sbjct: 61 KGIQVGTIKSVGFDPKHLGVVKLAIDIKSKVPVSKDATLKVASQGLVGLKYLSLIQGRSK 120
Query: 121 KKTIFQIAT 129
+ +
Sbjct: 121 EFYTKKDPE 129
Score = 40.3 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFR 380
+ I + I +++ ++Q + + ++ + + +
Sbjct: 158 KNIDKMLSPENIANLSKIIASVQQATQGLDTIKNNLDALLVKAD--RALSKGDTLLQHGN 215
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++ + +L++ L + +R + + V ++ F+ NP ++G
Sbjct: 216 QLITDVDKKVQGGQYDLKSMLTPLLIQAELSLRNIDQFVQKGSLLMDKFDANPYKTLFGE 275
Query: 441 EK 442
+K
Sbjct: 276 QK 277
>gi|188993116|ref|YP_001905126.1| conserved putative secreted protein [Xanthomonas campestris pv.
campestris str. B100]
gi|167734876|emb|CAP53088.1| conserved putative secreted protein [Xanthomonas campestris pv.
campestris]
Length = 308
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 98/297 (32%), Gaps = 13/297 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI-------- 172
++ +++ +I TPS + A +++
Sbjct: 120 APSL--TTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASITATLQNLEKI 177
Query: 173 --EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+S A + + I + + +
Sbjct: 178 SGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILEKLDATLVK 237
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + N + EN ++ Q+ T+ ++R + + V K+D+ +
Sbjct: 238 LDSAAGNADNILGENRTAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPAR 294
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 72/200 (36%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + + Q + ++ + ++ + +N+A T+ +
Sbjct: 112 QLSGGTPEAPSLTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASITATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D+ + + + I + + NL+ + + +++ +++ + +
Sbjct: 172 QNLEKISGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILEK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRTAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|330818438|ref|YP_004362143.1| Mce related protein [Burkholderia gladioli BSR3]
gi|327370831|gb|AEA62187.1| Mce related protein [Burkholderia gladioli BSR3]
Length = 315
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/290 (13%), Positives = 101/290 (34%), Gaps = 6/290 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + +L +++W + + +V GL D++VR+
Sbjct: 1 MENKSHAFWAGLFAIGLLLAIIAAVFWFNVDRTV---RIPYDLVARTNVTGLFPDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L ++
Sbjct: 58 RGLDVGKVATIHFDRAHPGEISIRILVDKDAPITRSTYGSLGFQGVTGIAFVQLDDTGRD 117
Query: 121 KKTIFQIATERNQRA-MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + Q + + S + + + K +
Sbjct: 118 PSPLPTSMKDVAQIPLHPSLFDQLQQRGDVLLKQMEVAASSVNAMLSPEMREQLKATAAS 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + L ++ + + T + + + + + ++
Sbjct: 178 VQQAADGVSTLTRSLEPVTAQLPETTRRVNQALASADAMLAPHGPLAANLDRAGKAAEQA 237
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
L + + + S T+ + + + + + + + S
Sbjct: 238 GTALTQMDQTLSELNASVR--YETLPRINSLSSNLGDTSRTVRDVAGEIS 285
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 61/163 (37%), Gaps = 4/163 (2%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D L +K E +A N S + + + + ++E +T+
Sbjct: 139 DQLQQRGDVLLKQMEVAASSVNAMLSPEMREQLKATAASVQQAADGVSTLTRSLEPVTAQ 198
Query: 342 LNDSSQKFAELMSKINNISALKENNSL-FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
L +++++ + ++ + + A + A +A ++++ + + +++
Sbjct: 199 LPETTRRVNQALASADAMLAPHGPLAANLDRAGKAAEQAGTALTQMDQTLSELNASVR-- 256
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
L I +L L +T D RNP+ +++G G
Sbjct: 257 -YETLPRINSLSSNLGDTSRTVRDVAGEISRNPRSLLFGTSAG 298
>gi|114321370|ref|YP_743053.1| hypothetical protein Mlg_2221 [Alkalilimnicola ehrlichii MLHE-1]
gi|114227764|gb|ABI57563.1| Mammalian cell entry related domain protein [Alkalilimnicola
ehrlichii MLHE-1]
Length = 153
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 47/122 (38%), Gaps = 2/122 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ VG+FV L F +S ++ + + +V GL + V
Sbjct: 3 STRTMELWVGVFVALGLGAMFLLALEVSGLAEFRDRPSYEVTAHFDNVGGLREKAPVNMA 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD + + + + +TA I T GL G Y+ L +E
Sbjct: 63 GVRVGQVKAIELDAQSYR-ARVVLGLDSRFDRIPADSTAAIYTSGLLGEQYVSLDPGWEE 121
Query: 121 KK 122
Sbjct: 122 DY 123
>gi|37527884|ref|NP_931229.1| hypothetical protein plu4032 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36787320|emb|CAE16404.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 168
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 61/145 (42%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG FV+ L F ++ + ++ GL S V+
Sbjct: 1 MQSKKSEIWVGFFVLIALAAIVFLCLKVADIKSVGNQPTYRLYATFDNIGGLKVRSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ + LD++ +A +++ + +++ +IRT GL G YI L+ ++
Sbjct: 61 GGVVIGRVASISLDEKTYTPQVALDIMKQYDRIPDTSSLSIRTSGLLGEQYIALNIGFED 120
Query: 121 KKTIFQIATERNQRAMITATPSGIN 145
+I E ++ + +
Sbjct: 121 PDMDTRILKEGDRVQDTKSAMVLED 145
>gi|294634665|ref|ZP_06713198.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Edwardsiella tarda ATCC 23685]
gi|291091911|gb|EFE24472.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Edwardsiella tarda ATCC 23685]
Length = 178
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLF++ L + F ++ + +V GL S V+
Sbjct: 1 MQTKKTEIWVGLFMLIALCAAVFLCLQVANVKSLGNEPTYRLYATFDNVGGLKARSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G ++ L+ +
Sbjct: 61 GGVVIGRVANISLDPQTY-LPKVAMDIDTRYNHIPDTSSLAIRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + +
Sbjct: 120 DPEMGTAILKDGGTIQDTKSAMVLED 145
>gi|148264679|ref|YP_001231385.1| hypothetical protein Gura_2635 [Geobacter uraniireducens Rf4]
gi|146398179|gb|ABQ26812.1| Mammalian cell entry related domain protein [Geobacter
uraniireducens Rf4]
Length = 328
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 48/147 (32%), Gaps = 21/147 (14%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K T++G FV+ + + L + ++ I GSV GL+ S V F
Sbjct: 1 MSTKVNKTAIGAFVLGAIALFVAGVLVLG-AGKFFTKEFVYITYFVGSVKGLNVGSPVMF 59
Query: 61 NGIPVGRIVGLF-----------------LDQEYPNHSLAKALIRP---DTPLYPSTTAT 100
G+ VG + + LD E + + P + A
Sbjct: 60 RGVKVGSVTDISIIVDPSKKELLIPVVFTLDPEKFRGAKVQFRQDPRYVKYAVDLGLRAQ 119
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQI 127
++TQ + +K +
Sbjct: 120 LQTQSFVTGQLMVALDFFPDKPANYVG 146
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/209 (10%), Positives = 72/209 (34%), Gaps = 6/209 (2%)
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + + +F + + +++ L + +
Sbjct: 121 QTQSFVTGQLMVALDFFPDKPANYVGLTKKYPEIPSIPTSLEQLQKTLENLPLEEIIDNL 180
Query: 298 SAFLENIADSTSNMRSSISAIREI---TDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
++ LE I S++ + + D + + + ++ + NL+++S +
Sbjct: 181 NSTLEEIDRVVSSIDAKKTTRTIEAAIRDVQALVKHVNDKVDPLVENLSETSVAARGAFT 240
Query: 355 KINNISALKENN--SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
+ ALKE + + + + +++ + + + + G + + +
Sbjct: 241 QAEKTLALKEGVPGDIAVSLRETLAKSSASFDQLRAALLTYEKLAERNADLGYS-VTKTL 299
Query: 413 RKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+L T + ER+P+ ++ G++
Sbjct: 300 TELDSTSRAIRSLADYLERHPESLIKGKQ 328
>gi|332178186|gb|AEE13875.1| Mammalian cell entry related domain protein [Thermodesulfobium
narugense DSM 14796]
Length = 422
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME K VG+FV++ L SI W + + PM ++ P V GLS D+ V +
Sbjct: 1 ME-KGRAAKVGIFVLATLILLAGSILWF--QSDFLKPMYRIVAYFPD-VSGLSVDAPVYY 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G+ VGRI + LI D + + +I T GL G +
Sbjct: 57 MGVKVGRIKSIT--PTLYKGVETVILINKDVLIPKGSYFSIGTYGLVGDKF 105
>gi|325915746|ref|ZP_08178048.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas vesicatoria
ATCC 35937]
gi|325538010|gb|EGD09704.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas vesicatoria
ATCC 35937]
Length = 308
Score = 99.2 bits (244), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/297 (17%), Positives = 100/297 (33%), Gaps = 13/297 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GLS S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLSVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI-------- 172
++ +++ +I TPS + A +++ + +
Sbjct: 120 APSL--TTIDKSDAPIIQTTPSALQNITDTANRIVERMDEMLSDKNVASISATLQNLEKI 177
Query: 173 --EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+S A + + I + + +
Sbjct: 178 SGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILNKLDATLVK 237
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + N + EN ++ Q+ T+ ++R + + V K+D+ +
Sbjct: 238 LDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPAR 294
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/200 (9%), Positives = 71/200 (35%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + + Q + ++ + ++ + +N+A ++ +
Sbjct: 112 QLSGGTPEAPSLTTIDKSDAPIIQTTPSALQNITDTANRIVERMDEMLSDKNVASISATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D+ + + + I + + NL+ + + +++ +++ +
Sbjct: 172 QNLEKISGGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILNK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|307129072|ref|YP_003881088.1| putative ABC-type organic solvent transporter [Dickeya dadantii
3937]
gi|306526601|gb|ADM96531.1| predicted ABC-type organic solvent transporter [Dickeya dadantii
3937]
Length = 207
Score = 98.9 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + VG+F++ L F ++ + ++ GL S V+
Sbjct: 1 MQTKKHEIWVGVFMLIALCAIVFLCLKVADLKSLGQQQTYRLYATFDNIGGLKARSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADISLDTKTY-LPRVAIDIDKRYDHIPDTSSLAIRTSGLLGEQYLALNMGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
++ I + + +
Sbjct: 120 DEDMGTSILKDGGTIQDTKSAMVLED 145
>gi|255067844|ref|ZP_05319699.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria sicca ATCC 29256]
gi|255047935|gb|EET43399.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria sicca ATCC 29256]
Length = 165
Score = 98.9 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSV 58
M+ VGLFV+ + F + ++ + G V + GL ++ +
Sbjct: 1 MKKNVLEFWVGLFVLLGVAAVGFLAFRVAGGAAFGNSGKTYTVYADFSD-IGGLKANAPI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 60 KSAGVLVGRVGSIELDPKSY-QAKVRLDLDSKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|157372591|ref|YP_001480580.1| hypothetical protein Spro_4358 [Serratia proteamaculans 568]
gi|157324355|gb|ABV43452.1| Mammalian cell entry related domain protein [Serratia
proteamaculans 568]
Length = 183
Score = 98.9 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L F ++ I ++ GL S V+
Sbjct: 1 MQTKKSEIWVGAFMLIALCAVVFLCLQVANIKSIGNEPTYRIYATFDNIGGLKARSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVANISLDPKTYTP-RVALDIQDKFNQIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ I + + +
Sbjct: 120 DPDMGTTILKDGGTIQDTKSAMVLED 145
>gi|170703964|ref|ZP_02894626.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
IOP40-10]
gi|170131127|gb|EDS99792.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
IOP40-10]
Length = 311
Score = 98.9 bits (243), Expect = 1e-18, Method: Composition-based stats.
Identities = 33/176 (18%), Positives = 76/176 (43%), Gaps = 6/176 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF +++ +++W + + +V GL D++VRF
Sbjct: 1 MENKSHAFWAGLFTIALTLAIAGTVFWFNVDRTV---RVPYDLLARTNVTGLFPDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + L+ D P+ ST ++ QG+ GI +++L
Sbjct: 58 RGLDVGKVQLIGFDRTHPGQIRIRILVDRDAPITQSTYGSLGFQGVTGIAFVQL---EDT 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + A I PS + + +++ ++ ++ +
Sbjct: 115 GRDLAPLPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLEQAAESANALMSPEMREQ 170
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 17/168 (10%), Positives = 46/168 (27%), Gaps = 2/168 (1%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ + +I S F + + A ++N S ++ + +
Sbjct: 121 LPSSPKAIAQIPMRPSLFDQIQERGDVLLRQLEQAAESANALMSPEMREQLRATAESLQH 180
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ ++ L + + M ++N A L + + +
Sbjct: 181 AADGAATLSKQLAPAVAALPQTMHEVNRTMASANT--LLQPNGPLVSNLNKAGSAAEQVG 238
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ + L L + + D RNP +++
Sbjct: 239 VALNDLNARVQYDTLPRFNALAGSVGDASRQLKDVAGELGRNPSSLLF 286
>gi|300705333|ref|YP_003746936.1| ABC transporter periplasmic component [Ralstonia solanacearum
CFBP2957]
gi|299072997|emb|CBJ44354.1| putative ABC-type transporter, periplasmic component (resistance to
organic solvents) [Ralstonia solanacearum CFBP2957]
Length = 327
Score = 98.9 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/298 (13%), Positives = 102/298 (34%), Gaps = 6/298 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + GLF + + F ++ W +R + +V+GLS ++V++
Sbjct: 1 MENRAHAFLAGLFTIGLAIFIALAVVWFNRDQTV---RVPYDVVTRSTVNGLSPQAAVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRK 119
G+ VG++ + D + P + + L+ D P+ +T + QG+ G+ Y++
Sbjct: 58 RGLDVGKVDTIRFDDKVPGQIIVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGYD 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
K + + + ++ + + + ++
Sbjct: 118 SSKRAANPTRLETSDRRPARIAMEAGFLDELDKRGDQMLTKLDQTLGSLAAMLDDEHRQA 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ ++ + + + + T L SL +
Sbjct: 178 LMAAVRSFQGTMDSYGALARQAEPAMRKLPQIADNLDATLAATRRLSQSLSDPKGPLMGT 237
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + S + + T+ + + ++ + DH ++DF+S+ +S
Sbjct: 238 LASAGSDLSSASQSMQAATQALTYETLPQLNGVAREARQAVRSFDHAVTDFNSRPQSV 295
Score = 49.9 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 46/128 (35%), Gaps = 2/128 (1%)
Query: 314 SISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKD 371
+ + + T+++ + + +K ++ ++ A + SL
Sbjct: 171 DDEHRQALMAAVRSFQGTMDSYGALARQAEPAMRKLPQIADNLDATLAATRRLSQSLSDP 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
M T ++ S+ Q + L + + R+ ++ V FD + +F
Sbjct: 231 KGPLMGTLASAGSDLSSASQSMQAATQALTYETLPQLNGVAREARQAVRSFDHAVTDFNS 290
Query: 432 NPQDIVWG 439
PQ +++G
Sbjct: 291 RPQSVLFG 298
>gi|325923306|ref|ZP_08184979.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas gardneri
ATCC 19865]
gi|325546233|gb|EGD17414.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas gardneri
ATCC 19865]
Length = 308
Score = 98.9 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 56/304 (18%), Positives = 110/304 (36%), Gaps = 11/304 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y +G F + W ++ + D + + +V GL+ S V++
Sbjct: 1 METKANYVLIGAFTIVAGLALLLFGLWAAKYSS-DRTWQQYRVVFREAVTGLTVGSPVQY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG I L L P +A + TP+ T A + L G + I+LS E
Sbjct: 60 NGIAVGSITELTLAPNDPRQVVAHVRVNSTTPIKSDTRAKLAITSLTGPSIIQLSGGTPE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ +++ +I TPS + A R Q + + +T T+
Sbjct: 120 APSL--TTIDKSDAPIIQTTPSALQNITDTAN------RIVERMDQMLSDKNVASITATL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
N+E IS+ +A+ + ++ + + + T TI L +L + + I +
Sbjct: 172 QNLEKISSGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNLVQQLPGILAKL 231
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+++ + N + + ++ L+ D + +
Sbjct: 232 DATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNN 291
Query: 299 AFLE 302
Sbjct: 292 PARY 295
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/200 (10%), Positives = 71/200 (35%), Gaps = 3/200 (1%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + + Q + ++ + ++ + +N+A T+ +
Sbjct: 112 QLSGGTPEAPSLTTIDKSDAPIIQTTPSALQNITDTANRIVERMDQMLSDKNVASITATL 171
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ I D+ + + + I + + NL+ + + +++ +++ +
Sbjct: 172 QNLEKISSGIADRDEGMQALIVSARDAARNLDTTLTTTNGTIKRLDQNL-VQQLPGILAK 230
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + + + +F+ GL + + +L+ + + +
Sbjct: 231 LDATLVKLDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDN 290
Query: 432 NPQDIVWGREKGSVKIYKPK 451
NP + GR+ K ++PK
Sbjct: 291 NPARYLLGRDAP--KEFEPK 308
>gi|208435332|ref|YP_002266998.1| ABC transport system substrate binding protein [Helicobacter pylori
G27]
gi|208433261|gb|ACI28132.1| ABC transport system substrate binding protein [Helicobacter pylori
G27]
Length = 267
Score = 98.9 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/236 (12%), Positives = 83/236 (35%), Gaps = 4/236 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
YT +G L I WL DG E ++ + G++T+S + + GI V
Sbjct: 2 NYTLIGGLFFLCLVCMVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPINYKGIQV 61
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G ++ + ++ +I+ + + + ++G G+ ++ L E+ F
Sbjct: 62 GNVIKVGFAKDKVGVVRLDLMIKSSVKIRKDSKVAVSSRGFMGLKFLALEQSHNEE---F 118
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ ++ +R ++ ++ +A +++ + R++ +I+++ I
Sbjct: 119 YGSGDKGER-ILIFKEGLMDRLSGDANQVVQEVMKAIRNVNRILDDENVEKFKHILASVD 177
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
++ ++ + S+ + + L +
Sbjct: 178 DLIANLDSRKTQFDLLISNANNLVSNVNNVALDVDKRLKQGQYDFKAMFTPLIMQA 233
>gi|77166236|ref|YP_344761.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Nitrosococcus oceani
ATCC 19707]
gi|76884550|gb|ABA59231.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Nitrosococcus oceani
ATCC 19707]
Length = 155
Score = 98.9 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 2/116 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ VGLFV + L F +S + ++ ++ GL S V G
Sbjct: 4 SRTVELVVGLFVAAGLVAFFMLAMRVSNLSLVAQENTYSVVAEFQNIGGLKVRSPVTLAG 63
Query: 63 IPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ +GR+V + +D + + D L T+A+I T GL G YI L
Sbjct: 64 VTIGRVVSIQIDPQTYGAQVRMHIEAQYDY-LPEDTSASIYTSGLLGEQYIALEPG 118
>gi|319638900|ref|ZP_07993658.1| hypothetical protein HMPREF0604_01282 [Neisseria mucosa C102]
gi|317399804|gb|EFV80467.1| hypothetical protein HMPREF0604_01282 [Neisseria mucosa C102]
Length = 164
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + + + + + GL T++ V+
Sbjct: 1 MKKNALEFWVGLFVLLGAAAIGFLAFRAAGGQSFGKSSQTYTVYADFSDIGGLKTNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVASIQLDPKSY-QAKVALNLDSQYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|156935717|ref|YP_001439633.1| hypothetical protein ESA_03586 [Cronobacter sakazakii ATCC BAA-894]
gi|156533971|gb|ABU78797.1| hypothetical protein ESA_03586 [Cronobacter sakazakii ATCC BAA-894]
Length = 183
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + VG F++ L + F ++ + ++ GL S VR
Sbjct: 1 MQTKKFEIWVGAFMLVALLAALFICLKVADVTSLRAEPTYRLYATFDNIGGLKPHSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVSDITLDPKTY-LPRVAMDIEQRYDHIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + +
Sbjct: 120 DPELGTTILKDGGTIQDTKSAMVLED 145
>gi|241661799|ref|YP_002980159.1| Mammalian cell entry related domain-containing protein [Ralstonia
pickettii 12D]
gi|240863826|gb|ACS61487.1| Mammalian cell entry related domain protein [Ralstonia pickettii
12D]
Length = 322
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/325 (13%), Positives = 110/325 (33%), Gaps = 6/325 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + GLF + + F ++ W +R + +V+GL+ +SV++
Sbjct: 1 MENKAHAFLAGLFTIGLAIFMGLAVMWFNRDQTV---RVPYEVVTRSTVNGLNPQASVKY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + P + + L+ D P+ +T + QG+ G+ Y++L +
Sbjct: 58 RGLDVGKVDSIRFDDKVPGQIVVRVLVDKDAPITTTTYGRLAYQGVTGLAYVQLDDRGFD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI---QKIIENIEKPLT 177
A F+ + ++ I+ + E
Sbjct: 118 NSQHAPSPVRLATSQKDPARIRMDAGFLDELDKRGDQMLSKLDQTLSSLSIMFDDEHRQQ 177
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T + T+ A + ++ + + +T L SL +
Sbjct: 178 VTASLQAFQKTMDAYSTLAQQAEPTMRRLPQIADNLDSTLVATRKLTQSLSDPKGPLMTT 237
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + ++ T+ + + ++ + DH ++DF+++ +S
Sbjct: 238 LSGAGTDLTAATQSMQSAANVLTYETLPQLNGFAREARQAVRGFDHAVTDFNARPQSVLF 297
Query: 298 SAFLENIADSTSNMRSSISAIREIT 322
+ + +
Sbjct: 298 GPAPGAPGPGETGFTAPAARASAQP 322
Score = 44.2 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 25/194 (12%), Positives = 58/194 (29%), Gaps = 8/194 (4%)
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + N+ S + T + ++D SK+ +S +
Sbjct: 112 DDRGFDNSQHAPSPVRLATSQKDPARIRMDAGFLDELDKRGDQMLSKLDQTLSSLSIMFD 171
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
+ + +S+ A ++ D + E L + + +
Sbjct: 172 DEHRQQVTASLQAFQKTMDAYSTLA---QQAEPTMRRLPQIADNLDSTLVATRKL----- 223
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
SL M T + S+ + + L + R+ ++ V FD
Sbjct: 224 TQSLSDPKGPLMTTLSGAGTDLTAATQSMQSAANVLTYETLPQLNGFAREARQAVRGFDH 283
Query: 425 CLNNFERNPQDIVW 438
+ +F PQ +++
Sbjct: 284 AVTDFNARPQSVLF 297
>gi|169631230|ref|YP_001704879.1| MCE-family protein [Mycobacterium abscessus ATCC 19977]
gi|169243197|emb|CAM64225.1| Hypothetical MCE-family protein [Mycobacterium abscessus]
Length = 344
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/308 (12%), Positives = 101/308 (32%), Gaps = 7/308 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + V +F V +L + I G + + L + VR
Sbjct: 1 MK-RATQIKVIVFTVVMLLVAAGLIITFGEFRFGSGKRYH---AMFSTASDLRSGQKVRI 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVGR+ + L+++ + LY S+ A IR + L G Y+E++ E
Sbjct: 57 AGVPVGRVKNVSLNRDNS--VEVTFDVDSKYQLYSSSRAIIRYENLVGDRYLEITAGPGE 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ T + + + + + I+ ++ T
Sbjct: 115 LHKLPDGGTLDKEHTQPALDLDALLGGLRPV-LKGFDAAKVNEISNAFIQILQGQGGTLS 173
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ S+ + + + ++ +T + + + Q+ +
Sbjct: 174 QLLGDTSSFTSGLAERDQLIGDVINHLNEVLATVDSKSTQFSSSVDQLQQLISGLAQQRD 233
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + ++ + +T ++ T + +++ ++D +D + +++ +
Sbjct: 234 VVAGALPPLASTASSLESVLKDTRPYIKGTIEQARQLATRVDERKADVNVVVENLAENYL 293
Query: 301 LENIADST 308
N +
Sbjct: 294 RLNALGAY 301
>gi|121592686|ref|YP_984582.1| hypothetical protein Ajs_0252 [Acidovorax sp. JS42]
gi|120604766|gb|ABM40506.1| Mammalian cell entry related domain protein [Acidovorax sp. JS42]
Length = 325
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FV+++ WL+R + SV GL ++VR+
Sbjct: 1 MENKSHALAAGIFVIAVAALLAGLGMWLTRDQ---TDYQLYELSSKDSVSGLQPQAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
G+ VG+++ + D + + L + + D P+ P+T AT+ QG+ G+ +++
Sbjct: 58 KGVAVGKVMHIGFDPQVSGNVLIRIAVNADAPISPTTFATLGYQGVTGLAHVQ 110
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/241 (12%), Positives = 60/241 (24%), Gaps = 12/241 (4%)
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
++ V + S TF T+ + ++ D + S
Sbjct: 77 NVLIRIAVNADAPISPTTFATLGYQGVTGLAHVQLDDAEAPLPAPPPGASGLPRLPLHSS 136
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
QE Q+I+ LL D + + S + R + +
Sbjct: 137 SFSQLAEQGPAILGQVQEATQRINTLLGDENQQRFSTALKQLGDAAGSIDQLARRLDNTV 196
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
D + + T + A + A R +
Sbjct: 197 TTRLDPALAGVPPLVQDTQQTLQALRQAGSSAATAAN------------DVSQAIRTLQA 244
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++I S+ F + L I + + + NPQ +++
Sbjct: 245 EGGALDEIAAGAKSLAGAADRFGRVTLPRINHAADETARAARRLGRTASGINDNPQSLIY 304
Query: 439 G 439
G
Sbjct: 305 G 305
>gi|300113020|ref|YP_003759595.1| mammalian cell entry related domain-containing protein
[Nitrosococcus watsonii C-113]
gi|299538957|gb|ADJ27274.1| Mammalian cell entry related domain protein [Nitrosococcus watsonii
C-113]
Length = 155
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 2/116 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ VGLFV + L F +S + ++ ++ GL S V G
Sbjct: 4 SRTVELIVGLFVAAGLAAFFMLAMRVSNLSLMAQKNTYSVVAEFQNIGGLKVRSPVTLAG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ +GR+V + +D + + K I L T+A+I T GL G YI L
Sbjct: 64 VTIGRVVSIQIDPQTYG-AQVKMHIEAQYNYLPEDTSASIYTSGLLGEQYIALEPG 118
>gi|239947171|ref|ZP_04698924.1| ABC transporter substrate binding protein [Rickettsia endosymbiont
of Ixodes scapularis]
gi|239921447|gb|EER21471.1| ABC transporter substrate binding protein [Rickettsia endosymbiont
of Ixodes scapularis]
Length = 149
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G FVV I+ F + + S+ +V S +G+ S V
Sbjct: 1 MKQNIIETIIG-FVVLIIALLFLIFAYKTGSSITSSKGYQVTANF-QSAEGIEVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+GI +G + + LD ++ I D + + A + T GL G YI +
Sbjct: 59 SGIKIGSVKKITLDPNSF-YASVYLNINDDVKIPKDSKAQVVTSGLLGGKYISIVPGND 116
>gi|238756122|ref|ZP_04617443.1| hypothetical protein yruck0001_2770 [Yersinia ruckeri ATCC 29473]
gi|238705661|gb|EEP98057.1| hypothetical protein yruck0001_2770 [Yersinia ruckeri ATCC 29473]
Length = 180
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLF+V L F ++ I +V GL S V+
Sbjct: 1 MQTKKTEVWVGLFIVIALAAIIFLCLKVADIKSVGNQPTYRIYATFDNVGGLKASSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I+ + +++ +RT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVAEISLDTKNYTP-RVAIDIQDQYNNIPDTSSLAVRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRA 135
+ + I E +
Sbjct: 120 DPEMGTSILKEGSTIQ 135
>gi|226364208|ref|YP_002781990.1| Mce family protein [Rhodococcus opacus B4]
gi|226242697|dbj|BAH53045.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 340
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 79/298 (26%), Gaps = 11/298 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + +F + S+ V GL VR
Sbjct: 1 MTVRATTVKLLIFATVMSVIFAGLALVFSQYRFSSSDGYHAT---FTDVSGLKPGDKVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + +D + + + L+ T AT+R + L G Y+EL
Sbjct: 58 AGVPVGAVEKVSIDDDN--LADVDFTVDTKYSLFDGTKATVRYENLVGDRYMELLEGAGS 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEK 174
+ + + + + + + + Q +
Sbjct: 116 VQPLPDGGSIPVENTSPALDLDLLLGGFKPLLRALDPQQVNDLSQALVQVFQGQGGTLVS 175
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
L +T + T++ I + D + + S +
Sbjct: 176 LLGSTSSFTNTLADRDQLIGEVITNLNQVLGTINDRGDQFRSTLDQLQQLVSGLSQDRDQ 235
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ +I + + + +T+ + T Q +D + +
Sbjct: 236 IGDAIPRIAGATGDLAGLLEGARPPLQSTIAEANRTATQLQAGEDDLDWVFQNLPDAY 293
>gi|67458574|ref|YP_246198.1| ABC transporter substrate binding protein [Rickettsia felis
URRWXCal2]
gi|67004107|gb|AAY61033.1| ABC transporter substrate binding protein [Rickettsia felis
URRWXCal2]
Length = 149
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G FVV I+ F + + S+ +V S +G++ S V
Sbjct: 1 MKQNIIETIIG-FVVLIIALLFLIFAYKTGSSIASSKGYQVTANF-QSAEGIAVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+GI +G + + LD ++ I D + + A + T GL G YI +
Sbjct: 59 SGIKIGSVKKITLDPNSF-YASVYLNINDDVKIPKDSKAQVVTSGLLGGKYISIVPGND 116
>gi|118594040|ref|ZP_01551387.1| Mammalian cell entry related protein [Methylophilales bacterium
HTCC2181]
gi|118439818|gb|EAV46445.1| Mammalian cell entry related protein [Methylophilales bacterium
HTCC2181]
Length = 153
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 44/120 (36%), Gaps = 1/120 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME VG+FV+ L F + + I ++ GL ++++
Sbjct: 1 MERTKLDIWVGIFVILGLAALFGLATKVGNLTSNNIKDTYTIYAHFENIGGLKPRAAIKA 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D E H++ + T A I T GL G YI L
Sbjct: 61 AGVVVGRVNSIIFDTEAY-HAVVSIDVDNRYIFPKDTFANIYTAGLLGEQYIGLEAGGDM 119
>gi|85058185|ref|YP_453887.1| hypothetical protein SG0207 [Sodalis glossinidius str. 'morsitans']
gi|84778705|dbj|BAE73482.1| conserved hypothetical protein [Sodalis glossinidius str.
'morsitans']
Length = 175
Score = 98.5 bits (242), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 50/133 (37%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L F ++ I ++ GL S VR
Sbjct: 1 MQTKKSEIWVGAFMIIALCAIVFLCLKVADIRSVSNAATYRISASFDNIGGLKVRSPVRV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G Y+ L+
Sbjct: 61 GGVVIGRVADITLDPKTYTP-KVTIDIEQTYNHIPDTSSLAIRTSGLLGEQYLALNIGFD 119
Query: 120 EKKTIFQIATERN 132
+ + I +
Sbjct: 120 DPEMGTSILKDGG 132
>gi|284008693|emb|CBA75355.1| conserved hypothetical protein [Arsenophonus nasoniae]
Length = 177
Score = 98.1 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VGLFV+ L F ++ + + +V GL +S V+
Sbjct: 1 MQSKKSEILVGLFVLIALAAIVFLCLKVADIKSFGNQPTYKVTASFTNVGGLKVNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGRIV + LD++ I + +++ +I T GL G ++ L+
Sbjct: 61 GGVVVGRIVDIMLDKKTYTP-RVTLAIFSQYDNIPDNSSLSILTAGLLGEQFLALNVGFY 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + + +
Sbjct: 120 DPDMGITFLKDGGRIEDTKPAIILED 145
>gi|315639124|ref|ZP_07894291.1| ABC superfamily ATP binding cassette transporter periplasmic
substrate-binding protein [Campylobacter upsaliensis
JV21]
gi|315480828|gb|EFU71465.1| ABC superfamily ATP binding cassette transporter periplasmic
substrate-binding protein [Campylobacter upsaliensis
JV21]
Length = 295
Score = 98.1 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K Y VG+F+ + F S + WL ++ + I SV GL + VR
Sbjct: 1 MENKASYFWVGIFIFGVFFVSLIFMLWLGGYSEEESFEYY-EIHTQESVAGLGLKAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + ++ +TP+ T AT++ QG+ G+ +I+L
Sbjct: 60 LGVEVGSVENISIYTKQNLGVNILIKVKKETPIKEDTFATLQLQGITGLKFIQLQGGSVN 119
Query: 121 KKTI 124
K +
Sbjct: 120 SKKL 123
>gi|198283901|ref|YP_002220222.1| Mammalian cell entry related domain-containing protein
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665999|ref|YP_002426535.1| mce-related protein [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248422|gb|ACH84015.1| Mammalian cell entry related domain protein [Acidithiobacillus
ferrooxidans ATCC 53993]
gi|218518212|gb|ACK78798.1| mce-related protein [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 312
Score = 98.1 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 69/193 (35%), Gaps = 3/193 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MES+ + +F+ + W+ + P + SV GL+ + VRF
Sbjct: 1 MESRAHALVALIFLAVLGIGMVVVGLWMHHRQR---PGVTFDVISRYSVAGLTLQAPVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + LD P + + TP+ +T A + QG+ G++Y+ L+
Sbjct: 58 KGVRVGEVTAIGLDPANPRMIRVRIKVDEATPVTRATFAELAPQGVTGLSYLSLTDHGTN 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ + + M + ++ + N ++ + T
Sbjct: 118 FAPLPRVDSRPAEIPMHPSFWEVLSRNGESLVNRGNVLASRMNMLLNSQNRARFGQTLIH 177
Query: 181 ANIETISTVLANN 193
+ T V
Sbjct: 178 LDQATDHLVQMEM 190
>gi|261378130|ref|ZP_05982703.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria cinerea ATCC 14685]
gi|269145590|gb|EEZ72008.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria cinerea ATCC 14685]
Length = 165
Score = 98.1 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSV 58
M+ VGLFV+ + F + ++ + G V + GL ++ +
Sbjct: 1 MKKNVLEFWVGLFVLLGVAAVGFLAFRVAGGAAFGNSGKTYTVYADFSD-IGGLKANAPI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 60 KSAGVLVGRVGSIELDPKSY-QAKVRLDLDSKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|254670841|emb|CBA07274.1| mce related protein [Neisseria meningitidis alpha153]
gi|308814917|dbj|BAJ22981.1| a component of GltT L-glutamate ABC transporter [Neisseria
meningitidis]
gi|325127427|gb|EGC50358.1| mce family protein [Neisseria meningitidis N1568]
Length = 164
Score = 98.1 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSV 58
M+ VGLFV+ + F + ++ + G V + GL ++ +
Sbjct: 1 MKKNILEFWVGLFVLLGVAAVGFLAFRVAGGAAFGNSGKTYTVYADFSD-IGGLKANAPI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 60 KSAGVLVGRVGSIELDPKSY-QAKVRLDLDSKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|157964867|ref|YP_001499691.1| ABC transporter substrate binding protein [Rickettsia massiliae
MTU5]
gi|157844643|gb|ABV85144.1| ABC transporter substrate binding protein [Rickettsia massiliae
MTU5]
Length = 149
Score = 98.1 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G FVV I+ F + + S+ +V S +G+ S V
Sbjct: 1 MQQNIIETIIG-FVVLIIALLFLIFAYKTGSSITSSKGYQVTAHF-QSAEGIVVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+GI +G + + LD ++ I D + + A + T GL G YI +
Sbjct: 59 SGIKIGSVKKITLDPNSF-YASVYLNINDDVKIPKDSKAQVVTSGLLGGKYISIVPGND 116
>gi|291279511|ref|YP_003496346.1| ABC transporter substrate-binding protein [Deferribacter
desulfuricans SSM1]
gi|290754213|dbj|BAI80590.1| ABC transporter, substrate-binding protein [Deferribacter
desulfuricans SSM1]
Length = 526
Score = 98.1 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 54/311 (17%), Positives = 100/311 (32%), Gaps = 4/311 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG+FVV L + + E+I + GL DS V++ G+ VG
Sbjct: 6 EAKVGIFVVIGLLLLGYMTTKVEDLKLGKSDGYEIIAYL-NDASGLVKDSYVKYRGVEVG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + L + H LI L + A +R+ G G Y+EL T+ KE +
Sbjct: 65 KVKDIRLKEN---HVEVVLLIDKQYKLPSNVAAIVRSSGFLGEKYLELQTVGKETEGYLT 121
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+E N F A++ + I + +T T
Sbjct: 122 TGSEIKNYKSSADFDELQNKFSEIADDIKAITASLKEVIASDNGKADMKMTLQNIRYSTE 181
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + ++ KN + + L +K + NQ +
Sbjct: 182 YIRQMLEENQKRINQIVKNIEAITASIKNVTEANQENVNQLITNLKEVSETLKNQTPQIA 241
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ +N D V N+ D+RET + V K++ + + +
Sbjct: 242 KKINNITTNIDDLVGNSKGDLRETISNIKVVTAKLEKTVDNLNDITDKINKGKGTVGTLI 301
Query: 307 STSNMRSSISA 317
+ + +
Sbjct: 302 NDNETAKDVKD 312
>gi|118473663|ref|YP_890125.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118174950|gb|ABK75846.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 344
Score = 98.1 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/308 (12%), Positives = 91/308 (29%), Gaps = 6/308 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG+F + +L + + G L VR
Sbjct: 1 MHRDRTMLKVGIFTMVMLLVAAGLVVVFGEFRFAAGQSYHAT---FSEASRLKAGQDVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + L+ + + LY S+ A +R + L G Y+E+++ E
Sbjct: 58 AGVPVGTVKSVKLNPDNT--VDVGFDVNKRYQLYTSSRAVVRYENLVGDRYLEITSGPGE 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T Q + + + +IE ++
Sbjct: 116 LRKLAPGGTLGLQNTQPALDLDALLGGLRPVLKGLDGAKINEV-SNAVIEMLQGQGGALA 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + S N + + + + D + + + +
Sbjct: 175 NMLTSTSAFTQNLAARDQLISDVIANLNTVLGTVDEKGAQFDASVDQLQQLITGLAENKD 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I I+ ++ ++ + + V+ + + + ++D D + ++ +
Sbjct: 235 PIAGAIEPLASAESDLTEMLEKSRRPVQGVIENVRPMAGRMDERKDDINKVIEPLAENYL 294
Query: 301 LENIADST 308
N +
Sbjct: 295 RLNALGAY 302
>gi|225077105|ref|ZP_03720304.1| hypothetical protein NEIFLAOT_02158 [Neisseria flavescens
NRL30031/H210]
gi|241758966|ref|ZP_04757078.1| outer membrane transport protein [Neisseria flavescens SK114]
gi|224951662|gb|EEG32871.1| hypothetical protein NEIFLAOT_02158 [Neisseria flavescens
NRL30031/H210]
gi|241320787|gb|EER57020.1| outer membrane transport protein [Neisseria flavescens SK114]
Length = 164
Score = 98.1 bits (241), Expect = 3e-18, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVR 59
M+ VGLFV+ F + + + + + GL T++ V+
Sbjct: 1 MKKNALEFWVGLFVLLGAAAIGFLAFRAAGGQSFGKSSQTYTVYADFSDIGGLKTNAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + + +A I T GL G YI L
Sbjct: 61 SAGVLVGRVASIQLDPKSY-QAKVALNLDSQYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|149907974|ref|ZP_01896642.1| hypothetical protein PE36_19940 [Moritella sp. PE36]
gi|149808980|gb|EDM68911.1| hypothetical protein PE36_19940 [Moritella sp. PE36]
Length = 149
Score = 97.7 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + TSVG+FV+ + + L + V S GL ++V
Sbjct: 1 MKKSSIETSVGIFVLIGILCVGYLTIKLGKMELLSDNYYSVYADF-NSATGLKGGANVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G+I + L + K I + L A+++T GL G Y+ L+ +
Sbjct: 60 AGVKIGQIDNIVLLPN-IKIARVKLNIDKEITLSVDVIASVKTAGLLGDRYLSLTPGGSD 118
Query: 121 KKTIFQIATERNQ 133
+ + E +
Sbjct: 119 EYLEAGDSIEETE 131
>gi|328953208|ref|YP_004370542.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
gi|328453532|gb|AEB09361.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
Length = 146
Score = 97.7 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 53/138 (38%), Gaps = 4/138 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV+ L + L G + ++ GL + V
Sbjct: 1 MKKARIELLVGVFVIIGLVCLAYLAIHLGEMEFLGG-GYRLTADF-DNISGLKVGALVEV 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + +++E H + I +Y A++RT+G+ G YI+LS +
Sbjct: 59 AGVDVGKVESIGVNRENMAHVV--LNINKGVIVYQDAIASVRTKGIIGDKYIKLSVGGAD 116
Query: 121 KKTIFQIATERNQRAMIT 138
+ + +
Sbjct: 117 EPLPPNGRIRHTESVLEW 134
>gi|237752256|ref|ZP_04582736.1| ABC transporter permease [Helicobacter winghamensis ATCC BAA-430]
gi|229376498|gb|EEO26589.1| ABC transporter permease [Helicobacter winghamensis ATCC BAA-430]
Length = 272
Score = 97.7 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 32/166 (19%), Positives = 63/166 (37%), Gaps = 3/166 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G+F+V+ L ++W+ + ++ G E + G+ ++ VR+
Sbjct: 1 MEARLNYVLLGVFLVASLVALAGFVFWMGKYDRNLGAYVEYYLYNKELPKGIRIETPVRY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + L ++ + L T A + +QGL G YI L+
Sbjct: 61 LGLPVGFVKSYDLSTAQD-KVEIVLWVKKEIMLKEGTRAIVESQGLTGGNYIALTQGDG- 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+ + Q I S E + +++
Sbjct: 119 -APLTKGGVIDFQENWIEKLGSKTEVVFDRLEVSLDRLNMLLSEKN 163
>gi|300724963|ref|YP_003714288.1| putative ABC transporter periplasmic-binding protein [Xenorhabdus
nematophila ATCC 19061]
gi|297631505|emb|CBJ92212.1| putative transport protein (ABC superfamily, peri_bind)
[Xenorhabdus nematophila ATCC 19061]
Length = 170
Score = 97.7 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG FV+ L F ++ + I ++ GL S V+
Sbjct: 1 MQNKKNEIWVGAFVLIALAAIIFLCLKVADIRSFGNQATYRISAAFDNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ ++LD + I + +++ +IRT GL G YI L+
Sbjct: 61 GGVVIGRVQKIWLDHKTYTP-QVALDIFTQYDNIPDTSSLSIRTSGLLGEQYIALNIGFD 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + + ++ +
Sbjct: 120 DPDLGTAMLKDGDRIEDTKPAMVLED 145
>gi|302342027|ref|YP_003806556.1| Mammalian cell entry related domain protein [Desulfarculus baarsii
DSM 2075]
gi|301638640|gb|ADK83962.1| Mammalian cell entry related domain protein [Desulfarculus baarsii
DSM 2075]
Length = 305
Score = 97.7 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 68/158 (43%), Gaps = 2/158 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK+ +GLFV+S + + + W+ + G V SV GL DS V++
Sbjct: 1 MSSKSSNVRLGLFVLSGITLAVVILVWMGAAKYMKGATTYVTF-FDESVQGLQIDSRVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + + + I D L A ++T G+ GI ++EL R
Sbjct: 60 RGVEVGRVTDVRVAPD-FRLIEVVMEIGFDGDLSHDMVAQLQTIGITGIMFVELDRQRPG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
K + + +I + PS ++ + + + +I
Sbjct: 119 DKAESPVINFAAEHPIIPSKPSEMHRLLGVIDRITNQI 156
Score = 41.8 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 17/177 (9%), Positives = 61/177 (34%), Gaps = 5/177 (2%)
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ ++ ++ ++++ + A +I + +R +
Sbjct: 127 NFAAEHPIIPSKPSEMHRLLGVIDRITNQISRIDFEALGNDINQTIKGVRDLVQDGALKK 186
Query: 323 DQRQKIISTINTIENITSNLNDSSQ-KFAELMSKINNISALKENNSLFKDAQRAMHTFRD 381
+ N L++ + + + N + + ++L +A++A+ R
Sbjct: 187 TVDNMQATAANLESITALVLSEVKGGELRKAVKSFN--TGAQSFDALMGEARQALKDLR- 243
Query: 382 TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ + + L++ + + + + L+ + D+ L E NP +++
Sbjct: 244 -LKETAGQVRELAAVLKDQTVAIAQLTRRTMVNLRSSSGRLDNLLRRLEMNPSYLIF 299
>gi|237751538|ref|ZP_04582018.1| predicted protein [Helicobacter bilis ATCC 43879]
gi|229372904|gb|EEO23295.1| predicted protein [Helicobacter bilis ATCC 43879]
Length = 255
Score = 97.7 bits (240), Expect = 3e-18, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 44/111 (39%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +GL + I+W+ R D + + V G+S ++ V++
Sbjct: 1 MERNINYTLIGLIFCILTIAMIAFIFWIGRFGIDDRRVKIYHVYTQDEVGGISVNTPVKY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI VG + + ++ I P+ + I + G G++Y
Sbjct: 61 KGISVGSVTHMGFKKDDVGVVQIDVAINKKIPVREGSELVIDSDGFVGMSY 111
Score = 37.2 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 23/227 (10%), Positives = 61/227 (26%), Gaps = 11/227 (4%)
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ K+ +V I N V S + D Q + +K
Sbjct: 31 FGIDDRRVKIYHVYTQDEVGGISVNTPVKYKGISVGSVTHMGFKKDDVGVVQIDVAINKK 90
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
I + + + + I + + +T+
Sbjct: 91 IPVREGSELVIDSDGFVGMSYLKLKQNEKGNIIKDEDEATLYLAKNAIGKLLENAQGMTN 150
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
++ D + N +++ ++ + T ++ + + L
Sbjct: 151 DIQDIVSNVKNITDSKN----IEDIRNMLISLEGTKQNLDKTLNSADKLLRDLDKALLRG 206
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCL-------NNFERNPQDIVWGR 440
+ + L+ K ++ + L + ER+P + + G+
Sbjct: 207 DFNVREILTPLINKSGYSLQTLNSFLEKASLFMDRMERDPYETLLGK 253
>gi|121593174|ref|YP_985070.1| hypothetical protein Ajs_0750 [Acidovorax sp. JS42]
gi|120605254|gb|ABM40994.1| Mammalian cell entry related domain protein [Acidovorax sp. JS42]
Length = 161
Score = 97.7 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 41/122 (33%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + + + ++ GL ++VR
Sbjct: 1 MQHSKNDFWVGLFVLLGGAALVFLALQSANLLNLNFRSGYTVTARFDNIGGLKPKAAVRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + ++ I T GL G YI + E
Sbjct: 61 AGVVVGRVQSIGFDVTTY-QARVTLELEKRYVFPKDSSLKILTSGLLGDQYIGIEPGADE 119
Query: 121 KK 122
Sbjct: 120 NN 121
>gi|237756548|ref|ZP_04585073.1| mce related protein [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691291|gb|EEP60374.1| mce related protein [Sulfurihydrogenibium yellowstonense SS-5]
Length = 515
Score = 97.7 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/377 (14%), Positives = 134/377 (35%), Gaps = 25/377 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ VG+FV+ + + + I S + GLS + V+
Sbjct: 1 MKTSQ---KVGIFVLLVSILTGYLIIKFSGKELGQSFKTYYV--YFDDAQGLSKGADVQV 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ GR+ + + A I+ + PLY + T +IRT GL G YI ++
Sbjct: 56 LGVKAGRVEDISFE---NGKVKAILKIKKEIPLYKNATVSIRTYGLMGDKYIYINPGSPN 112
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +NQ I++ E +I+ +++ ++++N+ K
Sbjct: 113 TGNLAENQVIQNQ------------AKIASTEEMINQINVAAQKFAQLMDNLNKATGDDR 160
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + + + ++ + I + S+ + + N
Sbjct: 161 LKKLIEDFDKFASNTNDVVVENKEDIRQSIANIRQITADIRQQLPSIIQNLDKTLENTKN 220
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
EN + D I +T + + +I+ +S+ ++
Sbjct: 221 ITAENREDIRKLIANLKDLSIALKEKAPKTLDSVDKAATQIEQAVSENR-----QDLKLS 275
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ENI ++ N+ ++ + E K+++ + N+ + ++ F + +
Sbjct: 276 IENIKKASQNLNELLAKVNEGKGTLGKLVNQDDLYNNVNEGVKSFAEPFKVVKESNLEVI 335
Query: 361 ALKENNSLFKDAQRAMH 377
E ++ D++
Sbjct: 336 MQGEKHTGNDDSKAGAA 352
>gi|149190596|ref|ZP_01868865.1| putative ABC superfamily transport protein [Vibrio shilonii AK1]
gi|148835594|gb|EDL52562.1| putative ABC superfamily transport protein [Vibrio shilonii AK1]
Length = 160
Score = 97.7 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 3/130 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ VG FV+ L F I+ ++ G ++ R ++ L S V+
Sbjct: 4 TRKLELWVGSFVIIGLCAILFMIFQVADVKGLGSGDTYKLEARF-DNIGSLKVRSPVKVG 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +GR+ + LD+E I D +++A + T GL G YI L
Sbjct: 63 GVVIGRVSDISLDKESYLPV-VTLSISSDYRFPDTSSAQVLTSGLIGEQYIGLVPGFIFD 121
Query: 122 KTIFQIATER 131
+ +R
Sbjct: 122 DEGYLADGDR 131
>gi|259907020|ref|YP_002647376.1| hypothetical protein EpC_03390 [Erwinia pyrifoliae Ep1/96]
gi|224962642|emb|CAX54097.1| Putative membrane protein [Erwinia pyrifoliae Ep1/96]
gi|283476815|emb|CAY72653.1| Uncharacterized protein yrbD precursor [Erwinia pyrifoliae DSM
12163]
Length = 182
Score = 97.7 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L F ++ + +V GL S V+
Sbjct: 1 MQTKKSEIWVGAFLLLALCAIIFLCLRVTDLKSLGNVSTWKLHATFDNVGGLKPGSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + + I + +++ +RT GL G Y+ L+
Sbjct: 61 GGVVIGRVSDIVLDPKTYSP-KVSMDIEDQYNNIPDTSSLAVRTSGLLGEQYLALNIGFD 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + +
Sbjct: 120 DPEMGTAILKNGGTVQDTKSAMVLED 145
>gi|154175509|ref|YP_001408230.1| hypothetical protein CCV52592_1435 [Campylobacter curvus 525.92]
gi|112802187|gb|EAT99531.1| conserved domain protein [Campylobacter curvus 525.92]
Length = 313
Score = 97.7 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++N YT VG+F + + I+W++ + I GL DS V+F
Sbjct: 1 MENRNSYTIVGMFFIFCMSAFAVFIWWMTNHDDSKLQYKNYYIHTSELPSGLKVDSQVKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+P G + + ++ N IR D P+ + A+I TQ ++G+ I +S ++
Sbjct: 61 IGVPAGTVSKIDFVKDDKNALIEITMKIRDDVPIRKDSVASIETQAISGVASINISRGKE 120
Query: 120 EK 121
E
Sbjct: 121 EF 122
>gi|296313906|ref|ZP_06863847.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria polysaccharea ATCC 43768]
gi|296839440|gb|EFH23378.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria polysaccharea ATCC 43768]
Length = 165
Score = 97.7 bits (240), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSV 58
M+ VGLFV+ F + ++ + G V + GL ++ +
Sbjct: 1 MKKNVLEFWVGLFVLIGAAAVAFLAFRVAGGAAFGNSGKTYTVYADFSD-IGGLKANAPI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 60 KSAGVLVGRVGSIELDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 117
>gi|289207569|ref|YP_003459635.1| hypothetical protein TK90_0384 [Thioalkalivibrio sp. K90mix]
gi|288943200|gb|ADC70899.1| Mammalian cell entry related domain protein [Thioalkalivibrio sp.
K90mix]
Length = 152
Score = 97.3 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 2/121 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + +VG+FV+ + F+ +S Y + ++ GL T + V
Sbjct: 1 MKVRFFELAVGVFVLLGVAALFYLAIQVSNVTDYHDRDTYTVTAYFDNIGGLKTRAPVTV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ +GR+ + D E + IR + L T A I T GL G YI L
Sbjct: 61 SGVRIGRVAEIRYDPEQFR-AEVTLAIRAEHDYLPMDTQAAIHTAGLLGEQYIALEPGGD 119
Query: 120 E 120
Sbjct: 120 Y 120
>gi|254467962|ref|ZP_05081368.1| ABC transporter, periplasmic substrate-binding protein [beta
proteobacterium KB13]
gi|207086772|gb|EDZ64055.1| ABC transporter, periplasmic substrate-binding protein [beta
proteobacterium KB13]
Length = 154
Score = 97.3 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 40/122 (32%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV L + D + ++ GL + V+
Sbjct: 1 MDRIKLDAWVGIFVALGLIALMGLAMKVGNLTSNDIKTTYFVTANFENIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + ++ I T A I T GL G YI L
Sbjct: 61 AGVVVGRVDSIVFDTKMYE-AIVTMSIDERYVFPKDTFANIYTAGLLGEQYIGLEAGGDP 119
Query: 121 KK 122
Sbjct: 120 DN 121
>gi|307728303|ref|YP_003905527.1| Mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1003]
gi|307582838|gb|ADN56236.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1003]
Length = 320
Score = 97.3 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + +L + + + + +V GL +D++VR+
Sbjct: 1 MENKSHAFWAGLFTIVLLAAIATAAFLFNVDRAV---RVPYDLIARTNVTGLFSDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+++P + + L+ P+ ST ++ QG+ GI +I+L +
Sbjct: 58 RGLDVGKVQSIKFDRDHPGQIVIRILVDTHAPITHSTYGSLGFQGVTGIAFIQLDDTGHD 117
Query: 121 KKTIFQIA 128
+ A
Sbjct: 118 PSPLPSSA 125
>gi|90580198|ref|ZP_01236005.1| putative ABC superfamily transport protein [Vibrio angustum S14]
gi|90438500|gb|EAS63684.1| putative ABC superfamily transport protein [Vibrio angustum S14]
Length = 159
Score = 97.3 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+K VG+F+++ + + ++ + + + ++ GL S V+ G
Sbjct: 4 NKRLELWVGIFMLAGIAALLVLAFKVANLQSFGSNESYTLKAHFDNIGGLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR--K 119
+ VG + + LD+E + I +++A+I T GL G Y+ +S
Sbjct: 64 VTVGEVTAINLDKETYIP-MVTLSINKKFGYFPETSSASILTSGLLGEQYLGISPGFVDD 122
Query: 120 EKKTIFQIATERNQ 133
+ + + +
Sbjct: 123 DVEMLHNGDLIEDT 136
>gi|322419714|ref|YP_004198937.1| Mammalian cell entry related domain-containing protein [Geobacter
sp. M18]
gi|320126101|gb|ADW13661.1| Mammalian cell entry related domain protein [Geobacter sp. M18]
Length = 561
Score = 97.3 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 40/403 (9%), Positives = 113/403 (28%), Gaps = 13/403 (3%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATI 101
+ V L T S V F I VG++V LD + D + ST
Sbjct: 171 VLHTDDVGSLYTGSPVFFRRIQVGQVVSTDLDGDGQGVTVRVFIRSPYDRFVTASTFFWH 230
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ ++ + + + +Q +T S T + +
Sbjct: 231 ASGVDLTVSPGGVKLNTESMLAVLLGGISFDQPPNPPSTVSAPPNTAYTLYGTRDEALKN 290
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
S +K + + + + + S + F
Sbjct: 291 SAASEKFVLVFRESVRGLAVGATVDLRGVTVGEVTDIDVALDPSRAGFSVPVEIQFYPEH 350
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
L + L + E + + ++ + + + F ++
Sbjct: 351 LLSRGRQGKGGTLPLSGSGETRELLDDLVAHGFRAQIKSGSLLTGQLYVALDFVPGARRT 410
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
S + + + ++ + +
Sbjct: 411 RIDWSSSPPRFPTV----------PGSMEKLQKNLIEIVQKIEKLPLDKLAGDAGQSLRS 460
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
L+++ + ++ ++ + E S +++ A+ R T + + L + +
Sbjct: 461 LDETLKSADRVLKNVDRNL-IPEAKSALAESRTALEDVRKTLAEARTTLGGANQALSSDA 519
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ D+++ +R++ + E++P+ ++ G+++
Sbjct: 520 PVQV-DLRDTLREVSRAAQSLRVLGDYLEQHPESLIRGKKEEK 561
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LDQEYPNH-SLAKALIRPDTPLYPST 97
++ SV GL+ ++V G+ VG + + LD + P+ L
Sbjct: 297 FVLVFRESVRGLAVGATVDLRGVTVGEVTDIDVALDPSRAGFSVPVEIQFYPEHLLSRGR 356
Query: 98 TATIRTQGLAGI 109
T L+G
Sbjct: 357 QGKGGTLPLSGS 368
Score = 41.8 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 38/453 (8%), Positives = 119/453 (26%), Gaps = 39/453 (8%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
++ I+ + + + I +GL + +++ + +G + +
Sbjct: 31 IIPIVAAIIGLSIAVKA---WVDRGQTITISFKT-GEGLEAGKTKLKYKDVMIGEVKSIA 86
Query: 73 LDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELST--LRKEKKTIFQIA 128
+ + + + A + D + T + ++G L+T +
Sbjct: 87 IS-DDRSQVVVTAEVSKDAKGLMVKDTRFWVVRARISGGNVTGLTTLLGGSYIGVEAGAS 145
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI----- 183
TE + + +P ++ + + S + + + ++
Sbjct: 146 TEPRDQFVGLESPPAVSVDVPGRQFVLHTDDVGSLYTGSPVFFRRIQVGQVVSTDLDGDG 205
Query: 184 -----ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + ++ L I
Sbjct: 206 QGVTVRVFIRSPYDRFVTASTFFWHASGVDLTVSPGGVKLNTESMLAVLLGGISFDQPPN 265
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI---------DHLLSDFS 289
+ ++ + D+ + + F+E + + + + +
Sbjct: 266 PPSTVSAPPNTAYTLYGTRDEALKNSAASEKFVLVFRESVRGLAVGATVDLRGVTVGEVT 325
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ + S ++ + + +S + +L +
Sbjct: 326 DIDVALDPSRAGFSVPVEIQFYPEHLLSRGRQGKGGTLPLSGSGETRELLDDLVAHGFRA 385
Query: 350 A---------ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+L ++ + + + + T + EK+ + + I ++
Sbjct: 386 QIKSGSLLTGQLYVALDFVPGARRTRIDWSSSPPRFPTVPGSMEKLQKNLIEIVQKIEKL 445
Query: 401 -SQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
D +R L ET+ D L N +RN
Sbjct: 446 PLDKLAGDAGQSLRSLDETLKSADRVLKNVDRN 478
>gi|284036724|ref|YP_003386654.1| hypothetical protein Slin_1810 [Spirosoma linguale DSM 74]
gi|283816017|gb|ADB37855.1| Mammalian cell entry related domain protein [Spirosoma linguale DSM
74]
Length = 341
Score = 97.3 bits (239), Expect = 4e-18, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 1 MESKNYY--TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M +++ VG+FV+ + ++ L + +++ V GL ++V
Sbjct: 1 MSTESNKRSVVVGIFVLLGIIIFVAGVFVLGGQQKRFTKSFKLMAVFKD-VGGLKVGNNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
F+G+ +G + + + ATI + GL G + ++
Sbjct: 60 WFSGVKIGTVKRISFYGNAQVEVDMNIEESSQQYIRKDADATISSDGLIGNKIVVIAGGT 119
Query: 119 KEKKTIFQIATERN 132
+ +
Sbjct: 120 TSHPQVEDGDRIKT 133
>gi|53803965|ref|YP_114400.1| hypothetical protein MCA1967 [Methylococcus capsulatus str. Bath]
gi|53757726|gb|AAU92017.1| conserved hypothetical protein [Methylococcus capsulatus str. Bath]
Length = 166
Score = 97.3 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 52/136 (38%), Gaps = 5/136 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSV 58
M SK VG+FV L F +S +++ + R +V L ++V
Sbjct: 1 MHSKTIEIWVGIFVALGLASLFLLAMKVSNLSEFETGAEGYRITARF-QNVGSLKPRAAV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + D++ + I L T+A+I T GL G Y+ L+
Sbjct: 60 SMGGVRIGRVTSVSFDKKSYEAV-VEMRIDRQYDTLPDDTSASILTAGLLGEQYVGLTPG 118
Query: 118 RKEKKTIFQIATERNQ 133
+ E Q
Sbjct: 119 GSDDYLADGGQIELTQ 134
>gi|89075258|ref|ZP_01161685.1| putative ABC superfamily transport protein [Photobacterium sp.
SKA34]
gi|89048939|gb|EAR54507.1| putative ABC superfamily transport protein [Photobacterium sp.
SKA34]
Length = 159
Score = 97.3 bits (239), Expect = 5e-18, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 53/134 (39%), Gaps = 4/134 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+K VG+F+++ + + ++ + + + ++ GL S V+ G
Sbjct: 4 NKRLELWVGIFMLAGIAALLVLAFKVANLQNFGSNESYTLKAHFDNIGGLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR--K 119
+ VG + + LD+E + I +++A+I T GL G Y+ +S
Sbjct: 64 VTVGEVTAINLDKETYIP-MVTLSINKKFGYFPETSSASILTSGLLGEQYLGISPGFVDD 122
Query: 120 EKKTIFQIATERNQ 133
+ + + +
Sbjct: 123 DVEMLHNGDLIEDT 136
>gi|310766232|gb|ADP11182.1| hypothetical protein EJP617_15010 [Erwinia sp. Ejp617]
Length = 182
Score = 96.9 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 52/146 (35%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L F ++ + +V GL S V+
Sbjct: 1 MQTKKSEIWVGAFLLLALCAIIFLCLRVTDLKSLGNVSTWKLHATFDNVGGLKPGSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + + I + +++ +RT GL G Y+ L+
Sbjct: 61 GGVVIGRVSDIVLDPKTYSP-KVSMDIEDQYNNIPDTSSLAVRTSGLLGEQYLALNIGFD 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + +
Sbjct: 120 DPEMGTAILKNGGTVQDTKSAMVLED 145
>gi|329851288|ref|ZP_08266045.1| mce related family protein [Asticcacaulis biprosthecum C19]
gi|328840134|gb|EGF89706.1| mce related family protein [Asticcacaulis biprosthecum C19]
Length = 311
Score = 96.9 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/312 (13%), Positives = 99/312 (31%), Gaps = 8/312 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + +Y VGL + +W + ++ + VD L+ + V F
Sbjct: 1 MERQAHYAFVGLVTFVMALILLAFTFWFIKF-DFNQEFGVYDVEFNQPVDFLNKGAEVHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L L + A+ + +TP+ + AT++ QG+ G+ Y+++S
Sbjct: 60 NGIKVGEVTSLRLGKANTAQVFARIKLDSETPIRVDSVATLQPQGITGLLYMQISPGSAS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + S + + + + + + ++ + T
Sbjct: 120 SPLLKRKPGGPPPVIR-----SEESALAKLLQGSGSVVEKTYESLDRVNRLLSDRNIKTF 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ + +I + +M+ S+ T T + + +
Sbjct: 175 SDTLDNLQSITADIENRQQMLDDAHEAVISAGQAADAITKLANSTDGVMAQQLPETLEKI 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDV--RETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ ++ V + D +T QE + ++ ++ + +
Sbjct: 235 NAATDKLATAAERVSVVADSVKGPADQINTQTLPQMQESLENLNEASESLKDLVEQVQQN 294
Query: 299 AFLENIADSTSN 310
Sbjct: 295 PQGLVTKPVAKQ 306
>gi|302341644|ref|YP_003806173.1| Mammalian cell entry related domain protein [Desulfarculus baarsii
DSM 2075]
gi|301638257|gb|ADK83579.1| Mammalian cell entry related domain protein [Desulfarculus baarsii
DSM 2075]
Length = 500
Score = 96.9 bits (238), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/320 (13%), Positives = 98/320 (30%), Gaps = 11/320 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG+FV+ + + L + EV S GL ++ V
Sbjct: 1 MAGVSTEAKVGVFVMVAIALLGYMTLRLGDFQIGEPAGYEVWALF-DSASGLKLNAPVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI +G++ G+ LDQ + I D L A IRT+G+ G ++ +
Sbjct: 60 AGITIGKVAGVSLDQ---GRARITLRINEDVHLPADVQALIRTRGVLGDKFVSIEGGSPA 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ E QR + P+ ++ +S ++ I + ++ I + E
Sbjct: 117 APPL-----ENGQRLARASVPTDLDQVMSRIGQVAEDIGAITSSLKMSIASPESQRNIAQ 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + D + + + + ++D S +
Sbjct: 172 SLSNIKELTDTLKVVIGDNQARLDNIIANLDNFSENISQLSDENRSALTSTIQNFAKASA 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVH--DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + + ++ K D + +T + + + + +
Sbjct: 232 NMEQTMHSLNSVLAKIDDGKGTIGQLVNNDQTVRDLNSTLASLRQVSDKINQGKGTLGRL 291
Query: 299 AFLENIADSTSNMRSSISAI 318
+ D + I+
Sbjct: 292 VNDDATIDKIDQALTGINDY 311
>gi|288575847|ref|ZP_05977713.2| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria mucosa ATCC 25996]
gi|288566868|gb|EFC88428.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria mucosa ATCC 25996]
Length = 183
Score = 96.9 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSV 58
M+ VGLFV+ + F + ++ + G V + GL ++ +
Sbjct: 19 MKKNVLEFWVGLFVLLGVAAVGFLAFRVAGGVAFGNSGKTYTVYADFSD-IGGLKANAPI 77
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + LD + + + + +A I T GL G YI L
Sbjct: 78 KSAGVLVGRVGSIELDPKSY-QAKVRLDLDSKYQFSSDVSAQILTSGLLGEQYIGLQQG 135
>gi|149200414|ref|ZP_01877430.1| possible ABC transport system periplasmic substrate-binding protein
[Lentisphaera araneosa HTCC2155]
gi|149136483|gb|EDM24920.1| possible ABC transport system periplasmic substrate-binding protein
[Lentisphaera araneosa HTCC2155]
Length = 361
Score = 96.9 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 47/442 (10%), Positives = 137/442 (30%), Gaps = 82/442 (18%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + +G+FV++ L ++++L + + + SV GL SSV+
Sbjct: 1 MENK--HFKLGIFVLTGLVLFVLALFYLG-LREQFRKSYDFVTYFDRSVQGLEVGSSVKL 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L ++ + A R + + + + +
Sbjct: 58 KGVTVGRVSSVELWEQ--EYVKVTMS------------AVPRNVSDSEMKEMSEAQAQLR 103
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A ++ R +
Sbjct: 104 FEGYIVEAVDKGLRVSLNY----------------------------------------- 122
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A I + + + + T + +++ D++ ++K++ +
Sbjct: 123 AGITGMKYIELDYVDMKRDNSVELPFTVTETYIPALRSSLEDIVLDVEKIMDGVARIDFQ 182
Query: 241 QILENIQVSSNNFVKSSDQVIN-TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
QI EN + + ++ K+ + ++ ++ ++ID ++ + +
Sbjct: 183 QIGENAEKAMSSAEKTMASLDKFATSELLTLSKDLSSSLKRIDKFTEVLEKEIIAAKVGD 242
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
++ + + + + + + + + S T + I + + S ++ +
Sbjct: 243 TTTSVRKTLAKLDVNSAELNK------ALASVTKTSDMIGKDFSKISDGVTVALATVEK- 295
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
+ + ++ + + + D + T+
Sbjct: 296 ---------------NLKALASLTPQLEKMLAG-EGKIGKAVVGLAKDTSASLDSFDRTL 339
Query: 420 NHFDDCLNNFERNPQDIVWGRE 441
+ + ERNP ++ G+
Sbjct: 340 DSIRRLTDYLERNPNALIQGKN 361
>gi|121609356|ref|YP_997163.1| hypothetical protein Veis_2399 [Verminephrobacter eiseniae EF01-2]
gi|121553996|gb|ABM58145.1| Mammalian cell entry related domain protein [Verminephrobacter
eiseniae EF01-2]
Length = 156
Score = 96.9 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 1/133 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ + F + I ++ GL ++VR
Sbjct: 1 MQRSKNDLWVGLFVLLGVLALVFLALQSANLLSLQWQSGYRITARFDNIGGLKPQAAVRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + ++ ++ I T GL G YI + E
Sbjct: 61 AGVLVGRVQDIAFD-DKSYQARVTLEMQKRYMFPKDSSLKILTSGLLGEQYIGIEAGAHE 119
Query: 121 KKTIFQIATERNQ 133
+ Q
Sbjct: 120 QNLAAGDTVTATQ 132
>gi|217970676|ref|YP_002355910.1| hypothetical protein Tmz1t_2275 [Thauera sp. MZ1T]
gi|217508003|gb|ACK55014.1| Mammalian cell entry related domain protein [Thauera sp. MZ1T]
Length = 305
Score = 96.9 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 3/130 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + + GLF + + F+I+W S PM E+++ G ++GL S VR+
Sbjct: 1 MENRAHALAAGLFAILLGAGVVFAIWWFSGQRV---PMREIVLEARGDINGLGAQSRVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + +D E L + + D PL TTA + T G+ G+ +++L +
Sbjct: 58 RGMAVGSVRAVAIDPEDLRTLLVRIAVPADLPLTRGTTAALGTLGVTGLAFVQLDDRGVD 117
Query: 121 KKTIFQIATE 130
++ + E
Sbjct: 118 RRPLAAADGE 127
Score = 40.7 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 4/89 (4%)
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL----QNFSQSGLNDIQNLVRK 414
S L +A A+ R +I++ + + + L + L+ +
Sbjct: 200 TSVLGNLERGSAEAVPAVAELRRLIVRIDQAAARLELRAAAAGDDLVERTLPQLDVLLGE 259
Query: 415 LQETVNHFDDCLNNFERNPQDIVWGREKG 443
L T F + + +PQ ++ GR++
Sbjct: 260 LTSTSQRFGHLVEELDASPQLLLTGRDRP 288
>gi|302525563|ref|ZP_07277905.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302434458|gb|EFL06274.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 345
Score = 96.9 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 3/130 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G+F V + + ++ +N G A + + GL VR +G+ VG+
Sbjct: 9 IKIGIFAVVTVLLTGVLATTIANTN--FGNTASYVAKFTD-ASGLQAGDDVRISGVKVGQ 65
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + +DQ N++ + L+ L TATI+ + L G Y+ L T T+
Sbjct: 66 VESIGVDQGEQNYAEVRFLVESAYKLPSLATATIKYRNLVGQRYLSLGTDVSGGDTLSPG 125
Query: 128 ATERNQRAMI 137
T +R
Sbjct: 126 DTIPPERTKP 135
>gi|225024504|ref|ZP_03713696.1| hypothetical protein EIKCOROL_01379 [Eikenella corrodens ATCC
23834]
gi|224942655|gb|EEG23864.1| hypothetical protein EIKCOROL_01379 [Eikenella corrodens ATCC
23834]
Length = 156
Score = 96.9 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 1/130 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV + F ++ + + + GL + V+
Sbjct: 1 MKRSTLELWVGVFVALGIAAVVFLSLRVAGGQTVSRQSSYTVSASFTDIGGLKVKAPVKA 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VGR+ + LD + + I +A I T GL G YI L +E
Sbjct: 61 SGVVVGRVSSIQLDPKTYR-ANVSLNIDSQYRFSTDVSAEILTSGLLGEQYIGLQQGAEE 119
Query: 121 KKTIFQIATE 130
+ E
Sbjct: 120 TELKNGDTIE 129
>gi|163795177|ref|ZP_02189145.1| acetyl-CoA carboxylase subunit A [alpha proteobacterium BAL199]
gi|159179575|gb|EDP64104.1| acetyl-CoA carboxylase subunit A [alpha proteobacterium BAL199]
Length = 155
Score = 96.9 bits (238), Expect = 6e-18, Method: Composition-based stats.
Identities = 31/117 (26%), Positives = 47/117 (40%), Gaps = 4/117 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M T +G V+ + Y + + DG EV V GL S VR
Sbjct: 1 MNRSLIETLMGAMVLGVAGLFLMFAYTTADLGRTDG--YEVYANFTT-VGGLRVGSDVRL 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
GI VG + LD E + + P L T+A+I ++GL G +++L+
Sbjct: 58 AGIKVGTVKRQELDPETY-LARVTFSVEPSVKLPADTSASITSEGLLGGNFVDLAPG 113
>gi|209521693|ref|ZP_03270383.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
gi|209497884|gb|EDZ98049.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
Length = 289
Score = 96.9 bits (238), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/295 (14%), Positives = 99/295 (33%), Gaps = 14/295 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + GLF V + + Y + + +V GL D++VRF
Sbjct: 1 MENKAHAFWAGLFTVVLTAAIALAAYLFNVDRTV---RVPYDLIARTNVTGLFVDAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D E+P L + + P+ ST ++ QG+ GI +I+L ++
Sbjct: 58 RGLDVGRVQSIKFDPEHPGQILIRINVDEHAPITHSTFGSLGLQGVTGIAFIQLDDTGRD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + P + + + + + + + +
Sbjct: 118 LTPL------PSSVQKVARLPMRPGLLDQLQQRGDVLLRKLEKVTDNVNDMLSPEMVEQL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ ++ + + + T + + + S ++MI +
Sbjct: 172 HETAASLAQAASGVATLTSQLGPV-----AGKLPGTVDQLNRTLASTNQMITNLQRPDGP 226
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + V + + E +++ L D S +S
Sbjct: 227 LVRNLNKAGTAAQQAGDALAQMNVSLQDLSARVGYETLPRVNSLTEDVRSAAQSI 281
>gi|312170881|emb|CBX79140.1| Uncharacterized protein yrbD precursor [Erwinia amylovora ATCC
BAA-2158]
Length = 182
Score = 96.5 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG F++ L F ++ + + +V GL S V+
Sbjct: 1 MQSKKSEIWVGAFLLLALCAIIFLCLRVTDLKSFGNVSTWKLYATFDNVGGLKPGSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + + I + +++ +RT GL G Y+ L+
Sbjct: 61 GGVVIGRVSDITLDAKSYSP-KVSMDIDERYNNIPDTSSLAVRTSGLLGEQYLALNIGFN 119
Query: 120 EKKT 123
+ +
Sbjct: 120 DPEM 123
>gi|292486813|ref|YP_003529683.1| hypothetical protein EAMY_0325 [Erwinia amylovora CFBP1430]
gi|292900789|ref|YP_003540158.1| exported protein [Erwinia amylovora ATCC 49946]
gi|291200637|emb|CBJ47769.1| putative exported protein [Erwinia amylovora ATCC 49946]
gi|291552230|emb|CBA19267.1| Uncharacterized protein yrbD precursor [Erwinia amylovora CFBP1430]
Length = 182
Score = 96.5 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG F++ L F ++ + + +V GL S V+
Sbjct: 1 MQSKKSEIWVGAFLLLALCAIIFLCLRVTDLKSFGNVSTWKLYATFDNVGGLKPGSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + + I + +++ +RT GL G Y+ L+
Sbjct: 61 GGVVIGRVSDITLDAKSYSP-KVSMDIDERYNNIPDTSSLAVRTSGLLGEQYLALNIGFN 119
Query: 120 EKKT 123
+ +
Sbjct: 120 DPEM 123
>gi|91201079|emb|CAJ74137.1| similar to ABC-transporter component [Candidatus Kuenenia
stuttgartiensis]
Length = 181
Score = 96.5 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +VG+F+ + + L + N +V V GL +++V
Sbjct: 34 MKKFDVEIAVGIFIFCGILCMGYISVKLGKINFLSDNYYQVNAIFST-VKGLKKNTAVEI 92
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L+ + IR D L A+IRT+GL G Y+E++ +
Sbjct: 93 AGVEVGKVDNIVLE---NYEVVVSMKIRKDIKLQEDAIASIRTKGLLGEKYVEITPGGSD 149
Query: 121 KKTIFQIATERNQRA 135
+
Sbjct: 150 HIIEHGGTLIETEPP 164
>gi|224827293|ref|ZP_03700386.1| Mammalian cell entry related domain protein [Lutiella nitroferrum
2002]
gi|224600506|gb|EEG06696.1| Mammalian cell entry related domain protein [Lutiella nitroferrum
2002]
Length = 166
Score = 96.5 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 25/122 (20%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV + F ++ + + ++ GL + V+
Sbjct: 1 MKRTTIDLWVGIFVAIGIAAVTFLSLKVANLTPQSAEASYPLYAEFDNIGGLKVKAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VGR+ + LD + + + T+A I T GL G YI L
Sbjct: 61 SGVVVGRVASIELDTQRY-LAKVTLSLDKRYQFSRDTSAEILTSGLLGEQYIGLVQGGDP 119
Query: 121 KK 122
Sbjct: 120 DN 121
>gi|94264496|ref|ZP_01288283.1| Mammalian cell entry related [delta proteobacterium MLMS-1]
gi|94266596|ref|ZP_01290278.1| Mammalian cell entry related [delta proteobacterium MLMS-1]
gi|93452767|gb|EAT03305.1| Mammalian cell entry related [delta proteobacterium MLMS-1]
gi|93455055|gb|EAT05282.1| Mammalian cell entry related [delta proteobacterium MLMS-1]
Length = 148
Score = 96.5 bits (237), Expect = 7e-18, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 2/117 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K VGLF+++ F + L + + G++ GL + V+
Sbjct: 1 MIAKKLDLMVGLFILAGFFSFVYLSVNLGDFSPLSAQRQYTVQAEFGNISGLRRGAPVQI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + L + I + L A+++TQG+ G YI ++
Sbjct: 61 AGVVVGRVAAIEL--GDRQRAQVTMSIDREVELTDDAIASVKTQGIIGEKYISITPG 115
>gi|326795054|ref|YP_004312874.1| hypothetical protein Marme_1782 [Marinomonas mediterranea MMB-1]
gi|326545818|gb|ADZ91038.1| Mammalian cell entry related domain protein [Marinomonas
mediterranea MMB-1]
Length = 154
Score = 96.5 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K+ VG+F+V + + +S D I+ + GL+ + V
Sbjct: 1 MRNKHTELLVGVFIVLGIAAFGYLAIQVSGLAFSDKKDTYNIVARFDDIGGLTERAKVTI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ VG + + D+EY L + D + ++ I T GL G Y+ ++
Sbjct: 61 AGVTVGEVESISFDKEYFMG-LVTMSVHSDIDNIPTDSSIAILTSGLLGEKYLGITIG 117
>gi|121635619|ref|YP_975864.1| putative outer membrane transport protein [Neisseria meningitidis
FAM18]
gi|120867325|emb|CAM11096.1| putative outer membrane transport protein [Neisseria meningitidis
FAM18]
Length = 159
Score = 96.5 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 43/112 (38%), Gaps = 2/112 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVRFNGIPV 65
VGLFV+ F + ++ + + G + GL ++ V+ G+ V
Sbjct: 2 EFWVGLFVLIGAAAVAFLAFRVAGGAAFGNSGKTYTVYADFGDIGGLKVNAPVKSAGVLV 61
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
GR+ + LD + + + + +A I T GL G YI L
Sbjct: 62 GRVGAIGLDPKSY-QARVRLDLDGKYQFSSDVSAQILTSGLLGEQYIGLQQG 112
>gi|317153920|ref|YP_004121968.1| Mammalian cell entry related domain-containing protein
[Desulfovibrio aespoeensis Aspo-2]
gi|316944171|gb|ADU63222.1| Mammalian cell entry related domain protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 383
Score = 96.5 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 55/396 (13%), Positives = 127/396 (32%), Gaps = 50/396 (12%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K Y +G F++ I L + ++ + SV+GL S V+
Sbjct: 1 MIRKQDYFKLGAFIIVGTTILVAVIIILG-AGKFFKTTYTIETYFNESVNGLDVGSPVKL 59
Query: 61 NGIPVGRIVGLFL--------DQEYPNHSLAKALIRPDT---PLYPSTTATIRTQGLAGI 109
G+ +GR+V + QE + K I PD + +R + G+
Sbjct: 60 RGVNIGRVVDIDFVLNTYPGASQEERRYVYVKCEIEPDIFGEINKEKFSEAVREEVAYGL 119
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
S + + + ++ IN ++ + +T +I +
Sbjct: 120 RVRPTSLGLTGQLFLNLTYDSDDNTPLLPVDWIPINNYVPSVPSTMGRIEATVT------ 173
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ T D I + ++D
Sbjct: 174 ------------------------------AISKTLSGISQEDLGGIIKDIKSITGAIDD 203
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
IKA ++ Q + +I + + ++Q++ R Q Q + +
Sbjct: 204 FIKAEGGKEAGQKVLSILEETRMILARTNQILADPSTTRIIPQAAQAIAGINRIVTESGD 263
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+++ + + S++ + + +I + I + ++ + K
Sbjct: 264 EAVEAVRETRGAMASFRTASDVLAKTLTDPRMDKAMSEIAPALENIGSAARDMAAAVSKI 323
Query: 350 AELMSKINNISALKENN--SLFKDAQRAMHTFRDTS 383
L +++N ++A +E N ++ +D + + +D S
Sbjct: 324 HALANRLNALTASEEANLHAILEDTRVILENIKDIS 359
>gi|330446813|ref|ZP_08310464.1| mlaD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
gi|328491004|dbj|GAA04961.1| mlaD [Photobacterium leiognathi subsp. mandapamensis svers.1.1.]
Length = 159
Score = 96.5 bits (237), Expect = 8e-18, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 52/134 (38%), Gaps = 4/134 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+K VG+F+++ + + ++ + + ++ GL S V+ G
Sbjct: 4 NKRLELWVGVFMLAGIAALLVLAFKVANVQNFGSSETYTLKAHFDNIGGLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR--K 119
+ VG + + LD+E + I +++A+I T GL G Y+ +S +
Sbjct: 64 VTVGEVTSITLDKETYIP-MVTLAINKKFGYFPETSSASILTSGLLGEQYLGISPGFVDE 122
Query: 120 EKKTIFQIATERNQ 133
+ + +
Sbjct: 123 DVDMLHNGDLIEDT 136
>gi|283853768|ref|ZP_06370993.1| Mammalian cell entry related domain protein [Desulfovibrio sp.
FW1012B]
gi|283570830|gb|EFC18865.1| Mammalian cell entry related domain protein [Desulfovibrio sp.
FW1012B]
Length = 336
Score = 96.5 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K T +G FV+ L + +I L S + I+ P SV GL + V F
Sbjct: 1 MSAKTNKTMIGAFVLGALVLAVGAIVALG-SGMFFTKKFHCIMFFPNSVSGLEVGAPVVF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALI 87
G+P+G + + ++ + + I
Sbjct: 60 RGVPIGSVTEISIEADASRLHFYIPVVIEI 89
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/178 (10%), Positives = 55/178 (30%), Gaps = 4/178 (2%)
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
V + L + + + + S R
Sbjct: 159 ESNLPEIPTVPSTFEKLTETIKQLPLQELVDRLIGAVTGIEKLVNSP-ELARMPGKIDSA 217
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTSEK 385
+ + + + I S + +Q E + + ++ + + A+ A+ +F T +
Sbjct: 218 LNTGTDLLNEIKSKVAPLAQNLDEAVQNYSELAKHLDRRTEGISSSAKGALDSFDLTLKD 277
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
I + + + S + D+ + ++ + + ER+P+ ++ G+
Sbjct: 278 SRVAIGNFQKIVNSNS-PTVTDLNRALGEIANAARAIRELSSYLERHPEALIQGKGGP 334
>gi|256828809|ref|YP_003157537.1| Mammalian cell entry related domain protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577985|gb|ACU89121.1| Mammalian cell entry related domain protein [Desulfomicrobium
baculatum DSM 4028]
Length = 152
Score = 96.5 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 56/119 (47%), Gaps = 4/119 (3%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M++ N + S+GLF++ L + + L+ + + G + + V+GL S+V
Sbjct: 1 MKTNNSSLHLSIGLFIIIGLVCTAYLAMTLANTTFFSGDSYTITAKFTA-VNGLRAGSNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ VG++ + LD + ++ I + +TA I+T GL G Y+ +
Sbjct: 60 EISGVAVGKVSSISLD-QTLYQAVITMSIENAVGIPVDSTAAIKTSGLIGDKYVSIIPG 117
>gi|311746377|ref|ZP_07720162.1| ABC transporter, permease component [Algoriphagus sp. PR1]
gi|126575263|gb|EAZ79595.1| ABC transporter, permease component [Algoriphagus sp. PR1]
Length = 327
Score = 96.5 bits (237), Expect = 9e-18, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 79/296 (26%), Gaps = 3/296 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+K VG+FV + + L + + + GL ++V F+
Sbjct: 4 ENKRN-VIVGIFVFVGIAILVAGVLTLGGQQKKFVKAIHLKAVF-DDIGGLQAGNNVWFS 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +G + + + + + ATI + GL G I +
Sbjct: 62 GVKIGTVRKINFYGDSQVEIEMNVEEEVVEFIRKDSKATISSDGLIGNKIIVIYGGTTMA 121
Query: 122 KTIFQIA-TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ E + N + + D + + LT +
Sbjct: 122 PPVEDGDRLESVMPLDTDQMMETLQVNNENLVEITNDLKDLIGKLANGEGIVGAVLTDST 181
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ V + + ++ + N DL+T ++ D
Sbjct: 182 LSDNFKIIVANLKQTSENSNRMLAEMNTFTQKLNKEGNLFNDLVTDTTMAVEIRDAMGSL 241
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ +K N+ + +E + + + S +
Sbjct: 242 KAAAENSEQMTEELKVITDKFNSQDNSIGVLLNDEEFANNLKQTMINTDSATYNLN 297
>gi|260220242|emb|CBA27585.1| Uncharacterized protein HI1085 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 159
Score = 96.2 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 1/111 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + + + ++ GL ++V+
Sbjct: 1 MQRSKNDVWVGLFVLLGALALVFLALQSANLLTFSVDKGYPVTAKFDNIGGLKPKAAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G+ VGR+ + D + + + + ++ I T GL G Y
Sbjct: 61 AGVVVGRVESIGFD-DKTFQAKVQLAMDKRFAFPKDSSLKILTSGLLGEQY 110
>gi|302877780|ref|YP_003846344.1| Mammalian cell entry related domain-containing protein [Gallionella
capsiferriformans ES-2]
gi|302580569|gb|ADL54580.1| Mammalian cell entry related domain protein [Gallionella
capsiferriformans ES-2]
Length = 158
Score = 96.2 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 56/152 (36%), Gaps = 1/152 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME VG+FVV+ + + Y+ + ++ GL +S+R
Sbjct: 1 MERTTLDLWVGMFVVAGIGALVMLAMKVGNLGTYNVSETYQVHAYFSNIGGLKPKASIRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD E + + T A I T GL G YI L +
Sbjct: 61 AGVLVGRVTSISLDTERYE-ANVVMNVDKRYQFPKDTFANILTSGLLGEQYIGLVPGGET 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ ++ Q AM+ G + AE
Sbjct: 120 EMIKDGDLLKQTQSAMVLEDLIGKFMYSKAAE 151
>gi|237749354|ref|ZP_04579834.1| predicted protein [Oxalobacter formigenes OXCC13]
gi|229380716|gb|EEO30807.1| predicted protein [Oxalobacter formigenes OXCC13]
Length = 293
Score = 96.2 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 3/137 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF V L + I W ++ +I S+ GL+ ++VRF
Sbjct: 2 MENKSHAFIAGLFTV-CLVAAALLIVWFLNMDRTVKQ--PYMIATNLSIPGLNPQATVRF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + +++ P L ++ DTP+ ST AT+ QG+ GI IEL+
Sbjct: 59 RGLDVGKVTNIGFNKDDPGEILIYFEVKEDTPMTESTFATLSYQGVTGIASIELNDDETS 118
Query: 121 KKTIFQIATERNQRAMI 137
K + A M
Sbjct: 119 DKRLVTSAENPAHVEMR 135
>gi|41406858|ref|NP_959694.1| hypothetical protein MAP0760 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118465177|ref|YP_880210.1| virulence factor Mce [Mycobacterium avium 104]
gi|41395208|gb|AAS03077.1| hypothetical protein MAP_0760 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118166464|gb|ABK67361.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 340
Score = 96.2 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 76/289 (26%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ +F V + + F + + + V L SVR
Sbjct: 1 MRTRATLIKFAIFAVVMAMLTAFLFFIFGQYRTGATNGYSAV---FTDVSRLKPGQSVRV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG + + L + + K + L T A +R L G Y+EL
Sbjct: 58 AGIRVGTVNSVSLQPD--KKVVVKFDADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGS 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS------RHIQKIIENIEK 174
K + R + + ++ + Q ++
Sbjct: 116 PKRLPAGGQIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTSGLLQVFQGQGGTLDS 175
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
T + ++ ID + + + + S +
Sbjct: 176 LFTKATSFSNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNT 235
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + ++ ++ + T+ + ++D
Sbjct: 236 IGSAIDALDRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDA 284
>gi|54022505|ref|YP_116747.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014013|dbj|BAD55383.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 340
Score = 96.2 bits (236), Expect = 9e-18, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 47/134 (35%), Gaps = 5/134 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + +F + + S+ + S G+ + VR
Sbjct: 1 MRNTATTVKLAIFTLVMTLIFAGLAVVFSQMRFAREHGYHAV---FTSSSGILPGAKVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + + ++Y + + + L ST A I+ + L G Y+EL
Sbjct: 58 AGVPVGSVTSVEVGKDY--LAHVEFDVDRKYRLLTSTRAQIKYENLVGDRYLELLDGPGS 115
Query: 121 KKTIFQIATERNQR 134
+ T +R
Sbjct: 116 ADVLKAGGTIPKER 129
>gi|238764270|ref|ZP_04625222.1| hypothetical protein ykris0001_25360 [Yersinia kristensenii ATCC
33638]
gi|238697551|gb|EEP90316.1| hypothetical protein ykris0001_25360 [Yersinia kristensenii ATCC
33638]
Length = 180
Score = 96.2 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ + F ++ I ++ GL +S V+
Sbjct: 1 MQTKKSEIWVGAFILIAILAVVFLCLKVADIKSVGNQPTYRIYANFDNIGGLKNNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVADITLDTKNYSP-RVAIDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERN 132
+ I +
Sbjct: 120 DPDMGTSILKDGG 132
>gi|223937295|ref|ZP_03629201.1| Mammalian cell entry related domain protein [bacterium Ellin514]
gi|223894080|gb|EEF60535.1| Mammalian cell entry related domain protein [bacterium Ellin514]
Length = 325
Score = 96.2 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 110/316 (34%), Gaps = 12/316 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ T +G+FV+ + +F + + N + P + R ++ L +V+
Sbjct: 1 MKN-TLETRLGIFVLLAVLAAFIILELIGGVNIF-KPGYHLRARF-NNIQDLKVGDAVKM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ + L + DTP++ + ATI+ GL G ++ L
Sbjct: 58 AGVPVGQVEKIQLATN-EAKVEVVLRLNKDTPVHTDSKATIKFTGLMGNYFVALDFGNPN 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ------KIIENIEK 174
+ Q +T +++ K + +
Sbjct: 117 SPKMEQNQLIATTEQPDLSTLIAKLDDVASGVQNLTKSFTGDKIDNLLGPFTDFMRQNNP 176
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
L+ IAN + IS +A + K+++ + + S I + +
Sbjct: 177 KLSAIIANFQGISGQIAEGKGTVGKLIYDDSLYNSAYASVTNLQNTATEIQQTVAEARKV 236
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
Q + ++ ++ K + T+ + +E Q + + L++D +
Sbjct: 237 VDQVNSGQGTVGKLLKDD--KLYVEATATMTNAKEILQKVNQGQGSVGKLINDQEFYKNA 294
Query: 295 KETSAFLENIADSTSN 310
K T L+ + +
Sbjct: 295 KMTLQKLDKATEGLED 310
>gi|187922500|ref|YP_001894142.1| hypothetical protein Bphyt_0493 [Burkholderia phytofirmans PsJN]
gi|187713694|gb|ACD14918.1| Mammalian cell entry related domain protein [Burkholderia
phytofirmans PsJN]
Length = 320
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + +L + + + + +V GL TD++VR+
Sbjct: 1 MENKSHAFWAGLFTIVLLVAIALAGFLFNVDRSV---RVPYDLIARTNVTGLFTDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D +P L + L+ P+ ST ++ QG+ GI +I+L ++
Sbjct: 58 RGLDVGKVQSIKFDPAHPGQILIRILVDTHAPITHSTFGSLGFQGVTGIAFIQLDDNGRD 117
Query: 121 KKTIFQIA 128
+
Sbjct: 118 PTPLASSP 125
>gi|83647975|ref|YP_436410.1| organis solvents resistance ABC transporter periplasmic protein
[Hahella chejuensis KCTC 2396]
gi|83636018|gb|ABC31985.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Hahella chejuensis KCTC
2396]
Length = 149
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + SVG F+V+ + F +S + + V GL V
Sbjct: 1 MRIRTLEISVGAFIVAGIGALFLLALEVSGLSLSPTQDTYKLYAEFTDVGGLRVRGKVSL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+G+ +GR+ + LD + + ++ + I D L + A I T GL G YI +S
Sbjct: 61 SGVTIGRVNSISLDPKS-SKAVVEMDIDADVNYLSADSVAVISTAGLLGEKYINVSIG 117
>gi|325109136|ref|YP_004270204.1| hypothetical protein Plabr_2582 [Planctomyces brasiliensis DSM
5305]
gi|324969404|gb|ADY60182.1| Mammalian cell entry related domain protein [Planctomyces
brasiliensis DSM 5305]
Length = 397
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/352 (13%), Positives = 107/352 (30%), Gaps = 11/352 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLFV++ + + + + P V I + G+ + VR
Sbjct: 1 MSDRQLQFRVGLFVLTAMAIGVGLTFQFGNLDSFFEPRYLVGIEF-DDLSGVHPGTPVRQ 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GIP+G + + +D+ L I PL + Q L G +I+ S
Sbjct: 60 SGIPIGEVKDVSVDR-KKQKVLVVVEILERYPLAKDARPQLV-QSLLGEAHIDFSLGTS- 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A + P + E + + + + T I
Sbjct: 117 PERLDAGALLAGE------MPQDPFAAVERLEKQVTETLQVFAETSNEWKAVGHNVNTLI 170
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + TT + + + K + +
Sbjct: 171 VTNQGSLDDVVEKAALALTELTTTMRKASETLDQTNQFVSDPEMQGAVKDAMTALPKLIQ 230
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-SSKMKSKETSA 299
Q + + + + N + ++ K+D L + + ++ S
Sbjct: 231 QTEQTVATTQQAVSTLGQTMENLRVATGPLAENSGQLTTKLDASLGQLSRTLAQLEKFST 290
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
L S + S R + + + ++ ++ I S++ S K A
Sbjct: 291 QLNEGDGSIQRLASDPQLYRNLQLSSASLAALLSNLDPIVSDMRVFSDKVAR 342
>gi|148555655|ref|YP_001263237.1| hypothetical protein Swit_2744 [Sphingomonas wittichii RW1]
gi|148500845|gb|ABQ69099.1| Mammalian cell entry related domain protein [Sphingomonas wittichii
RW1]
Length = 315
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/297 (16%), Positives = 105/297 (35%), Gaps = 5/297 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ + VG V+++L I WL+ N I SVDGL+ S V F
Sbjct: 1 METRSNHVLVGGVVLALLVALLVFIVWLAGFNTASNQ--RYDIFFKTSVDGLAKGSPVNF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+PVG+I + L + P + I DTP+ TTATI G G++ +
Sbjct: 59 SGVPVGKIEEIKLLPDSPEFVRVRIAIDQDTPILQGTTATIAGIGFTGVS-QINLDGAVK 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T + S E ++ + + R + + + +K ++ +
Sbjct: 118 GAPPITEPGPYGEPVIPTKPGALGELLNSAPELLNRISTLTERLTELLNDKNQKSISGIL 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQ--VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
A+++ +S LA+ I + + + + ++ + +K
Sbjct: 178 AHVDKLSGDLADRGPEIAAAVVQLKTTMEQAGNAAERVGQLAETTNGVMADDVKPAMANL 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ +D +T ++ + + + +
Sbjct: 238 NKATVAAQHTLETLDATITDARPGIKAFSTQTVPQINQLARNLAEMSEALGAISNKL 294
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/179 (16%), Positives = 64/179 (35%), Gaps = 3/179 (1%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
E+ LL+ S+ + +N + + ++ D+ +I + +
Sbjct: 140 LGELLNSAPELLNRISTLTERLTELLNDKNQKSISGILAHVDKLSGDLADRGPEIAAAVV 199
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
++ +++++ +L N + A + + +A + T E ++ I
Sbjct: 200 QLKTTMEQAGNAAERVGQLAETTNGVMA-DDVKPAMANLNKATVAAQHTLETLDATITDA 258
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
++ FS + I L R L E N +R V G K + YKP++
Sbjct: 259 RPGIKAFSTQTVPQINQLARNLAEMSEALGAISNKLDRGGAGAVLGGSK--LPDYKPRN 315
>gi|114564854|ref|YP_752368.1| hypothetical protein Sfri_3702 [Shewanella frigidimarina NCIMB 400]
gi|114336147|gb|ABI73529.1| Mammalian cell entry related domain protein [Shewanella
frigidimarina NCIMB 400]
Length = 149
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 52/133 (39%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ VGLFV+ + F + ++ + ++ + S GL + V
Sbjct: 1 MKNNYVNFLVGLFVLFGIGALVFMSITIGGASVSNSGNYTLVAKFENS-SGLKEGAFVEM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG I + D + K + + + A+IRT G+ G ++++ST E
Sbjct: 60 SGVRVGLIQSINYDPKAYESV-VKISLDNAITVPDDSIASIRTSGIIGDRFVKISTGGSE 118
Query: 121 KKTIFQIATERNQ 133
+
Sbjct: 119 VNMADGEEFIETE 131
>gi|282850035|ref|ZP_06259417.1| virulence factor Mce family protein [Veillonella parvula ATCC
17745]
gi|282580224|gb|EFB85625.1| virulence factor Mce family protein [Veillonella parvula ATCC
17745]
Length = 419
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/345 (10%), Positives = 100/345 (28%), Gaps = 5/345 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F + + I ++ R + + P + V+GL + V+F+G+
Sbjct: 4 TTEAKVGAFTIIGIVLFIAGILFVGRIDIWAKPQMTITGDFTQ-VNGLKNGNQVKFSGVA 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G + + + P + K + T + + ++ + G G +I++S + +
Sbjct: 63 IGTVSDIEI---TPRGVVVKMKLDEKTQIPSDSIFSLGSDGFLGDKFIQISPGQSKVYLQ 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + E + I+ +T +
Sbjct: 120 DGDSVKGEGVDAVDKAMQSAQKLMDGTEKMLQSINSIIGDPATQSALKYSLQSTAVMADN 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ Q + + +T+L + D++ +
Sbjct: 180 AVAITQNMADVTAQLNQAAQQFNADGNAGNDMRAILTNLKQTTDRVDNMARTMESTVTDP 239
Query: 245 N-IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ + G ++ +++ S K + + L N
Sbjct: 240 KAQENIKETLHNTAQISARINKLMGGKAYQTDVNGNSVEVGMTEKKSSTKIEPSVDLLYN 299
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
D+ + + A + + + + S K
Sbjct: 300 TTDNEFRVNGRVRAFNNKGMAEIGLSNMGDDTTFDLNAGRFISSK 344
>gi|262202878|ref|YP_003274086.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262086225|gb|ACY22193.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 344
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 4/103 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G + ++ I + + G GL+ VR G+ VGR+
Sbjct: 12 LLGFAIFGVIALLLTYIIYSTLERSVSGSTNTYTT-FFNDASGLAKGDDVRMAGVRVGRV 70
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ LD + ++ D P++ +T A IR Q L G Y
Sbjct: 71 DKIELD---NGRARVDFEVQKDQPMFTNTKAAIRYQNLIGQRY 110
>gi|296134760|ref|YP_003642002.1| Mammalian cell entry related domain protein [Thiomonas intermedia
K12]
gi|295794882|gb|ADG29672.1| Mammalian cell entry related domain protein [Thiomonas intermedia
K12]
Length = 322
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/305 (17%), Positives = 103/305 (33%), Gaps = 7/305 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MESK YT+VGLFVV + + W + +I +V GL TDS+V +
Sbjct: 1 MESKVNYTAVGLFVVLL-GALLGGLGWWLATGGKQTATRPYLIYATDNVSGLKTDSNVLY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + +D + P K I P+ T A + G+ G++ + L
Sbjct: 60 RGVTVGKVASIEIDPKNPALIRIKVEIDSAVPVRNDTVAQLSPLGVTGLSAVNLIGGASS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR------HIQKIIENIEK 174
+ + I I++A T +IS ++Q I + +
Sbjct: 120 TPLPTPPGEPDPVIPYKPSVFTQIEGGINDAAITLARISQRVDALLSPANVQSISDTLRN 179
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
T + + + + + + TQ++ S + + + + +
Sbjct: 180 LQTLSASLAANQNNINQMFANARQTSANLTQMSAQGSALMLQSQALVKRLDGVSAQLGGL 239
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
Q Q + V T + + + L S + ++
Sbjct: 240 MPQIGAAANSVAQAGDTTTAFTQAGVQAMTQLQTRTLPEVDALARNLQQLSSQLGALTEN 299
Query: 295 KETSA 299
+ +
Sbjct: 300 LKANP 304
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/165 (9%), Positives = 53/165 (32%), Gaps = 2/165 (1%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ + + + + + + + + + S + I T
Sbjct: 147 INDAAITLARISQRVDALLSPANVQSISDTLRNLQTLSASLAANQNNINQMFANARQTSA 206
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ +++ + + L+ +++ +SA + L A ++ + + +
Sbjct: 207 NLTQMSAQGSALMLQSQALVKRLDGVSA--QLGGLMPQIGAAANSVAQAGDTTTAFTQAG 264
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ L ++ L R LQ+ + N + NP +++
Sbjct: 265 VQAMTQLQTRTLPEVDALARNLQQLSSQLGALTENLKANPSQLLY 309
>gi|160900966|ref|YP_001566548.1| hypothetical protein Daci_5534 [Delftia acidovorans SPH-1]
gi|160366550|gb|ABX38163.1| Mammalian cell entry related domain protein [Delftia acidovorans
SPH-1]
Length = 161
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + + + ++ GL ++VR
Sbjct: 1 MQQSKSDVWVGLFVLIGAAALVFLALQSANLLSLNFQKTYTLTARFDNIGGLKPKAAVRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + + ++ I T GL G YI + +
Sbjct: 61 AGVVVGRVESITFD-DKVFQASVTMALENRYAFPKDSSLKILTSGLLGDQYIGIEAGADD 119
Query: 121 KK 122
Sbjct: 120 HN 121
>gi|118466491|ref|YP_881279.1| virulence factor Mce [Mycobacterium avium 104]
gi|118167778|gb|ABK68675.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 342
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 84/301 (27%), Gaps = 13/301 (4%)
Query: 1 MESKNYYT--SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M K V +F L F+F I + D + + ++ GL + + V
Sbjct: 1 MRRKLSSIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAV---FTNISGLKSGNFV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ L L ++ + L T A +R + L G Y+ L
Sbjct: 58 RIAGVEVGKVGDLSLHRD--GTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGP 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENI 172
+ + AT R + + + R Q +
Sbjct: 116 GSPRRLPPGATIPLARTSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTL 175
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L+ T T++ I + + + + +
Sbjct: 176 ASVLSQTSMLTSTLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRR 235
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ I ++ +S + + V + +D+LL +
Sbjct: 236 DDISTGLAYINAAAGSITDLLSQSRQPLKDVVQHTDRMSGQVLSDRDYVDNLLKELPDIY 295
Query: 293 K 293
+
Sbjct: 296 Q 296
>gi|229587080|ref|YP_002845581.1| ABC transporter substrate binding protein [Rickettsia africae
ESF-5]
gi|228022130|gb|ACP53838.1| ABC transporter substrate binding protein [Rickettsia africae
ESF-5]
Length = 149
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G FVV I+ F + + S+ +V S +G++ S V
Sbjct: 1 MQQNIIETIIG-FVVLIIALLFLIFAYKTGSSITSSKGYQVTAHF-QSAEGIAVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI +G + + LD + + I D + + A + T GL G YI +
Sbjct: 59 AGIKIGSVKQITLDPNSFD-ASVYLNINDDVKIPKDSKAQVVTSGLLGGKYISIVPGND 116
>gi|304413073|ref|ZP_07394546.1| periplasmic component of phospholipid ABC transporter [Candidatus
Regiella insecticola LSR1]
gi|304283916|gb|EFL92309.1| periplasmic component of phospholipid ABC transporter [Candidatus
Regiella insecticola LSR1]
Length = 171
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLFV+ F ++ I I +V GL +S V+
Sbjct: 1 MQTKKSEIGVGLFVLVAFIAVIFLCLKVADIKSIGNQSTYRIYAIFNNVGGLKINSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ N I+ + + S++ IRT GL G ++ L+ +
Sbjct: 61 GGVVIGRVADISLDKKNYNP-RVAIDIQENYNHIPNSSSLAIRTAGLLGEQFLALNVGFE 119
Query: 120 EKKT 123
+++
Sbjct: 120 DQEM 123
>gi|269797587|ref|YP_003311487.1| hypothetical protein Vpar_0524 [Veillonella parvula DSM 2008]
gi|269094216|gb|ACZ24207.1| Mammalian cell entry related domain protein [Veillonella parvula
DSM 2008]
Length = 419
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 36/345 (10%), Positives = 100/345 (28%), Gaps = 5/345 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F + + I ++ R + + P + V+GL + V+F+G+
Sbjct: 4 TTEAKVGAFTIIGIVLFIAGILFVGRIDIWAKPQMTITGDFTQ-VNGLKNGNQVKFSGVA 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G + + + P + K + T + + ++ + G G +I++S + +
Sbjct: 63 IGTVSDIEI---TPRGVVVKMKLDEKTQIPSDSMFSLGSDGFLGDKFIQISPGQSKVYLQ 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + E + I+ +T +
Sbjct: 120 DGDSVKGEGVDAVDKAMQSAQKLMDGTEKMLQSINSIIGDPATQSALKYSLQSTAVMADN 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ Q + + +T+L + D++ +
Sbjct: 180 AVAITQNMADVTAQLNQAAQQFNADGNAGNDMRAILTNLKQTTDRVDNMARTMESTVTDP 239
Query: 245 N-IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ + G ++ +++ S K + + L N
Sbjct: 240 KAQENIKETLHNTAQISARINKLMGGKAYQTDVNGNSVEVGMTEKKSFTKIEPSVDLLYN 299
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
D+ + + A + + + + S K
Sbjct: 300 TTDNEFRVNGRVRAFNNKGMAEIGLSNMGDDTTFDLNAGRFISSK 344
>gi|254486700|ref|ZP_05099905.1| paraquat-inducible protein B, putative [Roseobacter sp. GAI101]
gi|214043569|gb|EEB84207.1| paraquat-inducible protein B, putative [Roseobacter sp. GAI101]
Length = 694
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/412 (10%), Positives = 121/412 (29%), Gaps = 23/412 (5%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LDQEYPNHSLAKALIRPDTPLYPST 97
E+ + ++ GL+ + V +G+ +G + L +D S +
Sbjct: 295 ELSVIFEDNISGLAVGAPVELSGLNIGEVESLSGIVDYNQFGDSRVRLNATLSIQPARLG 354
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ A + + + + P + A ++
Sbjct: 355 LPGEVSAASALSLLQDRVANGLRARLASASLLTGGLKVEMILVPDAPPARLVEAGDSYPV 414
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + +E T A + + +M + + T
Sbjct: 415 MPTTENETSDAAATVEGVFTRINNLPIEELLNSAIGLMNSAQMFIGSDELQQTPKDVRTL 474
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ S D + + V++ + + ++++ V V +F
Sbjct: 475 INEVTGLVSSDSVKNIPVTLNATLLRVETLVATLEQEQMAKRLLDAVDSVSAAADSFTTS 534
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
+ + L+++ + + + + + T+ RS+ I
Sbjct: 535 TEGVPALIAEIETVAANAGKLELQQLVDELTALTRSADQVIGT------------PDAVA 582
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ +L ++ + + ++ A++ N A+ A +++ + + + + +
Sbjct: 583 LPGSLKNALDELNYTLQELREGGAIENVNQTLASARNAADNIAVSAQDLPQIVDRLSSLF 642
Query: 398 QNFS---------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
S Q+ +R +Q+ + ERNP ++ GR
Sbjct: 643 TQASRTIEGYNQGDQISRTAQDTMRDIQKAADALASLARTIERNPNSLLLGR 694
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 42/449 (9%), Positives = 125/449 (27%), Gaps = 42/449 (9%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT- 98
+ I +G L+ D+ + + GI VGR+ + + + L S+T
Sbjct: 164 LQIAFRTVGNGQLTDDAPILYRGIEVGRVGKAQISPGGNFAIVEALIYEEHRNLVNSSTR 223
Query: 99 -----------------------ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
AT+ G+ T++ ++ ++ R+
Sbjct: 224 FWDTSGFSLSIGPGGAEVDFESIATLVGGGITFDTFVSGGDRVQDGTVFEIFPSKEEARS 283
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
+ +S + ++ NI + + + ++
Sbjct: 284 SVFNASEVDPLELSVIFEDNISGLAVGAPVELSGLNIGEVESLSGIVDYNQFGDSRVRLN 343
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ P + + + + D + + + A + + + +
Sbjct: 344 ATLSIQPARLGLPGEVSAASALSLLQDRVANGLRARLASASLLTGGLKVEMILVPDAPPA 403
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ ++ + T + ++ + + ++ + ++ + + + + S
Sbjct: 404 RLVEAGDSYPVMPTTENETSDAAATVEGVFTRINNLPIEELLNSAIGLMNSAQMFIGSDE 463
Query: 316 SAIREITDQRQKIISTINTIENITSNL----NDSSQKFAELMSKINNISALKENNSLFKD 371
+ T + N+ N + + L++ + K
Sbjct: 464 LQQTPKDVRTLINEVTGLVSSDSVKNIPVTLNATLLRVETLVATLEQEQMAKRLLDAVDS 523
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN----------- 420
A +F ++E + I I N + L + + + L + +
Sbjct: 524 VSAAADSFTTSTEGVPALIAEIETVAANAGKLELQQLVDELTALTRSADQVIGTPDAVAL 583
Query: 421 --HFDDCLNNFERNPQDIVWGREKGSVKI 447
+ L+ Q++ G +V
Sbjct: 584 PGSLKNALDELNYTLQELREGGAIENVNQ 612
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 3/91 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIV 69
G V I+ + Y+ E+ + G+ + +R+ + VGR+
Sbjct: 20 GASFVWIIPILALFAALSVAWSSYNARGPEIYVEFDKGA-GIKAGETELRYRDVTVGRVE 78
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ E +A + D + +A
Sbjct: 79 EVGFS-EGLGKVVATIRVDKDVAPFIDNSAA 108
>gi|195952558|ref|YP_002120848.1| Mammalian cell entry related domain protein [Hydrogenobaculum sp.
Y04AAS1]
gi|195932170|gb|ACG56870.1| Mammalian cell entry related domain protein [Hydrogenobaculum sp.
Y04AAS1]
Length = 305
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 104/293 (35%), Gaps = 6/293 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E K YT +G F+V + +IY+ + + + I SV GLS S V++
Sbjct: 3 EGKPRYTLIGFFIVFGIGVVVATIYFSTSF-FKNRNLNTYYIFTKYSVAGLSIGSPVKYK 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG++ + + ++ K + + L A++ G+ G++YI+L + K
Sbjct: 62 GVDVGKVNAIKIAKDQET-IKIKISVERNLDLKKDVIASLGITGITGLSYIDLEHEKGVK 120
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + +I PS + + + +++ + T+
Sbjct: 121 AFYD----KDLEAYVIPMKPSELQQISNYIPQILYSAYNLIKNLNNLTSYKNTKKFDTLF 176
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + N++ K + ++ +K I + + + +
Sbjct: 177 DNINDTIKNLNSLIKDSKNSLSNTNKVLTAFNKKINELDVKDINNTVEKYNLLADNLNKE 236
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + + S N + +T + Q+ +++ L+ + +
Sbjct: 237 TTKLDTLLKSLKTNSDMLTNNIYPQINKTLKDIQKTSKEMRILIKHIKNHPNA 289
>gi|126663826|ref|ZP_01734821.1| ABC transporter, permease component [Flavobacteria bacterium BAL38]
gi|126624090|gb|EAZ94783.1| ABC transporter, permease component [Flavobacteria bacterium BAL38]
Length = 324
Score = 95.8 bits (235), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 116/306 (37%), Gaps = 15/306 (4%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
ME + +GLF++ F +IY++ G + + G+V GL ++VR
Sbjct: 1 MEKTDQQKIRLGLFIIIGSLFFLAAIYFVGNKQNLFGNTSNLKAVF-GNVSGLQVGNNVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G + + + + + + + ATI + GL G I + +
Sbjct: 60 YAGMDIGTVKSIEMVNDTTINVSMAIEDKMLIHIKKDAIATIGSDGLVGNMIINIIPGKG 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + ++ Y S+ + K + ++++ + ++ K
Sbjct: 120 NENAVIPGDIIQS-------------YSKSSTDEMLKTLDVTNKNAALLTADLLKITHEI 166
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
T+ ++ +++ D + + + + + +I L++ I + K
Sbjct: 167 NKGNGTVGVLIRDSLMAQDLKATMNYLKETTKGTTASVANLNKMIADLNQKDNVIGVLKD 226
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ ++ +N KSS ++ V ++ T +E +++L +D + K T
Sbjct: 227 KEVAIKVKTIIDNLEKSSGEIDKVVTNLNTTITNIKEGKGALNYLSNDPNLVKKIDSTMI 286
Query: 300 FLENIA 305
L +
Sbjct: 287 NLNEAS 292
>gi|15893029|ref|NP_360743.1| ABC transporter substrate binding protein [Rickettsia conorii str.
Malish 7]
gi|34581283|ref|ZP_00142763.1| ABC transporter substrate binding protein [Rickettsia sibirica 246]
gi|157828951|ref|YP_001495193.1| ABC transporter substrate binding protein [Rickettsia rickettsii
str. 'Sheila Smith']
gi|165933676|ref|YP_001650465.1| toluene transport system protein [Rickettsia rickettsii str. Iowa]
gi|238650382|ref|YP_002916234.1| toluene transport system protein [Rickettsia peacockii str. Rustic]
gi|15620230|gb|AAL03644.1| ABC transporter substrate binding protein [Rickettsia conorii str.
Malish 7]
gi|28262668|gb|EAA26172.1| ABC transporter substrate binding protein [Rickettsia sibirica 246]
gi|157801432|gb|ABV76685.1| ABC transporter substrate binding protein [Rickettsia rickettsii
str. 'Sheila Smith']
gi|165908763|gb|ABY73059.1| toluene transport system protein [Rickettsia rickettsii str. Iowa]
gi|238624480|gb|ACR47186.1| toluene transport system protein [Rickettsia peacockii str. Rustic]
Length = 149
Score = 95.4 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G FVV I+ F + + S+ +V S +G++ S V
Sbjct: 1 MQQNIIETIIG-FVVLIIALLFLIFAYKTGSSITSSKGYQVTAHF-QSAEGIAVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+GI +G + + LD + + I D + + A + T GL G YI +
Sbjct: 59 SGIKIGSVKQITLDPNSFD-ASVYLNINDDVKIPKDSKAQVVTSGLLGGKYISIVPGND 116
>gi|294338721|emb|CAZ87053.1| putative ABC-type transport system involved in resistance to
organic solvents, periplasmic component [Thiomonas sp.
3As]
Length = 322
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 52/305 (17%), Positives = 102/305 (33%), Gaps = 7/305 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MESK YT+VGLFVV + + W + +I +V GL TDS+V +
Sbjct: 1 MESKVNYTAVGLFVVLL-GALLGGLGWWLATGGKQTATRPYLIYATDNVSGLKTDSNVLY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + +D + P K I P+ T A + G+ G++ + L
Sbjct: 60 RGVTVGKVASIEIDPKNPALIRIKVEIDSAVPVRSDTVAQLSPLGVTGLSAVNLIGGASS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR------HIQKIIENIEK 174
+ + I I++A T +IS ++Q I + +
Sbjct: 120 TPLPTPPGEPDPVIPYKPSVFTQIEGGINDAAITLARISQRVDALLSPANVQSISDTLRN 179
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
T + + + + + + TQ++ S + + + +
Sbjct: 180 LQTLSASLAANQNNINQMFANARQTSANLTQMSAQGSALMLQSQALVKRLDGVSAQLGGS 239
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
Q Q + V T + + + L S + ++
Sbjct: 240 MPQIGAAANSVAQAGDTTTAFTQAGVQAMTQLQTRTLPEVDALARNLQQLSSQLGALTEN 299
Query: 295 KETSA 299
+ +
Sbjct: 300 LKANP 304
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/165 (9%), Positives = 52/165 (31%), Gaps = 2/165 (1%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ + + + + + + + + + S + I T
Sbjct: 147 INDAAITLARISQRVDALLSPANVQSISDTLRNLQTLSASLAANQNNINQMFANARQTSA 206
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ +++ + + L+ +++ +SA + A ++ + + +
Sbjct: 207 NLTQMSAQGSALMLQSQALVKRLDGVSA--QLGGSMPQIGAAANSVAQAGDTTTAFTQAG 264
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ L ++ L R LQ+ + N + NP +++
Sbjct: 265 VQAMTQLQTRTLPEVDALARNLQQLSSQLGALTENLKANPSQLLY 309
>gi|226329326|ref|ZP_03804844.1| hypothetical protein PROPEN_03231 [Proteus penneri ATCC 35198]
gi|225202512|gb|EEG84866.1| hypothetical protein PROPEN_03231 [Proteus penneri ATCC 35198]
Length = 178
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 3/148 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VGLFV+ L F ++ + + G++ GL S V+
Sbjct: 1 MQSKKIEVWVGLFVLIALAAVIFLCLKVADIKEMGNQPTYRVYASFGNIGGLKERSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIR---PDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + L +E + + + + S++ +IRT GL G ++ L+
Sbjct: 61 GGVVIGRVSSITLKEEDEGNYRPEVALDILSIYDHIPESSSLSIRTSGLLGEQFLALNLG 120
Query: 118 RKEKKTIFQIATERNQRAMITATPSGIN 145
++ + + + + +
Sbjct: 121 FYDEALDSTLLKDGGRITNTNSAMVLED 148
>gi|227112742|ref|ZP_03826398.1| hypothetical protein PcarbP_07259 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 188
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L F ++ + ++ GL S +R
Sbjct: 1 MQTKKTEVWVGVFMLIALAAILFLCLKVADLKSIGSEPTYRLYATFDNIGGLKARSPIRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD++ I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADISLDEKTY-LPRVAMDIQQRYDHIPDTSSLAIRTSGLLGEQYLALNIGFE 119
Query: 120 EKKTIFQIATERN 132
+++ I +
Sbjct: 120 DEEMGTAILKDGG 132
>gi|41408213|ref|NP_961049.1| hypothetical protein MAP2115c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396568|gb|AAS04432.1| hypothetical protein MAP_2115c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 342
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/301 (13%), Positives = 84/301 (27%), Gaps = 13/301 (4%)
Query: 1 MESKNYYT--SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M K V +F L F+F I + D + + ++ GL + + V
Sbjct: 1 MRRKLSSIAWRVAIFTAVCLLFTFTLIAVFGQLRFEDRTGYQAV---FTNISGLKSGNFV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ L L ++ + L T A +R + L G Y+ L
Sbjct: 58 RIAGVEVGKVGDLTLHRD--GTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGP 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENI 172
+ + AT R + + + R Q +
Sbjct: 116 GSPRRLPPGATIPLARTSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTL 175
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L+ T T++ I + + + + +
Sbjct: 176 ASVLSQTSMLTSTLAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRR 235
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ I ++ +S + + V + +D+LL +
Sbjct: 236 DDISTGLAYINAAAGSITDLLSQSRQPLKDVVQQTDRMSGQVLSDRDYVDNLLKELPDIY 295
Query: 293 K 293
+
Sbjct: 296 Q 296
>gi|295675323|ref|YP_003603847.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1002]
gi|295435166|gb|ADG14336.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1002]
Length = 325
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 105/306 (34%), Gaps = 14/306 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + GLF V + + Y + + +V GL D++VRF
Sbjct: 1 MENKAHAFWAGLFTVVLTAAIALAAYLFNVDRTV---RVPYDLIARTNVTGLFADAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +P L + ++ P+ ST ++ QG+ GI +I+L ++
Sbjct: 58 RGLDVGRVQSIKFDPAHPGQILIRIMVDEHAPITHSTFGSLGLQGVTGIAFIQLDDTGRD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + P + + + + + + + +
Sbjct: 118 LTPLH------SSVHQVAQLPMRPGLLDQLQQRGDVLLRKLEKVTDNVNDMLSPEMVEQL 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ ++ + + M +S T + + + S ++MI ++
Sbjct: 172 HETAASIAQAASGVATLTREMAPV-----ASKLPGTIDQLNHTLASTNQMITGLNRPDGP 226
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+V + + + E +++ L D S +S + +A
Sbjct: 227 LQRNLNKVGTAAQQAGEALTQMNTTMQDLSARVGFETLPRVNSLTEDVRSAAQSIDRAAD 286
Query: 301 LENIAD 306
N
Sbjct: 287 TFNTNP 292
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 51/163 (31%), Gaps = 6/163 (3%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+D L ++ E N S + I + + + + S
Sbjct: 138 LDQLQQRGDVLLRKLEKVTDNVNDMLSPEMVEQLHETAASIAQAASGVATLTREMAPVAS 197
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
L + + ++ N + QR ++ +++ + + +Q+
Sbjct: 198 KLPGTIDQLNHTLASTNQMITGLNRPD--GPLQRNLNKVGTAAQQAGEALTQMNTTMQDL 255
Query: 401 SQ----SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
S L + +L ++ D + F NP+ +++G
Sbjct: 256 SARVGFETLPRVNSLTEDVRSAAQSIDRAADTFNTNPRSVLFG 298
>gi|323700844|ref|ZP_08112756.1| Mammalian cell entry related domain protein [Desulfovibrio sp.
ND132]
gi|323460776|gb|EGB16641.1| Mammalian cell entry related domain protein [Desulfovibrio
desulfuricans ND132]
Length = 383
Score = 95.4 bits (234), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/401 (12%), Positives = 132/401 (32%), Gaps = 50/401 (12%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K Y +GL+++ + L + +Y + SV+GLS S V+
Sbjct: 1 MVRKKDYFKLGLYIILGTGMLLAVVVILG-AGRYFQTTFPLETYFDESVNGLSVGSPVKL 59
Query: 61 NGIPVGRIVGLFLDQE--------YPNHSLAKALIRPDT--PLYPSTTAT-IRTQGLAGI 109
G+ VGR+ + + + + PD + + + G+
Sbjct: 60 RGVQVGRVAEINFVSNIYHDAKSPQSRYVYVRCEVNPDLFKEMTDDEFVEHVAREAKRGM 119
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
S + + I + + + +I + +T ++ ++ I K +
Sbjct: 120 RIRPTSLGLTGQLFLNTIYQDPKTNPPLPIDWTPEYAYIPSVPSTLSRVEEAVTTISKTL 179
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
++ + +I + ++ ++D
Sbjct: 180 SSLRQEDLQSI------------------------------------IKDVKSIVGTIDD 203
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+K ++ + +I S+ + + +D+++ T +
Sbjct: 204 FMKTEGGREAGNRVLDILQSTRSILGRTDRLLADPAAETLIPHTASILSNVDRITSESAD 263
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ +K+ + S + S + +I ++ I +S+L + K
Sbjct: 264 NIIKAAAETRAAIASFKQASQVLSKTLTDPRMDKAMAEIAPSLENISRASSDLAAAVTKV 323
Query: 350 AELMSKINNISALKENN--SLFKDAQRAMHTFRDTSEKINR 388
L++++N ++A +E N S+ +D + M ++ ++ R
Sbjct: 324 HTLINRLNGMAASQEANVRSIIEDTREVMQNVKELTDDAKR 364
>gi|307824570|ref|ZP_07654795.1| Mammalian cell entry related domain protein [Methylobacter
tundripaludum SV96]
gi|307734554|gb|EFO05406.1| Mammalian cell entry related domain protein [Methylobacter
tundripaludum SV96]
Length = 155
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 2/129 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ T VGLFV + + FF +S + + + + + GL S V G
Sbjct: 4 TSTQDTLVGLFVAAGIVGLFFLALQVSNLSSFTEQNSYTVTARFENSGGLKVKSPVSAAG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +G++ + D + + I L TTA++ T GL G Y+ L E+
Sbjct: 64 VKIGKVSAIHFDPKTYESV-VQLSIDSQYNTLPDDTTASVFTAGLLGEQYVNLEAGGSEE 122
Query: 122 KTIFQIATE 130
E
Sbjct: 123 HLKDGGKIE 131
>gi|254773838|ref|ZP_05215354.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 340
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/289 (11%), Positives = 76/289 (26%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ +F V + + F + + + V L SVR
Sbjct: 1 MRTRATLIKFAVFAVVMAMLTAFLFFIFGQYRTGATNGYSAV---FTDVSRLKPGQSVRV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG + + L + + K + L T A +R L G Y+EL
Sbjct: 58 AGIRVGTVNSVSLQPD--KKVVVKFDADRNIVLTEGTRAAVRYLNLVGDRYLELVDGPGS 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS------RHIQKIIENIEK 174
K + R + + ++ + Q ++
Sbjct: 116 PKRLPAGGQIPVSRTAPALDLDLLLGGLKPVTQGLNARDVNALTSGLLQVFQGQGGTLDS 175
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
T + ++ ID + + + + S +
Sbjct: 176 LFTKATSFSNALADNDQTVQQLIDNLNIVIGTISKDGKQFSGAVDRLERLVSGLSDDRNT 235
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + ++ ++ + T+ + ++D
Sbjct: 236 IGSAIDALDRGTASLADLLAQARPPLTGTIDQLNRLAPILDNDKDRLDA 284
>gi|322378618|ref|ZP_08053054.1| ABC transport system substrate binding protein [Helicobacter suis
HS1]
gi|322380553|ref|ZP_08054719.1| ABC transport system substrate-binding protein [Helicobacter suis
HS5]
gi|321147015|gb|EFX41749.1| ABC transport system substrate-binding protein [Helicobacter suis
HS5]
gi|321148925|gb|EFX43389.1| ABC transport system substrate binding protein [Helicobacter suis
HS1]
Length = 291
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 105/284 (36%), Gaps = 5/284 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME YT +G ++ + I WL + D ++ ++G+ ++ + +
Sbjct: 1 MERHVNYTLIGGIFLACMVCMVVFILWLGHFDLEDKDYMGYVMYTDKDLNGIGANTPINY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI +G + + D+ + I+ P++ ++ + +QGL G+ Y+ L +
Sbjct: 61 KGIQIGSVRHVAFDKGHLGMVKLDLRIQSRVPIHKDSSLKVESQGLVGLKYLSLIQSDSK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++R + S +++ + Q + ++ TI
Sbjct: 121 EFY----SKNDSERVLRYEQSFLEKLTSSAGHISNEVLYIIKSIEQILSPQNIDNISKTI 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVT-PHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
A+I+ ++ L N +++++ T ++ + + + +L + + +
Sbjct: 177 ASIQKVTGGLDNTRLALERLLDKATQTAEQATKTLKKGDGFLESGRTLAEHGDQLVVNIN 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + Q+ ++ ++ Q + K D
Sbjct: 237 KKVEDKQYDFKTMLTPLIMQMELSLRNIDNFVQKGSSLIDKFDA 280
Score = 37.2 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 49/162 (30%), Gaps = 9/162 (5%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
++ L S S N+ + I I + +T +E +
Sbjct: 139 LEKLTSSAGHISNEVLYIIKSIEQILSPQNIDNISKTIASIQKVTGGLDNTRLALERLLD 198
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
++++ + + K + + D IN+ + + +
Sbjct: 199 KATQTAEQATKTLKKGDGFLESGRTLAEHGD---------QLVVNINKKVEDKQYDFKTM 249
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ ++ +R + V ++ F+ NP ++G K
Sbjct: 250 LTPLIMQMELSLRNIDNFVQKGSSLIDKFDANPYKTIFGDRK 291
>gi|297537488|ref|YP_003673257.1| Mammalian cell entry related domain-containing protein
[Methylotenera sp. 301]
gi|297256835|gb|ADI28680.1| Mammalian cell entry related domain protein [Methylotenera sp. 301]
Length = 182
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 38/117 (32%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV + + + +V L + V+
Sbjct: 1 MDRTKIDLWVGIFVALGVAALLGLAMKVGNLTSGKIGETYSVTAAFENVGSLKPHAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + + + ++ I T A I T GL G Y+ L
Sbjct: 61 AGVAVGRVDSIAFNSKTYE-AIVTIKIDKRYNFPKDTFANIYTAGLLGEQYVGLEAG 116
>gi|111021671|ref|YP_704643.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110821201|gb|ABG96485.1| MCE family protein [Rhodococcus jostii RHA1]
Length = 338
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 35/295 (11%), Positives = 79/295 (26%), Gaps = 11/295 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + +F + S+ V GL VR G+
Sbjct: 2 RATTVKLLIFATVMSVIFAGLALVFSQYRFSSSDGYHAT---FTDVSGLKPGDKVRIAGV 58
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + + +D + + + L+ T AT+R + L G Y+EL +
Sbjct: 59 PVGAVEKVSIDDDN--LADVDFTVDTKYSLFDGTKATVRYENLVGDRYMELLEGAGSVEP 116
Query: 124 IFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + + + + Q + L
Sbjct: 117 LPDGGSIPVENTSPALDLDLLLGGFKPLLRALDPQQVNDLSQALVQVFQGQGGTLVSLLG 176
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+T + T++ I + D + + S +
Sbjct: 177 STSSFTNTLADRDQLIGEVITNLNQVLGTINDRGDQFRSTLDQLQQLVSGLSQDRDQIGD 236
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ +I +N + + +T+ + T Q +D + +
Sbjct: 237 AIPRIAGATGDLANLLEGARPPLQSTIAEANRTATQLQAGEDDLDWVFQNLPDAY 291
>gi|116747851|ref|YP_844538.1| hypothetical protein Sfum_0403 [Syntrophobacter fumaroxidans MPOB]
gi|116696915|gb|ABK16103.1| Mammalian cell entry related domain protein [Syntrophobacter
fumaroxidans MPOB]
Length = 146
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 4/133 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +VG+F + + + + P V S+ GL ++V
Sbjct: 1 MYRPSLEITVGVFFILGVVCMAYLSLVVGGPGALGEPHYRVNALF-NSITGLRRGAAVEI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG+++ + L+ + IR L T A+IRT+G+ G +++L
Sbjct: 60 AGVRVGKVLDITLENN---QARVVMAIRDGVRLSDDTVASIRTKGIIGEIFVKLIPGGSG 116
Query: 121 KKTIFQIATERNQ 133
+ +
Sbjct: 117 RDIGPGDTLIETE 129
>gi|319942211|ref|ZP_08016527.1| toluene tolerance protein TTG2C [Sutterella wadsworthensis 3_1_45B]
gi|319804264|gb|EFW01156.1| toluene tolerance protein TTG2C [Sutterella wadsworthensis 3_1_45B]
Length = 156
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 2/117 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ +VGLF+V + F + + G + ++ GL ++V+
Sbjct: 3 SNRKLEAAVGLFIVLGFLAALFMALQAANLGSFTFGQKTYAVTADFDNIGGLKARAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D E + + P ++A I T GL G Y+ +
Sbjct: 63 AGVVVGRVRSIVFDPETF-QARVVMDMDARYPFPDDSSAKILTAGLLGEQYVGIEAG 118
>gi|84687032|ref|ZP_01014915.1| paraquat-inducible protein, putative [Maritimibacter alkaliphilus
HTCC2654]
gi|84665006|gb|EAQ11487.1| paraquat-inducible protein, putative [Rhodobacterales bacterium
HTCC2654]
Length = 702
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 48/430 (11%), Positives = 126/430 (29%), Gaps = 30/430 (6%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-----FLDQEYPNHSLA 83
S + E+++ SV GLS S V G+ +G + + D A
Sbjct: 285 SAFSNPFENAVELVVEFKDSVSGLSAGSPVNLRGVRIGSVSAINAIVREGDNGREVRLRA 344
Query: 84 KALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
I P L E R +++F A + A P+
Sbjct: 345 TLSIDPSRLGLGDDDVEETTVIDFLSEAVREGLRARLGFQSLFSQALVVELVRVPEAEPA 404
Query: 143 ---GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
+ + ++ + + ++ I+ + + + + +
Sbjct: 405 ALVLLPDLPPQIPSVQSELPNLGATAEGLLARIDNLPVEEVLDQAIATMAAIETFAADEG 464
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
+ D D+ ++ A+ + + + + +
Sbjct: 465 LREAPDALVSLLDDARGLVGSEDIQALPGEINAAVSDLRTIISTMEQAGAVDQVLSAFKS 524
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
V + + V ++ L+ + E + + + S+ I
Sbjct: 525 VDDAANSVTAFAGDVSGAADEVTELIKRLQALTDKANELELNEFLTSARELVESADRLID 584
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-- 377
+ ++ ++L + + ++ + A++ N+ A A
Sbjct: 585 SDATR------------DLPASLTAALDEARGALADLREGGAVENINATLASAGDAAEAV 632
Query: 378 -----TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL--VRKLQETVNHFDDCLNNFE 430
+ + + +I+ + + + ++ + + + L +R++Q E
Sbjct: 633 EEAAGSLPEIANRIDLLVNETRSVVASYGTNSNFNRETLNSLREIQNAAEALSKLARALE 692
Query: 431 RNPQDIVWGR 440
RNP I++GR
Sbjct: 693 RNPNSILFGR 702
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 35/415 (8%), Positives = 104/415 (25%), Gaps = 32/415 (7%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQ 104
L+ + + GI VGRI L A + L +T + +
Sbjct: 171 TDDAAQLTAGAPIFHKGIEVGRIEQPELLFTRDGVVFDAFIEEPYNELLNSATRFWLTSG 230
Query: 105 G----------LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
L+ + L T+F + + S S N
Sbjct: 231 FSLSLGTGGLDLSVGSLANLVRGGLSFDTVFSGGVPVTEGQVFELYESEDAARSSAFSNP 290
Query: 155 SKKISDSSRHIQKI---------IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + A + + +
Sbjct: 291 FENAVELVVEFKDSVSGLSAGSPVNLRGVRIGSVSAINAIVREGDNGREVRLRATLSIDP 350
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
D T+ D ++ + L + + + V ++ + +
Sbjct: 351 SRLGLGDDDVEETTVIDFLSEAVREGLRARLGFQSLFSQALVVELVRVPEAEPAALVLLP 410
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
D+ + Q + +++ + L+ + + + + +
Sbjct: 411 DLPPQIPSVQSELPNLGATAEGLLARIDNLPVEEVLDQAIATMAAIETFAADEGLREAPD 470
Query: 326 QKIISTINTIENI-TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ + + + ++ + +S + I + E A + D +
Sbjct: 471 ALVSLLDDARGLVGSEDIQALPGEINAAVSDLRTIISTMEQAGAVDQVLSAFKSVDDAAN 530
Query: 385 KINRYIPSIGNNLQNFSQSGLN-----------DIQNLVRKLQETVNHFDDCLNN 428
+ + + ++ ++ + +E V D +++
Sbjct: 531 SVTAFAGDVSGAADEVTELIKRLQALTDKANELELNEFLTSARELVESADRLIDS 585
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 11/108 (10%), Positives = 35/108 (32%), Gaps = 15/108 (13%)
Query: 2 ESKN-----YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD- 55
E++ + V L ++ L + + + + I + G+ D
Sbjct: 12 ETRTRSAWRNLSWVWLVPLAALAVTLGVAWK-----TWADRGRPIEIVF-ENASGVVADE 65
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
++VR+ + +G + + + + + + L + +
Sbjct: 66 TTVRYRDVVIGSVERVGFVAD-LSSIVVTVRVDRTIADSLPENARFWV 112
>gi|294793370|ref|ZP_06758515.1| putative ABC transport system substrate-binding protein
[Veillonella sp. 6_1_27]
gi|294795189|ref|ZP_06760323.1| putative ABC transport system substrate-binding protein
[Veillonella sp. 3_1_44]
gi|294453981|gb|EFG22356.1| putative ABC transport system substrate-binding protein
[Veillonella sp. 3_1_44]
gi|294455801|gb|EFG24166.1| putative ABC transport system substrate-binding protein
[Veillonella sp. 6_1_27]
Length = 419
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/343 (10%), Positives = 101/343 (29%), Gaps = 5/343 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG F + + I ++ R + + P + V+GL + V+F+G+ +G
Sbjct: 6 EAKVGAFTIIGIVLFIAGILFVGRIDIWAKPQMTITGDFTQ-VNGLKNGNQVKFSGVAIG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + P + K + T + + ++ + G G +I++S + +
Sbjct: 65 TVSDIEI---TPRGVVVKMKLDEKTQIPSDSIFSLGSDGFLGDKFIQISPGQSKVYLQDG 121
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + + E + I+ +T + +
Sbjct: 122 DSVKGEGVDAVDKAMQSAQKLMDGTEKMLQSINSIIGDPATQSALKYSLQSTAVMADNAV 181
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN- 245
+ Q + + +T+L + D++ +
Sbjct: 182 AITQNMADVTAQLNQAAQQFNADGNAGNDMRAILTNLKQTTDRVDNMARTMESTVTDPKA 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ ++ + G+ ++ +++ S K + + L N
Sbjct: 242 QENIKETLHNTAQISARINKLMGGKAYQTDVNGKSVEVGMTEKKSSTKIEPSVDLLYNTT 301
Query: 306 DSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
D+ + + A + + + + S K
Sbjct: 302 DNEFRVNGRVRAFNNKGMAEIGLSNIGDDTTFDLNAGRFISSK 344
>gi|229495558|ref|ZP_04389291.1| mce related protein [Porphyromonas endodontalis ATCC 35406]
gi|229317541|gb|EEN83441.1| mce related protein [Porphyromonas endodontalis ATCC 35406]
Length = 302
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/294 (15%), Positives = 101/294 (34%), Gaps = 7/294 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +G F + + +F + +L + + R +V+GLS S V+
Sbjct: 1 MQDPSKLVKIGFFTLLAIALLYFGLNYLKGLAVFGRECSYY-ARFT-NVEGLSVASPVKI 58
Query: 61 NGIPVGRIVGLFLD--QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
NG VG + GL + + +L + I D + T A+I+ + G ++L
Sbjct: 59 NGYKVGTVQGLEFEIAPDGTASTLVQVNIDRDYKIPRGTRASIKAA-IFGGAQLDLQLAT 117
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
++ E N+ A + G A+ K S S Q + K
Sbjct: 118 SQQILAEGDFLETNEGAGDPLSTLGNEILPRVAQLIPKVDSILSSTQQLLATPELKQSIH 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT--DLITSLDKMIKAIDL 236
+ + + + + +T+T D + I +
Sbjct: 178 EAHATLASARSSMQKLDGLMTALQGYTRQDVAPMLGKANSTLTRIDNFSQQLDSINVRQI 237
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ N + + + S + + V + + + + + + D L++DF +
Sbjct: 238 MTNLETTSNELHALSQQLNSKEGTLGKVINDEKLYEDLRSLLTRTDSLVTDFKA 291
>gi|89901708|ref|YP_524179.1| hypothetical protein Rfer_2937 [Rhodoferax ferrireducens T118]
gi|89346445|gb|ABD70648.1| Mammalian cell entry related [Rhodoferax ferrireducens T118]
Length = 162
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 40/117 (34%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + + ++ GL +++R
Sbjct: 1 MQRSKNDVWVGLFVLIGAAAILFLALQAANLLTLSFEKTYQVSAKFDNIGGLKPKAAIRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + ++ I T GL G Y+ L
Sbjct: 61 AGVVVGRVEKIVFD-DKSFQARVTLALEKQYVFPKDSSLKILTSGLLGEQYLGLEPG 116
>gi|298369698|ref|ZP_06981015.1| mce family protein [Neisseria sp. oral taxon 014 str. F0314]
gi|298282255|gb|EFI23743.1| mce family protein [Neisseria sp. oral taxon 014 str. F0314]
Length = 175
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 45/120 (37%), Gaps = 5/120 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSR---SNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M+ VGLFV+ F + ++ + G V + GL T++
Sbjct: 9 MKKSILEFWVGLFVLLGAVAVGFLAFRVAGGTAISGSSGKSYTVYAEFSD-IGGLKTNAP 67
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V+ G+ VGR+ + LD + + + +A I T GL G YI L
Sbjct: 68 VKSAGVLVGRVASISLDPKTY-QAKVSLNLNSQYKFSSDVSAQILTSGLLGEQYIGLQQG 126
>gi|238758307|ref|ZP_04619485.1| hypothetical protein yaldo0001_1940 [Yersinia aldovae ATCC 35236]
gi|238703430|gb|EEP95969.1| hypothetical protein yaldo0001_1940 [Yersinia aldovae ATCC 35236]
Length = 188
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ + F ++ I ++ GL T+S V+
Sbjct: 1 MQTKKSEVWVGVFILIAILAVVFLCLKVADIKSVGNQPTYRIYANFDNIGGLKTNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I+ + +++ +RT GL G ++ LS +
Sbjct: 61 GGVVVGRVAEITLDTKNYTP-RVAMDIQQRYNHIPDTSSLAVRTSGLLGEQFLALSVGFE 119
Query: 120 EKKTIFQIATERN 132
+ + I +
Sbjct: 120 DPEMGTGIVKDGG 132
>gi|188996339|ref|YP_001930590.1| Mammalian cell entry related domain protein [Sulfurihydrogenibium
sp. YO3AOP1]
gi|188931406|gb|ACD66036.1| Mammalian cell entry related domain protein [Sulfurihydrogenibium
sp. YO3AOP1]
Length = 515
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 55/377 (14%), Positives = 133/377 (35%), Gaps = 25/377 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ VG+FV+ I + + I S + GLS + V+
Sbjct: 1 MKTSQ---KVGIFVLLISILTGYLIIKFSGKELGQSFKTYYV--YFDDAQGLSKGADVQV 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ GR+ + + A I+ + PLY + T +IRT GL G YI +
Sbjct: 56 LGVKAGRVEDIAFE---NGKVKALLKIKEEIPLYKNATVSIRTYGLMGDKYIYIDPGSPN 112
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +NQ +++ E ++ S++ ++++N+ K L
Sbjct: 113 AGNLAENQVIQNQ------------AKVASTEEMINQVQISAQKFAQLMDNLNKALGDDR 160
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + + + ++ + I + S+ + + N
Sbjct: 161 LKKLIEDFDKFASNTNDVVVENKEDIRQSIANIRQITADIRQQLPSIIQNLDKTLENTKN 220
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
EN + D + +T + + +I+ +S+ ++
Sbjct: 221 ITAENREDMRKLIANLKDLSVALKEKAPKTLDSVDKAATQIEQAVSENR-----QDLKLS 275
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ENI ++ N+ ++ + E K+++ + N+ + ++ F + +
Sbjct: 276 IENIRKASQNLNELLAKVNEGKGTLGKLVNQDDMYNNVNEGIKSFAEPFKVVKESNLEVI 335
Query: 361 ALKENNSLFKDAQRAMH 377
E ++ D++
Sbjct: 336 MQGEKHTGNDDSKAGAA 352
>gi|260596177|ref|YP_003208748.1| hypothetical protein CTU_03850 [Cronobacter turicensis z3032]
gi|260215354|emb|CBA27352.1| Uncharacterized protein yrbD [Cronobacter turicensis z3032]
Length = 183
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + VG F++ L + F ++ + ++ GL + S VR
Sbjct: 1 MQTKKFEIWVGAFMLVALLAALFICLKVADVTSLRAEPTYRLYATFDNIGGLKSHSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVSDITLDPKTY-LPRVAMDIEQRYDHIPDTSSLAIRTSGLLGEQYLALNVGFE 119
>gi|253686688|ref|YP_003015878.1| Mammalian cell entry related domain protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251753266|gb|ACT11342.1| Mammalian cell entry related domain protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 188
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L F ++ + ++ GL S +R
Sbjct: 1 MQTKKTEVWVGVFMLIALAAILFLCLKVADLKSIGSEPTYRLYATFDNIGGLKARSPIRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADISLDEKTY-LPRVAMDIQQRYDHIPDTSSLAIRTSGLLGEQYLSLNIGFE 119
Query: 120 EKKTIFQIATERN 132
++ I +
Sbjct: 120 DEDMGTTILKDGG 132
>gi|270159894|ref|ZP_06188550.1| toluene tolerance protein Ttg2C [Legionella longbeachae D-4968]
gi|289165352|ref|YP_003455490.1| toluene transporter subunit: membrane component of ABC superfamily
[Legionella longbeachae NSW150]
gi|269988233|gb|EEZ94488.1| toluene tolerance protein Ttg2C [Legionella longbeachae D-4968]
gi|288858525|emb|CBJ12406.1| toluene transporter subunit: membrane component of ABC superfamily
[Legionella longbeachae NSW150]
Length = 158
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 2/134 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + SVGLF++ + +S + + + + GL + V
Sbjct: 3 KQRYVDFSVGLFMLLGVLALLVMTMKVSNFSNFMSQDHYQVTAGFTDIGGLKVRAPVTVA 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY-PSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + L ++ +R D + T+A I T+GL G YI + ++
Sbjct: 63 GVKIGEVTHIELQP-GELNAKVTMRLRSDKKIPYEDTSARILTEGLLGSNYISIVPGFED 121
Query: 121 KKTIFQIATERNQR 134
+++
Sbjct: 122 EESKDHPYLRNGDV 135
>gi|251791364|ref|YP_003006085.1| mammalian cell entry related domain-containing protein [Dickeya
zeae Ech1591]
gi|247539985|gb|ACT08606.1| Mammalian cell entry related domain protein [Dickeya zeae Ech1591]
Length = 214
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + VG+F++ L F ++ + ++ GL S V+
Sbjct: 1 MQTKKHEIGVGVFMLIALCAIVFLCLKVADLKSLGQQQTYRLYATFDNIGGLKARSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADISLDTKTY-LPRVAMDIDKRYDHIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
++ I + + +
Sbjct: 120 DEDMGTSILKDGGTIQDTKSAMVLED 145
>gi|239814163|ref|YP_002943073.1| hypothetical protein Vapar_1156 [Variovorax paradoxus S110]
gi|239800740|gb|ACS17807.1| Mammalian cell entry related domain protein [Variovorax paradoxus
S110]
Length = 163
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ N VGLFV+ F + + + ++ GL ++V+
Sbjct: 1 MQRSNNDIWVGLFVLIGGAALLFLALQSANLLSLNFQKTYNVTARFDNIGGLKPQTAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + ++ ++ I T GL G YI +
Sbjct: 61 AGVVVGRVESISFD-DKSFQASVTLALQNRYSFPKDSSLKILTSGLLGEQYIGIEAG 116
>gi|120406149|ref|YP_955978.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958967|gb|ABM15972.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 341
Score = 95.0 bits (233), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/308 (14%), Positives = 101/308 (32%), Gaps = 9/308 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K +VG+F V++L + + L VR
Sbjct: 1 MRDK-TLINVGVFTVAMLLVAAMLVVVFGEFRFASEDKYHAT---FTDASRLKAGQDVRI 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + GL L+ + + LY ST A +R + L G Y+E+++ +
Sbjct: 57 AGVPVGTVEGLTLNPDNT--VDVAFTVNDRYQLYTSTKAVVRYENLVGDRYLEITSGPGD 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T + + KI++ S + ++++ L+ +
Sbjct: 115 LVKLPKGGTITHTEPALDLDALLGGLKPVVKGLDGAKINEISNAVIELLQGEGGALSAML 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+N + LA I +++ + D K + + + + +
Sbjct: 175 SNTSAFTQNLAARDQLIGDVINNLNTVLGTVDEKGAE---FNASVDQLQKLITGLAEGRD 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I I + + + + V+ + + Q++D D + ++ +
Sbjct: 232 PIAGAIGPLATAENDLTAMLEASRRPVQGVIENVRPFAQRMDERKGDVNKVIEPLAENYL 291
Query: 301 LENIADST 308
N +
Sbjct: 292 RLNALGAY 299
>gi|330432402|gb|AEC17461.1| conserved hypothetical protein [Gallibacterium anatis UMN179]
Length = 169
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 3/121 (2%)
Query: 1 MESKNYY-TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M++ Y VGLF++ + F ++ + + ++ GL + V+
Sbjct: 1 MKNAMKYEFWVGLFLLLGIAALVFLGLKVANIQNFSESQTYRVEATFDNIGGLKVRAPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + LD +I + +++ +I+T GL G YI L+
Sbjct: 61 IGGVVVGRVSKIELDPTTY-LPKVTLVIDQQYNQIPDNSSLSIKTAGLLGEQYIALNIGF 119
Query: 119 K 119
Sbjct: 120 D 120
>gi|183597952|ref|ZP_02959445.1| hypothetical protein PROSTU_01301 [Providencia stuartii ATCC 25827]
gi|188022724|gb|EDU60764.1| hypothetical protein PROSTU_01301 [Providencia stuartii ATCC 25827]
Length = 169
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 2/119 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG F++ + F ++ I ++ GL S V+
Sbjct: 1 MQSKKSEVWVGCFILLAIAAIIFLCLKVADIKSLGSQSTYQISASFENIGGLKEGSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ +GR+ + L++E K + + + +++ +IRT GL G YI ++
Sbjct: 61 GGVVIGRVASITLNKETY-VPDVKIDLLSEYNNIPDTSSLSIRTSGLLGEQYIAMNIGP 118
>gi|254489713|ref|ZP_05102909.1| mce related protein [Methylophaga thiooxidans DMS010]
gi|224465122|gb|EEF81375.1| mce related protein [Methylophaga thiooxydans DMS010]
Length = 154
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 54/135 (40%), Gaps = 2/135 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K+ VG+FV + L F +S + + ++ GL S+V
Sbjct: 1 MQNKSTEIFVGMFVAAGLAALFMLAMKVSNLGDFTDETGYQVTAEFENIGGLKVRSAVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + L N + + P L T+A+I T GL G YI L +
Sbjct: 61 AGVRVGRVASINLHPVTYN-AEVTINMYPQFDNLPLDTSASIYTAGLLGEQYIGLVAGAE 119
Query: 120 EKKTIFQIATERNQR 134
E+ + Q
Sbjct: 120 EEFLQDGDVIDLTQP 134
>gi|323524593|ref|YP_004226746.1| mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1001]
gi|323381595|gb|ADX53686.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1001]
Length = 320
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF V +L + + + + +V GL TD++VR+
Sbjct: 1 MENKSHAFWAGLFTVVLLGAIATAAFLFNVDRAV---RVPYDLIARTNVTGLFTDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+++P + + L+ P+ ST ++ QG+ GI +I+L ++
Sbjct: 58 RGLDVGKVQSIKFDRDHPGQIVIRILVDTHAPITHSTFGSLGFQGVTGIAFIQLDDTGRD 117
Query: 121 KKTIFQIA 128
+
Sbjct: 118 PSPLASSP 125
>gi|15604561|ref|NP_221079.1| hypothetical protein RP724 [Rickettsia prowazekii str. Madrid E]
gi|3861256|emb|CAA15155.1| unknown [Rickettsia prowazekii]
gi|292572368|gb|ADE30283.1| ABC transporter substrate binding protein [Rickettsia prowazekii
Rp22]
Length = 149
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 47/119 (39%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G V+ I Y + ++ +VI + +G++ S V
Sbjct: 1 MQQNIVETIIGFLVLIIGLLFLIFAYK-TGTSIITSRGYQVIANF-QNAEGIAVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+GI VG + + LD + ++ I D + + A + T GL G YI +
Sbjct: 59 SGIKVGSVTQITLDPDRF-YASVYLNINDDVKIPKDSKAQVVTSGLLGGKYIAIIPGNG 116
>gi|332163078|ref|YP_004299655.1| hypothetical protein YE105_C3458 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318604042|emb|CBY25540.1| uncharacterized ABC transporter, periplasmic component YrbD
[Yersinia enterocolitica subsp. palearctica Y11]
gi|325667308|gb|ADZ43952.1| hypothetical protein YE105_C3458 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330862751|emb|CBX72893.1| uncharacterized protein yrbD [Yersinia enterocolitica W22703]
Length = 186
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ + F ++ I ++ GL +S V+
Sbjct: 1 MQTKKSEVWVGAFILIAILAVVFLCLKVADIKAVGNQPTYRIYANFDNIGGLKNNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVAEITLDTKNYSP-RVAMDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERN 132
+ I +
Sbjct: 120 DPDMGTGILKDGG 132
>gi|317494032|ref|ZP_07952448.1| hypothetical protein HMPREF0864_03217 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316917805|gb|EFV39148.1| hypothetical protein HMPREF0864_03217 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 179
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/146 (17%), Positives = 54/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L F ++ I ++ GL S ++
Sbjct: 1 MQTKKSEIWVGVFMLIALCAVVFLCLQVANVKSLGNEPTYRIYATFDNIGGLKARSPIKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ IRT GL G ++ L+ +
Sbjct: 61 GGVVIGRVADITLDPKTY-LPRVAMDINEQYNNIPDTSSLAIRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + +
Sbjct: 120 DPEMGTAILKDGGTIQDTKSAMVLED 145
>gi|313672873|ref|YP_004050984.1| mammalian cell entry related domain protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312939629|gb|ADR18821.1| Mammalian cell entry related domain protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 526
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 44/345 (12%), Positives = 101/345 (29%), Gaps = 4/345 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG FV+ L + + N + + + GL+TD+ V+F G+ VG
Sbjct: 6 EAKVGFFVIVSLIVLGYMTTKVGDFNFGKDKGYSIKAVL-NNASGLNTDAPVKFKGVNVG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + L+ +A+ LI + +R+ G G Y EL L ++
Sbjct: 65 KVKNISLE---DGKVVAEMLIEDKYKIPAKVRVIVRSSGFLGEKYAELEELPEQTGEYLA 121
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ +T N A++ S + +T T
Sbjct: 122 AGSIVKDTKDVTDFDQLGNKLGDIADDIKAITSSLRDVLATTEGKENMKVTLDNIRQTTD 181
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + + KN + I L +K + Q +
Sbjct: 182 VLKNIMAYNEARINAVIKNIEAITVVVKNMATDNQENINQLLANLKDVSQTLKEQTPQIA 241
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
++ D V + ++ ++ + + V K++ + + +S
Sbjct: 242 GKVNSITGNIDDLVTGSKGNLEDSIKNIKTVTAKLEKTVDNINSITDKINKGEGTIGKLI 301
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + +++ + + N + +
Sbjct: 302 NDNQTVDNLNETLKGVRNLFTKMDEFKFYLNFEGEKLMDTGETKG 346
>gi|261819644|ref|YP_003257750.1| hypothetical protein Pecwa_0290 [Pectobacterium wasabiae WPP163]
gi|261603657|gb|ACX86143.1| Mammalian cell entry related domain protein [Pectobacterium
wasabiae WPP163]
Length = 188
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L F ++ + ++ GL S +R
Sbjct: 1 MQTKKTEVWVGVFMLIALAGILFLCLKVADLKSIGSEPTYRLYATFDNIGGLKARSPIRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADISLDEKTY-LPRVAMDIQQRYDHIPDTSSLAIRTSGLLGEQYLALNMGFE 119
Query: 120 EKKTIFQIATERN 132
+++ I +
Sbjct: 120 DEEMGTTILKDGG 132
>gi|123443933|ref|YP_001007904.1| hypothetical protein YE3750 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122090894|emb|CAL13776.1| putative membrane protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 186
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ + F ++ I ++ GL +S V+
Sbjct: 1 MQTKKSEVWVGAFILIAILAVVFLCLKVADIKAVGNQPTYRIYANFDNIGGLKNNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVAEITLDTQNYSP-RVAMDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERN 132
+ I +
Sbjct: 120 DPDMGTGILKDGG 132
>gi|160895816|ref|YP_001561398.1| hypothetical protein Daci_0367 [Delftia acidovorans SPH-1]
gi|160361400|gb|ABX33013.1| Mammalian cell entry related domain protein [Delftia acidovorans
SPH-1]
Length = 320
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 3/113 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FV+ + WL+R + E + + GL ++VR+
Sbjct: 1 MENKSHAMAAGIFVLVVAALLAGLAIWLTRDTR---QYNEYELSTKDGISGLQAQAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
G+ VG++ + D + + L + I +TP+ P+T A + QG+ G+ +++
Sbjct: 58 KGVAVGKVTQIGFDPQTNGNVLIRIAIGVNTPITPTTFAVLGYQGVTGLAHVQ 110
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 14/200 (7%), Positives = 43/200 (21%), Gaps = 25/200 (12%)
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
V + + L S + + ++ + +
Sbjct: 100 YQGVTGLAHVQLDDADQPQPQLPPGPSGLPRLPLRSSPLSMLADQGQVLLERADEISRRL 159
Query: 324 QRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTS 383
+ N+ ++ +L ++ + L DA + + S
Sbjct: 160 SDMLDTDNQKRVSQALENIAAAAAGVQQLTQNLDRTL-STQVPQLAADAHNTLQSLEKAS 218
Query: 384 EKINRYIPSIGNNLQNFSQS------------------------GLNDIQNLVRKLQETV 419
+ + ++ + + +
Sbjct: 219 NGASAVASELQQTVRRVNAQDGPLEQIAQSTRALTRMADSLGRSTVPHANRAADDVSRAA 278
Query: 420 NHFDDCLNNFERNPQDIVWG 439
+ F NPQ +++G
Sbjct: 279 RQMGTAASRFSDNPQAVIYG 298
>gi|15606676|ref|NP_214056.1| hypothetical protein aq_1533 [Aquifex aeolicus VF5]
gi|2983901|gb|AAC07452.1| putative protein [Aquifex aeolicus VF5]
Length = 300
Score = 94.6 bits (232), Expect = 3e-17, Method: Composition-based stats.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 2/112 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E + Y VGLF++ L + F ++ ++ +I SV+GL+T ++V +
Sbjct: 6 EGRVNYILVGLFILLGLGVTLFVLFLMTDI-MEREKFRPYLIYTTQSVEGLNTGAAVYYK 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
G+ VG++ + + + K LI D + AT+ QG+ G+ YI
Sbjct: 65 GVQVGKVKEIKIAKNQ-ELIKIKVLIDKDFKVRDGLVATLGVQGITGLAYIN 115
>gi|108797099|ref|YP_637296.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866184|ref|YP_936136.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126432722|ref|YP_001068413.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|108767518|gb|ABG06240.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692273|gb|ABL89346.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126232522|gb|ABN95922.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 343
Score = 94.2 bits (231), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 91/296 (30%), Gaps = 9/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G F + +L F+ I + +V GL VR
Sbjct: 1 MKITGTALKLGAFSLVLLLFTAIIIVVFGQMR--FDRTTGYSAIFT-NVSGLRPGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ + L E + + PL+ +TA++R L G Y+EL +
Sbjct: 58 SGVEVGKVSKIELI-EGGSRVKVDFKVDRSLPLFDESTASVRYLNLIGDRYLELKRGDSD 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIEKP 175
+K + + I F E + Q I
Sbjct: 117 RKMPSGGTIPVERTEPALDLDALIGGFRPLFRALDPEKVNNIARSIITVFQGQGGTINDI 176
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L T + ++ I + T + + + + + K
Sbjct: 177 LDQTASLTSALADRDQAIGEVIRNLNTVLDTTVRHQEQFDETLVNFERLITGLKNRADPI 236
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
V I + ++ ++ + +TV + T Q E +++ +L +
Sbjct: 237 ASSVADISDAAGTVADLLAENRSLLQDTVGYLEATQQPLVEQKGQLNDILVRLPNA 292
>gi|323528334|ref|YP_004230486.1| Mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1001]
gi|323385336|gb|ADX57426.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1001]
Length = 431
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/427 (10%), Positives = 112/427 (26%), Gaps = 24/427 (5%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS-VRFNGIPVGRIVGLFLDQEY 77
+F WL + A V + + G+ D + V G+ VG + + L +
Sbjct: 27 IAAFAVTGWLG-VRAFVREGATVTVSF-DNAYGMKPDDTIVTLRGVKVGAVSQIALAPDG 84
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
H A+ I Y + G + A ++
Sbjct: 85 -QHVQAELRIDRAEKKYLRS----------GTKFFLRGAHVDLSDPASMKAMLSGPEIVM 133
Query: 138 TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI 197
+ + ++ + ++ +
Sbjct: 134 DPGSGEPASHFDGLDRRPALAPGHGPIVTYLVRFDGAVGELKNGAKVQLRGFDVGTVTSV 193
Query: 198 DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSS 257
+ + ++ + + + +
Sbjct: 194 RLNYDARTGALSTPVQIALNPSQLGIVGAPPPANGDWRPLVDGMLGRLVSTGLRARLSQD 253
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
VI + Q + LS S + +A + ++
Sbjct: 254 PPVIGADKINLDFVQGAPAATLASEDGLSVIPSAPAA----NLDTTMAKANEVIQKIDDL 309
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
T ++ + I+ + + + DS +++I+ + +
Sbjct: 310 PIRQTGEQVRSIAAHINALSSSPQIRDSLTHIDHSVAQIDRTL-----QQVTPQIGPLVT 364
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
R+T+ R + + L S ND+ +++L +T + +R+P+ +V
Sbjct: 365 QLRETASSAERTVAAANRTL-GADASSQNDLPATLQELTDTARSIRALADYLDRHPEALV 423
Query: 438 WGREKGS 444
GR+K +
Sbjct: 424 EGRQKEA 430
>gi|118616796|ref|YP_905128.1| MCE-family protein Mce1B [Mycobacterium ulcerans Agy99]
gi|118568906|gb|ABL03657.1| MCE-family protein Mce1B [Mycobacterium ulcerans Agy99]
Length = 346
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 4/128 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+F + ++ FS I + + GL VR
Sbjct: 1 MKITGTAIRLGIFSLVLMLFSVMIIIVFGQIR--FDRTYAYSAEFS-NASGLRPGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G++ + L + + PLY ST+A IR L G Y+EL +
Sbjct: 58 SGVEIGKVKSVSLI-DGGKRVRVNFDVDRSVPLYQSTSAQIRYLDLIGNRYLELKRGEGD 116
Query: 121 KKTIFQIA 128
Sbjct: 117 GSDRIMPP 124
>gi|254818329|ref|ZP_05223330.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 340
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 75/289 (25%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ F V + + F + + G V L SVR
Sbjct: 1 MRTRATLIKFATFAVVMAVLTAFLFFIFGQYRT--GATTGYSAVF-NDVSRLKPGESVRV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG + + L + + K + L + A +R L G Y+EL
Sbjct: 58 AGIRVGTVDSVSLRPD--KKVVVKFDADRNVVLTEGSRAAVRYLNLVGDRYLELLDGPGS 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKK------ISDSSRHIQKIIENIEK 174
K + R + + + + Q IE
Sbjct: 116 PKRLPAGGQIPVSRTAPALDLDLLLGGLKPVTQGLNPHDVNALTAGLLQVFQGQGGTIES 175
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
T T + ++ ID + + + + S +
Sbjct: 176 LFTKTTSFSNALADNDQTVQQLIDNLNTVIGTIAKDGKQFSGAIDRLEQLVSGLSNDRDT 235
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + ++ ++ + T+ + +ID
Sbjct: 236 IGSAIDALDRGTASLADLLAEARPPLSGTIAQLNRLAPILDNDKDRIDT 284
>gi|254435434|ref|ZP_05048941.1| mce related protein [Nitrosococcus oceani AFC27]
gi|207088545|gb|EDZ65817.1| mce related protein [Nitrosococcus oceani AFC27]
Length = 145
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 28/108 (25%), Positives = 44/108 (40%), Gaps = 2/108 (1%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GLFV + L F +S + ++ ++ GL S V G+ +GR+V
Sbjct: 2 GLFVAAGLVAFFMLAMRVSNLSLVAQENTYSVVAEFQNIGGLKVRSPVTLAGVTIGRVVS 61
Query: 71 LFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ +D + + D L T+A+I T GL G YI L
Sbjct: 62 IQIDPQTYGAQVRMHIEAQYDY-LPEDTSASIYTSGLLGEQYIALEPG 108
>gi|292490487|ref|YP_003525926.1| ABC transporter periplasmic protein [Nitrosococcus halophilus Nc4]
gi|291579082|gb|ADE13539.1| Mammalian cell entry related domain protein [Nitrosococcus
halophilus Nc4]
Length = 155
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 48/119 (40%), Gaps = 3/119 (2%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ VGLFV + L F +S + +I ++ GL S V
Sbjct: 1 MRQSRTVELVVGLFVAAGLGALFMLAMKVSNLSLVAQEDTYSVIAKFQNIGGLKVRSPVT 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + +D + + K I L T+A+I T GL G YI L
Sbjct: 61 LAGVTIGRVAAIQIDSQTYE-AEVKMRIESRYDYLPEDTSASIYTAGLLGEQYIALEPG 118
>gi|227326639|ref|ZP_03830663.1| hypothetical protein PcarcW_04669 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 188
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 56/133 (42%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L F ++ + ++ GL + S +R
Sbjct: 1 MQTKKTEVWVGVFMLIALAAILFLCLKVADLKSIGNEPTYRLYATFDNIGGLKSRSPIRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD++ I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADISLDEKTY-LPRVAMDIQQRYDHIPDTSSLAIRTSGLLGEQYLALNIGFE 119
Query: 120 EKKTIFQIATERN 132
+++ I +
Sbjct: 120 DEEMGTAILKDGG 132
>gi|238789752|ref|ZP_04633534.1| hypothetical protein yfred0001_29020 [Yersinia frederiksenii ATCC
33641]
gi|238722111|gb|EEQ13769.1| hypothetical protein yfred0001_29020 [Yersinia frederiksenii ATCC
33641]
Length = 185
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ + F ++ I ++ GL ++S V+
Sbjct: 1 MQTKKSEVWVGVFILIAILAVIFLCLKVADIKSVGNQPTYRIYANFDNIGGLKSNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVAEITLDTQNYSP-RVAMDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERN 132
+ I +
Sbjct: 120 DPDMGTSILKDGG 132
>gi|87200856|ref|YP_498113.1| hypothetical protein Saro_2843 [Novosphingobium aromaticivorans DSM
12444]
gi|87136537|gb|ABD27279.1| Mammalian cell entry related protein [Novosphingobium
aromaticivorans DSM 12444]
Length = 319
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 43/305 (14%), Positives = 97/305 (31%), Gaps = 9/305 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ + VGL + +L + W++R NQ G + E I SVDGL+ S V F
Sbjct: 1 METRANHIWVGLVTLLLLAGTALLTVWIARINQ--GDLHEYDIFFKQSVDGLAKGSEVSF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI-----ELS 115
+G+P G++ + L + P + + P+ TTA+++ T + +
Sbjct: 59 SGVPSGQVKDIELWERDPEFVRVRIAVDKKVPILQGTTASLQGSFTGVSTIQLSGAVKGA 118
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ A + T + + + + R + + +K
Sbjct: 119 PPIDCPDENRRAACPEGVPVIPTKRSGLGEILSNAPLLLERLATLTERLTMVLSDKNQKS 178
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITDLITSLDKMIKA 233
+ ++N + ++ LA+ + + + Q + + + L+
Sbjct: 179 IENILSNTDRLTGNLADASPDVKRTLAELQATLRQANYTLASFEKLTNSADSMLNDEGNG 238
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ Q + + S+ T + + +
Sbjct: 239 LAQQLRKTLKSAQGAADELQGTLSEARPAARQLNERTLPAAEAAIRDLQATTRSLREVTD 298
Query: 294 SKETS 298
Sbjct: 299 RLNDQ 303
>gi|78485325|ref|YP_391250.1| hypothetical protein Tcr_0981 [Thiomicrospira crunogena XCL-2]
gi|78363611|gb|ABB41576.1| ATP-binding cassette (ABC) superfamily transporter, solute-binding
component [Thiomicrospira crunogena XCL-2]
Length = 158
Score = 94.2 bits (231), Expect = 4e-17, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 3/124 (2%)
Query: 1 MESKNY-YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + VG FV+ + +S I + ++ GL S V+
Sbjct: 1 MTRRKIIEIWVGAFVLLAMISLIMIALKVSNFQGLQEKPTYQINALFSNIGGLKVRSPVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+G+ VGR+ + +D+ + K I D L T+A+I T GL G YI L
Sbjct: 61 ISGVVVGRVSDISVDKVTY-QARVKMQIYKDYDELPLDTSASILTSGLLGDQYIGLEPGA 119
Query: 119 KEKK 122
+
Sbjct: 120 DDVY 123
>gi|284049031|ref|YP_003399370.1| Mammalian cell entry related domain protein [Acidaminococcus
fermentans DSM 20731]
gi|283953252|gb|ADB48055.1| Mammalian cell entry related domain protein [Acidaminococcus
fermentans DSM 20731]
Length = 417
Score = 93.8 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 34/301 (11%), Positives = 88/301 (29%), Gaps = 8/301 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
K VG + + + +L + + G ++ + V+GL + VRF G+
Sbjct: 2 KADEVKVGAVTLGGIVILALMLTFLGVFS-FAGRTYKLNVMF-DDVNGLKVGNEVRFAGV 59
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG++ + +D + + + ++ I G+ G ++ ++ +
Sbjct: 60 PVGKVDDIVVDG---SKVKVVMKMDEKQKIPRNSQFAIGMDGVMGTKFVTIAPPKIATGL 116
Query: 124 IFQIATERNQRA---MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+F+ + + S + + T +
Sbjct: 117 VFKAGETITGQQAGGIDKLMDSSGKVLDKLEVVVDAFSNVFGDKNVQKSMREGFVQTGEV 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A T ++ ++ T V S + + + +
Sbjct: 177 AKNMNDFTKALATMAQQNQGDIHTMVGQMKEMSIHMNSIMDKADADGATGQNVAAMAANM 236
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++ +++ T D++ET + + K D +L + +
Sbjct: 237 ADASKKLQNTAAALQNVVTDPQTQQDLKETIRHAKSTSVKADKILGVVTDAQVQADVLYN 296
Query: 301 L 301
Sbjct: 297 D 297
>gi|91205183|ref|YP_537538.1| ABC transporter substrate binding protein [Rickettsia bellii
RML369-C]
gi|91068727|gb|ABE04449.1| ABC transporter substrate binding protein [Rickettsia bellii
RML369-C]
Length = 149
Score = 93.8 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G F V I+ F F + + S+ + ++ S +G+S S V
Sbjct: 1 MKQNIIETIIG-FAVLIIAFLFLIFAYKTGSSMTNAKGYQLTASF-QSAEGISVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI +G + +FLD + + + + + A + T GL G YI +
Sbjct: 59 SGIKIGNVKKIFLDPTSY-FATVYLNVNENVKIPKDSKAQVVTSGLLGGKYIAIVPGNDN 117
Query: 121 KK 122
Sbjct: 118 DY 119
>gi|118475119|ref|YP_891670.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter fetus subsp. fetus 82-40]
gi|28974223|gb|AAO64224.1| putative ABC transport system periplasmic substrate-binding protein
Cf0018 [Campylobacter fetus]
gi|118414345|gb|ABK82765.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter fetus subsp. fetus 82-40]
Length = 304
Score = 93.8 bits (230), Expect = 4e-17, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 94/303 (31%), Gaps = 1/303 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+KN Y GLF +L F + +++ +G I +G+ DS VRF
Sbjct: 1 MENKNSYFIAGLFFCIVLAMLTFFVLYMNIKGN-EGETRYYYIETKELPNGIKNDSQVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P G + ++ K ++ D P+ + A + QG++GI YI +S
Sbjct: 60 IGVPAGIVKDIYFSDPKSATIEIKMSLKKDLPIKRDSVAVVEVQGISGIAYINISKGSDS 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + G + + + + + N+ + +
Sbjct: 120 AEVFSPNDKPSIKMGQGLLAKIGDSAINLGSRIDASLSKIDRALSDENLNNLSNSIASLN 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ V S+ + V + S F + + K +
Sbjct: 180 TILSNLAKVSNEQNSNNINKLLENSVAISNRVSAIKFEELNKNAADFLNIAKKSAKSFED 239
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ S+ + T+ +T + ++ + L
Sbjct: 240 TQTLLMSKLSSGEYDFKSFLTPTLSATNDTLLQLDSLIMELKNTLFRLEDNPYEFFFKDT 299
Query: 301 LEN 303
+
Sbjct: 300 SGD 302
>gi|325983136|ref|YP_004295538.1| Mammalian cell entry related domain-containing protein
[Nitrosomonas sp. AL212]
gi|325532655|gb|ADZ27376.1| Mammalian cell entry related domain protein [Nitrosomonas sp.
AL212]
Length = 155
Score = 93.8 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 45/117 (38%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV + + N Y+ + VI ++ GL + V+
Sbjct: 1 MQRTTMDLWVGLFVVMGIIALMILSLKVGNLNVYNPSQSYVITGNFENIGGLKIRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + E + + T A+I T GL G YI L+
Sbjct: 61 AGVVVGRVTNIQFSTETYDAV-VTMSMDARFQFPKDTFASILTSGLLGEQYIGLAAG 116
>gi|242310200|ref|ZP_04809355.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
gi|239523497|gb|EEQ63363.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
Length = 265
Score = 93.8 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 57/166 (34%), Gaps = 3/166 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ Y +G F V +L I W+ + ++ E I G+ ++ V++
Sbjct: 1 MEARLNYVLLGSFFVIVLLALAGFILWMGKYDRNLSEYREYYIYNKELPAGIRIETPVKY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + L + ++ + L + + QG+ G + L
Sbjct: 61 LGLPVGFVKQYELSGD---KVEIIIWVKKEIVLNEGSKVVVERQGITGGGFFALIQGEGA 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Q A + I + + E + ++ +
Sbjct: 118 PFGDSQKAILGFKENWIEQVGTKAEKVMGQLEVSLERFNRLLSEQN 163
>gi|183980444|ref|YP_001848735.1| MCE-family protein Mce1B [Mycobacterium marinum M]
gi|183173770|gb|ACC38880.1| MCE-family protein Mce1B [Mycobacterium marinum M]
Length = 346
Score = 93.8 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 45/128 (35%), Gaps = 4/128 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+F + ++ FS I + + GL VR
Sbjct: 1 MKITGTAIRLGIFSLVLMLFSVMIIIVFGQIR--FDRTYAYSAEFS-NASGLRPGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G++ + L + + PLY ST+A IR L G Y+EL +
Sbjct: 58 SGVEIGKVKSVSLI-DGGKRVRVNFDVDRSVPLYQSTSAQIRYLDLIGNRYLELKRGEGD 116
Query: 121 KKTIFQIA 128
Sbjct: 117 GSDRIMPP 124
>gi|85860997|ref|YP_463199.1| paraquat-inducible protein B [Syntrophus aciditrophicus SB]
gi|85724088|gb|ABC79031.1| paraquat-inducible protein B [Syntrophus aciditrophicus SB]
Length = 328
Score = 93.8 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 4/94 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K T +G FVV + ++ L S ++ + ++ GSV GL+ S V F
Sbjct: 1 MSGKENKTLIGAFVVGAIAILVLAVLVLG-SGKFLSRSQKYVLFFDGSVKGLNVGSPVTF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSL---AKALIRPDT 91
G+ +G + + + + +L + P+
Sbjct: 60 RGVKIGEVTDISVVIDQKQRALRIPVLIRLDPEL 93
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/203 (11%), Positives = 68/203 (33%), Gaps = 4/203 (1%)
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + + +F ++ + T Q++ + + ++
Sbjct: 122 QNFVTGQLMVALDFFPNAPPRYVGMKKQYAEIPTIPTALQELQRTVEHLPLREIVVSLNS 181
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
++ I +++ + + + + E I + SQ + +
Sbjct: 182 AVQGIDRIVNSVDTRKTTQTLEAALKDIQTLVRHIDERIEPLVAGLSQTSGAAEETL--V 239
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG--LNDIQNLVRKLQE 417
+ + S+ KD + + + + T E + LQ +S + ++ +R+L
Sbjct: 240 ESKETAASVRKDMKELVASTKTTLESAQAVLKQSEQTLQAYSGDSPLVVEMNKTLRELGA 299
Query: 418 TVNHFDDCLNNFERNPQDIVWGR 440
T + ER+P+ ++ G+
Sbjct: 300 TSRSLRHLSDYLERHPESLLRGK 322
>gi|152996433|ref|YP_001341268.1| hypothetical protein Mmwyl1_2411 [Marinomonas sp. MWYL1]
gi|150837357|gb|ABR71333.1| Mammalian cell entry related domain protein [Marinomonas sp. MWYL1]
Length = 154
Score = 93.8 bits (230), Expect = 5e-17, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 2/123 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK VG F++ + + +S ++ + GL+ + V
Sbjct: 1 MRSKRSELLVGCFIILGVVALVYLAVQVSGLAFSSKKDTYQVVARFDDIAGLTNRAKVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG + + D++ +L I D + ++ + T GL G Y+ +S
Sbjct: 61 AGVAVGNVESITFDKKLY-MALVTMNIDSDVNNIPTDSSIAVLTSGLLGEKYLGISIGAD 119
Query: 120 EKK 122
++
Sbjct: 120 DEM 122
>gi|282898550|ref|ZP_06306538.1| conserved hypothetical protein [Cylindrospermopsis raciborskii
CS-505]
gi|281196418|gb|EFA71327.1| conserved hypothetical protein [Cylindrospermopsis raciborskii
CS-505]
Length = 470
Score = 93.8 bits (230), Expect = 6e-17, Method: Composition-based stats.
Identities = 52/442 (11%), Positives = 128/442 (28%), Gaps = 31/442 (7%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGL + L WL+R +VI+ G+ VR+ G+ VG I
Sbjct: 15 VGLIFLIGLGAFGVIFLWLNRVTP-GRSSYQVIVEF-ADAGGMQKGDPVRYRGVKVGSIA 72
Query: 70 GLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ PN + I P+ + + GL + ++++ L T+
Sbjct: 73 RMT---TKPNAVEVELEINDPNLLIPADSRIEANQSGLISESIVDITPLGD--VTLDPNT 127
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + + I + ST
Sbjct: 128 AKPLDKDCNPGLIICHQSGKLRGQIGTSVDRLIRQSSDFADRYGNQQFYDNINRLLITST 187
Query: 189 VLANNISHIDKMMHTTQVTPH-----SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
A +I+ + + + + SD+ T T+ +T+ K A
Sbjct: 188 DAAASIAKLSRELQIASRSFQGEVGKFSDTAVTIQRATNELTATTKQTAAQINTTAGDFS 247
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + D + + T E K+ ++ S + L+N
Sbjct: 248 TAAKQAGKLINNLDDLLTTNRSALVSTLNNINETSNKLRQTVNALSPAVTRLTQGDILKN 307
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ ++N + ++++ + + I ++ + + ++ S ++ ++
Sbjct: 308 LEILSANAAEASISLKDASKTLADPKN-IVLLQQTLDAARVTFENTQKITSDLDELTGDP 366
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ ++ ++ + L+ I+ + + Q
Sbjct: 367 KFRQNLLQLVNGLNKLLSSTGDMQEQTK---------VALTLDSIKLSINQGQSKSETTS 417
Query: 424 DC--------LNNFERNPQDIV 437
D E+ +V
Sbjct: 418 DLGVSNHGVEAEKLEKQENRVV 439
>gi|238019667|ref|ZP_04600093.1| hypothetical protein VEIDISOL_01541 [Veillonella dispar ATCC 17748]
gi|237863708|gb|EEP64998.1| hypothetical protein VEIDISOL_01541 [Veillonella dispar ATCC 17748]
Length = 419
Score = 93.5 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 37/345 (10%), Positives = 99/345 (28%), Gaps = 5/345 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F + + I ++ R + + P + V+GL + V+++G+
Sbjct: 4 TTEAKVGAFTIIGIALFIAGILFVGRIDIWAKPQMTITGDFAQ-VNGLKNGNQVKYSGVA 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G + + + + K + T + +T T+ + G G +I++S + +
Sbjct: 63 IGNVSDIEITPHG---VVVKMKLDEKTQIPSDSTFTLGSDGFLGDKFIQISPGQSKVFLK 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + E + I++ +T
Sbjct: 120 DGDSVKGEGADAMDKAMQSAQKLMDGTEKMLQSINNIIGDPATQNALKHSLQSTATMADN 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ Q + + +T+L + D++ +
Sbjct: 180 AVAITQNMADVTAQLNQAAQQFNADGNAGNDMRAILTNLKQTTDRVDNMARSMESTVTDP 239
Query: 245 N-IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ + G +D + S K + + L N
Sbjct: 240 KAQENIKETLHNTAQISARINKLMGGKAYQTDASGNVVDGNNVEKKSSTKVEPSVDLLYN 299
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
D + + A + + + + + + S K
Sbjct: 300 TTDDEFRINGRVRAYNDKGMAELGLSNIGDGTKFDLNAGRFISSK 344
>gi|37523684|ref|NP_927061.1| hypothetical protein glr4115 [Gloeobacter violaceus PCC 7421]
gi|35214689|dbj|BAC92056.1| glr4115 [Gloeobacter violaceus PCC 7421]
Length = 380
Score = 93.5 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/420 (10%), Positives = 118/420 (28%), Gaps = 43/420 (10%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + VGL ++ + WLS + I +GL+ + VR
Sbjct: 1 MNRRGIREGLVGLLILVGVGIFVGLYLWLSG--GFRQGGYRFTITF-RDANGLNVGAPVR 57
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG++ + + RPD + + + GL G T++E+
Sbjct: 58 LRGVRVGQVQA-TIPGISSVKADVLID-RPDVFIPKDSQFVVSQSGLIGETFVEIFPSDT 115
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
N+R + + S+ + +
Sbjct: 116 AVVPPNTTVETLNERCEKSVASEPLVCPQSSVIGRTPPRFQELVRSLDALATRLDQ---- 171
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
D + T ++D+ ++ + ++V
Sbjct: 172 ---------------DFFDSLQTTVVKFGQTADNLSSLSRTAAKDFDALAETARAASREV 216
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q + +++ + +T ++ L S + +
Sbjct: 217 PAFGRAAQALEKTLLDVDIILLDNRASLSQTLANLNRASAEVSQLTGQLSGSITPERLDQ 276
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
+ N ++ +N+RS AI + + ++ + + + ++ + ++ +
Sbjct: 277 IVSNTNEAVANLRSLSVAISDPAT--------VASLRSTLDSARATLDNIKKITTDLDEL 328
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
+ + R + + + S + S D ++ + + +T
Sbjct: 329 TGDPQFR----------TNLRRLIDGLGNLVSSEPGDPNGSSVFANADYRDGLAGVADTA 378
>gi|327540667|gb|EGF27239.1| protein containing Mammalian cell entry related domain
[Rhodopirellula baltica WH47]
Length = 510
Score = 93.5 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 42/430 (9%), Positives = 116/430 (26%), Gaps = 29/430 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+ V++ + + + + + P S DG++ ++ V
Sbjct: 1 MDDSRLRFGVGVLVIAAIGIAVILTFLFGAFPAILNREYTLNVYFP-SADGININAPVYR 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +GR+ ++L +E + + I L
Sbjct: 60 DGVKIGRVDDIWLQEE--GGVRLILSMDESVSMTHQYIPQIGIGSLITGDSKLEFRKADR 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + + +Y E+ I + ++
Sbjct: 118 RELVGLFDDNPDLIEQPYTDGELFDYG-KKLEDPFSLIFGMEDELVSTFRSVRGAGDAIQ 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
I ++ + I ++ + + S+ +
Sbjct: 177 DIGSDIKGLVRDVRGVIG--------LSPTAPVSSPSVPMGGFPQSMAPAPAWARPIVLA 228
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
L +S ++ + + + + + ++
Sbjct: 229 SHLSPQDGASKGVIQQVAMQQTLPQQGMQQPTLPPQGFTPPQGFGTQLGTPLPAQPGMQT 288
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
I + ++ + + II N++ ++ E+ +
Sbjct: 289 PPTITQLAGDASQAVKEFSFLVRDIRSIIGDPQIQRNVSDTVDRLPGVLDEVKVTLE--- 345
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
DA+ TFR+ + +G ++ N++Q+ +R ++ T
Sbjct: 346 ----------DARETFETFRE----VGGQFEQVGIVAEDAVSQTANELQSTLRSVRSTAK 391
Query: 421 HFDDCLNNFE 430
F+ N E
Sbjct: 392 SFEGTAENIE 401
>gi|51597809|ref|YP_072000.1| hypothetical protein YPTB3517 [Yersinia pseudotuberculosis IP
32953]
gi|153948335|ref|YP_001399443.1| mce family protein [Yersinia pseudotuberculosis IP 31758]
gi|170022765|ref|YP_001719270.1| hypothetical protein YPK_0514 [Yersinia pseudotuberculosis YPIII]
gi|51591091|emb|CAH22755.1| Conserved putative membrane protein [Yersinia pseudotuberculosis IP
32953]
gi|152959830|gb|ABS47291.1| mce family protein [Yersinia pseudotuberculosis IP 31758]
gi|169749299|gb|ACA66817.1| Mammalian cell entry related domain protein [Yersinia
pseudotuberculosis YPIII]
Length = 185
Score = 93.5 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ + F ++ I ++ GL S V+
Sbjct: 1 MQTKKSEVWVGMFILIAILAVVFLCLKVADIKSVGNQPTYRIYANFDNIGGLKNHSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVAEITLDTKNYTP-RVAIDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERNQRA 135
+ + I +
Sbjct: 120 DPEMGTSILKDGGTIQ 135
>gi|91786697|ref|YP_547649.1| hypothetical protein Bpro_0795 [Polaromonas sp. JS666]
gi|91695922|gb|ABE42751.1| Mammalian cell entry related protein [Polaromonas sp. JS666]
Length = 168
Score = 93.5 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 41/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + + + ++ GL ++V+
Sbjct: 1 MQRSKNDVWVGLFVLIGGAAMLFLALKSANLLTLSFDTSYRVTAKFDNIGGLKPRAAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + ++ I T GL G YI +
Sbjct: 61 AGVVVGRVENITFD-DKSYQASVHLAMESRYAFPKDSSLKILTSGLLGEQYIGVEAG 116
>gi|329120838|ref|ZP_08249498.1| ABC superfamily ATP binding cassette transporter, binding protein
[Neisseria bacilliformis ATCC BAA-1200]
gi|327459710|gb|EGF06051.1| ABC superfamily ATP binding cassette transporter, binding protein
[Neisseria bacilliformis ATCC BAA-1200]
Length = 166
Score = 93.5 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 5/132 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD---GPMAEVIIRIPGSVDGLSTDSS 57
M+ VGLFV++ F ++ + V + GL T +
Sbjct: 1 MKRNILEFWVGLFVLAGAAALGFLSLRVAGGGGFGGGASQGYTVYAEFSD-IGGLKTQAP 59
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
++ +G+ VGR+ + LD + + + +A I T GL G YI L
Sbjct: 60 IKASGVLVGRVQSITLDPQTYR-AKVALQLDKQYQFSSDVSAQILTSGLLGEQYIGLMQG 118
Query: 118 RKEKKTIFQIAT 129
+
Sbjct: 119 GDPENLAPGDTI 130
>gi|32474657|ref|NP_867651.1| hypothetical protein RB7131 [Rhodopirellula baltica SH 1]
gi|32445196|emb|CAD75198.1| hypothetical protein RB7131 [Rhodopirellula baltica SH 1]
Length = 510
Score = 93.5 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 41/430 (9%), Positives = 115/430 (26%), Gaps = 29/430 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+ V++ + + + + + P S DG++ ++ V
Sbjct: 1 MDDSRLRFGVGVLVIAAIGIAVILTFLFGAFPAILNREYTLNVYFP-SADGININAPVYR 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +GR+ ++L +E + + I L
Sbjct: 60 DGVKIGRVDDIWLQEE--GGVRLILSMDESVSMTHQYIPQIGIGSLITGDSKLEFRKADR 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + + +Y E+ I + ++
Sbjct: 118 RELVGLFDDNPDLIEQPYTDGELFDYG-KKLEDPFSLIFGMEDELVSTFRSVRGAGDAIQ 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
I ++ + I ++ + + S+ +
Sbjct: 177 DIGSDIKGLVRDVRGVIG--------LSPTAPVSSPSVPMGGFPQSMAPAPAWARPIVLA 228
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+S ++ + + + + + ++
Sbjct: 229 SHSSRQDGASKGVIQQVAMQQTLPQQGMQQPTLPPQGFTPPQGFGTQLGTPLPAQPGMQT 288
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
I + ++ + + II N++ ++ E+ +
Sbjct: 289 PPTITQLAGDASQAVKEFSFLVRDIRSIIGDPQIQRNVSDTVDRLPGVLDEVKVTLE--- 345
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
DA+ TFR+ + +G ++ N++Q+ +R ++ T
Sbjct: 346 ----------DARETFETFRE----VGGQFEQVGIVAEDAVSQTANELQSTLRSVRSTAK 391
Query: 421 HFDDCLNNFE 430
F+ N E
Sbjct: 392 SFEGTAENIE 401
>gi|108809721|ref|YP_653637.1| hypothetical protein YPA_3730 [Yersinia pestis Antiqua]
gi|108813615|ref|YP_649382.1| hypothetical protein YPN_3455 [Yersinia pestis Nepal516]
gi|145597640|ref|YP_001161716.1| hypothetical protein YPDSF_0324 [Yersinia pestis Pestoides F]
gi|153997348|ref|ZP_02022448.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162420534|ref|YP_001605690.1| hypothetical protein YpAngola_A1144 [Yersinia pestis Angola]
gi|165928106|ref|ZP_02223938.1| mce family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165937492|ref|ZP_02226055.1| mce family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|166011288|ref|ZP_02232186.1| mce family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211980|ref|ZP_02238015.1| mce family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167400514|ref|ZP_02306023.1| mce family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167420732|ref|ZP_02312485.1| mce family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167426980|ref|ZP_02318733.1| mce family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470183|ref|ZP_02334887.1| mce family protein [Yersinia pestis FV-1]
gi|218930585|ref|YP_002348460.1| hypothetical protein YPO3573 [Yersinia pestis CO92]
gi|229836871|ref|ZP_04457036.1| predicted ABC-type organic solvent transporter [Yersinia pestis
Pestoides A]
gi|229839229|ref|ZP_04459388.1| predicted ABC-type organic solvent transporter [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229899794|ref|ZP_04514935.1| predicted ABC-type organic solvent transporter [Yersinia pestis
biovar Orientalis str. India 195]
gi|229904109|ref|ZP_04519220.1| predicted ABC-type organic solvent transporter [Yersinia pestis
Nepal516]
gi|270488544|ref|ZP_06205618.1| Mce family protein [Yersinia pestis KIM D27]
gi|294505305|ref|YP_003569367.1| hypothetical protein YPZ3_3196 [Yersinia pestis Z176003]
gi|108777263|gb|ABG19782.1| membrane protein [Yersinia pestis Nepal516]
gi|108781634|gb|ABG15692.1| putative membrane protein [Yersinia pestis Antiqua]
gi|115349196|emb|CAL22161.1| putative membrane protein [Yersinia pestis CO92]
gi|145209336|gb|ABP38743.1| membrane protein [Yersinia pestis Pestoides F]
gi|149288985|gb|EDM39065.1| putative membrane protein [Yersinia pestis CA88-4125]
gi|162353349|gb|ABX87297.1| mce family protein [Yersinia pestis Angola]
gi|165914597|gb|EDR33211.1| mce family protein [Yersinia pestis biovar Orientalis str. IP275]
gi|165919880|gb|EDR37181.1| mce family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989672|gb|EDR41973.1| mce family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166206726|gb|EDR51206.1| mce family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|166961538|gb|EDR57559.1| mce family protein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167049882|gb|EDR61290.1| mce family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|167054020|gb|EDR63848.1| mce family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229678227|gb|EEO74332.1| predicted ABC-type organic solvent transporter [Yersinia pestis
Nepal516]
gi|229687286|gb|EEO79361.1| predicted ABC-type organic solvent transporter [Yersinia pestis
biovar Orientalis str. India 195]
gi|229695595|gb|EEO85642.1| predicted ABC-type organic solvent transporter [Yersinia pestis
biovar Orientalis str. PEXU2]
gi|229705814|gb|EEO91823.1| predicted ABC-type organic solvent transporter [Yersinia pestis
Pestoides A]
gi|262363368|gb|ACY60089.1| hypothetical protein YPD4_3185 [Yersinia pestis D106004]
gi|262367254|gb|ACY63811.1| hypothetical protein YPD8_3141 [Yersinia pestis D182038]
gi|270337048|gb|EFA47825.1| Mce family protein [Yersinia pestis KIM D27]
gi|294355764|gb|ADE66105.1| hypothetical protein YPZ3_3196 [Yersinia pestis Z176003]
gi|320017115|gb|ADW00687.1| putative ABC-type organic solvent transporter [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 185
Score = 93.5 bits (229), Expect = 6e-17, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ + F ++ I ++ GL S V+
Sbjct: 1 MQTKKSEVWVGMFILIAILAVIFLCLKVADIKSVGNQPTYRIYANFDNIGGLKNHSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVAEITLDTKNYTP-RVAIDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERNQRA 135
+ + I +
Sbjct: 120 DPEMGTSILKDGGTIQ 135
>gi|223040189|ref|ZP_03610468.1| mce related protein [Campylobacter rectus RM3267]
gi|222878550|gb|EEF13652.1| mce related protein [Campylobacter rectus RM3267]
Length = 310
Score = 93.5 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 30/117 (25%), Positives = 52/117 (44%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K YT +GLF V ++ + +WL + I+ G+ DS+V+F
Sbjct: 1 MGNKINYTLIGLFFVLVVSALGIAAWWLGGYGKKADDYRSYFIKTTSLPSGIKKDSTVKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ G + + E + +R D P+ +TA+ QG+ GI Y+ +S
Sbjct: 61 IGVDAGSVKDIRFADEKEALIELELSVRKDIPIRTDSTASAEIQGITGIGYLNISRG 117
>gi|238796192|ref|ZP_04639702.1| hypothetical protein ymoll0001_34480 [Yersinia mollaretii ATCC
43969]
gi|238719885|gb|EEQ11691.1| hypothetical protein ymoll0001_34480 [Yersinia mollaretii ATCC
43969]
Length = 207
Score = 93.5 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ + F ++ I ++ GL T+S V+
Sbjct: 1 MQTKRSEVWVGAFILIAILAVIFLCLQVADIKSVGNQPTYRIYANFDNIGGLKTNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVAYITLDTQNYSP-RVAIDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERN 132
+ I +
Sbjct: 120 DPDMGTSILKDGG 132
>gi|116749876|ref|YP_846563.1| hypothetical protein Sfum_2448 [Syntrophobacter fumaroxidans MPOB]
gi|116698940|gb|ABK18128.1| Mammalian cell entry related domain protein [Syntrophobacter
fumaroxidans MPOB]
Length = 333
Score = 93.5 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 1/133 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGL ++ I+ +S + + P DG++ S V +
Sbjct: 1 MQVFRSEIRVGLLILVSFVVLMAGIFAVSDLRSLWYKKKTIELLFPY-ADGITKGSPVWY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + Q + I PD + + A IR G+ G Y+E+S +
Sbjct: 60 AGLEVGEVSNIRIAQGASDRIAVTVTISPDARVRKDSRADIRNLGMMGAKYVEISPGSPD 119
Query: 121 KKTIFQIATERNQ 133
+ + T +
Sbjct: 120 AELLGPGETLEGK 132
>gi|50119257|ref|YP_048424.1| hypothetical protein ECA0297 [Pectobacterium atrosepticum SCRI1043]
gi|49609783|emb|CAG73217.1| putative exported protein [Pectobacterium atrosepticum SCRI1043]
Length = 188
Score = 93.5 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L F ++ + ++ GL S +R
Sbjct: 1 MQTKKTEVWVGVFMLIALAAILFLCLKVADLKSIGNEPTYRLYATFDNIGGLKARSPIRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADISLDEKTY-LPRVAMDIQQRYDHIPDTSSLAIRTSGLLGEQYLALNMGFE 119
Query: 120 EKKTIFQIATERN 132
++ I +
Sbjct: 120 DEDMGTTILKDSG 132
>gi|253572013|ref|ZP_04849417.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251838193|gb|EES66280.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 297
Score = 93.5 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 92/290 (31%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIVALCVLVYGINWLKGIHMFQPSSYFY--AKFQNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + + D P + + + + + + ++A + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIEYDYVNPGNVIVEVELDTELRIPKGSSAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K T + + + + + ++
Sbjct: 119 EKYAI------GDTIPGTLNNGMMESVAKLMPQIESMLPKLDSILTSLNNIVGDKSIPSM 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T +S K + + + + + + +L ++ + QKV+
Sbjct: 173 LHSIETTTANLAVVSSQMKGLMSKDIPQLTGKLNTIGDNFVAISGNLKEVDYSAIFQKVD 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ + + + +D + LL D +
Sbjct: 233 ATLANVKMITEKLNSKDNTIGLLFNDP-ALYNNLNATTENAASLLEDLKA 281
>gi|86608565|ref|YP_477327.1| mce related protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86557107|gb|ABD02064.1| mce related protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 407
Score = 93.5 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/430 (10%), Positives = 127/430 (29%), Gaps = 64/430 (14%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ +VGL +++ W+ ++ + + +V GL+ SSVR
Sbjct: 1 MRSRAVREGAVGLLILAGALGFAGLFLWIYNL-RFGSRGFQFTVTYT-NVVGLTEGSSVR 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + + + I + + + GL G T ++ +
Sbjct: 59 LRGVTIGRVERIVPQP---SQVEVQVTIDQPLVIPRDSLFLTKQTGLVGETVMD-ILPQG 114
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + + + I + + + L T
Sbjct: 115 RGQAATGSPLAADCDSSQIICDGDVVEGKPGVDFGQLLIRLDQLLTRINDDELFDTLNAT 174
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + ++ +A+ +++ +
Sbjct: 175 LEGLTRVANSVADLSETVEERV-------------------------------------- 196
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
L + F ++ + + VR T ++ Q + L+ + + +
Sbjct: 197 -AALRTEDLDLLQFTTAATAIQDAAGAVRGTARSLQAAADQFTALVDQNRTSLNAA---- 251
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
++ + + + A+ + I + + +++ A+ + I
Sbjct: 252 -----LENIQQVSADLQAMSSAVRPLVTDPQLQADVRQILAEVRAAAENVAQATEDLQQI 306
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
+A + ++ + + R T + + + I + R ++E V
Sbjct: 307 AASLNDPGTLATLRQTLDSARITFQNMQKITADIDELTGD---------PQFRRGIRELV 357
Query: 420 NHFDDCLNNF 429
+ +++
Sbjct: 358 LGLSNLVSSV 367
>gi|255011255|ref|ZP_05283381.1| hypothetical protein Bfra3_19086 [Bacteroides fragilis 3_1_12]
gi|313149066|ref|ZP_07811259.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
gi|313137833|gb|EFR55193.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
Length = 297
Score = 93.1 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 92/283 (32%), Gaps = 5/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ ++ L F I +L N + + +V+GL+ S V
Sbjct: 1 MKLITKEVRIGIAGIAALCLLVFGINYLKGINMFKPASYFYVK--FHNVNGLAQSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + + D P + + + + D + ++A + + + G+ L
Sbjct: 59 DGVRVGIVRDIAYDYNQPENVIVEVEVDTDLRIPKGSSAELVPELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH---IQKIIENIEKPLT 177
++ + + + + + I S Q I +
Sbjct: 119 ERYMVGDTIPGTLNNGMMEKVAAMMPAVEKMLPKLDSILTSLNTIMADQSIPATLHSIEK 178
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
TT T + + I ++ + + D T+ K+ +
Sbjct: 179 TTANLEVTSRQLKVLMNNDIPQLTGKLNTIGDNFIVISGNLKEIDYATTFKKIDATLSNV 238
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
K+ N + ++ + + Q+ N ++ + E ++
Sbjct: 239 KMLTEKLNSKDNTVGLLLNDPQLYNNLNQTTINAASLLEDLKE 281
>gi|29347552|ref|NP_811055.1| hypothetical protein BT_2142 [Bacteroides thetaiotaomicron
VPI-5482]
gi|298383756|ref|ZP_06993317.1| mce related protein [Bacteroides sp. 1_1_14]
gi|29339452|gb|AAO77249.1| conserved hypothetical protein, with a conserved domain
[Bacteroides thetaiotaomicron VPI-5482]
gi|298263360|gb|EFI06223.1| mce related protein [Bacteroides sp. 1_1_14]
Length = 297
Score = 93.1 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 91/290 (31%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIVALCVLVYGINWLKGIHMFQPSSYFY--AKFQNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + + D P + + + + + + ++A + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIEYDYVNPGNVIVEVELDTELRIPKGSSAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K T + + + + + +
Sbjct: 119 EKYAI------GDTIPGTLNNGMMESVAKLMPQIESMLPKLDSILTSLNNIVGDKSIPST 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T +S K + + + + + + +L ++ + QKV+
Sbjct: 173 LHSIETTTANLAVVSSQMKGLMSKDIPQLTGKLNTIGDNFVAISGNLKEVDYSAIFQKVD 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ + + + +D + LL D +
Sbjct: 233 ATLANVKMITEKLNSKDNTIGLLFNDP-ALYNNLNATTENAASLLEDLKA 281
>gi|317050886|ref|YP_004112002.1| mammalian cell entry related domain-containing protein
[Desulfurispirillum indicum S5]
gi|316945970|gb|ADU65446.1| Mammalian cell entry related domain protein [Desulfurispirillum
indicum S5]
Length = 523
Score = 93.1 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 50/358 (13%), Positives = 118/358 (32%), Gaps = 11/358 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VGL V+ ++ L V V GL+ + V+
Sbjct: 1 MNITA-EAKVGLLVIVAFALLTYASVQLGDLRLDGDNYYAVEFAF-EDVAGLNRGARVKM 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G + + L+ + A + P+ + A I T+G+ G Y+ + +
Sbjct: 59 SGVSIGSVESILLE---NGKVIVSASVERKYPVAENAPARILTEGVLGEKYLSIDHVPGA 115
Query: 121 KKTIFQIA-----TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + R + AT + +S + S + + I E I
Sbjct: 116 RAFLGDGQRSQHFNSREGTEDLMATLGKVAADVSQITENLRTSIGSPQTNENINEMIFYL 175
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + ++ N +D + H T+ ++ +++ N + + + L + ++
Sbjct: 176 RELSFNLSQIVAANQENLNRTLDNVAHITETLREITTRNEHNINALIENMEVLTRSLRQQ 235
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ ++ + F + + D+R TT F ++ + S +
Sbjct: 236 TPEVMSSARSAFDSADGAFGELHGILAENRADIRTTTHNFGQLSGDLSTTSRHLSEITEK 295
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
T +T + S+ A ++ +I + T + S + +
Sbjct: 296 INTGDGTLGKLVNTDELHESLLAASRGIEEMTGMIGGLRTDITVRSEFLTEQSENRGI 353
>gi|157826201|ref|YP_001493921.1| ABC transporter substrate binding protein [Rickettsia akari str.
Hartford]
gi|157800159|gb|ABV75413.1| ABC transporter substrate binding protein [Rickettsia akari str.
Hartford]
Length = 149
Score = 93.1 bits (228), Expect = 7e-17, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G V+ + F + + S+ + +V + S +G++ S V
Sbjct: 1 MKQNIIETIIGCIVLI-IALLFLIFAYNTGSSITNSKGYQVTVNF-QSAEGIAVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+GI +G + + LD + ++ I D + + A + T+GL G YI +
Sbjct: 59 SGIKIGIVKKITLDPKSF-YASVYLNINDDVKIPKDSKAQVVTRGLLGGKYISIVPGND 116
>gi|74316267|ref|YP_314007.1| ABC-type transport system periplasmic component [Thiobacillus
denitrificans ATCC 25259]
gi|74055762|gb|AAZ96202.1| ABC-type transport system periplasmic component [Thiobacillus
denitrificans ATCC 25259]
Length = 315
Score = 93.1 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 48/301 (15%), Positives = 102/301 (33%), Gaps = 2/301 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ YT VG V+++L +I WL+ + I S+DGL+ S+V+
Sbjct: 1 METEGRYTLVGSLVLAVLASMTLAIVWLAGGADKIAYQSYTIYFRHQSLDGLAVGSAVKM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG + G A I D P++ A I+ + GI +E+ +
Sbjct: 61 RGIKVGVVEGFRFADGDDEAVRVTARIDEDVPVHAGAAAYIKRNLVTGIAAVEIDNGPGK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + ++ + + + ++ ++ T+
Sbjct: 121 GPLLSEPPAGERYPVIAEGSSDLDKVATAVSKLAVSGAQVLDKMNTLLSDENQRSVSRTL 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+ +S LA N +D + + + + + +I T + I +
Sbjct: 181 ANLNELSGHLAANKQSLDAAVQGIR--DAADEFRFAGASINQAATRAEGSITVVGENAQA 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I E ++ H T V + + ++ +
Sbjct: 239 AITEARDAIQKLERDATQISDRLEHFTETGTLELTNVSRDVRTSADTLTTTGQRLSNPRG 298
Query: 301 L 301
+
Sbjct: 299 I 299
>gi|313894614|ref|ZP_07828177.1| virulence factor Mce family protein [Veillonella sp. oral taxon 158
str. F0412]
gi|313440804|gb|EFR59233.1| virulence factor Mce family protein [Veillonella sp. oral taxon 158
str. F0412]
Length = 419
Score = 93.1 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/345 (11%), Positives = 101/345 (29%), Gaps = 5/345 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F + + I ++ R + + P + V+GL + V+F+G+
Sbjct: 4 TTEAKVGAFTIIGIALFIAGILFVGRIDIWAKPQMTITGDFAQ-VNGLKNGNQVKFSGVA 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G + + + P + K + T + + T+ + G G +I++S + +
Sbjct: 63 IGSVSDIEI---TPRGVVVKMKLDEKTQIPSDSIFTLGSDGFLGDKFIQISPGQSKVYLQ 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + E + I+ +T +
Sbjct: 120 DGDSVKGEGVDAMEKAMQSAQKLMDGTEKMLQSINSIIGDPATQNALKHSLQSTAVMADN 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ Q + + +T+L + D++ +
Sbjct: 180 AVAITENMANVTAQLNQAAQQFNADGNAGNDMRAILTNLKQTTDRVDNMARSMESTVTDP 239
Query: 245 NIQ-VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
Q ++ + G ++ ++ S K + + L N
Sbjct: 240 KAQANIQETLHNTAQISARINKLMGGKAYRTDANGNVVEVGTTEKKSSSKVEPSVDMLYN 299
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
D+ + + A + + + + + + S K
Sbjct: 300 TTDNEFRINGRLRAFNDKGMAEIGLSNIGDDTKFDLNAGKFISSK 344
>gi|312898373|ref|ZP_07757763.1| virulence factor Mce family protein [Megasphaera micronuciformis
F0359]
gi|310620292|gb|EFQ03862.1| virulence factor Mce family protein [Megasphaera micronuciformis
F0359]
Length = 411
Score = 93.1 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 99/281 (35%), Gaps = 9/281 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ VG+ V + FF + LS ++ + V + +GL ++VR+
Sbjct: 1 MKNMTAEVKVGIMTVVGVLLLFFVVVGLSHADLFRSSGLTVHVAFSD-ANGLQAGNTVRY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + ++ ++ T + + A I T GL G + ++ +
Sbjct: 60 VGVNVGKVESVTAGKDG---VEVTLKLKKGTEIPKDSKAVITTDGLMGEKLVSITPGQDT 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T + + + N N K +S +K + +
Sbjct: 117 QHLVTDGGTLQGDKVKSVDDVMDNANKLLNNVNDMMKNVNSVIGDEKTQGAMRGSIQNIA 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ +LA N ++ +M + +++ + +
Sbjct: 177 GITGNVNDMLAANAGNVQQMTANMAAITGQLNESVQRMDGDGKMSADMR-----SSLENI 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+++ + +++ + D+R+T ++ +K+
Sbjct: 232 KVITDRFTVIAGEMENIATDPQSSADIRKTLHNTAQISEKV 272
>gi|170691588|ref|ZP_02882753.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
gi|170143793|gb|EDT11956.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
Length = 320
Score = 93.1 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + +L + + + + +V GL TD++VR+
Sbjct: 1 MENKSHAFWAGLFTIVLLGAIATAAFLFNVDRAV---RVPYDLIARTNVTGLFTDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+ +P + + L+ P+ ST ++ QG+ GI +I+L ++
Sbjct: 58 RGLDVGKVQSIKFDRAHPGQIVIRILVDTHAPITHSTFGSLGFQGVTGIAFIQLDDTGRD 117
Query: 121 KKTIFQIA 128
+
Sbjct: 118 PSPLASSP 125
>gi|22124064|ref|NP_667487.1| hypothetical protein y0144 [Yersinia pestis KIM 10]
gi|21956811|gb|AAM83738.1|AE013614_12 hypothetical protein y0144 [Yersinia pestis KIM 10]
Length = 190
Score = 93.1 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ + F ++ I ++ GL S V+
Sbjct: 6 MQTKKSEVWVGMFILIAILAVIFLCLKVADIKSVGNQPTYRIYANFDNIGGLKNHSPVKI 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I+ + +++ +RT GL G ++ L+ +
Sbjct: 66 GGVVVGRVAEITLDTKNYTP-RVAIDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 124
Query: 120 EKKTIFQIATERNQRA 135
+ + I +
Sbjct: 125 DPEMGTSILKDGGTIQ 140
>gi|296166532|ref|ZP_06848963.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898144|gb|EFG77719.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 350
Score = 93.1 bits (228), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 92/286 (32%), Gaps = 6/286 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ V +F ++L S + V L + VR G+
Sbjct: 10 RSMMIKVSIFAAAMLLVSAALVVVFGDFRFGPENTYHAT---FTDVSRLKSGQKVRIAGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + G+ L+ + I LY ST A IR + L G Y+E+++ E +
Sbjct: 67 PVGAVSGVKLNPDNT--IDVTFGIDERYTLYSSTRAVIRYENLVGDRYLEITSGPGELRK 124
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ AT +Q + + + +IE ++ +
Sbjct: 125 LPPGATINSQHTQPALDLDALLGGLRPVLKGL-DADKVNTISSAVIELLQGQGGALSNVL 183
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S + + + + + + + + +K + I
Sbjct: 184 ADASAFSSALGQRDQLIGDVINNLNTVLKTVDQRSAQFSASVEQLQQLISGLAKKKDDIA 243
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I ++ ++ + N+ ++ + + + ++D+ ++ +
Sbjct: 244 GAIPPLASTTTDLTELLKNSRRPLQGILENTRPLATELDNRKAELN 289
>gi|157827481|ref|YP_001496545.1| ABC transporter substrate binding protein [Rickettsia bellii OSU
85-389]
gi|157802785|gb|ABV79508.1| ABC transporter substrate binding protein [Rickettsia bellii OSU
85-389]
Length = 149
Score = 93.1 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 49/122 (40%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T +G F V I+ F F + + S+ + ++ S +G+S S V
Sbjct: 1 MKQNIIETIIG-FAVLIIAFLFLIFAYKTGSSMTNAKGYQLNASF-QSAEGISVGSDVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI +G + +FLD + + + + + A + T GL G YI +
Sbjct: 59 SGIKIGNVKKIFLDPTSY-FATVYLNVNENVKIPKDSKAQVVTSGLLGGKYIAIVPGNDN 117
Query: 121 KK 122
Sbjct: 118 DY 119
>gi|303230938|ref|ZP_07317681.1| virulence factor Mce family protein [Veillonella atypica
ACS-049-V-Sch6]
gi|302514320|gb|EFL56319.1| virulence factor Mce family protein [Veillonella atypica
ACS-049-V-Sch6]
Length = 419
Score = 93.1 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 32/275 (11%), Positives = 86/275 (31%), Gaps = 4/275 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F + + I ++ R + + P + V+GL + V+F+G+
Sbjct: 4 TTEAKVGAFTIVGIVLFVLGIIFVGRIDVFAKPQMTITGDFAQ-VNGLKNGNQVKFSGVA 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G + + + + K I T + +T T+ + G G +I++S +
Sbjct: 63 IGTVSDIEITPSG---VMVKMKIDDKTQIPSDSTFTLGSDGFLGDKFIQISPGKSTVYLH 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + ++ E + I+ + +T +
Sbjct: 120 DGDSVKGEGIDAMDKAMQSAQKLMAGTEQMLQSINTIIGDPKTQDALKHSLQSTAVMADN 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ Q + + +T++ + D++ +
Sbjct: 180 AVAVTQNMADVTAQLNQAAQQFNADGNAGNDMRAILTNIKQTTDRVDHMARSMEGTVTDP 239
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
Q + + +++Q+ V+ + E
Sbjct: 240 KAQENIKATLHNTEQISARVNKLLGGKPYASETSN 274
>gi|295699944|ref|YP_003607837.1| hypothetical protein BC1002_4342 [Burkholderia sp. CCGE1002]
gi|295439157|gb|ADG18326.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1002]
Length = 431
Score = 93.1 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 39/427 (9%), Positives = 109/427 (25%), Gaps = 24/427 (5%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS-VRFNGIPVGRIVGLFLDQEY 77
+F WL V + + G+ D + V G+ VG + + L +
Sbjct: 27 IAAFAMTGWLG-VRALTQQGETVTVTF-DNAYGMKPDDTIVTLRGVKVGAVSEITLAPDG 84
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
H A+ I Y + + ++
Sbjct: 85 -QHVQAELKIDRAEKKYLRSE----------TRFFLRGAHVDLNDPASLKGVLSGPEIVM 133
Query: 138 TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI 197
P + + ++ + ++ +
Sbjct: 134 EPGPGEPASRFDGVDRRPALAPGHGPVVTYLVRFDGAVGDLKSGADVQLRGFDVGTVTSV 193
Query: 198 DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSS 257
+ ++ + + + +
Sbjct: 194 RLNYDARTGALSTPVEIALNPAQLGIVGAPPPANGDWRPLVDAMLGRLVATGLRARLSQD 253
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
V+ + Q + L + +A + ++
Sbjct: 254 PPVVGADKINLDFVQGAPVATLASEGGLPVIPGVAAA----NLDTTMAKANEVIQKIDDL 309
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
T ++ + I+ + + + DS +++I++ + +
Sbjct: 310 PIRQTGEQVRSIAAHINALSSSPQIKDSLTHIDHSVAQIDHTL-----QQVSPQIGPLVA 364
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
RDT+ +R + + L + S ND+ +++L +T + +R+P+ ++
Sbjct: 365 QLRDTASAADRTVAAANRTLGGDASS-QNDLPAAMQELTDTARSIRALADYLDRHPEALI 423
Query: 438 WGREKGS 444
GR++ +
Sbjct: 424 HGRQQET 430
>gi|120555618|ref|YP_959969.1| hypothetical protein Maqu_2707 [Marinobacter aquaeolei VT8]
gi|120325467|gb|ABM19782.1| Mammalian cell entry related domain protein [Marinobacter aquaeolei
VT8]
Length = 149
Score = 93.1 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 47/118 (39%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VGLF+++ L F +S + + GL+ V
Sbjct: 1 MAQRSTEIIVGLFMIAGLAALMFLALQVSGLSPKSAEQTYTLYANFNDTGGLTPRGKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ VG I + LD++ + I + + + A IRT GL G YI++S
Sbjct: 61 AGVTVGTIESITLDRDTF-QARVTMSIHAEVDNIPADSAAVIRTSGLLGEQYIDISIG 117
>gi|186897001|ref|YP_001874113.1| hypothetical protein YPTS_3703 [Yersinia pseudotuberculosis PB1/+]
gi|186700027|gb|ACC90656.1| Mammalian cell entry related domain protein [Yersinia
pseudotuberculosis PB1/+]
Length = 185
Score = 93.1 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ + F ++ I ++ GL S V+
Sbjct: 1 MQTKKSEVWVGMFILIAILAVVFLCLKVADIKSVGNQPTYRIYANFDNIGGLKNHSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVAEITLDTKNYMP-RVAIDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKTIFQIATERNQRA 135
+ + I +
Sbjct: 120 DPEMGTSILKDGGTIQ 135
>gi|327396239|dbj|BAK13661.1| luene tolerance protein YrbD [Pantoea ananatis AJ13355]
Length = 184
Score = 93.1 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 54/146 (36%), Gaps = 1/146 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG+F++ + F ++ + ++ GL S V+
Sbjct: 1 MQSKKSEIWVGVFMIMAMIAVLFLCLRVADLKSLGTEPTWKLYATFDNIGGLKASSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + L+ + + + +++ IRTQGL G ++ L+
Sbjct: 61 GGVVIGRVTDISLEPKTLLPRVTMDISDKYANQIPDTSSLAIRTQGLLGEQFLSLNIGFD 120
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + + + + +
Sbjct: 121 DPELGSSMLNDGGTIRDTKSAMVLED 146
>gi|83941935|ref|ZP_00954397.1| paraquat-inducible protein, putative [Sulfitobacter sp. EE-36]
gi|83847755|gb|EAP85630.1| paraquat-inducible protein, putative [Sulfitobacter sp. EE-36]
Length = 700
Score = 93.1 bits (228), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/413 (10%), Positives = 126/413 (30%), Gaps = 27/413 (6%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LDQEYPNHSLAKALIRPDTPLYPSTT 98
+ + +V GL+ + V +G+ +G + L +D + S + +
Sbjct: 302 INVIFDENVSGLAVGAPVELSGLNIGEVDSLAGIVDYDQFGDSRVRLNVTLAIQPARLGL 361
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ A + + + + + + A +
Sbjct: 362 PGDVSAESALAFLQDRVVNGLRARLASASLLTGGLKVELVVVEDAPSGRLVAAGENFPVM 421
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ +E + N I++++++ +S + +
Sbjct: 422 PTTKNETSDAAATVEGVFSRI-------------NNLPIEELLNSAIGLMNSLQAFVGSD 468
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ + +I + + ++NI VS N + + ++ T+ + + + +
Sbjct: 469 ELQQTPRDVRTLINEVTGLVSSDSVQNIPVSLNATLLRVETLVATLEE-EQMAKRLLDAV 527
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
+ + FS+ + + ++ + E+T + I T + +
Sbjct: 528 DSVSEAATSFSTSTEGVPELVEEMQAVAAKASELELQQLVDELTALTRSADQVIGTPDAV 587
Query: 339 T--SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN 396
+L ++ + + ++ A++ N A+ A +++ + + + +
Sbjct: 588 ALPGSLKNALDELNYTLQELREGGAVENVNRTLASARNAADNIAVSAQDLPQIVNRLSTL 647
Query: 397 LQNF---------SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
Q +R +Q+ + ERNP ++ GR
Sbjct: 648 FTQAERTIEGYNKGDQISRTAQETMRDIQKAADALASLARTIERNPNSLLLGR 700
Score = 44.5 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 45/463 (9%), Positives = 117/463 (25%), Gaps = 49/463 (10%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
V + + L + + VI G+ + +R+ + VGR
Sbjct: 29 IVWIIPILALVAALGVAF------NSYNSRGPVIFVEFDKGAGIKAGETELRYRDVTVGR 82
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + +A + + + +A+ +
Sbjct: 83 VEEVGFT-TGLGKVVASIRVDKNVAPFIDASASFWIVQPEVSAQGISGLGTVLSGVYIEG 141
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + + A + +I+ + + ++ +
Sbjct: 142 SWNDEVGDFAERFVGSDSPPLIRAGQSGLQIAFRTVGNGTLTDDAPILYRGIEVGRLGKA 201
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKN------TFNTITDLITSLDKMIKAIDLQKVNQ 241
+ I + + + + S ++ +D A +
Sbjct: 202 EIAPRGNFAIVEALIYEEHRNLINSSTRFWDSSGFSLSLGPGGAEIDFQSIATLIGGGVT 261
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + + D R EV + +++ D + + L
Sbjct: 262 FDTFVSGGDRVQDGTVFDIFPSKEDARSAVFNASEVEPLLINVIFDENVSGLAVGAPVEL 321
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK----------FAE 351
+ + + I + D R ++ T+ D S +
Sbjct: 322 SGLNIGEVDSLAGIVDYDQFGDSRVRLNVTLAIQPARLGLPGDVSAESALAFLQDRVVNG 381
Query: 352 LMSKINN----------------------ISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
L +++ + + A EN + + T E +
Sbjct: 382 LRARLASASLLTGGLKVELVVVEDAPSGRLVAAGENFPVMPTTKNETSDAAATVEGVFSR 441
Query: 390 IPSI-GNNLQNFSQSGLNDIQNLV--RKLQETVNHFDDCLNNF 429
I ++ L N + +N +Q V +LQ+T +N
Sbjct: 442 INNLPIEELLNSAIGLMNSLQAFVGSDELQQTPRDVRTLINEV 484
Score = 43.8 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 43/447 (9%), Positives = 124/447 (27%), Gaps = 42/447 (9%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA-------LIRPDTP 92
+ I +G L+ D+ + + GI VGR+ + + LI T
Sbjct: 170 LQIAFRTVGNGTLTDDAPILYRGIEVGRLGKAEIAPRGNFAIVEALIYEEHRNLINSSTR 229
Query: 93 LYPS-----------------TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ S + AT+ G+ T++ ++ ++ + R+
Sbjct: 230 FWDSSGFSLSLGPGGAEIDFQSIATLIGGGVTFDTFVSGGDRVQDGTVFDIFPSKEDARS 289
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
+ I+ + + ++ NI + + ++
Sbjct: 290 AVFNASEVEPLLINVIFDENVSGLAVGAPVELSGLNIGEVDSLAGIVDYDQFGDSRVRLN 349
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ P +++ + D + + + A + + V +
Sbjct: 350 VTLAIQPARLGLPGDVSAESALAFLQDRVVNGLRARLASASLLTGGLKVELVVVEDAPSG 409
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ T + ++ + S ++ + ++ + + + + S
Sbjct: 410 RLVAAGENFPVMPTTKNETSDAAATVEGVFSRINNLPIEELLNSAIGLMNSLQAFVGSDE 469
Query: 316 SAIREITDQRQKIISTINTIENITSNL----NDSSQKFAELMSKINNISALKENNSLFKD 371
+ T + N+ N + + L++ + K
Sbjct: 470 LQQTPRDVRTLINEVTGLVSSDSVQNIPVSLNATLLRVETLVATLEEEQMAKRLLDAVDS 529
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN----------- 420
A +F ++E + + + S+ L + + + L + +
Sbjct: 530 VSEAATSFSTSTEGVPELVEEMQAVAAKASELELQQLVDELTALTRSADQVIGTPDAVAL 589
Query: 421 --HFDDCLNNFERNPQDIVWGREKGSV 445
+ L+ Q++ G +V
Sbjct: 590 PGSLKNALDELNYTLQELREGGAVENV 616
>gi|227538360|ref|ZP_03968409.1| ABC superfamily ATP binding cassette transporter, permease protein
[Sphingobacterium spiritivorum ATCC 33300]
gi|227241875|gb|EEI91890.1| ABC superfamily ATP binding cassette transporter, permease protein
[Sphingobacterium spiritivorum ATCC 33300]
Length = 337
Score = 93.1 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/319 (12%), Positives = 95/319 (29%), Gaps = 2/319 (0%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VGLFV+ L I L + V V GL ++V F+G+ VG
Sbjct: 10 LVVGLFVLIGLIILVAGILTLGGQQKKFTKTLTVTTEF-EDVKGLKVGNNVWFSGVKVGI 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + + + + + A + + GL G + I L + + I
Sbjct: 69 VKDISFESIKYVKVVMSIEAKSSEFIRKDAVAKLGSDGLIGNSIITLVGGSQTAQPIEDG 128
Query: 128 ATERNQRAMITA-TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + ++ N ++ + S+++ + LT + +
Sbjct: 129 DILHSAKGTDMEAMMATLSVNNDNLVEITRNFAVLSQNLVDGKGMVGAMLTDSSMVVSLS 188
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
++ N + + + ++ N I L T + Q +
Sbjct: 189 KSLDNLNKLMTNANQASNNLVAVTNKLNNNQGLIHQLSTDTAVFASLRESAAQLQGVTQT 248
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + ++ +N ++V E +I +L + + + +
Sbjct: 249 ASALMSNLNATSARLNDKNNVVGALTNDPEGAAEIKQILRNLNLSTAKLDQNMEAMQSNF 308
Query: 307 STSNMRSSISAIREITDQR 325
+E
Sbjct: 309 LLRGFFKKQQKEQEKAKAD 327
>gi|145222690|ref|YP_001133368.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215176|gb|ABP44580.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 343
Score = 93.1 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 4/130 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ T +G F+ L F + ++ + +V GL T+ VR
Sbjct: 4 SIRRDATRLGAFLAVCLLGVFGLFAVFGQM-RFGEKTQQYRAEFV-NVTGLETNDFVRIA 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG++ + + + ++ + L + A IR L G Y+ L
Sbjct: 62 GVEVGKVENVEIQPDTT--AVVEFTADDSVVLTQGSRAVIRYDDLIGGRYLALEEGAGGT 119
Query: 122 KTIFQIATER 131
+ + T
Sbjct: 120 QKLNPGGTIP 129
>gi|126668783|ref|ZP_01739731.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Marinobacter sp. ELB17]
gi|126626766|gb|EAZ97415.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Marinobacter sp. ELB17]
Length = 149
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLFV++ + F +S + + GL V
Sbjct: 1 MAQRTIEIIVGLFVLAGMGAMMFLALQVSGLSLAAAGSTYTVYADFTDTGGLGPRGRVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG I + LD++ + I D + + A IRT GL G YI++S
Sbjct: 61 AGVQVGSIESIELDRDTF-KARVTLSINSDVNNIPADSAAMIRTSGLLGEQYIDISIG 117
>gi|294669771|ref|ZP_06734837.1| hypothetical protein NEIELOOT_01671 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308337|gb|EFE49580.1| hypothetical protein NEIELOOT_01671 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 166
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 44/120 (36%), Gaps = 5/120 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG---PMAEVIIRIPGSVDGLSTDSS 57
M+ VGLFV+ + F + ++ + G V + GL +
Sbjct: 1 MKRSILEFWVGLFVLIGIAALAFLSFRVAGGGNFGGGSGQTYTVYANFTD-IGGLKVKAP 59
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
++ +G+ VGR+ + LD + + +A I T GL G YI L
Sbjct: 60 IKASGVLVGRVQNIALDPATY-QAKVTLQLDKQYTFSSDVSAQILTSGLLGEQYIGLMQG 118
>gi|254822748|ref|ZP_05227749.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 351
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/282 (13%), Positives = 91/282 (32%), Gaps = 6/282 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
V +F V++L S + GP + V L VR G+PVG
Sbjct: 15 IKVSIFAVAMLLVSAGLVVVFGDFR--FGPESTYHATFTD-VSRLKAGQKVRIAGVPVGA 71
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L+++ K + LY ST A IR + L G Y+E+++ E + +
Sbjct: 72 VSDIKLNRDNT--IDVKFGVDKRYTLYSSTRAVIRYENLVGDRYLEITSGPGELRKLPAG 129
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
AT +Q + + + +I+ ++ + S
Sbjct: 130 ATINSQHTQPALDLDALLGGLRPVLKGL-DADKVNTISSAVIQLLQGQGGALSNVLADTS 188
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ + + + + + + + + I I
Sbjct: 189 AFSSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSTSVDQLQQLITGLAEHKDDIAGAIP 248
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
++ + + N+ ++ + + + ++D+ ++ +
Sbjct: 249 PLASTTTDLTQLLKNSRRPLQGVLENTRPLATELDNRKAEVN 290
>gi|315443154|ref|YP_004076033.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261457|gb|ADT98198.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 343
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 4/130 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ T +G F+ L F + ++ + +V GL T+ VR
Sbjct: 4 SIRRDATRLGAFLAVCLLGVFGLFAVFGQM-RFGEKTQQYRAEFV-NVTGLETNDFVRIA 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG++ + + + ++ + L + A IR L G Y+ L
Sbjct: 62 GVEVGKVENVEIQPDTT--AVVEFTADDSVVLTQGSRAVIRYDDLIGGRYLALEEGAGGT 119
Query: 122 KTIFQIATER 131
+ + T
Sbjct: 120 QKLNPGGTIP 129
>gi|261379497|ref|ZP_05984070.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria subflava NJ9703]
gi|284797960|gb|EFC53307.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Neisseria subflava NJ9703]
Length = 159
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 2/112 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDGLSTDSSVRFNGIPV 65
VGLFV+ F + + + + + GL T++ V+ G+ V
Sbjct: 2 EFWVGLFVLLGAAAIGFLAFRAAGGQSFGKSSQTYTVYADFSDIGGLKTNAPVKSAGVLV 61
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
GR+ + LD + + + +A I T GL G YI L
Sbjct: 62 GRVASIQLDPKSY-QAKVALNLDSQYQFSSDVSAQILTSGLLGEQYIGLQQG 112
>gi|253991144|ref|YP_003042500.1| hypothetical protein PAU_03670 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782594|emb|CAQ85758.1| conserved hypothetical Protein [Photorhabdus asymbiotica]
Length = 172
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/146 (19%), Positives = 63/146 (43%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG+F++ L F ++ + ++ GL S V+
Sbjct: 1 MQSKKSEIWVGVFILIALTAIVFLCLKVADIKSVGSQPTYRLYATFDNIGGLKERSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+V + LD++ +A +++ + +++ +IRT GL G YI L+ ++
Sbjct: 61 GGVVIGRVVTISLDEKTYTPQVALDIMKQYNRIPDTSSLSIRTSGLLGEQYIALNMGFED 120
Query: 121 KKTIFQIATERNQRAMITATPSGINY 146
+I + ++ + +
Sbjct: 121 PDMGTRILKDGDRVQDTKSAMVLEDM 146
>gi|317152442|ref|YP_004120490.1| Mammalian cell entry related domain-containing protein
[Desulfovibrio aespoeensis Aspo-2]
gi|316942693|gb|ADU61744.1| Mammalian cell entry related domain protein [Desulfovibrio
aespoeensis Aspo-2]
Length = 148
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/111 (22%), Positives = 47/111 (42%), Gaps = 2/111 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T+VGLFV+ L + L + + + V GL ++ V+ G+ +G
Sbjct: 7 ETAVGLFVLVGLIAVGYMSVKLGKVQLFTDKYYSLHANFSD-VSGLKANAPVQMFGVDIG 65
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + LDQ+ + +I L +++T GL G YI+++
Sbjct: 66 FVKTITLDQD-KGVARVSMMIEKQVALTDDAIVSVKTNGLIGDKYIKIAPG 115
>gi|89093956|ref|ZP_01166901.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Oceanospirillum sp. MED92]
gi|89081842|gb|EAR61069.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Oceanospirillum sp. MED92]
Length = 152
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + SVG F+++ + +S + + ++ GL+ + V
Sbjct: 1 MRMRVLEISVGAFILAGILALIGLALNVSGLTMSTSNGSYTVYARFENIGGLTPRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ +G++ + LD + + I + L ++A I T GL G YI ++ +
Sbjct: 61 SGVTIGKVTQIDLDTDEL-VAKVAMEIDGNVDFLSIDSSAAILTAGLLGEQYIGVTVGAE 119
Query: 120 EKKTIFQIATERNQ 133
E+ E Q
Sbjct: 120 EEYLKNGDFIEDTQ 133
>gi|320538923|ref|ZP_08038599.1| putative ABC-type phospholipid transporter [Serratia symbiotica
str. Tucson]
gi|320031083|gb|EFW13086.1| putative ABC-type phospholipid transporter [Serratia symbiotica
str. Tucson]
Length = 176
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 52/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K +G F++ L F ++ I ++ GL S V+
Sbjct: 1 MQTKKSEIWIGAFMLIALCAMVFICLQVANIKSIGSEPTYRIYAAFDNIGGLKMRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I+ + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVANIELDTKTYTP-RVALDIQEKYHQIPDTSSLAIRTAGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRA 135
+ I + +
Sbjct: 120 DPDMGTAILKDGDTIQ 135
>gi|255322242|ref|ZP_05363388.1| mce related protein [Campylobacter showae RM3277]
gi|255300615|gb|EET79886.1| mce related protein [Campylobacter showae RM3277]
Length = 310
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/117 (24%), Positives = 52/117 (44%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K YT +GLF V ++ + +W+ + I+ G+ DS+V+F
Sbjct: 1 MGNKINYTLIGLFFVLVVSALGVTAWWMGGYGKRADDYRSYFIKTTSLPSGIKKDSTVKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ G + + E + +R D P+ +TA+ QG+ GI Y+ +S
Sbjct: 61 IGVDAGTVKDIRFADEKEALIELELSVRKDIPIRTDSTASAEIQGITGIGYLNISRG 117
>gi|163735491|ref|ZP_02142924.1| paraquat-inducible protein B, putative [Roseobacter litoralis Och
149]
gi|161391304|gb|EDQ15640.1| paraquat-inducible protein B, putative [Roseobacter litoralis Och
149]
Length = 693
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/412 (9%), Positives = 123/412 (29%), Gaps = 23/412 (5%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LDQEYPNHSLAKALIRPDTPLYPST 97
EV + ++ GL+ + V +G+ VG + L +D E S + +
Sbjct: 294 EVRVIFDENISGLTLGAPVELSGLRVGSVENLSGVVDPETYGDSRVRLAVVLGIQPARLG 353
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T A + E + + + P + +E + +
Sbjct: 354 LPEEITPQAALMLLEEQVRNGLRARLASTSILTGGLKIELVQLPDAPPDRVEISEGSIPR 413
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + I ++E T + + + + +++ + +
Sbjct: 414 MPSAPSEISDASASVEGVFTRINSLPIEEVMISVMGFLQSAENLLSSEDIRAAPEDLRGL 473
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ + + + + ++ + +++ ++
Sbjct: 474 LGDIRGVITSQTVQDIPVTLNIALGRLDGILAQIEEQQGVARILASIDAATSAATAVGTS 533
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
+ + L+++ + + + T + S+ + + + ++
Sbjct: 534 VEGLPELVTELAGVAAEAASLPLKDLTQQVTDVLASADA------------VVSAPAMQE 581
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ ++L + + ++++ A+ N+ A+ A +++ + + I
Sbjct: 582 LPASLAGALDELNRTLAELREGGAVDNVNATLLSARNAADAVALSTQDLPDLVDRITQVF 641
Query: 398 QNFSQSGL---------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
S + D Q +R + + N ERNP ++ GR
Sbjct: 642 DEASATIAGYNKGEVLSRDAQAAMRDISQASNAISALARLLERNPSALIRGR 693
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/435 (8%), Positives = 111/435 (25%), Gaps = 41/435 (9%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT------------- 98
LS D+ + F GI +GR+ + E + P L +T
Sbjct: 175 LSADTPILFRGIEIGRVGPARISPEGNFAIAEAVIYEPHGRLITPSTRFWDASGFSFSIG 234
Query: 99 -----------ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
A++ G+ T++ + A+E + R +
Sbjct: 235 PAGAEIDFTSVASLLGGGITFDTFVSGGEQVGDGSVFEVFASETDARNSVFNASEVDLLE 294
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + + ++ + + ++ + +
Sbjct: 295 VRVIFDENISGLTLGAPVELSGLRVGSVENLSGVVDPETYGDSRVRLAVVLGIQPARLGL 354
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
P + + + + + + A + + + + ++ +
Sbjct: 355 PEEITPQAALMLLEEQVRNGLRARLASTSILTGGLKIELVQLPDAPPDRVEISEGSIPRM 414
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ ++ + + +S + + + + + + + S +
Sbjct: 415 PSAPSEISDASASVEGVFTRINSLPIEEVMISVMGFLQSAENLLSSEDIRAAPEDLRGLL 474
Query: 328 IISTINTIENITSNL----NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTS 383
++ N + + ++++I + + A A +
Sbjct: 475 GDIRGVITSQTVQDIPVTLNIALGRLDGILAQIEEQQGVARILASIDAATSAATAVGTSV 534
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRK-------------LQETVNHFDDCLNNFE 430
E + + + + L D+ V +QE L+
Sbjct: 535 EGLPELVTELAGVAAEAASLPLKDLTQQVTDVLASADAVVSAPAMQELPASLAGALDELN 594
Query: 431 RNPQDIVWGREKGSV 445
R ++ G +V
Sbjct: 595 RTLAELREGGAVDNV 609
Score = 45.3 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 15/88 (17%), Positives = 34/88 (38%), Gaps = 9/88 (10%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
V+++L F + Y+ + + + G+ + VRF + VG + +
Sbjct: 28 VLALLTALFVAF------QTYNARGPMITVEF-ENAAGIVPRETEVRFRDVKVGVVEEVM 80
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTAT 100
E + +A+ + Y +TA+
Sbjct: 81 FS-EGLSSVVARIRMDKSVAPYVDSTAS 107
>gi|114328399|ref|YP_745556.1| toluene transport system Ttg2C protein [Granulibacter bethesdensis
CGDNIH1]
gi|114316573|gb|ABI62633.1| toluene transport system Ttg2C protein [Granulibacter bethesdensis
CGDNIH1]
Length = 182
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 5/135 (3%)
Query: 1 MESKNY-YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+N VG +++ F Y ++ S + + + ++ GL+ S VR
Sbjct: 1 MASRNSAEIIVGAAILA--VAGGFLTYAMANSGRTSVSGYPLTAQF-ENITGLTAGSDVR 57
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G + L+ + ++ +R D L + A I + GL G Y+ LS
Sbjct: 58 MAGVKIGTVEKTSLNSKTF-QAVVTLRVRDDIHLPKDSAAQILSDGLLGSQYLGLSPGGD 116
Query: 120 EKKTIFQIATERNQR 134
E+
Sbjct: 117 EQVIPPGGQITITTP 131
>gi|303230231|ref|ZP_07316999.1| virulence factor Mce family protein [Veillonella atypica
ACS-134-V-Col7a]
gi|302515157|gb|EFL57131.1| virulence factor Mce family protein [Veillonella atypica
ACS-134-V-Col7a]
Length = 419
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/275 (11%), Positives = 87/275 (31%), Gaps = 4/275 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F + + I ++ R + + P + V+GL + V+F+G+
Sbjct: 4 TTEAKVGAFTIVGVVLFVLGIIFVGRIDVFAKPQMTITGDFAQ-VNGLKNGNQVKFSGVA 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G + + + L K + T + +T T+ + G G +I++S +
Sbjct: 63 IGTVSDIEITPSG---VLVKMKVDDKTQIPSDSTFTLGSDGFLGDKFIQISPGKSTVYLH 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + ++ E + I++ + +T +
Sbjct: 120 DGDSVKGEGVDAMDKAMQSAQKLMAGTEQMLQSINNIIGDPKTQDALKHSLQSTAVMADN 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ Q + + +T++ + D++ +
Sbjct: 180 AVAVTQNMADVTAQLNQAAQQFNADGNAGNDMRAILTNIKQTTDRVDHMARSMEGTVTDP 239
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
Q + + +++Q+ V+ + E
Sbjct: 240 KAQENIKATLHNTEQISARVNKLLGGKPYASETVN 274
>gi|167854683|ref|ZP_02477463.1| hypothetical protein HPS_01287 [Haemophilus parasuis 29755]
gi|219870960|ref|YP_002475335.1| resistance to organic solvents ABC transporter periplasmic
component [Haemophilus parasuis SH0165]
gi|167854220|gb|EDS25454.1| hypothetical protein HPS_01287 [Haemophilus parasuis 29755]
gi|219691164|gb|ACL32387.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Haemophilus parasuis
SH0165]
Length = 169
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 2/113 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFV+ L F ++ + + + ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFVLLGLGALVFLGLRVANVQGFSSEKSYSLYATFDNIGGLKVRAPIKVGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
R+ + LD + I + + +++ +I+T GL G YI L+
Sbjct: 68 RVSDIQLDPKTYTP-KVTLAINEEFNQIPDTSSLSIKTAGLLGEQYIALNVGF 119
>gi|153808749|ref|ZP_01961417.1| hypothetical protein BACCAC_03048 [Bacteroides caccae ATCC 43185]
gi|149128575|gb|EDM19793.1| hypothetical protein BACCAC_03048 [Bacteroides caccae ATCC 43185]
Length = 297
Score = 92.7 bits (227), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 92/290 (31%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIIALCVLIYGINWLKGIHMFQPSSYFY--AKFQNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + ++ D P + + + + + + ++A + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIYYDYVNPGNVIVEVELDTELRIPKGSSAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + + + + + +
Sbjct: 119 EKYAV------GDTIPGKLNNGMMESVAQLMPKVQEMLPKLDSILISLNNILGDKSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T +S K + + + + + + +L ++ A +K++
Sbjct: 173 LHSMETTTANLAVVSSQMKGLMSKDIPQLTGKLNTIGDNFIAISGNLKEIDYAATFKKID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L N+++ + + + +D + LL D +
Sbjct: 233 ETLANVKILTEKLNSKDNTLGLLFNDPS-LYNNLNATTENAASLLEDLKA 281
>gi|240168190|ref|ZP_04746849.1| MCE-family protein Mce1B [Mycobacterium kansasii ATCC 12478]
Length = 346
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 44/119 (36%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G F + ++ FS + + +V GL VR
Sbjct: 1 MKITGTAIRLGAFALVLVLFSVMIVIVFGQIR--FDRTYGYSAEFS-NVSGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ +G++ + L + + PLY STTA IR L G Y+EL
Sbjct: 58 SGVEIGKVKEVSLV-DGGKRVRVDFDVDRSIPLYQSTTAQIRYLDLIGNRYLELKRGDG 115
>gi|225166394|ref|ZP_03728061.1| mce-related protein [Opitutaceae bacterium TAV2]
gi|224799363|gb|EEG17923.1| mce-related protein [Opitutaceae bacterium TAV2]
Length = 165
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 49/122 (40%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG FV+ + + + G + R S G++ S++
Sbjct: 1 MKQTKLELIVGAFVLVGIVAIAWLAIKIGSGTLLGGGTYLLEARFANS-GGINAGSNIIV 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD +Y ++ ++ L T A I+T GL G YI L+ +
Sbjct: 60 AGVSVGRVESVRLDSDYN--AIVTLRLQKTLKLPTDTMAAIKTSGLIGDRYIALAPGADD 117
Query: 121 KK 122
Sbjct: 118 TH 119
>gi|54027025|ref|YP_121267.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018533|dbj|BAD59903.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 342
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/143 (20%), Positives = 46/143 (32%), Gaps = 3/143 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K+ G + ++L W + G V G+ VR
Sbjct: 1 MSVKSGKALAGFSLFAVLAIVLTYTIWSTLQRSVPGDTHSYSATFTD-VMGVRVGDDVRM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D+ + I L +T A +R Q L G YI L E
Sbjct: 60 AGVRVGRVDKIDFDE--GYLARIDFRIEHKQRLTTTTKALVRYQNLIGQRYIALVPGEGE 117
Query: 121 KKTIFQIATERNQRAMITATPSG 143
+ + +R + S
Sbjct: 118 GEPLAPGGHIPVERTEPSFDVSA 140
>gi|45443559|ref|NP_995098.1| hypothetical protein YP_3828 [Yersinia pestis biovar Microtus str.
91001]
gi|45438428|gb|AAS63975.1| putative membrane protein [Yersinia pestis biovar Microtus str.
91001]
Length = 190
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 53/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ + F ++ I ++ GL S V+
Sbjct: 6 MQTKKSEVWVGMFILIAILAVIFLCLKVADIKSVSNQPTYRIYANFDNIGGLKNHSPVKI 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I+ + +++ +RT GL G ++ L+ +
Sbjct: 66 GGVVVGRVAEITLDTKNYTP-RVAIDIQQRYNHIPDTSSLAVRTSGLLGEQFLALNVGFE 124
Query: 120 EKKTIFQIATERNQRA 135
+ + I +
Sbjct: 125 DPEMGTSILKDGGTIQ 140
>gi|241667293|ref|ZP_04754871.1| hypothetical protein FphipA2_00895 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875844|ref|ZP_05248554.1| ABC transporter [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254841865|gb|EET20279.1| ABC transporter [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 176
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 7/156 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K++ TSVG+F++ + F + +S ++ + + +V L T++SV
Sbjct: 1 MRNKHFETSVGIFIIIGVLCLIFLTFKVSGTSFKSFGSNEYTIEADFK-NVGSLRTNASV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ +GR+ + L++ Y ++ I D + + +A I G+ G Y+ L
Sbjct: 60 KIAGVEIGRVTKISLEKTYNGFMAVVTIAINSDKKIPANYSAAIAMSGILGDNYVAL--- 116
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ I IA + + EN
Sbjct: 117 TPPSEDIMSIAGIGDTENNSEQDKYLHQGSVIELEN 152
>gi|291615987|ref|YP_003518729.1| YrbD [Pantoea ananatis LMG 20103]
gi|291151017|gb|ADD75601.1| YrbD [Pantoea ananatis LMG 20103]
Length = 189
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 54/146 (36%), Gaps = 1/146 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG+F++ + F ++ + ++ GL S V+
Sbjct: 6 MQSKKSEIWVGVFMIMAMIAVLFLCLRVADLKSLGTEPTWKLYATFDNIGGLKASSPVKI 65
Query: 61 NGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + L+ + + + +++ IRTQGL G ++ L+
Sbjct: 66 GGVVIGRVTDISLEPKTLLPRVTMDISDKYANQIPDTSSLAIRTQGLLGEQFLSLNIGFD 125
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + + + + +
Sbjct: 126 DPELGSSMLNDGGTIRDTKSAMVLED 151
>gi|222054640|ref|YP_002537002.1| Mammalian cell entry related domain protein [Geobacter sp. FRC-32]
gi|221563929|gb|ACM19901.1| Mammalian cell entry related domain protein [Geobacter sp. FRC-32]
Length = 349
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/364 (12%), Positives = 119/364 (32%), Gaps = 23/364 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG+F + L F + + S+ GL VR G+ VG+I
Sbjct: 8 KVGIFFILGLI-LFGFMLEVGEKWNPFEKKVMYKT-FLTSITGLKIGDPVRLAGVDVGKI 65
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + +E ++P T + + AT+R L G ++ +S +
Sbjct: 66 DKITILEE---KVQIDFEVKPGTRIKTDSVATLRLTNLLGGQFLGISFGSPGAPILPPGG 122
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
T + + +N S+ + D+ I ++ EN + + A ++ T
Sbjct: 123 TVKGRDV---------ANIDIIVDNVSEVVQDAKLLITQLNENQNEVMGKISAILDDNRT 173
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
L ++I++I+ + S + + +K I L+ ++
Sbjct: 174 NLQSSIANINSITTKLDRGDGSLAMLLNDKLLYENFRDASASVKNIALKIDKGEGTIGKL 233
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+++ D R + + + + + + + E + +
Sbjct: 234 VNDDL---------LYSDARSAMARINDSMKDVKDIAAKINRGEGTMGKLVNDEALYNEV 284
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ +I I + + + + + + + + +K + M + + ++ S+
Sbjct: 285 RDASKNIKEITRKINDGEGTLGKLVNDDKLYRDTTATLKKAEKAMDGLGDTGPIQVLGSV 344
Query: 369 FKDA 372
Sbjct: 345 IGTL 348
>gi|255691400|ref|ZP_05415075.1| mce related protein [Bacteroides finegoldii DSM 17565]
gi|260623046|gb|EEX45917.1| mce related protein [Bacteroides finegoldii DSM 17565]
Length = 297
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 93/290 (32%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIIALCVLVYGINWLKGIHMFQPSSYFY--AKFQNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + +F D P + + + + + + ++A + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIFYDYTNPGNVVVEVELDTELRIPKGSSAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K T + + + + + +
Sbjct: 119 EKYAV------GDTIPGTLNNGMMESVAKLMPQVQEMLPKLDSILISLNTILGDKSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T +S K + + + +S + + +L ++ A +K++
Sbjct: 173 LHSIEKTTANLAVVSSQVKGLMSNDIPQLTSKLNTIGDNFVTISGNLKEVDYAATFKKID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L N+++ + + + +D + LL D
Sbjct: 233 ETLSNVKMLTEKLNSKDNTLGLLFNDP-TLYNNLNATTENAAGLLKDLKE 281
>gi|293368856|ref|ZP_06615460.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
gi|292636161|gb|EFF54649.1| conserved hypothetical protein [Bacteroides ovatus SD CMC 3f]
Length = 297
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 93/290 (32%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIVALCVLIYGINWLKGIHMFQPSSYFY--AKFENVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + ++ D P + + + + + + +TA + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIYYDYAKPGNVIVEVELDTELRIPKGSTAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K T + + + + + +
Sbjct: 119 EKYAV------GDTIPGTMNNGMMESAAKLIPKVEEMLPKLDSILISLNNILGDKSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T +S K + + + +S + + +L ++ A +K++
Sbjct: 173 LHSIEKTTANLAVVSSQVKGLMSNDIPQLTSKLNTIGDNFVVISGNLKEIDYAATFKKID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L N+++ + + + +D + LL D
Sbjct: 233 ETLANVKILTEKLNSKDNTLGLLFNDP-TLYNNLNATTENAASLLEDLKE 281
>gi|221134713|ref|ZP_03561016.1| hypothetical protein GHTCC_07277 [Glaciecola sp. HTCC2999]
Length = 155
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 50/130 (38%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG FV+ + + + D + + ++ GL S+V+
Sbjct: 1 MTTRKTELMVGFFVILTISATLLLAMKVVNQGFSDNESSYTLYAKFDNIGGLKARSAVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ ++LD E N + +L + +++ I T GL G YI
Sbjct: 61 GGVTVGRVESIYLDPEDFNPVVVLSLSQQYNNFPDTSSVAILTSGLLGEQYIGFQPGFAF 120
Query: 121 KKTIFQIATE 130
+ +
Sbjct: 121 DDFVTLADGD 130
>gi|332184387|gb|AEE26641.1| ABC-type transport system protein [Francisella cf. novicida 3523]
Length = 241
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 82/241 (34%), Gaps = 3/241 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+ GLFV+ ++F F ++LS D + S+ GL+ S V +
Sbjct: 3 ENSIKNLIAGLFVIFMVFVMIFIGFFLSG-GFKDQDTTTFVTNFK-SISGLNVGSDVSYK 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKE 120
G +G++ + ++++ P I P+Y T AT+++ G+ G + ++
Sbjct: 61 GFSIGKVSDISINKDNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDEK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I ++ Q I + PS + ++ + + + S K++
Sbjct: 121 NTSLDLINIKKGQIPEIKSKPSQLESIMNKIGAIASSLEEISSKFNKMMSPENLDRFNQF 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I +N S + + + +
Sbjct: 181 TDSVNILLYNLSNSSIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPSTIVRGVDHE 240
Query: 241 Q 241
+
Sbjct: 241 E 241
Score = 45.3 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 33/247 (13%), Positives = 85/247 (34%), Gaps = 12/247 (4%)
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ I ++ V ++ D + + ++ + VS F
Sbjct: 4 NSIKNLIAGLFVIFMVFVMIFIGFFLSGGFKDQDTTTFVTNFKSISGLNVGSDVSYKGFS 63
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
I+ D + + ++ +I ++ T ++ +S
Sbjct: 64 IGKVSDISINKDNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDEKNTS 123
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ I Q +I S + +E+I + + + E+ SK N + + +
Sbjct: 124 LDLINIKKGQIPEIKSKPSQLESIMNKIGAIASSLEEISSKFNKMMSPEN---------- 173
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ F ++ +N + ++ N+ + L ++ + + QET+ ++ + E +P
Sbjct: 174 -LDRFNQFTDSVNILLYNLSNS-SIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPS 231
Query: 435 DIVWGRE 441
IV G +
Sbjct: 232 TIVRGVD 238
>gi|227358278|ref|ZP_03842619.1| ABC superfamily ATP binding cassette transporter, binding protein
[Proteus mirabilis ATCC 29906]
gi|227161614|gb|EEI46651.1| ABC superfamily ATP binding cassette transporter, binding protein
[Proteus mirabilis ATCC 29906]
Length = 178
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 56/148 (37%), Gaps = 3/148 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VGLFVV L F ++ + + G++ GL S V+
Sbjct: 1 MQSKKIEVWVGLFVVIALIAVVFLSLKVADIKEVGNQPTYRVYASFGNIGGLKERSPVKI 60
Query: 61 NGIPVGRIVGLFL--DQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + L + E I + S++ +IRT GL G ++ L+
Sbjct: 61 GGVVIGRVASITLKEEVEGNYRPEVALDILNIYDHIPDSSSLSIRTSGLLGEQFLALNLG 120
Query: 118 RKEKKTIFQIATERNQRAMITATPSGIN 145
++ + + + +
Sbjct: 121 FYDEDLGSDFLKDGGRITNTHSAMVLED 148
>gi|119511434|ref|ZP_01630545.1| hypothetical protein N9414_16474 [Nodularia spumigena CCY9414]
gi|119463899|gb|EAW44825.1| hypothetical protein N9414_16474 [Nodularia spumigena CCY9414]
Length = 494
Score = 92.3 bits (226), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/384 (10%), Positives = 112/384 (29%), Gaps = 8/384 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGL ++ L + WL+R + I+ + G+ + VR+ G+ VG I
Sbjct: 20 VGLLILVGLGAFVMIVLWLNRFTA-GTNSYKFIVEF-ANAGGMQRGAPVRYRGVKVGNIS 77
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
L N + I P D + GL + I+++
Sbjct: 78 KLK---AGSNAVEVEIEIAPADLMISRDAVIEANQSGLISESIIDITPKTSIPVGAIAKP 134
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ N + + ++ + L + + +T
Sbjct: 135 LDNNCDDSLIVCNGSRLTGEIGISIDELIRTSTNLATTYNDPAFYQNLNRLLESSTAAAT 194
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID-LQKVNQILENIQ 247
+A+ + + Q + + + ++ ++
Sbjct: 195 GVASLTQDFQVLSKSFQQQLGTFSTTANSVQQSTNKLTVSATKTVDQLGATASEFSATAN 254
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+S + V + + E ++ +S S + L N+
Sbjct: 255 QASRLLSNLDELVTSNRSSLVGALNNITETSNQLRVTVSSLSPAVNQLTQGELLNNLESL 314
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
++N + + +R+ + + + ++ + + + ++ S ++ ++
Sbjct: 315 SANAAQASANLRDASKTLNDPQNLVL-MQQTLDSARVTFENTQKITSDLDELTGDPAFRQ 373
Query: 368 LFKDAQRAMHTFRDTSEKINRYIP 391
+ ++E++ + +
Sbjct: 374 NLLQLVNGLSGLVSSTEQMQQDVK 397
>gi|229492751|ref|ZP_04386552.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229320410|gb|EEN86230.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 340
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 5/134 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + Y G+FV+ ++ + I + D + GL VR
Sbjct: 1 MKVRGYTVKFGIFVLVMILVNAGLILVFGQMRGGDARSYSAEFV---NASGLRAGDKVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + + + + + ST A +R Q L G Y+EL
Sbjct: 58 AGVPVGSVGSVEFGGNH--RAHVSFSVDTGDTVTVSTRAAVRYQDLVGNRYLELLDDPGI 115
Query: 121 KKTIFQIATERNQR 134
+ Q + R
Sbjct: 116 AEPQPQGESIPVDR 129
>gi|226306855|ref|YP_002766815.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226185972|dbj|BAH34076.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 340
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 47/134 (35%), Gaps = 5/134 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + Y G+FV+ ++ + I + D + GL VR
Sbjct: 1 MKVRGYTVKFGIFVLVMILVNAGLILVFGQMRGGDARSYSAEFV---NASGLRAGDKVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + + + + + ST A +R Q L G Y+EL
Sbjct: 58 AGVPVGSVGSVEFGGNH--RAHVSFSVDTGDTVTVSTRAAVRYQDLVGNRYLELLDDPGI 115
Query: 121 KKTIFQIATERNQR 134
+ Q + R
Sbjct: 116 AEPQPQGESIPVDR 129
>gi|262203808|ref|YP_003275016.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262087155|gb|ACY23123.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 353
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 5/114 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +G F V +L + SR + S + + S V+ G+
Sbjct: 9 RATLIKLGAFTVVMLLVFAALVVVFSRYRSGSSNDYTAV---FTSASAMKSGSKVKIAGV 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
VG + G+ L+++ + + PL S A IR + L G Y+EL
Sbjct: 66 EVGSVDGVSLNRDN--EAEVDFTVDRKYPLPKSVRALIRYENLTGDRYLELERG 117
>gi|329960255|ref|ZP_08298697.1| hypothetical protein HMPREF9446_00252 [Bacteroides fluxus YIT
12057]
gi|328532928|gb|EGF59705.1| hypothetical protein HMPREF9446_00252 [Bacteroides fluxus YIT
12057]
Length = 297
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 95/290 (32%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ ++ L + I +L N + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIAALCILIYGINYLKGINMFKPSSYFYVK--FQNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D P +A+ I P+ + +TA + + L G+ L
Sbjct: 59 DGFRVGIVRDLYYDYTQPGKVVAEIDIDPELRIPKGSTAELAAEMLGGVKMNLLLVNNPH 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + + + + + + + + P
Sbjct: 119 EKYQVGDTIPGTLNNGMMEKVANMMPQVEQ------MLPKLDSILASLNTILADPSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T + +++ + + + + +L ++ A +QKV+
Sbjct: 173 LHNVQALTANMAATTQQLQVLMKNDIPQLTGKLNTIGDNFILISNNLKEIDYAAAMQKVD 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ ++ ++ + +D LL D S
Sbjct: 233 STLANVKMITDKLNSKNNTIGLLFNDP-ALYNNLNATTSNAASLLEDLKS 281
>gi|315441807|ref|YP_004074686.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260110|gb|ADT96851.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 343
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 88/296 (29%), Gaps = 9/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G F + +L F+ I + I + GL + VR
Sbjct: 1 MKITGTAIKLGAFALVLLMFTAIIIVVFGQMRFDRTTGYS---AIFSNASGLRSGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ G+ L + + + L+ TTA++R L G Y+EL+
Sbjct: 58 SGVEVGKVKGVELI-DNGSKVRVDFDVDRSLELFDETTASVRYLNLIGDRYLELARGDSN 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIEKP 175
+ + + I F E + Q I
Sbjct: 117 TRLAAGGTIPVERTQPALDLDALIGGFRPVFQSLDPEKVNTIAQSLITVFQGQGGTINDI 176
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L T + ++ + + T + +++ + K
Sbjct: 177 LDQTASLTSALADRDQAIGEVVTNLNTVLDATVRHQQEFDDTVKNFEVLITGLKNRADPL 236
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ V I + + + + +T+ + Q + +++ LL
Sbjct: 237 AESVADISDAAGTIGDLLADNRPLLQSTISKLEILNQPLVDQRDQLNQLLEQIPDA 292
>gi|198275621|ref|ZP_03208152.1| hypothetical protein BACPLE_01790 [Bacteroides plebeius DSM 17135]
gi|198271250|gb|EDY95520.1| hypothetical protein BACPLE_01790 [Bacteroides plebeius DSM 17135]
Length = 295
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/284 (15%), Positives = 89/284 (31%), Gaps = 8/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL + L FF I +L + + + V+GL+ S V NG +G
Sbjct: 4 EVKIGLAGIGALLILFFGINYLKGISMFKPESYYYV--DFTDVNGLAQSSPVFANGYKIG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ L + + P H + + D + + A + T+ L + L +
Sbjct: 62 IVRDLQYNHQNPGHVIVGIEVDQDLRIPAGSKAELVTEMLGTVKMNMLLKHESTTF-LNP 120
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
T + + + K S S Q + + K +
Sbjct: 121 GDTIEGTANTGILGKAEKDLLPKVEQMMPKLDSILSSLNQLLADPALKQ----TLHNAEK 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T N S + + + +S+ + + +L + A QKV+ L+N+
Sbjct: 177 LTASLNATSTQLHSLMSKDIPQLTSNVTAITENLKGISENLKGIDYAATFQKVDSTLQNV 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + + ++D + LL D
Sbjct: 237 HLLTEKLGSKDNSIGLLLND-DALYKNLNATSANAASLLKDLQE 279
>gi|145221305|ref|YP_001131983.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213791|gb|ABP43195.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 343
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/296 (13%), Positives = 88/296 (29%), Gaps = 9/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G F + +L F+ I + I + GL + VR
Sbjct: 1 MKITGTAIKLGAFALVLLMFTAIIIVVFGQMRFDRTTGYS---AIFSNASGLRSGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ G+ L + + + L+ TTA++R L G Y+EL+
Sbjct: 58 SGVEVGKVKGVELI-DNGSKVRVDFDVDRSLELFDETTASVRYLNLIGDRYLELARGDSN 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIEKP 175
+ + + I F E + Q I
Sbjct: 117 TRLAAGGTIPVERTQPALDLDALIGGFRPVFQSLDPEKVNTIAQSLITVFQGQGGTINDI 176
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L T + ++ + + T + +++ + K
Sbjct: 177 LDQTASLTSALADRDQAIGEVVTNLNTVLDTTVRHQQEFDDTVKNFEVLITGLKNRADPL 236
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ V I + + + + +T+ + Q + +++ LL
Sbjct: 237 AESVADISDAAGTIGDLLADNRPLLQSTISKLEILNQPLVDQKDQLNQLLEQIPDA 292
>gi|298530601|ref|ZP_07018003.1| Mammalian cell entry related domain protein [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509975|gb|EFI33879.1| Mammalian cell entry related domain protein [Desulfonatronospira
thiodismutans ASO3-1]
Length = 374
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/369 (12%), Positives = 105/369 (28%), Gaps = 23/369 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ Y ++G+FV L ++ L + V + SV G+ S V+
Sbjct: 1 MSTQPNYYTIGIFVSIGLALFLGALTVLG-TGALWRETVTVETYLDESVQGIDRGSQVKM 59
Query: 61 NGIPVGRIVGLFLDQ--------EYPNHSLAKALIRPDTPLYPSTTA---TIRTQGLAGI 109
G+ VGR+ + + L K + D P A + + G+
Sbjct: 60 RGVTVGRVDEITFAGLKYPGSVDPGDRYVLLKISLELDEFGVPDQEAFERFLEQEIQKGL 119
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
L + + P+ + E + + + ++
Sbjct: 120 RIRLLPMGITGAAYLEMDYVD----------PARHPPLPVSWEPRNPYVPSAPGTFARLE 169
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
E E T E N++ H+ + + + + + + + ++
Sbjct: 170 ETFESLGNTMAKIEEMDIQKTLNHLDHLIQSLDKSVQSFDLAGISARAEVFIEELRETNR 229
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I + + + + + R +I L +
Sbjct: 230 KISGLIGPLEDPEEKRTDLHAVLKDSRQILQKVDKGLDRLQIDKEGGAADQIARTLDNLH 289
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
K+ + ++ ++ SS S R + + S + + N+ S+
Sbjct: 290 QASKTLPETMDSIDVTAASLK-ESSKSVERLSSRSYTMLRSQNEELRRLLQNMQIISENL 348
Query: 350 AELMSKINN 358
+L
Sbjct: 349 LDLSQDARK 357
>gi|119946508|ref|YP_944188.1| hypothetical protein Ping_2885 [Psychromonas ingrahamii 37]
gi|119865112|gb|ABM04589.1| Mammalian cell entry related domain protein [Psychromonas
ingrahamii 37]
Length = 160
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 48/118 (40%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K VG+FV+ + + ++ + + + +V GL S V+
Sbjct: 5 MSQKKTELWVGIFVIGAMISLAILAFNVAGLSFKGEGRSYTLYASFSNVGGLKVRSPVKL 64
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + L++E + A+ +++ +I T GL G YI L
Sbjct: 65 GGVVVGRVEEISLNKESYMPVVRLAMFENKGYYPETSSVSILTSGLLGEQYIGLQPGF 122
>gi|197287460|ref|YP_002153332.1| hypothetical protein PMI3657 [Proteus mirabilis HI4320]
gi|194684947|emb|CAR47138.1| putative exported protein [Proteus mirabilis HI4320]
Length = 178
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 56/148 (37%), Gaps = 3/148 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VGLFVV L F ++ + + G++ GL S V+
Sbjct: 1 MQSKKIEVWVGLFVVIALIAVVFLSLKVADIKEVGNQPTYRVYASFGNIGGLKERSPVKI 60
Query: 61 NGIPVGRIVGLFLDQ--EYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + L + E I + S++ +IRT GL G ++ L+
Sbjct: 61 GGVVIGRVASITLKEEMEGNYRPEVALDILNIYDHIPDSSSLSIRTSGLLGEQFLALNLG 120
Query: 118 RKEKKTIFQIATERNQRAMITATPSGIN 145
++ + + + +
Sbjct: 121 FYDEDLGSDFLKDGGRITNTHSAMVLED 148
>gi|212702435|ref|ZP_03310563.1| hypothetical protein DESPIG_00452 [Desulfovibrio piger ATCC 29098]
gi|212674096|gb|EEB34579.1| hypothetical protein DESPIG_00452 [Desulfovibrio piger ATCC 29098]
Length = 317
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/310 (10%), Positives = 91/310 (29%), Gaps = 7/310 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +++ T+VG FV+ L I L + E ++ GSV GL+ + V F
Sbjct: 1 MAKQSFKTAVGAFVIGGLALLVAGIILLGG-GRMFSDDIEYVLYFDGSVSGLNIGAPVVF 59
Query: 61 NGIPVGRIVGLFLDQ---EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+P+G++ + L+ + + ++ + T + I +
Sbjct: 60 RGVPMGQVTRISLEANPRDASVTIPVYIRLDENSIVRAGVTGELTDNFRQEILRRLIQRG 119
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + T + + + ++I I + +
Sbjct: 120 LRARLQLQSLIT---GQYRVELDFLPNTPANFRSPMPDREIPTLPSPIDTLQRTVASLPL 176
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+A N D + + + +
Sbjct: 177 EEMARTTAGILEKLNAALSGDALERGLKAFATTFEEAQALLAGMQESQKTLAQALEKLNA 236
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++ + + + + V + + + + Q++ L+ + ++ ++S
Sbjct: 237 AATSAQHDLPQALQSTRDAMNNVSSVSLATKAVVERNAPLTQELRRLIQESAAAVRSLRA 296
Query: 298 SAFLENIADS 307
+
Sbjct: 297 FMDVLERNPE 306
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/116 (13%), Positives = 50/116 (43%), Gaps = 6/116 (5%)
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
+T + + + + +S + A+ + K+N + ++ D +A+ + RD ++
Sbjct: 206 FATTFEEAQALLAGMQESQKTLAQALEKLNAAATSAQH-----DLPQALQSTRDAMNNVS 260
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ + + +++ L+++ V ++ ERNP+ ++ G++
Sbjct: 261 S-VSLATKAVVERNAPLTQELRRLIQESAAAVRSLRAFMDVLERNPEALLRGKQGS 315
>gi|60683066|ref|YP_213210.1| hypothetical protein BF3616 [Bacteroides fragilis NCTC 9343]
gi|60494500|emb|CAH09297.1| putative exported protein [Bacteroides fragilis NCTC 9343]
Length = 297
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 92/286 (32%), Gaps = 8/286 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ V+ L F I +L N + + +V+GL+ S V
Sbjct: 1 MKLITKEVRIGIAGVAALCLLVFGINYLKGINMFKPASYFYVK--FHNVNGLAQSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + + D P + + + + D + ++A + + + G+ L
Sbjct: 59 DGVRVGIVRDIAYDYNQPENVIVEVEVDTDLRIPKGSSAELVPELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + + + + + + + +
Sbjct: 119 ERYTVGDTIPGTLNNGMMEKVAAMMPAVEK------MLPKLDSILTSLNTIMADQSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T S K++ + + + + +L ++ A +K++
Sbjct: 173 LHSIEKTTANLEVTSRQLKVLMNNDIPQLTGKLNTIGDNFVVISGNLKEIDYAATFKKID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
L N+++ + + V ++D + Q + L
Sbjct: 233 TTLSNVKMLTEKLNSKDNTVGLLLNDPQLYNNLNQTTINAANLLED 278
>gi|53715108|ref|YP_101100.1| hypothetical protein BF3824 [Bacteroides fragilis YCH46]
gi|253566259|ref|ZP_04843713.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|265766959|ref|ZP_06094788.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|52217973|dbj|BAD50566.1| conserved hypothetical protein [Bacteroides fragilis YCH46]
gi|251945363|gb|EES85801.1| conserved hypothetical protein [Bacteroides sp. 3_2_5]
gi|263253336|gb|EEZ24812.1| conserved hypothetical protein [Bacteroides sp. 2_1_16]
gi|301164581|emb|CBW24140.1| putative exported protein [Bacteroides fragilis 638R]
Length = 297
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 89/283 (31%), Gaps = 5/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ V+ L F I +L N + + +V+GL+ S V
Sbjct: 1 MKLITKEVRIGIAGVAALCLLVFGINYLKGINMFKPASYFYVK--FHNVNGLAQSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + + D P + + + + D + ++A + + + G+ L
Sbjct: 59 DGVRVGIVRDIAYDYNQPENVIVEVEVDTDLRIPKGSSAELVPELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH---IQKIIENIEKPLT 177
++ + + + + I S Q I +
Sbjct: 119 ERYTVGDTIPGTLNNGMMEKVAAMMPAVEKMLPKLDSILTSLNTIMADQSIPATLHSIEK 178
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
TT T + + I ++ + + D + K+ +
Sbjct: 179 TTANLEVTSRQLKVLMNNDIPQLTGKLNTIGDNFVVISGNLKEIDYAATFKKIDATLSNV 238
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
K+ N + ++ + + Q+ N ++ E ++
Sbjct: 239 KMLTEKLNSKDNTVGLLLNDPQLYNNLNQTTINAANLLEDLKE 281
>gi|224536058|ref|ZP_03676597.1| hypothetical protein BACCELL_00922 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522317|gb|EEF91422.1| hypothetical protein BACCELL_00922 [Bacteroides cellulosilyticus
DSM 14838]
Length = 298
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 97/290 (33%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I +L + + P ++ +++GL+ S V
Sbjct: 2 MKYLTKEVRIGIAGIIALCILVYGINYLKGIHMF-KPTNYFYVKFH-NINGLTKSSPVFA 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D P +A+ + P+ + +TA + ++ + G+ L
Sbjct: 60 DGFRVGIVRDLYYDYNEPGKVVAEIDVDPELRIPKGSTAELASELMGGVKMNLLLANNPR 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + ++ + K + + + + P
Sbjct: 120 EKYL------TGDTLQGNVNNGVMDQVATIMPQVEKMLPKLDSILASLNTILGDPAIPGT 173
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + S + + + + + + + +L ++ A +++
Sbjct: 174 LHSVQNTMASMEITSRQLQAIMSKDIPQLTKKLNTIGDNFVTVSDNLKEIDYAAAFARID 233
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ ++ + + + ++D LL D S
Sbjct: 234 STLANVKMITDQLGRKDNTIGLLLNDPS-LYNNLNATTANAASLLEDLKS 282
>gi|255020878|ref|ZP_05292934.1| hypothetical protein ACA_1100 [Acidithiobacillus caldus ATCC 51756]
gi|254969669|gb|EET27175.1| hypothetical protein ACA_1100 [Acidithiobacillus caldus ATCC 51756]
Length = 313
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 110/314 (35%), Gaps = 6/314 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
MES+ + +F+ + + W+ S + P SV GL + ++VRF
Sbjct: 1 MESRAHALVALVFLALLTLGLIAAGLWMHHSEPKGK---VYDVLSPYSVSGLQSQAAVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + D + P + + DTP+ +T A ++ QG+ G++Y+ LS +
Sbjct: 58 KGVKVGEVQSIGFDPKNPRLVRVRIRVARDTPITRATFAELQPQGVTGLSYLSLSDSGTD 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I + E M + ++ + N ++ + E + TI
Sbjct: 118 FAPIAHPSGEPPVIPMHPSFIEALSRNGESLVNQGNTLAQRLN--AVLDERNRRHFAQTI 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+++ + L + + T ++ S + L + + L V
Sbjct: 176 AHLDQATAELVALEQSLKPALAELPATIAATRSTMEASHSLLLDLNDLAVSAQAPLASVT 235
Query: 241 QILENIQVSSNN-FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++Q+ S T+ ++ + + + +++ L + +S
Sbjct: 236 AAARSVQLLSAAGLSSIETLNYQTLPELNQLSSQLAQSSRRLGKLSENLEDAPQSLVFGR 295
Query: 300 FLENIADSTSNMRS 313
S
Sbjct: 296 RPPPPGPGQPGFAS 309
Score = 45.3 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 17/156 (10%), Positives = 48/156 (30%), Gaps = 5/156 (3%)
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ ++ E+ N N R + + + +L +
Sbjct: 138 IEALSRNGESLVNQGNTLAQRLNAVLDERNRRHFAQTIAHLDQATAELVALEQSLKPALA 197
Query: 348 KFAELMSKINNISALK-----ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ ++ + + N L AQ + + + + + ++++ +
Sbjct: 198 ELPATIAATRSTMEASHSLLLDLNDLAVSAQAPLASVTAAARSVQLLSAAGLSSIETLNY 257
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
L ++ L +L ++ N E PQ +V+
Sbjct: 258 QTLPELNQLSSQLAQSSRRLGKLSENLEDAPQSLVF 293
>gi|15610634|ref|NP_218015.1| MCE-family protein MCE4B [Mycobacterium tuberculosis H37Rv]
gi|15843110|ref|NP_338147.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31794674|ref|NP_857167.1| MCE-family protein MCE4B [Mycobacterium bovis AF2122/97]
gi|121639417|ref|YP_979641.1| Mce-family protein mce4B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663362|ref|YP_001284885.1| MCE-family protein Mce4B [Mycobacterium tuberculosis H37Ra]
gi|148824705|ref|YP_001289459.1| MCE-family protein mce4B [Mycobacterium tuberculosis F11]
gi|215405539|ref|ZP_03417720.1| MCE-family protein mce4B [Mycobacterium tuberculosis 02_1987]
gi|215413411|ref|ZP_03422095.1| MCE-family protein mce4B [Mycobacterium tuberculosis 94_M4241A]
gi|215429004|ref|ZP_03426923.1| MCE-family protein mce4B [Mycobacterium tuberculosis T92]
gi|215432466|ref|ZP_03430385.1| MCE-family protein mce4B [Mycobacterium tuberculosis EAS054]
gi|215447831|ref|ZP_03434583.1| MCE-family protein mce4B [Mycobacterium tuberculosis T85]
gi|218755275|ref|ZP_03534071.1| MCE-family protein mce4B [Mycobacterium tuberculosis GM 1503]
gi|219559565|ref|ZP_03538641.1| MCE-family protein mce4B [Mycobacterium tuberculosis T17]
gi|224991913|ref|YP_002646602.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800540|ref|YP_003033541.1| MCE-family protein mce4B [Mycobacterium tuberculosis KZN 1435]
gi|254234084|ref|ZP_04927409.1| MCE-family protein mce4B [Mycobacterium tuberculosis C]
gi|254366844|ref|ZP_04982885.1| MCE-family protein mce4B [Mycobacterium tuberculosis str. Haarlem]
gi|254552600|ref|ZP_05143047.1| MCE-family protein mce4B [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260188550|ref|ZP_05766024.1| MCE-family protein mce4B [Mycobacterium tuberculosis CPHL_A]
gi|260202677|ref|ZP_05770168.1| MCE-family protein mce4B [Mycobacterium tuberculosis T46]
gi|260206865|ref|ZP_05774356.1| MCE-family protein mce4B [Mycobacterium tuberculosis K85]
gi|289445095|ref|ZP_06434839.1| MCE-family protein mce4B [Mycobacterium tuberculosis T46]
gi|289449200|ref|ZP_06438944.1| MCE-family protein mce4B [Mycobacterium tuberculosis CPHL_A]
gi|289555764|ref|ZP_06444974.1| MCE-family protein mce4B [Mycobacterium tuberculosis KZN 605]
gi|289571731|ref|ZP_06451958.1| MCE-family protein mce4B [Mycobacterium tuberculosis T17]
gi|289576232|ref|ZP_06456459.1| MCE-family protein mce4B [Mycobacterium tuberculosis K85]
gi|289747334|ref|ZP_06506712.1| MCE-family protein mce4b [Mycobacterium tuberculosis 02_1987]
gi|289752219|ref|ZP_06511597.1| MCE-family protein mce4B [Mycobacterium tuberculosis T92]
gi|289755628|ref|ZP_06515006.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289759657|ref|ZP_06519035.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289763678|ref|ZP_06523056.1| MCE-family protein mce4B [Mycobacterium tuberculosis GM 1503]
gi|294995732|ref|ZP_06801423.1| MCE-family protein mce4B [Mycobacterium tuberculosis 210]
gi|297636154|ref|ZP_06953934.1| MCE-family protein mce4B [Mycobacterium tuberculosis KZN 4207]
gi|297733154|ref|ZP_06962272.1| MCE-family protein mce4B [Mycobacterium tuberculosis KZN R506]
gi|298526978|ref|ZP_07014387.1| MCE-family protein mce4B [Mycobacterium tuberculosis 94_M4241A]
gi|306777848|ref|ZP_07416185.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu001]
gi|306782579|ref|ZP_07420916.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu002]
gi|306790766|ref|ZP_07429088.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu004]
gi|306795296|ref|ZP_07433598.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu005]
gi|306799484|ref|ZP_07437786.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu006]
gi|306805330|ref|ZP_07441998.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu008]
gi|306809516|ref|ZP_07446184.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu007]
gi|306969623|ref|ZP_07482284.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu009]
gi|306973966|ref|ZP_07486627.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu010]
gi|307081674|ref|ZP_07490844.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu011]
gi|307086282|ref|ZP_07495395.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu012]
gi|313660485|ref|ZP_07817365.1| MCE-family protein mce4B [Mycobacterium tuberculosis KZN V2475]
gi|2924435|emb|CAA17735.1| MCE-FAMILY PROTEIN MCE4B [Mycobacterium tuberculosis H37Rv]
gi|13883456|gb|AAK47961.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31620271|emb|CAD95714.1| MCE-FAMILY PROTEIN MCE4B [Mycobacterium bovis AF2122/97]
gi|121495065|emb|CAL73551.1| Mce-family protein mce4B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124599613|gb|EAY58717.1| MCE-family protein mce4B [Mycobacterium tuberculosis C]
gi|134152353|gb|EBA44398.1| MCE-family protein mce4B [Mycobacterium tuberculosis str. Haarlem]
gi|148507514|gb|ABQ75323.1| MCE-family protein Mce4B [Mycobacterium tuberculosis H37Ra]
gi|148723232|gb|ABR07857.1| MCE-family protein mce4B [Mycobacterium tuberculosis F11]
gi|224775028|dbj|BAH27834.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322043|gb|ACT26646.1| MCE-family protein mce4B [Mycobacterium tuberculosis KZN 1435]
gi|289418014|gb|EFD15254.1| MCE-family protein mce4B [Mycobacterium tuberculosis T46]
gi|289422158|gb|EFD19359.1| MCE-family protein mce4B [Mycobacterium tuberculosis CPHL_A]
gi|289440396|gb|EFD22889.1| MCE-family protein mce4B [Mycobacterium tuberculosis KZN 605]
gi|289540663|gb|EFD45241.1| MCE-family protein mce4B [Mycobacterium tuberculosis K85]
gi|289545485|gb|EFD49133.1| MCE-family protein mce4B [Mycobacterium tuberculosis T17]
gi|289687862|gb|EFD55350.1| MCE-family protein mce4b [Mycobacterium tuberculosis 02_1987]
gi|289692806|gb|EFD60235.1| MCE-family protein mce4B [Mycobacterium tuberculosis T92]
gi|289696215|gb|EFD63644.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289711184|gb|EFD75200.1| MCE-family protein mce4B [Mycobacterium tuberculosis GM 1503]
gi|289715221|gb|EFD79233.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|298496772|gb|EFI32066.1| MCE-family protein mce4B [Mycobacterium tuberculosis 94_M4241A]
gi|308213828|gb|EFO73227.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu001]
gi|308324769|gb|EFP13620.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu002]
gi|308332872|gb|EFP21723.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu004]
gi|308336455|gb|EFP25306.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu005]
gi|308340333|gb|EFP29184.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu006]
gi|308344188|gb|EFP33039.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu007]
gi|308348118|gb|EFP36969.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu008]
gi|308352882|gb|EFP41733.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu009]
gi|308356695|gb|EFP45546.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu010]
gi|308360649|gb|EFP49500.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu011]
gi|308364266|gb|EFP53117.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu012]
gi|323717840|gb|EGB27031.1| MCE-family protein mce4B [Mycobacterium tuberculosis CDC1551A]
gi|326905340|gb|EGE52273.1| MCE-family protein mce4B [Mycobacterium tuberculosis W-148]
gi|328460271|gb|AEB05694.1| MCE-family protein mce4B [Mycobacterium tuberculosis KZN 4207]
Length = 350
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 88/286 (30%), Gaps = 6/286 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ V +F V +L + + GP L VR G+
Sbjct: 10 RSMVIKVSVFAVVMLLVAAGLVVVFGDFR--FGPTTVYHATFTD-ASRLKAGQKVRIAGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + + L+ ++ I LY ST A IR + L G ++E+++ E +
Sbjct: 67 PVGSVKAVKLNPDHS--IDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRK 124
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ T + + + +IE ++ +
Sbjct: 125 LPPGGTINVAHTQPALDLDALLGGLRPV-LKGFDADKINTITSAVIELLQGQGGPLANVL 183
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
A + + + + + + + + + + I
Sbjct: 184 ADTGAFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIA 243
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I ++ ++ + N+ ++ + + + ++D+ ++ +
Sbjct: 244 GAISPLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVN 289
>gi|167626718|ref|YP_001677218.1| hypothetical protein Fphi_0499 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596719|gb|ABZ86717.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 176
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 64/156 (41%), Gaps = 7/156 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K++ TSVG+F++ + F + +S ++ + + +V L T++SV
Sbjct: 1 MRNKHFETSVGIFIIIGVLCLIFLTFKVSGTSFKSFGSNEYTIEADFK-NVGSLRTNASV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L++ Y + I D + + +A I G+ G Y+ L
Sbjct: 60 KIAGVEVGRVTKISLEKTYNGFMAAVTIAINSDKKIPANYSAAIAMSGILGDNYVAL--- 116
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ I IA + + EN
Sbjct: 117 TPPSEDIMSIAGIGDTENNSEQDKYLHQGSVIELEN 152
>gi|238025996|ref|YP_002910227.1| ABC transporter periplasmic substrate-binding protein [Burkholderia
glumae BGR1]
gi|237875190|gb|ACR27523.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia glumae BGR1]
Length = 168
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 46/123 (37%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFV+ F + + P V +R ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVLVGFLALLFLALKVGNMSSLSFQPTYPVKMRF-DNIGGLKPRAAVK 61
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 62 SAGVVVGRVGTIGFDTNTY-QALVTIELDKQYAFPKDSSAKILTSGLLGEQYIGLEPGGD 120
Query: 120 EKK 122
+
Sbjct: 121 TEM 123
>gi|167564341|ref|ZP_02357257.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia oklahomensis EO147]
Length = 155
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL + V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKLKFDNIGGLKPRAPVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 63 AGVVVGRVGSIGFDTNTY-QALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLEPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|260219763|emb|CBA26619.1| hypothetical protein Csp_H39510 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 335
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 68/163 (41%), Gaps = 3/163 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G FV+ +L WL+R I P V GL + ++VR+
Sbjct: 1 MENKSHAFAAGAFVLVLLALMTALAVWLTRDT---TEQRVFEISSPEGVTGLQSQAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + L + + P+ ST A + QG+ G+ +I+L +
Sbjct: 58 KGVLVGRVTEIALDPVQRGNVLLRIAVNETAPITKSTFAALGFQGVTGLAFIQLDDKEEG 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR 163
+ + M + S ++ N ++ S
Sbjct: 118 SAALVAQGDAVPRIPMRPSMVSRLSEQGGNLLTQLEQASIRMN 160
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/192 (10%), Positives = 62/192 (32%), Gaps = 2/192 (1%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
+ ++ V ++ + +++ +S + + + I + + +
Sbjct: 126 DAVPRIPMRPSMVSRLSEQGGNLLTQLEQASIRMNSLLATDNQKQLMGAIGNLSQAAANI 185
Query: 315 IS-AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN-NISALKENNSLFKDA 372
+ R + + + + + + +++ + A++ + F+
Sbjct: 186 SALTQRAGAVLGAEGAPDAVNLPRMVQQADVTLKSMQSTAERLSTSAEAVRNSADEFRRT 245
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
R ++ T +KI + ++ + L + V TV N
Sbjct: 246 NRRLNEPGGTLDKIAQSTEALATTSRQVQSQLLPRLNRTVEDTGRTVRQVGRAAETLGDN 305
Query: 433 PQDIVWGREKGS 444
PQ ++WGR +
Sbjct: 306 PQSVLWGRSSTA 317
>gi|254253459|ref|ZP_04946777.1| hypothetical protein BDAG_02723 [Burkholderia dolosa AUO158]
gi|124896068|gb|EAY69948.1| hypothetical protein BDAG_02723 [Burkholderia dolosa AUO158]
Length = 186
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVVGFLALLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVK 61
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D ++ + P ++A I T GL G YI L
Sbjct: 62 SAGVVVGRVKSIGFDTNTY-QAVVTVDLDSQYPFPKDSSAKILTSGLLGEQYIGLEPGGD 120
Query: 120 EKK 122
+
Sbjct: 121 TEM 123
>gi|282896222|ref|ZP_06304245.1| conserved hypothetical protein [Raphidiopsis brookii D9]
gi|281198911|gb|EFA73789.1| conserved hypothetical protein [Raphidiopsis brookii D9]
Length = 472
Score = 91.9 bits (225), Expect = 2e-16, Method: Composition-based stats.
Identities = 50/440 (11%), Positives = 134/440 (30%), Gaps = 25/440 (5%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGL + L WL+R +VI+ G+ VR+ G+ VG I
Sbjct: 15 VGLIFLIGLGAFGVIFLWLNRVTP-GRSSYQVIVEF-ADAGGMQKGDPVRYRGVKVGSIA 72
Query: 70 GLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ PN + I P+ + + GL + ++++ + T+
Sbjct: 73 RMT---TKPNAVEVELEINDPNLLIPADSRIEANQSGLISESIVDITPIGD--VTLDPNT 127
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + + K + + ST
Sbjct: 128 AKPLDKDCNPGLIICHQSGKLRGQIGTSVDRLIRQSSDFADKYGNKEFYDNVNRLLITST 187
Query: 189 VLANNISHIDKMMHTTQVTPH-----SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
A +I+ + + + + SD+ T T+ +T+ K A
Sbjct: 188 DAAASIAKLSRELQVASRSFQGEVGKFSDTAVTIQRATNELTATTKQTAAQINTTAGDFS 247
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + D + + T E ++ ++ S + L+N
Sbjct: 248 TTAKQAGKLINNLDDLLTTNRSALVSTLNNINETSNQLRQTVNALSPAVTRLTQGDILKN 307
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ ++N + ++++ + + I ++ + + ++ S ++ ++
Sbjct: 308 LEILSANAAEASISLKDASKTLADPKN-IVLLQQTLDAARVTFENTQKITSDLDELTGDP 366
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRY------IPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+ ++ ++ + + SI ++ S ++ + +
Sbjct: 367 KFRQNLLQLVNGLNKLLSSTGDMQEQTKVALTLDSIKLSINQGSSQSKSETTSDLG---- 422
Query: 418 TVNHFDDCLNNFERNPQDIV 437
V++ E+ +V
Sbjct: 423 -VSNHGVKAEKLEKQENRVV 441
>gi|229494577|ref|ZP_04388340.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318939|gb|EEN84797.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 340
Score = 91.5 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 86/296 (29%), Gaps = 6/296 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + +F V + S+ V GL + VR G+
Sbjct: 3 RPTTVKLLIFTVVMAVIFAGLAIVFSQVRFSSSNGFHAT---FSDVSGLKSGDKVRIAGV 59
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + G+ + N + + + L ST AT+R + L G Y+EL +T
Sbjct: 60 PVGSVTGVSI--GDSNQAEVEFDVDTKYSLMKSTKATVRYENLVGDRYMELLEGAGSTET 117
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + + + + + +++ ++ T ++ +
Sbjct: 118 LPSGGSIPVDQTSPALDLDLLLGGFKPLLRSLDP-QQVNDLSGALLQVLQGQGGTLVSLL 176
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S+ + + + N + + + + I
Sbjct: 177 GNTSSFTSTLADRDQLIGDVITNLNDVLGTINDKGDQFSTTIDQLQQLVSGLAKDSGPIG 236
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+I + + + T D++ ++D D ++ + +
Sbjct: 237 NSITEIAGATGDLASLLQATRPDIQTLIGETNRTMTQLDLGKDDINTALDRLPSDY 292
>gi|307718420|ref|YP_003873952.1| hypothetical protein STHERM_c07210 [Spirochaeta thermophila DSM
6192]
gi|306532145|gb|ADN01679.1| hypothetical protein STHERM_c07210 [Spirochaeta thermophila DSM
6192]
Length = 327
Score = 91.5 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 1 MESKNYYT--SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ K + VGLFV+ L + L + ++ + G+ +
Sbjct: 1 MKFKIRFASQIVGLFVLGGLVALVGVLILLGVNQRWFSKNYHFYTYFSET-HGIKPGMGI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+F G +G++ + LD++ R +Y + + + L + +
Sbjct: 60 QFKGFAIGKVTDITLDEDNRVKVFLYIEDRFYDKVYEDSVLAVVSNPLGLGGGLVFYQGK 119
Query: 119 KEKKTIFQIATERN 132
+ + + +
Sbjct: 120 TPTPPLPEGSLIPS 133
>gi|83855411|ref|ZP_00948941.1| paraquat-inducible protein, putative [Sulfitobacter sp. NAS-14.1]
gi|83843254|gb|EAP82421.1| paraquat-inducible protein, putative [Sulfitobacter sp. NAS-14.1]
Length = 700
Score = 91.5 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/413 (10%), Positives = 131/413 (31%), Gaps = 27/413 (6%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LDQEYPNHSLAKALIRPDTPLYPSTT 98
+ + +V GL+ + V +G+ +G + L +D + S + +
Sbjct: 302 INVIFDENVSGLAVGAPVELSGLNIGEVDTLAGIVDYDQFGDSRVRLNVTLAIQ-PARLG 360
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ + +++ + + + + + A + +
Sbjct: 361 LPGEVSAESALAFLQDRVVNGLRARLASASLLTGGLKVELVVVEDAPNGRLVAAGENFPV 420
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+++ T+ A N I++++++ +S + +
Sbjct: 421 MPTTK------------NETSDAAATVEGVFSRINNLPIEELLNSAIGLMNSLQAFVGSD 468
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ + +I + + ++NI VS N + + ++ T+ + + + +
Sbjct: 469 ELQQTPRDVRTLINEVTGLVSSDEVQNIPVSLNATLLRVETLVATLEE-EQMARRLLDAV 527
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
+ + FS+ + + ++ + E+T + I T + +
Sbjct: 528 DSVSEAATSFSTSTEGVPELVEEMQAVAAKASELELQQLVDELTALTRSADQVIGTPDAV 587
Query: 339 T--SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN 396
+L ++ + + ++ A++ N A+ A +++ + + + +
Sbjct: 588 ALPGSLKNALDELNYTLQELREGGAVENVNQTLASARNAADNIAVSAQDLPQIVNRLSTL 647
Query: 397 LQNF---------SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
Q +R +Q+ + ERNP ++ GR
Sbjct: 648 FTQAERTIEGYNKGDQISRTAQETMRDIQKAADALASLARTIERNPNSLLLGR 700
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 47/449 (10%), Positives = 129/449 (28%), Gaps = 42/449 (9%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA-------LIRPDTP 92
+ I +G L+ D+ + + GI VGR+ + + LI T
Sbjct: 170 LQIAFRTVGNGTLTDDAPIMYRGIEVGRLGKAEIAPRGNFAIVEALIYEEHRNLINSSTR 229
Query: 93 LYPS-----------------TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ S + AT+ G+ T++ ++ ++ + R+
Sbjct: 230 FWDSSGFSLSLGPGGAEIDFQSIATLIGGGVTFDTFVSGGDRVQDGTVFDIFPSKEDARS 289
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
+ I+ + + ++ NI + T ++
Sbjct: 290 AVFNASEVEPLLINVIFDENVSGLAVGAPVELSGLNIGEVDTLAGIVDYDQFGDSRVRLN 349
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ P +++ + D + + + A + + V +
Sbjct: 350 VTLAIQPARLGLPGEVSAESALAFLQDRVVNGLRARLASASLLTGGLKVELVVVEDAPNG 409
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--SKMKSKETSAFLENIADSTSNMRS 313
+ T + ++ + S + + ++ L N +
Sbjct: 410 RLVAAGENFPVMPTTKNETSDAAATVEGVFSRINNLPIEELLNSAIGLMNSLQAFVGSDE 469
Query: 314 SISAIREITDQRQKIISTINTIE--NITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
R++ ++ +++ E NI +LN + + L++ + +
Sbjct: 470 LQQTPRDVRTLINEVTGLVSSDEVQNIPVSLNATLLRVETLVATLEEEQMARRLLDAVDS 529
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN----------- 420
A +F ++E + + + S+ L + + + L + +
Sbjct: 530 VSEAATSFSTSTEGVPELVEEMQAVAAKASELELQQLVDELTALTRSADQVIGTPDAVAL 589
Query: 421 --HFDDCLNNFERNPQDIVWGREKGSVKI 447
+ L+ Q++ G +V
Sbjct: 590 PGSLKNALDELNYTLQELREGGAVENVNQ 618
Score = 44.9 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 44/463 (9%), Positives = 117/463 (25%), Gaps = 49/463 (10%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
V + + L + + VI G+ + +R+ + VGR
Sbjct: 29 IVWIIPILALVAALGVAF------NSYNSRGPVIFVEFDKGAGIKAGETELRYRDVTVGR 82
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + +A + + + +A+ +
Sbjct: 83 VEEVGFT-TGLGKVVASIRVDKNVAPFIDASASFWIVQPEVSAQGISGLGTVLSGVYIEG 141
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + + A + +I+ + + ++ +
Sbjct: 142 SWNDEVGDFAERFVGSDSPPLIRAGQSGLQIAFRTVGNGTLTDDAPIMYRGIEVGRLGKA 201
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKN------TFNTITDLITSLDKMIKAIDLQKVNQ 241
+ I + + + + S ++ +D A +
Sbjct: 202 EIAPRGNFAIVEALIYEEHRNLINSSTRFWDSSGFSLSLGPGGAEIDFQSIATLIGGGVT 261
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + + D R EV + +++ D + + L
Sbjct: 262 FDTFVSGGDRVQDGTVFDIFPSKEDARSAVFNASEVEPLLINVIFDENVSGLAVGAPVEL 321
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK----------FAE 351
+ + + I + D R ++ T+ + S +
Sbjct: 322 SGLNIGEVDTLAGIVDYDQFGDSRVRLNVTLAIQPARLGLPGEVSAESALAFLQDRVVNG 381
Query: 352 LMSKINN----------------------ISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
L +++ + + A EN + + T E +
Sbjct: 382 LRARLASASLLTGGLKVELVVVEDAPNGRLVAAGENFPVMPTTKNETSDAAATVEGVFSR 441
Query: 390 IPSI-GNNLQNFSQSGLNDIQNLV--RKLQETVNHFDDCLNNF 429
I ++ L N + +N +Q V +LQ+T +N
Sbjct: 442 INNLPIEELLNSAIGLMNSLQAFVGSDELQQTPRDVRTLINEV 484
>gi|113461314|ref|YP_719383.1| hypothetical protein HS_1171 [Haemophilus somnus 129PT]
gi|112823357|gb|ABI25446.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 168
Score = 91.5 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ VGLF++ + F ++ ++ + + + ++ GL + ++ G+ +
Sbjct: 7 HEFWVGLFLLIGIGALVFLGLRVANIQGFNQAKSYQVYAVFDNIGGLKVRAPLKVGGVVI 66
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
GR+ + LD + L K I + +++ +I+T GL G YI LS
Sbjct: 67 GRVSSIELD-DKTYLPLVKIAIDEKYNEIPDNSSLSIKTSGLLGEQYISLSVGFD 120
>gi|167571489|ref|ZP_02364363.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia oklahomensis C6786]
Length = 177
Score = 91.5 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL + V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKLKFDNIGGLKPRAPVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 63 AGVVVGRVGSIGFDTNTY-QALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLEPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|120401163|ref|YP_950992.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119953981|gb|ABM10986.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 343
Score = 91.5 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/296 (15%), Positives = 86/296 (29%), Gaps = 9/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G F + +L F+ I + I S GL VR
Sbjct: 1 MKITGTAIKLGAFSLVLLMFTAIIIVVFGQMRFDRTTGYS---AIFSSASGLRPGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ G+ L E + + L+ +TA+IR L G Y+EL+
Sbjct: 58 SGVEVGKVKGVELI-EGGSKVRVDFNVDRSLELFDESTASIRYLNLIGDRYLELARGESN 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIEKP 175
+ + + I F E + Q I
Sbjct: 117 TRMAAGGTIPIERTQPALDLDALIGGFRPVFQSLEPEKVNTIAQSIITVFQGQGGTINDI 176
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L T + ++ I + T + +++ + K
Sbjct: 177 LDQTASLTSALADRDQAIGEVITNLNTVLDTTVRHQQEFDDTVKNFEVLITGLKNRADPI 236
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
V I + + + + +TV + Q + +++ LL
Sbjct: 237 ATSVADISDAAGTIGDLLADNRPLLKDTVSKLEILNQPLVDQRDQLNDLLVKLPDA 292
>gi|221069029|ref|ZP_03545134.1| Mammalian cell entry related domain protein [Comamonas testosteroni
KF-1]
gi|220714052|gb|EED69420.1| Mammalian cell entry related domain protein [Comamonas testosteroni
KF-1]
Length = 169
Score = 91.5 bits (224), Expect = 2e-16, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K VGLFV+ F + + I ++ GL ++V+
Sbjct: 1 MQQKKSDVWVGLFVLIGALALVFLALQSANLLSLNFQKTYAITARFDNIGGLKPKAAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGRI + + + + + ++ I T GL G YI +
Sbjct: 61 AGVVVGRIESITFN-DQTFQADVAMSMENRYAFPKDSSLKILTSGLLGDQYIGIEAG 116
>gi|260174143|ref|ZP_05760555.1| hypothetical protein BacD2_19934 [Bacteroides sp. D2]
gi|315922408|ref|ZP_07918648.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313696283|gb|EFS33118.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 297
Score = 91.5 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 93/290 (32%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIVALCVLIYGINWLKGIHMFQPSSYFY--AKFENVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + ++ D P + + + + + + +TA + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIYYDYVKPGNVIVEVELDTELRIPKGSTAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K T + + + + + +
Sbjct: 119 EKYAV------GDTIPGTLNNGMMESAAQLIPKVEEMLPKLDSILISLNNILGDKSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T +S K + + + +S + + +L ++ A +K++
Sbjct: 173 LHSIEKTTANLAVVSSQVKGLMSNDIPQLTSKLNTIGDNFVVISGNLKEIDYAATFKKID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L N+++ + + + +D + LL D
Sbjct: 233 ETLANVKILTEKLNSKDNTLGLLFNDP-TLYNNLNATTENAASLLEDLKE 281
>gi|120405555|ref|YP_955384.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958373|gb|ABM15378.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 346
Score = 91.5 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 4/128 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ +G+F+ L F + ++ +V GL VR G+
Sbjct: 9 RHDALRLGVFLTVCLVGVFGLFAVFGQM-RFGEKTHSYKAAFS-NVTGLENGDFVRIAGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + + + +L + L + A IR L G Y+ L T
Sbjct: 67 EVGQVKKVAIQPDTT--ALVEFTADQSVVLTEGSRAVIRYDDLIGGRYLALQEGAGATTT 124
Query: 124 IFQIATER 131
+ T
Sbjct: 125 LKPGETIP 132
>gi|315185560|gb|EFU19329.1| Mammalian cell entry related domain protein [Spirochaeta
thermophila DSM 6578]
Length = 327
Score = 91.5 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 1 MESKNYYT--SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ K + VGLFV+ L + L + ++ + G+ +
Sbjct: 1 MKFKIRFASQIVGLFVLGGLVALVGVLILLGVNQRWFSKNYHFYTYFSET-HGIKPGMGI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+F G +G++ + LD++ R +Y + + + L + +
Sbjct: 60 QFKGFAIGKVTDITLDEDNRVKVFLYIEDRFYDKVYEDSVLAVVSNPLGLGGGLVFYQGK 119
Query: 119 KEKKTIFQIATERN 132
+ + + +
Sbjct: 120 TPTPPLPEGSLIPS 133
>gi|121534947|ref|ZP_01666766.1| Mammalian cell entry related domain protein [Thermosinus
carboxydivorans Nor1]
gi|121306546|gb|EAX47469.1| Mammalian cell entry related domain protein [Thermosinus
carboxydivorans Nor1]
Length = 424
Score = 91.5 bits (224), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/381 (12%), Positives = 105/381 (27%), Gaps = 12/381 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VG + LF + I L + + V + V GL + VR+ G+
Sbjct: 4 STEAKVGAVTIVGLFLLAYMIVHLGGFS-FSDKGYPVTVTFNQ-VSGLKEGNIVRYAGVE 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VGR+ + + E LI P + TI T GL G +I + +
Sbjct: 62 VGRVQEVAVVPEG---VKVHLLINPGVKIPQGAQFTIGTDGLLGEKFINILPPATNSGFL 118
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
A R + + K + +K+ +++ L
Sbjct: 119 SPGAHVRGEDPQGLDQLIATADRVLLDIQALVKSLNEVLGDEKVKGAMKEALLNAREITN 178
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ + A+ Q T + + + + + + E
Sbjct: 179 HLNELSASMARMAKNSEGDIQDTVRNLRTMSGSLRDVAARVDRLMTEVDNNGRTAKDLRE 238
Query: 245 NIQVSSNNFVKSSDQVINTVH--DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
I+ + + ET + +E + + + +
Sbjct: 239 TIENLKTTSARVEKMAASLEGVVTDPETARNLKETLRNAREASEKANRMLGKVNSVKAEA 298
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS-----QKFAELMSKIN 357
I + ++ Q + + +I + + A I+
Sbjct: 299 GIEMLYDTDNHKYRSSADVRIQTSPRDFAVIGVSDIGDGSKTNFQVGRGESLAGRAGVID 358
Query: 358 NISALKENNSLFKDAQRAMHT 378
+ + + L + + ++
Sbjct: 359 GKAGIGLDAKLGQQLRLSLDA 379
>gi|87120455|ref|ZP_01076349.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Marinomonas sp. MED121]
gi|86164098|gb|EAQ65369.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Marinomonas sp. MED121]
Length = 153
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VGLFVV + +S + I + GL+ + V
Sbjct: 1 MKSKQLELMVGLFVVLGFAALAYLAIQVSGLSGASSKDVYQIQARFDDIGGLTERAKVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG + + LD+E +L I D + ++ I T GL G Y+ +S +
Sbjct: 61 AGVTVGEVDSIVLDKELY-MALVTFNIYSDVQNIPTDSSFAILTNGLLGEKYVGVSIGAE 119
Query: 120 EKKTIFQIATERNQ 133
E+ Q
Sbjct: 120 EEYLEQGGEIYDTQ 133
>gi|160885206|ref|ZP_02066209.1| hypothetical protein BACOVA_03204 [Bacteroides ovatus ATCC 8483]
gi|237714831|ref|ZP_04545312.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|237720014|ref|ZP_04550495.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|262406897|ref|ZP_06083446.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294643067|ref|ZP_06720906.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294807804|ref|ZP_06766594.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|298479864|ref|ZP_06998064.1| mce family protein [Bacteroides sp. D22]
gi|156109556|gb|EDO11301.1| hypothetical protein BACOVA_03204 [Bacteroides ovatus ATCC 8483]
gi|229445156|gb|EEO50947.1| conserved hypothetical protein [Bacteroides sp. D1]
gi|229450566|gb|EEO56357.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|262355600|gb|EEZ04691.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292641586|gb|EFF59765.1| conserved hypothetical protein [Bacteroides ovatus SD CC 2a]
gi|294445001|gb|EFG13678.1| conserved hypothetical protein [Bacteroides xylanisolvens SD CC 1b]
gi|298274254|gb|EFI15815.1| mce family protein [Bacteroides sp. D22]
Length = 297
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 93/290 (32%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIVALCVLIYGINWLKGIHMFQPSSYFY--AKFENVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + ++ D P + + + + + + ++A + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIYYDYAKPGNVIVEVELDTELRIPKGSSAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K T + + + + + +
Sbjct: 119 EKYAV------GDTIPGTLNNGMMESAAKLIPKVEEMLPKLDSILISLNNILGDKSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T +S K + + + +S + + +L ++ A +K++
Sbjct: 173 LHSIEKTTANLAVVSSQVKGLMSNDIPQLTSKLNTIGDNFVVISGNLKEVDYAATFKKID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L N+++ + + + +D + LL D
Sbjct: 233 ETLANVKILTEKLNSKDNTIGLLFNDP-TLYNNLNATTENAASLLEDLKE 281
>gi|111023086|ref|YP_706058.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110822616|gb|ABG97900.1| possible MCE family protein [Rhodococcus jostii RHA1]
Length = 684
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 5/136 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +N + +F V + + + L +G G++ S V
Sbjct: 1 MSVRNSAIKLAIFGVLGILSAVLVVNTLRV--PVEGQTVTYKALFTD-AQGVTPGSDVTI 57
Query: 61 NGIPVGRIVGLFL-DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + + D + +L ++ D L TT IR L G+ Y++L+
Sbjct: 58 AGVRVGRVDSIDIVDGDAGSATALVDFEVQRDQELPADTTVAIRYGDLLGVRYLDLAAGP 117
Query: 119 KEKKTIFQIATERNQR 134
++ T+ + T R
Sbjct: 118 SDEGTLEEGDTIPLDR 133
Score = 56.9 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/259 (11%), Positives = 86/259 (33%), Gaps = 7/259 (2%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + + GL+ V G+P GR+ G+ L + H + + +
Sbjct: 388 SFAVRTDGYTAEL-ANAAGLTDSDYVYVAGVPAGRVTGVDLAGD---HVVVHFRLDGERH 443
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
L +T+A ++ + G Y++++ + R+ + G + + E
Sbjct: 444 LGSTTSAGVKLSTILGKRYLDVAPSGPGDLGDDGVIPLRHTSVPYSLDDIGSSAIETADE 503
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ + + + +A + ST+LA N + +++ ++ +D
Sbjct: 504 LDLGGLQKMLAVVTETLPQDANLNREALAGVSAASTILAKNADQVTQLLDSS---RTLTD 560
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ ++ + I + + ++S + ++
Sbjct: 561 VLVGQQGQLTTLLGNADVVMNTLATRRAAIRQMVDDLQGLVAQASQFLGENTAELDSLLV 620
Query: 273 TFQEVGQKIDHLLSDFSSK 291
++V ++ L++ +
Sbjct: 621 NARQVTDRLQANLANLDAL 639
>gi|299147891|ref|ZP_07040954.1| mce related protein [Bacteroides sp. 3_1_23]
gi|298514074|gb|EFI37960.1| mce related protein [Bacteroides sp. 3_1_23]
Length = 297
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/287 (9%), Positives = 83/287 (28%), Gaps = 9/287 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIVALCVLIYGINWLKGIHMFQPSSYFY--AKFENVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + ++ D P + + + + + + ++A + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIYYDYAKPGNVIVEVELDTELRIPKGSSAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMIT-------ATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+K + + + + + I + +
Sbjct: 119 EKYAVGDTIPGTLNNRMMESAAKLIPKVEEMLPKLDSILISLNNILGDKSIPATLHSIEK 178
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + + + + K+ S + + + +
Sbjct: 179 TTANLAVVSSQVKGLMSNDIPQLTSKLNTIGDNFVVISGNLKEVDYAATFKKIDETLANV 238
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
L + +N N + + T + + +E ++
Sbjct: 239 KILTEKLNSKDNTIGLLFNDPTLYNNLNATTENAASLLEDLKEHPKR 285
>gi|170717849|ref|YP_001784908.1| hypothetical protein HSM_1588 [Haemophilus somnus 2336]
gi|168825978|gb|ACA31349.1| Mammalian cell entry related domain protein [Haemophilus somnus
2336]
Length = 168
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ VGLF++ + F ++ ++ + + + ++ GL + ++ G+ +
Sbjct: 7 HEFWVGLFLLIGIGALVFLGLRVANIQGFNQAKSYQVYAVFDNIGGLKVRAPLKVGGVVI 66
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
GR+ + LD + L K I + +++ +I+T GL G YI LS
Sbjct: 67 GRVSSIELD-DKTYLPLVKIAIDEKYNEIPDNSSLSIKTSGLLGEQYISLSVGFD 120
>gi|256828279|ref|YP_003157007.1| Mammalian cell entry related domain protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577455|gb|ACU88591.1| Mammalian cell entry related domain protein [Desulfomicrobium
baculatum DSM 4028]
Length = 337
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 50/314 (15%), Positives = 103/314 (32%), Gaps = 12/314 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S SVGLF+ + L + ++ WL + + SV GL DS V++
Sbjct: 1 MASARVNFSVGLFMTAGLALATLAVIWLG-MTSFLRKGELFVTYFDESVQGLGVDSPVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP----STTATIRTQGLAGITYIELST 116
G+PVGR+ + + + + LI + + A I G+ G ++E+
Sbjct: 60 RGVPVGRVQAIRIAPD-YHLIEVVILIDDEHADDENRFVDSVAAISNVGITGAMFVEIDK 118
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ +I + PS I + + KI +
Sbjct: 119 RGPLAHDFSPRLGFTPEYPVIASRPSDIKKLFREIDEIAMKIQSIDFKGISDQAMLAFAT 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT------FNTITDLITSLDKM 230
T+ + A+ + + + S +KN T+ +
Sbjct: 179 MNTVMTEAQFGAISADIRTLLASINAAANPKRLESMAKNMEQTVIASRTLMNTAAEELTR 238
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ I +Q + I N + + + ++ T ++ I L + ++
Sbjct: 239 LDTILVQFQSMIEANRPHVDTAMNALASTALKADVVMTQSHATVFQMQGAIKDLEARMAA 298
Query: 291 KMKSKETSAFLENI 304
++ E ++ N
Sbjct: 299 TAENLEQTSSNLNT 312
>gi|224588221|gb|ACN58845.1| ABC transporter permease component [uncultured bacterium BLR12]
Length = 335
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/330 (12%), Positives = 92/330 (27%), Gaps = 7/330 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
GLFV+ + ++ + ++ V GL S+V ++G+ VG
Sbjct: 10 ILTGLFVIVGIGILLAGVFIIGGKDKSFKKSVTANAVFSD-VSGLGKGSNVWYSGVKVGT 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
+ + I D + T + + GL G I L I
Sbjct: 69 VKKVGFVANG---VEVSFSIEEDVQQKIRKDTKVKLGSDGLIGNKIIVLYGGTPASPEIE 125
Query: 126 QIATERNQRAM-ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
T + + + + + N + + + S+ + + K L
Sbjct: 126 SGNTLQVENGVGTEEMMATLQGNNKNLLDITNDLKVVSKQLASGNGTVGKLLNDETIVNS 185
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+T+ A N + + + T+ ++ S N + DL T + +
Sbjct: 186 LQATLAALNRAGNNAQVLTSNLSVFSKKLNNKGYLLNDLATDTTIVASLRQTVAQLNQVS 245
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
S + ++ + + ++ + + + + K + +
Sbjct: 246 LSANSLVENLNATTAKLTSNKGPVGVLLNDEKAAANLQNTFVNLEAGSKKLDDNMEAMQH 305
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINT 334
E + ST
Sbjct: 306 NFLLRGFFKKRDKAEEKRIKDSIKNSTSAN 335
>gi|325579008|ref|ZP_08148964.1| toluene tolerance efflux ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus parainfluenzae
ATCC 33392]
gi|325159243|gb|EGC71377.1| toluene tolerance efflux ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus parainfluenzae
ATCC 33392]
Length = 168
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGIAALVFLGLRVANVQGFGETKSYTVTATFDNIGGLKVRAPLKLGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
R+ + LD++ I + + +++ +I+T GL G YI L+
Sbjct: 68 RVSDITLDEKSY-LPKVSIAINEEYKEIPENSSLSIKTSGLLGEQYIALTMGFD 120
>gi|91225578|ref|ZP_01260652.1| putative ABC superfamily transport protein [Vibrio alginolyticus
12G01]
gi|269967997|ref|ZP_06182035.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|91189698|gb|EAS75972.1| putative ABC superfamily transport protein [Vibrio alginolyticus
12G01]
gi|269827354|gb|EEZ81650.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 162
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKTELWVGSFVLAGICAILVMIFQVADVKSIGSGDTYTLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +GR+ + L+ + I +++ I T GL G YI L
Sbjct: 64 VVIGRVSSISLNPDNLLPV-VTLSINSKYNQFPETSSVQILTSGLIGEQYIGLVPGFVFD 122
Query: 122 KTIFQIATER 131
+ + +
Sbjct: 123 DEVMLVDGDT 132
>gi|110677492|ref|YP_680499.1| paraquat-inducible protein B, putative [Roseobacter denitrificans
OCh 114]
gi|109453608|gb|ABG29813.1| paraquat-inducible protein B, putative [Roseobacter denitrificans
OCh 114]
Length = 693
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/412 (9%), Positives = 120/412 (29%), Gaps = 23/412 (5%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LDQEYPNHSLAKALIRPDTPLYPST 97
EV + ++ GL+ + V +G+ +G + L +D E S +
Sbjct: 294 EVRVIFDENISGLTLGAPVELSGLRIGSVENLSGVVDPETYGDSRVRLAAVLGIQPARLG 353
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T A + E + + + P + E + +
Sbjct: 354 LPEEVTPQSALMLLEEQVRNGLRARLASTSILTGGLKVELVQLPDAPPALVEVFEGSIPR 413
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + I ++E T + + + T++ +
Sbjct: 414 MPTAPSEISDAAASVEGVFTRINRLPIEEVLTSVTDFLRAAENLLTSEDLRAAPQDLRGL 473
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ + + V + + ++ + +++ ++
Sbjct: 474 LGDIRGVVTSQTVQDIPVTLNVALVRLDGILAQIEEQQGVARILASIDAATSAATAVGTS 533
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
+ + L+++ + + + T + S+ + + + ++
Sbjct: 534 IEGLPDLVTELAGVAAEAASLPLADLTQQVTDVLASADA------------VVSAPAMQE 581
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ ++L + + ++++ A+ N+ + + A +++ + + I
Sbjct: 582 LPASLAGALDELNRTLAELREGGAVDNVNATLRSTRNAADAVALSAQDLPDLVDRITQVF 641
Query: 398 QNFSQSGL---------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
S + D Q +R + + N ERNP ++ GR
Sbjct: 642 DEASATIAGYNRGEVLSRDAQAALRDISQASNAISSLARLLERNPSALIRGR 693
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 34/435 (7%), Positives = 111/435 (25%), Gaps = 41/435 (9%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT------------- 98
LS D+ + + GI +GR+ + E + P L +T
Sbjct: 175 LSADTPILYRGIEIGRVGPARISPEGNFAIAEAVIYEPHGRLITPSTRFWDASGFSFTIG 234
Query: 99 -----------ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
A++ G+ T++ + +E + R +
Sbjct: 235 PAGAEIDFTSVASLLGGGITFDTFVSGGEQVGDGSVFEVFPSETDARNSVFNASEVDLLE 294
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + + ++ I + ++ + +
Sbjct: 295 VRVIFDENISGLTLGAPVELSGLRIGSVENLSGVVDPETYGDSRVRLAAVLGIQPARLGL 354
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
P ++ + + + + + A + + + + ++ +
Sbjct: 355 PEEVTPQSALMLLEEQVRNGLRARLASTSILTGGLKVELVQLPDAPPALVEVFEGSIPRM 414
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ ++ + + + + ++ + + + + + S +
Sbjct: 415 PTAPSEISDAAASVEGVFTRINRLPIEEVLTSVTDFLRAAENLLTSEDLRAAPQDLRGLL 474
Query: 328 IISTINTIENITSNL----NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTS 383
++ N + + ++++I + + A A +
Sbjct: 475 GDIRGVVTSQTVQDIPVTLNVALVRLDGILAQIEEQQGVARILASIDAATSAATAVGTSI 534
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRK-------------LQETVNHFDDCLNNFE 430
E + + + + L D+ V +QE L+
Sbjct: 535 EGLPDLVTELAGVAAEAASLPLADLTQQVTDVLASADAVVSAPAMQELPASLAGALDELN 594
Query: 431 RNPQDIVWGREKGSV 445
R ++ G +V
Sbjct: 595 RTLAELREGGAVDNV 609
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 34/97 (35%), Gaps = 8/97 (8%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGI 63
+ + V + L + F + + VI + G+ + VRF +
Sbjct: 18 SNLSIVWIIPALALVTALFVAWQSYNARG------PVITVEFENAAGIVPRETEVRFRDV 71
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
VG + + E + +AK + Y +TA+
Sbjct: 72 QVGLVEEVMFS-EGLSSVVAKVRLDKSVAPYVDSTAS 107
>gi|301060725|ref|ZP_07201540.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300445122|gb|EFK09072.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 146
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 48/117 (41%), Gaps = 4/117 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLF++ + + L + EV + G+ + SSV
Sbjct: 1 MRKFDLELCVGLFMILGILCLGYLSIKLGKLEVLGSQGYEVEAVFS-NGGGIKSGSSVVI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + L Y + + + + A+I+T+GL G YIE++
Sbjct: 60 AGVEIGRVKQVNL---YDYQARVVMDLPLNVKIQEDAIASIKTRGLIGDKYIEITPG 113
>gi|183984023|ref|YP_001852314.1| MCE-family protein Mce3B_1 [Mycobacterium marinum M]
gi|183177349|gb|ACC42459.1| MCE-family protein Mce3B_1 [Mycobacterium marinum M]
Length = 343
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ +G F++ + ++ + +V GL + V
Sbjct: 1 MRARLIRDAIRLGTFLLVCFLGVIGLFAVFGQL-RFGEKTSTYKAEFS-NVTGLEQNDFV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ + + + +L + L + A IR L G Y+ L
Sbjct: 59 RIAGVEVGQVKKVAIQPDTT--ALVEFTADSSVVLTQGSRAVIRYDDLIGGRYLALEEGA 116
Query: 119 KEKKTIFQIATERNQ 133
K + T
Sbjct: 117 GSPKQLKPGDTIPMT 131
>gi|167826075|ref|ZP_02457546.1| mce family protein [Burkholderia pseudomallei 9]
gi|167896160|ref|ZP_02483562.1| mce family protein [Burkholderia pseudomallei 7894]
Length = 167
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|300784336|ref|YP_003764627.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793850|gb|ADJ44225.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 345
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ L V +++ F I + +N G + + + GL VR G+ VG++
Sbjct: 8 LIKLAVFAVVTVLFTGILAATIANTDFGETSGYLAKFTD-ASGLKEGDDVRIAGVKVGQV 66
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + N + + + L + TATI+ + L G Y+ L T K + +
Sbjct: 67 DTIEVVEGERNLAEVRFDVEHAYRLPETVTATIKYRNLVGQRYLALGTDVPGDKALPEGG 126
Query: 129 TERNQRAMI 137
T +R
Sbjct: 127 TIPPERTKP 135
>gi|312138211|ref|YP_004005547.1| mce family protein mce2b [Rhodococcus equi 103S]
gi|325674883|ref|ZP_08154570.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|311887550|emb|CBH46862.1| putative Mce family protein Mce2B [Rhodococcus equi 103S]
gi|325554469|gb|EGD24144.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 339
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 40/309 (12%), Positives = 85/309 (27%), Gaps = 11/309 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + +F + S+ GL + VR G+
Sbjct: 2 RATTVKLLIFATVMALIFAGLAIVFSQFRFSSSDGYHATFA---DASGLKSGDKVRIAGV 58
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + + +D + H+ K + L ST AT+R + L G Y+EL + +
Sbjct: 59 PVGSVKSVDVDDDN--HAEIKFSVDSQYTLLSSTKATVRYENLVGDRYLELLEGQGSVEP 116
Query: 124 IFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLT 177
+ ++ + + + + + Q + L
Sbjct: 117 LRAGGAIPLEQTAPALDLDLLLGGFKPLLRGLDPKQVNDLSAALLQVFQGQGGTLVSLLG 176
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+T + T++ I + D +T + S + +
Sbjct: 177 STSSFTNTLADRDQLIGEVITNLNTVLGTINDKGDQFSTTVDQLQQLVSGLAQDRGPIGE 236
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ QI + ++ + + + T ID LS + K
Sbjct: 237 AIPQIADATGSLASLLQGTRPDIQAMIEQTNRTANQLVLGQDDIDKSLSRLPTDYKKLIR 296
Query: 298 SAFLENIAD 306
+
Sbjct: 297 VGSYGDFFQ 305
>gi|118619128|ref|YP_907460.1| MCE-family protein Mce3B_1 [Mycobacterium ulcerans Agy99]
gi|118571238|gb|ABL05989.1| MCE-family protein Mce3B_1 [Mycobacterium ulcerans Agy99]
Length = 343
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 44/135 (32%), Gaps = 6/135 (4%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ +G F++ + ++ + +V GL + V
Sbjct: 1 MRARLIRDAIRLGTFLLVCFLGVIGLFAVFGQL-RFGEKTSTYKAEFS-NVTGLEQNDFV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ + + + +L + L + A IR L G Y+ L
Sbjct: 59 RIAGVEVGQVKKVAIQPDTT--ALVEFTADSSVVLTQGSRAVIRYDDLIGGRYLALEEGA 116
Query: 119 KEKKTIFQIATERNQ 133
K + T
Sbjct: 117 GSPKQLKPGDTIPMT 131
>gi|297569268|ref|YP_003690612.1| Mammalian cell entry related domain protein [Desulfurivibrio
alkaliphilus AHT2]
gi|296925183|gb|ADH85993.1| Mammalian cell entry related domain protein [Desulfurivibrio
alkaliphilus AHT2]
Length = 148
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 2/117 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLFV++ F + L + G++ GL + V
Sbjct: 1 MNNVKLDLVVGLFVLAGFFSFVYLSVQLGDFAPLSKRQQYQLQAEFGNISGLRRGAVVEI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + L + +L I L + A+++TQG+ G YI +S
Sbjct: 61 AGVGVGRVGAIELSE--RQRALVTLYIDRAVELSEDSIASVKTQGIIGEKYISISPG 115
>gi|237726608|ref|ZP_04557089.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|265752119|ref|ZP_06087912.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|229435134|gb|EEO45211.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
gi|263236911|gb|EEZ22381.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
Length = 295
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 84/284 (29%), Gaps = 8/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL ++ L F I +L N + + +++GL+ S V NG VG
Sbjct: 4 EVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEY--TNINGLAGSSPVFANGYKVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + P H + + + + + + T+ L + L +
Sbjct: 62 TVRNINYNYAKPGHVTVEVEVDKEMRIPKGSAGELVTEMLGTVKMNLLLNFNSTEYYQPG 121
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
A + + + + + + + P +
Sbjct: 122 DTLPGKTNAGLMG-----AAEEKLVPQIEQMLPKMDSILHSLNKILADPALGATLHNAEK 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T + + ++ + + + + +L + A K++ L N+
Sbjct: 177 LTANLDATTRQLNILMQRDLPQLTGKLNTIADNFITISDNLKGIDYASTFNKIDSTLYNV 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
Q+ + + + + +D Q LL D +
Sbjct: 237 QMLTEKLNRKDNSIGLLFNDP-TFYQNLSATTANAATLLEDLKA 279
>gi|212691083|ref|ZP_03299211.1| hypothetical protein BACDOR_00573 [Bacteroides dorei DSM 17855]
gi|237712417|ref|ZP_04542898.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|212666315|gb|EEB26887.1| hypothetical protein BACDOR_00573 [Bacteroides dorei DSM 17855]
gi|229453738|gb|EEO59459.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
Length = 295
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 84/284 (29%), Gaps = 8/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL ++ L F I +L N + + +++GL+ S V NG VG
Sbjct: 4 EVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEY--TNINGLAGSSPVFANGYKVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + P H + + + + + + T+ L + L +
Sbjct: 62 TVRNINYNYAKPGHVTVEVEVDKEMRIPKGSAGELVTEMLGTVKMNLLLNFNSTEYYQPG 121
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
A + + + + + + + P +
Sbjct: 122 DTLPGKTNAGLMG-----AAEEKLVPQIEQMLPKMDSILHSLNKILADPALGATLHNAEK 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T + + ++ + + + + +L + A K++ L N+
Sbjct: 177 LTANLDVTTRQLNILMQRDLPQLTGKLNTIADNFITISDNLKGIDYASTFNKIDSTLYNV 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
Q+ + + + + +D Q LL D +
Sbjct: 237 QMLTEKLNRKDNSIGLLFNDP-TFYQNLSATTANAATLLEDLKA 279
>gi|227825162|ref|ZP_03989994.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226905661|gb|EEH91579.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 428
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 31/320 (9%), Positives = 91/320 (28%), Gaps = 8/320 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG + + +L + + ++ + +V+GL + VRF G+P+G
Sbjct: 16 EVKVGAVTLGGFVILALMLTFLGVFS-FASRQYKLNVIF-DNVNGLKVGNEVRFAGVPIG 73
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + +D + I + ++ I G+ G ++ ++ F+
Sbjct: 74 KVDDILVDG---SKVKVVMKIDQKQKVPRNSQFGIGMDGVMGTKFVTITPPEIATGVTFR 130
Query: 127 --IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE-KPLTTTIANI 183
+ S + E + S+ E T I
Sbjct: 131 EGETITGQTTGGVDKLMSSSGKVMEKLETVADAFSNVFGDKAVQKSMREGFVQTGEITKN 190
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
T ++ ++ V + + + +T + + + + +
Sbjct: 191 LNAFTKALAQMAQDNQGDIHAMVGQMKEMTVHMNSIMTQADNNGETGRNVALMAANMKDV 250
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ D++ T E +K + ++ + + ++
Sbjct: 251 SETIKETAASLQGVVTDPKVQDDLKITIHNAAETSEKANRVMGVVADARIRTDVMYRDKD 310
Query: 304 IADSTSNMRSSISAIREITD 323
++ +
Sbjct: 311 SKWRADIGAELPTSQNDFFY 330
>gi|121603598|ref|YP_980927.1| hypothetical protein Pnap_0687 [Polaromonas naphthalenivorans CJ2]
gi|120592567|gb|ABM36006.1| Mammalian cell entry related domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 169
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 55/153 (35%), Gaps = 1/153 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + + I ++ GL T +SVR
Sbjct: 1 MQRSKIDVWVGLFVLVGAAAILFLALQAANLLNLNFQPTYRITAEFDNIGGLKTKASVRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + + + + ++ ++ I T GL G YI + E
Sbjct: 61 GGVVVGRVEEISFN-DQTFQARVTLDMQGRYAFPKDSSLKILTSGLLGEQYIGIQAGGDE 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAEN 153
K + + Q A++ G F A+
Sbjct: 120 KNLVEGDVIRQTQSAVVLENLIGQFLFSKTADE 152
>gi|261855374|ref|YP_003262657.1| hypothetical protein Hneap_0761 [Halothiobacillus neapolitanus c2]
gi|261835843|gb|ACX95610.1| Mammalian cell entry related domain protein [Halothiobacillus
neapolitanus c2]
Length = 145
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 3/110 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG FV++ + S + ++ GL+ S ++ G+ +GR+
Sbjct: 2 VVGAFVLAGIAALLVLTLKWSDFGTSSVSGYTLTAEF-DNIGGLTDRSPIKMAGVTIGRV 60
Query: 69 VGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ +D +I L + A+I T GL G YIE+S
Sbjct: 61 SNIQIDPNTFEAV-VTMVISSQYDNLPKDSFASIYTAGLLGAQYIEISPG 109
>gi|254374663|ref|ZP_04990144.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151572382|gb|EDN38036.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 241
Score = 91.1 bits (223), Expect = 3e-16, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 82/241 (34%), Gaps = 3/241 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+ GLFV+ ++F F ++LS D + S+ GL+ S V +
Sbjct: 3 ENSIKNLIAGLFVIFMVFVMIFIGFFLSG-GFKDQHTTTFVTNFK-SISGLNVGSDVSYK 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKE 120
G +G++ + +++ P I P+Y T AT+++ G+ G + ++
Sbjct: 61 GFSIGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDEK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I ++ Q IT+ PS + ++ + + + S K++
Sbjct: 121 NTSLDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPENLDRFNQF 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I +N S + + + +
Sbjct: 181 TDSVNILLYNLSNSSIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPSTIVRGVDHK 240
Query: 241 Q 241
+
Sbjct: 241 E 241
Score = 44.9 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 84/247 (34%), Gaps = 12/247 (4%)
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ I ++ V ++ + + ++ + VS F
Sbjct: 4 NSIKNLIAGLFVIFMVFVMIFIGFFLSGGFKDQHTTTFVTNFKSISGLNVGSDVSYKGFS 63
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
I+ + + + ++ +I ++ T ++ +S
Sbjct: 64 IGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDEKNTS 123
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ I Q +I S + +E+I + ++ + E+ K N + + +
Sbjct: 124 LDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPEN---------- 173
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ F ++ +N + ++ N+ + L ++ + + QET+ ++ + E +P
Sbjct: 174 -LDRFNQFTDSVNILLYNLSNS-SIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPS 231
Query: 435 DIVWGRE 441
IV G +
Sbjct: 232 TIVRGVD 238
>gi|167627642|ref|YP_001678142.1| cell entry related family protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167597643|gb|ABZ87641.1| cell entry related family protein [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 243
Score = 91.1 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 78/218 (35%), Gaps = 3/218 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+ GLFV+ ++F F ++LS + + S+ GL+ S V +
Sbjct: 3 ENSIKNLIAGLFVIFMVFVMVFIGFFLSG-GFKNQDTTTFVTNFK-SISGLNVGSDVSYK 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKE 120
G +G++ + +++E P I P+Y T AT+++ G+ G + ++
Sbjct: 61 GFNIGKVSDISINKENPKLVSVYMKINSQIPIYKQTVATLQSVGITGQSKVELSLDISEK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I + + I + PS + ++ + + + S K++
Sbjct: 121 NTSLDLIDLRKGKIPEIKSKPSQLETILNKVNGIAGSLEEISGKFNKMMSQENIQRFNEF 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
A+ I +N S +
Sbjct: 181 ADSLNILLYNLSNSSIYFNRTLMNFNDTMLEGQETFSR 218
Score = 41.5 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 85/245 (34%), Gaps = 12/245 (4%)
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ I ++ V ++ + D + + ++ + VS F
Sbjct: 4 NSIKNLIAGLFVIFMVFVMVFIGFFLSGGFKNQDTTTFVTNFKSISGLNVGSDVSYKGFN 63
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
I+ + + + ++ +I ++ T ++ S +S
Sbjct: 64 IGKVSDISINKENPKLVSVYMKINSQIPIYKQTVATLQSVGITGQSKVELSLDISEKNTS 123
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ I + +I S + +E I + +N + E+ K N + + +
Sbjct: 124 LDLIDLRKGKIPEIKSKPSQLETILNKVNGIAGSLEEISGKFNKMMSQENIQR------- 176
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
F + ++ +N + ++ N+ + L + + + + QET + + ++ + +P
Sbjct: 177 ----FNEFADSLNILLYNLSNS-SIYFNRTLMNFNDTMLEGQETFSRLNRVISILDYDPS 231
Query: 435 DIVWG 439
IV G
Sbjct: 232 TIVRG 236
>gi|226304450|ref|YP_002764408.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183565|dbj|BAH31669.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 339
Score = 91.1 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 84/288 (29%), Gaps = 6/288 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + +F V + S+ V GL + VR G+
Sbjct: 2 RPTTVKLLIFTVVMAVIFAGLAIVFSQVRFSSSNGFHAT---FSDVSGLKSGDKVRIAGV 58
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + G+ + N + + + L ST AT+R + L G Y+EL +T
Sbjct: 59 PVGSVTGVSI--GDSNQAEVEFDVDTKYSLMKSTKATVRYENLVGDRYMELLEGAGSTET 116
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + + + + + +++ ++ T ++ +
Sbjct: 117 LSSGGSIPVDQTSPALDLDLLLGGFKPLLRSLDP-QQVNDLSGALLQVLQGQGGTLVSLL 175
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S+ + + + N + + + + I
Sbjct: 176 GNTSSFTSTLADRDQLIGDVITNLNDVLGTINDKGDQFSTTIDQLQQLVSGLAKDSGPIG 235
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+I + + + T D++ ++D D ++
Sbjct: 236 NSITEIAGATGDLASLLQATRPDIQTLIGETNRTMTQLDLGKDDINTA 283
>gi|118468987|ref|YP_884551.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118170274|gb|ABK71170.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 343
Score = 91.1 bits (223), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 48/136 (35%), Gaps = 4/136 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K +G+F + +L F+ + E +V GL VR
Sbjct: 1 MSIKGTLFKLGIFSLVLLTFTALIFVVFGQIR--FNRTTEYSAIFK-NVSGLRDGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L + K + PL+ TTA IR Q L G Y+EL +
Sbjct: 58 AGVEVGKVKSVDLI-NGGEQAEVKFTVERSLPLFQETTAAIRYQDLIGNRYLELKRGDSD 116
Query: 121 KKTIFQIATERNQRAM 136
+ +
Sbjct: 117 QILPPGSTIPVERTEP 132
>gi|187931807|ref|YP_001891792.1| hypothetical protein FTM_1117 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|187712716|gb|ACD31013.1| conserved hypothetical protein [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 241
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/241 (14%), Positives = 81/241 (33%), Gaps = 3/241 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+ GLFV+ ++F F ++LS D + S+ GL+ S V +
Sbjct: 3 ENSIKNLIAGLFVIFMVFVMIFIGFFLSG-GFKDQHTTTFVTNFK-SISGLNVGSDVSYK 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKE 120
G +G++ + +++ P I P+Y T AT+++ G+ G + +
Sbjct: 61 GFSIGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I ++ Q IT+ PS + ++ + + + S K++
Sbjct: 121 NTSLDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPENLDRFNQF 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + +N S + + + +
Sbjct: 181 TDSVNMLLYNLSNSSIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPSTIVRGVDHK 240
Query: 241 Q 241
+
Sbjct: 241 E 241
Score = 44.5 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 84/247 (34%), Gaps = 12/247 (4%)
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ I ++ V ++ + + ++ + VS F
Sbjct: 4 NSIKNLIAGLFVIFMVFVMIFIGFFLSGGFKDQHTTTFVTNFKSISGLNVGSDVSYKGFS 63
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
I+ + + + ++ +I ++ T ++ +S
Sbjct: 64 IGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAKNTS 123
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ I Q +I S + +E+I + ++ + E+ K N + + +
Sbjct: 124 LDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPEN---------- 173
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ F ++ +N + ++ N+ + L ++ + + QET+ ++ + E +P
Sbjct: 174 -LDRFNQFTDSVNMLLYNLSNS-SIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPS 231
Query: 435 DIVWGRE 441
IV G +
Sbjct: 232 TIVRGVD 238
>gi|146302052|ref|YP_001196643.1| hypothetical protein Fjoh_4316 [Flavobacterium johnsoniae UW101]
gi|146156470|gb|ABQ07324.1| Mammalian cell entry related domain protein [Flavobacterium
johnsoniae UW101]
Length = 279
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
ME ++ YT +G+FV L +IY++ + G + + V GL ++VR
Sbjct: 1 MEKQSGYTWKLGMFVTVGLLLFIIAIYFIGKQKNLFGSTFHITSKFKT-VSGLEVGNNVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
F+GI +G + + L + + A+I + GL G + ++ K
Sbjct: 60 FSGINIGTVEEIRLINDSSVVVSMVIKDEVRKFIKTDARASIGSDGLMGDKVLTITPGEK 119
Query: 120 EKKTIFQIATERN 132
K I +
Sbjct: 120 STKVIEDNGAIAS 132
>gi|226939989|ref|YP_002795062.1| ABC transport system substrate-binding protein [Laribacter
hongkongensis HLHK9]
gi|226714915|gb|ACO74053.1| probable ABC transport system substrate-binding protein [Laribacter
hongkongensis HLHK9]
Length = 160
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+F + F ++ ++ ++ GL + V+
Sbjct: 1 MKRATIDLWVGIFALIGFGAILFLALKVANLTTTSTGTTYTVVADFDNIGGLKVRAPVKA 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + + + A+I T GL G Y+ L
Sbjct: 61 AGVIVGRVTDIRLD-THTMRARVALALDSQYQFARDVAASINTSGLLGEQYVALLDGGDT 119
Query: 121 KK 122
+
Sbjct: 120 EM 121
>gi|56708311|ref|YP_170207.1| cell entry (mce) related family protein [Francisella tularensis
subsp. tularensis SCHU S4]
gi|110670782|ref|YP_667339.1| cell entry (mce) related family protein [Francisella tularensis
subsp. tularensis FSC198]
gi|224457431|ref|ZP_03665904.1| cell entry (mce) related family protein [Francisella tularensis
subsp. tularensis MA00-2987]
gi|254370794|ref|ZP_04986799.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254875131|ref|ZP_05247841.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|56604803|emb|CAG45882.1| mycobacterial cell entry (mce) related family protein [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110321115|emb|CAL09265.1| mycobacterial cell entry (mce) related family protein [Francisella
tularensis subsp. tularensis FSC198]
gi|151569037|gb|EDN34691.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis FSC033]
gi|254841130|gb|EET19566.1| conserved hypothetical protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159542|gb|ADA78933.1| mycobacterial cell entry (mce) related family protein [Francisella
tularensis subsp. tularensis NE061598]
Length = 241
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 81/241 (33%), Gaps = 3/241 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+ GLFV+ ++F F ++LS D + S+ GL+ S V +
Sbjct: 3 ENSIKNLIAGLFVIFMVFVMIFIGFFLSG-GFKDQHTTTFVTNFK-SISGLNVGSDVSYK 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKE 120
G +G++ + +++ P I P+Y T AT+++ G+ G + +
Sbjct: 61 GFSIGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I ++ Q IT+ PS + ++ + + + S K++
Sbjct: 121 NTSLDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPENLDRFNQF 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I +N S + + + +
Sbjct: 181 TDSINILLYNLSNSSIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPSTIVRGVDHK 240
Query: 241 Q 241
+
Sbjct: 241 E 241
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 31/247 (12%), Positives = 84/247 (34%), Gaps = 12/247 (4%)
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ I ++ V ++ + + ++ + VS F
Sbjct: 4 NSIKNLIAGLFVIFMVFVMIFIGFFLSGGFKDQHTTTFVTNFKSISGLNVGSDVSYKGFS 63
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
I+ + + + ++ +I ++ T ++ +S
Sbjct: 64 IGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAKNTS 123
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ I Q +I S + +E+I + ++ + E+ K N + + +
Sbjct: 124 LDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPEN---------- 173
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ F ++ IN + ++ N+ + L ++ + + QET+ ++ + E +P
Sbjct: 174 -LDRFNQFTDSINILLYNLSNS-SIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPS 231
Query: 435 DIVWGRE 441
IV G +
Sbjct: 232 TIVRGVD 238
>gi|118497853|ref|YP_898903.1| hypothetical protein FTN_1268 [Francisella tularensis subsp.
novicida U112]
gi|134301735|ref|YP_001121703.1| hypothetical protein FTW_0695 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|194323826|ref|ZP_03057602.1| mycobacterial cell entry [Francisella tularensis subsp. novicida
FTE]
gi|208779917|ref|ZP_03247261.1| mycobacterial cell entry [Francisella novicida FTG]
gi|254373208|ref|ZP_04988697.1| conserved hypothetical protein [Francisella tularensis subsp.
novicida GA99-3549]
gi|118423759|gb|ABK90149.1| conserved protein of unknown function [Francisella novicida U112]
gi|134049512|gb|ABO46583.1| mammalian cell entry (mce) related protein [Francisella tularensis
subsp. tularensis WY96-3418]
gi|151570935|gb|EDN36589.1| conserved hypothetical protein [Francisella novicida GA99-3549]
gi|194322190|gb|EDX19672.1| mycobacterial cell entry [Francisella tularensis subsp. novicida
FTE]
gi|208744372|gb|EDZ90672.1| mycobacterial cell entry [Francisella novicida FTG]
Length = 241
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/241 (15%), Positives = 81/241 (33%), Gaps = 3/241 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+ GLFV+ ++F F ++LS D + S+ GL+ S V +
Sbjct: 3 ENSIKNLIAGLFVIFMVFVMIFIGFFLSG-GFKDQHTTTFVTNFK-SISGLNVGSDVSYK 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKE 120
G +G++ + +++ P I P+Y T AT+++ G+ G + +
Sbjct: 61 GFSIGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I ++ Q IT+ PS + ++ + + + S K++
Sbjct: 121 NTSLDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPENLDRFNQF 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I +N S + + + +
Sbjct: 181 TDSVNILLYNLSNSSIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPSTIVRGVDHK 240
Query: 241 Q 241
+
Sbjct: 241 E 241
Score = 44.5 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 30/247 (12%), Positives = 84/247 (34%), Gaps = 12/247 (4%)
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ I ++ V ++ + + ++ + VS F
Sbjct: 4 NSIKNLIAGLFVIFMVFVMIFIGFFLSGGFKDQHTTTFVTNFKSISGLNVGSDVSYKGFS 63
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
I+ + + + ++ +I ++ T ++ +S
Sbjct: 64 IGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAKNTS 123
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ I Q +I S + +E+I + ++ + E+ K N + + +
Sbjct: 124 LDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPEN---------- 173
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ F ++ +N + ++ N+ + L ++ + + QET+ ++ + E +P
Sbjct: 174 -LDRFNQFTDSVNILLYNLSNS-SIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPS 231
Query: 435 DIVWGRE 441
IV G +
Sbjct: 232 TIVRGVD 238
>gi|85704440|ref|ZP_01035542.1| paraquat-inducible protein, putative [Roseovarius sp. 217]
gi|85670848|gb|EAQ25707.1| paraquat-inducible protein, putative [Roseovarius sp. 217]
Length = 697
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 48/418 (11%), Positives = 115/418 (27%), Gaps = 37/418 (8%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LD----QEYPNHSLAKALIRPDTPLY 94
+ ++ GLS D+ V FNG+ +G++ L +D + L IRP
Sbjct: 299 LSAVFEENIAGLSVDAPVEFNGLRIGQVSALNGFVDNERFGDGRVRLLVTLAIRPGRLGL 358
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN---A 151
+ R ++ + + A P I F +
Sbjct: 359 EGGAGRDAALAFLRESVASGLRARLASASLLTGGLKVELVEIANARPDEIEEFGEDGLFI 418
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
T I+D S + E I + + AN + +
Sbjct: 419 PTTESDIADVSATATGVFERINALPVEEVMSEAIALMQNANALISSSDIRAVPGNVNALL 478
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
D ++ ++ + + + + + V +
Sbjct: 479 DETRGVVGAPEVQGLPGRLDAVLTEMETLVAQIAQEALAAKLSAALSDASAASQGVSDAV 538
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
++ ++D + + + I + + + +
Sbjct: 539 SGVPDLVARMDAVARKAETVEIDAMAAELTALIRSAEALLAGDGA--------------- 583
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ + LN + ++ +++++ ++ + A+ A TF + + I
Sbjct: 584 ----QALPETLNATLEELRNVLAQLREGGVVENATAALGSARDAADTFAEAGRDLPGLIA 639
Query: 392 SIGNNLQNFSQSGL---------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
L + D + +R+++ ERNP ++ GR
Sbjct: 640 EAEAVLAQARGTLAGYAAENGVGRDARAALREVERAARAVSSLARTIERNPNSLLLGR 697
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 26/398 (6%), Positives = 85/398 (21%), Gaps = 13/398 (3%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS-SVRFNGIPVGRIVGLFLDQE 76
L + L + Q +I + G+ + +R+ + VG + +
Sbjct: 29 LVPLAALVIVLGVAWQTYADRGPLIEIGFDNASGVRPGTTELRYRDVSVGLVEDVSFAP- 87
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
L K + + Y A + + +
Sbjct: 88 GLGRVLVKVRVDQEVAPYIDNDAQFWVVRPQVSARGVTGLGTVLSGVYIEGLWDETPGEV 147
Query: 137 ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISH 196
+ + + ++ ++ ++E T+ A+ S
Sbjct: 148 SERFDGLSDAPLERVGQSGLRLMLRAQGKASLVEGAPIVYRGIEVGRVGRPTITADGSSA 207
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS 256
+ + +++ + T + + +
Sbjct: 208 QAEALVFAPH-----------DSLINSATRFWDTSGFSFSLGPSGAQLDFSSVAALVSGG 256
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
+ V + ++ S+ S + +
Sbjct: 257 VTFETMISGGTPAQSGDVYTVFPEESAARANLFVGDDSEVLSLSAVFEENIAGLSVDAPV 316
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
+ + ++ E A ++ + +L +
Sbjct: 317 EFNGLRIGQVSALNGFVDNERFGDGRVRLLVTLAIRPGRLGLEGGAGRDAALAFLRESVA 376
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
R + + L + + ++I+
Sbjct: 377 SGLRARLASASLLTGGLKVELVEIANARPDEIEEFGED 414
Score = 43.8 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 36/385 (9%), Positives = 98/385 (25%), Gaps = 13/385 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L + + + GI VGR+ + + + + + ++ + I + T
Sbjct: 179 LVEGAPIVYRGIEVGRVGRPTITADGSSA-------QAEALVFAPHDSLINSATRFWDTS 231
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+L + + +T + + + + S +
Sbjct: 232 GFSFSLGPSGAQLDFSSVAALVSGGVTFETMISGGTPAQSGDVYTVFPEESAARANLFVG 291
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + A E L+ + + QV+ + N + + I
Sbjct: 292 DDSEVLSLSAVFEENIAGLSVDAPVEFNGLRIGQVSALNGFVDNERFGDGRVRLLVTLAI 351
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS- 290
+ L + ++ +S T E+ + + +
Sbjct: 352 RPGRLGLEGGAGRDAALAFLRESVASGLRARLASASLLTGGLKVELVEIANARPDEIEEF 411
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT----SNLNDSS 346
+IAD ++ I + + + S++
Sbjct: 412 GEDGLFIPTTESDIADVSATATGVFERINALPVEEVMSEAIALMQNANALISSSDIRAVP 471
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
L+ + + E L + +I + + + S +
Sbjct: 472 GNVNALLDETRGVVGAPEVQGLPGRLDAVLTEMETLVAQIAQEALAAKLSAALSDASAAS 531
Query: 407 D-IQNLVRKLQETVNHFDDCLNNFE 430
+ + V + + V D E
Sbjct: 532 QGVSDAVSGVPDLVARMDAVARKAE 556
>gi|89256084|ref|YP_513446.1| cell entry (mce) related family protein [Francisella tularensis
subsp. holarctica LVS]
gi|115314560|ref|YP_763283.1| ABC transporter ATP-binding protein [Francisella tularensis subsp.
holarctica OSU18]
gi|167010769|ref|ZP_02275700.1| probable ABC superfamily ATP binding cassette transporter,
ABC/membrane protein [Francisella tularensis subsp.
holarctica FSC200]
gi|169656564|ref|YP_001428166.2| hypothetical protein FTA_0734 [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254367413|ref|ZP_04983439.1| cell entry (MCE) related family protein [Francisella tularensis
subsp. holarctica 257]
gi|254369092|ref|ZP_04985104.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|290954530|ref|ZP_06559151.1| hypothetical protein FtulhU_10156 [Francisella tularensis subsp.
holarctica URFT1]
gi|295312046|ref|ZP_06802861.1| hypothetical protein FtulhU_10143 [Francisella tularensis subsp.
holarctica URFT1]
gi|89143915|emb|CAJ79134.1| cell entry (mce) related family protein [Francisella tularensis
subsp. holarctica LVS]
gi|115129459|gb|ABI82646.1| probable ABC superfamily ATP binding cassette transporter,
ABC/membrane protein [Francisella tularensis subsp.
holarctica OSU18]
gi|134253229|gb|EBA52323.1| cell entry (MCE) related family protein [Francisella tularensis
subsp. holarctica 257]
gi|157122042|gb|EDO66182.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|164551632|gb|ABU61210.2| mammalian cell entry (mce) related protein [Francisella tularensis
subsp. holarctica FTNF002-00]
Length = 241
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/241 (15%), Positives = 82/241 (34%), Gaps = 3/241 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+ GLFV+ ++F F ++LS D + S+ GL+ S V +
Sbjct: 3 ENSIKNLIAGLFVIFMVFVMIFIGFFLSG-GFKDQHTTTFVTNFK-SISGLNVGSDVSYK 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKE 120
G +G++ + +++ P I P+Y T AT+++ G+ G + +
Sbjct: 61 GFSIGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I ++ Q IT+ PS + ++ + + + S K++
Sbjct: 121 NTSLDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPENLDRFNQF 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I +N S + +N + +
Sbjct: 181 TDSVNILLYNLSNSSIYFNKTLMNLNETMTESQENITRLNNVIRILEYDPSTIVRGVDHK 240
Query: 241 Q 241
+
Sbjct: 241 E 241
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 83/247 (33%), Gaps = 12/247 (4%)
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ I ++ V ++ + + ++ + VS F
Sbjct: 4 NSIKNLIAGLFVIFMVFVMIFIGFFLSGGFKDQHTTTFVTNFKSISGLNVGSDVSYKGFS 63
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
I+ + + + ++ +I ++ T ++ +S
Sbjct: 64 IGKVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAKNTS 123
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ I Q +I S + +E+I + ++ + E+ K N + + +
Sbjct: 124 LDLIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPEN---------- 173
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ F ++ +N + ++ N+ + L ++ + + QE + ++ + E +P
Sbjct: 174 -LDRFNQFTDSVNILLYNLSNS-SIYFNKTLMNLNETMTESQENITRLNNVIRILEYDPS 231
Query: 435 DIVWGRE 441
IV G +
Sbjct: 232 TIVRGVD 238
>gi|240170396|ref|ZP_04749055.1| MCE-family protein [Mycobacterium kansasii ATCC 12478]
Length = 340
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/287 (13%), Positives = 83/287 (28%), Gaps = 11/287 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F V + + F + + + +V L +VR GI VG
Sbjct: 3 IKFGIFAVIMTVLTVFLFFIFGQYRTGSTNGYSAV---FNNVSRLKAGQTVRVAGIRVGT 59
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L + K L T A +R L G Y+EL K +
Sbjct: 60 VNSVTLLPD--KRVRVKFDADRSVVLTTGTRAVVRYLNLVGDRYLELVDGPGSTKVLPAG 117
Query: 128 ATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
R + + ++ + + + Q ++ L+ T +
Sbjct: 118 GEIPLDRTAPALDLDLLLGGLKPVIQGLNPQDVNALTASLVQVFQGEGGTLQSLLSKTSS 177
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T++ ID + D +T + S + ++
Sbjct: 178 FSNTLADNNETVQQLIDNLNTVVATLDKDGDKFSTALDRLQRLVSAFSDDRNTIGTAIDA 237
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + ++ ++ + TV + + KID L+
Sbjct: 238 LDQGTASIADLLTRARPPLAGTVDQLNRLAPLLDQDKDKIDVSLAKL 284
>gi|311695325|gb|ADP98198.1| mammalian cell entry related domain protein [marine bacterium HP15]
Length = 149
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 47/121 (38%), Gaps = 2/121 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLF+++ F +S + I GL+ V
Sbjct: 1 MAQRTTEIVVGLFMIAGCAALLFLALQVSGLSPKSAESTYTIYANFNDTGGLTPRGRVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG I + L+ E + + I D + ++A IRT GL G YI++S +
Sbjct: 61 AGVTVGTIESISLNTETF-QARVEMSIHSDVDNIPSDSSAVIRTSGLLGEQYIDISIGAE 119
Query: 120 E 120
Sbjct: 120 M 120
>gi|167912807|ref|ZP_02499898.1| mce family protein [Burkholderia pseudomallei 112]
Length = 170
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|167817680|ref|ZP_02449360.1| mce family protein [Burkholderia pseudomallei 91]
Length = 165
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|167740467|ref|ZP_02413241.1| mce family protein [Burkholderia pseudomallei 14]
gi|167904545|ref|ZP_02491750.1| mce family protein [Burkholderia pseudomallei NCTC 13177]
Length = 171
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|167721497|ref|ZP_02404733.1| mce family protein [Burkholderia pseudomallei DM98]
gi|167847584|ref|ZP_02473092.1| mce family protein [Burkholderia pseudomallei B7210]
Length = 168
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|325294997|ref|YP_004281511.1| Mammalian cell entry related domain protein [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325065445|gb|ADY73452.1| Mammalian cell entry related domain protein [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 528
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/379 (12%), Positives = 116/379 (30%), Gaps = 22/379 (5%)
Query: 1 MESK-NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG-PMAEVIIRIPGSVDGLSTDSSV 58
M K + VG FVV L G I+ +V GL D+ V
Sbjct: 1 MAKKLSLEAKVGAFVVLSFLGLGVIATTLEPLKFKRGISEKHYYIKFK-NVAGLEKDAPV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG+++G+ + + ++ + + LY +A I T GL G Y+EL+
Sbjct: 60 RVAGVTVGKVIGIKVKENS---AIVEIIFLKPVKLYKDASARIETMGLMGEKYVELNPGS 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ A + + + ++ +
Sbjct: 117 PLNPELPSGAVIE------------KTQDSPSIDELISALYETIEKFNNALITPNGENRL 164
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + + + + + + ++ + I
Sbjct: 165 AVIMDKISQLTSHIDKAVNNLNGMMEENRKTIKEVLENALVLSSTLKEELPQIMDNVNSL 224
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
Q+ E + + ++ + + + ++ +I LL++ + + + T
Sbjct: 225 TTQLSEIAVENRQDIRETIVSLREVSERAPKIAEKIDKLTSQIQKLLNEENLQNIQEITK 284
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
N+ ++ + ++ + E K+ + +N++ + + +
Sbjct: 285 ----NLKSTSKEFKELLTKVNEGKGTIGKLFNDETLYKNLSKTTETLGKVADKFQTTKTF 340
Query: 359 ISALKENNSLFKDAQRAMH 377
I + N+ D + +
Sbjct: 341 IGFRGDVNTRTGDTRGILS 359
>gi|53724273|ref|YP_104244.1| ABC transporter periplasmic substrate-binding protein [Burkholderia
mallei ATCC 23344]
gi|52427696|gb|AAU48289.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei ATCC 23344]
Length = 184
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 1 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 61 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 119
Query: 121 KK 122
+
Sbjct: 120 EM 121
>gi|288942537|ref|YP_003444777.1| Mammalian cell entry related domain-containing protein
[Allochromatium vinosum DSM 180]
gi|288897909|gb|ADC63745.1| Mammalian cell entry related domain protein [Allochromatium vinosum
DSM 180]
Length = 155
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 3/119 (2%)
Query: 1 MESKNY-YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + +VG FV L FF +S + ++ +V L + V
Sbjct: 1 MAKRRNVELTVGTFVALGLVALFFLAMQVSNLSLNTAGEGYLVQARFANVGSLKVRAPVT 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + D++ I + T A+I T GL G YI L
Sbjct: 61 MAGVRIGRVESVRFDKQTYEAV-VSMRIDAAVDSIPDDTFASIFTAGLLGEQYIGLEPG 118
>gi|118463448|ref|YP_879938.1| virulence factor Mce [Mycobacterium avium 104]
gi|118164735|gb|ABK65632.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 350
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 33/286 (11%), Positives = 88/286 (30%), Gaps = 6/286 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ V +F ++L S + V L VR G+
Sbjct: 10 RSMVIKVSIFAAAMLLVSAGLVVVFGDFRFGPESTYHATFV---DVSRLKAGQKVRIAGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + + L+++ + LY ST A IR + L G Y+E+++ E +
Sbjct: 67 PVGAVEAVKLNRDNT--IDVTFGVDKRYTLYSSTRAVIRYENLVGDRYLEITSGPGELRK 124
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ T +Q + + + +I+ ++ +
Sbjct: 125 LPAGGTINSQHTQPALDLDALLGGLRPVLKGL-DADKVNTISSAVIQLLQGQGGALSNVL 183
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S + + + + + + + + + I
Sbjct: 184 ADTSAFTSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSASVDQLQQLITGLAKHKDDIA 243
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I ++ ++ + N+ ++ + + + ++D+ ++ +
Sbjct: 244 GAIPPLASTTTDLTELLQNSRRPLQGVLENTRPLATELDNRKAEVN 289
>gi|149378022|ref|ZP_01895746.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Marinobacter algicola
DG893]
gi|149357677|gb|EDM46175.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Marinobacter algicola
DG893]
Length = 151
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 2/121 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLF+++ + F +S + + GL+ + V
Sbjct: 1 MAQRTTEVIVGLFMIAGIAAIMFLALQVSGLTPKAPESSYTLYANFNDAGGLTPRAKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG+I + L++E + + + ++A IRT GL G YI++S
Sbjct: 61 AGVTVGKIREITLNRETY-QARVTIDVNASVDNIPADSSAVIRTSGLLGEQYIDISVGGD 119
Query: 120 E 120
Sbjct: 120 M 120
>gi|222055033|ref|YP_002537395.1| Mammalian cell entry related domain protein [Geobacter sp. FRC-32]
gi|221564322|gb|ACM20294.1| Mammalian cell entry related domain protein [Geobacter sp. FRC-32]
Length = 360
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/349 (13%), Positives = 110/349 (31%), Gaps = 12/349 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
G+F++ L F I + ++ P ++ + I V GL + V G+ V
Sbjct: 10 SQLKAGIFIIFALLFFAGGILLMGEKTKFFVPKGKLSV-IMSDVAGLKVGAPVWLAGVDV 68
Query: 66 GRIVGLFLD-QEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
G + + + N + + + T++T+GL G Y++++ +
Sbjct: 69 GIVTDIQFEKPNKTNEVEIVLQVEKSALKKIGKDSAITVKTRGLMGEKYVDVTPSLYITQ 128
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + + + ++ + A K + S + + ++ + T T
Sbjct: 129 VP--------ETRLYGTSITKLDDVMQKAGKAFDKFNHSLDKMNRGEGSLGRLATDTKLY 180
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+S + + + + + L + M +
Sbjct: 181 DNLVSLTAELDSFAKTANSGQGTLGKLNKSREPYDRLMAILNRTDATMKDIQSSEGTLSK 240
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
L + + + V +DQ DVRE Q LL D K +
Sbjct: 241 LLHDRELYDKMVALADQSKEAAEDVRELKQRLTSPDGTFGKLLQDREFYDKGMALLERAD 300
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
N + ++ I++ + + + + + ++N + E
Sbjct: 301 NSVKAFEDVAIRINSGEGTAGKLVSDQALYDKMNKMIDDMNLLVKDLKE 349
>gi|32266621|ref|NP_860653.1| hypothetical protein HH1122 [Helicobacter hepaticus ATCC 51449]
gi|32262672|gb|AAP77719.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
Length = 258
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 32/240 (13%), Positives = 76/240 (31%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME Y + IL I WL+R + V G+S ++ +R+
Sbjct: 1 MERNVKYVWIATLFFIILILMVAFILWLNRFEIDSTRYTQYYAYSSDEVSGVSANTPIRY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VGR+ + + LI + + I +QGLAG Y+ L
Sbjct: 61 KGISVGRVQSVSFKDIKEGTIQIQMLIDSQLYVRENAKVIISSQGLAGANYLSLIQSNGG 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ ++ + ++ +++ + + + + + + +
Sbjct: 121 ELLQKNSEGKKVLELDKGSIEKIMSKASELSDDMASLLKSLNNGLNEENLQEINIMIKEL 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+N ++ ++ + + ++ D+ ++ ID +
Sbjct: 181 SNSAHNLQNISAQMNKNMQRGEYNLREILTPTLFQLQGSLQDMSKFFNQASSFIDKMDKD 240
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 61/134 (45%), Gaps = 3/134 (2%)
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL---FKDAQRA 375
++ ++ ++ + +IE I S ++ S A L+ +NN + + K+ +
Sbjct: 124 QKNSEGKKVLELDKGSIEKIMSKASELSDDMASLLKSLNNGLNEENLQEINIMIKELSNS 183
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
H ++ S ++N+ + NL+ L +Q ++ + + N ++ +++P +
Sbjct: 184 AHNLQNISAQMNKNMQRGEYNLREILTPTLFQLQGSLQDMSKFFNQASSFIDKMDKDPYN 243
Query: 436 IVWGREKGSVKIYK 449
++G++ S + K
Sbjct: 244 SLFGKQNQSSQKDK 257
>gi|145222149|ref|YP_001132827.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145214635|gb|ABP44039.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 343
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 99/307 (32%), Gaps = 8/307 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ SV +F V +L + I L T VR
Sbjct: 3 RERRTLVSVSIFTVVMLMVAASLIVVFGEFRFAAEDKYRAT---FTDASRLKTGQDVRIA 59
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
GIPVG + GL L+ + + + LY ST A IR + L G Y+E+++ +
Sbjct: 60 GIPVGTVEGLSLNPDNS--VEVEFTVNERYQLYTSTKAVIRYENLVGDRYLEITSGPGDL 117
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ T N + K+++ S + ++++ L ++
Sbjct: 118 VKLPPGGTVVNTEPALDLDALLGGLKPVVKGLDGAKVNEISSAVIELLQGEGGALAAMLS 177
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + LA I ++ + D K D + + + +
Sbjct: 178 STSAFTQNLAARDQLIGDVITNLNTVLGTVDEKGAE---FDASVDQLQKLITGLAEGRDP 234
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
I I + ++ + + ++ + + Q++D +D + ++ +
Sbjct: 235 IAGAIGPLATAENDLTEMLETSRRPIQGVIENVRPFAQRMDERKADVNKVIEPLAENYLR 294
Query: 302 ENIADST 308
N +
Sbjct: 295 LNALGAY 301
>gi|317475575|ref|ZP_07934837.1| hypothetical protein HMPREF1016_01819 [Bacteroides eggerthii
1_2_48FAA]
gi|316908279|gb|EFV29971.1| hypothetical protein HMPREF1016_01819 [Bacteroides eggerthii
1_2_48FAA]
Length = 297
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 97/290 (33%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ ++ L + I +L N + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIAALCILVYGINYLKGINMFKPSSYFYVK--FQNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D P +A+ + D + +TA + + L G+ L
Sbjct: 59 DGFRVGIVRDLYYDYSQPGKVIAEIDVNTDLRIPKGSTAELAAEMLGGVKMNLLLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + + + + E K+ + ++ + P T
Sbjct: 119 EKYQIGDTIPGTLNNGMMEKVAAM---MPQLEKMLPKLDSILGSLNMVLADPAIP---TT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T S + + + + + + +L ++ A +Q ++
Sbjct: 173 LHNVQTLTANLAVTSGQLQTLMNKDIPQLTGKLNTIGDNFVLISNNLKEIDYATAMQSID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ ++ + + V ++D LL D S
Sbjct: 233 STLANVKMITDKLNRKDNTVGLLLNDPS-LYNNLNATTANAASLLEDLKS 281
>gi|150006673|ref|YP_001301417.1| hypothetical protein BVU_4194 [Bacteroides vulgatus ATCC 8482]
gi|254881429|ref|ZP_05254139.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|319642817|ref|ZP_07997455.1| hypothetical protein HMPREF9011_03055 [Bacteroides sp. 3_1_40A]
gi|149935097|gb|ABR41795.1| conserved hypothetical protein [Bacteroides vulgatus ATCC 8482]
gi|254834222|gb|EET14531.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA]
gi|317385561|gb|EFV66502.1| hypothetical protein HMPREF9011_03055 [Bacteroides sp. 3_1_40A]
Length = 295
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 86/284 (30%), Gaps = 8/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL ++ L F I +L N + + +++GL+ S V NG VG
Sbjct: 4 EVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEY--TNINGLAGSSPVFANGYKVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + P H + + + + +T + T+ L + L +
Sbjct: 62 TVRNINYNYAKPGHVTVEVEVDKEMRIPKGSTGELVTEMLGTVKMNLLLNFNSTEYYQPG 121
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
A + + + + + + + P + +
Sbjct: 122 DTLPGKTNAGLMG-----AAEEKLVPQIEQMLPKMDSILYSLNKILADPALSATLHNAEK 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T + + M+ + + + + +L + A K++ L N+
Sbjct: 177 LTANLDVTTRQLNMLMQKDLPQLTGKLNTIADNFIAISDNLKGIDYASTFNKIDSTLYNV 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
Q+ + + + + +D Q LL D +
Sbjct: 237 QMLTEKLNRKDNSIGLLFNDP-TFYQNLSATTANAATLLEDLKA 279
>gi|167920766|ref|ZP_02507857.1| mce family protein [Burkholderia pseudomallei BCC215]
Length = 172
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|304310284|ref|YP_003809882.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [gamma proteobacterium HdN1]
gi|301796017|emb|CBL44221.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [gamma proteobacterium HdN1]
Length = 156
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +N VG F+V+ F +S + ++ GL+ + V
Sbjct: 1 MRMRNLEIMVGAFMVAGFAALVFLALRVSGLAMDSREATYRLSGHFENIGGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ ++ D + ++ + I + TA+I T GL G YI +
Sbjct: 61 AGVAIGRVSRIYFD-DKNFTAVVEMDINKSVSNISTDATASILTSGLLGEKYIGIVEG 117
>gi|83815739|ref|YP_444488.1| paraquant-inducible protein B [Salinibacter ruber DSM 13855]
gi|83757133|gb|ABC45246.1| paraquant-inducible protein B [Salinibacter ruber DSM 13855]
Length = 344
Score = 90.8 bits (222), Expect = 4e-16, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T +GLFVV L + S Q+ I SV+GL + V+F
Sbjct: 1 MSQRVSPTLIGLFVVGALALGVVGVGAFG-SGQFFEQRTTFISYFDESVNGLDVGAPVKF 59
Query: 61 NGIPVGRIVGLFLD---QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+P+G + + L + + I D P+ +T A + +
Sbjct: 60 KGVPIGEVTDINLRVDLENETFQVPVQYAINLD-PVTDTTGARLNLDDPTLLR 111
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/250 (9%), Positives = 79/250 (31%), Gaps = 7/250 (2%)
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ T + + + + D I + ++ ++ + S+ Q
Sbjct: 91 LDPVTDTTGARLNLDDPTLLRDQIEDGLRAQLQLESIVTGKLYVELTYISDPDSAVYAQG 150
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
+ + ++G+ L+++ ++ + + ++ + + +
Sbjct: 151 PPSRLSIPTELSPLAKLGEGASGLVTNLRQFDVTQINENLVTFLVNANDKLEALDAEAIN 210
Query: 321 I----TDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQR 374
T + + + + ++ ++++ + + + + ++
Sbjct: 211 RSALSTIESVRKVVESKEVRTALQDMPKATERLRATIKDAQALIQRLDRGVEPTADELEK 270
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
R T +++ R + + L S G + + L E + + ERNP
Sbjct: 271 TSRQLRATLKRMRRTMDEVDQTLSPNSGIGY-QMNEALSNLSEATEALRVLVQSLERNPS 329
Query: 435 DIVWGREKGS 444
+ GRE+
Sbjct: 330 MFLRGREEPP 339
>gi|152980478|ref|YP_001352744.1| paraquat-inducible protein B [Janthinobacterium sp. Marseille]
gi|151280555|gb|ABR88965.1| paraquat-inducible protein B [Janthinobacterium sp. Marseille]
Length = 543
Score = 90.8 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/394 (10%), Positives = 102/394 (25%), Gaps = 27/394 (6%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S V F + VG++ LD + + + P A R
Sbjct: 172 NDIGSLDVGSPVYFRRVKVGQVAAYELDGDGKG---VTLRVFVNAPYEKFVEANTRFWHA 228
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+G+ ++ + A T + + ENT+ +++
Sbjct: 229 SGLDMQVNASGLTLRTQ-SLATILLGGIAFGTPDLGTPSASPAALENTAFALAEDEAAAM 287
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
K + + + + A + + + F +
Sbjct: 288 KQKDGSSETILLFFNQSLRGLSPGAPVDFRGVVIGEVKSIGVEFDRDEREFRMPVLVQIY 347
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
D++ + + Q K + + + + K+ L
Sbjct: 348 PDRLRRQSTDESKESRYTQKQRLQFLINKGLRAQLRPGNLLTGQVYVALDFFPKLPPLKV 407
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
D + + T + + + + I +L +
Sbjct: 408 DLNKQPFELPTVPNSLDELQA--------------QIKDIATKLNKVPFDEIGKDLRTAL 453
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + ++ N + + AM R T + +
Sbjct: 454 ATLNKTLISAEELTRTLN-NDVSPEITAAMKDARKTINSAEQTLSQ--------DSPLQQ 504
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ +R++ + ER+P+ ++ G+
Sbjct: 505 DMREAMREITRAAGSVRVLTDYLERHPESLLRGK 538
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/82 (18%), Positives = 30/82 (36%), Gaps = 3/82 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN---HSLAKALIRPDT 91
DG +++ S+ GLS + V F G+ +G + + ++ + I PD
Sbjct: 291 DGSSETILLFFNQSLRGLSPGAPVDFRGVVIGEVKSIGVEFDRDEREFRMPVLVQIYPDR 350
Query: 92 PLYPSTTATIRTQGLAGITYIE 113
ST + ++
Sbjct: 351 LRRQSTDESKESRYTQKQRLQF 372
Score = 41.5 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 34/450 (7%), Positives = 107/450 (23%), Gaps = 38/450 (8%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE 76
+ + I ++ GP I+ + +GL ++V++ + +G + GL L ++
Sbjct: 31 IIAALVGITLVAHILMQRGPE---IVLTFKTAEGLEAGKTAVKYKDVQIGIVEGLRLSRD 87
Query: 77 YPNHSLAKALIRPD-------------TPLYPSTTATIRTQGLAGITYIELSTLRK---- 119
+H + D T+ L YI +
Sbjct: 88 R-SHVRVSVQLNKDAEAFTAKDTRYWVVRPRLDTSGISGLGTLLSGAYIGVDAGTSEETV 146
Query: 120 -EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
E + + + + + + + + T
Sbjct: 147 EEFAGLEVPPIVTRDASGRQFLLRANDIGSLDVGSPVYFRRVKVGQVAAYELDGDGKGVT 206
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + + ++S ++ ++
Sbjct: 207 LRVFVNAPYEKFVEANTRFWHA-SGLDMQVNASGLTLRTQSLATILLGGIAFGTPDLGTP 265
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-------------HLL 285
+ + + F + + + +
Sbjct: 266 SASPAALENTAFALAEDEAAAMKQKDGSSETILLFFNQSLRGLSPGAPVDFRGVVIGEVK 325
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
S + + + +R + + + QK + + + L
Sbjct: 326 SIGVEFDRDEREFRMPVLVQIYPDRLRRQSTDESKESRYTQKQRLQFLINKGLRAQLRPG 385
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF-SQSG 404
+ ++ ++ L + T ++ +++ I I L
Sbjct: 386 NLLTGQVYVALDFFPKLPPLKVDLNKQPFELPTVPNSLDELQAQIKDIATKLNKVPFDEI 445
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
D++ + L +T+ ++ +
Sbjct: 446 GKDLRTALATLNKTLISAEELTRTLNNDVS 475
>gi|254373780|ref|ZP_04989263.1| conserved hypothetical protein [Francisella novicida GA99-3548]
gi|151571501|gb|EDN37155.1| conserved hypothetical protein [Francisella novicida GA99-3548]
Length = 177
Score = 90.8 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K + TSVG+F++ + F + +S ++ ++ + +V L T++SV
Sbjct: 1 MRNKYFETSVGIFIIIGVLCLLFLTFKVSGTSFKAFNTQEYTITADFK-NVGSLRTNASV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ +GR+ + L++ Y ++ I D + + +A+I G+ G Y+ LS
Sbjct: 60 KIAGVEIGRVTKIALEKSYNGFMAVVTMAINSDKKIPANYSASIAMSGILGDNYVALSPP 119
Query: 118 RKEKKTIFQIA 128
++ I IA
Sbjct: 120 SEDIMAIAGIA 130
>gi|304396327|ref|ZP_07378208.1| Mammalian cell entry related domain protein [Pantoea sp. aB]
gi|304355836|gb|EFM20202.1| Mammalian cell entry related domain protein [Pantoea sp. aB]
Length = 181
Score = 90.8 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG+F++ L + F ++ + ++ GL S V+
Sbjct: 1 MQSKKSEIWVGIFMIMALIAALFLCLRVADLKSMGTEPTWKLYATFDNIGGLKASSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + L+ + + + + +++ +RTQGL G ++ L+
Sbjct: 61 GGVVIGRVTEIALEPKTLLPRVTMEISDQYANKISDTSSLAVRTQGLLGEQFLALNLGFD 120
>gi|264676839|ref|YP_003276745.1| Mammalian cell entry related protein [Comamonas testosteroni CNB-2]
gi|299529659|ref|ZP_07043096.1| Mammalian cell entry related protein [Comamonas testosteroni S44]
gi|262207351|gb|ACY31449.1| Mammalian cell entry related protein [Comamonas testosteroni CNB-2]
gi|298722522|gb|EFI63442.1| Mammalian cell entry related protein [Comamonas testosteroni S44]
Length = 166
Score = 90.8 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K VGLFV+ F + + I ++ GL ++V+
Sbjct: 1 MQQKKSDVWVGLFVLIGALALVFLALQSANLLSLNFQKTYAITARFDNIGGLKPKAAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGRI + + + + + ++ I T GL G YI +
Sbjct: 61 AGVVVGRIESIAFN-DQTFQADVAMSMETRYAFPKDSSLKILTSGLLGDQYIGIEAG 116
>gi|323699474|ref|ZP_08111386.1| Mammalian cell entry related domain protein [Desulfovibrio sp.
ND132]
gi|323459406|gb|EGB15271.1| Mammalian cell entry related domain protein [Desulfovibrio
desulfuricans ND132]
Length = 148
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T+VG+FV+ L + L + + + GL ++ V+ G+ +G
Sbjct: 7 ETAVGIFVILGLLAVVYMSVKLGNVQLFSDKYYAIKANFTD-ISGLKVNAPVQMYGVEIG 65
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + LDQE + ++ + L A I+T GL G Y+++
Sbjct: 66 FVGEIGLDQE-KGVAAVTMMLLKEVQLTDDAIAAIKTNGLIGDKYVKIVPG 115
>gi|254774787|ref|ZP_05216303.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 331
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/288 (13%), Positives = 81/288 (28%), Gaps = 11/288 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F L F+F I + D + + ++ GL + + VR G+ VG++ L
Sbjct: 3 IFTAVCLLFTFTLIAVFGQLRFEDRTGYQAV---FTNISGLKSGNFVRIAGVEVGKVGDL 59
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L ++ + L T A +R + L G Y+ L + + AT
Sbjct: 60 SLHRD--GTVTVGFAVDKGVRLSEGTKAVVRYENLIGDRYLALEEGPGSPRRLPPGATIP 117
Query: 132 NQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
R + + + R Q + L+ T T
Sbjct: 118 LARTSPALDLDALIGGFRPLFRALDPDQVNALSGQLLRIFQGQGGTLASVLSQTSMLTST 177
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
++ I + + + + + + I
Sbjct: 178 LAGRSQLIGELITNLNTVLRTFATRDHEFSDGLDKLAQLVDGLAQRRDDISTGLAYINAA 237
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
++ +S + + V + +D+LL + +
Sbjct: 238 AGSITDLLSQSRQPLKDVVQHTDRMSGQVLSDRDYVDNLLKELPDIYQ 285
>gi|218128623|ref|ZP_03457427.1| hypothetical protein BACEGG_00193 [Bacteroides eggerthii DSM 20697]
gi|217989225|gb|EEC55539.1| hypothetical protein BACEGG_00193 [Bacteroides eggerthii DSM 20697]
Length = 297
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 97/290 (33%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ ++ L + I +L N + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIAALCILVYGINYLKGINMFKPSSYFYVK--FQNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D P +A+ + D + +TA + + L G+ L
Sbjct: 59 DGFRVGIVRDLYYDYSQPGKVIAEIDVNTDLRIPKGSTAELAAEMLGGVKMNLLLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + + + + E K+ + ++ + P T
Sbjct: 119 EKYQIGDTIPGTLNNGMMEKVAAM---MPQLEKMLPKLDSILGSLNTVLADPAIP---TT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T S + + + + + + +L ++ A +Q ++
Sbjct: 173 LHNVQTLTANLAVTSGQLQTLMNKDIPQLTGKLNTIGDNFVLISNNLKEIDYATAMQSID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ ++ + + V ++D LL D S
Sbjct: 233 STLANVKMITDKLNRKDNTVGLLLNDPS-LYNNLNATTANAASLLEDLKS 281
>gi|99078304|ref|YP_611562.1| hypothetical protein TM1040_3328 [Ruegeria sp. TM1040]
gi|99035442|gb|ABF62300.1| Mammalian cell entry related [Ruegeria sp. TM1040]
Length = 694
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/410 (9%), Positives = 105/410 (25%), Gaps = 22/410 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTA 99
+ + SV GLS+ + V GI VG + L Q + + K + + A
Sbjct: 297 ISVAFDDSVAGLSSGAPVELGGIKVGEVGSLTAAIQNETDTADVKLVAKLLLQPGLLGLA 356
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + + ++
Sbjct: 357 PGANEEDVLDFLETAVEGGMRARLASAGLLSSELMVELVRLDDVPPARFDRTAEPFPEMP 416
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + E + A N + + + T + +
Sbjct: 417 SAPSDLPDFSATAEGAMERISQLPVEELMAQAINTLASIEALAAAESTRQAPAAAVALLE 476
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
T + + + + ++ + + D +
Sbjct: 477 ETRALLNDPSTRALPGELRATVSDLRAILQELQQGRAVANLTAALQDGARAADEIATASE 536
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L+ D A + + + + +
Sbjct: 537 NLPALVDDLRDL------------AAKANNLEAEELIQSVNTLMTSADALIGTEAARALP 584
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE-------KINRYIPS 392
S+L+ + ++ ++ + + N+ A+ A + +E ++ R +
Sbjct: 585 SSLSAALEEIRTTLATLREGGLVDNANATMVSARDATQSVAQAAEGLPALSARLERLMTR 644
Query: 393 IGNNLQNFSQSGLNDIQNL--VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + + +++ L +R+++ ER+P +V+GR
Sbjct: 645 SESLVAAYGDRSNFNMETLDMLREIKSAARAVSQLARKIERDPNSLVFGR 694
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/381 (7%), Positives = 96/381 (25%), Gaps = 10/381 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
++ + V F GI VGR+ L + + T+ +
Sbjct: 177 ITEGAPVLFRGIEVGRLEHPRLTVSGNSIV-----VDAFIEAPHDRRINSATRFWDTSGF 231
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ +A+ + + G + A ++R
Sbjct: 232 TVSFGAEGLSLDVDSLASLVSGGIEFDSVFDGGSPANPGAVFDIYPDEATARRTAFARSM 291
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + + ++ + + L +
Sbjct: 292 AGGVAISVAFDDSVAGLSSGAPVELGGIKVGEVGSLTAAIQNETDTADVKLVAKLLLQPG 351
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
N+ + + ++ + E + +
Sbjct: 352 LLGLAPGANEEDVLDFLETAVEGGMRARLASAGLLSSELMVELVRLDDVPPARFDRTAEP 411
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI--TSNLNDSSQKF 349
++ +T+ + + + + I+T+ +IE + + +
Sbjct: 412 FPEMPSAPSDLPDFSATAEGAMERISQLPVEELMAQAINTLASIEALAAAESTRQAPAAA 471
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR--YIPSIGNNLQNFSQSGLND 407
L+ + + +L + + + R +++ + + ++ LQ+ ++
Sbjct: 472 VALLEETRALLNDPSTRALPGELRATVSDLRAILQELQQGRAVANLTAALQD-GARAADE 530
Query: 408 IQNLVRKLQETVNHFDDCLNN 428
I L V+ D
Sbjct: 531 IATASENLPALVDDLRDLAAK 551
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 32/87 (36%), Gaps = 2/87 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L I L + + E+I + G+ + +++R+ + +GR+ +
Sbjct: 24 LVWLVPLLALIVSLGIAWKSYSERGELIHIAFDNGSGVVANETTLRYRDVVIGRVEQVGF 83
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTAT 100
++ + + D + AT
Sbjct: 84 SED-LSRVSVAVRVDTDIAPFLDEDAT 109
>gi|315442588|ref|YP_004075467.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260891|gb|ADT97632.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 343
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/307 (14%), Positives = 98/307 (31%), Gaps = 8/307 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ SV +F V +L + I L T VR
Sbjct: 3 RERRTLVSVSIFTVVMLMVAASLIVVFGEFRFAAEDKYRAT---FTDASRLKTGQDVRIA 59
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
GIPVG + GL L+ + + + LY ST A IR + L G Y+E+++ +
Sbjct: 60 GIPVGTVEGLSLNPDNS--VEVEFTVNERYQLYTSTKAVIRYENLVGDRYLEITSGPGDL 117
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ T N + K+++ S + +++ L ++
Sbjct: 118 VKLPPGGTVVNTEPALDLDALLGGLKPVVKGLDGAKVNEISSAVIELLRGEGGALAAMLS 177
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + LA I ++ + D K D + + + +
Sbjct: 178 STSAFTQNLAARDQLIGDVITNLNTVLGTVDEKGAE---FDASVDQLQKLITGLAEGRDP 234
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
I I + ++ + + ++ + + Q++D +D + ++ +
Sbjct: 235 IAGAIGPLATAENDLTEMLETSRRPIQGVIENVRPFAQRMDERKADVNKVIEPLAENYLR 294
Query: 302 ENIADST 308
N +
Sbjct: 295 LNALGAY 301
>gi|294506236|ref|YP_003570294.1| paraquat-inducible protein B [Salinibacter ruber M8]
gi|294342564|emb|CBH23342.1| putative paraquat-inducible protein B [Salinibacter ruber M8]
Length = 344
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 43/113 (38%), Gaps = 5/113 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T +GLFVV L + S Q+ I SV+GL + V+F
Sbjct: 1 MSQRVSPTLIGLFVVGALALGVVGVGAFG-SGQFFEQRTTFISYFDESVNGLDVGAPVKF 59
Query: 61 NGIPVGRIVGLFLD---QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+P+G + + L + + I D P+ +T A + +
Sbjct: 60 KGVPIGEVTDINLRVDLENETFQVPVQYAINLD-PVTDTTGARLNLDDPTLLR 111
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 23/250 (9%), Positives = 79/250 (31%), Gaps = 7/250 (2%)
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ T + + + + D I + ++ ++ + S+ Q
Sbjct: 91 LDPVTDTTGARLNLDDPTLLRDQIEDGLRAQLQLESIVTGKLYVELTYISDPDSAVYAQG 150
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
+ + ++G+ L+++ ++ + + ++ + + +
Sbjct: 151 PPSRLSIPTELSPLAKLGEGASGLVTNLRQFDVTQINENLVTFLVNANDKLEALDAEAIN 210
Query: 321 I----TDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQR 374
T + + + + ++ ++++ + + + + ++
Sbjct: 211 RSALSTIESVREVVESKEVRTALQDMPKATERLRATIKDAQALIQRLDRGVEPTADELEK 270
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
R T +++ R + + L S G + + L E + + ERNP
Sbjct: 271 TSRQLRATLKRMRRTMDEVDQTLSPNSGIGY-QMNEALSNLSEATEALRVLVQSLERNPS 329
Query: 435 DIVWGREKGS 444
+ GRE+
Sbjct: 330 MFLRGREEPP 339
>gi|320353201|ref|YP_004194540.1| Mammalian cell entry related domain-containing protein
[Desulfobulbus propionicus DSM 2032]
gi|320121703|gb|ADW17249.1| Mammalian cell entry related domain protein [Desulfobulbus
propionicus DSM 2032]
Length = 336
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 87/296 (29%), Gaps = 9/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K T VG FV++ + + +I L ++ + GS+ GL + V F
Sbjct: 1 MSKKANPTLVGAFVLTAIGLTIAAIVILGNI-KFKDDRFRCVAYFTGSLYGLDIGAPVTF 59
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + + + I+ L + R++ T + T
Sbjct: 60 RGVTIGRVSAVRISFDAQKNNYIIPVYIDIQQTPDLTNN-----RSENWHPDTIRAMLTE 114
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
++ Q+ + + + + + + + + + T
Sbjct: 115 LIDQGMRAQLKITSLLTGKLYIDLAFYPGTKAQLRGKDTDLFEIPTQVSGLEQITQTLET 174
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
++ I + + I+ I T + + NT+ S + A +
Sbjct: 175 MPLSEILHKTATALDGINSIINSKETRNALAALDTTMDRVNTLLGRADSEFPALAAELKK 234
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + + Q+ + + + L++
Sbjct: 235 GLTNFAALSATADRFLHTADKQLPGMSTEFKHLLSGLNATAASLTKTLNNIEQLTA 290
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/171 (9%), Positives = 53/171 (30%), Gaps = 3/171 (1%)
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
E + + K+ + +I +S + + + + +
Sbjct: 166 EQITQTLETMPLSEILHKTATALDGINSIINSKETRNALAALDTTMDRVNTLLGRADSEF 225
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENN--SLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + L FA L + + + + + + + T+ + + + +I
Sbjct: 226 PALAAELKKGLTNFAALSATADRFLHTADKQLPGMSTEFKHLLSGLNATAASLTKTLNNI 285
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
S +R+++ + ++NP +++G+ + S
Sbjct: 286 EQLTAKDSLLSY-QAGASLREIERAAASIRQLTDYLQQNPNALLFGQGEDS 335
>gi|326383094|ref|ZP_08204783.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198230|gb|EGD55415.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 418
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 78/283 (27%), Gaps = 11/283 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + G+ V+++L F I S GL + VR
Sbjct: 4 SKRVWAIIAGVVVIALLAVGVFFGVQ--------KATTRTITAYFPSASGLYSGDPVRVI 55
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +G++ + I +TP+ A I Q L +I+L+ + +
Sbjct: 56 GVNIGKVSDIE---TRRGDVKITMRIDKNTPIPSDARAVIVAQSLVSGRFIQLTPVYSKG 112
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + +R + + + I+ +++ L+
Sbjct: 113 DQLQDGDSIPMERTAVPMEWDDVKKQLDELTKAVGPKGAEPGTAADAIDVMDQNLSGNGK 172
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
I ++ + + T S + + A +
Sbjct: 173 AIADSIKQMSTVMGTLSDNRDDVFGTIKSLQKLTEALSTSHEQLVQFNGRMASVSDVLAG 232
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+++ + N ++ ++ + + ++
Sbjct: 233 SSDDLGDAMTNLNEAVSELEGFLGTNSGVVTSTMGKLAQLTGT 275
>gi|295084767|emb|CBK66290.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Bacteroides
xylanisolvens XB1A]
Length = 297
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 96/290 (33%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I WL + + P + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIVALCVLIYGINWLKGIHMF-QPSSYFYAKFK-NVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG + ++ D P + + + + + + ++A + ++ + G+ L
Sbjct: 59 DGVRVGIVRDIYYDYAKPGNVIVEVELDTELRIPKGSSAELVSELMGGVRMNILLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K T + + + + + +
Sbjct: 119 EKYAV------GDTIPGTLNNGMMESAAKLIPKVEEMLPKLDSILISLNNILGDKSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +T +S K + + + +S + + +L ++ A +K++
Sbjct: 173 LHSIEKTTANLAVVSSQVKGLMSNDIPQLTSKLNTIGDNFVVISGNLKEVDYAATFKKID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L N+++ + + + +D + LL D
Sbjct: 233 ETLANVKILTEKLNSKDNTIGLLFNDP-TLYNNLNATTENAASLLEDLKE 281
>gi|328954041|ref|YP_004371375.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
gi|328454365|gb|AEB10194.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
Length = 315
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 44/145 (30%), Gaps = 12/145 (8%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +G+FVV + S+ S ++ + ++ SV GL+ + V F
Sbjct: 1 MAKQANRMMIGVFVVLAVILMAASLVVFG-SGKFFKKTVKCVLYFDESVKGLNVGAPVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALIRPDT--------PLYPSTTATIRTQGLAGI 109
G+ +G + + L + PD + I G+
Sbjct: 60 QGVQIGSVTSIVLQVDPAKLQPQIPVTIEFEPDRFKVHAEGGKIPREPRKNIAKLIDKGL 119
Query: 110 TYIELSTLRKEKKTIFQIATERNQR 134
+ + + +I
Sbjct: 120 RAVLTMQSFITGQLMIEIDFHPGTP 144
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 55/172 (31%), Gaps = 17/172 (9%)
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS--NLND 344
+ T T + + + I +N + I L D
Sbjct: 149 NIGKDFIEIPTIPSTSERLAQTLDKLDLEGLKKHLESTLAGIDRFVNGPDLIAGIRALKD 208
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ Q +++ K+ + N L D ++++ + + +G L S
Sbjct: 209 TLQDVRKIVVKMEG-----QINPLADDVKKSVKDIGKLARNAEAKLDPLGTGLDKTMSSV 263
Query: 405 LN----------DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
++QN ++++ F N E++P+ ++ G++ K
Sbjct: 264 RGIISEDSPLIVELQNTMKEISAMSRSFRQLANYLEQHPETVIRGKKSPGGK 315
>gi|315441811|ref|YP_004074690.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260114|gb|ADT96855.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 520
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/284 (10%), Positives = 84/284 (29%), Gaps = 5/284 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F + + +Y+L + + +P S GL +V
Sbjct: 1 MLTRFIKIQLIIFTILTVVALGVLGLYYLRLPSLVGVGQYTLYAELPRS-GGLYPTGNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G +G++ + + + A I + + TA + + G Y++L +
Sbjct: 60 YRGTQIGKVTEVEPTETG---ARATMSIDNEYKVPADATANVHSVSAIGEQYLDLVSTSG 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + T P+ A +KI + + + L
Sbjct: 117 TTQYLSPGQTITEGTVPSEVGPTIDAANDGLAVLPKEKIDALLTETSEAVGGLGPSLQRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + ++ +N+ + +++ S ++ A +
Sbjct: 177 VDSTTNLAEGFRDNLPQVTDIINNAAPILDSQVQSGDAIEQWSRNLNVIASQTAEQDAAL 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
L+ + + V + ++ ++ +
Sbjct: 237 RSGLQQAAPTLDQVNTVFSDVQEALPQTLANLAVVNDMLKRYNK 280
>gi|145221301|ref|YP_001131979.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213787|gb|ABP43191.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 520
Score = 90.4 bits (221), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/284 (10%), Positives = 84/284 (29%), Gaps = 5/284 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F + + +Y+L + + +P S GL +V
Sbjct: 1 MLTRFIKIQLIIFTILTVVALGVLGLYYLRLPSLVGVGQYTLYAELPRS-GGLYPTGNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G +G++ + + + A I + + TA + + G Y++L +
Sbjct: 60 YRGTQIGKVTEVEPTETG---ARATMSIDNEYKVPADATANVHSVSAIGEQYLDLVSTSG 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + T P+ A +KI + + + L
Sbjct: 117 TTQYLSPGQTITEGTVPSEVGPTIDAANDGLAVLPKEKIDALLTETSEAVGGLGPSLQRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + ++ +N+ + +++ S ++ A +
Sbjct: 177 VDSTTNLAEGFRDNLPQVTDIINNAAPILDSQVQSGDAIEQWSRNLNVIASQTAEQDAAL 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
L+ + + V + ++ ++ +
Sbjct: 237 RSGLQQAAPTLDQVNTVFSDVQEALPQTLANLAVVNDMLKRYNK 280
>gi|237814075|ref|YP_002898526.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei MSHR346]
gi|237506865|gb|ACQ99183.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei MSHR346]
Length = 183
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|217424863|ref|ZP_03456360.1| mce family protein [Burkholderia pseudomallei 576]
gi|217392319|gb|EEC32344.1| mce family protein [Burkholderia pseudomallei 576]
Length = 188
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|134283226|ref|ZP_01769927.1| mce family protein [Burkholderia pseudomallei 305]
gi|134245421|gb|EBA45514.1| mce family protein [Burkholderia pseudomallei 305]
Length = 195
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|126442158|ref|YP_001060679.1| mce family protein [Burkholderia pseudomallei 668]
gi|126221651|gb|ABN85157.1| mce family protein [Burkholderia pseudomallei 668]
Length = 189
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|76811208|ref|YP_335066.1| ABC transporter periplasmic substrate-binding protein [Burkholderia
pseudomallei 1710b]
gi|254190370|ref|ZP_04896878.1| mce family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254259524|ref|ZP_04950578.1| mce family protein [Burkholderia pseudomallei 1710a]
gi|76580661|gb|ABA50136.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia pseudomallei 1710b]
gi|157938046|gb|EDO93716.1| mce family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254218213|gb|EET07597.1| mce family protein [Burkholderia pseudomallei 1710a]
Length = 188
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|254180407|ref|ZP_04887005.1| mce family protein [Burkholderia pseudomallei 1655]
gi|184210946|gb|EDU07989.1| mce family protein [Burkholderia pseudomallei 1655]
Length = 191
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|53720755|ref|YP_109741.1| hypothetical protein BPSL3148 [Burkholderia pseudomallei K96243]
gi|67641603|ref|ZP_00440379.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei GB8 horse 4]
gi|121600722|ref|YP_994513.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei SAVP1]
gi|124384051|ref|YP_001027758.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei NCTC 10229]
gi|126450160|ref|YP_001082295.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei NCTC 10247]
gi|126454511|ref|YP_001067963.1| mce family protein [Burkholderia pseudomallei 1106a]
gi|167002606|ref|ZP_02268396.1| mce family protein [Burkholderia mallei PRL-20]
gi|226198206|ref|ZP_03793777.1| mce family protein [Burkholderia pseudomallei Pakistan 9]
gi|242314966|ref|ZP_04813982.1| mce family protein [Burkholderia pseudomallei 1106b]
gi|254174939|ref|ZP_04881600.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei ATCC 10399]
gi|254198576|ref|ZP_04904997.1| mce family protein [Burkholderia pseudomallei S13]
gi|254201318|ref|ZP_04907682.1| mce family protein [Burkholderia mallei FMH]
gi|254206660|ref|ZP_04913011.1| mce family protein [Burkholderia mallei JHU]
gi|254300643|ref|ZP_04968088.1| mce family protein [Burkholderia pseudomallei 406e]
gi|254357285|ref|ZP_04973559.1| mce family protein [Burkholderia mallei 2002721280]
gi|52211169|emb|CAH37158.1| putative membrane protein [Burkholderia pseudomallei K96243]
gi|121229532|gb|ABM52050.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei SAVP1]
gi|124292071|gb|ABN01340.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei NCTC 10229]
gi|126228153|gb|ABN91693.1| mce family protein [Burkholderia pseudomallei 1106a]
gi|126243030|gb|ABO06123.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei NCTC 10247]
gi|147747212|gb|EDK54288.1| mce family protein [Burkholderia mallei FMH]
gi|147752202|gb|EDK59268.1| mce family protein [Burkholderia mallei JHU]
gi|148026349|gb|EDK84434.1| mce family protein [Burkholderia mallei 2002721280]
gi|157810604|gb|EDO87774.1| mce family protein [Burkholderia pseudomallei 406e]
gi|160695984|gb|EDP85954.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei ATCC 10399]
gi|169655316|gb|EDS88009.1| mce family protein [Burkholderia pseudomallei S13]
gi|225929726|gb|EEH25742.1| mce family protein [Burkholderia pseudomallei Pakistan 9]
gi|238522556|gb|EEP86000.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia mallei GB8 horse 4]
gi|242138205|gb|EES24607.1| mce family protein [Burkholderia pseudomallei 1106b]
gi|243061711|gb|EES43897.1| mce family protein [Burkholderia mallei PRL-20]
Length = 186
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIELDKQYPFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|146328852|ref|YP_001209754.1| mce related family protein [Dichelobacter nodosus VCS1703A]
gi|146232322|gb|ABQ13300.1| mce related family protein [Dichelobacter nodosus VCS1703A]
Length = 270
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 32/125 (25%), Positives = 47/125 (37%), Gaps = 1/125 (0%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG FV+ + FF SR + I G V GL + V +G+ +G+I
Sbjct: 10 VVGFFVLLAVGGLFFLGLKASRLGGFQAQDTYRIYARFGDVSGLGKQAMVSMSGVQIGQI 69
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
G+ LD + + I L +TA I T GL G YI + + +
Sbjct: 70 SGMTLDPKT-AEVVVSLDIDGRFSLPADSTAQILTAGLLGEKYIGILSGESKDVLKQDDT 128
Query: 129 TERNQ 133
R
Sbjct: 129 LIRTG 133
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 36/90 (40%), Gaps = 2/90 (2%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ + ++ + GL+ D+ V G+ +GR+ + LDQE + I
Sbjct: 147 GGKGNFYPESSYLLEAKFNDISGLTIDAPVTLAGVQIGRVKSIHLDQETFMAV-VQLEID 205
Query: 89 PDT-PLYPSTTATIRTQGLAGITYIELSTL 117
L ++A I + + G YI +S
Sbjct: 206 RQFNRLPIDSSADILSTSIIGGKYIGISVG 235
>gi|54027604|ref|YP_121846.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54019112|dbj|BAD60482.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 346
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 46/119 (38%), Gaps = 5/119 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +G + +I+ + W + + G V GL VR
Sbjct: 1 MSIRKP--LIGFSIFAIVSILVTVLVWNTLARTVSGGTNTYTAVFTD-VLGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPN--HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG++ + L ++ N + +++ D +Y T A +R Q L G Y+ L
Sbjct: 58 AGVRVGKVDKIELARDDRNASVAEVTFIVQRDQTIYEDTKALVRYQNLIGQRYVALEPG 116
>gi|328675484|gb|AEB28159.1| Mce-related protein [Francisella cf. novicida 3523]
Length = 177
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K + TSVG+F++ + F + +S ++ ++ + +V L T++SV
Sbjct: 1 MRNKYFETSVGIFIIVGVLCLLFLTFKVSGTSFKAFNTQEYTITADFK-NVGSLRTNASV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ +GR+ + L++ Y ++ I D + + +A+I G+ G Y+ LS
Sbjct: 60 KIAGVEIGRVTKIALEKSYNGFMAVVTMAINSDKKIPANYSASIAMSGILGDNYVALSPP 119
Query: 118 RKEKKTIFQIA 128
++ I IA
Sbjct: 120 SEDIMAIAGIA 130
>gi|253700133|ref|YP_003021322.1| hypothetical protein GM21_1508 [Geobacter sp. M21]
gi|251774983|gb|ACT17564.1| Mammalian cell entry related domain protein [Geobacter sp. M21]
Length = 356
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 40/346 (11%), Positives = 101/346 (29%), Gaps = 13/346 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG+F + L + + + S+ GL VR G+ VGRI
Sbjct: 8 KVGMFFLFGLIIL-GVLLEVGEKWNPFEKNVPYKTYLT-SITGLKVGDPVRLAGVDVGRI 65
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
G+ + + ++P T + T A +R L G ++ LS +
Sbjct: 66 KGIDILND---KIEINFEVKPGTRIKTDTVAGLRLTNLLGGQFLGLSFGSPNAPLLEPGG 122
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + I+ + N + K ++ + + + K ++ +
Sbjct: 123 VVKGKDV------ANIDIIVDNLSDVVKDAKVFVNNLDRNQDIVLKKISVMLDENRGNLR 176
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI--LENI 246
+NI+ I M + + ++ K++ + + L N
Sbjct: 177 ASISNINSITGKMDRGEGSLALLLNERKLFDDASGAVESLKVVAGKIERGEGTLGKLVND 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + D+ + +E+ K++ + + L +
Sbjct: 237 ESVYREASALITDLRAGAKDLNAGMKDVKEITAKVNRGEGTLGKLINDETLYVDLREASK 296
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + I++ + + + + +
Sbjct: 297 NVKEITQKINSGQGTLGKLVNEDQLYRDTTATLKKTERAMEGLGDA 342
>gi|78222486|ref|YP_384233.1| virulence factor MCE-like protein-related protein [Geobacter
metallireducens GS-15]
gi|78193741|gb|ABB31508.1| Mammalian cell entry-related protein [Geobacter metallireducens
GS-15]
Length = 347
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 41/364 (11%), Positives = 117/364 (32%), Gaps = 23/364 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG F ++ L + L + S GL VR G+ VG+I
Sbjct: 6 KVGFFFIAGLVLL-GVMLELGEKWNPFQKAIPYKTYLS-STTGLKLGDPVRLAGVEVGKI 63
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + ++P T + + ATIR L G ++ LS + + +
Sbjct: 64 TKIAIA---DSRVEVAFEVKPGTAIKADSVATIRLTNLLGGQFLGLSFGSPDAPVLPPGS 120
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+++ + I+ + N + +K + + + + + +++ +
Sbjct: 121 AVKSRET------ANIDVIVDNVGDLAKDAKVLIKDLTVNQKEVFQKVSSMLDENRGNLR 174
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
N++ I M Q + + + T+ + + K + A + + + +
Sbjct: 175 GAIENMNSITTKMDRGQGSLALLLNDKSLYRNTNELAASMKNVTAKIEKGEGSLGKFVND 234
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
D + + + I + + + S E++ +
Sbjct: 235 ------------DAFYRDAKGAVANLNDGAKDIKEIAAKINRGEGSVGKLVNDESLYNEL 282
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ ++ + + + Q + + + + + + +K + +++ + S+
Sbjct: 283 RDASKNVGEVAKKINNGQGTLGKLVNDDTLYRDTTAAMKKLDKATEGLSDTGPISVIGSM 342
Query: 369 FKDA 372
Sbjct: 343 VGTL 346
>gi|145589255|ref|YP_001155852.1| hypothetical protein Pnuc_1072 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047661|gb|ABP34288.1| Mammalian cell entry related domain protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 309
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 92/286 (32%), Gaps = 21/286 (7%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M + + Y +G+FV++ + I S Q+ + + SV GL ++V
Sbjct: 1 MSNNSNPNYFRLGVFVLAAIGVLIAVILIFG-SGQFFKKSFTIETYLKQSVTGLDAGAAV 59
Query: 59 RFNGIPVGRIVGLFLDQE----------YPNHSLAKALIRPDTP--------LYPSTTAT 100
RF G+ +G++ + L + + L + I D + + A
Sbjct: 60 RFRGVKIGQVTQIALTGDIYETNMPFDQRRQYVLVRMQIYGDKVGQEQIADFVENNLRAR 119
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
I++QG+ G++Y+E + + + +I + P+ + I+ + ++
Sbjct: 120 IKSQGITGVSYVEFDFVSSAHDYPQLPYSWKPDYPVIPSLPNQTDEIIAGIQKLIGALNQ 179
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ ++ + ++ T
Sbjct: 180 MNIDGSVKKMDLVLDNLNVMMAGNGKDNQGVIQTVKELNVILTRVNNVTDKGELKALMDQ 239
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
T+ + ++NI+ +S N + S + +
Sbjct: 240 LVAATTSLRQTITSVQGDTTLTMDNIKQASENLNEFSRIISQSPSS 285
>gi|237809665|ref|YP_002894105.1| Mammalian cell entry related domain-containing protein [Tolumonas
auensis DSM 9187]
gi|237501926|gb|ACQ94519.1| Mammalian cell entry related domain protein [Tolumonas auensis DSM
9187]
Length = 171
Score = 90.4 bits (221), Expect = 6e-16, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG F+++ +F ++ + + ++ GL S V+
Sbjct: 1 MKFSKIEFLVGCFMLAGIFAGVMLALQVAGLTFGNKGDTYSLYANFDNIGGLKVRSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + +D + + I + L ++TA I T GL G YI ++
Sbjct: 61 GGVVIGRVSDISIDAKSFTP-KVEMQIDENYNQLSDTSTAAILTSGLLGEQYIGITPGFS 119
Query: 120 EKKT 123
+++
Sbjct: 120 DEEM 123
>gi|325105496|ref|YP_004275150.1| Mammalian cell entry related domain protein [Pedobacter saltans DSM
12145]
gi|324974344|gb|ADY53328.1| Mammalian cell entry related domain protein [Pedobacter saltans DSM
12145]
Length = 324
Score = 90.0 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/302 (10%), Positives = 95/302 (31%), Gaps = 4/302 (1%)
Query: 1 MES--KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
ME+ K +VG+F+ + ++ L + E+ + + GL T ++V
Sbjct: 1 MENTDKKRGITVGIFIFLGIAIFLLGVFTLGGQKKTFVKTFELNVVF-DDIQGLKTGNNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
F+G+ +G I + ++ A+I + GL G + +
Sbjct: 60 WFSGVKIGTIKKIQFYGTSQVQVSLSIDESAHQYIHKDAKASISSDGLIGNKIVVIDGGS 119
Query: 119 KEKKTIFQIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + N+ + N + + ++++ + + +T
Sbjct: 120 VKFPFVEDGDQLQVNKTLSTDDIMKTLQVNNRNLVDITTDFKILAKNLVEGKGTVGALMT 179
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ V N + ++ S+ N + ++ K
Sbjct: 180 DEQIATNFKTIVANLNNTTASANKMAVELNKFSNKLNNEEGFVNRIMADTIMFRKLETSV 239
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
Q + + + + +N + ++ +++ +++ + + + +
Sbjct: 240 AEFQSMAKSAAVATENLNKASAQLNNNDNALGLLLNDKKTAEQLKNVMGNLEASSQKLDE 299
Query: 298 SA 299
+
Sbjct: 300 NM 301
>gi|186474976|ref|YP_001856446.1| hypothetical protein Bphy_0207 [Burkholderia phymatum STM815]
gi|184191435|gb|ACC69400.1| Mammalian cell entry related domain protein [Burkholderia phymatum
STM815]
Length = 320
Score = 90.0 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF V ++ + + + P + +V GL D++VR+
Sbjct: 1 MENKSHAFWAGLFTVVMVAAIAAAAFLFNVDRSVRIP---FDLIARTNVTGLYPDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D+E+P L + L+ + P+ ST ++ QG+ G+ +I+L ++
Sbjct: 58 RGLDVGKVQSIKFDREHPGQILIRILVDKNAPITHSTFGSLGLQGVTGLAFIQLDDTGRD 117
Query: 121 KKTIFQIA 128
+ A
Sbjct: 118 TTPLASSA 125
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/177 (8%), Positives = 48/177 (27%), Gaps = 2/177 (1%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
++ +D L + ++ E + + S ++ +
Sbjct: 122 ASSAKSVAQLPMRPGLLDQLQARGDILIRQLEKTVRDVDALLSPEMRDQLLATAASLQHA 181
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS--LFKDAQRAMHTFRDT 382
+ + + L D+ + ++ N + L + +
Sbjct: 182 ADGVTTLTAQMGPAVGKLPDTLTALDQTLASTNRMITNLNRPDGPLEGTLNKVGTAAQQA 241
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + ++ + L + +L ++ V D F P +++G
Sbjct: 242 GDALTAMNATLQDISARVGYDTLPRVNSLADDVRSAVRSVDRAAETFSETPNSVLFG 298
>gi|241668210|ref|ZP_04755788.1| cell entry related family protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254876745|ref|ZP_05249455.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842766|gb|EET21180.1| conserved hypothetical protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 243
Score = 90.0 bits (220), Expect = 6e-16, Method: Composition-based stats.
Identities = 37/218 (16%), Positives = 79/218 (36%), Gaps = 3/218 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+ GLFV+ ++F F ++LS + + S+ GL+ S V +
Sbjct: 3 ENSIKNLIAGLFVIFMVFVMVFIGFFLSG-GFKNQDTTTFVTNFK-SISGLNVGSDVSYK 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKE 120
G +G++ + +++E P I P+Y T AT+++ G+ G + ++
Sbjct: 61 GFNIGKVSDISINKENPKLVSVYMKINSQIPIYKQTVATLQSVGITGQSKVELSLDISEK 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I + + A I + PS + ++ + + + S K++
Sbjct: 121 NTSLDLIDLRKGKIAEIRSKPSQLETILNKVNGIAGSLEEISGKFNKMMSQENIQRFNEF 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
A+ I +N S +
Sbjct: 181 ADSLNILLYNLSNSSIYFNRTLMNFNDTMLEGQETFSR 218
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 85/245 (34%), Gaps = 12/245 (4%)
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ I ++ V ++ + D + + ++ + VS F
Sbjct: 4 NSIKNLIAGLFVIFMVFVMVFIGFFLSGGFKNQDTTTFVTNFKSISGLNVGSDVSYKGFN 63
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
I+ + + + ++ +I ++ T ++ S +S
Sbjct: 64 IGKVSDISINKENPKLVSVYMKINSQIPIYKQTVATLQSVGITGQSKVELSLDISEKNTS 123
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ I + +I S + +E I + +N + E+ K N + + +
Sbjct: 124 LDLIDLRKGKIAEIRSKPSQLETILNKVNGIAGSLEEISGKFNKMMSQENIQR------- 176
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
F + ++ +N + ++ N+ + L + + + + QET + + ++ + +P
Sbjct: 177 ----FNEFADSLNILLYNLSNS-SIYFNRTLMNFNDTMLEGQETFSRLNRVISILDYDPS 231
Query: 435 DIVWG 439
IV G
Sbjct: 232 TIVRG 236
>gi|283788168|ref|YP_003368033.1| putative organic solvent tolerance protein [Citrobacter rodentium
ICC168]
gi|282951622|emb|CBG91322.1| putative organic solvent tolerance protein [Citrobacter rodentium
ICC168]
Length = 188
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S VR
Sbjct: 6 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSMRTEPTYTLYATFDNIGGLKVRSPVRI 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 66 GGVVVGRVADISLDPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 124
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + +
Sbjct: 125 DPELGTSILKDGGTIQDTKSAMVLEDM 151
>gi|301062324|ref|ZP_07202987.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300443528|gb|EFK07630.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 351
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 38/355 (10%), Positives = 115/355 (32%), Gaps = 23/355 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K T +G FVV + + ++ E + GSV GL+ + V
Sbjct: 1 MNGKASKTLIGAFVVGAVILIVAGLMVFGG-GKFMKRTQEFVCFFEGSVKGLNMGAPVLL 59
Query: 61 NGIPVGRIVGLFLDQEYP---NHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELST 116
G+ +G + + ++ I D L I +
Sbjct: 60 GGVKIGSVKSITVEYNQKILTFFVPVVIEIELDKIRLVKGKRIPI-------DEMLPRLI 112
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + Q + + + + +I Q I E ++K
Sbjct: 113 KKGLRAQLNMGSFITGQLIIELDYYPNTSVQLLGLSSEYPEIPTIPSTFQAIFETLKK-- 170
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+E L + + + ++ + ++ + + L+ +++ + +
Sbjct: 171 ----LPLEETLRNLISAVQTFENILKSPEIPEILKSANLALADVRRLVNNVNDRVGPLAE 226
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ E ++++N + N V++ + + +K+ L + + +++
Sbjct: 227 DLDATVAEYKKIATNVNENVDPLMENVNDTVKDARILVKNLDEKVKSLATKIAEGLEASH 286
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
E + + ++ S + + + ++ +T+ + + ++ + +
Sbjct: 287 -----EAMEQARKTLKLFQSRLGKDSPLLNQLENTLREFDEMARSIRSLADYLSR 336
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/175 (10%), Positives = 57/175 (32%), Gaps = 4/175 (2%)
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ-RQKIIS 330
+T + + + + S + + +AD + + + + + +
Sbjct: 175 ETLRNLISAVQTFENILKSPEIPEILKSANLALADVRRLVNNVNDRVGPLAEDLDATVAE 234
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTSEKINR 388
N+ N++ + + + + + SL + + E+ +
Sbjct: 235 YKKIATNVNENVDPLMENVNDTVKDARILVKNLDEKVKSLATKIAEGLEASHEAMEQARK 294
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ + L S LN ++N +R+ E + R+P+ ++ G+
Sbjct: 295 TLKLFQSRLGKDS-PLLNQLENTLREFDEMARSIRSLADYLSRHPEALLRGKSPS 348
>gi|161522848|ref|YP_001585777.1| hypothetical protein Bmul_5822 [Burkholderia multivorans ATCC
17616]
gi|189348316|ref|YP_001941512.1| paraquat-inducible protein B [Burkholderia multivorans ATCC 17616]
gi|160346401|gb|ABX19485.1| Mammalian cell entry related domain protein [Burkholderia
multivorans ATCC 17616]
gi|189338454|dbj|BAG47522.1| paraquat-inducible protein B [Burkholderia multivorans ATCC 17616]
Length = 431
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 43/433 (9%), Positives = 106/433 (24%), Gaps = 29/433 (6%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS-SVRFNGIPVGRIVGLFLDQEY 77
+ + WL+ V + G+ D V G+ VG++ G+ L +
Sbjct: 27 VATLGVVGWLA-IRALAERGETVTVVFSD-AHGMKVDDTEVTLRGVKVGKLSGIALSPDG 84
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
H A I Y + G + + A ++
Sbjct: 85 -QHVEATLAIARAEEQYLRS----------GTRFFLRGAQPEMSDPSSLRALVVGPEIVM 133
Query: 138 TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI 197
P E + ++ + ++ +
Sbjct: 134 EPGPGRPARHFDGTERRPALAPRHGPVVSYVVRFAGAAGELKDGAPVKLRGFQVGTVTRV 193
Query: 198 DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSS 257
+ + + + + +
Sbjct: 194 RLSYDVASEQLGTPVQIALEPSALGITGVQPPADGNWRPIVDRMLGRLVARGLRARLVQD 253
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
++ + + ++ S + + A + +
Sbjct: 254 PPLVGARMISLDFVRDAPAATLAAAEGPAEIPSVESADFDAI----AARANDIAGKIDAL 309
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
T + I+ + L DS +++I+ + +
Sbjct: 310 PIRETGDDVRNIAARINALAASPQLRDSLAHIDRSVAQIDRTL-----QQVSPQIGPLVA 364
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
RDT+ ++ + S L + + + + +R+L +T + +R+P+ IV
Sbjct: 365 QLRDTANAADQAVASARRTLDD-DGTAESSLPAALRELTDTARSVRALADYLDRHPEAIV 423
Query: 438 WGREKGSVKIYKP 450
GR + KP
Sbjct: 424 RGR-----REEKP 431
>gi|89255922|ref|YP_513284.1| ABC transporter, periplasmic protein [Francisella tularensis subsp.
holarctica LVS]
gi|115314404|ref|YP_763127.1| organic solvent ABC superfamily substrate-binding protein
[Francisella tularensis subsp. holarctica OSU18]
gi|118496936|ref|YP_897986.1| hypothetical protein FTN_0326 [Francisella tularensis subsp.
novicida U112]
gi|167009175|ref|ZP_02274106.1| hypothetical protein Ftulh_00185 [Francisella tularensis subsp.
holarctica FSC200]
gi|169656536|ref|YP_001427976.2| ABC transporter periplasmic protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|187931163|ref|YP_001891147.1| ABC transporter, periplasmic protein [Francisella tularensis subsp.
mediasiatica FSC147]
gi|254367280|ref|ZP_04983307.1| ABC transporter, periplasmic protein [Francisella tularensis subsp.
holarctica 257]
gi|254368756|ref|ZP_04984769.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|254372306|ref|ZP_04987797.1| ABC transporter [Francisella tularensis subsp. novicida GA99-3549]
gi|290953703|ref|ZP_06558324.1| ABC transporter, periplasmic protein [Francisella tularensis subsp.
holarctica URFT1]
gi|295312938|ref|ZP_06803657.1| ABC transporter, periplasmic protein [Francisella tularensis subsp.
holarctica URFT1]
gi|89143753|emb|CAJ78955.1| ABC transporter, periplasmic protein [Francisella tularensis subsp.
holarctica LVS]
gi|115129303|gb|ABI82490.1| possible organic solvent ABC superfamily ATP binding cassette
transporter, binding protein [Francisella tularensis
subsp. holarctica OSU18]
gi|118422842|gb|ABK89232.1| conserved hypothetical protein [Francisella novicida U112]
gi|134253097|gb|EBA52191.1| ABC transporter, periplasmic protein [Francisella tularensis subsp.
holarctica 257]
gi|151570035|gb|EDN35689.1| ABC transporter [Francisella novicida GA99-3549]
gi|157121677|gb|EDO65847.1| conserved hypothetical protein [Francisella tularensis subsp.
holarctica FSC022]
gi|164551604|gb|ABU61020.2| ABC transporter, periplasmic component [Francisella tularensis
subsp. holarctica FTNF002-00]
gi|187712072|gb|ACD30369.1| ABC transporter, periplasmic protein [Francisella tularensis subsp.
mediasiatica FSC147]
gi|328676408|gb|AEB27278.1| Mce-related protein [Francisella cf. novicida Fx1]
Length = 177
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K + TSVG+F++ + F + +S ++ ++ + +V L T++SV
Sbjct: 1 MRNKYFETSVGIFIIIGVLCLLFLTFKVSGTSFKAFNTQEYTITADFK-NVGSLRTNASV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ +GR+ + L++ Y ++ I D + + +A+I G+ G Y+ LS
Sbjct: 60 KIAGVEIGRVTKIALEKSYNGFMAVVTMAINSDKKIPANYSASIAMSGILGDNYVALSPP 119
Query: 118 RKEKKTIFQIA 128
++ I IA
Sbjct: 120 SEDIMAIAGIA 130
>gi|110671101|ref|YP_667658.1| ABC transporter, periplasmic protein,pseudogene [Francisella
tularensis subsp. tularensis FSC198]
gi|134301424|ref|YP_001121392.1| hypothetical protein FTW_0324 [Francisella tularensis subsp.
tularensis WY96-3418]
gi|224457823|ref|ZP_03666296.1| hypothetical protein FtultM_09463 [Francisella tularensis subsp.
tularensis MA00-2987]
gi|254371263|ref|ZP_04987265.1| ABC transporter [Francisella tularensis subsp. tularensis FSC033]
gi|254875494|ref|ZP_05248204.1| ABC transporter [Francisella tularensis subsp. tularensis
MA00-2987]
gi|255961466|ref|YP_003097806.1| ABC transporter, periplasmic protein,pseudogene [Francisella
tularensis subsp. tularensis SCHU S4]
gi|110321434|emb|CAL09626.1| ABC transporter, periplasmic protein,pseudogene [Francisella
tularensis subsp. tularensis FSC198]
gi|134049201|gb|ABO46272.1| hypothetical protein, mammalian cell entry (MCE) domain
[Francisella tularensis subsp. tularensis WY96-3418]
gi|151569503|gb|EDN35157.1| ABC transporter [Francisella tularensis subsp. tularensis FSC033]
gi|240248244|emb|CAG46243.2| ABC transporter, periplasmic protein,pseudogene [Francisella
tularensis subsp. tularensis SCHU S4]
gi|254841493|gb|EET19929.1| ABC transporter [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159867|gb|ADA79258.1| hypothetical protein NE061598_09045 [Francisella tularensis subsp.
tularensis NE061598]
Length = 177
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K + TSVG+F++ + F + +S ++ ++ + SV L T++SV
Sbjct: 1 MRNKYFETSVGIFIIIGVLCLLFLTFKVSGTSFKAFNTQEYTITADFK-SVGSLRTNASV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ +GR+ + L++ Y ++ I D + + +A+I G+ G Y+ LS
Sbjct: 60 KIAGVEIGRVTKIALEKSYNGFMAVVTMAINSDKKIPANYSASIAMSGILGDNYVALSPP 119
Query: 118 RKEKKTIFQIA 128
++ I IA
Sbjct: 120 SEDIMAIAGIA 130
>gi|308371368|ref|ZP_07667149.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu003]
gi|308329033|gb|EFP17884.1| MCE-family protein mce4B [Mycobacterium tuberculosis SUMu003]
Length = 338
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 86/282 (30%), Gaps = 6/282 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
V +F V +L + + GP L VR G+PVG
Sbjct: 2 IKVSVFAVVMLLVAAGLVVVFGDFR--FGPTTVYHATFTD-ASRLKAGQKVRIAGVPVGS 58
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L+ ++ I LY ST A IR + L G ++E+++ E + +
Sbjct: 59 VKAVKLNPDHS--IDVAFAIDRSYTLYSSTRAVIRYENLVGDRFLEITSGPGELRKLPPG 116
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
T + + + +IE ++ +
Sbjct: 117 GTINVAHTQPALDLDALLGGLRPV-LKGFDADKINTITSAVIELLQGQGGPLANVLADTG 175
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
A + + + + + + + + + + I I
Sbjct: 176 AFSAALGARDQLIGEVITNLNAVLATVDAKSAQFSASVDQLQQLVSGLAKNRDPIAGAIS 235
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
++ ++ + N+ ++ + + + ++D+ ++ +
Sbjct: 236 PLASTTTDLTELLRNSRRPLQGILENARPLATELDNRKAEVN 277
>gi|291277562|ref|YP_003517334.1| putative ABC transporter periplasmic substrate-binding protein
[Helicobacter mustelae 12198]
gi|290964756|emb|CBG40612.1| putative possible ABC transport system periplasmic
substrate-binding protein [Helicobacter mustelae 12198]
Length = 263
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 49/111 (44%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME +T +G+ SIL I + N ++ + G+ ++ VRF
Sbjct: 1 MERNVNFTIIGVIFFSILSALVIFIMIMGNFNLQKDEYTNYVVYTTKEITGIGVNTPVRF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GI +G + + D++ P+ I+ P+ +T +QGLAGIT+
Sbjct: 61 KGINIGSVTYVGFDKQNPDVVKIMVQIKKHIPIKEGSTLMADSQGLAGITF 111
>gi|119493274|ref|ZP_01624114.1| hypothetical protein L8106_30620 [Lyngbya sp. PCC 8106]
gi|119452747|gb|EAW33925.1| hypothetical protein L8106_30620 [Lyngbya sp. PCC 8106]
Length = 431
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 29/379 (7%), Positives = 113/379 (29%), Gaps = 16/379 (4%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+W+ + D ++ + P G+ + VR+ G+ VGR+ +
Sbjct: 24 VVAFWVQGL-RLDQSGYQLRVEFPD-ASGMQPGTPVRYRGVKVGRVTDIKPTSN---LVE 78
Query: 83 AKALIR-PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI---------FQIATERN 132
+ I D + GL ++++ + + +
Sbjct: 79 VQLEIDSSDLVIPRDVMIRSIQSGLLSDNFVDIIPKSPLLEEMKEVNPLSSDCPETVICD 138
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + + +++ S+ ++ L + +
Sbjct: 139 DTVLSGESGVSLERLMASLVEFSELYTNPELFQNINQAAARTALAADEVSKVSTKMTELV 198
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
I+ + + V ++I+ + + + ++ N + S
Sbjct: 199 EIARTELGSVSNSVDQGIGSFSTELSSISATLQNSTNEVTRATIESANSVQRAANEVSTI 258
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + + T + + ++ ++ + + + L N+ ++N
Sbjct: 259 SNEVQILIASNRSSLSTTLNNIESITGELSSTVASLNPILNQIQQGPLLNNLEVLSANAA 318
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + +++ + I ++ + + Q +L S ++++ + ++
Sbjct: 319 EASGNLLDLSKAVNDPETLIL-LQQTLDSARTTLQNVEKLTSDVDDLIGDPKVRENLREI 377
Query: 373 QRAMHTFRDTSEKINRYIP 391
+ ++++ +
Sbjct: 378 INGLGNILAYTDQLEQQTK 396
>gi|315441855|ref|YP_004074734.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260158|gb|ADT96899.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 342
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 7/136 (5%)
Query: 1 MESKNYYTS--VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K +G+FVV +F I ++ + +V GL++ V
Sbjct: 1 MTNKISAVLWRLGIFVVVCALGAFALIAVFAQLRFEREQRYTAVFA---NVSGLTSGDFV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ L + + L + A I+ L G Y+ +
Sbjct: 58 RIAGVEVGKVR--TLTVRDDSTVAVEFGADDSVVLTDGSRAVIKYDNLIGDRYLAIEEGA 115
Query: 119 KEKKTIFQIATERNQR 134
+ R
Sbjct: 116 GGTTKLRPGDAIPLDR 131
>gi|108798624|ref|YP_638821.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867720|ref|YP_937672.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126434221|ref|YP_001069912.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|145221250|ref|YP_001131928.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|108769043|gb|ABG07765.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693809|gb|ABL90882.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126234021|gb|ABN97421.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|145213736|gb|ABP43140.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 342
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 7/136 (5%)
Query: 1 MESKNYYTS--VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K +G+FVV +F I ++ + +V GL++ V
Sbjct: 1 MTNKISAVLWRLGIFVVVCALGAFALIAVFAQLRFEREQRYTAVFA---NVSGLTSGDFV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ L + + L + A I+ L G Y+ +
Sbjct: 58 RIAGVEVGKVR--TLTVRDDSTVAVEFGADDSVVLTDGSRAVIKYDNLIGDRYLAIEEGA 115
Query: 119 KEKKTIFQIATERNQR 134
+ R
Sbjct: 116 GGTTKLRPGDAIPLDR 131
>gi|262393184|ref|YP_003285038.1| ABC transporter, periplasmic component YrbD [Vibrio sp. Ex25]
gi|262336778|gb|ACY50573.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
sp. Ex25]
Length = 162
Score = 90.0 bits (220), Expect = 7e-16, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKTELWVGSFVLAGICAILVMIFQVADVKSIGSGDTYTLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +GR+ + L+ + I +++ I T GL G YI L
Sbjct: 64 VVIGRVSNISLNPDNLLPV-VTLSINSKYNQFPETSSVQILTSGLIGEQYIGLVPGFVFD 122
Query: 122 KTIFQIATER 131
+ + +
Sbjct: 123 DEVMLVDGDT 132
>gi|39996029|ref|NP_951980.1| mce-related protein [Geobacter sulfurreducens PCA]
gi|39982794|gb|AAR34253.1| mce-related protein [Geobacter sulfurreducens PCA]
gi|298505052|gb|ADI83775.1| ABC transporter, periplasmic substrate-binding protein, MCE
domain-containing [Geobacter sulfurreducens KN400]
Length = 360
Score = 90.0 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/351 (12%), Positives = 104/351 (29%), Gaps = 19/351 (5%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GLFV++ L F + + ++ P + + + V GL + V G+ VG +
Sbjct: 15 GLFVLAALAFFAGGVLIMGDKTKFFVPKGRLSVIMTD-VAGLKVGAPVWLAGVDVGIVTD 73
Query: 71 LFLD-QEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + E N A + + + + T++T+GL G Y+
Sbjct: 74 IRFERPEQSNEVEAVLEVDEEALKKIGRDSVITVKTRGLLGEKYV--------------- 118
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
++ + T + ++ +K ++ + ++ E+ T
Sbjct: 119 DITPTRQIIATPVTRLQGTSLPKLDDVVQKAGEAFERVNAVVAKTERGEGTLGRFASDPK 178
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
++ V + + + +A D Q E
Sbjct: 179 LYDNLVRLTVELNTIAGSVNRGEGTLGMLNRSREPYDRLMKILSRADDTLAEIQSSEGTL 238
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ D+++ +E+ +K+ + + ++ D
Sbjct: 239 SKLIRDRELYDKLVAVADKAGGAADEVRELNRKLVAKEGTLGLLLADRGFYDKGMSLIDR 298
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
SS+ I + + + + + + LN L+ I
Sbjct: 299 ADRSLSSLEEITTRLQRGEGTAGKLLSDKELYDKLNRMVDDLDLLVRDIKE 349
>gi|53802515|ref|YP_112709.1| Mce family protein [Methylococcus capsulatus str. Bath]
gi|53756276|gb|AAU90567.1| Mce family protein [Methylococcus capsulatus str. Bath]
Length = 304
Score = 90.0 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/285 (15%), Positives = 108/285 (37%), Gaps = 8/285 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + Y GLFVV + L Y ++ G+V GL+ +S V F
Sbjct: 1 MVRETYALLTGLFVVILGSALIGIALVLG---DYGTERDVYVVSTQGAVSGLNPESLVIF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ G++ + P L + + P+ T AT+R Q L G+ I+LS +
Sbjct: 58 RGVRAGKVASISFAPHDPRTILVRIEVDKGLPITRGTYATLRVQPLTGLAQIDLSDEGND 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK-IIENIEKPLTTT 179
+ + T+ A I PS ++ + + +I+ + + + + + + T
Sbjct: 118 PEPLR---TDPRNPANIPLRPSLLDKLTGSGSDILTQIAQLTSRLNALLDDGNRQRIAHT 174
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++T + L +I++ + + ++ +
Sbjct: 175 LESLDTAADELVRLERYIEEGLERIPILDGRLRQALADHSAMARDVRETSRQVRALSESA 234
Query: 240 NQILENIQVSSNNFVKSS-DQVINTVHDVRETTQTFQEVGQKIDH 283
++++ +S+ ++S ++ + D T + + + + ++
Sbjct: 235 QKVVDIGAAASDTLIRSRLPELDALIDDAAHTAASLRRLSKTLER 279
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 43/118 (36%), Gaps = 2/118 (1%)
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
+ I + + + + + + + + ++ L ++ AL +++++ +D +
Sbjct: 167 NRQRIAHTLESLDTAADELVRLERYIEEGLERIPILDGRLRQ--ALADHSAMARDVRETS 224
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
R SE + + +S L ++ L+ T ER+PQ
Sbjct: 225 RQVRALSESAQKVVDIGAAASDTLIRSRLPELDALIDDAAHTAASLRRLSKTLERDPQ 282
>gi|148259191|ref|YP_001233318.1| hypothetical protein Acry_0171 [Acidiphilium cryptum JF-5]
gi|326402344|ref|YP_004282425.1| hypothetical protein ACMV_01960 [Acidiphilium multivorum AIU301]
gi|146400872|gb|ABQ29399.1| Mammalian cell entry related domain protein [Acidiphilium cryptum
JF-5]
gi|325049205|dbj|BAJ79543.1| hypothetical protein ACMV_01960 [Acidiphilium multivorum AIU301]
Length = 166
Score = 90.0 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 28/133 (21%), Positives = 52/133 (39%), Gaps = 4/133 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ GL V+ SR+ G ++ GS+ L+ S V+
Sbjct: 1 MKNRVSEIIAGLVVIVAAAVFLAYA--ASRTRTVGGTGYDLRASF-GSIGPLTVGSPVKI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + LD + ++ + I+PD + ++A I + L G Y+ +S E
Sbjct: 58 AGVTIGEVTRTSLDPQTYA-AIVQFRIQPDVKIPKDSSAAIESASLLGSDYLSISPGGSE 116
Query: 121 KKTIFQIATERNQ 133
A Q
Sbjct: 117 TMLKPGQAITATQ 129
>gi|108763156|ref|YP_631905.1| Mce family protein [Myxococcus xanthus DK 1622]
gi|108467036|gb|ABF92221.1| Mce family protein [Myxococcus xanthus DK 1622]
Length = 509
Score = 90.0 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 44/354 (12%), Positives = 100/354 (28%), Gaps = 16/354 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGL V++ F + + + D V GL+ V+
Sbjct: 1 MKKLVTPFRVGLLVIAAGAFFVTFVLFARKGGLSDSESTRVWAYF-RDASGLAVRGRVQI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GIPVG I + L+ + IR D L T R++ L G ++L+ +
Sbjct: 60 AGIPVGEIDDISLEG---TRAKVWLKIRNDVDLREDAVVTKRSESLLGDYLLDLNPGTES 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ R + A+ + + + + +
Sbjct: 117 APHLGSGGQIRRVVDTQGMEAVFESLSQITADIQEVTGALREVLGGERGAGSLQRIVENL 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + I+ + + + +A + ++
Sbjct: 177 VRLSDSVDSTVRRNADRLDTI------------VGNVEAISADVRGITQGNQAEITRIID 224
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I + + V DV+ET + +E +K+D L + +
Sbjct: 225 NIEFITRDVRQVLGSVKNIVGTGEGDVKETVASLKETLKKLDGTLGNLEEITRKVRDGEG 284
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ + + + + + ++ + I S + + S
Sbjct: 285 AAGVLLADEAVGRELRETVQDVSRFTSRLTDLQAEIGIQSTYLAAQGNSKNVFS 338
>gi|183984677|ref|YP_001852968.1| MCE-family protein [Mycobacterium marinum M]
gi|183178003|gb|ACC43113.1| MCE-family protein [Mycobacterium marinum M]
Length = 343
Score = 89.6 bits (219), Expect = 8e-16, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 5/132 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ G F ++ + F + + + V L +VR G
Sbjct: 4 SRAMIIKFGAFAAVMIVLTVFLFFIFGQYRTGSTNGYS---ALFNDVSRLKPGETVRIAG 60
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L + L K + L T A +R L G Y+EL K
Sbjct: 61 VRVGTVNSVSLRTD--KKVLVKFDADRNIVLTTGTRAVVRYLNLVGDRYLELVDGPGSTK 118
Query: 123 TIFQIATERNQR 134
T+ + +R
Sbjct: 119 TLPAGSQIPIER 130
>gi|294775359|ref|ZP_06740881.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
gi|294450816|gb|EFG19294.1| conserved hypothetical protein [Bacteroides vulgatus PC510]
Length = 295
Score = 89.6 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/284 (12%), Positives = 86/284 (30%), Gaps = 8/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL ++ L F I +L N + + +++GL+ S V NG VG
Sbjct: 4 EVKIGLIGIAALAMLIFGINYLKGINMFQSANYYYVEY--TNINGLAGSSPVFANGYKVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + P H + + + + +T + T+ L + L +
Sbjct: 62 TVRNINYNYAKPGHVTVEVEVDKEMRIPKGSTGELVTEMLGTVKMNLLLNFNSTEYYQPG 121
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
A + + + + + + + P + +
Sbjct: 122 DTLPGKTNAGLMG-----AAEEKLVPQIEQMLPKMDSILYSLNKILADPALSATLHNAEK 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T + + M+ + + + + +L + A K++ L N+
Sbjct: 177 LTANLDVTTRQLNMLMQKDLPQLTGKLNTIADNFIAISDNLKGIDYASTFNKIDSTLYNV 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
Q+ + + + + +D Q LL D +
Sbjct: 237 QMLTEKLNRKDNSIGLLFNDP-TFYQNLSATTANAAILLEDLKA 279
>gi|90413008|ref|ZP_01221006.1| putative ABC superfamily transport protein [Photobacterium
profundum 3TCK]
gi|90326023|gb|EAS42462.1| putative ABC superfamily transport protein [Photobacterium
profundum 3TCK]
Length = 166
Score = 89.6 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 48/133 (36%), Gaps = 2/133 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+K VG F+++ + I+ ++ + ++ GL S ++ G
Sbjct: 11 NKKLELWVGTFIMAGIAALLVLIFKVADVQNLGTNDTYTLKAHFDNIGGLKVRSPIKVGG 70
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGRI + LD E I +++A I T GL G Y+ +S +
Sbjct: 71 VSVGRITDISLDTESFTPV-VTMAIEKKYGYFPETSSAAILTAGLLGEQYLGISPGFIDD 129
Query: 122 KTIFQIATERNQR 134
+ +
Sbjct: 130 DIEMLHDGDLMED 142
>gi|116749845|ref|YP_846532.1| hypothetical protein Sfum_2416 [Syntrophobacter fumaroxidans MPOB]
gi|116698909|gb|ABK18097.1| Mammalian cell entry related domain protein [Syntrophobacter
fumaroxidans MPOB]
Length = 359
Score = 89.6 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 49/449 (10%), Positives = 119/449 (26%), Gaps = 93/449 (20%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +G FV+ + I S + + I+ GSV GL+ +V F
Sbjct: 1 MSRQANPKVIGAFVIGAVALIVAGILVFG-SGRLFKDTQKCILFFEGSVKGLNIGGTVDF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG + + + + + I PD R + G +
Sbjct: 60 KGVRVGTVREIKVQLDRKDLSVKIPVIVEIEPD-----------RIAQVHGDGRKVPKEI 108
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+K K I + ER RA + + + + + E P
Sbjct: 109 KKGTKKILTVFVERGLRAQLKMQSFVTGQLYIDLDFYPDRPARFVAEGIGYPEIPTIPSN 168
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ L + + + +S D K ++
Sbjct: 169 LEALSKTFEKLPLEEIAGKLTSAIEGIERFINSPDLKGILSSSHQA-------------- 214
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + +++ L+ + ++K
Sbjct: 215 ---------------VNDVRALLHSIDSEIKPLAVNLNGAVDDARKLIRNVDDQVKPISA 259
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
++ A + +T +K+ + ++ + + + ++ +
Sbjct: 260 GIQG-----------TTTDARKVLTSVDRKVEPLLTNLDEAVRATRGAIAQADKTLAAVE 308
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+ + E +++ + +A+ +
Sbjct: 309 DFTG--ERSAVRYELIQALKELSAAA---------------------------------- 332
Query: 418 TVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ ER+P+ ++ G+EK K
Sbjct: 333 --RSLRVMADTLERHPEALLKGKEKQGGK 359
>gi|326315186|ref|YP_004232858.1| mammalian cell entry related domain-containing protein [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323372022|gb|ADX44291.1| Mammalian cell entry related domain protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 326
Score = 89.6 bits (219), Expect = 9e-16, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FVV + WL+R + SV GL ++VR+
Sbjct: 1 MENKSHALAAGIFVVVVAALLAGLGLWLTRDR---ASYQLYELSTRESVGGLQPQAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + P + L + + P+ P+T A + QG+ G+ ++ L
Sbjct: 58 KGVAVGKVTRIGFDPDVPGNVLIRIAVNDQAPVTPATFAVLGYQGVTGLAHVLLDDGNGP 117
Query: 121 KKTIFQIA 128
+ + + A
Sbjct: 118 QPALPRGA 125
Score = 41.5 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 15/158 (9%), Positives = 46/158 (29%), Gaps = 27/158 (17%)
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK-INNISALKEN 365
+ + + +++ + + + N ++ + + ++ A
Sbjct: 150 AQVQQATDRINDLLGDENQKRFSLALENLGQAAGSANALMKRLDATVEQRLDPALAS--V 207
Query: 366 NSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG--LNDIQNLVRKLQETVNH-- 421
+ DA+ + R + ++ S G L+ I + + L + +
Sbjct: 208 PGVASDARETLKALRQAGNNAGDAANEVKAAVRKLSAEGGPLDQIADSSQSLSQAADRFG 267
Query: 422 ------FDDCLNN--------------FERNPQDIVWG 439
+ + F NPQ +++G
Sbjct: 268 RVTLPRLNHAADETSRAARRLGRAASGFSDNPQSLIYG 305
>gi|322420103|ref|YP_004199326.1| Mammalian cell entry related domain-containing protein [Geobacter
sp. M18]
gi|320126490|gb|ADW14050.1| Mammalian cell entry related domain protein [Geobacter sp. M18]
Length = 356
Score = 89.6 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/344 (11%), Positives = 109/344 (31%), Gaps = 9/344 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG+F V L + + + S+ GL VR G+ VGRI
Sbjct: 8 KVGMFFVFGLIVL-GILLEVGEKWNPFERNIRYKTYLT-SITGLKVGDPVRLAGVDVGRI 65
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + ++P T + T A +R L G ++ LS + +
Sbjct: 66 TEIVVLND---KIEIDFEVKPGTRIKTDTVAGLRLTNLLGGQFLGLSFGSPGASPLPEGG 122
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
R + ++ ++T I + +R+ ++++ + L N+ +
Sbjct: 123 VVRGKDVANID--IIVDDLSDVVKDTKVLIKNLNRNQDEVLKKVSGMLDENRGNLREAIS 180
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+++ +D+ + + + + +T + + I+ + L N +
Sbjct: 181 NISSITGKMDRGEGSLAMLLNDKKLYDDASTAVASLKLVSGKIE--RGEGTLGKLVNDET 238
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
N+ + D+ + +E+ K++ + + L + + +
Sbjct: 239 VYNDASALIKDLREGTTDLNAGLKDVREMTAKVNRGEGTLGKLVHDETLYTELRDASKNV 298
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ I++ + + + + +
Sbjct: 299 KEIAQKINSGQGTIGKLVNEDQLYRDTTATLKKAERAMEGLGDT 342
>gi|209515075|ref|ZP_03263944.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
gi|209504701|gb|EEA04688.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
Length = 537
Score = 89.6 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/397 (8%), Positives = 89/397 (22%), Gaps = 38/397 (9%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L + V F I VG++ LD + D + T +
Sbjct: 177 LDVGTPVFFRRIQVGQVASFQLDPDGRGVTVKVFVNAPYDRFVRTDTRFWHASGV----- 231
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ I + +
Sbjct: 232 ----------------------DMTFDSTGLRLETQSIVSIIIGGIAFESPPGSQVETSA 269
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + I ++ + + + I ++ +
Sbjct: 270 DSSTAFELYTTRADAMKMHDRIVIKYVVNFTDSVRGLTVGAPVDFRGVEIGEVTAIYTRF 329
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + ++ + +D R E G + + +
Sbjct: 330 DPGTRRFSSPVEINLYPERFTSRYQNDGAGGHLTNDPRGLANYLVEHGFRFQLRSGNLLT 389
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK-F 349
+ F + S ++ + S + I + + K
Sbjct: 390 GQQYLALDYFPDAPKASIDWSKTPPEMPAIPRALQSLQDSVTRLLAKINNVPFEDIGKDA 449
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ N + + A + + + T + N + S +
Sbjct: 450 RSTLRTTNAMLGQLNTQ-VVPKASDTLSSAQTTLDSANAALQP--------DSSLQQSTE 500
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ +R+L T + ++P+ +V G+ +
Sbjct: 501 DAMRELTRTAASLRTLADYLSQHPESLVRGKSEDKKP 537
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--FLDQEYPNH-SLAKALIRPD 90
++ SV GL+ + V F G+ +G + + D S + + P+
Sbjct: 295 YVVNFTDSVRGLTVGAPVDFRGVEIGEVTAIYTRFDPGTRRFSSPVEINLYPE 347
>gi|167752888|ref|ZP_02425015.1| hypothetical protein ALIPUT_01150 [Alistipes putredinis DSM 17216]
gi|167659957|gb|EDS04087.1| hypothetical protein ALIPUT_01150 [Alistipes putredinis DSM 17216]
Length = 333
Score = 89.6 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/324 (10%), Positives = 89/324 (27%), Gaps = 4/324 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+F V ++ + I +L + + VDG+ S + G+ V
Sbjct: 3 REVKIGIFAVLMIGALWAGIRFLKGFDIFSRNAVYYAAY--DQVDGVQNASPILIRGVKV 60
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + D N + + I+ + ++ A I + + G IE++
Sbjct: 61 GAVTDISFDPSIGNEVVLQLTIQRKYRIPSNSEARIYSNSIMGAKAIEIALGDAGTYLQS 120
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
++ + F + + +I +
Sbjct: 121 GDTLCSSRSKGLMDMAGSELEFFKQKMSQVVGDLSRTMDNLNLIMEQNAANIEGTMSHLN 180
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
T N + + + V + S+ + + + + D + +
Sbjct: 181 SITGSVNGMLLSQRANLESAVANLTRFSEMLGENSPRMDSIILNLSNFTDQIQRENLAGA 240
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETT--QTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + N +V V + E + L+ + +++ +
Sbjct: 241 LDSTLMNLNAILARVNAGEGTVGQLVSDPRLYESLNEATANLASLLANLQAHPARYVHFS 300
Query: 304 IADSTSNMRSSISAIREITDQRQK 327
+ +E R+
Sbjct: 301 LFGRDPEKADRKQQKKEAKHARRD 324
>gi|120401938|ref|YP_951767.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954756|gb|ABM11761.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 343
Score = 89.6 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 80/302 (26%), Gaps = 11/302 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ +FV L + + P +V GL + VR G+ VG++
Sbjct: 12 RLAIFVCVCLLGLSLLVAVFGQLR--FEPRRGFTAEFT-NVGGLKSGDFVRIAGVEVGKV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
L L + + L +T A IR L G Y+ + E + +
Sbjct: 69 GDLSLRPD--AAVNVSFTVDDSVQLLDNTRAVIRYDNLYGDRYLAIEQGEGEGRPLAPGG 126
Query: 129 TERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + + + S + Q + I LT T A
Sbjct: 127 IIPFTQTAPALDLDTLIGGFRPLFRALDPDQVNALSSQLIQAFQGQGDTIGSVLTQTAAL 186
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
T++ A I + ++ +T + V
Sbjct: 187 TNTLADHDALIGDAITNLDTVFGTLADNNAELGQAIDTFASLTESLAERRTDISNSVAYT 246
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ +S + H+ T + +D+LL K
Sbjct: 247 NAAAGSLADLLERSRPALQKITHETDRTAGIVLDEDDYVDNLLETLPDAYKKLGRQGLYG 306
Query: 303 NI 304
+
Sbjct: 307 DW 308
>gi|54113085|gb|AAV29176.1| NT02FT0131 [synthetic construct]
Length = 241
Score = 89.6 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/235 (15%), Positives = 79/235 (33%), Gaps = 3/235 (1%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
GLFV+ ++F F ++LS D + S+ GL+ S V + G +G+
Sbjct: 9 LIAGLFVIFMVFVMIFIGFFLSG-GFKDQHTTTFVTNFK-SISGLNVGSDVSYKGFSIGK 66
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKEKKTIFQ 126
+ + +++ P I P+Y T AT+++ G+ G + + ++
Sbjct: 67 VSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAKNTSLDL 126
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
I ++ Q IT+ PS + ++ + + + S K++ + I
Sbjct: 127 IHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPENLDRFNQFTDSINI 186
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+N S + + + + +
Sbjct: 187 LLYNLSNSSIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPSTIVRGVDHKE 241
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 31/245 (12%), Positives = 83/245 (33%), Gaps = 12/245 (4%)
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS 256
I ++ V ++ + + ++ + VS F
Sbjct: 6 IKNLIAGLFVIFMVFVMIFIGFFLSGGFKDQHTTTFVTNFKSISGLNVGSDVSYKGFSIG 65
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
I+ + + + ++ +I ++ T ++ +S+
Sbjct: 66 KVSDISINKNNPKLVSVYMKINSQIPIYKQTVATLQSMGITGQSKVELSLDIDAKNTSLD 125
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
I Q +I S + +E+I + ++ + E+ K N + + + +
Sbjct: 126 LIHIKKGQIPEITSKPSQLESIMNKVSAIASSLEEISGKFNKMMSPEN-----------L 174
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F ++ IN + ++ N+ + L ++ + + QET+ ++ + E +P I
Sbjct: 175 DRFNQFTDSINILLYNLSNS-SIYFNKTLMNLNETMTESQETITRLNNVIRILEYDPSTI 233
Query: 437 VWGRE 441
V G +
Sbjct: 234 VRGVD 238
>gi|329890327|ref|ZP_08268670.1| mce related family protein [Brevundimonas diminuta ATCC 11568]
gi|328845628|gb|EGF95192.1| mce related family protein [Brevundimonas diminuta ATCC 11568]
Length = 312
Score = 89.6 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/312 (17%), Positives = 113/312 (36%), Gaps = 3/312 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME +Y +VG+ V++L WL+R Q++ I G V GLS V F
Sbjct: 1 MERDAHYAAVGIATVALLLALAVFTIWLARL-QFNKDFDVYDIVFYGPVRGLSEGGEVHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + + +A+ + TP+ ++ A + QG+ G+ YI+++ +
Sbjct: 60 NGIRVGEVTNLNLDPKKGDQVIARVRLNGTTPVRVTSRAQLEPQGITGLNYIQITAGAPD 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +I + PS I +S + + D+ I +++ + +T
Sbjct: 120 SPLLKDQYPDN-VVPVIQSQPSPIAELLSGSGTVLAQTVDALNRINRVMSDDNIRSFSTS 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + + + T +++ + + +AI
Sbjct: 179 VKNVEALTAELEARKGMFQQLEETITKANAAVGEYQALGASARQMVDTDGKQAIANINQA 238
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++S N + + +T + +++D S + + S
Sbjct: 239 TREAQAAIASINRSATGLE-GPLGEFGTQTVPQLNDTIRQLDRATRSLQSLIDNVRDSPR 297
Query: 301 LENIADSTSNMR 312
+ +
Sbjct: 298 EFIAKAPSKEIE 309
>gi|292670495|ref|ZP_06603921.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
gi|292647905|gb|EFF65877.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
Length = 426
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/311 (11%), Positives = 87/311 (27%), Gaps = 15/311 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG F + + + + ++ GL+ ++ V G+PVG
Sbjct: 4 EAKVGAFTLGGAALLIAVVVFFGGLRFSGSHDYTLYAGFGRAI-GLNPEAQVLLAGVPVG 62
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
R+ + D +I+ + ++ TI G+ G ++ ++
Sbjct: 63 RVEDIASDGTG---VTVSMVIQNGVKIPRGSSVTIAQPGIMGDKFVIITPSSATDYYGNG 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ------KIIENIEKPLTTTI 180
+ A + +N I + I+ +++ N+E
Sbjct: 120 DYLYGADEMGMDAMFTELNKMIILVQEMLTSINSIVGAPGFQTSVVQLVSNMEHMTAHLD 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVT-----PHSSDSKNTFNTITDLITSLDKMIKAID 235
T+ + A N ++ M+ ++ + + + +
Sbjct: 180 GLTATLEQMAAENRGNLQGMLAQMNTMAANLAQTTASVERIVSNLETVGADPATAENLKK 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++S T D R + + K + L+ + +
Sbjct: 240 TLANITEASGRIARIAEGIESVAGDPKTQEDARALIHNARTMTDKTNGLMGRLGNIKVTP 299
Query: 296 ETSAFLENIAD 306
+ A AD
Sbjct: 300 KVDAIYSGKAD 310
>gi|291515604|emb|CBK64814.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Alistipes shahii WAL
8301]
Length = 334
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/336 (10%), Positives = 114/336 (33%), Gaps = 5/336 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+F V+++ ++ I +L + + ++G+ S + G+ +
Sbjct: 3 REVKIGIFGVTMIIAAWAGIRFLKGFDIFSRNSVYYAAY--DQINGVQAASPIMMKGVKI 60
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + G+ D + ++ + + I+ + + A I + GL G IE++
Sbjct: 61 GTVTGISFDPQRSDNVVLQFTIKRQYHIPTDSEAKIYSNGLMGGKAIEINYGTARTYLQK 120
Query: 126 QIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+R ++ S +++F + +S + ++ +++E + ++ T++++
Sbjct: 121 GDTLRSVRERDLMDVAGSELDFFKQKVSQVTGDLSRTLTNLNRLMEANAQNISGTLSHLN 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
I+ +A + + + + T + S+ + I + +
Sbjct: 181 AITGDMAGLLDAEKRNLKAAVNDLTEFSA--MLGRNTPRVDSIVGSLNRITGELADAGFA 238
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + V + + + ++ +S + + E
Sbjct: 239 RRLTDAVDEVNGLLAKVEAGEGTVGKLMNDPALYDSLTEASANLASLLANLEQYPGRYVH 298
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ E + + ++++ I +
Sbjct: 299 FSLFGRSPEKMQEKAERKAAKAAARAERDSVKRIKN 334
>gi|121599699|ref|YP_991643.1| paraquat-inducible protein B [Burkholderia mallei SAVP1]
gi|124385932|ref|YP_001027139.1| paraquat-inducible protein B [Burkholderia mallei NCTC 10229]
gi|126448773|ref|YP_001082087.1| mce family protein [Burkholderia mallei NCTC 10247]
gi|254178884|ref|ZP_04885538.1| paraquat-inducible protein B [Burkholderia mallei ATCC 10399]
gi|254355873|ref|ZP_04972151.1| mce family protein [Burkholderia mallei 2002721280]
gi|121228509|gb|ABM51027.1| paraquat-inducible protein B [Burkholderia mallei SAVP1]
gi|124293952|gb|ABN03221.1| paraquat-inducible protein B [Burkholderia mallei NCTC 10229]
gi|126241643|gb|ABO04736.1| mce family protein [Burkholderia mallei NCTC 10247]
gi|148024848|gb|EDK83026.1| mce family protein [Burkholderia mallei 2002721280]
gi|160694798|gb|EDP84806.1| paraquat-inducible protein B [Burkholderia mallei ATCC 10399]
Length = 551
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/407 (8%), Positives = 104/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 177 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 230
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 231 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 272
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 273 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 332
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + RE
Sbjct: 333 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREASQDKG----YAARREVLSRL 388
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 389 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 448
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 449 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 506
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 507 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 546
>gi|169631641|ref|YP_001705290.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243608|emb|CAM64636.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 351
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/346 (11%), Positives = 106/346 (30%), Gaps = 6/346 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +GL V ++ + + + + + G + GL VR
Sbjct: 1 MRFRGP--LIGLSVFMVIALAMTWLVYATLRREVAGSTNDYSAMFTD-ATGLRDGDDVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + +D + + + + PLY +T ATI Q + G Y+ LS +
Sbjct: 58 AGVRVGRVESVAIDGD---LARVDFRVETEQPLYGNTIATITYQNIVGQRYLGLSMGKTG 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + G+ + + ++++++ + +
Sbjct: 115 STDRLKPGSVIPLEQTEPSFDIGMLLHGFEPLFSVLDPTQVDNLTDGVVKSLQGDTGSIV 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ S + + + + N D + + + + AI +
Sbjct: 175 GLVDQTSQLTETFAGRDKVLDDVITNLNGLTQTLAGQNKNLDSVLTHTREMVAILDNRRG 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+++++ ++ + S+ + E ++ + + +
Sbjct: 235 ALVDSVGSTAFAVRRLSNISDTVYPQLNEILHREPGFVSHLNTVEPQLAFAGANLPLLLK 294
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ IT + + I N + N +
Sbjct: 295 GVARTTQEGAFINGYVCDLNITGFFPGLNDVVPIIVNAATPGNKAQ 340
>gi|149201100|ref|ZP_01878075.1| Mammalian cell entry related protein [Roseovarius sp. TM1035]
gi|149145433|gb|EDM33459.1| Mammalian cell entry related protein [Roseovarius sp. TM1035]
Length = 672
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 51/433 (11%), Positives = 116/433 (26%), Gaps = 43/433 (9%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD------QEYPNHSL 82
S D + + ++ GLS D+ V +NG+ +G++ L + L
Sbjct: 262 SLFRGDDNEILTLAAVFEDNIAGLSVDAPVEWNGLRIGQVSALNGVVDEARFGDDRVRLL 321
Query: 83 AKALIRPDT------PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
IRP S A +R G+ S ++ +
Sbjct: 322 VSLAIRPGRLGLEGGAGRDSALAYLRESVATGLRARLASASILTGGLKVELVDVPDAPPA 381
Query: 137 ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISH 196
T G + E+ +I+D S + E I + AN +
Sbjct: 382 EIETADGGDLLFPTTES---EIADVSATATGVFERINALPIEEVMAEAITLLQNANALVS 438
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS 256
D ++ ++ + + + + +
Sbjct: 439 SADTRAVPGNVNALLDETRGVIGAPEVQALPGRLDAVLTEMETLVAQIAQEAIAAKLSTA 498
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
V + ++ ++D + S + I + + +
Sbjct: 499 LSDASAASQGVSDAVSGVPDLVARLDAVAQKAESVEIDAMVAQLTALITSADTLLAQ--- 555
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
+ + + LN + + +++++ ++ + A+ A
Sbjct: 556 ----------------EGTQALPATLNATLDEMRSVLAQLREGGVVENATAALGSARDAA 599
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGL---------NDIQNLVRKLQETVNHFDDCLN 427
TF + I L + D + +R+++
Sbjct: 600 DTFAQAGRDLPGLIAEAEAVLAQARGTLAGYAADNGVGRDARAAMREVERAARAVSSLAR 659
Query: 428 NFERNPQDIVWGR 440
ERNP ++ GR
Sbjct: 660 AIERNPNSLLLGR 672
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 34/394 (8%), Positives = 84/394 (21%), Gaps = 28/394 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L + V + GI VGRI + + + T+ +
Sbjct: 154 LVEGAPVIYRGIEVGRIGRPRITADGSSA-----EAEALIFAPHDRLINSATRFWDTSGF 208
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ +A + SG + +
Sbjct: 209 SFSLGPGGAQLDFSSVAALVSGGVTFETMISGGTSARAG-------------DNYTVYSE 255
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + LA + + + + ++
Sbjct: 256 ESAARASLFRGDDNEILTLAAVFEDNIAGLSVDAPVEWNGLRIGQVSALNGVVDEARFGD 315
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ L I + S L +
Sbjct: 316 DRVRLLVSLAIRPGRLGLEGGAGRDSALAYLRESVATGLRARLASASILTGGLKVELVDV 375
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + D S A T IE + + Q
Sbjct: 376 PDAPPAEIETADGGDLLFPTTESEIADVSATATGVFERINALPIEEVMAEAITLLQNANA 435
Query: 352 LMSKINNISALKENNSLFKDAQRAM--HTFRDTSEKINRYIPSIGNNLQNFS-------- 401
L+S + + N+L + + + + +++ + + + +
Sbjct: 436 LVSSADTRAVPGNVNALLDETRGVIGAPEVQALPGRLDAVLTEMETLVAQIAQEAIAAKL 495
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ L+D + + + V+ D + + Q
Sbjct: 496 STALSDASAASQGVSDAVSGVPDLVARLDAVAQK 529
Score = 44.9 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/393 (5%), Positives = 83/393 (21%), Gaps = 14/393 (3%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS-SVRFNGIPVGRIVGLFLDQEYP 78
+ + + Y + I + G+ + +R+ + VG + +
Sbjct: 7 LAALLVVLIVAWQAYSERGPLIEIAF-ENASGVRAGATELRYRDVTVGMVEDVSFAP-GL 64
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ L K + + Y A + + + A +T
Sbjct: 65 DLVLVKVRVDQEVAPYIDRDAQFWVVRPQVTARGVTGLGTVLSGVYIEGLWDNSPGAAVT 124
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
+ + ++ ++ ++E + A+ S
Sbjct: 125 QIAGLPDAPLERVGQDGLRLMLRAQGRASLVEGAPVIYRGIEVGRIGRPRITADGSSAEA 184
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ + + + + T + +
Sbjct: 185 EALIFAPH-----------DRLINSATRFWDTSGFSFSLGPGGAQLDFSSVAALVSGGVT 233
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
V + + ++ + + +
Sbjct: 234 FETMISGGTSARAGDNYTVYSEESAARASLFRGDDNEILTLAAVFEDNIAGLSVDAPVEW 293
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
+ + ++ + + A ++ +++L +
Sbjct: 294 NGLRIGQVSALNGVVDEARFGDDRVRLLVSLAIRPGRLGLEGGAGRDSALAYLRESVATG 353
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
R + + L + + +I+
Sbjct: 354 LRARLASASILTGGLKVELVDVPDAPPAEIETA 386
>gi|53726178|ref|YP_103934.1| paraquat-inducible protein B [Burkholderia mallei ATCC 23344]
gi|251767197|ref|ZP_02266344.2| mce family protein [Burkholderia mallei PRL-20]
gi|254202649|ref|ZP_04909012.1| mce family protein [Burkholderia mallei FMH]
gi|254207988|ref|ZP_04914338.1| mce family protein [Burkholderia mallei JHU]
gi|52429601|gb|AAU50194.1| paraquat-inducible protein B [Burkholderia mallei ATCC 23344]
gi|147746896|gb|EDK53973.1| mce family protein [Burkholderia mallei FMH]
gi|147751882|gb|EDK58949.1| mce family protein [Burkholderia mallei JHU]
gi|243063586|gb|EES45772.1| mce family protein [Burkholderia mallei PRL-20]
Length = 553
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/407 (8%), Positives = 104/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 179 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 232
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 233 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 274
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 275 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 334
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + RE
Sbjct: 335 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREASQDKG----YAARREVLSRL 390
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 391 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 450
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 451 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 508
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 509 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 548
>gi|71906847|ref|YP_284434.1| hypothetical protein Daro_1208 [Dechloromonas aromatica RCB]
gi|71846468|gb|AAZ45964.1| Mammalian cell entry related protein [Dechloromonas aromatica RCB]
Length = 308
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 62/151 (41%), Gaps = 6/151 (3%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
YWLS S I+ ++ GL+ + VR+ GI VG++ + LD + ++ L
Sbjct: 26 YWLSGSRDASRD---YIVVTKQNIGGLNPQAQVRYRGIRVGKVSDIRLDPDDYSNILVTI 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ D PL T A + QG+ G+ +I L K+ + + ++ IT PS ++
Sbjct: 83 SVNEDVPLTTGTVAKLNYQGVTGLAHILLLETGKDMAPLE---PDGDKLPRITMIPSLLD 139
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPL 176
T K+ ++ +
Sbjct: 140 ELGETGAATLKQARQMMASANALLSEENRTH 170
Score = 40.3 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 46/136 (33%), Gaps = 7/136 (5%)
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
+ + R + +T+ +E + ++ + + + ++ + + L + A
Sbjct: 159 ANALLSEENRTHLTATLANLEAASGSMKPALENLNATLVQMRKLLDDRNVKQLSQAAGEV 218
Query: 376 ---MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL----QETVNHFDDCLNN 428
+ R K+ + + + S G + + + +L T L
Sbjct: 219 GPLLSDTRILIGKMQVATDKLDVAIGDASAGGTSALMPRLNELAVDFSMTSRQLSRVLRI 278
Query: 429 FERNPQDIVWGREKGS 444
E PQ +V+G S
Sbjct: 279 LEDTPQGLVFGAPAQS 294
>gi|67642336|ref|ZP_00441094.1| paraquat-inducible protein B [Burkholderia mallei GB8 horse 4]
gi|238523472|gb|EEP86910.1| paraquat-inducible protein B [Burkholderia mallei GB8 horse 4]
Length = 522
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/407 (8%), Positives = 104/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 148 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 201
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 202 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 243
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 244 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 303
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + RE
Sbjct: 304 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREASQDKG----YAARREVLSRL 359
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 360 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 419
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 420 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 477
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 478 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 517
>gi|303327435|ref|ZP_07357876.1| paraquat-inducible protein B [Desulfovibrio sp. 3_1_syn3]
gi|302862375|gb|EFL85308.1| paraquat-inducible protein B [Desulfovibrio sp. 3_1_syn3]
Length = 321
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/314 (11%), Positives = 89/314 (28%), Gaps = 5/314 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ Y T VG FV+ + + L+ N+ E ++ GSV GLS + V F
Sbjct: 1 MTSQAYKTMVGAFVLGGIGLFALGLVLLAG-NRLFSNDLEYVLYFDGSVSGLSIGAPVVF 59
Query: 61 NGIPVGRIVGLFL---DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+P+G + + L ++ I + + I I +
Sbjct: 60 RGVPMGSVTQISLVANSRDSNVTIPVHIRIDEKSIVRAGGR-GISEAFQQEIVRRMVQRG 118
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + T + + + + N+ S + I +Q+ + +
Sbjct: 119 LRARLQLQSLITGQYRIELDFHPDTPANFRSSTPDLEIPTIPSPIDTLQRTLAKLPLEQM 178
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ A + + + + T + + + + S + I
Sbjct: 179 VHSLDSILEDLAQALADGKLKEGIASFAGTFAEAQRMLKDSPLRNAADSALQQIDGAARA 238
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++ + + ++ L +
Sbjct: 239 VRQELPGALVAFREAMTNMAQAAEQLRRVSGSAQDVLGRDSPAMNDLRRLLKESTAAARA 298
Query: 298 SAFLENIADSTSNM 311
L ++ +
Sbjct: 299 LRDLADLLERNPEA 312
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 52/192 (27%), Gaps = 7/192 (3%)
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ ID L + + + + D
Sbjct: 132 QYRIELDFHPDTPANFRSSTPDLEIPTIPSPIDTLQRTLAKLPLEQMVHSLDSILEDLAQ 191
Query: 310 NMRSSI-SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + + + + + Q+ + E
Sbjct: 192 ALADGKLKEGIASFAGTFAEAQRMLKDSPLRNAADSALQQIDGAARAVRQ-----ELPGA 246
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ AM +E++ R S + L S + +ND++ L+++ D +
Sbjct: 247 LVAFREAMTNMAQAAEQLRRVSGSAQDVLGRDSPA-MNDLRRLLKESTAAARALRDLADL 305
Query: 429 FERNPQDIVWGR 440
ERNP+ ++ GR
Sbjct: 306 LERNPEALLKGR 317
>gi|319945412|ref|ZP_08019672.1| tolerance efflux ABC superfamily ATP binding cassette transporter,
binding protein [Lautropia mirabilis ATCC 51599]
gi|319741198|gb|EFV93625.1| tolerance efflux ABC superfamily ATP binding cassette transporter,
binding protein [Lautropia mirabilis ATCC 51599]
Length = 156
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 1/126 (0%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VG FV++ + F S N + + ++ GL ++VR G+ VGR
Sbjct: 3 ALVGCFVLAGILALVFLAVRASDPNSTNIRGGYELEANFDNIGGLKAKAAVRSAGVVVGR 62
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + LD + + + P ++ I T GL G Y+ + ++
Sbjct: 63 VTDITLDPQTY-QAKVILRMDPRYHFPKDSSLKIMTAGLLGEQYLGMEPGADTEELEDGG 121
Query: 128 ATERNQ 133
E Q
Sbjct: 122 KIEMTQ 127
>gi|49072911|gb|AAT51762.1| TrnC2 [Mycobacterium vanbaalenii PYR-1]
Length = 342
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 7/136 (5%)
Query: 1 MESKNYYTS--VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K +G+FVV +F I ++ + +V GL++ V
Sbjct: 1 MTNKMSAVLWRLGIFVVVCALGAFALIAVFAQLRFEREQRYTAVFA---NVSGLTSGDFV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ L + + L + A I+ L G Y+ +
Sbjct: 58 RIAGVEVGKVR--TLTVRDDSTVAVEFGADDSVVLTDGSRAVIKYDNLIGDRYLAIEEGA 115
Query: 119 KEKKTIFQIATERNQR 134
+ R
Sbjct: 116 GGTTKLRPGDAIPLDR 131
>gi|290968736|ref|ZP_06560274.1| virulence factor Mce family protein [Megasphaera genomosp. type_1
str. 28L]
gi|290781389|gb|EFD93979.1| virulence factor Mce family protein [Megasphaera genomosp. type_1
str. 28L]
Length = 411
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/357 (12%), Positives = 98/357 (27%), Gaps = 11/357 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGL + + + I L+++ + P EV + +GL + VR+ G+ VG
Sbjct: 6 EAKVGLVTIVGVLVFSYVIIDLAQAEIFGKPGYEVQA-LVADANGLQKGNVVRYAGVNVG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
R+ + E + + + + +I T GL G + + R +
Sbjct: 65 RVEKVVPTAEG---VRVTLKLNNEVKIPKDSQISITTDGLMGEKIVSIKAGRDTTHYLQS 121
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
A A + S + + + + +
Sbjct: 122 GDRVAGMPAKTMA-----DMMDSAGSLMNNANTMVENINAIVGDARTQQAVRGSLQHING 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T + + + ++ + ++ L + + QI
Sbjct: 177 ITAQTDALLQQNSGNIRQITQNMAALTGQMNVSLQRLDGDGATSENVRSVVRNMQITSAK 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + S T D++ T + + QK++ LLS + + E
Sbjct: 237 LAVVADSLASVSGDAQTQSDIKTTLKNTAAISQKVNQLLSGNNDVQTTGEAGILYNTSKK 296
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
T + I ++ I + IN +
Sbjct: 297 ETYGYANFI--VKRNKKFILLGSEGIGNRTRMNLQYGTDGNLMDARWGLINGELGIG 351
>gi|329957671|ref|ZP_08298146.1| hypothetical protein HMPREF9445_03028 [Bacteroides clarus YIT
12056]
gi|328522548|gb|EGF49657.1| hypothetical protein HMPREF9445_03028 [Bacteroides clarus YIT
12056]
Length = 297
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 95/290 (32%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ ++ L + I +L N + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIAALCILVYGINYLKGINMFKPSSYFYVK--FHNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D P +A+ + D + +TA + + L G+ L
Sbjct: 59 DGFRVGIVRDLYYDYTQPGKVIAEIDVNTDLRIPKGSTAELAAEMLGGVKMNLLLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + + + + E K+ + + + P
Sbjct: 119 EKYQIGDTIPGTLNNGMMEKVASM---MPQLEKMLPKLDSILGSLNTV---LADPAIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T S + + + + + + +L ++ A +Q ++
Sbjct: 173 LHNVQNLTANLAVTSGQLQTLMNKDIPQLTGKLNTIGDNFVLISNNLKEIDYATAMQSID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ ++ + + V ++D LL D S
Sbjct: 233 STLANVKMITDKLNRKDNTVGLLLNDPS-LYNNLNATTANAASLLEDLKS 281
>gi|303256525|ref|ZP_07342539.1| mce family protein [Burkholderiales bacterium 1_1_47]
gi|331000623|ref|ZP_08324281.1| hypothetical protein HMPREF9439_01929 [Parasutterella
excrementihominis YIT 11859]
gi|302860016|gb|EFL83093.1| mce family protein [Burkholderiales bacterium 1_1_47]
gi|329571185|gb|EGG52890.1| hypothetical protein HMPREF9439_01929 [Parasutterella
excrementihominis YIT 11859]
Length = 160
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 49/132 (37%), Gaps = 3/132 (2%)
Query: 1 MESKNYYT--SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+++N VGLFV+ + F + + + + ++ GL + V
Sbjct: 1 MQNQNTKINFLVGLFVLGGIVALLFLALQAANLSSFSTSKGYEVTAYFDNIGGLKARAPV 60
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VGR+ + D + + + T+A I T GL G YI L
Sbjct: 61 RSAGVLVGRVKSISYDNDTF-QAKVVISMENQFKFPADTSAKILTAGLIGEQYIGLQPGA 119
Query: 119 KEKKTIFQIATE 130
+K E
Sbjct: 120 DDKDLTNGGRIE 131
>gi|296122314|ref|YP_003630092.1| hypothetical protein Plim_2066 [Planctomyces limnophilus DSM 3776]
gi|296014654|gb|ADG67893.1| Mammalian cell entry related domain protein [Planctomyces
limnophilus DSM 3776]
Length = 388
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/372 (12%), Positives = 102/372 (27%), Gaps = 11/372 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG+ V+ + + + + Y + I+ S G+ + VR
Sbjct: 1 MSERQLQFRVGMMVLVAMAIGVGLLVRAGKLDSYWDEDFSIAIQF-ESAGGIYPSAPVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + LD + A I L +TA + L
Sbjct: 60 YGLTIGNVRDVRLD-NKRRGVIVIAEIDAKHKLPIDSTAQVAVSLLGEG--HLEIIPGLS 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + A Q A + A S + + + +
Sbjct: 117 EEPLKHGAVISGQAAGDPMALVARLEAKTTATMDSFAATSKE------WGTLAHNVNNLL 170
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + + + + VN
Sbjct: 171 ETKRGNIDQVIERAADSLDQLSLAMKSATELIQQANRIVGDPKTQAALQQTAQSLPRLVN 230
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
E I V+ + N + ++ ++D L++ +
Sbjct: 231 DTRETIVVARTTLESMQQNLKNLESVTDPLAKKGNDMIVRLDTSLANLDRLLADASRFVR 290
Query: 301 LENIAD-STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
N D + + + + Q + + IE I ++ + S K A +
Sbjct: 291 TLNTQDGTLQKLAADPQLYDNLNRSAQLVTVLLRGIEPIVQDMREFSDKVARRPEILGVG 350
Query: 360 SALKENNSLFKD 371
A++ +N L
Sbjct: 351 GAIQPSNGLRDT 362
>gi|330815312|ref|YP_004359017.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia gladioli BSR3]
gi|327367705|gb|AEA59061.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia gladioli BSR3]
Length = 168
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 47/123 (38%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VGLFVV F + + P V ++ ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYPVKMKF-DNIGGLKPRAAVK 61
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + D ++ + P ++A I T GL G YI L
Sbjct: 62 SAGVVVGRVGSIGFDTNTY-QAVVTVDLDKQYPFPKDSSAKILTSGLLGEQYIGLEPGGD 120
Query: 120 EKK 122
+
Sbjct: 121 TEM 123
>gi|282880760|ref|ZP_06289456.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
gi|281305294|gb|EFA97358.1| conserved hypothetical protein [Prevotella timonensis CRIS 5C-B1]
Length = 300
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/293 (14%), Positives = 93/293 (31%), Gaps = 6/293 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + L V+ L FF + +L SN + + GL+ S +
Sbjct: 1 MRNHIQEIKIALVAVAGLVALFFGMKFLKGSNLLSSSDTYYFV--FNDISGLTESSPIFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G VGRI ++ D + A + + +TA+I + L I +
Sbjct: 59 AGYQVGRIKKIYFDYSHAEEIKVLAEVDRKMKIPVGSTASISSDVLGNIKVTLNIAPHRG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + K+ H+ ++ + +
Sbjct: 119 QYVQPGGVISGSIDTGTVGK---MTEMVPTIKQILPKLDSVMFHLNALLADPALAHSIHN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T + ++ HI +V S + +L K+ A + KV+
Sbjct: 176 IDEITNNLSTSSKQLHILLSNVNREVPGIVSKTNLVLTNTEQFTDNLRKIDVASTMTKVD 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + ++Q + +S + D + + ID L + + K
Sbjct: 236 EAMADVQEITAKMNNNSGTFGLLLKDP-TLYYNLNQTMKNIDSLAVNLRQQPK 287
>gi|254821391|ref|ZP_05226392.1| hypothetical protein MintA_15749 [Mycobacterium intracellulare ATCC
13950]
Length = 516
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 84/272 (30%), Gaps = 4/272 (1%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ +++++ +Y+L + + +P S GL ++V + GI +G++
Sbjct: 10 LIAFGILTVISLLVLGVYYLQIPSLMGIGRYTLKAELPAS-GGLYPTANVTYRGITIGKV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + A I + A + + G Y++L + K +
Sbjct: 69 TDVEP---TERGAEATMSIDSHYKIPADAIANVHSVSAVGEQYLDLVSSGNPGKYLADGQ 125
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
T P+ A +KI + + + L + + + I
Sbjct: 126 TITKGTVPAEIGPALDTANRGLAVLPKEKIGQLLDETAQSVGGLGPALQRLVDSTQAIVG 185
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
I+ ++ ++ + S + A Q++ +L
Sbjct: 186 DFKTQITDVNDIIENSGPVLDSQVKSRDNIERWARNLNRLAAQSAQQDQRLKSLLHQAAP 245
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+++ V ++ + ++ ++
Sbjct: 246 TADQVNDLFSGVRESLPQTLANLEVVFDLLKR 277
>gi|238899005|ref|YP_002924687.1| putative organic solvent ABC transporter, cytoplasmic membrane
protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466765|gb|ACQ68539.1| putative organic solvent ABC transporter, cytoplasmic membrane
protein [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 169
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K Y VGL ++S + F ++ + I ++ GL S V+
Sbjct: 1 MHTKKYEVWVGLLMLSGISAILFLCLKIANIHLITPQSTYEIYANFDNIGGLKMHSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + L I + +++ IRT GL G ++ L+ +
Sbjct: 61 GGVVIGKVSDISLKGPNYTP-RVTIDIDSQYHHIPDTSSLAIRTAGLLGEQFLALNLGFE 119
>gi|323140907|ref|ZP_08075820.1| putative virulence factor Mce family protein [Phascolarctobacterium
sp. YIT 12067]
gi|322414645|gb|EFY05451.1| putative virulence factor Mce family protein [Phascolarctobacterium
sp. YIT 12067]
Length = 422
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 91/311 (29%), Gaps = 15/311 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VG F + I ++ + + E+ I P V GL VR+ G+
Sbjct: 3 SSEVKVGAFALGGAVVLAGIITFMGAFS-FGKKGYELRINYPQ-VSGLMPGHVVRYAGVQ 60
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY----IELSTLRKE 120
VG + + + + I D + T TI + G+ G +
Sbjct: 61 VGTVKKINVAHD---KVEVITEINDDIKIPQGATFTISSDGIMGEKFVSVIPPAKQGNGY 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I SG + + + +Q+ +++ K +
Sbjct: 118 VAEGSTINGVPGGGMDEFFASSGDLVKRMENIANAFENVFGDKEVQQAMKSGFKNMNDIA 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N+ T + V+A+ + + + + + Q V
Sbjct: 178 ENMNTFTKVMADVAVANQQDITSMIHQINELSQRMNGTAAHIESIMAGVDNNGKTGQNVA 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDV------RETTQTFQEVGQKIDHLLSDFSSKMKS 294
I +N+ +S + + D +ET +E ++ + +L + S
Sbjct: 238 AIAQNMADTSQRMENIVEVLETVAKDPVTQKSLKETLVNVKETSERANRILGTITEAKVS 297
Query: 295 KETSAFLENIA 305
+ +
Sbjct: 298 TDAGFAAKGGD 308
>gi|160889314|ref|ZP_02070317.1| hypothetical protein BACUNI_01737 [Bacteroides uniformis ATCC 8492]
gi|270295910|ref|ZP_06202110.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|317479650|ref|ZP_07938775.1| hypothetical protein HMPREF1007_01891 [Bacteroides sp. 4_1_36]
gi|156861321|gb|EDO54752.1| hypothetical protein BACUNI_01737 [Bacteroides uniformis ATCC 8492]
gi|270273314|gb|EFA19176.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|316904215|gb|EFV26044.1| hypothetical protein HMPREF1007_01891 [Bacteroides sp. 4_1_36]
Length = 297
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 87/287 (30%), Gaps = 9/287 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ ++ L + I +L N + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIAALCILVYGINYLKGINMFKPSSYFYVK--FQNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D P +A+ + P+ + +TA + + L G+ L
Sbjct: 59 DGFRVGIVRDLYYDYTQPGKVVAEIDVDPELRIPKGSTAELAAEMLGGVKMNLLLANNPR 118
Query: 121 KKTIFQIATER-------NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+K + A + + + + + I + +
Sbjct: 119 EKYQIGDTIPGVLNNGMMEKVATMMPQVEKMLPKLDSILASLNVILADPAIPATLHNVQD 178
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + + + + + + K+ S++ + + +
Sbjct: 179 LTASMAVTSRQLQTLMKDDIPQLTGKLNTIGDNFALISNNLKEIDYAAAMQKVDATLNNV 238
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ +N N + + T + + + ++
Sbjct: 239 KMITDKLNQKDNTVGLLLNDPSLYNNLNATTANAASLLEDLKSHPKR 285
>gi|224027039|ref|ZP_03645405.1| hypothetical protein BACCOPRO_03798 [Bacteroides coprophilus DSM
18228]
gi|224020275|gb|EEF78273.1| hypothetical protein BACCOPRO_03798 [Bacteroides coprophilus DSM
18228]
Length = 295
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/284 (13%), Positives = 91/284 (32%), Gaps = 8/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL ++ L FF I +L N + + +++GL+T S V NG+ VG
Sbjct: 4 EVKIGLAGIASLLILFFGINYLKGVNMFKPESYYYV--EFTNINGLATSSPVFANGLKVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + + P H + + + + A + T+ L + L ++
Sbjct: 62 LVRDIQYNYQKPGHVVVGIEMDQAMRIPKGSRAELVTEMLGTVKMNMLLNHEGQEYY--- 118
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ ++ + + + + P +
Sbjct: 119 --NPGDTLVGEANEGIMGAAEKDLLPKLTQMMPKMDSILSSLNTLLADPALAKTLHNAEQ 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T N S + + + + + + + +L + A K++ L+N+
Sbjct: 177 LTASLNATSRQLHTLMSNDIPQLTGNVTAITEDLKVISGNLKNVNYAATFTKIDSTLQNV 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
++ ++ + + + ++D E LL D
Sbjct: 237 RLLTDKLNRKDNSLGLLLNDP-ELYNNLNATSANAASLLKDLQE 279
>gi|169631110|ref|YP_001704759.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243077|emb|CAM64105.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 337
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 59/169 (34%), Gaps = 5/169 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + GL + + I + +GP+ GL + VR
Sbjct: 1 MK-RIVFLMAGLTAIVAVAVVLTLIIVNALRTPVNGPVRHYDALFTD-ASGLIVGNDVRI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ + LD + + + D PLY +TT IR Q L G Y+E++
Sbjct: 59 SGVQVGKVEKIHLDGKN---ARITFNVLTDHPLYQNTTVAIRYQSLVGQRYVEIAQAPTP 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ T + + + + + T + +
Sbjct: 116 SAPLAAGTTIPLGQTIPSFDIAKLFNGFRPIFETLDPAQFNRLTENILQ 164
>gi|167764846|ref|ZP_02436967.1| hypothetical protein BACSTE_03238 [Bacteroides stercoris ATCC
43183]
gi|167697515|gb|EDS14094.1| hypothetical protein BACSTE_03238 [Bacteroides stercoris ATCC
43183]
Length = 297
Score = 89.2 bits (218), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/290 (14%), Positives = 96/290 (33%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ ++ L + I +L + + + +V+GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIAALCILVYGINYLKGIHMFKPSSYFYVK--FHNVNGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D P +A+ + D + +TA + T+ L G+ L
Sbjct: 59 DGFRVGIVRDLYYDYTQPGKVVAEIDVNTDLRIPKGSTAELATEMLGGVKMNLLLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + + + + E K+ + + + P
Sbjct: 119 EKYQVGDTIPGTLNNGMMEKVATM---MPQLEKMLPKLDSILGSLNTV---LADPAIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T S + + + + + + +L ++ A +Q ++
Sbjct: 173 LHNVQNLTANLAVTSGQLQTLMNKDIPQLTGKLNTIGDNFVLISNNLKEIDYATAMQSID 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ ++ + + V ++D LL D S
Sbjct: 233 STLANVKMLTDKLNRKDNTVGLLLNDPS-LYNNLNATTANAASLLEDLKS 281
>gi|83949687|ref|ZP_00958420.1| hypothetical protein ISM_01295 [Roseovarius nubinhibens ISM]
gi|83837586|gb|EAP76882.1| hypothetical protein ISM_01295 [Roseovarius nubinhibens ISM]
Length = 151
Score = 88.8 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 3/130 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +VG V++ L+ + S DG+ + VR
Sbjct: 1 MSENKTEVAVGGIVLAAAVGFLVYAGQLTGFAST-SQGYPLHASF-RSADGVDLGTDVRM 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ L LD E + A ++ L + +I ++GL G ++E+
Sbjct: 59 AGVKVGRVTELTLDPETFR-ARATFTVQEGIELPDDSAVSIASEGLLGGNFVEILPGGSP 117
Query: 121 KKTIFQIATE 130
E
Sbjct: 118 FAFEPGDTVE 127
>gi|254773614|ref|ZP_05215130.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 350
Score = 88.8 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 88/286 (30%), Gaps = 6/286 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ V +F ++L S + V L VR G+
Sbjct: 10 RSMVIKVSIFAAAMLLVSAGLVVVFGDFRFGPESTYHATFV---DVSRLKAGQKVRIAGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + + L+++ + LY ST A IR + L G ++E+++ E +
Sbjct: 67 PVGAVEAVKLNRDNT--IDVTFGVDKRYTLYSSTRAVIRYENLVGDRHLEITSGPGELRK 124
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ T +Q + + + +I+ ++ +
Sbjct: 125 LPAGGTINSQHTQPALDLDALLGGLRPVLKGL-DADKVNTISSAVIQLLQGQGGALSNVL 183
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S + + + + + + + + + I
Sbjct: 184 ADTSAFTSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSASVDQLQQLITGLAKHKDDIA 243
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I ++ ++ + N+ ++ + + + ++D+ ++ +
Sbjct: 244 GAIPPLASTTTDLTELLQNSRRPLQGVLENTRPLATELDNRKAEVN 289
>gi|298527562|ref|ZP_07014971.1| MCE-family protein [Mycobacterium tuberculosis 94_M4241A]
gi|298497356|gb|EFI32650.1| MCE-family protein [Mycobacterium tuberculosis 94_M4241A]
Length = 197
Score = 88.8 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 62/187 (33%), Gaps = 4/187 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ V +LFF+ I + +V GL VR
Sbjct: 1 MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAE---FSNVSGLRQGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G++ L L + + I PLY STTA IR L G Y+EL +R
Sbjct: 58 SGVEIGKVKALHLV-DGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRVRAR 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ +T SG A + + +H Q+ +
Sbjct: 117 GQRSAAARWTHPIVPHVTGLGSGRVDRWFQAGVSGVGSREGEQHRQRAHHRLPGARWHHK 176
Query: 181 ANIETIS 187
+
Sbjct: 177 RHPRPDR 183
>gi|15609104|ref|NP_216483.1| MCE-family protein MCE3B [Mycobacterium tuberculosis H37Rv]
gi|15841442|ref|NP_336479.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|148661776|ref|YP_001283299.1| MCE-family protein Mce3B [Mycobacterium tuberculosis H37Ra]
gi|148823181|ref|YP_001287935.1| MCE-family protein mce3B [Mycobacterium tuberculosis F11]
gi|167970511|ref|ZP_02552788.1| MCE-family protein mce3B [Mycobacterium tuberculosis H37Ra]
gi|215404239|ref|ZP_03416420.1| MCE-family protein mce3B [Mycobacterium tuberculosis 02_1987]
gi|215411649|ref|ZP_03420445.1| MCE-family protein mce3B [Mycobacterium tuberculosis 94_M4241A]
gi|215430877|ref|ZP_03428796.1| MCE-family protein mce3B [Mycobacterium tuberculosis EAS054]
gi|218753679|ref|ZP_03532475.1| MCE-family protein mce3B [Mycobacterium tuberculosis GM 1503]
gi|219557921|ref|ZP_03536997.1| MCE-family protein mce3B [Mycobacterium tuberculosis T17]
gi|254232137|ref|ZP_04925464.1| MCE-family protein mce3B [Mycobacterium tuberculosis C]
gi|254364786|ref|ZP_04980832.1| MCE-family protein mce3B [Mycobacterium tuberculosis str. Haarlem]
gi|254550987|ref|ZP_05141434.1| MCE-family protein mce3B [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186938|ref|ZP_05764412.1| MCE-family protein mce3B [Mycobacterium tuberculosis CPHL_A]
gi|260201060|ref|ZP_05768551.1| MCE-family protein mce3B [Mycobacterium tuberculosis T46]
gi|289443451|ref|ZP_06433195.1| MCE-family protein mce3B [Mycobacterium tuberculosis T46]
gi|289447584|ref|ZP_06437328.1| MCE-family protein mce3B [Mycobacterium tuberculosis CPHL_A]
gi|289570057|ref|ZP_06450284.1| MCE-family protein mce3B [Mycobacterium tuberculosis T17]
gi|289746094|ref|ZP_06505472.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289754064|ref|ZP_06513442.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289762122|ref|ZP_06521500.1| MCE-family protein mce3B [Mycobacterium tuberculosis GM 1503]
gi|294996889|ref|ZP_06802580.1| MCE-family protein mce3B [Mycobacterium tuberculosis 210]
gi|298525461|ref|ZP_07012870.1| MCE-family protein Mce3B [Mycobacterium tuberculosis 94_M4241A]
gi|306776199|ref|ZP_07414536.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu001]
gi|306779980|ref|ZP_07418317.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu002]
gi|306784730|ref|ZP_07423052.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu003]
gi|306789087|ref|ZP_07427409.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu004]
gi|306793422|ref|ZP_07431724.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu005]
gi|306797805|ref|ZP_07436107.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu006]
gi|306803686|ref|ZP_07440354.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu008]
gi|306808260|ref|ZP_07444928.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu007]
gi|306968083|ref|ZP_07480744.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu009]
gi|306972308|ref|ZP_07484969.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu010]
gi|307080019|ref|ZP_07489189.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu011]
gi|307084593|ref|ZP_07493706.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu012]
gi|2950437|emb|CAA17840.1| MCE-FAMILY PROTEIN MCE3B [Mycobacterium tuberculosis H37Rv]
gi|13881681|gb|AAK46293.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|124601196|gb|EAY60206.1| MCE-family protein mce3B [Mycobacterium tuberculosis C]
gi|134150300|gb|EBA42345.1| MCE-family protein mce3B [Mycobacterium tuberculosis str. Haarlem]
gi|148505928|gb|ABQ73737.1| MCE-family protein Mce3B [Mycobacterium tuberculosis H37Ra]
gi|148721708|gb|ABR06333.1| MCE-family protein mce3B [Mycobacterium tuberculosis F11]
gi|289416370|gb|EFD13610.1| MCE-family protein mce3B [Mycobacterium tuberculosis T46]
gi|289420542|gb|EFD17743.1| MCE-family protein mce3B [Mycobacterium tuberculosis CPHL_A]
gi|289543811|gb|EFD47459.1| MCE-family protein mce3B [Mycobacterium tuberculosis T17]
gi|289686622|gb|EFD54110.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289694651|gb|EFD62080.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289709628|gb|EFD73644.1| MCE-family protein mce3B [Mycobacterium tuberculosis GM 1503]
gi|298495255|gb|EFI30549.1| MCE-family protein Mce3B [Mycobacterium tuberculosis 94_M4241A]
gi|308215379|gb|EFO74778.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu001]
gi|308327134|gb|EFP15985.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu002]
gi|308330570|gb|EFP19421.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu003]
gi|308334404|gb|EFP23255.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu004]
gi|308338200|gb|EFP27051.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu005]
gi|308341895|gb|EFP30746.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu006]
gi|308345384|gb|EFP34235.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu007]
gi|308349687|gb|EFP38538.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu008]
gi|308354317|gb|EFP43168.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu009]
gi|308358259|gb|EFP47110.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu010]
gi|308362187|gb|EFP51038.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu011]
gi|308365844|gb|EFP54695.1| MCE-family protein mce3B [Mycobacterium tuberculosis SUMu012]
gi|323719532|gb|EGB28658.1| MCE-family protein mce3B [Mycobacterium tuberculosis CDC1551A]
Length = 342
Score = 88.8 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 11/303 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G+F+ L +F I DG +V L T VR G+ VG+
Sbjct: 10 VRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFA---NVSNLRTGKLVRIAGVEVGK 66
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + ++ + + L T A IR L G Y+ L +
Sbjct: 67 VTRISINPD--ATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPG 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT------TTIA 181
T R + ++ Q + + T + A
Sbjct: 125 HTIPLARTQPALDLDALIGGFKPLFRALNPEQVNALSEQLLHAFAGQGPTIGSLLAQSAA 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T++ I + +D + T + K V
Sbjct: 185 VTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISNAVAY 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
++ ++ + V + +D+LL+ K ++
Sbjct: 245 TNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMY 304
Query: 302 ENI 304
+
Sbjct: 305 GDF 307
>gi|325300725|ref|YP_004260642.1| Mammalian cell entry related domain-containing protein [Bacteroides
salanitronis DSM 18170]
gi|324320278|gb|ADY38169.1| Mammalian cell entry related domain protein [Bacteroides
salanitronis DSM 18170]
Length = 295
Score = 88.8 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/284 (14%), Positives = 92/284 (32%), Gaps = 8/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL ++ L F I++L N + ++ +V+GL S V NG VG
Sbjct: 4 EFKIGLAGIAALIILFCGIHYLKGINMFKPESYYLV--EFENVNGLPESSPVFANGFKVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ L + + P H L + + + A + T+ L + L L+ +
Sbjct: 62 IVRDLRYNYQKPGHVLVGIELDQHMKVPKGSRAELVTEMLGTVKMNLLLNLQNMEYY--- 118
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
E + + + + + + + + P +
Sbjct: 119 --GENDTIPGVANNGIMGAAEKDLLPQIQRMLPKMDSILGSLNKLLADPSLANTLHNAEQ 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T N + T V + T + + + +L + A + KV+ L N+
Sbjct: 177 LTASLNATGRQLNKLMDTDVPQLLDNVNATVSNLQVISNNLKDVDYASTIAKVDSTLANV 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ ++ + + + ++D + LL D +
Sbjct: 237 HLLTDKLNRKDNTLGLLMND-SSLYKNLNATSANAASLLEDLKA 279
>gi|183982888|ref|YP_001851179.1| MCE-family protein Mce3C [Mycobacterium marinum M]
gi|183176214|gb|ACC41324.1| MCE-family protein Mce3C [Mycobacterium marinum M]
Length = 427
Score = 88.8 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/307 (13%), Positives = 99/307 (32%), Gaps = 19/307 (6%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+S VG + + +D + + V GL T ++V
Sbjct: 1 MKSFAERNLLLVGTVGILTAAGVVGGALQYQKLPFFDQGTS--VCAYFADVGGLRTGNTV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+G PVG++ + LD+ + + + L T A I+T+GL G ++E+
Sbjct: 59 EVSGYPVGKVSSIELDEPG---ARVTFKVDKNIRLGERTEAAIKTKGLLGSKFVEV---- 111
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
I + + T S + + S ++ + + ++ + +
Sbjct: 112 -----IPRGEGHLTGPIPVERTMSPYQLPDALGDLASTISGLNTGQLSESLDTLAQTFAD 166
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T A+ +A +++ + ++ + L +
Sbjct: 167 TPADFRNAVQGVARLARTLNQRDVQLRSLLDNAARATGVLANRTDQIAGLVRDTNALLVQ 226
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + N + Q+ + D R+ + K++ +L ++ + + +
Sbjct: 227 LRTQSAALDQIWANISAVARQLKGFIADNRQ---ELRPALDKLNGVLDIVEARKERLQQA 283
Query: 299 AFLENIA 305
L N
Sbjct: 284 IPLINTY 290
>gi|162452754|ref|YP_001615121.1| putative ABC transport system substrate-binding protein [Sorangium
cellulosum 'So ce 56']
gi|161163336|emb|CAN94641.1| putative ABC transport system substrate-binding protein [Sorangium
cellulosum 'So ce 56']
Length = 382
Score = 88.8 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 88/283 (31%), Gaps = 9/283 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ VGLFV++ L S I+ + + V GL + +R GI
Sbjct: 16 RARDLKVGLFVLAGLVLSAVVIFLIGDERRLFDSSVGFTTNF-ADVQGLKPGAPIRMGGI 74
Query: 64 PVGRIVGLFLDQE-YPNHSLAKALI--RPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G + + + K I + + + A I +GL G +EL+ +
Sbjct: 75 DIGHVAEVGYGPDPKDTKIYVKLEIVESEASRIKTDSVAQIANKGLLGDKMLELTKGQSP 134
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ +G+ + +K+S E + + L T+
Sbjct: 135 DSVPPGGHIPGEVPTDVMGKVTGMAEKAEATLDNIQKVS-----ENIADEKLHRDLRETV 189
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ T+ + + + + + S + + + ++ + S + ++ + +
Sbjct: 190 ASANTLMKQVTEGEGYPHRFLTDPEEAERISRTVQSLDRLSTELASAVREVRGVVSRVKE 249
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
V + + Q D T + H
Sbjct: 250 GPGFAHDVIYGDGPQKQIQQFGNAADEVAMTLRGIRESDSLAH 292
>gi|239815869|ref|YP_002944779.1| hypothetical protein Vapar_2893 [Variovorax paradoxus S110]
gi|239802446|gb|ACS19513.1| Mammalian cell entry related domain protein [Variovorax paradoxus
S110]
Length = 548
Score = 88.8 bits (217), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/394 (9%), Positives = 96/394 (24%), Gaps = 30/394 (7%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
V L S V F I VG++ LD + I + P + T+
Sbjct: 180 TDVGSLDVGSPVYFRRIKVGQVAAYELDGDGRG---VTLRIFVNAPY--DKFVGVNTRFW 234
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+ +AT A + +
Sbjct: 235 QASGIDAQLSASGFTLRTQSLATILLG------------GIAFQAPDDAMGPLAKENTAF 282
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ ++ + +T+ ++ + + K+
Sbjct: 283 TLAQDETAAMKEPDGPPQTLLMYFNQSLRGLTPGAPVDFRGVVIGEVKSIGVEFDRAERE 342
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + + + +R + + ++
Sbjct: 343 FRMPVLVQVYPDRLRRRAGESGVESRATQQERLRFLAEKGLRAQLRNGNLLTGQV---YV 399
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
K+ + + +S+ I+ + ++ + E I ++L +
Sbjct: 400 ALDFFPKAPPARIDVTKNPIELPTIANSLDEIQSQVQEIASKLNKVP-YEQIAADLRTTL 458
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ ++ L + AM R T R +
Sbjct: 459 ASLNKTLASTEQAVNRINT-DLTPELAAAMKDVRKTVNSAERTLAD--------DSPLQQ 509
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ +R+L + ER+P+ ++ G+
Sbjct: 510 DMRQTLRELTRAAGSVRVLTDYLERHPESLLRGK 543
Score = 53.4 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPDT 91
DGP +++ S+ GL+ + V F G+ +G + + ++ + + PD
Sbjct: 296 DGPPQTLLMYFNQSLRGLTPGAPVDFRGVVIGEVKSIGVEFDRAEREFRMPVLVQVYPDR 355
Query: 92 PLYPSTTATIRTQGLAGIT 110
+ + + ++
Sbjct: 356 LRRRAGESGVESRATQQER 374
>gi|86141377|ref|ZP_01059923.1| hypothetical protein MED217_05147 [Leeuwenhoekiella blandensis
MED217]
gi|85831936|gb|EAQ50391.1| hypothetical protein MED217_05147 [Leeuwenhoekiella blandensis
MED217]
Length = 316
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/290 (15%), Positives = 97/290 (33%), Gaps = 9/290 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ GL V + F +L +N + I +V+GLS S+V NG+
Sbjct: 4 SREVKTGLLAVVAIALLIFGYSFLKGNNLLNNDRTYYAIY--DNVEGLSPGSNVTINGLV 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG+++ + + L ++ D S+ A I GL G + + + +T
Sbjct: 62 VGKVLSIDFA-DSRGDLLVTFNVQNDFQFSTSSKAQIYGGGLIGGKNLSIVPDYERGETA 120
Query: 125 FQIATERNQRAMITATPSGINYFISNA---ENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
T A E + S + + K L TIA
Sbjct: 121 QSGDTLEGTIDEGIFELVNERLTPLQAKVEEVINSTDSVLVGVSDVLDQKTRKNLRETIA 180
Query: 182 NIETISTVLANNISHIDKMMHTTQVT--PHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I +T +++K++ ++ + SL K+ + ++
Sbjct: 181 QISETATNFNQASQNLNKLLADNDQKLTRTFTNLDEMSANFNKVSDSLSKVDINALVLRM 240
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+L + + S+ + ++D + + ++++ L+ D
Sbjct: 241 ESVLADFESISSKIENGEGTLGQFIND-DQMYNNLERATKQMEELMQDIK 289
>gi|153834583|ref|ZP_01987250.1| ABC-type transport system, periplasmic component [Vibrio harveyi
HY01]
gi|148869026|gb|EDL68071.1| ABC-type transport system, periplasmic component [Vibrio harveyi
HY01]
Length = 165
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKTELWVGSFVLAGICAILVMIFQVADVKSIGSGNTYTLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL--RK 119
+ +GR+ + L+ + I +++ I T GL G YI L
Sbjct: 64 VVIGRVSSITLNPDSLLPV-VSLSINSQYNQFPETSSVQILTSGLIGEQYIGLVPGFVFD 122
Query: 120 EKKTIFQIATERNQ 133
+++ + T +
Sbjct: 123 DEEMLVDGDTIEDT 136
>gi|33594881|ref|NP_882524.1| hypothetical protein BPP0163 [Bordetella parapertussis 12822]
gi|33599156|ref|NP_886716.1| hypothetical protein BB0165 [Bordetella bronchiseptica RB50]
gi|33564957|emb|CAE39904.1| putative exported protein [Bordetella parapertussis]
gi|33575202|emb|CAE30665.1| putative exported protein [Bordetella bronchiseptica RB50]
Length = 315
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++++ GLF +++L + W+ R P +I SV GLS S+VR+
Sbjct: 1 MENRSHALLAGLFTLALLVAAALVAIWVGRDRAALKP---YVIVSATSVSGLSAQSTVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ L + + P + PDTP+ ST A + QG+ G+ IEL
Sbjct: 58 QGVPVGKVQSLGFNPDKPAQVRISIGVAPDTPITESTWAELGVQGVTGLGNIELRDDGTS 117
Query: 121 KKTIFQIATERNQRA 135
+ + A
Sbjct: 118 TRRLASSAAMPATIP 132
>gi|301060026|ref|ZP_07200900.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300445905|gb|EFK09796.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 349
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 39/112 (34%), Gaps = 4/112 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T +G+FVVS + + + ++ SV GLS + V +
Sbjct: 1 MAKQASKTVIGVFVVSSIAMLIAGVIIFGG-GSLFKKTIKYVMFFEDSVKGLSVGAPVVW 59
Query: 61 NGIPVGRIVGLFLDQEYPNH---SLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+G+ +G + + L + P+ A +GL +
Sbjct: 60 HGVKIGSVSSIVLRANPEEITIDIPVVIEVDPELMQIEGKMAANPWEGLKRM 111
Score = 54.6 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/176 (12%), Positives = 62/176 (35%), Gaps = 10/176 (5%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+++ K+ +L++ S +K E A + N+ + + + +I ++ ++ I
Sbjct: 172 PVEKIADKLLDILANLDSLLKDPEIKALVHNLNEDSKKLGEAIENTDKLVLNADGRVTEI 231
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTSEKINRYI 390
+ +T L+D+ + ++ +S+ + L + M N +
Sbjct: 232 SDSVQMT--LSDAQKVLKNASRSLDGVSSDAKKLLQGLDGRIKPVMEKIETVLNSANSAL 289
Query: 391 PSIGNNLQNFS------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
L + + + ++ L+ ER+P ++ G+
Sbjct: 290 EGATKTLVTVNGFVGDRSGTRRKLNRALDEIAAAAKSLKSLLDYLERHPNALLMGK 345
>gi|238023144|ref|ZP_04603570.1| hypothetical protein GCWU000324_03070 [Kingella oralis ATCC 51147]
gi|237865527|gb|EEP66667.1| hypothetical protein GCWU000324_03070 [Kingella oralis ATCC 51147]
Length = 165
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 41/120 (34%), Gaps = 5/120 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGP---MAEVIIRIPGSVDGLSTDSS 57
M+ VGLFV+ + ++ G V + + L +
Sbjct: 1 MKKAILEFWVGLFVLLGFATLGILAFRVANGGDSFGAPSATYTVYAQF-DDIGSLKVQAP 59
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
++ G+ VGR+ + LD + + I A I T GL G YI L+
Sbjct: 60 IKSAGVLVGRVSDIQLDPQTF-QAKVSMQIEQKYAYSVDANAAILTSGLLGEQYIGLTQG 118
>gi|223936765|ref|ZP_03628675.1| Mammalian cell entry related domain protein [bacterium Ellin514]
gi|223894616|gb|EEF61067.1| Mammalian cell entry related domain protein [bacterium Ellin514]
Length = 333
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 54/307 (17%), Positives = 104/307 (33%), Gaps = 12/307 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K +G FVV L +I S ++ +++ SV+GL + V+F
Sbjct: 1 MSMKANPAKIGAFVVGGLVLLVGTIVLFG-SGRFFSHRVPLVVYFSDSVNGLVVGAPVKF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALIRPDTPLYPSTTATI-------RTQGLAGIT 110
G+PVG + + + + I L T+ I + Q G+
Sbjct: 60 KGVPVGTVKRIQIKVDDTGEASRIPVVIEIDEKQVLSSGGTSEIFKNPNYVKDQINKGLR 119
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
S K + +N G I + + S I +
Sbjct: 120 ASLESESFITGKLYIALDYYKNAGPPQFVQKEGPYQEIPSISTGLSEFIKSIGRIDIVGI 179
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + T T N + + K++++ +SSD K+ ++ K+
Sbjct: 180 STKLDETLTQLNQLVGQLQVKQMSEGVVKVLNSADKLINSSDLKDAIISLGKTSEETRKV 239
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ +D Q + I ++ KS ++ T+ +R + + +ID L +FS
Sbjct: 240 LTRLDQQLDP-LTTGINTTTAEATKSLTELRQTLEQIRGLVGSDSPLIGQIDGALQEFSD 298
Query: 291 KMKSKET 297
+S
Sbjct: 299 ASRSVRI 305
>gi|289645123|ref|ZP_06477147.1| virulence factor Mce family protein [Frankia symbiont of Datisca
glomerata]
gi|289505063|gb|EFD26138.1| virulence factor Mce family protein [Frankia symbiont of Datisca
glomerata]
Length = 373
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/362 (10%), Positives = 97/362 (26%), Gaps = 7/362 (1%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ G+F V+ L + D + V GL + SVR G+
Sbjct: 9 RSQAVKTGVFAVATSLVLLLISIQLGGFSFKDRDEYGAV---FTDVSGLKSGDSVRVAGV 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + + + + PL A +R + L G Y+EL E+K
Sbjct: 66 EVGKVSDVKTFENT--RAKVTFTVNTSRPLLTGAVAAVRYKNLTGDRYLELRQGPGEQKP 123
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTS--KKISDSSRHIQKIIENIEKPLTTTIA 181
+ + + +++ S + +++ + + +
Sbjct: 124 LPPGGVLPVTQTQPALDLDVLLAGFHPLFEGLAPDQLNQFSGELISVLQGEGGTIDSILT 183
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
++++ LA+ I +++ + D + T A D ++
Sbjct: 184 RTASLTSTLADRDVVIGQVVDNLNAVLGNLDDHSGQLGGTIDGLQHLVSGLAEDRTRLGG 243
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + + + + +
Sbjct: 244 SFDTASTLTTRLNDLLTDLREPFAGMVHELGRTATTLNEGRETIDTVLGLLPGAYLRVAR 303
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ST M ++ Q I + + + + +A
Sbjct: 304 VGSRESTYGMYICSLRVKLTGPDGQPIYTPWIGPSDNVERCKPGTAPLETPAQREQKAAA 363
Query: 362 LK 363
Sbjct: 364 QA 365
>gi|126441283|ref|YP_001060351.1| paraquat-inducible protein B [Burkholderia pseudomallei 668]
gi|167904205|ref|ZP_02491410.1| paraquat-inducible protein B [Burkholderia pseudomallei NCTC 13177]
gi|126220776|gb|ABN84282.1| paraquat-inducible protein B [Burkholderia pseudomallei 668]
Length = 551
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/407 (8%), Positives = 104/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 177 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 230
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 231 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 272
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 273 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 332
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + RE
Sbjct: 333 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREASQDKG----YAARREVLSRL 388
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 389 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 448
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 449 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 506
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 507 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 546
>gi|296165086|ref|ZP_06847639.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899579|gb|EFG79032.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 346
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 81/299 (27%), Gaps = 12/299 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + +L + + ++ + + GL VR
Sbjct: 1 MKITGSAIKLGIVSLVLLLITVSIVVVFAQMRFNSTNSYSAEFK---NATGLKNGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ + L + + + PLY +TTA IR L Y+EL E
Sbjct: 58 AGVEIGKVKAVRLI-DGGRRVMVDFDVDRSIPLYQTTTAQIRYLNLFADRYLELKRGEGE 116
Query: 121 --KKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENI 172
+ + R + E + S Q I
Sbjct: 117 GADRVLPPGGFIPLSRTAPALDLDALIGGFKPLFRALDPEKVNTIASAIITVFQGQGGTI 176
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L T I+ I + T + + + + +
Sbjct: 177 NDILDQTAQLTAHIAERDQAIGEVIKNLNTVLDTTVRHRKEFDQTVDNFERLITGLQNHA 236
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
I ++ + + ++ ++ Q + ++ L+ +
Sbjct: 237 DPLAAGTANISNATGTVADLLADNRALLHKAINYLQALQQPLVDQRDQLGDLIHKTPTA 295
>gi|296179487|gb|ADG96492.1| MceF [Gordonia cholesterolivorans]
Length = 470
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 2/133 (1%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F + + + + G ++ G+ G+ V
Sbjct: 1 MRLTRLVKWQLIVFALLTVVSVVYGAITYIGIGRVTGLGTYRVVAEFGAAGGVYESGLVT 60
Query: 60 FNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGR+ + LD P+ I D + ++A IR+Q G Y++L
Sbjct: 61 YRGVTVGRVDSVDLDLANPSAPVRVTLRIDSDRKVPRDSSAHIRSQSAVGEQYVDLIPRS 120
Query: 119 KEKKTIFQIATER 131
+ ++
Sbjct: 121 ADGPSLEDGDVLP 133
>gi|114797425|ref|YP_760948.1| hypothetical protein HNE_2253 [Hyphomonas neptunium ATCC 15444]
gi|114737599|gb|ABI75724.1| mammalian cell entry protein homolog [Hyphomonas neptunium ATCC
15444]
Length = 185
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 41/130 (31%), Gaps = 1/130 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T +G V+ + F + + SV G+S S VR
Sbjct: 1 MRESIFETLIGAIVIGVAGFFLWFALARGGDAASVSANQYEVTARFNSVSGISRGSDVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ G + + D E L K + L T A I T GL G YI L
Sbjct: 61 AGVKAGVVKSIDGDPETFEAVL-KLALDSKWALPDDTDARISTDGLLGGAYIALEPGAGF 119
Query: 121 KKTIFQIATE 130
E
Sbjct: 120 DTIAQDGTGE 129
>gi|120609011|ref|YP_968689.1| hypothetical protein Aave_0308 [Acidovorax citrulli AAC00-1]
gi|120587475|gb|ABM30915.1| Mammalian cell entry related domain protein [Acidovorax citrulli
AAC00-1]
Length = 326
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+FVV + WL+R + SV GL ++VR+
Sbjct: 1 MENKSHALAAGIFVVVVAALLAALGLWLTRDR---ASYQLYELSTRESVGGLQPQAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + P + L + + P+ P+T A + QG+ G+ ++ L
Sbjct: 58 KGVAVGKVTRIGFDPDVPGNVLIRIAVNDQAPVTPATFAVLGYQGVTGLAHVLLDDGNGP 117
Query: 121 KKTIFQIA 128
+ + + A
Sbjct: 118 QPALPRGA 125
>gi|224372886|ref|YP_002607258.1| mce related protein [Nautilia profundicola AmH]
gi|223589169|gb|ACM92905.1| mce related protein [Nautilia profundicola AmH]
Length = 467
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/355 (10%), Positives = 95/355 (26%), Gaps = 8/355 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
VG+F+ L F ++ ++ + I G GL+ + V+ G+ +
Sbjct: 3 NEVKVGVFIFLGLLSLIFLTLQVNSLQDFNKKGYTIYALI-GDASGLAKKAKVKMRGVEI 61
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT-- 123
G + L L+ +H K LI+ + ++ T+ G Y+++ +
Sbjct: 62 GSVEDLELE---NSHVKLKLLIKKGVKIPKNSVVTLAQDNFLGGKYVKIIPSQSYVFYKA 118
Query: 124 --IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + A + I + D ++
Sbjct: 119 GDVITRYVNTTSMDDVMANINTAVDDIKVLIKKLNRTLDEKTIANIKETIANIKDSSITL 178
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + + + N +I D SL +
Sbjct: 179 KSVLKTADNKLPVLLDNANDLVLEYKKAGVTLNNRLPSILDKTDSLLTKFNKTGDTINAK 238
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + +++ + + ++E + ++ + + S S L
Sbjct: 239 LDKLMDEYIKLGENANNILNDNKQGIKEAVASAKDFFVSGGESFKKIDNYLSSLSKSQIL 298
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+I + I I + + + S K+
Sbjct: 299 VDIQSNFMARDDYFKTSAYIAYLPVPTKYYILGVTSAKDFSDLSKINLDHQEDKV 353
>gi|94496556|ref|ZP_01303132.1| ABC-type transport system periplasmic component [Sphingomonas sp.
SKA58]
gi|94423916|gb|EAT08941.1| ABC-type transport system periplasmic component [Sphingomonas sp.
SKA58]
Length = 320
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 2/128 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ + VG + +L + +W SR +Q G E I SV GL+ S V +
Sbjct: 1 METRSNHVLVGTVTLLLLAAIMIAAFWFSRLSQ--GDNKEYDIFFKQSVSGLAKGSGVNY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P G++ + L + P+ + +R TP+ TTATI+ G G++ I L K
Sbjct: 59 AGVPSGQVEKIELWKRDPSFVKVRISVRDGTPILQGTTATIQGVGFTGVSEIVLDGAVKG 118
Query: 121 KKTIFQIA 128
I A
Sbjct: 119 APPIQCPA 126
>gi|296167387|ref|ZP_06849789.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897331|gb|EFG76935.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 516
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/272 (11%), Positives = 88/272 (32%), Gaps = 4/272 (1%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ +++++ +Y+L + + +P S GL ++V + GI +G++
Sbjct: 10 LIAFGILTVISLLVLGVYYLQLPSLAGIGRYTLKAELPAS-GGLYPTANVTYRGITIGKV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + A I + TA + + G Y++L + K + +
Sbjct: 69 TDVEP---TERGAEATMSIDSRYKIPTDATANVHSVSAVGEQYLDLESTGNPGKFLSEGQ 125
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
T P+ A KI+ + + + L + + + I
Sbjct: 126 TITKGTVPAEIGPALDTANRGLAVLPKDKIAQLLDETAQSVGGLGPALQRLVDSTQAIVG 185
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
NI+ ++ ++ + S + + A + V +L
Sbjct: 186 DFKTNITEVNDIIQNSGPVLDSQVKSSDAIERWARNLNRLGAQSAQEDAHVKSVLRQAAP 245
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+++ + V ++ + ++ ++
Sbjct: 246 TADQINDVFNDVRESLPQTLANLEVVFDLLKR 277
>gi|83718635|ref|YP_441815.1| paraquat-inducible protein B [Burkholderia thailandensis E264]
gi|167580639|ref|ZP_02373513.1| paraquat-inducible protein B [Burkholderia thailandensis TXDOH]
gi|167618743|ref|ZP_02387374.1| paraquat-inducible protein B [Burkholderia thailandensis Bt4]
gi|257137984|ref|ZP_05586246.1| paraquat-inducible protein B [Burkholderia thailandensis E264]
gi|83652460|gb|ABC36523.1| paraquat-inducible protein B [Burkholderia thailandensis E264]
Length = 551
Score = 88.8 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/407 (8%), Positives = 103/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 177 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 230
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 231 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIAFQ 274
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
S + + + + + ++ + V
Sbjct: 275 SPPNQTAGSPAPNNMTFRLGADEG--DAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 332
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + RE
Sbjct: 333 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREAAQDKG----YAARREMLSRL 388
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 389 VQHGLRGQLRTGNLLTSQLYVALDFFPKAAPAKIDLAREPVELPTVPNTLDELQLQVADI 448
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 449 AKKLDKVPFDQIGTNLNSALANADKLFKRLDT-EVAPEARDTLSAAKQTFTTAEATLQQ- 506
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 507 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 546
>gi|167725510|ref|ZP_02408746.1| paraquat-inducible protein [Burkholderia pseudomallei DM98]
gi|167740122|ref|ZP_02412896.1| paraquat-inducible protein [Burkholderia pseudomallei 14]
gi|167817333|ref|ZP_02449013.1| paraquat-inducible protein [Burkholderia pseudomallei 91]
gi|167825742|ref|ZP_02457213.1| paraquat-inducible protein [Burkholderia pseudomallei 9]
gi|167912463|ref|ZP_02499554.1| paraquat-inducible protein [Burkholderia pseudomallei 112]
gi|254191541|ref|ZP_04898044.1| mce family protein [Burkholderia pseudomallei Pasteur 52237]
gi|254299203|ref|ZP_04966653.1| mce family protein [Burkholderia pseudomallei 406e]
gi|157809095|gb|EDO86265.1| mce family protein [Burkholderia pseudomallei 406e]
gi|157939212|gb|EDO94882.1| mce family protein [Burkholderia pseudomallei Pasteur 52237]
Length = 551
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/407 (8%), Positives = 104/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 177 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 230
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 231 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 272
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 273 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 332
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + RE
Sbjct: 333 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREASQDKG----YAARREVLSRL 388
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 389 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 448
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 449 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 506
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 507 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 546
>gi|152978464|ref|YP_001344093.1| hypothetical protein Asuc_0788 [Actinobacillus succinogenes 130Z]
gi|150840187|gb|ABR74158.1| Mammalian cell entry related domain protein [Actinobacillus
succinogenes 130Z]
Length = 168
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG F++ + F ++ ++ + I ++ GL + ++ G+ +G
Sbjct: 8 EFWVGFFLLLGIAALVFMCLKVANVQGFNETKSYHITATFDNIGGLKVRAPMKVGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
R+ + LD++ + + + +++ +I+T GL G YI LS
Sbjct: 68 RVTDISLDEKTY-LPEVTIAVNDEYNQIPDNSSLSIKTSGLLGEQYISLSVGFD 120
>gi|84494806|ref|ZP_00993925.1| putative mce-related protein [Janibacter sp. HTCC2649]
gi|84384299|gb|EAQ00179.1| putative mce-related protein [Janibacter sp. HTCC2649]
Length = 342
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 49/137 (35%), Gaps = 4/137 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ + +F + + + ++ D + V GL+ VR
Sbjct: 1 MKTTSSLVKFVIFAIVTILATGTLAATIANIQPGDRSAYTAV---FTDVTGLAKGHEVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + H+ + + L T ATI+ + L G YI L+
Sbjct: 58 AGVRVGSVKDIKVS-DDRTHADVTFDVLTSSVLTQGTVATIKYRNLVGERYIALTQGPGG 116
Query: 121 KKTIFQIATERNQRAMI 137
T+ A +R
Sbjct: 117 AATLKSGARIPLERTHP 133
>gi|154148511|ref|YP_001406163.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter hominis ATCC BAA-381]
gi|153804520|gb|ABS51527.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter hominis ATCC BAA-381]
Length = 288
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/245 (16%), Positives = 86/245 (35%), Gaps = 1/245 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++N YT VGLFV+ I F ++W+ + + I G+ + V+F
Sbjct: 1 MENRNSYTIVGLFVMLIGAFLGIFMWWMLTRTEANETYRSYFIHTKELPVGIKEGADVKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-K 119
G+ G + + + I+ P+ + A + +QG++GI++I ++ +
Sbjct: 61 IGVNAGIVKKIDFIDMKNAIIEIELSIKDKLPISKDSIAKVESQGISGISFINITQGSGE 120
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ +A++ T KI+ + N T
Sbjct: 121 IFNENEKKPIISLDKALLDKIGKKAEVISDQVSETIYKINMLLSNQNIDKINKILTNFET 180
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + N + ID+ + + +S+ N F + + +
Sbjct: 181 FSKKLNDEKLTKNIYTAIDEFIKFQKTMDNSAKKFNNFIDNLNKTQNKISARIDNGDFNI 240
Query: 240 NQILE 244
+IL
Sbjct: 241 REILN 245
>gi|258546130|ref|ZP_05706364.1| toluene tolerance protein [Cardiobacterium hominis ATCC 15826]
gi|258518555|gb|EEV87414.1| toluene tolerance protein [Cardiobacterium hominis ATCC 15826]
Length = 170
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 2/165 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+++ +VGLFV+ L F S + + + + GLS ++ V +
Sbjct: 7 SNRSVSVAVGLFVLLALAAMVFLALQASNARGFRMSHPYEVNADFADISGLSKNAKVTMS 66
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ + DQ+ + I + L ++A I T GL G YI +
Sbjct: 67 GVQIGKVKSIGYDQDAY-KAKVVLEISGEYDRLPLDSSADILTAGLLGEKYIGIVPGGDP 125
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+ +M+ +A++ + K + +
Sbjct: 126 AMLQNGDTIQYTGSSMVLEKLIQQFVTQMSAKDDASKSTPQEPNP 170
>gi|301155765|emb|CBW15233.1| predicted ABC-type organic solvent transporter [Haemophilus
parainfluenzae T3T1]
Length = 168
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGISALVFLGLRVANVQGFGETKSYTVTATFDNIGGLKVRAPLKLGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
R+ + LD++ I + + +++ +I+T GL G YI LS
Sbjct: 68 RVSDITLDEKSY-LPKVSIAINEEYKEIPENSSLSIKTSGLLGEQYIALSMGFD 120
>gi|76811156|ref|YP_334753.1| paraquat-inducible protein [Burkholderia pseudomallei 1710b]
gi|126453320|ref|YP_001067611.1| mce family protein [Burkholderia pseudomallei 1106a]
gi|167847227|ref|ZP_02472735.1| mce family protein [Burkholderia pseudomallei B7210]
gi|167895815|ref|ZP_02483217.1| mce family protein [Burkholderia pseudomallei 7894]
gi|167920417|ref|ZP_02507508.1| mce family protein [Burkholderia pseudomallei BCC215]
gi|254180709|ref|ZP_04887307.1| mce family protein [Burkholderia pseudomallei 1655]
gi|254259645|ref|ZP_04950699.1| mce family protein [Burkholderia pseudomallei 1710a]
gi|76580609|gb|ABA50084.1| paraquat-inducible protein [Burkholderia pseudomallei 1710b]
gi|126226962|gb|ABN90502.1| mce family protein [Burkholderia pseudomallei 1106a]
gi|184211248|gb|EDU08291.1| mce family protein [Burkholderia pseudomallei 1655]
gi|254218334|gb|EET07718.1| mce family protein [Burkholderia pseudomallei 1710a]
Length = 551
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/407 (8%), Positives = 105/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 177 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 230
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 231 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 272
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 273 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 332
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + V RE
Sbjct: 333 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREVSQDKG----YAARREVLSRL 388
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 389 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 448
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 449 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 506
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 507 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 546
>gi|226198398|ref|ZP_03793967.1| mce family protein [Burkholderia pseudomallei Pakistan 9]
gi|225929581|gb|EEH25599.1| mce family protein [Burkholderia pseudomallei Pakistan 9]
Length = 522
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/407 (8%), Positives = 104/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 148 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 201
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 202 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 243
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 244 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 303
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + RE
Sbjct: 304 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREASQDKG----YAARREVLSRL 359
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 360 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 419
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 420 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 477
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 478 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 517
>gi|53720487|ref|YP_109473.1| paraquat-inducible protein [Burkholderia pseudomallei K96243]
gi|52210901|emb|CAH36889.1| paraquat-inducible protein [Burkholderia pseudomallei K96243]
Length = 553
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/407 (8%), Positives = 104/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 179 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 232
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 233 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 274
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 275 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 334
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + RE
Sbjct: 335 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREASQDKG----YAARREVLSRL 390
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 391 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 450
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 451 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 508
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 509 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 548
>gi|261885876|ref|ZP_06009915.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter fetus subsp. venerealis str. Azul-94]
Length = 234
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 1/119 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+KN Y GLF +L F + +++ +G I +G+ DS VRF
Sbjct: 1 MENKNSYFIAGLFFCIVLAMLTFFVLYMNIKGN-EGETRYYYIETKELPNGIKNDSQVRF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+P G + ++ K ++ D P+ + A + QG++GI YI +S
Sbjct: 60 IGVPAGIVKDIYFSDPKSATIEIKMSLKKDLPIKRDSVAVVEVQGISGIAYINISKGSD 118
>gi|300948848|ref|ZP_07162913.1| Mce family protein [Escherichia coli MS 116-1]
gi|300955782|ref|ZP_07168124.1| Mce family protein [Escherichia coli MS 175-1]
gi|300317328|gb|EFJ67112.1| Mce family protein [Escherichia coli MS 175-1]
gi|300451653|gb|EFK15273.1| Mce family protein [Escherichia coli MS 116-1]
Length = 183
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 57/146 (39%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|206889531|ref|YP_002248177.1| mce-related protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206741469|gb|ACI20526.1| mce-related protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 316
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 41/113 (36%), Gaps = 1/113 (0%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VG+ + L FF I + + I I V GL + VR G+ +G
Sbjct: 13 LKVGIVITVTLLIIFFVIVFSGGIQGLFKQRTSLNIYITD-VKGLRKGAPVRVAGVDIGA 71
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ + L +E+ L AT++T GL G YIE+
Sbjct: 72 VQEIKLSKEHGTVVKVSIDKDVLNYLKSDAKATVQTIGLLGDKYIEIFPGDSP 124
>gi|28899436|ref|NP_799041.1| ABC transporter [Vibrio parahaemolyticus RIMD 2210633]
gi|153839296|ref|ZP_01991963.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus AQ3810]
gi|260363395|ref|ZP_05776247.1| organic solvent ABC transporter, organic solvent-binding protein
[Vibrio parahaemolyticus K5030]
gi|260879330|ref|ZP_05891685.1| organic solvent ABC transporter, organic solvent-binding protein
[Vibrio parahaemolyticus AN-5034]
gi|260895711|ref|ZP_05904207.1| organic solvent ABC transporter, periplasmic organic
solvent-binding protein [Vibrio parahaemolyticus
Peru-466]
gi|260900284|ref|ZP_05908679.1| organic solvent ABC transporter, organic solvent-binding protein
[Vibrio parahaemolyticus AQ4037]
gi|28807672|dbj|BAC60925.1| putative ABC superfamily transport protein [Vibrio parahaemolyticus
RIMD 2210633]
gi|149747197|gb|EDM58185.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus AQ3810]
gi|308087387|gb|EFO37082.1| organic solvent ABC transporter, periplasmic organic
solvent-binding protein [Vibrio parahaemolyticus
Peru-466]
gi|308093107|gb|EFO42802.1| organic solvent ABC transporter, organic solvent-binding protein
[Vibrio parahaemolyticus AN-5034]
gi|308107565|gb|EFO45105.1| organic solvent ABC transporter, organic solvent-binding protein
[Vibrio parahaemolyticus AQ4037]
gi|308111231|gb|EFO48771.1| organic solvent ABC transporter, organic solvent-binding protein
[Vibrio parahaemolyticus K5030]
gi|328471427|gb|EGF42322.1| ABC transporter [Vibrio parahaemolyticus 10329]
Length = 162
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKTELWVGSFVLAGICAILVMIFQVADVKSIGSGDTYTLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +GR+ + L+ + I +++ I T GL G YI L
Sbjct: 64 VVIGRVSNITLNPDNLLPV-VSLSINSQYNQFPETSSVQILTSGLIGEQYIGLVPGFVFD 122
Query: 122 KTIFQIATER 131
+ +
Sbjct: 123 DEAMLVDGDT 132
>gi|254194810|ref|ZP_04901240.1| mce family protein [Burkholderia pseudomallei S13]
gi|15182956|gb|AAK13048.1| paraquat-inducible protein [Burkholderia pseudomallei]
gi|169651559|gb|EDS84252.1| mce family protein [Burkholderia pseudomallei S13]
Length = 553
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/407 (8%), Positives = 105/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 179 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 232
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 233 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 274
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 275 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 334
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + V RE
Sbjct: 335 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREVSQDKG----YAARREVLSRL 390
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 391 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 450
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 451 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 508
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 509 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 548
>gi|134280376|ref|ZP_01767087.1| mce family protein [Burkholderia pseudomallei 305]
gi|217420948|ref|ZP_03452453.1| mce family protein [Burkholderia pseudomallei 576]
gi|237813738|ref|YP_002898189.1| paraquat-inducible protein [Burkholderia pseudomallei MSHR346]
gi|242314447|ref|ZP_04813463.1| mce family protein [Burkholderia pseudomallei 1106b]
gi|134248383|gb|EBA48466.1| mce family protein [Burkholderia pseudomallei 305]
gi|217396360|gb|EEC36377.1| mce family protein [Burkholderia pseudomallei 576]
gi|237504660|gb|ACQ96978.1| paraquat-inducible protein [Burkholderia pseudomallei MSHR346]
gi|242137686|gb|EES24088.1| mce family protein [Burkholderia pseudomallei 1106b]
Length = 522
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/407 (8%), Positives = 105/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 148 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 201
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 202 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 243
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + + + ++ + V
Sbjct: 244 FQSPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPVDFRG 303
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + V RE
Sbjct: 304 IVLGQVTNIGIDFDPKTKNFTMPVTMNVYPDRLGRKFREVSQDKG----YAARREVLSRL 359
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 360 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPVKIDLAREPVELPTVPNTLDELQLQVADI 419
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 420 AKKLDKVPFDQIGANLNSALANADKLFKRLDT-EIAPEARDTLSAAKQTFTTAEATLQQ- 477
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 478 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 517
>gi|303246827|ref|ZP_07333104.1| Mammalian cell entry related domain protein [Desulfovibrio
fructosovorans JJ]
gi|302491844|gb|EFL51724.1| Mammalian cell entry related domain protein [Desulfovibrio
fructosovorans JJ]
Length = 302
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 90/293 (30%), Gaps = 11/293 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S++ Y ++ L + L N + +IR SV LS +V++ G
Sbjct: 8 SRSDYLKAYGTLLLGLCILGAFMVVLGG-NWFWVKYDHYLIRFT-SVKDLSPGRTVKYAG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ +GR+ + LD P++ + IR PLY T A I +GL G Y+ L +
Sbjct: 66 LDIGRVASIDLDPTDPHYIAVEIDIRQGFPLYTGTVARIAQKGLVGDYYVLLDLRGAPGE 125
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ T + M + A + I I I+ + T
Sbjct: 126 RLAPGGTIPSLPTMDLQELAA------KAGDLLDDIRPKINDIADNIDKLFSKENTESLR 179
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ---KV 239
+T T S+ T+ + + K + +++ + +
Sbjct: 180 RALENTPKLVEDLRRAANDFRTNWDRLSAKGGKAAETLDASLRRMAKAVASVEKELVKTL 239
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
I + + + +++ L+ +
Sbjct: 240 QNIQRKTDGIGGLVTDVRQGFNYDQEQLEDILKNLNRTSREVKDLMGRLRERP 292
>gi|262196493|ref|YP_003267702.1| hypothetical protein Hoch_3307 [Haliangium ochraceum DSM 14365]
gi|262079840|gb|ACY15809.1| Mammalian cell entry related domain protein [Haliangium ochraceum
DSM 14365]
Length = 339
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/336 (11%), Positives = 100/336 (29%), Gaps = 21/336 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+ + + I L G V + G++ + VR
Sbjct: 1 MGTRKIELRVGILIAVAVITLVGFIIVLGNFAFGGGYTLYVDLEFSGNI---QMGAPVRI 57
Query: 61 NGIPVGRIVGLFL-----DQEYPNHSLAKALI----RPDTPLYPSTTATIRTQGLAGITY 111
+GI +GR+ + D+ + + + I TQG+ G Y
Sbjct: 58 SGIKMGRVSSVDFWGGKIDESQGRRVQVRLEVWLKDDAREAVRQDAEFYINTQGVLGEQY 117
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+E+ R + T + ++ + E+ S+ + + +++++ N
Sbjct: 118 LEIVPGRDYQSPPLAPGTIVLGNS-PPRMDLLLSRLYTVLESVSEVLDEEREVLRELLHN 176
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + ++ + +++ T + I +
Sbjct: 177 SASAVAEVNRQLVDNRDTISQLLVGANELTREATATLGRVNEGLGDPRIIGKTVRDADAL 236
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV--------RETTQTFQEVGQKIDH 283
+ ++ + +I + +++ + D + +D
Sbjct: 237 LVTANRSLDTLTPSIDRFLGDATRATGLLTEERVDRAIAVVDKAASAATKAGGLIDNVDG 296
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
L++D S + E+I + ++
Sbjct: 297 LVTDLRSGKGTAGALLVREDIYADLRELLRDLNRNP 332
>gi|91215890|ref|ZP_01252859.1| VpsC protein [Psychroflexus torquis ATCC 700755]
gi|91185867|gb|EAS72241.1| VpsC protein [Psychroflexus torquis ATCC 700755]
Length = 329
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/349 (14%), Positives = 112/349 (32%), Gaps = 21/349 (6%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ + VGLF+V ++Y++ EV +V+GL ++VR
Sbjct: 1 MKQTAPHKARVGLFIVLGTIILVAALYFIGNRQHLFSKNMEVYAVF-QNVNGLQLGNNVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
++GI VG + + + E + + TATI + GL G + + +K
Sbjct: 60 YSGINVGTVATIEMMDEATIVVQMMVEEKTGAFIKKDATATIGSDGLVGSMVVNILPGKK 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
TI T Y A++ ++ ++++ + ++ K
Sbjct: 120 NLSTIKSGDTID-------------TYSKIGADDMLSTLNVTNKNAALLTADLLKITNKI 166
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + ++ + ++ + + T + + K K +
Sbjct: 167 LEGDGALGALITD------SLLTQDLRATFRNLKQTTDDAGGLISFLHYKFSKVDMEKSA 220
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
IL + + + + D+ ETTQ + ++ S F+ K +
Sbjct: 221 VGILLSDTLVGRQVGGLITNLQQSSVDISETTQQLNLMISELQDKESTFNYLTKDETLPK 280
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+++ ++ E E + S ++
Sbjct: 281 TIDSTMVEIKEASRKLNENMEALKHNFLFRGYFRKQERAARKESKSRKE 329
>gi|291532194|emb|CBL05307.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Megamonas hypermegale
ART12/1]
Length = 269
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 4/129 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E + VG+F L I +LS + I V GL + V +
Sbjct: 9 EKMSNEAKVGIFTTIGLALLIGIIVYLSGFSFGKEKDYTFDITFNQ-VTGLKIGAGVSYA 67
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
GI GR+ + ++ + +I+ + + + TI + GL G +I + +
Sbjct: 68 GIDAGRVSAIEAYKD---KARVTVVIKGNMQIAKDSLFTISSDGLMGEKFISIMPPQHPS 124
Query: 122 KTIFQIATE 130
E
Sbjct: 125 GEYLVGGEE 133
>gi|118578845|ref|YP_900095.1| hypothetical protein Ppro_0403 [Pelobacter propionicus DSM 2379]
gi|118501555|gb|ABK98037.1| Mammalian cell entry related domain protein [Pelobacter propionicus
DSM 2379]
Length = 545
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/395 (9%), Positives = 101/395 (25%), Gaps = 29/395 (7%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ L S + F I VG+++ LD++ + P A R
Sbjct: 174 SQDLGSLDIGSPLYFRRIKVGQVLSYELDKDGRG---VTFKVFVAAPYDRYVRANSRFWH 230
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+G+ IA + N + T + I + +
Sbjct: 231 ASGV----------------DIAIDANGLKVNTQSLVSIMVGGIAFQTLDEDAEAPPPDR 274
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+T + + V + +
Sbjct: 275 NLAFTLCANREEAMKQPDSYSNTYTMVFHESVRGLSVGAPVDFRGVIVGEVTGIQVEFDS 334
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
++ ++ + + + Q + LL
Sbjct: 335 RSKQLNMLVETRVYPHRMTSRSSQMLVSNPRDPQSYINQMVTYGLRGQLKSGNLVTGQLL 394
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
++ + S + SS+ + + K + + ++ + ++ +
Sbjct: 395 VSLDFFPRASKASINWSSDPPRFPTTPSSLVELEATLGKVMKKLERLP-LDEVVGDVRQA 453
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
Q F M + + + +A+ + R T + + +
Sbjct: 454 LQSFDATMKSTDQVVKRAGG-EVVPEARATLEEARKTLQTAKKVLEDDAP--------LQ 504
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ +R+L + ER+P+ ++ G+
Sbjct: 505 QDLRETLRELSRAAQSLRMLTDQLERHPESLISGK 539
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 35/102 (34%), Gaps = 4/102 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPDT 91
D + SV GLS + V F G+ VG + G+ ++ + + L + + P
Sbjct: 292 DSYSNTYTMVFHESVRGLSVGAPVDFRGVIVGEVTGIQVEFDSRSKQLNMLVETRVYPHR 351
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
S+ + + +YI + + Q
Sbjct: 352 MTSRSSQM-LVSNPRDPQSYINQMVTYGLRGQLKSGNLVTGQ 392
>gi|319793792|ref|YP_004155432.1| mammalian cell entry related domain protein [Variovorax paradoxus
EPS]
gi|315596255|gb|ADU37321.1| Mammalian cell entry related domain protein [Variovorax paradoxus
EPS]
Length = 556
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 37/394 (9%), Positives = 96/394 (24%), Gaps = 28/394 (7%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S V F I VG++ LD + + + P + T+
Sbjct: 186 TDIGSLDVGSPVYFRRIKVGQVAAYELDGDGRG---VTLRVFVNAPY--DKFVGVNTRFW 240
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+ +AT A + + + +
Sbjct: 241 QASGIDAQLSASGFTLRTQSLATILLGGIAFQAPDDAMGPLAKENTAFMLAQDEVAAMKE 300
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + + + + + + V ++ + + +
Sbjct: 301 PDGPSQTLLMYFNQSLRGLVPGAPVDFRGVVIGEVKSIGVEFDRAEREFRMPVLVQIYPD 360
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + Q + K + + + + + K +
Sbjct: 361 RLRRRETGQPQGTESRATQQERLRFLAEKGLRAQLRNGNLLTGSVYVALDFFPKAPPVQI 420
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
D + T ++ + Q E I ++L +
Sbjct: 421 DLAKNPIELPTV--------------ANSLDEIQSQVQEIASKLNKVPYEQIAADLRTTL 466
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ ++ N + + AM R T R +
Sbjct: 467 ATLNKTLTSAEQTVTRIN-NDVTPELAAAMKDVRKTVNTAERTLAD--------DSPLQQ 517
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ +R+L + ER+P+ ++ G+
Sbjct: 518 DMRQTLRELTRAAGSVRVLTDYLERHPESLLRGK 551
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DGP +++ S+ GL + V F G+ +G + + ++ + + + +Y
Sbjct: 302 DGPSQTLLMYFNQSLRGLVPGAPVDFRGVVIGEVKSIGVEFDRAER---EFRMPVLVQIY 358
Query: 95 PSTTATIRTQGLAG 108
P T G
Sbjct: 359 PDRLRRRETGQPQG 372
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 37/449 (8%), Positives = 110/449 (24%), Gaps = 35/449 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++R GP I+ + +GL ++V++ + +G + L L
Sbjct: 42 LIPIVAALVGVTLVARILLERGPE---IVLTFKTAEGLEAGKTAVKYKDVQIGLVQSLRL 98
Query: 74 DQEYP-NHSLAKALIRPDTPLYPSTTATIRTQGLA----------------GITYIELST 116
++ L + ++ + + L G
Sbjct: 99 ARDRSHVRVLVQLNKDAESFTSDDSRFWVVRPRLDTSGISGLGTLLSGAYIGADAGVSKE 158
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
E K + + + + + + + +
Sbjct: 159 TAGEFKGLEAPPIVTRDDSGQQFLLRATDIGSLDVGSPVYFRRIKVGQVAAYELDGDGRG 218
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT------------FNTITDLI 224
T + + + S + T F D +
Sbjct: 219 VTLRVFVNAPYDKFVGVNTRFWQASGIDAQLSASGFTLRTQSLATILLGGIAFQAPDDAM 278
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
L K A L + + + V ++ +
Sbjct: 279 GPLAKENTAFMLAQDEVAAMKEPDGPSQTLLMYFNQSLRGLVPGAPVDFRGVVIGEVKSI 338
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+F + ++ D R + + Q+ + + + L +
Sbjct: 339 GVEFDRAEREFRMPVLVQIYPDRLRR-RETGQPQGTESRATQQERLRFLAEKGLRAQLRN 397
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS-QS 403
+ + ++ + T ++ ++I + I + L +
Sbjct: 398 GNLLTGSVYVALDFFPKAPPVQIDLAKNPIELPTVANSLDEIQSQVQEIASKLNKVPYEQ 457
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERN 432
D++ + L +T+ + + +
Sbjct: 458 IAADLRTTLATLNKTLTSAEQTVTRINND 486
>gi|238928170|ref|ZP_04659930.1| mammalian cell entry like domain protein [Selenomonas flueggei ATCC
43531]
gi|238884130|gb|EEQ47768.1| mammalian cell entry like domain protein [Selenomonas flueggei ATCC
43531]
Length = 426
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/311 (11%), Positives = 87/311 (27%), Gaps = 15/311 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG F + + + G + +V GL+ ++ V +G+PVG
Sbjct: 4 EAKVGAFTLGGAALLIAVVVFFGGLRLSGGGDYTLYAGFHRAV-GLNPEAQVLLSGVPVG 62
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
R+ + D +I+ + + TI G+ G +I ++ +
Sbjct: 63 RVQDVVSDGAG---VTVSMVIQHGVKIPRGSAVTIGQPGIMGDKFIIITPNGNSDAYVSG 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT-------- 178
+ +N I ++ ++ ++ +
Sbjct: 120 DYLYGTDEMGMDTMFVELNKMIVLVQDMLTSVNAIVGAPGFQTSVVQLAVNMERVTANLD 179
Query: 179 --TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + + + + M S+ S + + + + +
Sbjct: 180 GLTATLEQMAAENRGDLHGILMNMNTMAANLAQSTASVERIMANLETVGADPATAENLRQ 239
Query: 237 QKVNQILENIQVSSNNF-VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
N + +++ +++ T D R + + K L+ SS +
Sbjct: 240 TLANITDASGRIAHIAAGIEAVAGDPQTQEDARTLIHNARTMTDKAGGLMGRLSSIKVTP 299
Query: 296 ETSAFLENIAD 306
+ D
Sbjct: 300 KVDIMYSGKTD 310
>gi|296171122|ref|ZP_06852575.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894378|gb|EFG74131.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 342
Score = 88.5 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 43/126 (34%), Gaps = 5/126 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ F+V + ++ G R G+V GL + VR G+ VG++
Sbjct: 11 RLAAFMVVCTLGLAAMLAIFAQLR--FGNELSYKARF-GNVSGLEAGNFVRIAGVEVGKV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + ++ L + A IR Q L G Y+ L + +
Sbjct: 68 RKISIQDD--GTAVVDFSADDTVVLTEGSRAVIRYQNLIGGRYLALQEGPGGTRQLRPGD 125
Query: 129 TERNQR 134
T R
Sbjct: 126 TIPLSR 131
>gi|296167383|ref|ZP_06849785.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897327|gb|EFG76931.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 346
Score = 88.1 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 28/119 (23%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +F + +L F+ I + +V GL VR
Sbjct: 1 MKITGTIVRLSIFSLVLLVFTVMIIVVFGQMRFDSTNSY---AAEFTNVSGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ +G++ + L + + K + PLY STTA IR L G Y+EL
Sbjct: 58 SGVEIGKVDKVELA-DGGKRARVKFNVDRSVPLYQSTTAQIRYLDLIGNRYLELKRGEG 115
>gi|269124781|ref|YP_003298151.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268309739|gb|ACY96113.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 345
Score = 88.1 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 88/295 (29%), Gaps = 12/295 (4%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+VGL L S+Y + + S GL VR G+ V
Sbjct: 10 NRIAVGLVSAGTLIALVVSVYLIGTEGLLLRR-YTMSGVFADS-GGLRAGDQVRVAGVDV 67
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + D + + + D L T A I+ + G Y+ LS ++
Sbjct: 68 GEVTEVKPDYDN-GRVIVTWKVDSDVDLGVGTRAEIKVSNVLGGRYLRLSGPVGPRRMAD 126
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSS---------RHIQKIIENIEKPL 176
R T+ P +N + ++ K+ S ++ + + + L
Sbjct: 127 LPEERRRIPIERTSVPHTVNDMLKSSTEAINKLDTKSIRTIVEELGGIGERDRDRLSRAL 186
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T ET++ +D + + ++ +A
Sbjct: 187 TNLTELAETVNESSPRIRELLDNGERLVHLARTKEQQLIALMNNVRALLEELRLRRAELS 246
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + + ++ + D++ T + +++ LL+
Sbjct: 247 AFLGGGNATVNAMTTLIDRQQAKLTQIMEDLQVTLAGLRPANDELNELLAWAGPT 301
>gi|54310334|ref|YP_131354.1| ABC transporter [Photobacterium profundum SS9]
gi|46914775|emb|CAG21552.1| putative ABC superfamily transport protein [Photobacterium
profundum SS9]
Length = 166
Score = 88.1 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 2/129 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+K VG F+++ + ++ ++ + ++ GL S ++ G
Sbjct: 11 NKKLELWVGTFIMAGIAALLVLVFKVADVQNIGTNDTYTLTAHFDNIGGLKVRSPIKVGG 70
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGRI+ + LD E I +++A I T GL G Y+ +S +
Sbjct: 71 VSVGRIIDISLDTESFTPV-VTMAIEKKYGYFPETSSAAILTAGLLGEQYLGISPGFIDD 129
Query: 122 KTIFQIATE 130
+
Sbjct: 130 DIEMLHDGD 138
>gi|189462572|ref|ZP_03011357.1| hypothetical protein BACCOP_03262 [Bacteroides coprocola DSM 17136]
gi|189430733|gb|EDU99717.1| hypothetical protein BACCOP_03262 [Bacteroides coprocola DSM 17136]
Length = 295
Score = 88.1 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 92/284 (32%), Gaps = 8/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL ++ L F I +L N + P + + ++GL+ S V NG VG
Sbjct: 4 EVKIGLAGIAALLILFCGINYLKGINMF-KPESYYHVEFTD-INGLAQSSPVFANGFKVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + + P H + + + + + A + T+ L + +
Sbjct: 62 IVRDIEYNYQKPGHVVVGIEMDQEMKIPTGSKAELITEMLGTVKMNLILNHESTTYYN-- 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
E + T + + + + + + P + +
Sbjct: 120 ---EGDTLPGTANTGLLGAAEKDLLPKMEQMLPKLDSILGSLNKLLADPALSKTLHNAEQ 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T N+ S + +T V + + + + +L + A L K + L+N+
Sbjct: 177 LTASLNSTSAQLNKLMSTDVPQLTGNVTAITENLKTITDNLKGVDYASTLAKADSTLQNV 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ ++ + + + ++D LL D S
Sbjct: 237 YLLTDKLNRKDNTLGLLMND-SSLYNNLNATTANAASLLEDLKS 279
>gi|167838137|ref|ZP_02464996.1| mce family protein [Burkholderia thailandensis MSMB43]
Length = 169
Score = 88.1 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKIALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D +L + P ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIDLDKQYPFPKDSSAKILTSGLLGEQYIGLDPG 118
>gi|256422331|ref|YP_003122984.1| hypothetical protein Cpin_3316 [Chitinophaga pinensis DSM 2588]
gi|256037239|gb|ACU60783.1| Mammalian cell entry related domain protein [Chitinophaga pinensis
DSM 2588]
Length = 266
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 48/129 (37%), Gaps = 2/129 (1%)
Query: 1 MESKNY-YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ K VG+F ++ + R+ G + +V GL ++VR
Sbjct: 1 MQQKAKQKIKVGIFATVAFALLLIGVFLIGRNKNMFGNTFLLYGTFK-NVGGLQAGNNVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
F GI VG + + + + + + + A I + GL G I +S+ ++
Sbjct: 60 FVGIDVGTVESIEILSDTTARVALRIKEKVQPFIKKGAVAGISSDGLMGDKLITISSGKE 119
Query: 120 EKKTIFQIA 128
+ +
Sbjct: 120 NAEPVKDGD 128
>gi|238026265|ref|YP_002910496.1| Paraquat-inducible protein B [Burkholderia glumae BGR1]
gi|237875459|gb|ACR27792.1| Paraquat-inducible protein B [Burkholderia glumae BGR1]
Length = 546
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/407 (8%), Positives = 103/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 172 DEKGTSYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGKG---VTFNVFVNAPYD 227
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
R +G+ S+ K S + A
Sbjct: 228 QYVGTNTRWWQASGVDLRLDSSGFKLNTQSLATVILGGLAFQSPPNQSAGEPVKNGATFR 287
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + ++ + V
Sbjct: 288 LG--------------------ADQADAMRDPDGQPVDVVMNFNQSLRGLSVGAPVDFRG 327
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + I ++ ++
Sbjct: 328 IVLGNVTNIGIEYDPQHKNFMMPVTMNIYPERLGKRFR----ELVASQGEAAQQDILRSL 383
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
E G + + + F + R + + + +
Sbjct: 384 VEHGLRGQLRTGNLLTSQLYVAVDFFPKAPRAKLDLSRKPVELPTVPNTLDELQLQVADI 443
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + + + + + + + A+ + + T +
Sbjct: 444 AKKLDKVPFDQIGNNLNDALKHADQLFQQLDTQ-VAPQARDTLSAAKQTFTTAEATLQQ- 501
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ ++ + ER+P+ ++ G+
Sbjct: 502 -------DSPLQSDVRGALKELTRTLRTLNNLADYLERHPESLLRGK 541
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 29/85 (34%), Gaps = 8/85 (9%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
V L + + E+ I S +GL + V++ + +G
Sbjct: 36 LVWLVPLVAALIGVGLVVK-----SVFDRGPEITISF-RSAEGLEPGKTQVKYKDVEIGT 89
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTP 92
+ + L ++ +H L ++ +
Sbjct: 90 VKTIKLSKD-LSHVLVNVQLKKEAE 113
>gi|148263314|ref|YP_001230020.1| hypothetical protein Gura_1243 [Geobacter uraniireducens Rf4]
gi|146396814|gb|ABQ25447.1| Mammalian cell entry related domain protein [Geobacter
uraniireducens Rf4]
Length = 360
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/356 (9%), Positives = 95/356 (26%), Gaps = 19/356 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
G+F+V L F + + ++ P ++ + + V GL + V G+ V
Sbjct: 10 SQLKAGIFIVFSLLFFAGGVLLMGEKTKFFIPKGKLSVIMTD-VAGLKVGAPVWLAGVDV 68
Query: 66 GRIVGLFLD-QEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
G + + + N I + + + T++T+GL G Y+
Sbjct: 69 GIVTEVHFEKPNRTNEVEVILEIERESLKKIGKDSLITVKTRGLMGEKYV---------- 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ I+ ++ +K + + ++ + + T
Sbjct: 119 -----DITPSLHVSTAPETRLYGTSITKLDDVMQKAGSAFDRLNLAMDKMNRGEGTMGRL 173
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ + + + + + Q
Sbjct: 174 AKDPKLYDNLVKLTAELDTFAKNTNSGEGTLGKLSRSREPYDKLMSILNRTDQTLNDVQT 233
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ + + D+++ + +E+ +K+ S + +E
Sbjct: 234 SDGTLGKLLHDRQLYDKLVALADKSNQAADDVRELNKKLTSKDSTIGKLLGDREFYDKGM 293
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ + N + + + + + +N L+ +
Sbjct: 294 ALIERADNSVKAFEEVAARVNHGDGTAGRLMNERVLYDKMNKMVDDVDFLIKDLKE 349
>gi|296169580|ref|ZP_06851200.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895846|gb|EFG75541.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 350
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 81/286 (28%), Gaps = 11/286 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ G F ++ + F + + + L +VR G
Sbjct: 4 SRAMIVKFGAFAAVMILLTVFLFFIFGQYRTGSTNGYS---ALFTDASRLKPGETVRVAG 60
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I VG + + L + L K + L T A +R L G Y+EL K
Sbjct: 61 IRVGTVNSVALRSD--KKVLVKFDTDRNVVLTTGTRAVVRYLNLVGDRYLELVDGPGSTK 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPL 176
+ A R + + + ++ + + Q ++ L
Sbjct: 119 VLQAGAEIPIDRTAPALDLDLLLGGLKPVITGLNPHDVNELTTALVQIFQGEGGTLQSLL 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ T + T++ ID + D + + S +
Sbjct: 179 SETSSFSNTLADNNQTVQQLIDNLKTVVGTLADDGDKFSGALDRLQRLISGFSQDRNTIG 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
++ + + ++ + + TV + + +ID
Sbjct: 239 AAIDSLDKGTASLADLLSNARRPLAGTVDQLNRLAPLLDQDKDRID 284
>gi|87311115|ref|ZP_01093239.1| hypothetical protein DSM3645_18886 [Blastopirellula marina DSM
3645]
gi|87286206|gb|EAQ78116.1| hypothetical protein DSM3645_18886 [Blastopirellula marina DSM
3645]
Length = 358
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 33/348 (9%), Positives = 110/348 (31%), Gaps = 11/348 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VG+ +++ L + + L + + G++ D+ VR
Sbjct: 1 MDDRILQFRVGVVMLAALMIAGILFFLLGEFPTLVTDRNTLYVVF-DQAPGVTVDTPVRT 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI +GR+ + L ++ L I + I + + G +E +
Sbjct: 60 SGILIGRVSDVALQEDRD--VLVTLKIDRKYMPRSNDVCRITSGSILGDALLEFVPGERP 117
Query: 121 KKT--------IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ + + N + + +S + +++ + + +++
Sbjct: 118 TQQVTVLQDKAMIEGLVANNPLDTLRNLEGQMATALSTIDQAGREVGTFAHNANEMLVGN 177
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ E N + I+ ++ ++ ++ + +L + ++
Sbjct: 178 GNQFQRILQKSELALDRFDNAMLAINNLVADEELNKRLHEALEGLPETLNESRALIERMQ 237
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + + + K + N ++ +++ + + S
Sbjct: 238 GVVDKADRNLENLEGFTEPLGEKGEQLIANLETSTENLSEMIEQLARLARAANNPDGSLG 297
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ +N+ ++ N++ + ++ I + + I I
Sbjct: 298 QIMNNPQLYQNLNEAAENVQEISAKLKPIINDVRVFTDKIARDPGIIG 345
>gi|215425377|ref|ZP_03423296.1| MCE-family protein mce1B [Mycobacterium tuberculosis T92]
gi|289748646|ref|ZP_06508024.1| MCE-family protein mce1B [Mycobacterium tuberculosis T92]
gi|289689233|gb|EFD56662.1| MCE-family protein mce1B [Mycobacterium tuberculosis T92]
Length = 346
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/303 (14%), Positives = 86/303 (28%), Gaps = 12/303 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ V +LFF+ I + +V GL VR
Sbjct: 1 MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAE---FSNVSGLRQGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G++ L L + + I PLY STTA IR L G Y+EL +
Sbjct: 58 SGVEIGKVKALHLV-DGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEGK 116
Query: 121 --KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS------RHIQKIIENI 172
+ + R + ++ Q I
Sbjct: 117 GANDLLPPGGLIPSSRTSPALDLDALIGGFKPVFRALDPAKVNNIVNALITVFQGQGGTI 176
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L T I+ + + T + + + + +
Sbjct: 177 NDILDQTAQLTSQIAERDQAIGEVVKNLNIVLDTTVKHRKEFDETVNNLENLITGLRNHS 236
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ I ++ ++ V V + Q + ++D LL + +
Sbjct: 237 DQLAGGLAHISNGAGTVADLLAENRTLVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTAL 296
Query: 293 KSK 295
+
Sbjct: 297 TAL 299
>gi|294994644|ref|ZP_06800335.1| MCE-family protein mce1B [Mycobacterium tuberculosis 210]
Length = 135
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ V +LFF+ I + +V GL VR
Sbjct: 1 MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAE---FSNVSGLRQGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ +G++ L L + + I PLY STTA IR L G Y+EL
Sbjct: 58 SGVEIGKVKALHLV-DGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEG 115
>gi|31791772|ref|NP_854265.1| MCE-family protein MCE2B [Mycobacterium bovis AF2122/97]
gi|121636508|ref|YP_976731.1| mce-family protein mce2B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|215402358|ref|ZP_03414539.1| mce-family protein mce2B [Mycobacterium tuberculosis 02_1987]
gi|215410131|ref|ZP_03418939.1| mce-family protein mce2B [Mycobacterium tuberculosis 94_M4241A]
gi|215425822|ref|ZP_03423741.1| mce-family protein mce2B [Mycobacterium tuberculosis T92]
gi|215429423|ref|ZP_03427342.1| mce-family protein mce2B [Mycobacterium tuberculosis EAS054]
gi|215444703|ref|ZP_03431455.1| mce-family protein mce2B [Mycobacterium tuberculosis T85]
gi|219556432|ref|ZP_03535508.1| mce-family protein mce2B [Mycobacterium tuberculosis T17]
gi|224988980|ref|YP_002643667.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|260185467|ref|ZP_05762941.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
gi|260199594|ref|ZP_05767085.1| MCE-family protein [Mycobacterium tuberculosis T46]
gi|289441979|ref|ZP_06431723.1| MCE-family protein Mce4B [Mycobacterium tuberculosis T46]
gi|289568523|ref|ZP_06448750.1| MCE-family related protein [Mycobacterium tuberculosis T17]
gi|289744304|ref|ZP_06503682.1| MCE-family protein mce2b [Mycobacterium tuberculosis 02_1987]
gi|298524077|ref|ZP_07011486.1| mce-family protein mce2b [Mycobacterium tuberculosis 94_M4241A]
gi|31617359|emb|CAD93467.1| MCE-FAMILY PROTEIN MCE2B [Mycobacterium bovis AF2122/97]
gi|121492155|emb|CAL70620.1| mce-family protein mce2B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772093|dbj|BAH24899.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|289414898|gb|EFD12138.1| MCE-family protein Mce4B [Mycobacterium tuberculosis T46]
gi|289542277|gb|EFD45925.1| MCE-family related protein [Mycobacterium tuberculosis T17]
gi|289684832|gb|EFD52320.1| MCE-family protein mce2b [Mycobacterium tuberculosis 02_1987]
gi|298493871|gb|EFI29165.1| mce-family protein mce2b [Mycobacterium tuberculosis 94_M4241A]
gi|326902422|gb|EGE49355.1| MCE-family protein [Mycobacterium tuberculosis W-148]
Length = 343
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 83/297 (27%), Gaps = 9/297 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ +G+ + + F+ I + V GL VR
Sbjct: 1 MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVR--FHHTTGYSAVFTH-VSGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L + L + L +TTA+IR L G Y+EL
Sbjct: 58 AGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTASIRYLNLIGDRYLELGRGHSG 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAEN-----TSKKISDSSRHIQKIIENIEKP 175
++ + + F + + S Q I
Sbjct: 117 QRLAPGATIPLEHTHPALDLDALLGGFRPLFQTLDPDKVNSIASSIITVFQGQGATINDI 176
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L T + T++ ++ + T + +++ + K
Sbjct: 177 LDQTASLTATLADRDHAIGEVVNNLNTVLATTVKHQTEFDRTVDKLEVLITGLKNRADPL 236
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
I ++ + ++ + Q + ++DH+L
Sbjct: 237 AAAAAHISSAAGTLADLLGADRPLLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAY 293
>gi|15602041|ref|NP_245113.1| hypothetical protein PM0176 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720396|gb|AAK02260.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 168
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/121 (20%), Positives = 50/121 (41%), Gaps = 3/121 (2%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ Y VGLF++ + F ++ + + I ++ GL + ++
Sbjct: 1 MRQTRIYEFWVGLFLLLGMAALVFLGLKVANIQGFSETKSYKIHATFDNIGGLKVRAPLK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ +GR+ + LD + I + +++ +I+T GL G YI LS
Sbjct: 61 VGGVVIGRVADITLDAKSYLPI-VTVAIDERYNEIPETSSLSIKTSGLLGEQYIALSIGF 119
Query: 119 K 119
Sbjct: 120 D 120
>gi|311109429|ref|YP_003982282.1| Mce related family protein 4 [Achromobacter xylosoxidans A8]
gi|310764118|gb|ADP19567.1| Mce related family protein 4 [Achromobacter xylosoxidans A8]
Length = 318
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++++ G+F + +L + W+ R + I +V GL+ S+VR+
Sbjct: 1 MENRSHALMAGIFTLVLLAAAALVAIWIGRDR---TQLQPYEIISATAVSGLNPQSTVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ L L+ + P + + P+TP+ ST A + QG+ G++ +EL
Sbjct: 58 QGVPVGKVQSLALNPDKPGQVRIRIGVAPNTPITESTWAELGVQGVTGMSNVELRDDGTS 117
Query: 121 KKTIFQIATERNQRA 135
K + A
Sbjct: 118 MKRLASSAAHPAAIP 132
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 14/164 (8%), Positives = 51/164 (31%), Gaps = 13/164 (7%)
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
++ ++ + + + A ++ ++T +S +A +++ K+ ++++
Sbjct: 147 KLISNVEEVTEQLRRVLSEQNVQALTASLQNATDITQSLRAASQDLGPTMAKLGPLMDSL 206
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
+ + + ++++ +L ++ A + I
Sbjct: 207 DKTSRQADRAAREVGDLAAQARQSLARLNAPGGP-------------LSAATSSLNDIAL 253
Query: 396 NLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L I + + L + PQ ++G
Sbjct: 254 AAARLDGETLPAITGMAANVSAAARGATVTLRRVDNTPQSFLFG 297
>gi|254253207|ref|ZP_04946525.1| Paraquat-inducible protein B [Burkholderia dolosa AUO158]
gi|124895816|gb|EAY69696.1| Paraquat-inducible protein B [Burkholderia dolosa AUO158]
Length = 539
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/407 (7%), Positives = 101/407 (24%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + + T S +
Sbjct: 219 ----------------YDQYVGVNTRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + ++ + + +
Sbjct: 260 ---AFQTPPNQGSGATAPNNTTFRLASDEGDAMRDPDGQPLQVVMNFNQSLRGLGVGAPV 316
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +T++ + N+ RE +
Sbjct: 317 DFRGIVLGEVTNIGIDYDPKTKNFRMPVTMNVYPERLGRRFRETIESQGEAARREIVERL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
E G + + + F + + + + +
Sbjct: 377 VEHGLRGQLRTGNLLTSQLYVALDFFPKAPPAKVDTAHQPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALANADKLFKQLDTQ-VAPEARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 534
>gi|313891790|ref|ZP_07825395.1| conserved hypothetical protein [Dialister microaerophilus UPII
345-E]
gi|313119784|gb|EFR42971.1| conserved hypothetical protein [Dialister microaerophilus UPII
345-E]
Length = 383
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 76/230 (33%), Gaps = 4/230 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VG+F + + I LS S + + +GL + + +
Sbjct: 1 MKKWSAEAKVGIFTLLGIILFAVLIVQLSHSVLFGKSGFYITGYFNE-AEGLKSGDKIHY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + ++ ++ + + +I T + G ++++ E
Sbjct: 60 AGVDVGVVEKISVE---KGKAVLHIKLYNGVEIPEDADFSIETNSVMGSRFVKVFGGHAE 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + + T + ++ K+ ++ +
Sbjct: 117 KGYLSDGMIVVGKATPGIDATIQKMDKLIDTTQTMVEGINTIVADTKVQNEVKNSIGNIE 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + T+ + ++ + T+ + D N +T + ++
Sbjct: 177 SVSKNLHTLTLQGMQIANQAQNVTEKMDNMLDELNGDGKLTKDVRNVMNN 226
>gi|31791348|ref|NP_853841.1| MCE-family protein MCE1B [Mycobacterium bovis AF2122/97]
gi|121636082|ref|YP_976305.1| MCE-family protein mce1B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988555|ref|YP_002643242.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|260185033|ref|ZP_05762507.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
gi|260203315|ref|ZP_05770806.1| MCE-family protein [Mycobacterium tuberculosis K85]
gi|289445701|ref|ZP_06435445.1| MCE-family protein mce1C [Mycobacterium tuberculosis CPHL_A]
gi|289572750|ref|ZP_06452977.1| MCE-family protein mce1B [Mycobacterium tuberculosis K85]
gi|31616933|emb|CAD93040.1| MCE-FAMILY PROTEIN MCE1B [Mycobacterium bovis AF2122/97]
gi|121491729|emb|CAL70191.1| MCE-family protein mce1B [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224771668|dbj|BAH24474.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|289418659|gb|EFD15860.1| MCE-family protein mce1C [Mycobacterium tuberculosis CPHL_A]
gi|289537181|gb|EFD41759.1| MCE-family protein mce1B [Mycobacterium tuberculosis K85]
Length = 346
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/303 (14%), Positives = 85/303 (28%), Gaps = 12/303 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ V +LFF+ I + +V GL VR
Sbjct: 1 MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAE---FSNVSGLRQGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G++ L L + + I PLY STTA IR L G Y+EL +
Sbjct: 58 SGVEIGKVKALHLV-DGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEGK 116
Query: 121 --KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS------RHIQKIIENI 172
+ R + ++ Q I
Sbjct: 117 GANDLLPPGGLIPLSRTSPALDLDALIGGFKPVFRALDPAKVNNIANALITVFQGQGGTI 176
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L T I+ + + T + + + + +
Sbjct: 177 NDTLDQTAQLTSQIAERDQAIGEVVKNLNIVLDTTVKHRKEFDETVNNLENLITGLRNHS 236
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ I ++ ++ V V + Q + ++D LL + +
Sbjct: 237 DQLAGGLAHISNGAGTVADLLAENRTLVRKAVSYLDAIQQPVIDQRVELDDLLHKTPTAL 296
Query: 293 KSK 295
+
Sbjct: 297 TAL 299
>gi|39996997|ref|NP_952948.1| virulence factor Mce family protein [Geobacter sulfurreducens PCA]
gi|39983885|gb|AAR35275.1| virulence factor Mce family protein [Geobacter sulfurreducens PCA]
gi|298506014|gb|ADI84737.1| ABC transporter, periplasmic substrate-binding protein, MCE
domain-containing [Geobacter sulfurreducens KN400]
Length = 349
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/368 (10%), Positives = 110/368 (29%), Gaps = 23/368 (6%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VG F ++ L + L + + S GL VR G+
Sbjct: 4 STEKKVGFFFMAGLVVL-GVMLELGERWNPFEKNLPYVTYLS-STTGLKVGDPVRLAGVE 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG+I + ++ ++P T + + ATIR L G ++ +S + +
Sbjct: 62 VGKITRIDIE---DGRVKVGFEVKPGTRIKTDSVATIRLTNLLGGQFLGISFGTQTADIL 118
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ +++ + I+ + N + +K + + ++T +
Sbjct: 119 APGSEVKSREI------ANIDIIVDNVSDLTKDARTFLNDLNTNQNEVLGKISTMLDENR 172
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
N++ I M + ++ L+ +L + +
Sbjct: 173 GNLKGAVQNLNSITAKMDRGE------------GSLAMLLNDKALYQNTNELATSLKTVT 220
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + + + I + + + S E +
Sbjct: 221 GKIERGEGSLGKLVNEDALYVEAKGALAELNAGAKDIKEIAAKINKGEGSVGKLVHDEAL 280
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
+ + +IS + ++ Q + + + + + + +K + +++ +
Sbjct: 281 YNELRDASKNISDVARKINEGQGTLGKLVNDDKLYRDTAAAMKKLDKAADGLSDSGPISV 340
Query: 365 NNSLFKDA 372
S+
Sbjct: 341 LGSVVGTL 348
>gi|33151498|ref|NP_872851.1| hypothetical protein HD0257 [Haemophilus ducreyi 35000HP]
gi|33147718|gb|AAP95240.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 161
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 45/114 (39%), Gaps = 2/114 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFV+ L F ++ + + ++ GL S ++ G+ +G
Sbjct: 8 EFWVGLFVLFGLASLVFLGLRVANVQGFTTEKTYTLYATFNNIGGLKNHSPIKVGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
R+ + LD + I + +++ +I+T GL G YI L+
Sbjct: 68 RVSNIDLDPQTYTP-RVTLAINQTFNKIPDTSSLSIKTSGLLGEQYIVLNVGFM 120
>gi|22299950|ref|NP_683197.1| hypothetical protein tll2407 [Thermosynechococcus elongatus BP-1]
gi|22296135|dbj|BAC09959.1| tll2407 [Thermosynechococcus elongatus BP-1]
Length = 397
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/388 (11%), Positives = 102/388 (26%), Gaps = 33/388 (8%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + VGL +++ L + WL N + + + + GL+ + VR+
Sbjct: 4 SRRVQESLVGLVILAGLATLGVGLLWLRG-NLAGANSYTLEVEL-DTAPGLAVGTQVRYR 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VGR+ + D I + + IR G G +++ +
Sbjct: 62 GVQVGRVTAIGFDANG---VQVSVRIN-NVLIPRRAVPEIRQSGFIGQAFLDFTPKE--- 114
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
A + + + +
Sbjct: 115 ---RVPEIPEGVTAFAPKCQ-----------------PELVYCNGDRVTGVRTASLEDLV 154
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T T I+ + + T + ++
Sbjct: 155 RAATRFTTALEESGLINNANTLILGATRIVNRADQSLTKVTTALDSFNALSNQARAELRN 214
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
Q + + S+ V + + + + +++ L E L
Sbjct: 215 FGIAAQAVTRAANQISEIVEVNRNTINSSLRNIDSAARELRTTLKALHPLTNQLEQGELL 274
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
N+ N + + + +++ + + +I L+ + F N++
Sbjct: 275 ANLDALIKNGAEAAANLNKVSGALSSPLIML----SIAQTLDAARATFINAQKLTNDLLK 330
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRY 389
L + S D +R + R
Sbjct: 331 LTSDPSFQSDLRRLIQILRRLLASSQDL 358
>gi|326903574|gb|EGE50507.1| hypothetical protein TBPG_01450 [Mycobacterium tuberculosis W-148]
Length = 342
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 79/303 (26%), Gaps = 11/303 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G+F+ L +F I DG +V L T VR G+ VG+
Sbjct: 10 VRLGVFLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFA---NVANLRTGKLVRIAGVEVGK 66
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + ++ + + L T A IR L G Y+ L +
Sbjct: 67 VTRISINPD--ATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPG 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT------TTIA 181
T R + ++ Q + + T + A
Sbjct: 125 HTIPLARTQPALDLDALIGGFKPLFRALNPEQVNALSEQLLHAFAGQGPTIGSLLAQSAA 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T++ I + +D + T + K V
Sbjct: 185 VTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISNAVAY 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
++ ++ + V + +D+LL+ K ++
Sbjct: 245 TNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMY 304
Query: 302 ENI 304
+
Sbjct: 305 GDF 307
>gi|186477283|ref|YP_001858753.1| hypothetical protein Bphy_2535 [Burkholderia phymatum STM815]
gi|184193742|gb|ACC71707.1| Mammalian cell entry related domain protein [Burkholderia phymatum
STM815]
Length = 544
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/454 (6%), Positives = 104/454 (22%), Gaps = 53/454 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-----------------IRIPGSVDG 51
+G VS L Y + + + S+
Sbjct: 125 RIGASGVSGLGTLLSGAYIGVDGGRSTETQTQFVGLESPPAVTVDQKGRQFTLRGESLGS 184
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S V + + VG++ G LD++ + P +
Sbjct: 185 IDIGSPVFYRRVQVGQVTGFSLDKDGTG---VTVQVFVSAP------------------F 223
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + T S + +
Sbjct: 224 DQYVGTNSRWWHASGVDVRLDSSGFKLNTQSLATVIVGGL-----AFQSPPGQAVGVQAP 278
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + + + + + + +I +
Sbjct: 279 NNMTFRLGSDEADAMREPDGDPVRVVMNFNQSLRGLSVGAPVDFRGIVLGQVINIGVEFD 338
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ ++ + + + R + G + + +
Sbjct: 339 PQTKNFNMPVTMDLYPDRLRRRSRGQPVPESGTEESRRMLLALVKHGLRGQLRTGNLLTG 398
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS-NLNDSSQKFA 350
F + + R I + + + + + + +
Sbjct: 399 QLYVAIDLFPKAPQATVDVSRDPIELPTIPNSLDELQLQIADIAKKLDQVPFDQIGKNLN 458
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ +++ + + + A+ + + T + +D+
Sbjct: 459 TALKNADHLFSQLD-KEVLPQARDTLAAAKQTFGSAEATLQQ--------DSPLQSDVHQ 509
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+++L T+ + + ER+P+ ++ G+
Sbjct: 510 ALQELTRTLQSLNALSDYLERHPESLLRGKSGDK 543
>gi|289446143|ref|ZP_06435887.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
gi|289749087|ref|ZP_06508465.1| MCE-family protein mce2b [Mycobacterium tuberculosis T92]
gi|289756669|ref|ZP_06516047.1| MCE-family protein mce2B [Mycobacterium tuberculosis T85]
gi|289419101|gb|EFD16302.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
gi|289689674|gb|EFD57103.1| MCE-family protein mce2b [Mycobacterium tuberculosis T92]
gi|289712233|gb|EFD76245.1| MCE-family protein mce2B [Mycobacterium tuberculosis T85]
Length = 355
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 83/297 (27%), Gaps = 9/297 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ +G+ + + F+ I + V GL VR
Sbjct: 13 MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVR--FHHTTGYSAVFTH-VSGLRAGQFVRA 69
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L + L + L +TTA+IR L G Y+EL
Sbjct: 70 AGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTASIRYLNLIGDRYLELGRGHSG 128
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAEN-----TSKKISDSSRHIQKIIENIEKP 175
++ + + F + + S Q I
Sbjct: 129 QRLAPGATIPLEHTHPALDLDALLGGFRPLFQTLDPDKVNSIASSIITVFQGQGATINDI 188
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L T + T++ ++ + T + +++ + K
Sbjct: 189 LDQTASLTATLADRDHAIGEVVNNLNTVLATTVKHQTEFDRTVDKLEVLITGLKNRADPL 248
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
I ++ + ++ + Q + ++DH+L
Sbjct: 249 AAAAAHISSAAGTLADLLGADRPLLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAY 305
>gi|108798497|ref|YP_638694.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867597|ref|YP_937549.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108768916|gb|ABG07638.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693686|gb|ABL90759.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 424
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 37/352 (10%), Positives = 97/352 (27%), Gaps = 14/352 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ +GL +L + L + + S +GL T VR
Sbjct: 1 MRNRT--LRIGLAFALVLVALAGGVVALRSMDHAGR--TTITAYFDNS-NGLFTGDEVRI 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + E + + A I + L ++L+
Sbjct: 56 LGVPVGAVETIEPQPE---RVKITFWVDDKYQVPADAKAVIVSPQLVTARAVQLTPAYSS 112
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS-----SRHIQKIIENIEKP 175
+ A R + + + N + + + +N+
Sbjct: 113 GPAMADGAVIPEDRTAVPLEWDDLRTQLEKLTNALQPTQPGGVSTLGQFVNTAADNLRGQ 172
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ ++ L+ H T + + + + + + +
Sbjct: 173 GANIRETVTAMAKALSALGDHSGDTFSTLKNLSVVVSALEDSSELLGQLNRNLATVTGLL 232
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-SSKMKS 294
+ + I + +++ + + T + ++ L D +
Sbjct: 233 ADDPDAVGNAINDLNAVVAQATQFLRDNREAAGIATDRLAAITTAVNGGLDDIKQALHAF 292
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ N+ + + + A+ + D Q I +I + + +
Sbjct: 293 PNAAQNFANVYQPSQAALTGMLAVNNLADPIQFICGSIEAASRVNAVYSSKL 344
>gi|218780628|ref|YP_002431946.1| mammalian cell entry related domain protein [Desulfatibacillum
alkenivorans AK-01]
gi|218762012|gb|ACL04478.1| Mammalian cell entry related domain protein [Desulfatibacillum
alkenivorans AK-01]
Length = 338
Score = 88.1 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/324 (13%), Positives = 112/324 (34%), Gaps = 6/324 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S VGLF+++ + + + W+ + Y ++ SV GL DS+V++
Sbjct: 1 MASVQTKFMVGLFLIAGVALTVVVVIWVG-MSGYLEKGVNYVMYFDESVQGLDQDSTVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P+G + + + + IR A +++ G+ GI +IEL
Sbjct: 60 RGVPIGSVQSIEVAADG-KLVEVVVKIRKGDIPEEPVFAQLKSVGITGIMFIELDL-EPV 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+I Q + +I SGIN N E + + + +
Sbjct: 118 PSSIKQEFSFETPYPVIPTRLSGINQMFRNVETMFSRFEQMDVEGVIVRLQRDLDSLDKV 177
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ + +D++ + + + ++ ++ +
Sbjct: 178 IKNTDTEAISSSIVESLDRLNNILDPERWDAILASVQQVGPEVEDTVGD--ARAMFNRAE 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
L + ++ ++ + + E + + G+ + D +
Sbjct: 236 SALGRLDGLLLQNQENLTLAMDALRETMEAAASMVKEGENLVAGTDD-KFSHLQQHLLVS 294
Query: 301 LENIADSTSNMRSSISAIREITDQ 324
++N+ +T N+ + ++ + Q
Sbjct: 295 VQNLEKATENLNRLLDSLAQDPAQ 318
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 18/176 (10%), Positives = 56/176 (31%), Gaps = 10/176 (5%)
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
DV Q +D ++ + ++ S L+ + + R + + +
Sbjct: 157 QMDVEGVIVRLQRDLDSLDKVIKNTDTEAISSSIVESLDRLNNILDPERWD-AILASVQQ 215
Query: 324 QRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTS 383
++ T+ + + + + L+ + + + M
Sbjct: 216 VGPEVEDTVGDARAMFNRAESALGRLDGLL-----LQNQENLTLAMDALRETMEAAASMV 270
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ + + + Q L +Q L++ + + L++ ++P I+ G
Sbjct: 271 KEGENLVAGTDDKFSHLQQHLLVSVQ----NLEKATENLNRLLDSLAQDPAQILLG 322
>gi|307297003|ref|ZP_07576819.1| Mammalian cell entry related domain protein [Sphingobium
chlorophenolicum L-1]
gi|306877529|gb|EFN08757.1| Mammalian cell entry related domain protein [Sphingobium
chlorophenolicum L-1]
Length = 320
Score = 87.7 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 56/287 (19%), Positives = 114/287 (39%), Gaps = 10/287 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ + VG + +L + +W SR +Q G E I SV+GL+ SSV +
Sbjct: 1 METRSNHVLVGTVTLLLLAAIMIAAFWFSRLSQ--GDNMEYDIFFKQSVNGLAKGSSVNY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+P G++ + L + P+ + ++ TP+ TTATI G G++ I L K
Sbjct: 59 SGVPSGQVEKIELWKRDPSFVKVRISVKEGTPVLQGTTATIAGVGFTGVSEIVLDGAVKG 118
Query: 121 KKTIFQIAT------ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
I A + T + + + + + + R + + + ++
Sbjct: 119 APPITCPAENPLASCPDGVPVIPTKPGALGELLNNAPQLLERLSTLTERLTELLNDKNQQ 178
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ +AN+E +S LA+ I + ++ + I L S D M+
Sbjct: 179 SIAGILANVERVSGALADRSPEIAATLAEARI--AVQRTGIAAEQIGKLAASTDAMVNDE 236
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++IQ ++ + + VR + ++
Sbjct: 237 GRPLLADLRKSIQSATRSIDTLDKTIGEAQPGVRAFSNQTMPEVNQL 283
>gi|220909178|ref|YP_002484489.1| Mammalian cell entry related domain-containing protein [Cyanothece
sp. PCC 7425]
gi|219865789|gb|ACL46128.1| Mammalian cell entry related domain protein [Cyanothece sp. PCC
7425]
Length = 404
Score = 87.7 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 50/399 (12%), Positives = 114/399 (28%), Gaps = 29/399 (7%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ SVGL +++ + + WL N + + + G+ S+VR
Sbjct: 1 MRSRTLREGSVGLLILAGIGLFGGLVLWLRGINP-GARSYRLQVEL-QDASGVDVGSAVR 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLR 118
F G+ VG + GL +A+ I + A G G +I+
Sbjct: 59 FRGVKVGSVTGLETATNS---VIAEVAINSGELLIPRQAIAETTQSGFIGQVFIDFRPPA 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ S ++
Sbjct: 116 T----LVSATLPEGLSPFPPNCDS-----------------SRVLCDGDRLKGQTGASFD 154
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ T L +N + I T + +T + +
Sbjct: 155 ELIRSTTAIAELLDNSNLIANANRTLLNADRTLTRFSTVAGELTTAARGVNQLTRTAQGE 214
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + + SD V + T GQ++ +S+ S + E S
Sbjct: 215 LKNFSVAANSVTQAANEVSDLVQANRGTIASTLTNLDASGQELRTAISNLSPFLSRLEKS 274
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
L N+ +N + + ++++T I+ + + + ++ + ++
Sbjct: 275 QLLANLETLAANGAKASANLKDLTTTLNNPIT-VLGLAQTLDAARTTFLNTQKITTDLDR 333
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
I+ + + +S+++ R + ++
Sbjct: 334 ITGDATFRANLIKLINGLSKLVSSSQELERQLQALETQT 372
>gi|294010009|ref|YP_003543469.1| ABC-type transport system periplasmic component LinM [Sphingobium
japonicum UT26S]
gi|139001580|dbj|BAF51700.1| putative periplasmic protein [Sphingobium japonicum]
gi|292673339|dbj|BAI94857.1| ABC-type transport system periplasmic component LinM [Sphingobium
japonicum UT26S]
Length = 320
Score = 87.7 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 57/287 (19%), Positives = 114/287 (39%), Gaps = 10/287 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+++ + VG + +L + +W SR +Q G E I SV+GL+ SSV +
Sbjct: 1 METRSNHVLVGTVTLLLLAAIMIAAFWFSRLSQ--GDNMEYDIFFKQSVNGLAKGSSVNY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+P G++ + L + P+ + ++ TP+ TTATI G G++ I L K
Sbjct: 59 SGVPSGQVEKIELWKRDPSFVKVRISVKEGTPVLQGTTATIAGVGFTGVSEIVLDGAVKG 118
Query: 121 KKTIFQIAT------ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
I A + T + + + + + + R + + + ++
Sbjct: 119 APPIVCPAENPLASCPDGVPVIPTKPGALGELLNNAPQLLERLSTLTERLTELLNDKNQQ 178
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ +AN+E IS LA+ I + ++ + I L S D M+
Sbjct: 179 SIAGILANVERISGSLADRSPEIAATLAEARI--AVQRTGIAAEQIGKLAASTDAMVNDE 236
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++IQ ++ + + VR + ++
Sbjct: 237 GRPLLADLRKSIQSATRSIDTLDKTIAEAQPGVRAFSNQTMPEVNQL 283
>gi|146305913|ref|YP_001186378.1| hypothetical protein Pmen_0878 [Pseudomonas mendocina ymp]
gi|145574114|gb|ABP83646.1| Mammalian cell entry related domain protein [Pseudomonas mendocina
ymp]
Length = 156
Score = 87.7 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLMAGVLALLLLALRVSGLSVGTSGDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSYMG-RVTLELDGSVNNLPEDSTASILTAGLLGEKYIGISVGGD 119
Query: 120 EKKTIFQIATERNQ 133
E+ Q
Sbjct: 120 EEVLKDGGTIHDTQ 133
>gi|41409707|ref|NP_962543.1| hypothetical protein MAP3609 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398539|gb|AAS06159.1| hypothetical protein MAP_3609 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 516
Score = 87.7 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/272 (11%), Positives = 85/272 (31%), Gaps = 4/272 (1%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V +++++ IY+L + + +P S GL ++V + GI +G++
Sbjct: 10 LVAFGILTVISLLVLGIYYLQIPSLVGIGRYTLKAELPAS-GGLYPTANVTYRGITIGKV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + A I + A + + G Y++L + K +
Sbjct: 69 TDVEPTEHG---AEATMSIDSHYKIPIDAVANVHSVSAVGEQYLDLVSSGNPGKYLSSGQ 125
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
T P+ A +KI + + + L + + I
Sbjct: 126 TITKGTVPAEIGPALDTANRGLAVLPKEKIGQLLDETAQSVGGLGPNLQRLVDATQAIVG 185
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
N I+ ++ ++ + S + A + + +L
Sbjct: 186 DFKNQITDVNDIIEHSGPVIDSQVKSGDAIERWARNLNRLGAQSAQEDSHLKSLLRQAAP 245
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+++ + V ++ + ++ ++
Sbjct: 246 TADQVNDVFNDVRESLPQTLANLEVVIDLLKR 277
>gi|149178240|ref|ZP_01856833.1| hypothetical protein PM8797T_16605 [Planctomyces maris DSM 8797]
gi|148842889|gb|EDL57259.1| hypothetical protein PM8797T_16605 [Planctomyces maris DSM 8797]
Length = 386
Score = 87.7 bits (214), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/378 (11%), Positives = 106/378 (28%), Gaps = 3/378 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLFV+S + I+ + + +R S+ G+ + V
Sbjct: 1 MTDRQIQFRVGLFVISAMITGAGMIFQFGQLETLWKKKYTIAMRF-ESISGVHQGTPVVR 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI +G + + + + + I L + I + + + + E
Sbjct: 60 HGIRIGEVDKI-ITSDSKTGVMLLVNISESQHLRKDASPQIVSSIMGDSKIVIEPGVSSE 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
R + + S + + + +E
Sbjct: 119 FLNPGDRLVGRESSDPMEIVYRMEQQVTKTLDAFSTTSKEWEKVASNMNRLMETKEGNLD 178
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
IE +T L + KM H + + ++ MI++ + +
Sbjct: 179 VVIERAATSLEEFSLAMRKMNQMMTSVNHLVADPVQQENLKRSMAAMPAMIESTQ-RTIA 237
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ +Q + N S + ++D +L++ +S ++
Sbjct: 238 SVEIAVQKAGQNLDNLSQVTDPLAKHSQSMVVKMDRSLTRLDAILAELNSFSRALNAGDG 297
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
S + +++ + I I S+ + + + S
Sbjct: 298 SLKKFISDPELYRNMNRSASSLTVLLNNLEPIARDIRIFSDKIARHPEVLGVSGAMKGSS 357
Query: 361 ALKENNSLFKDAQRAMHT 378
LKE + +
Sbjct: 358 GLKEAGDQPQQQPSRVRQ 375
>gi|167564039|ref|ZP_02356955.1| paraquat-inducible protein B [Burkholderia oklahomensis EO147]
Length = 551
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/411 (9%), Positives = 113/411 (27%), Gaps = 46/411 (11%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 177 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 230
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 231 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 272
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + S + T + + + ++ + +
Sbjct: 273 FQPPPNQSAGPPAPNNMTFRLGTDEGDAMREPDGEPVQVVMNFNQSLRGLSIGAPIDFRG 332
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + + + Q
Sbjct: 333 IVLGQVTNIGIDYDPKTKTFTMPVTMNVYPDRLGRKFREAAQNKGAAARREVLSRLVQHG 392
Query: 275 QEVGQKI-----DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ L K+ L+ + +++ ++ K +
Sbjct: 393 LRGQLRTGNLLTSQLYVALDFFPKAPPVKINLDREPVELPTVPNTLDELQLQVADIAKKL 452
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
+ + I +NLN + +L +++ + +A+ + + T
Sbjct: 453 DKVP-FDQIGTNLNSALANADKLFKRLD--------TEVAPEARDTLSAAKQTFTTAEAT 503
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 504 LQQ--------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 546
>gi|255034003|ref|YP_003084624.1| Mammalian cell entry related domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254946759|gb|ACT91459.1| Mammalian cell entry related domain protein [Dyadobacter fermentans
DSM 18053]
Length = 337
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/338 (11%), Positives = 99/338 (29%), Gaps = 4/338 (1%)
Query: 1 MESKNYY-TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + +VGLFV+ + I + + V V+GL +++
Sbjct: 1 MATSTKRSVNVGLFVIIGILIFVVGILTIGSMKKVFSSTITVKTIF-DDVNGLKIGNNIW 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
++G+ +G + + + + + + A + T GL G I + +
Sbjct: 60 YSGVKIGTVKSIRFLDNSKVEVMLNIEEKSQEFIRKNAKAKVSTDGLIGNKIIVIYGGTQ 119
Query: 120 EKKTIFQIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ +I + + ++ N + S++I + L
Sbjct: 120 KVPSIEDGDELLVEKIESTEEMLAVLSENNKNLLGITSAFKTISKNILAGKGTVGMLLND 179
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK-AIDLQ 237
+ T+ A + ++ T + S+ D T M +
Sbjct: 180 ERLYNDLDQTLGAMKKASVNAQSLTASLAGFSAKLNEKGGLANDFATDTVIMKDLRSSIA 239
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++N+ + + V NN +S + + + + L + S + +
Sbjct: 240 RLNETVSSANVMVNNLKTASADLNSNKTSPLGVLLHDEATASNLKETLKNLESTTEKLDE 299
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
+ + ++++ N
Sbjct: 300 NMTALRSNFLFRRYFRKKEKEQAKQPAKEEVKEQENQQ 337
>gi|169631589|ref|YP_001705238.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243556|emb|CAM64584.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 355
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 55/178 (30%), Gaps = 5/178 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +GL V + + + + + + G V GL VR
Sbjct: 1 MRFRGP--LIGLTVFMTVALTLGWLVYATLLREVSGSTTAYSAIFTD-VYGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L + +++ D LY +T A++ Q + G Y+ LS +
Sbjct: 58 AGVRVGRVQKIELVDN--ERARVDFVVQNDQKLYGNTIASVTYQNIVGQRYVGLSPGKSG 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + PS + N + I+
Sbjct: 116 GPAGDTVLAAGATIPVERTDPSFDVTTLLNGYEPLFSTLSPEQADNLTKGVIQSLQGD 173
>gi|254777449|ref|ZP_05218965.1| hypothetical protein MaviaA2_22661 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 516
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 32/272 (11%), Positives = 85/272 (31%), Gaps = 4/272 (1%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V +++++ IY+L + + +P S GL ++V + GI +G++
Sbjct: 10 LVAFGILTVISLLVLGIYYLQIPSLVGIGRYTLKAELPAS-GGLYPTANVTYRGITIGKV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + A I + A + + G Y++L + K +
Sbjct: 69 TDVEPTEHG---AEATMSIDSHYKIPIDAVANVHSVSAVGEQYLDLVSSGNPGKYLSSGQ 125
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
T P+ A +KI + + + L + + I
Sbjct: 126 TITKGTVPAEIGPALDTANRGLAVLPKEKIGQLLDETAQSVGGLGPNLQRLVDATQAIVG 185
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
N I+ ++ ++ + S + A + + +L
Sbjct: 186 DFKNQITDVNDIIEHSGPVIDSQVKSGDAIERWARNLNRLGAQSAQEDSHLKSLLRQAGP 245
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+++ + V ++ + ++ ++
Sbjct: 246 TADQVNDVFNDVRESLPQTLANLEVVIDLLKR 277
>gi|167620666|ref|ZP_02389297.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis Bt4]
Length = 168
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|167582552|ref|ZP_02375426.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis TXDOH]
Length = 168
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|170703509|ref|ZP_02894269.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
IOP40-10]
gi|170131584|gb|EDT00152.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
IOP40-10]
Length = 539
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/407 (7%), Positives = 103/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + + T S +
Sbjct: 219 ----------------YDQYVGVNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + ++ + + +
Sbjct: 260 ---AFQTPPNQGTGATAPNNTTFRLGSDEADAMRDPDGQPLQVVMNFNQSLRGLGVGAPV 316
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +T++ + + N+ R+ +
Sbjct: 317 DFRGIVLGEVTNIGIDYDPKTKNFLMPVTMNVYPERLGRRFRETIESQGEPARRDIVERL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + + R + + + +
Sbjct: 377 VKHGLRGQLRTGNLLTSQLYVALDFFPKAPPATIDTTRQPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + +S + + + + A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALSNADKLFKQLDTQ-IAPQARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 534
>gi|144898204|emb|CAM75068.1| ABC transporter substrate binding protein [Magnetospirillum
gryphiswaldense MSR-1]
Length = 170
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 4/152 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M T +G V+++ F + + + G + G + GL + + VR
Sbjct: 1 MGRNLIETIMGAVVLAVAGFFLVFAWRHAGMEEVKG--YTLTAHFAG-IGGLDSGADVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + LD N + I D L TTATI +GL G YI+L R +
Sbjct: 58 NGIKVGTVASQSLDPVSYN-AGVTLTIAQDIRLPADTTATIAAEGLLGGKYIKLIPGRAK 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + + G F++ A+
Sbjct: 117 DRLPDGGQLAKTKDYKSIEEMVGELIFLATAD 148
>gi|319903132|ref|YP_004162860.1| Mammalian cell entry related domain protein [Bacteroides helcogenes
P 36-108]
gi|319418163|gb|ADV45274.1| Mammalian cell entry related domain protein [Bacteroides helcogenes
P 36-108]
Length = 297
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/290 (14%), Positives = 92/290 (31%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ ++ L + I +L N + + +++GL+ S V
Sbjct: 1 MKYITKEVRIGIAGIAALCILVYGINYLKGINMFKPSSYFYVK--FQNINGLTKSSPVFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D P +A+ + PD + +TA + + L G+ L
Sbjct: 59 DGFRVGIVRDLYYDYTQPGKVVAEIDVNPDLRIPKGSTAELTAEMLGGVKMNLLLANNPR 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + + + + + + + P
Sbjct: 119 EKYQI------GDTIPGILNNGMMEKVANMMPQVERMLPKLDSILASLNTVLSDPSIPAT 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + + + + + + + +L K+ A +QKV+
Sbjct: 173 LRNVQNMTADMAVSTRQLQTLMKNDIPQLTGKLNAIGDNFVLISGNLKKINYAAAMQKVD 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L NI++ ++ + V ++D LL D S
Sbjct: 233 STLANIKIITDKLNSKDNTVGLLLNDP-ALYNNLNTTTVNAASLLEDLKS 281
>gi|156975890|ref|YP_001446797.1| hypothetical protein VIBHAR_03656 [Vibrio harveyi ATCC BAA-1116]
gi|156527484|gb|ABU72570.1| hypothetical protein VIBHAR_03656 [Vibrio harveyi ATCC BAA-1116]
Length = 165
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 48/134 (35%), Gaps = 4/134 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG F+++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKTELWVGSFLLAGICAILVMIFQVADVKSIGSGNTYTLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL--RK 119
+ +GR+ + L+ + I +++ I T GL G YI L
Sbjct: 64 VVIGRVSSITLNPDSLLPV-VSLSINSQYNQFPETSSVQILTSGLIGEQYIGLVPGFVFD 122
Query: 120 EKKTIFQIATERNQ 133
+++ + T +
Sbjct: 123 DEEMLVDGDTIEDT 136
>gi|83719153|ref|YP_443506.1| ABC transporter periplasmic substrate-binding protein [Burkholderia
thailandensis E264]
gi|257137709|ref|ZP_05585971.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis E264]
gi|83652978|gb|ABC37041.1| ABC transporter, periplasmic substrate-binding protein
[Burkholderia thailandensis E264]
Length = 176
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 1/122 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFVV F + + + ++ GL ++V+
Sbjct: 3 MKKTALDFWVGLFVVLGFLALLFLALKVGNMSSLSFQPTYAVKMKFDNIGGLKPRAAVKS 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D +L + ++A I T GL G YI L
Sbjct: 63 AGVVVGRVKTIGFDTNTY-QALVTIDLDKQYQFPKDSSAKILTSGLLGEQYIGLDPGGDT 121
Query: 121 KK 122
+
Sbjct: 122 EM 123
>gi|15607311|ref|NP_214684.1| MCE-family protein MCE1B [Mycobacterium tuberculosis H37Rv]
gi|15839548|ref|NP_334585.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|148659934|ref|YP_001281457.1| MCE-family protein Mce1B [Mycobacterium tuberculosis H37Ra]
gi|148821362|ref|YP_001286116.1| MCE-family protein mce1B [Mycobacterium tuberculosis F11]
gi|167970291|ref|ZP_02552568.1| MCE-family protein mce1B [Mycobacterium tuberculosis H37Ra]
gi|215406163|ref|ZP_03418344.1| MCE-family protein mce1B [Mycobacterium tuberculosis 02_1987]
gi|215433090|ref|ZP_03431009.1| MCE-family protein mce1B [Mycobacterium tuberculosis EAS054]
gi|215448449|ref|ZP_03435201.1| MCE-family protein mce1B [Mycobacterium tuberculosis T85]
gi|218755904|ref|ZP_03534700.1| MCE-family protein mce1B [Mycobacterium tuberculosis GM 1503]
gi|253797092|ref|YP_003030093.1| MCE-family protein mce1B [Mycobacterium tuberculosis KZN 1435]
gi|254233559|ref|ZP_04926885.1| MCE-family protein mce1B [Mycobacterium tuberculosis C]
gi|254366622|ref|ZP_04982666.1| MCE-family protein mce1B [Mycobacterium tuberculosis str. Haarlem]
gi|254549109|ref|ZP_05139556.1| MCE-family protein mce1B [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289552422|ref|ZP_06441632.1| MCE-family protein mce1B [Mycobacterium tuberculosis KZN 605]
gi|289747937|ref|ZP_06507315.1| MCE-family protein mce1b [Mycobacterium tuberculosis 02_1987]
gi|289756235|ref|ZP_06515613.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289760272|ref|ZP_06519650.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289764286|ref|ZP_06523664.1| MCE-family protein mce1B [Mycobacterium tuberculosis GM 1503]
gi|297632648|ref|ZP_06950428.1| MCE-family protein mce1B [Mycobacterium tuberculosis KZN 4207]
gi|297729623|ref|ZP_06958741.1| MCE-family protein mce1B [Mycobacterium tuberculosis KZN R506]
gi|306774260|ref|ZP_07412597.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu001]
gi|306779004|ref|ZP_07417341.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu002]
gi|306782792|ref|ZP_07421114.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu003]
gi|306787159|ref|ZP_07425481.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu004]
gi|306791715|ref|ZP_07430017.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu005]
gi|306795759|ref|ZP_07434061.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu006]
gi|306801755|ref|ZP_07438423.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu008]
gi|306805966|ref|ZP_07442634.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu007]
gi|306970362|ref|ZP_07483023.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu009]
gi|306974594|ref|ZP_07487255.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu010]
gi|307082303|ref|ZP_07491473.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu011]
gi|307082647|ref|ZP_07491760.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu012]
gi|313656949|ref|ZP_07813829.1| MCE-family protein mce1B [Mycobacterium tuberculosis KZN V2475]
gi|2213507|emb|CAB09753.1| MCE-FAMILY PROTEIN MCE1B [Mycobacterium tuberculosis H37Rv]
gi|13879660|gb|AAK44399.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|124603352|gb|EAY61627.1| MCE-family protein mce1B [Mycobacterium tuberculosis C]
gi|134152134|gb|EBA44179.1| MCE-family protein mce1B [Mycobacterium tuberculosis str. Haarlem]
gi|148504086|gb|ABQ71895.1| MCE-family protein Mce1B [Mycobacterium tuberculosis H37Ra]
gi|148719889|gb|ABR04514.1| MCE-family protein mce1B [Mycobacterium tuberculosis F11]
gi|253318595|gb|ACT23198.1| MCE-family protein mce1B [Mycobacterium tuberculosis KZN 1435]
gi|289437054|gb|EFD19547.1| MCE-family protein mce1B [Mycobacterium tuberculosis KZN 605]
gi|289688465|gb|EFD55953.1| MCE-family protein mce1b [Mycobacterium tuberculosis 02_1987]
gi|289696822|gb|EFD64251.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289711792|gb|EFD75808.1| MCE-family protein mce1B [Mycobacterium tuberculosis GM 1503]
gi|289715836|gb|EFD79848.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|308217094|gb|EFO76493.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu001]
gi|308328032|gb|EFP16883.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu002]
gi|308332312|gb|EFP21163.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu003]
gi|308336194|gb|EFP25045.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu004]
gi|308339694|gb|EFP28545.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu005]
gi|308343701|gb|EFP32552.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu006]
gi|308347574|gb|EFP36425.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu007]
gi|308351473|gb|EFP40324.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu008]
gi|308352200|gb|EFP41051.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu009]
gi|308356149|gb|EFP45000.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu010]
gi|308360104|gb|EFP48955.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu011]
gi|308367652|gb|EFP56503.1| MCE-family protein mce1B [Mycobacterium tuberculosis SUMu012]
gi|323717159|gb|EGB26368.1| MCE-family protein mce1B [Mycobacterium tuberculosis CDC1551A]
gi|328456879|gb|AEB02302.1| MCE-family protein mce1B [Mycobacterium tuberculosis KZN 4207]
gi|328864222|gb|AEB53194.1| MCE family protein 1B [Mycobacterium tuberculosis]
Length = 346
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ V +LFF+ I + +V GL VR
Sbjct: 1 MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAE---FSNVSGLRQGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ +G++ L L + + I PLY STTA IR L G Y+EL
Sbjct: 58 SGVEIGKVKALHLV-DGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEG 115
>gi|167571185|ref|ZP_02364059.1| paraquat-inducible protein B [Burkholderia oklahomensis C6786]
Length = 551
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/411 (9%), Positives = 112/411 (27%), Gaps = 46/411 (11%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 177 DQKGTQYVLR-GDSLGSIDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 230
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + T S +
Sbjct: 231 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIA-- 272
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + S + T + + + ++ + V
Sbjct: 273 FQPPPNQSAGPPAPNNMTFRLGTDEGDAMREPDGEPVQVVMNFNQSLRGLSVGAPIDFRG 332
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+T++ D K + + + + Q
Sbjct: 333 IVLGQVTNIGIDYDPKTKTFTMPVTMNVYPDRLGRKFREAAQDKGAAARREVLSRLVQHG 392
Query: 275 QEVGQKI-----DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ L K+ L+ + +++ ++ K +
Sbjct: 393 LRGQLRTGNLLTSQLYVALDFFPKAPPVKINLDREPVELPTVPNTLDELQLQVADIAKKL 452
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
+ + I +NLN + +L +++ + +A+ + + T
Sbjct: 453 DKVP-FDQIGTNLNSALANADKLFKRLD--------TEVAPEARDTLSAAKQTFTTAEAT 503
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 504 LQQ--------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 546
>gi|119714952|ref|YP_921917.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119535613|gb|ABL80230.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 321
Score = 87.7 bits (214), Expect = 4e-15, Method: Composition-based stats.
Identities = 30/284 (10%), Positives = 84/284 (29%), Gaps = 8/284 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
VG + +L + + G GL + VR G+ V
Sbjct: 8 NPVIVGAVSLVVLALVMLAAFRAQDLPLIGGGDTYYAA--FSEAGGLEPNDEVRIAGVRV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + L+ + H + + T A I+ + L G Y+ L +
Sbjct: 66 GKVESVELEGD---HVRVTFRVDTASEFGDDTHAAIKVKTLLGAMYLALQPAGAGQLDEG 122
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + ++ + ++++S + + N + + +
Sbjct: 123 AEIPVERTSSPYDVVDAFAGLAKTSERIDTDRLAESLTTLADLSRNTPEEFRQALDGVSR 182
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S+ +A I+ ++ + + ++ + + V+ +L +
Sbjct: 183 LSSNIAARDQQINSLLTNLKRVTGVLNERDDDIIGLMKDSDVLFRALVARRDAVHNLLVS 242
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
S + + D++ + V ++ +
Sbjct: 243 TTRLSKELTAL---IEQSRADLKPALTHLENVLAVLNKNEDNLD 283
>gi|260199173|ref|ZP_05766664.1| MCE-family protein mce1B [Mycobacterium tuberculosis T46]
gi|289441545|ref|ZP_06431289.1| MCE-family protein mce1B [Mycobacterium tuberculosis T46]
gi|289414464|gb|EFD11704.1| MCE-family protein mce1B [Mycobacterium tuberculosis T46]
Length = 346
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 46/119 (38%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ V +LFF+ I + +V GL VR
Sbjct: 1 MKITGTVVKLGIVSVVLLFFTVMIIVIFGQMRFDRTNGYTAE---FSNVSGLRQGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ +G++ L L + + I PLY STTA IR L G Y+EL
Sbjct: 58 SGVEIGKVKALHLV-DGGRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEG 115
>gi|27364140|ref|NP_759668.1| ABC transporter periplasmic component YrbD [Vibrio vulnificus
CMCP6]
gi|37678641|ref|NP_933250.1| ABC-type transport system, periplasmic component [Vibrio vulnificus
YJ016]
gi|320157525|ref|YP_004189904.1| ABC transporter periplasmic protein YrbD [Vibrio vulnificus
MO6-24/O]
gi|27360258|gb|AAO09195.1| Uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
vulnificus CMCP6]
gi|37197381|dbj|BAC93221.1| ABC-type transport system, periplasmic component [Vibrio vulnificus
YJ016]
gi|319932837|gb|ADV87701.1| uncharacterized ABC transporter periplasmic component YrbD [Vibrio
vulnificus MO6-24/O]
Length = 162
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 2/129 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKTELWVGSFVLAGICAILVMIFQVADVKGLGSGNTYTLKAQFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +GR+ + L+ E I +++ I T GL G YI L +
Sbjct: 64 VVIGRVSDISLNPETLVPV-VSLSINSLYNQFPETSSVQILTSGLIGEQYIGLVPGFVFE 122
Query: 122 KTIFQIATE 130
+
Sbjct: 123 DEQMLKDGD 131
>gi|269960374|ref|ZP_06174748.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269834985|gb|EEZ89070.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 165
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKTELWVGSFVLAGICAILVMIFQVADVKSIGSGNTYTLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +GR+ + L+ + I +++ I T GL G YI L
Sbjct: 64 VVIGRVSNITLNPDSLLPV-VSLSINSQYNQFPETSSVQILTSGLIGEQYIGLVPGFVFD 122
Query: 122 KTIFQIATER 131
+ +
Sbjct: 123 DEEMLVDGDT 132
>gi|154253734|ref|YP_001414558.1| hypothetical protein Plav_3296 [Parvibaculum lavamentivorans DS-1]
gi|154157684|gb|ABS64901.1| Mammalian cell entry related domain protein [Parvibaculum
lavamentivorans DS-1]
Length = 164
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S T +G + + + F Y S S V G +DGL+ + VR
Sbjct: 1 MQSNLVETLIG--TLVVAVAAVFLFYGYSASGMRGSAGYHVNAAFSG-IDGLANGADVRV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG +V LD E ++ I + L ++A I ++GL G +YI ++ E
Sbjct: 58 SGIKVGTVVRQNLDPETF-QAVVTLDIAQNVKLPDDSSAKITSEGLLGGSYISVTPGGSE 116
Query: 121 KKTIFQIAT 129
+
Sbjct: 117 EYLADGGEI 125
>gi|110639358|ref|YP_679567.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
gi|110282039|gb|ABG60225.1| ABC transporter, permease component [Cytophaga hutchinsonii ATCC
33406]
Length = 325
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 78/296 (26%), Gaps = 8/296 (2%)
Query: 1 MESKNYY--TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ VG+FV+ + I + + +V V+GL S++
Sbjct: 1 MKESPNKRAVIVGMFVLIGILILLAGILTVGNLHTTFTKKMKVTAVF-DDVNGLLPGSNI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
F+G+ +G + L + + I + GL G + +
Sbjct: 60 WFSGVKIGTVKTLDFYGKSNVKVEMNIDQASQQYIRKDAMVKIGSDGLIGNKILIIYGGT 119
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ E + S + +N +S ++ ++ T
Sbjct: 120 -----VEAGQVEPGDSLRVATVLSTEEVMNTLQQNNKNILSITNDFKVISKRFVDGQGTL 174
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N + + + + T + D + + +
Sbjct: 175 GKLMTDESVFNNINATTESLQQASVKAQRLMADLAGFTSKLDDEGTLMNDLVTDTVVFES 234
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + +Q S + + + D T +L + S
Sbjct: 235 MRTTMAELQQVSASANALVNNLKKASADSTSTLGVLIHDDASGKNLKGTLQNLESS 290
>gi|114776718|ref|ZP_01451761.1| mce-related protein [Mariprofundus ferrooxydans PV-1]
gi|114552804|gb|EAU55235.1| mce-related protein [Mariprofundus ferrooxydans PV-1]
Length = 142
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 44/124 (35%), Gaps = 3/124 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VG+FV + + L + ++ V G+ + G+ +GRI
Sbjct: 3 VGVFVFLGILAIGWMALKLGQVGGLGESGYTLVANF-DDVGGMRKGGDIMMAGVIIGRID 61
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L + H+ I + A++RT+G+ G Y+ ++ E
Sbjct: 62 AVHLVKND--HAQMVLRINNGVKITEDAYASVRTKGIIGDRYLRITQGPSETYLKPGSEI 119
Query: 130 ERNQ 133
E +
Sbjct: 120 EETE 123
>gi|78065275|ref|YP_368044.1| hypothetical protein Bcep18194_A3799 [Burkholderia sp. 383]
gi|77966020|gb|ABB07400.1| Mammalian cell entry related-protein [Burkholderia sp. 383]
Length = 539
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 33/407 (8%), Positives = 105/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + + T S +
Sbjct: 219 ----------------YDQYVGVNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + ++ + + + +
Sbjct: 260 ---AFQTPPNQGSGTTAPNNTTFRLASDEGDAMRDPDGQPLQVVMNFNQSLRGLAVGATV 316
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +T++ + + N+ RE +
Sbjct: 317 DFRGIVLGEVTNIGIDFDPKTKNFLMPVTMNVYPERLGRRFRETIESKGEPARREIVERL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + A R + + + +
Sbjct: 377 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPAVKIDTARQPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + +S + + + + +A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALSNADKLFKQLDTQ-VAPEARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 534
>gi|159043940|ref|YP_001532734.1| hypothetical protein Dshi_1391 [Dinoroseobacter shibae DFL 12]
gi|157911700|gb|ABV93133.1| mammalian cell entry related domain protein [Dinoroseobacter shibae
DFL 12]
Length = 148
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 46/133 (34%), Gaps = 3/133 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG V++ + + + G + S DG++ + VR
Sbjct: 1 MSHSKTEVVVGGAVLAAAVGFLLFVSNATGFSG-GGSGYPLTASF-RSADGITIGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + G+ L+ E + + + + + ++ ++GL G +IE+
Sbjct: 59 AGVKIGTVTGIALNPETFR-ADTTISVSENIEIPDDSAISVSSEGLLGGNFIEILPGGSP 117
Query: 121 KKTIFQIATERNQ 133
Q
Sbjct: 118 FAMETGGEFIDTQ 130
>gi|261868148|ref|YP_003256070.1| ABC transporter periplasmic protein [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261413480|gb|ACX82851.1| conserved ABC-type transport system protein, periplasmic component
[Aggregatibacter actinomycetemcomitans D11S-1]
Length = 169
Score = 87.3 bits (213), Expect = 4e-15, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGIGSLIFLGLKVANVQGFSEAKSYHVYATFDNIGGLKVRAPLKVGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
R+ + LD + I + + +++ +I+T GL G YI LS + +
Sbjct: 68 RVSEITLDPQTY-LPKVTIAINQEYNEIPETSSLSIKTSGLLGEQYIALSIGFNDGEIAM 126
Query: 126 QIATER 131
++
Sbjct: 127 LKDGDK 132
>gi|134294784|ref|YP_001118519.1| hypothetical protein Bcep1808_0672 [Burkholderia vietnamiensis G4]
gi|134137941|gb|ABO53684.1| Mammalian cell entry related domain protein [Burkholderia
vietnamiensis G4]
Length = 539
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 32/407 (7%), Positives = 104/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + + T S +
Sbjct: 219 ----------------YDQYVGMNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + ++ + + +
Sbjct: 260 ---AFQTPPNQRTGATAPNNTTFRLGSDEGDAMRDPDGEPLQVVMNFNQSLRGLAVGAPV 316
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +T++ + + N+ RE +
Sbjct: 317 DFRGIVLGEVTNIGIDFDPKTKNFLMPVTMNVYPERLGPRFRETIGNKGESARREIVERL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
G + + + F + A R + + + +
Sbjct: 377 VRHGLRGQLRTGNLLTSQLYVALDFFPKAAAVKMDTTRQPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALTNADKLFKQLDTQ-VAPEARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 534
>gi|68249642|ref|YP_248754.1| ABC transporter periplasmic protein [Haemophilus influenzae
86-028NP]
gi|145627950|ref|ZP_01783751.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 22.1-21]
gi|145630176|ref|ZP_01785958.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae R3021]
gi|145638101|ref|ZP_01793711.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae PittII]
gi|148826301|ref|YP_001291054.1| ABC transporter periplasmic protein [Haemophilus influenzae PittEE]
gi|148828247|ref|YP_001293000.1| ABC transporter periplasmic protein [Haemophilus influenzae PittGG]
gi|260581862|ref|ZP_05849658.1| ABC-type transport system [Haemophilus influenzae NT127]
gi|68057841|gb|AAX88094.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 86-028NP]
gi|144979725|gb|EDJ89384.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 22.1-21]
gi|144984457|gb|EDJ91880.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae R3021]
gi|145272430|gb|EDK12337.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae PittII]
gi|148716461|gb|ABQ98671.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae PittEE]
gi|148719489|gb|ABR00617.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae PittGG]
gi|260095055|gb|EEW78947.1| ABC-type transport system [Haemophilus influenzae NT127]
gi|301169826|emb|CBW29430.1| predicted ABC-type organic solvent transporter [Haemophilus
influenzae 10810]
gi|309751267|gb|ADO81251.1| Phospholipid ABC transporter, periplasmic-binding component
[Haemophilus influenzae R2866]
gi|309973444|gb|ADO96645.1| Phospholipid ABC transporter, periplasmic-binding component
[Haemophilus influenzae R2846]
Length = 166
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 54/131 (41%), Gaps = 4/131 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + I ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGIGALVFLGLRVANVQGFAETKSYTVTAIFNNIGGLKVRAPLKIGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK--EKKT 123
R+ + LD++ I + + +++ +I+T GL G YI L+ +
Sbjct: 68 RVSAITLDEKSY-LPKVSIAINQEYNEIPENSSLSIKTSGLLGEQYIALTIGFDDGDTAM 126
Query: 124 IFQIATERNQR 134
+ + ++
Sbjct: 127 LKNGSQIQDTT 137
>gi|300769918|ref|ZP_07079797.1| ABC superfamily ATP binding cassette transporter, permease protein
[Sphingobacterium spiritivorum ATCC 33861]
gi|300762394|gb|EFK59211.1| ABC superfamily ATP binding cassette transporter, permease protein
[Sphingobacterium spiritivorum ATCC 33861]
Length = 315
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 89/291 (30%), Gaps = 5/291 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T VG + + F +L ++ + + G+VDGL+ V NG
Sbjct: 4 ANETKVGALTIVAIALLFIGYSFLKGNDVFSSENTFYTVY--GNVDGLAVSKPVMVNGYQ 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+GR+ + L + + I+ + + +T A I + L G I +
Sbjct: 62 IGRVSKMTLMPD--GQIRTEFKIKKEYEIPSNTVARIMSADLLGSKIIVFNLGNSTTLAN 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + + N + + I + + ++
Sbjct: 120 DGDPLTSDVQQNLMEKVEPLQKKVENIAARMDSVLVAVNAILDKDFQKDVKRSVHSISVT 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + ++ ++ ++ + LD ++ +D
Sbjct: 180 MKNIEGITGEVNGLLGTEKARLGRIMANLESITVNFKNNGKKLDHIMNNLDNVSDQMAKI 239
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
I+ + + ++ V + + + + D L ++ +S +
Sbjct: 240 EIKSTVDKANQAMQDVQEITNKINNGDGSISLLLND-DKLYNNLNSASEEL 289
>gi|291298694|ref|YP_003509972.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
gi|290567914|gb|ADD40879.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
Length = 356
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/301 (14%), Positives = 93/301 (30%), Gaps = 10/301 (3%)
Query: 1 MESKNYYT------SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLST 54
M ++ T +G+F V L + + GL
Sbjct: 1 MARRSGPTTFGSGLKLGVFAVITSLALVLLTDALGGVSLPGAAGYT---AMFEDATGLLP 57
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
VR G VG + + L+Q + + D + S ATIR + + G YI L
Sbjct: 58 GDEVRIAGAKVGEVDDVELEQGNKPLAKVTFDLDEDRDIPESVHATIRYRNMVGQRYIAL 117
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + + + + +P+ + N S + + I +
Sbjct: 118 TQAADGESPSAKNLEPGDVIGVRQTSPALDLTVLLNGFKPLFAA-LSPDEVNSLSYEIIQ 176
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
L + +E++ + A+ S + + T + + + D
Sbjct: 177 TLQGEGSTVESLLSHTASLTSTLAENDETIGKVITNLNDILSTVADRDEELDTSIGRLQE 236
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ +++ E + + ++ + Q V D R ++ L D S+ ++
Sbjct: 237 FVSGLSEDREALGEAVSSIGTLTTQTSQLVTDARPALDADISALDELSTTLLDNSATIED 296
Query: 295 K 295
Sbjct: 297 A 297
>gi|311741981|ref|ZP_07715791.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311314474|gb|EFQ84381.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 435
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 44/131 (33%), Gaps = 3/131 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ + +F + F + + G I V GL + V +
Sbjct: 1 MLTRRIKAQLIIFALLGGSALVFVTLVYGDTPRSTGVTHTSIDIEFDDVSGLYPRALVSY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ L + L K + + +T A I++ G +I+L +
Sbjct: 61 RGVKVGQVDSLDFRDDG---VLVKVYLEKGIRVPEATRAQIKSTSAIGEQFIDLLPENDD 117
Query: 121 KKTIFQIATER 131
+ T
Sbjct: 118 GPYLAGGDTIP 128
>gi|163745209|ref|ZP_02152569.1| paraquat-inducible protein B, putative [Oceanibulbus indolifex
HEL-45]
gi|161382027|gb|EDQ06436.1| paraquat-inducible protein B, putative [Oceanibulbus indolifex
HEL-45]
Length = 694
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/409 (11%), Positives = 140/409 (34%), Gaps = 23/409 (5%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ ++ GL + V +G+ +G + L L D+ + + +I+
Sbjct: 298 VVFDDNISGLIVGAPVEMSGLEIGEVETLS--------GLVDFERFGDSRVRLNAILSIQ 349
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
L G+ + + R + A + G+ + E+ + + +
Sbjct: 350 PAHL-GLQGDVTADAALAFLSERVEDGLRARLASASLLTGGLKVEMVMVEDAPEASLNET 408
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+ ++ E ++ A +E + T + + I++++ + +S+++ + + +
Sbjct: 409 DNNLALMPTTESDVSDAAATVEGVFTRINSL--PIEELLSSAISFLNSAEAFVSDEDLRE 466
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ ++ + ++ ++N+ V+ N + +Q++ + + R + +
Sbjct: 467 TPQDVRALLGELTGLVSSEEVKNVPVALNGTLVRIEQLVAKLEEER-VVERLSTALESAS 525
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT--S 340
S SS ++ + + + +T+ + + I T + +
Sbjct: 526 EAASSVSSSVEGVPELVESIQAVAAKAETLEVEELVVALTELTESADAVIGTDDAVALPG 585
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
L + + + ++ A++ N A+ A ++ + + + +
Sbjct: 586 ALKRALDEVNATLEELREGGAIENVNRTLASARNAADNIAVSARDLPQVVARLTALFAQA 645
Query: 401 SQ---------SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
S + +R +Q+ ERNP ++ GR
Sbjct: 646 SSTIEGYNKGEQLSRSAERTLRDIQKAAEALASLARTIERNPNSLLLGR 694
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 40/421 (9%), Positives = 107/421 (25%), Gaps = 11/421 (2%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIV 69
G V+ I+ + Y +++ G+S + +RF + VG +
Sbjct: 20 GASVIWIIPILALIVALFVAYRSYAERGPLIVVEFEAGA-GISAGETELRFRDVTVGVVE 78
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ + A I D Y + A + +
Sbjct: 79 KVGFTSD-LEKVTAHIRIDKDVAPYIDSGAVFWVVQPEVTAQGITGLSTVLSGVYIEGSW 137
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
++ + +I+ S ++ +N+ + +
Sbjct: 138 DQQVGPPAQRFQGSSTQPLIRGGQNGLEIAFRSTANGQLTDNVPILYKGIEVGRVGYAKI 197
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
I + + + ++S + I ++
Sbjct: 198 APRGNFAIVEALIFEEHRQLINESTRFW--------DASGFSVNIGPAGAEIDFSSLATL 249
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
V V T + + + + S K + F +NI+
Sbjct: 250 VGGGVTFDTFVSGGAQVSDGTVFEIYPDKETARNSVFNASEVDPLKMSVVFDDNISGLIV 309
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLF 369
+S + + + + LN + +++A L
Sbjct: 310 GAPVEMSGLEIGEVETLSGLVDFERFGDSRVRLNAILSIQPAHLGLQGDVTADAALAFLS 369
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
+ + + ++ + + +++ ++ LN+ N + + T + D
Sbjct: 370 ERVEDGLRARLASASLLTGGLKVEMVMVEDAPEASLNETDNNLALMPTTESDVSDAAATV 429
Query: 430 E 430
E
Sbjct: 430 E 430
>gi|226361935|ref|YP_002779713.1| Mce family protein [Rhodococcus opacus B4]
gi|226240420|dbj|BAH50768.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 340
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 5/134 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T + +F + ++ F+ + + + V GL + VR
Sbjct: 1 MKISATATKLAIFSIVMVLFTAAVVIVFGQFRFGSERQYSAV---FDDVSGLRDNEFVRV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + + ++ ++ + + PL ST A ++ L G Y+EL
Sbjct: 58 AGVEVGKVTSVDVREDST--AMVTFTLTKNVPLTESTRAAVKFSNLIGDHYLELVEGSGP 115
Query: 121 KKTIFQIATERNQR 134
+ + T +R
Sbjct: 116 LTPLGEGDTIPVER 129
>gi|319776662|ref|YP_004139150.1| ABC transporter periplasmic protein [Haemophilus influenzae F3047]
gi|319897435|ref|YP_004135632.1| abc-type transport system protein, periplasmic component
[Haemophilus influenzae F3031]
gi|329124180|ref|ZP_08252727.1| toluene tolerance efflux ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
gi|317432941|emb|CBY81308.1| conserved ABC-type transport system protein,periplasmic component
[Haemophilus influenzae F3031]
gi|317451253|emb|CBY87487.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae F3047]
gi|327467605|gb|EGF13103.1| toluene tolerance efflux ABC superfamily ATP binding cassette
transporter, binding protein [Haemophilus aegyptius ATCC
11116]
Length = 166
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + I ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGIGALVFLGLRVANVQGFAETKSYTVTAIFNNIGGLKVRAPLKIGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
R+ + LD++ I + + +++ +I+T GL G YI L+ + T
Sbjct: 68 RVSAITLDEKSY-LPKVSIAINQEYNEIPENSSLSIKTSGLLGEQYIALTMGFDDGDTAM 126
>gi|315443553|ref|YP_004076432.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261856|gb|ADT98597.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 341
Score = 87.3 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 84/299 (28%), Gaps = 9/299 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+++ T + F + + + + + + A + L + +VR G
Sbjct: 2 TRSTATLIK-FTIFGVVMAVLTAFLFLVFSDTRTGAANEYSAVFKDASRLKSGDTVRIAG 60
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I VG + + L + L +T L T IR L G Y+EL +
Sbjct: 61 IRVGTVKDVELQPD--KTVLVTFDAERNTKLTTGTNVAIRYLNLVGDRYMELVDTPDSNQ 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPL 176
+ A R + + ++ + S + +Q ++
Sbjct: 119 ILPAGARIPEDRTAPALDLDVLLGGLRPVIQGLNPQDVNALTSSLIQILQGQGGTLDSLF 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + +++ ID + D + D + +
Sbjct: 179 AKTSSFTTSLADNNQVIEQLIDDLRTVLDTLAEDGDEFSGAIDKLDQLVGGLAEDRDPIG 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + + NTV ++ ++D L +
Sbjct: 239 TAITALDNGTASIADLLSRGRAPLSNTVDELNRLAPLVDNDLDRLDATLQRLPEIYRKL 297
>gi|293391910|ref|ZP_06636244.1| conserved ABC-type transport system protein, periplasmic component
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952444|gb|EFE02563.1| conserved ABC-type transport system protein, periplasmic component
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 169
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGIGSLIFLGLKVANVQGFSETKSYRVYATFDNIGGLKVRAPLKVGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
R+ + LD + I + + +++ +I+T GL G YI LS + +
Sbjct: 68 RVSEITLDPQTY-LPKVTIAINQEYNEIPETSSLSIKTSGLLGEQYIALSIGFNDGEIAM 126
Query: 126 QIATER 131
++
Sbjct: 127 LKDGDK 132
>gi|41406663|ref|NP_959499.1| hypothetical protein MAP0565 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395012|gb|AAS02882.1| hypothetical protein MAP_0565 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 350
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 87/286 (30%), Gaps = 6/286 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ V +F ++L S + V L V G+
Sbjct: 10 RSMMIKVSIFAAAMLLVSAGLVVVFGDFRFGPESTYHATFV---DVSRLKAGQKVCIAGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + + L+++ + LY ST A IR + L G Y+E+++ E +
Sbjct: 67 PVGAVEAVKLNRDNT--IDVTFGVDKRYTLYSSTRAVIRYENLVGDRYLEITSGPGELRK 124
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ T +Q + + + +I+ ++ +
Sbjct: 125 LPAGGTINSQHTQPALDLDALLGGLRPVLKGL-DADKVNTISSAVIQLLQGQGGALSNVL 183
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S + + + + + + + + + I
Sbjct: 184 ADTSAFTSALGQRDQLIGDVINNLNTVLTTVDQRSAQFSASVDQLQQLITGLAKHKDDIA 243
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I ++ ++ + N+ ++ + + + ++D+ ++ +
Sbjct: 244 GAIPPLASTTTDLTELLQNSRRPLQGVLENTRPLATELDNRKAEVN 289
>gi|262201468|ref|YP_003272676.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262084815|gb|ACY20783.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 339
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 5/139 (3%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
FV+ + + L GP I +GL + V +G+ +GR+ +
Sbjct: 15 FVIVGIIAAVLVSNTLRV--PVSGPTTTYHIAFTD-AEGLVEGNPVTMSGVRIGRVSSVR 71
Query: 73 LDQ--EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ + + + I+ D L A IR + G YI LS R +
Sbjct: 72 FAPQADGTSLADVEVEIQRDRELPQQIHAAIRYGDMLGARYIALSEGRPGQPGRNGTTIP 131
Query: 131 RNQRAMITATPSGINYFIS 149
+ + + +N F
Sbjct: 132 VDATSPPVNLTALMNGFQP 150
>gi|239904659|ref|YP_002951397.1| hypothetical protein DMR_00200 [Desulfovibrio magneticus RS-1]
gi|239794522|dbj|BAH73511.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 303
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/293 (15%), Positives = 84/293 (28%), Gaps = 11/293 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S++ Y + L + L N + +IR + LS V++ G
Sbjct: 7 SRSDYLKAAGALALGLVILGGFMVVLGG-NWFWVKYDHYLIRFTA-IKDLSRGRPVKYAG 64
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VGR+ + LD P + I PL+ T A I +GL G Y+ L + +
Sbjct: 65 LDVGRVEDITLDVNDPRYIGVTVAIHQGFPLFGGTVARIAQKGLVGDYYVLLELRGQPGE 124
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
I A M + A I I + I + P T
Sbjct: 125 KIVPGAAIPAITTMDVQELAA------KAGEMLDDIRPKINEIAENISLLFTPENTESLK 178
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
T + S+ T+ + +DK++ ++ + +
Sbjct: 179 KALEGTPRLVEDLRLAANDFRRNWEALSAKGGKAAETLDASLKRMDKVVTTVEGELTKTL 238
Query: 243 L---ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + E + +++ L S +
Sbjct: 239 ATFRTQAEHVGGLTSDVRQGFNYDQEQLEEILRNLNRTSREVRELASRLRERP 291
>gi|94263504|ref|ZP_01287316.1| Mammalian cell entry related [delta proteobacterium MLMS-1]
gi|93456142|gb|EAT06285.1| Mammalian cell entry related [delta proteobacterium MLMS-1]
Length = 375
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/360 (11%), Positives = 102/360 (28%), Gaps = 19/360 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ Y ++G+FV L ++ L + V + SV G+ S V+
Sbjct: 1 MSNQPNYYTIGIFVSIGLVLFLGALAVLG-TGALWKETVTVETYLDESVQGIDRGSQVKM 59
Query: 61 NGIPVGRIVGLFL-------DQEYPNHSLAKALIRPDTP-----LYPSTTATIRTQGLAG 108
G+ VGR+ + D S I + + + G
Sbjct: 60 RGVTVGRVDDITFVGLRYHPDTRQVGDSYVLLEISLELSEFGGLSPEEFKKFLENEIERG 119
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+ L + + + + + N +I +A T ++ ++ +
Sbjct: 120 LRIRLLPMGITGAAYLEMDYLDPGRHPPLPIQWTPENQYIPSAPGTFARLEETFESLGNT 179
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ----VTPHSSDSKNTFNTITDLI 224
+ IE + + + S++ + I
Sbjct: 180 MAKIEDMDIQKTLKQLDNLIQSLDKSVQSFDLAGISTRAEVFLEELSETNRRISGFIGPI 239
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
++ + + +V S+ D+ + +T + + + +
Sbjct: 240 DDPEEKRTDLHTVLQDSRNILQKVDSSLDRLQLDKDGGAADQIAQTLENLHQASEMLPET 299
Query: 285 LSDFSSKMKSKETSAFLEN--IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ S + S+ + S + +R +R + Q I + + +
Sbjct: 300 MDSIKVTTASLQESSKSVERLSSRSYTMLRGRNEELRTLLRNMQIISENLLDLSQDAKSY 359
>gi|312888836|ref|ZP_07748399.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
gi|311298711|gb|EFQ75817.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
Length = 326
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 38/326 (11%), Positives = 86/326 (26%), Gaps = 6/326 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E VG+FV L +I+ L + + V GL ++V F+
Sbjct: 4 EENKRAIIVGVFVFLGLLIFVLAIFTLGGQQKTFVKNIHLSAVF-NDVAGLKKGNNVWFS 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG I + + K I ++ + I + GL G I +
Sbjct: 63 GVKVGTISSIRFT--GLSQVDVKMDIDQSVQSFIHRNAGVRISSDGLIGNKIIVIDGGSP 120
Query: 120 EKKTIFQIATERNQRA-MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + + N + S I + + +T
Sbjct: 121 NAPMVEDGNMLQAENMLSTDDIMKTLQKNNENLLAITTDFKKLSSQIVQGKGLVGSLMTD 180
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T +++ V + + + S + +L T
Sbjct: 181 TALSMKFRQIVTNLQTTTENTAKMANGLNHFSDKLNTKGGLVDNLATDTTVFNHLKASVA 240
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
Q + + + +NT +V + +++ L+ +
Sbjct: 241 QLQKATANASAITENLTRASNKLNTTDNVLGVLLNDPKQAEQMKSTLNYLNESSIKLNDD 300
Query: 299 AFLENIADSTSNMRSSISAIREITDQ 324
+ + + ++
Sbjct: 301 LEAAQHNFLLKGFFKNRAKEQAKQNK 326
>gi|145632450|ref|ZP_01788185.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 3655]
gi|145634243|ref|ZP_01789954.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae PittAA]
gi|145636463|ref|ZP_01792131.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae PittHH]
gi|145640770|ref|ZP_01796353.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae R3021]
gi|229843876|ref|ZP_04464017.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 6P18H1]
gi|229846117|ref|ZP_04466229.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 7P49H1]
gi|144987357|gb|EDJ93887.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 3655]
gi|145268687|gb|EDK08680.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae PittAA]
gi|145270288|gb|EDK10223.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae PittHH]
gi|145274696|gb|EDK14559.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 22.4-21]
gi|229811121|gb|EEP46838.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 7P49H1]
gi|229812870|gb|EEP48558.1| conserved ABC-type transport system protein, periplasmic component
[Haemophilus influenzae 6P18H1]
Length = 166
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 51/120 (42%), Gaps = 2/120 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + I ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGIGALVFLGLRVANVQGFAETKSYTVTAIFNNIGGLKVRAPLKIGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
R+ + LD++ I + + +++ +I+T GL G YI L+ + T
Sbjct: 68 RVSAITLDEKSY-LPKVSIAINQEYNEIPENSSLSIKTSGLLGEQYIALTIGFDDGDTAM 126
>gi|227538270|ref|ZP_03968319.1| mce family protein [Sphingobacterium spiritivorum ATCC 33300]
gi|227241785|gb|EEI91800.1| mce family protein [Sphingobacterium spiritivorum ATCC 33300]
Length = 315
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 90/291 (30%), Gaps = 5/291 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T VG + + F +L ++ + + G+VDGL+ V NG
Sbjct: 4 ANETKVGALTIVAIALLFIGYSFLKGNDVFSSENTFYTVY--GNVDGLAVSKPVMVNGYQ 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+GR+ + L + + I+ + + +T A I + L G I +
Sbjct: 62 IGRVSKMTLMPD--GQIRTEFKIKKEYEIPSNTVARIMSADLLGSKIIVFNLGNSTTLAN 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + + N + + I + + ++
Sbjct: 120 DGDPLTSDVQQNLMEKVEPLQKKVENIAARMDSVLVAVNAILDKDFQKDVKRSVHSISVT 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + ++ ++ ++ + LD ++ +D
Sbjct: 180 MKNIEGITGEVNGLLGTEKARLGRIMANLESITVNFKNNGKKLDHIMNNLDNVSDQMAKI 239
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
I+ + + ++ V + + + + + D L ++ +S +
Sbjct: 240 EIKSTVDKANQAMQDVQDITNKINNGDGSISLLLND-DKLYNNLNSASEEL 289
>gi|16273013|ref|NP_439242.1| ABC transporter periplasmic protein [Haemophilus influenzae Rd
KW20]
gi|260580170|ref|ZP_05848000.1| ABC transporter periplasmic protein [Haemophilus influenzae RdAW]
gi|1176836|sp|P45029|Y1085_HAEIN RecName: Full=Putative ABC transporter-binding protein HI_1085
gi|1574639|gb|AAC22741.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260093454|gb|EEW77387.1| ABC transporter periplasmic protein [Haemophilus influenzae RdAW]
Length = 167
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGIGALVFLGLRVANVQGFAETKSYTVTATFDNIGGLKVRAPLKIGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
R+ + LD++ I + + +++ +I+T GL G YI L+ + T
Sbjct: 68 RVSAITLDEKSY-LPKVSIAINQEYNEIPENSSLSIKTSGLLGEQYIALTMGFDDGDTAM 126
>gi|120401523|ref|YP_951352.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954341|gb|ABM11346.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 278
Score = 86.9 bits (212), Expect = 6e-15, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 44/136 (32%), Gaps = 7/136 (5%)
Query: 1 MESKNYYTS--VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K +G+FVV +F I ++ + +V GL++ V
Sbjct: 1 MTNKISAVLWRLGIFVVVCALGAFALIAVFAQLRFEREQRYTAVFA---NVSGLTSGDFV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ L + + L + A I+ L G Y+ +
Sbjct: 58 RIAGVEVGKVR--TLTVRDDSTVAVEFGADDSVVLTDGSRAVIKYDNLIGDRYLAIEEGA 115
Query: 119 KEKKTIFQIATERNQR 134
+ R
Sbjct: 116 GGTTKLRPGDAIPLDR 131
>gi|30064531|ref|NP_838702.1| cytoplasmic membrane protein [Shigella flexneri 2a str. 2457T]
gi|56480282|ref|NP_708992.2| cytoplasmic membrane protein [Shigella flexneri 2a str. 301]
gi|110807059|ref|YP_690579.1| cytoplasmic membrane protein [Shigella flexneri 5 str. 8401]
gi|6648608|gb|AAF21248.1|AF053073_1 VpsC [Shigella flexneri]
gi|30042790|gb|AAP18513.1| cytoplasmic membrane protein [Shigella flexneri 2a str. 2457T]
gi|56383833|gb|AAN44699.2| cytoplasmic membrane protein [Shigella flexneri 2a str. 301]
gi|110616607|gb|ABF05274.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281602576|gb|ADA75560.1| cytoplasmic membrane protein [Shigella flexneri 2002017]
gi|313648564|gb|EFS13006.1| mce related family protein [Shigella flexneri 2a str. 2457T]
Length = 183
Score = 86.9 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTESTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|171320052|ref|ZP_02909122.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MEX-5]
gi|171094711|gb|EDT39755.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MEX-5]
Length = 539
Score = 86.9 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/407 (7%), Positives = 103/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + + T S +
Sbjct: 219 ----------------YDQYVGVNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + ++ + + +
Sbjct: 260 ---AFQTPPNQGTGATAPNNTTFRLGSDEGDAMRDPDGQPLQVVMNFNQSLRGLAVGAPV 316
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +T++ + + N+ R+ +
Sbjct: 317 DFRGIVLGEVTNIGIDYDPKTKNFLMPVTMNVYPERLGRRFRETIESQGEPARRDIVERL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + + R + + + +
Sbjct: 377 VKHGLRGQLRTGNLLTSQLYVALDFFPKAPPATIDTTRQLLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + +S + + + + A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALSNADKLFKQLDTQ-IAPQARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 534
>gi|260203754|ref|ZP_05771245.1| MCE-family protein [Mycobacterium tuberculosis K85]
gi|289573190|ref|ZP_06453417.1| MCE-family protein mce2B [Mycobacterium tuberculosis K85]
gi|289537621|gb|EFD42199.1| MCE-family protein mce2B [Mycobacterium tuberculosis K85]
Length = 343
Score = 86.9 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 83/297 (27%), Gaps = 9/297 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ +G+ + + F+ I + V GL VR
Sbjct: 1 MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVR--FHHTTGYSAVFTH-VSGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L + L + L +TTA+IR L G Y+EL
Sbjct: 58 AGVEVGKVAKVTLI-DGDKQILVDFTVDRSLSLDQATTASIRYLNLIGDRYLELGRGHSG 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAEN-----TSKKISDSSRHIQKIIENIEKP 175
++ + + F + + S Q I
Sbjct: 117 QRLAPGATIPLEHTHPALDLDALLGGFRPLFQTLDPDKVNSIASSIITVFQGQGATINDI 176
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L T + T++ ++ + T + +++ + K
Sbjct: 177 LDQTASLTATLADRDHAIGEVVNNLNTVLATTVKHQTEFDRTVDKLEVLITGLKNRADPL 236
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
I ++ + ++ + Q + ++DH+L
Sbjct: 237 AAATAHISSAAGTLADLLGADRPLLHSSFGHLEGIQQPLIDELAELDHVLGKLPDAY 293
>gi|330427910|gb|AEC19244.1| hypothetical protein PT7_0704 [Pusillimonas sp. T7-7]
Length = 564
Score = 86.9 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 42/402 (10%), Positives = 112/402 (27%), Gaps = 32/402 (7%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATI 101
++ L S V + I VG ++G LD D + T
Sbjct: 189 TLFAPNLGSLEIGSPVYYRRIEVGHVIGYDLDPNGDQVNIQVFIDAPNDKFVTKDTRFWN 248
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ ++ + ++ S + E +
Sbjct: 249 VSGFNLTLSAEGFNVETGSLVSMLAGGVAFALPEHSLVEESEPAKPDTRFE-------LA 301
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
S Q + + + +++ + + ++
Sbjct: 302 STFAQAMADPDGPAFPIELHFYQSVRGLKVGAPVDFRGLELGEVYDIDLEFDSDSKRFFA 361
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ L + +++ ++ + +R + + +
Sbjct: 362 LVRIRLYPLRFGEVYERLAKLNPGTTGYPGAALLGPMVQHGLRGQIRASNLLTGQQYVAL 421
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + +++ A + IA S ++ IS+I D + I +
Sbjct: 422 DFFPDADPVEFDAEKRPAIIPTIAGSFDRLQQQISSIVGKLDAVP--------FDKIGTE 473
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
L S + +L+ ++ + + +A + + RD+ ++N +
Sbjct: 474 LQGSLESARKLLDRLES--------QVAPEASGVLKSARDSLNQLNAILADNSP------ 519
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
N+I+ +R+L + + +P ++ GRE+
Sbjct: 520 --MNNNIERTMRELSNAAKSLRALADYLQTHPTALIRGREES 559
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 66/249 (26%), Gaps = 13/249 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DGP + + SV GL + V F G+ +G + + L+ + +
Sbjct: 312 DGPAFPIELHFYQSVRGLKVGAPVDFRGLELGEVYDIDLEFDSDSK-------------R 358
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
IR L E T + A + +
Sbjct: 359 FFALVRIRLYPLRFGEVYERLAKLNPGTTGYPGAALLGPMVQHGLRGQIRASNLLTGQQY 418
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + TIA ++I + ++ S
Sbjct: 419 VALDFFPDADPVEFDAEKRPAIIPTIAGSFDRLQQQISSIVGKLDAVPFDKIGTELQGSL 478
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + D + S + L+ L + + ++ + T+ ++ ++
Sbjct: 479 ESARKLLDRLESQVAPEASGVLKSARDSLNQLNAILADNSPMNNNIERTMRELSNAAKSL 538
Query: 275 QEVGQKIDH 283
+ + +
Sbjct: 539 RALADYLQT 547
Score = 44.9 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 32/89 (35%), Gaps = 10/89 (11%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
S+ + + + +L + + + I S DGL + VR+
Sbjct: 38 SRISWIWL----LPLLAALVGGSLLVRG---WLHMGPTINISF-ESADGLEVGQTKVRYK 89
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ +G + G+ + + + + A + +
Sbjct: 90 DVVIGLVSGIKVAPDR-SKVIVSAELNRE 117
>gi|315297941|gb|EFU57211.1| Mce family protein [Escherichia coli MS 16-3]
Length = 183
Score = 86.9 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|313157355|gb|EFR56778.1| virulence factor Mce family protein [Alistipes sp. HGB5]
Length = 333
Score = 86.9 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 105/290 (36%), Gaps = 8/290 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+F V+++ ++ I +L + + + ++G+ S + G+ +
Sbjct: 3 REVKIGIFAVAMIGVAWAGIRFLKGFDIFSRNVEYYAAY--DQINGVQNASPIMMKGVKI 60
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL D + + + I+ + + + A I + GL G IE++ +
Sbjct: 61 GSVTGLSFDPARSDKVVLRFTIKREYRIPTDSEAKIFSNGLMGAKAIEITYGTADTYLHK 120
Query: 126 QIATERNQRAMITATP-SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
++ + S +++F + +S + ++ +++E+ + T+ N+
Sbjct: 121 GDTLRSSRDRDLMDVAGSELDFFKQKVSQLTGDLSRALDNLNRLMEDNAGNIAGTLGNLN 180
Query: 185 TISTVLANNISHIDKMMHTT-----QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+++ +A +S + + + + D+ ++I + + +
Sbjct: 181 SVTGDMAQILSAEKNNLKSALENLSKFSDMLGDNAQRVDSIIGNVDRVVAQFSEEEFAVK 240
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + + + E + + + LL+D
Sbjct: 241 LSQTVGHLDDLVARIAQGEGTMGKLMNDPELYDSLNRASENLSALLADVK 290
>gi|294084612|ref|YP_003551370.1| cell entry-like protein [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664185|gb|ADE39286.1| Mammalian cell entry related protein [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 151
Score = 86.9 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 47/136 (34%), Gaps = 5/136 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G V+ Y + E+ G+ GLS VR
Sbjct: 1 MQRNTLEMIMGAVVLLAAAGFVTLAYEAADIQ--GTNGYEIQAEF-GATGGLSVGDDVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI +GRI LD + + + I PD + ++A I L G Y+EL
Sbjct: 58 SGIKIGRITSQTLDPDTYS-ARIAMAINPDILIPADSSARITAASLLGGNYLELMPGADI 116
Query: 121 KKTIFQIATERNQRAM 136
+ A + R
Sbjct: 117 DM-LAPGAIIYDTRDP 131
>gi|107021787|ref|YP_620114.1| hypothetical protein Bcen_0227 [Burkholderia cenocepacia AU 1054]
gi|116688734|ref|YP_834357.1| hypothetical protein Bcen2424_0711 [Burkholderia cenocepacia
HI2424]
gi|170732031|ref|YP_001763978.1| hypothetical protein Bcenmc03_0678 [Burkholderia cenocepacia MC0-3]
gi|254246290|ref|ZP_04939611.1| Mammalian cell entry related-protein [Burkholderia cenocepacia
PC184]
gi|105891976|gb|ABF75141.1| Mammalian cell entry related protein [Burkholderia cenocepacia AU
1054]
gi|116646823|gb|ABK07464.1| Mammalian cell entry related domain protein [Burkholderia
cenocepacia HI2424]
gi|124871066|gb|EAY62782.1| Mammalian cell entry related-protein [Burkholderia cenocepacia
PC184]
gi|169815273|gb|ACA89856.1| Mammalian cell entry related domain protein [Burkholderia
cenocepacia MC0-3]
Length = 539
Score = 86.5 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 41/409 (10%), Positives = 114/409 (27%), Gaps = 42/409 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA--E 152
Y + + + + + T S + +
Sbjct: 219 ----------------YDQYVGMNTRWWQASGVDLRLDSSGLKLNTQSLATVILGGIAFQ 262
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ S ++ V+ N + + V
Sbjct: 263 TPPNQGSGTTAPNNTTFRLGSDEGDAMRDPDGQPLQVVMNFNQSLRGLAVGAPVDFRGIV 322
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
N D + + + + L + + V+ +
Sbjct: 323 LGEVTNIGIDFDPKTKNFLMPVTINVYPERLGRRFRETIESKGEPARREIVERLVQHGLR 382
Query: 273 TFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
G + L K+ ++ + +++ ++ K +
Sbjct: 383 GQLRTGNLLTSQLYVALDFFPKAPPVKIDTAHLPFELPTVPNTLDELQLQVADIAKKLDK 442
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ + I +NLN + +L +++ + +A+ + + T +
Sbjct: 443 VP-FDQIGANLNSALANADKLFKQLD--------TQVAPEARDTLSAAKQTFSTAEATLQ 493
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 494 Q--------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 534
>gi|115350656|ref|YP_772495.1| hypothetical protein Bamb_0602 [Burkholderia ambifaria AMMD]
gi|172059687|ref|YP_001807339.1| hypothetical protein BamMC406_0626 [Burkholderia ambifaria MC40-6]
gi|115280644|gb|ABI86161.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
AMMD]
gi|171992204|gb|ACB63123.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MC40-6]
Length = 539
Score = 86.5 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/407 (7%), Positives = 102/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + + T S +
Sbjct: 219 ----------------YDQYVGVNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + ++ + + +
Sbjct: 260 ---AFQTPPNQGTGATAPNNTTFRLGSDEGDAMRDPDGQPLQVVMNFNQSLRGLAVGAPV 316
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +T++ + + N+ R+ +
Sbjct: 317 DFRGIVLGEVTNIGIDYDPKTKNFLMPVTMNVYPERLGRRFRETIESQGEPARRDIVERL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + R + + + +
Sbjct: 377 VKHGLRGQLRTGNLLTSQLYVALDFFPKAPPAKIDTTRQPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + +S + + + + A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALSNADKLFKQLDTQ-IAPQARDTLSAAQQTFSTAQATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 534
>gi|254820122|ref|ZP_05225123.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 342
Score = 86.5 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 79/302 (26%), Gaps = 11/302 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ +F L F ++ +V GL + VR G+ VG++
Sbjct: 11 RLAIFATVCLLSLFALFAVFAQLR--FQKDKTYHAEFT-NVAGLKSGDFVRIAGVEVGKV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ ++Q ++ + L T A IR L G ++ L + K +
Sbjct: 68 KNISIEQN--AFAVVEFSADESVVLTQGTKAVIRWSNLVGDRFLALEEGAGDVKPLKPGQ 125
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT------TTIAN 182
T R + ++ Q I + T T
Sbjct: 126 TIPLARTAPALDLDALIGGFHPLFEALDPAQVNALTGQLISTFQGQGATVSSFLAQTATL 185
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
T++ I + D + K+ V I
Sbjct: 186 TSTLADRDELIGHVIANLNTVLASLGDQHDQFAKAVDSLQELMKGLAARKSDISNGVAHI 245
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ ++ + NT+H + D LL+ ++ +
Sbjct: 246 NAASGSIADLLRQARPALQNTIHQADRVSGIVLADHDYFDDLLNTLPDAYQALDRQGLYG 305
Query: 303 NI 304
+
Sbjct: 306 DY 307
>gi|240170049|ref|ZP_04748708.1| MCE-family protein Mce4F [Mycobacterium kansasii ATCC 12478]
Length = 556
Score = 86.5 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ ++++L + V GL +++V
Sbjct: 1 MIDRLTRIQLAIFGVITVITLVVMAVFYLRLPATFGLGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
F G+ VGR+ + L+ A+ + TP+ + TAT+++ G Y
Sbjct: 60 FRGVQVGRVESVELNPSG---VTAEMRLNSGTPIPSNVTATVKSVSAIGEQY 108
>gi|258543492|ref|YP_003188925.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-01]
gi|256634570|dbj|BAI00546.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-01]
gi|256637628|dbj|BAI03597.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-03]
gi|256640680|dbj|BAI06642.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-07]
gi|256643737|dbj|BAI09692.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-22]
gi|256646792|dbj|BAI12740.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-26]
gi|256649845|dbj|BAI15786.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-32]
gi|256652833|dbj|BAI18767.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655889|dbj|BAI21816.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-12]
Length = 318
Score = 86.5 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 36/304 (11%), Positives = 85/304 (27%), Gaps = 15/304 (4%)
Query: 1 MESKNY-YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M T +G FV+ F I ++ P E + S+ GLS + V
Sbjct: 1 MSQSTNRKTLIGAFVILGGLLGLFIIMAFGHM-RFFTPSREAAVVFQNSITGLSVGAPVN 59
Query: 60 FNGIPVGRIVGL--FLDQ-EYPNHSLAKALIRPDTP-----LYPSTTATIRTQGLAGITY 111
F G+ VG + + D + + + PD + T +I+ G+
Sbjct: 60 FRGVKVGTVKSITLRFDPQDRKAYIPVVLTLEPDQIHVVRDVPGGTKVSIQEMISNGLRA 119
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
++ I + ++ P N ++ + + I +
Sbjct: 120 ELNLQSFVTGQS--NIELDFDKSVAPVLHPRITNLPEIPVRLSTMEKLKDTIGQIPIKDI 177
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
++ + + I + T + + + + +
Sbjct: 178 SHHADLALLSITSLSDHLREDLPPLISSVKETADRSHETVQAATDAIKDLQAKLDVTLLK 237
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ N + + + T+ +++ +D L D ++
Sbjct: 238 MDKLMETGNT---QLDARGKDLHATLASATKTLDSLQDILSPRSIDRANLDASLRDIAAA 294
Query: 292 MKSK 295
S
Sbjct: 295 AASL 298
Score = 53.4 bits (125), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 65/203 (32%), Gaps = 12/203 (5%)
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ +F KS V++ +K+ + K S
Sbjct: 124 QSFVTGQSNIELDFDKSVAPVLHPRITNLPEIPVRLSTMEKLKDTIGQIPIKDISHHADL 183
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
L +I + ++R I+ ++ + T++ T + D K + K++ +
Sbjct: 184 ALLSITSLSDHLRE--DLPPLISSVKETADRSHETVQAATDAIKDLQAKLDVTLLKMDKL 241
Query: 360 SALKENN--SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+ KD + + T + + + ++ ++ +R +
Sbjct: 242 METGNTQLDARGKDLHATLASATKTLDSLQDILSP--RSIDRA------NLDASLRDIAA 293
Query: 418 TVNHFDDCLNNFERNPQDIVWGR 440
++ ERNPQ ++ GR
Sbjct: 294 AAASLRGFASDVERNPQLLLMGR 316
>gi|317401489|gb|EFV82121.1| hypothetical protein HMPREF0005_00960 [Achromobacter xylosoxidans
C54]
Length = 318
Score = 86.5 bits (211), Expect = 7e-15, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++++ G+F + +L + W+ R + I +V GL+ S+VR+
Sbjct: 1 MENRSHALMAGIFTLVLLAAAALVAVWIGRDR---TKLQTYEIISATAVSGLNPQSTVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ L L+ + P + + P+TP+ ST A + QG+ G+ +EL
Sbjct: 58 QGVPVGKVQSLALNPDKPGQVRIRIGVAPNTPITESTWAELGVQGVTGMANVELRDDGSS 117
Query: 121 KKTIFQIATERNQRA 135
K + A
Sbjct: 118 FKRLASSAANPAAIP 132
Score = 39.9 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 15/166 (9%), Positives = 55/166 (33%), Gaps = 6/166 (3%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ Q+ L+S+ + +N+ T++++++ + + + + +
Sbjct: 137 FLDRIEQRGGRLISNVEDATEQLRRLLSEQNVQALTASLQNATDITHSLKEASRDLGPAL 196
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + +L +S++ ++ +++ + L + +N
Sbjct: 197 AKLGPLVDSLGSTSRQADRAAREVADLAQ--QARQLLARLNAPDGALAAATRSLN----D 250
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
I L + ++ + E L + PQ +++
Sbjct: 251 IAFAASRLDGETLPAVTSMAASVSEAARGATFTLRRVDNTPQSLLF 296
>gi|126436741|ref|YP_001072432.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236541|gb|ABN99941.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 342
Score = 86.5 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 48/290 (16%), Positives = 84/290 (28%), Gaps = 11/290 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ +F+V LF F ++ + +V GL D VR G+ VG++
Sbjct: 11 RLAIFMVVCLFGMFAMFAIFAQLRFQSERTYRAV---FTNVSGLEADQFVRIAGVEVGKV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + L + L T A IR L G Y+ L + K + +
Sbjct: 68 KAISIQPDTT--VLVEFSADDTVVLTEGTRAVIRYDDLIGGRYLGLEEGVGDTKKLNPGS 125
Query: 129 TERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
T R + + + S R Q I L+ T A
Sbjct: 126 TIPVARTSPALDLDALIGGFRPLFRALDPDQVNALSSQLIRAFQGQGATISSFLSQTAAL 185
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
T++ I + S + + K V
Sbjct: 186 TNTLADRDQLIGQVIGNLNTVLGSLGDQSTQFAKAVESLSQLVATLAGRKQDISNSVAYT 245
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
S+ ++ + TVH++ T T +D+LL+
Sbjct: 246 NAAAGSISDLLAQARPPLQKTVHELDRTASTVLADKDYVDNLLNTLPDTY 295
>gi|326333399|ref|ZP_08199645.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948795|gb|EGD40889.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 324
Score = 86.5 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/319 (10%), Positives = 89/319 (27%), Gaps = 8/319 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G +++L + G GL T VR G+ V
Sbjct: 8 NPVKIGAVSIAVLLMLMVMAFKADSLPLIGGGTTYY-ANFSE-AGGLKTGDEVRVAGVRV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + LD IR ++ A +R + L G ++EL + +
Sbjct: 66 GKVDSIELDGN---QVKVGFKIREKVNFGENSGAGVRVKTLLGDMFLELQPAGEGQMKAG 122
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + ++A +++ + + + + + + +
Sbjct: 123 ATIPVDRTESPYDVVQAFEGLADTSANIDKDQLAAALTTLADLTRSTPEEFQAALTGVSD 182
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S LA ID ++ D ++ + + V+ +L +
Sbjct: 183 LSRNLAAKDERIDSLLTQLDRVTKVLDERDEDLIALMNDANQLFAALVERREAVHNLLLS 242
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
Q S + V ++ D++ ++ + + ++ + N
Sbjct: 243 TQQLSKELSQL---VDDSRADLKPALESLDVILDVFTKNEENLEKSLRLMAPFYKVFNNT 299
Query: 306 DSTSNMRSSISAIREITDQ 324
+
Sbjct: 300 LGNGPWWDTYVQNMPPVPA 318
>gi|189463956|ref|ZP_03012741.1| hypothetical protein BACINT_00291 [Bacteroides intestinalis DSM
17393]
gi|189438529|gb|EDV07514.1| hypothetical protein BACINT_00291 [Bacteroides intestinalis DSM
17393]
Length = 298
Score = 86.5 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 94/290 (32%), Gaps = 9/290 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +G+ + L + I +L P ++ +++GL+ S V
Sbjct: 2 MKYLTKEVRIGIAGIVALCILVYGINYLKGI-HLFKPTNYFYVKFH-NINGLTKSSPVFA 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + L+ D +A+ + P+ + +TA + ++ + G+ L
Sbjct: 60 DGFRVGIVRDLYYDYTQSGKVIAEIDVDPELRIPKGSTAELTSELMGGVKMNLLLANNPR 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+K + + ++ + K + + + + P
Sbjct: 120 EKY------QTGDTLQGSVNNGVMDQVAAVMPQVEKMLPKLDSILASLNTILGDPAIPGT 173
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + S + + + + + + + +L ++ A ++
Sbjct: 174 LHSVQNTMANMEVTSQQLQAIMSKDIPQLTQKLNTIGDNFITVSNNLKEIDYAAAFASID 233
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L N+++ ++ + + + ++D LL D S
Sbjct: 234 STLANVKMITDQLGRKDNTIGLLLNDPS-LYNNLNATTANAASLLEDLKS 282
>gi|307825466|ref|ZP_07655684.1| Mammalian cell entry related domain protein [Methylobacter
tundripaludum SV96]
gi|307733352|gb|EFO04211.1| Mammalian cell entry related domain protein [Methylobacter
tundripaludum SV96]
Length = 304
Score = 86.5 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/178 (20%), Positives = 71/178 (39%), Gaps = 6/178 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +N+ GLF+++++ S I+W+ NQ I SV GL+ +S+V +
Sbjct: 1 MGRENHALITGLFLIALVTASTAIIFWIGTMNQ---ERNLYAISTRASVSGLNPESTVFY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG+++ + D L + L AT+R +G+ G+T I+L
Sbjct: 58 RGIAVGKVLNVQFDPLDSGTILVPIEVDKKIVLSKGVYATLRLKGVTGLTQIQLEDSGTI 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + PS + + + E K + + ++ + +
Sbjct: 118 SEELPPGDNPMTRIP---LVPSLTDKLMDSGEELLHKADHLMQRLSSLLNDENEKNIG 172
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 50/124 (40%), Gaps = 5/124 (4%)
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRA 375
+ + I ++ ++ +T L++ + + ++ + + + ++L + Q
Sbjct: 164 NDENEKNIGGILSNLKTLTDKLSELQKSVDKALAGVPELTTDARKTMSNIDALANELQGL 223
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
++ S K + S N +Q+ L + L+ +LQ T E NPQ+
Sbjct: 224 TREVKNLSAKAGNLVDSGKNTGDALAQTTLPKVNKLLTELQSTTQQVKRVATMLENNPQE 283
Query: 436 IVWG 439
++ G
Sbjct: 284 LLLG 287
>gi|118472058|ref|YP_885538.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118173345|gb|ABK74241.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 351
Score = 86.5 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 6/124 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +GL + ++ + + +++ G V GL VR
Sbjct: 1 MKIRG--ALIGLSLFMVVALTLTWMVYVTLRRDVAGRTVPYTAVFTD-VFGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD H+ +++ D ++ +T A++ Q + G Y+ LS ++
Sbjct: 58 AGVRVGRVEKIELDG---KHAKVSFVVQADQQVFGNTVASVTYQNIVGQRYLGLSLGKEG 114
Query: 121 KKTI 124
T+
Sbjct: 115 DPTL 118
>gi|332086466|gb|EGI91613.1| mce related family protein [Shigella dysenteriae 155-74]
Length = 183
Score = 86.5 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|307313102|ref|ZP_07592728.1| Mammalian cell entry related domain protein [Escherichia coli W]
gi|306907013|gb|EFN37521.1| Mammalian cell entry related domain protein [Escherichia coli W]
gi|315062499|gb|ADT76826.1| predicted ABC-type organic solvent transporter [Escherichia coli W]
gi|323376913|gb|ADX49181.1| Mammalian cell entry related domain protein [Escherichia coli KO11]
gi|324018355|gb|EGB87574.1| Mce family protein [Escherichia coli MS 117-3]
Length = 183
Score = 86.5 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|15803733|ref|NP_289767.1| hypothetical protein Z4556 [Escherichia coli O157:H7 EDL933]
gi|15833326|ref|NP_312099.1| hypothetical protein ECs4072 [Escherichia coli O157:H7 str. Sakai]
gi|16131083|ref|NP_417660.1| ABC transporter maintaining OM lipid asymmetry, anchored
periplasmic binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|74313730|ref|YP_312149.1| hypothetical protein SSON_3341 [Shigella sonnei Ss046]
gi|82545569|ref|YP_409516.1| hypothetical protein SBO_3189 [Shigella boydii Sb227]
gi|89109956|ref|AP_003736.1| predicted ABC-type organic solvent transporter [Escherichia coli
str. K-12 substr. W3110]
gi|110643433|ref|YP_671163.1| hypothetical protein ECP_3280 [Escherichia coli 536]
gi|117625485|ref|YP_858808.1| putative ABC-type organic solvent transporter [Escherichia coli
APEC O1]
gi|157156204|ref|YP_001464671.1| Mce family protein [Escherichia coli E24377A]
gi|157162677|ref|YP_001459995.1| Mce family protein [Escherichia coli HS]
gi|168751599|ref|ZP_02776621.1| Mce family protein [Escherichia coli O157:H7 str. EC4113]
gi|168754175|ref|ZP_02779182.1| Mce family protein [Escherichia coli O157:H7 str. EC4401]
gi|168763730|ref|ZP_02788737.1| Mce family protein [Escherichia coli O157:H7 str. EC4501]
gi|168769049|ref|ZP_02794056.1| Mce family protein [Escherichia coli O157:H7 str. EC4486]
gi|168777248|ref|ZP_02802255.1| Mce family protein [Escherichia coli O157:H7 str. EC4196]
gi|168781337|ref|ZP_02806344.1| Mce family protein [Escherichia coli O157:H7 str. EC4076]
gi|168786079|ref|ZP_02811086.1| Mce family protein [Escherichia coli O157:H7 str. EC869]
gi|168800907|ref|ZP_02825914.1| Mce family protein [Escherichia coli O157:H7 str. EC508]
gi|170018557|ref|YP_001723511.1| hypothetical protein EcolC_0507 [Escherichia coli ATCC 8739]
gi|170082727|ref|YP_001732047.1| organic solvent ABC transporter [Escherichia coli str. K-12 substr.
DH10B]
gi|170682506|ref|YP_001745465.1| Mce family protein [Escherichia coli SMS-3-5]
gi|187732525|ref|YP_001881892.1| Mce family protein [Shigella boydii CDC 3083-94]
gi|188491798|ref|ZP_02999068.1| Mce family protein [Escherichia coli 53638]
gi|191168642|ref|ZP_03030424.1| Mce family protein [Escherichia coli B7A]
gi|191174472|ref|ZP_03035972.1| Mce family protein [Escherichia coli F11]
gi|193065388|ref|ZP_03046459.1| Mce family protein [Escherichia coli E22]
gi|193070322|ref|ZP_03051265.1| Mce family protein [Escherichia coli E110019]
gi|194429135|ref|ZP_03061665.1| Mce family protein [Escherichia coli B171]
gi|194439157|ref|ZP_03071238.1| Mce family protein [Escherichia coli 101-1]
gi|195940049|ref|ZP_03085431.1| organic solvent ABC transporter [Escherichia coli O157:H7 str.
EC4024]
gi|208806878|ref|ZP_03249215.1| Mce family protein [Escherichia coli O157:H7 str. EC4206]
gi|208813538|ref|ZP_03254867.1| Mce family protein [Escherichia coli O157:H7 str. EC4045]
gi|208821923|ref|ZP_03262243.1| Mce family protein [Escherichia coli O157:H7 str. EC4042]
gi|209399165|ref|YP_002272663.1| Mce family protein [Escherichia coli O157:H7 str. EC4115]
gi|209920668|ref|YP_002294752.1| hypothetical protein ECSE_3477 [Escherichia coli SE11]
gi|215488509|ref|YP_002330940.1| predicted ABC-type organic solvent transporter [Escherichia coli
O127:H6 str. E2348/69]
gi|217327353|ref|ZP_03443436.1| Mce family protein [Escherichia coli O157:H7 str. TW14588]
gi|218555763|ref|YP_002388676.1| toluene ABC transporter membrane protein [Escherichia coli IAI1]
gi|218560263|ref|YP_002393176.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia coli S88]
gi|218691483|ref|YP_002399695.1| toluene ABC transporter membrane protein [Escherichia coli ED1a]
gi|218696898|ref|YP_002404565.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia coli 55989]
gi|218701962|ref|YP_002409591.1| toluene ABC transporter membrane protein [Escherichia coli IAI39]
gi|218706813|ref|YP_002414332.1| toluene ABC transporter membrane protein [Escherichia coli UMN026]
gi|238902295|ref|YP_002928091.1| putative ABC-type organic solvent transporter [Escherichia coli
BW2952]
gi|253771973|ref|YP_003034804.1| hypothetical protein ECBD_0549 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254163135|ref|YP_003046243.1| putative ABC-type organic solvent transporter [Escherichia coli B
str. REL606]
gi|254795142|ref|YP_003079979.1| putative ABC-type organic solvent transporter [Escherichia coli
O157:H7 str. TW14359]
gi|256018888|ref|ZP_05432753.1| predicted ABC-type organic solvent transporter [Shigella sp. D9]
gi|256024232|ref|ZP_05438097.1| predicted ABC-type organic solvent transporter [Escherichia sp.
4_1_40B]
gi|260846006|ref|YP_003223784.1| putative ABC-type organic solvent transporter [Escherichia coli
O103:H2 str. 12009]
gi|260857320|ref|YP_003231211.1| putative ABC-type organic solvent transporter [Escherichia coli
O26:H11 str. 11368]
gi|260869944|ref|YP_003236346.1| putative ABC-type organic solvent transporter [Escherichia coli
O111:H- str. 11128]
gi|261228204|ref|ZP_05942485.1| predicted ABC-type organic solvent transporter [Escherichia coli
O157:H7 str. FRIK2000]
gi|261255060|ref|ZP_05947593.1| putative ABC-type organic solvent transporter [Escherichia coli
O157:H7 str. FRIK966]
gi|291284567|ref|YP_003501385.1| hypothetical protein G2583_3918 [Escherichia coli O55:H7 str.
CB9615]
gi|293416622|ref|ZP_06659261.1| yrbD protein [Escherichia coli B185]
gi|293449526|ref|ZP_06663947.1| yrbD protein [Escherichia coli B088]
gi|297518301|ref|ZP_06936687.1| hypothetical protein EcolOP_11723 [Escherichia coli OP50]
gi|300817552|ref|ZP_07097768.1| Mce family protein [Escherichia coli MS 107-1]
gi|300823841|ref|ZP_07103965.1| Mce family protein [Escherichia coli MS 119-7]
gi|300897961|ref|ZP_07116337.1| Mce family protein [Escherichia coli MS 198-1]
gi|300904385|ref|ZP_07122233.1| Mce family protein [Escherichia coli MS 84-1]
gi|300918955|ref|ZP_07135510.1| Mce family protein [Escherichia coli MS 115-1]
gi|300926062|ref|ZP_07141884.1| Mce family protein [Escherichia coli MS 182-1]
gi|300929889|ref|ZP_07145331.1| Mce family protein [Escherichia coli MS 187-1]
gi|300938109|ref|ZP_07152883.1| Mce family protein [Escherichia coli MS 21-1]
gi|300979958|ref|ZP_07174810.1| Mce family protein [Escherichia coli MS 200-1]
gi|301326374|ref|ZP_07219738.1| Mce family protein [Escherichia coli MS 78-1]
gi|301644907|ref|ZP_07244876.1| Mce family protein [Escherichia coli MS 146-1]
gi|306816465|ref|ZP_07450597.1| hypothetical protein ECNC101_07604 [Escherichia coli NC101]
gi|307139879|ref|ZP_07499235.1| hypothetical protein EcolH7_17328 [Escherichia coli H736]
gi|309793772|ref|ZP_07688198.1| Mce family protein [Escherichia coli MS 145-7]
gi|312968468|ref|ZP_07782677.1| mce related family protein [Escherichia coli 2362-75]
gi|331643891|ref|ZP_08345022.1| VpsC [Escherichia coli H736]
gi|331654797|ref|ZP_08355797.1| VpsC [Escherichia coli M718]
gi|331659480|ref|ZP_08360422.1| VpsC [Escherichia coli TA206]
gi|331664806|ref|ZP_08365711.1| VpsC [Escherichia coli TA143]
gi|331670020|ref|ZP_08370865.1| VpsC [Escherichia coli TA271]
gi|331679272|ref|ZP_08379944.1| VpsC [Escherichia coli H591]
gi|331684840|ref|ZP_08385432.1| VpsC [Escherichia coli H299]
gi|54040597|sp|P64605|MLAD_ECO57 RecName: Full=Probable phospholipid ABC transporter-binding protein
mlaD
gi|54042860|sp|P64604|MLAD_ECOLI RecName: Full=Probable phospholipid ABC transporter-binding protein
mlaD
gi|12517808|gb|AAG58327.1|AE005547_13 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|606131|gb|AAA57994.1| ORF_f183 [Escherichia coli str. K-12 substr. MG1655]
gi|1789584|gb|AAC76225.1| ABC transporter maintaining OM lipid asymmetry, anchored
periplasmic binding protein [Escherichia coli str. K-12
substr. MG1655]
gi|13363545|dbj|BAB37495.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|73857207|gb|AAZ89914.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81246980|gb|ABB67688.1| conserved hypothetical protein [Shigella boydii Sb227]
gi|85675987|dbj|BAE77237.1| predicted ABC-type organic solvent transporter [Escherichia coli
str. K12 substr. W3110]
gi|110345025|gb|ABG71262.1| hypothetical protein YrbD precursor [Escherichia coli 536]
gi|115514609|gb|ABJ02684.1| putative ABC-type organic solvent transporter [Escherichia coli
APEC O1]
gi|157068357|gb|ABV07612.1| Mce family protein [Escherichia coli HS]
gi|157078234|gb|ABV17942.1| Mce family protein [Escherichia coli E24377A]
gi|169753485|gb|ACA76184.1| Mammalian cell entry related domain protein [Escherichia coli ATCC
8739]
gi|169890562|gb|ACB04269.1| predicted ABC-type organic solvent transporter [Escherichia coli
str. K-12 substr. DH10B]
gi|170520224|gb|ACB18402.1| Mce family protein [Escherichia coli SMS-3-5]
gi|187429517|gb|ACD08791.1| Mce family protein [Shigella boydii CDC 3083-94]
gi|187767455|gb|EDU31299.1| Mce family protein [Escherichia coli O157:H7 str. EC4196]
gi|188014370|gb|EDU52492.1| Mce family protein [Escherichia coli O157:H7 str. EC4113]
gi|188486997|gb|EDU62100.1| Mce family protein [Escherichia coli 53638]
gi|189000997|gb|EDU69983.1| Mce family protein [Escherichia coli O157:H7 str. EC4076]
gi|189358459|gb|EDU76878.1| Mce family protein [Escherichia coli O157:H7 str. EC4401]
gi|189361823|gb|EDU80242.1| Mce family protein [Escherichia coli O157:H7 str. EC4486]
gi|189366114|gb|EDU84530.1| Mce family protein [Escherichia coli O157:H7 str. EC4501]
gi|189374202|gb|EDU92618.1| Mce family protein [Escherichia coli O157:H7 str. EC869]
gi|189376827|gb|EDU95243.1| Mce family protein [Escherichia coli O157:H7 str. EC508]
gi|190901336|gb|EDV61103.1| Mce family protein [Escherichia coli B7A]
gi|190905227|gb|EDV64866.1| Mce family protein [Escherichia coli F11]
gi|192927029|gb|EDV81652.1| Mce family protein [Escherichia coli E22]
gi|192956381|gb|EDV86841.1| Mce family protein [Escherichia coli E110019]
gi|194412860|gb|EDX29152.1| Mce family protein [Escherichia coli B171]
gi|194421853|gb|EDX37859.1| Mce family protein [Escherichia coli 101-1]
gi|208726679|gb|EDZ76280.1| Mce family protein [Escherichia coli O157:H7 str. EC4206]
gi|208734815|gb|EDZ83502.1| Mce family protein [Escherichia coli O157:H7 str. EC4045]
gi|208742046|gb|EDZ89728.1| Mce family protein [Escherichia coli O157:H7 str. EC4042]
gi|209160565|gb|ACI37998.1| Mce family protein [Escherichia coli O157:H7 str. EC4115]
gi|209758108|gb|ACI77366.1| hypothetical protein ECs4072 [Escherichia coli]
gi|209758110|gb|ACI77367.1| hypothetical protein ECs4072 [Escherichia coli]
gi|209758112|gb|ACI77368.1| hypothetical protein ECs4072 [Escherichia coli]
gi|209758114|gb|ACI77369.1| hypothetical protein ECs4072 [Escherichia coli]
gi|209758116|gb|ACI77370.1| hypothetical protein ECs4072 [Escherichia coli]
gi|209913927|dbj|BAG79001.1| conserved hypothetical protein [Escherichia coli SE11]
gi|215266581|emb|CAS11020.1| predicted ABC-type organic solvent transporter [Escherichia coli
O127:H6 str. E2348/69]
gi|217319720|gb|EEC28145.1| Mce family protein [Escherichia coli O157:H7 str. TW14588]
gi|218353630|emb|CAU99837.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia coli 55989]
gi|218362531|emb|CAR00155.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia coli IAI1]
gi|218367032|emb|CAR04803.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia coli S88]
gi|218371948|emb|CAR19804.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia coli IAI39]
gi|218429047|emb|CAR09993.2| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia coli ED1a]
gi|218433910|emb|CAR14827.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia coli UMN026]
gi|222034910|emb|CAP77653.1| Uncharacterized protein yrbD [Escherichia coli LF82]
gi|238862110|gb|ACR64108.1| predicted ABC-type organic solvent transporter [Escherichia coli
BW2952]
gi|242378736|emb|CAQ33526.1| MlaD, subunit of phospholipid ABC transporter [Escherichia coli
BL21(DE3)]
gi|253323017|gb|ACT27619.1| Mammalian cell entry related domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975036|gb|ACT40707.1| predicted ABC-type organic solvent transporter [Escherichia coli B
str. REL606]
gi|253979192|gb|ACT44862.1| predicted ABC-type organic solvent transporter [Escherichia coli
BL21(DE3)]
gi|254594542|gb|ACT73903.1| predicted ABC-type organic solvent transporter [Escherichia coli
O157:H7 str. TW14359]
gi|257755969|dbj|BAI27471.1| predicted ABC-type organic solvent transporter [Escherichia coli
O26:H11 str. 11368]
gi|257761153|dbj|BAI32650.1| predicted ABC-type organic solvent transporter [Escherichia coli
O103:H2 str. 12009]
gi|257766300|dbj|BAI37795.1| predicted ABC-type organic solvent transporter [Escherichia coli
O111:H- str. 11128]
gi|260447780|gb|ACX38202.1| Mammalian cell entry related domain protein [Escherichia coli DH1]
gi|281180235|dbj|BAI56565.1| conserved hypothetical protein [Escherichia coli SE15]
gi|284923215|emb|CBG36309.1| putative organic solvent tolerance protein [Escherichia coli 042]
gi|290764440|gb|ADD58401.1| hypothetical protein G2583_3918 [Escherichia coli O55:H7 str.
CB9615]
gi|291322616|gb|EFE62045.1| yrbD protein [Escherichia coli B088]
gi|291431978|gb|EFF04961.1| yrbD protein [Escherichia coli B185]
gi|294492705|gb|ADE91461.1| Mce family protein [Escherichia coli IHE3034]
gi|300307893|gb|EFJ62413.1| Mce family protein [Escherichia coli MS 200-1]
gi|300358309|gb|EFJ74179.1| Mce family protein [Escherichia coli MS 198-1]
gi|300403659|gb|EFJ87197.1| Mce family protein [Escherichia coli MS 84-1]
gi|300413897|gb|EFJ97207.1| Mce family protein [Escherichia coli MS 115-1]
gi|300417920|gb|EFK01231.1| Mce family protein [Escherichia coli MS 182-1]
gi|300456872|gb|EFK20365.1| Mce family protein [Escherichia coli MS 21-1]
gi|300462175|gb|EFK25668.1| Mce family protein [Escherichia coli MS 187-1]
gi|300523609|gb|EFK44678.1| Mce family protein [Escherichia coli MS 119-7]
gi|300529850|gb|EFK50912.1| Mce family protein [Escherichia coli MS 107-1]
gi|300846938|gb|EFK74698.1| Mce family protein [Escherichia coli MS 78-1]
gi|301076758|gb|EFK91564.1| Mce family protein [Escherichia coli MS 146-1]
gi|305850030|gb|EFM50489.1| hypothetical protein ECNC101_07604 [Escherichia coli NC101]
gi|307625208|gb|ADN69512.1| hypothetical protein UM146_00415 [Escherichia coli UM146]
gi|308122729|gb|EFO59991.1| Mce family protein [Escherichia coli MS 145-7]
gi|309703619|emb|CBJ02959.1| putative organic solvent tolerance protein [Escherichia coli ETEC
H10407]
gi|312286686|gb|EFR14597.1| mce related family protein [Escherichia coli 2362-75]
gi|312947750|gb|ADR28577.1| putative ABC-type organic solvent transporter [Escherichia coli
O83:H1 str. NRG 857C]
gi|315137779|dbj|BAJ44938.1| hypothetical protein ECDH1ME8569_3082 [Escherichia coli DH1]
gi|315257121|gb|EFU37089.1| Mce family protein [Escherichia coli MS 85-1]
gi|315289008|gb|EFU48406.1| Mce family protein [Escherichia coli MS 110-3]
gi|320174558|gb|EFW49694.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Shigella dysenteriae CDC 74-1112]
gi|320181468|gb|EFW56386.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Shigella boydii ATCC 9905]
gi|320186680|gb|EFW61404.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Shigella flexneri CDC 796-83]
gi|320189546|gb|EFW64205.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Escherichia coli O157:H7 str. EC1212]
gi|320194678|gb|EFW69308.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Escherichia coli WV_060327]
gi|320202107|gb|EFW76682.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Escherichia coli EC4100B]
gi|320640264|gb|EFX09836.1| hypothetical protein ECO5101_09911 [Escherichia coli O157:H7 str.
G5101]
gi|320645561|gb|EFX14570.1| hypothetical protein ECO9389_08047 [Escherichia coli O157:H- str.
493-89]
gi|320650871|gb|EFX19328.1| hypothetical protein ECO2687_14299 [Escherichia coli O157:H- str. H
2687]
gi|320656252|gb|EFX24164.1| hypothetical protein ECO7815_18889 [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320661942|gb|EFX29350.1| hypothetical protein ECO5905_12733 [Escherichia coli O55:H7 str.
USDA 5905]
gi|320666777|gb|EFX33756.1| hypothetical protein ECOSU61_06580 [Escherichia coli O157:H7 str.
LSU-61]
gi|323162885|gb|EFZ48720.1| mce related family protein [Escherichia coli E128010]
gi|323178631|gb|EFZ64207.1| mce related family protein [Escherichia coli 1180]
gi|323941707|gb|EGB37886.1| hypothetical protein ERDG_01482 [Escherichia coli E482]
gi|323951288|gb|EGB47163.1| hypothetical protein ERKG_01931 [Escherichia coli H252]
gi|323957660|gb|EGB53374.1| hypothetical protein ERLG_00986 [Escherichia coli H263]
gi|323966373|gb|EGB61807.1| hypothetical protein ERJG_02305 [Escherichia coli M863]
gi|323979090|gb|EGB74168.1| hypothetical protein ERFG_00083 [Escherichia coli TW10509]
gi|324008705|gb|EGB77924.1| Mce family protein [Escherichia coli MS 57-2]
gi|324012163|gb|EGB81382.1| Mce family protein [Escherichia coli MS 60-1]
gi|324119558|gb|EGC13440.1| hypothetical protein ERBG_00586 [Escherichia coli E1167]
gi|326337893|gb|EGD61727.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Escherichia coli O157:H7 str. 1125]
gi|326347463|gb|EGD71188.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Escherichia coli O157:H7 str. 1044]
gi|327251284|gb|EGE62973.1| mce related family protein [Escherichia coli STEC_7v]
gi|330909245|gb|EGH37759.1| uncharacterized ABC transporter, periplasmic component YrbD
[Escherichia coli AA86]
gi|331037362|gb|EGI09586.1| VpsC [Escherichia coli H736]
gi|331048179|gb|EGI20256.1| VpsC [Escherichia coli M718]
gi|331054062|gb|EGI26091.1| VpsC [Escherichia coli TA206]
gi|331058054|gb|EGI30036.1| VpsC [Escherichia coli TA143]
gi|331062933|gb|EGI34847.1| VpsC [Escherichia coli TA271]
gi|331073337|gb|EGI44660.1| VpsC [Escherichia coli H591]
gi|331078455|gb|EGI49661.1| VpsC [Escherichia coli H299]
gi|332086232|gb|EGI91390.1| mce related family protein [Shigella boydii 5216-82]
Length = 183
Score = 86.5 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|283779913|ref|YP_003370668.1| mammalian cell entry-like domain-containing protein [Pirellula
staleyi DSM 6068]
gi|283438366|gb|ADB16808.1| Mammalian cell entry related domain protein [Pirellula staleyi DSM
6068]
Length = 396
Score = 86.5 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/362 (10%), Positives = 98/362 (27%), Gaps = 8/362 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VG+ V+ + + L EV + P G++ + VR
Sbjct: 1 MDERTLRFRVGVVVLIAAIITGILVTRLGDMPFPGTSTYEVSVLFPT-APGVTVGTPVRK 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-- 118
+G+ +GR+ + L + P+ I + S I T + G +E
Sbjct: 60 SGVSIGRVTQVELMK--PSGVRVSTDIDSRYVILDSELCRIATASVLGDAVLEFVPGNAV 117
Query: 119 -KEKKTIFQIATERNQRAMITATPSGIN--YFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + +N +N + A + ++ S+ + +
Sbjct: 118 VANPQQLTDGSEIQNGVVAGNPLDVLVNLETDMRIALRSIQEASNRVGQTASNLNAVVAN 177
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + + + + ++T P D + + ++
Sbjct: 178 NDDQLPRLFQKTEKALDQFNTTMSTINTVFGDPELRDGMKQSLNDVPKLLAEARVTLQNA 237
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + N + + + ++ LL
Sbjct: 238 NEAFEGFKSVSERADRNLANLENFTKPLGERGGQIAENLDGSLSNVNQLLEQLVEFTDGL 297
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + + ++ + I I I S+ + +
Sbjct: 298 NSREGTLGRLMNDGELYDRLNRTLANAEDITSRIKPILDDVRIFSDKIARDPRQLGVKGA 357
Query: 356 IN 357
I+
Sbjct: 358 ID 359
>gi|163803755|ref|ZP_02197612.1| putative ABC superfamily transport protein [Vibrio sp. AND4]
gi|159172439|gb|EDP57308.1| putative ABC superfamily transport protein [Vibrio sp. AND4]
Length = 165
Score = 86.5 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKTELWVGSFVLAGICAILVMIFQVADVKSIGSGNTYTLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +GR+ + LD + I +++ I T GL G YI L
Sbjct: 64 VVIGRVSSIALDTDSLLPV-VNLSINSQYNQFPETSSVQILTSGLIGEQYIGLVPGFVFD 122
Query: 122 KTIFQIATER 131
+ +
Sbjct: 123 DEEMLVDGDT 132
>gi|148265725|ref|YP_001232431.1| hypothetical protein Gura_3705 [Geobacter uraniireducens Rf4]
gi|146399225|gb|ABQ27858.1| Mammalian cell entry related domain protein [Geobacter
uraniireducens Rf4]
Length = 349
Score = 86.5 bits (211), Expect = 9e-15, Method: Composition-based stats.
Identities = 40/364 (10%), Positives = 113/364 (31%), Gaps = 23/364 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG+F V + + + + S+ GL VR G+ VG+I
Sbjct: 8 KVGIFFVMGMVVL-GVMLEVGEKWNPFEKKVLYKTYLT-SITGLKVGDPVRLAGVDVGKI 65
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + E ++P T + T A +R L G ++ LS +
Sbjct: 66 DKITILDE---KIQIDFEVKPGTKIKTDTVAGLRLTNLLGGQFLGLSFGSPNAPLLPPGG 122
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
T R + ++ ++ I++ +++ +++ I L N+
Sbjct: 123 TVRGRDVANID--VIVDNMSDLTKDAKILITELNKNQNEVMGKISSILDDNRENLRNSIA 180
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
L++ D+ + + + + T + ++ I + + ++
Sbjct: 181 NLSSITDKFDRGEGSLAMLLNDKVLYANASEATTSLKNITAKIDRGEGTMGKLVNDD--- 237
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
D + + + + + + + + + + + +
Sbjct: 238 -------------ALYTDSKAAVASLNDSMKDVKEIAAKINRGDGTMGKLINDQALYNEV 284
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ +I I + + + + +N+ + + +K + M + + ++ S
Sbjct: 285 RDASRNIKEITRKINDGEGTLGKLVNEDNLYRDTTAALKKAEKAMDGLGDTGPIQVLGSA 344
Query: 369 FKDA 372
Sbjct: 345 IGTL 348
>gi|268316274|ref|YP_003289993.1| Mammalian cell entry related domain-containing protein
[Rhodothermus marinus DSM 4252]
gi|262333808|gb|ACY47605.1| Mammalian cell entry related domain protein [Rhodothermus marinus
DSM 4252]
Length = 362
Score = 86.1 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 3/109 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VGL ++ + +++ ++ + + R V GL + V+F G+
Sbjct: 2 SREARVGLLALAGIALFVIALFAIANRSFLLSDTFLLRARFNR-VAGLVPGAPVQFQGVN 60
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
VGR+ + L E I+ + ++ T A I+++GL G
Sbjct: 61 VGRVESVQLPPEPGGQIEVTMAIKEEARRVIHVRTQAQIKSEGLVGQQI 109
>gi|91212618|ref|YP_542604.1| hypothetical protein UTI89_C3629 [Escherichia coli UTI89]
gi|237706055|ref|ZP_04536536.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|254038358|ref|ZP_04872416.1| mce family protein [Escherichia sp. 1_1_43]
gi|293412564|ref|ZP_06655287.1| yrbD protein [Escherichia coli B354]
gi|301025905|ref|ZP_07189392.1| Mce family protein [Escherichia coli MS 196-1]
gi|91074192|gb|ABE09073.1| hypothetical protein YrbD precursor [Escherichia coli UTI89]
gi|226839982|gb|EEH72003.1| mce family protein [Escherichia sp. 1_1_43]
gi|226899095|gb|EEH85354.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|291469335|gb|EFF11826.1| yrbD protein [Escherichia coli B354]
gi|299879927|gb|EFI88138.1| Mce family protein [Escherichia coli MS 196-1]
gi|332102328|gb|EGJ05674.1| conserved hypothetical protein [Shigella sp. D9]
Length = 188
Score = 86.1 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 6 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 66 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 124
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 125 DPELGTAILKDGDTIQDTKSAMVLED 150
>gi|226349634|ref|YP_002776748.1| putative Mce family protein [Rhodococcus opacus B4]
gi|226245549|dbj|BAH55896.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 334
Score = 86.1 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 37/289 (12%), Positives = 96/289 (33%), Gaps = 8/289 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + +FV+ F + G S GL + S VR
Sbjct: 1 MTKTSPSLKLLIFVLVTTLTGFGVATVVGNLR--FGSTHAYSAVFT-SASGLGSGSDVRV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P+G++ + ++ + +L + + PL +T A I+ + L G Y++LS +
Sbjct: 58 AGVPMGKVTDVSVNSD--GTALVTFSLSTERPLTAATEAKIKYKNLIGDRYVDLSPGSFD 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A + + + + S + +++ E ++ I
Sbjct: 116 PSPLQAPIPLAQTTAALDLDQVVNGFRPLLQGLDPDQTNQLSASLIQVLNGQEASISQLI 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I+T + LA+ I +++ + N + + + A +
Sbjct: 176 SQIDTFTNALADRDQAIGQVI---ANFNAVLGTVNNRRDQFATLVDQLQQLVAGLNDDRD 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I ++ + + + + + ++ +++ +
Sbjct: 233 LISHSLGQIDDASNAMATVLTENRPPIAQDVSALGDLAGQLNAQTDTVN 281
>gi|270264504|ref|ZP_06192770.1| hypothetical protein SOD_h01710 [Serratia odorifera 4Rx13]
gi|270041640|gb|EFA14738.1| hypothetical protein SOD_h01710 [Serratia odorifera 4Rx13]
Length = 546
Score = 86.1 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 48/404 (11%), Positives = 110/404 (27%), Gaps = 37/404 (9%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ + L S V + +PVGRI L+ + + I D P T R
Sbjct: 161 VVQTDDLGSLDIGSPVYYRRVPVGRIASYQLNADGKS---VSLQIFIDAPYDRFVTPNSR 217
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
+G+ + + + SG + E
Sbjct: 218 FWNASGLDVSVGANGFRLRTQTVAAIMAGGIAFATPENASGASPVGPKGEYVL------- 270
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+ + A + + V S + D
Sbjct: 271 ---------AKDQESALAAPDGPPMRFKLRFERSLHGLEVGAAVEFSSIKIGRVVSVDLD 321
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + ++ L N+ K Q + T+ E G +
Sbjct: 322 YSPQGYRFPSVVGIEVYPNRLGNV------LSKLPKQNRGLEQETAAFTRDLVEHGLRAQ 375
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
S+ + + N A ++ + + I ++ I +I + +
Sbjct: 376 ATPSNLLTGQLYISLDF-VPNAARVPFDIHARPLVLPTINGGFDRLQEQIASIVSKVDKM 434
Query: 343 --NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+Q ++ ++N +L A + + T++ + + F
Sbjct: 435 PLASIAQNLNATLAGVDNSLKQVNGQTLPA-ANQLLRQMSQTAQTAQDLLAEDSPLMLTF 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
SQS +++ + + + +R+P+ ++ GR +
Sbjct: 494 SQS--------LQEALRALRAVRNLADQLDRHPESLLQGRTEDP 529
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPD 90
DGP +R S+ GL ++V F+ I +GR+V + LD + S+ + P+
Sbjct: 282 DGPPMRFKLRFERSLHGLEVGAAVEFSSIKIGRVVSVDLDYSPQGYRFPSVVGIEVYPN 340
>gi|330501881|ref|YP_004378750.1| hypothetical protein MDS_0967 [Pseudomonas mendocina NK-01]
gi|328916167|gb|AEB56998.1| hypothetical protein MDS_0967 [Pseudomonas mendocina NK-01]
Length = 156
Score = 86.1 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLMAGVLALLLLALRVSGLSVGSAGDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD++ + + L +TA+I T GL G YI +S
Sbjct: 61 AGVSIGKVTAIDLDRDSYMG-RVTLELDGNVNNLPEDSTASILTAGLLGEKYIGISVG 117
>gi|194434471|ref|ZP_03066731.1| Mce family protein [Shigella dysenteriae 1012]
gi|194417250|gb|EDX33359.1| Mce family protein [Shigella dysenteriae 1012]
Length = 188
Score = 86.1 bits (210), Expect = 9e-15, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 6 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 66 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 124
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 125 DPELGTAILKDGDTIQDTKSAMVLED 150
>gi|260914438|ref|ZP_05920907.1| toluene tolerance efflux ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
gi|260631539|gb|EEX49721.1| toluene tolerance efflux ABC superfamily ATP binding cassette
transporter, binding protein [Pasteurella dagmatis ATCC
43325]
Length = 168
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 2/114 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + I ++ GL + ++ G+ +G
Sbjct: 8 EFWVGLFLLLGIGALVFLGLKVANIQGFSEAKSYKIYATFENIGGLKVRAPLKVGGVVIG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
R+ + L+++ + + I + ++ +I+T GL G YI LS
Sbjct: 68 RVADISLNEKTYSP-MVTIAIDERYHEIPETSALSIKTSGLLGEQYIALSIGFD 120
>gi|183984952|ref|YP_001853243.1| MCE-family protein Mce4D [Mycobacterium marinum M]
gi|183178278|gb|ACC43388.1| MCE-family protein Mce4D [Mycobacterium marinum M]
Length = 477
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 91/283 (32%), Gaps = 11/283 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+V+++ +Y L + ++ S G+ VR G+PVGRI +
Sbjct: 16 IVALVAALVGGLYVLFSGGESGRK----VVAYFTSAVGIYPGDEVRILGVPVGRIDSIEP 71
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ D + A I + L +I+L+ + + A+
Sbjct: 72 RPAD---VKITMSVSNDVKIPRDAQALIVSPNLVAARFIQLTPVYTGGAVLPDGASIDLS 128
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R A P + + + ++S ++ +Q + T+
Sbjct: 129 RT---AIPVEWDEVKESLTQLAVQLSPAAGELQGPLGAAINQAADTLNGNGDSFHNALRE 185
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN-IQVSSNN 252
+S + + ++ S+ ++ + A + V+Q+L + + N
Sbjct: 186 LSQVAGRLGDSRNDIFSTVKNLQVLVDALSQSNEQIVQFAGHVASVSQVLADSSRNLDNT 245
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + +RE T E ++ L S + +
Sbjct: 246 LGTLNQALSDIKGFLRENNSTLIETVNQLGDLTQTLSDQSDNI 288
>gi|42524772|ref|NP_970152.1| ABC transporter substrate binding protein [Bdellovibrio
bacteriovorus HD100]
gi|39576982|emb|CAE78211.1| ABC transporter substrate binding protein [Bdellovibrio
bacteriovorus HD100]
Length = 271
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/272 (14%), Positives = 82/272 (30%), Gaps = 5/272 (1%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
MES VG+F+ +F +I+ L V V GL+ S V
Sbjct: 1 MESHFGTQIKVGIFLTIGIFLILATIFMLGADKALFTSYVRVHAHF-DQVQGLAVGSVVS 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTL 117
+G+ VG + + E N K I D + + IRTQG G ++ +
Sbjct: 60 LSGVTVGNVETITFLPE-KNSLDVKMKINEDYIDRIRQGSQVEIRTQGALGDKFVFIIPG 118
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+++ + + +N H + + K +
Sbjct: 119 DPRAESLKEGDILEVAKPTDFLGIVSERGNETNKIFDIINELYKITHAMNVENRMGKIMA 178
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
S ++ + +M + + ++ + + I+
Sbjct: 179 NLETASTNFSQTSKDSQRFVAQMNAHGGGEKLGKSIEKLDSILSKIDRGEGSLGALINDP 238
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
++ L+N+ SN + ++ +
Sbjct: 239 SIHNRLKNMLGGSNRKNHVESLLRTSIEKETK 270
>gi|15828394|ref|NP_302657.1| putative secreted protein [Mycobacterium leprae TN]
gi|221230871|ref|YP_002504287.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|13093824|emb|CAC32122.1| putative secreted protein [Mycobacterium leprae]
gi|219933978|emb|CAR72690.1| putative secreted protein [Mycobacterium leprae Br4923]
Length = 346
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 48/128 (37%), Gaps = 4/128 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +F + +L F+ I + G ++ GL T VR
Sbjct: 1 MKLTGTVVRLSIFSLVLLLFTVMIIVVFGQMR--FGRTNGYTAEFT-NISGLRTGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ + L K + PLY STTA IR L G Y+EL +
Sbjct: 58 SGVEVGKVNSVALI-NGGTRVRVKFNVDRSVPLYQSTTAQIRYLDLIGNRYLELKHGEGQ 116
Query: 121 KKTIFQIA 128
A
Sbjct: 117 GSEKIMPA 124
>gi|260426966|ref|ZP_05780945.1| mammalian cell entry related protein [Citreicella sp. SE45]
gi|260421458|gb|EEX14709.1| mammalian cell entry related protein [Citreicella sp. SE45]
Length = 701
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/422 (9%), Positives = 111/422 (26%), Gaps = 15/422 (3%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALI 87
S ++ ++++ SV GL SSV + G+ VG + G+ + K
Sbjct: 285 SVFSETLDNAVDLVVEFDESVRGLEAGSSVTYRGLKVGSVTGIGAFIDDTSGRQQVKLRA 344
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
Q E + Q N + P
Sbjct: 345 SIQIDPRSLGLDADAPQAETIRFLSEAVQDGLRARLASQGLFSSNLMIELAEIPDAAPAA 404
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + + + + + + E A + + +
Sbjct: 405 LGIFDTEAPVLPSVASDLPDVAATAEGLFKRVDNLPVEELMEQAVATLRAIESFASDENL 464
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + D++ + + ++ T+
Sbjct: 465 RSVPGAVTGLLDDARGVIGSDEVQALPGELNATVLELRGIIEDLRTADLVGKLAETLESA 524
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
T V + S+ + ++ N D + + + +
Sbjct: 525 TAAADTVTGVADDLSGATSEVPALVEDFRQLVEKANSLDLEGFVSEASALLDSADRLIDS 584
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
+ + ++ D+ + +++++ ++ N+ A A + ++ +
Sbjct: 585 -----DDARALPGSIGDALDEIRAVLAELREGGVVENANATLASASDAAAAIEEAAQSLP 639
Query: 388 RYIPSIGNNLQNF---------SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
I + + + S + +R+++E ERNP +++
Sbjct: 640 SLSARIESLVSEAEVAVRGYGENSSFNRETVAALREVREAAEALTKLARQIERNPNSLLF 699
Query: 439 GR 440
GR
Sbjct: 700 GR 701
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/387 (7%), Positives = 89/387 (22%), Gaps = 8/387 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LS + + G+ VGRI L A D + +T +G
Sbjct: 177 LSAGAPILHQGVEVGRIETPRLLDSGKGVIADAFIEAPHDKRITTATRFW----NTSGFN 232
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + + + + ++
Sbjct: 233 VNFGPGGLDLSVGSLSSLLRGGVAFDTVFSGGSPVGSRYVFDLFDDEGAARDSVFSETLD 292
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
N + ++ + + + T S + I +
Sbjct: 293 NAVDLVVEFDESVRGLEAGSSVTYRGLKVGSVTGIGAFIDDTSGRQQVKLRASIQIDPRS 352
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + + + + +++ + D +
Sbjct: 353 LGLDADAPQAETIRFLSEAVQDGLRARLASQGLFSSNLMIELAEIPDAAPAALGIFDTEA 412
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ S + A + + + E ++ NL
Sbjct: 413 PVLPSVASDLPDVAATAEGLFKRVDNLPVEELMEQAVATLRAIESFASDENLRSVPGAVT 472
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI--NRYIPSIGNNLQNFSQSGLNDI 408
L+ + E +L + + R E + + + L++ + + + +
Sbjct: 473 GLLDDARGVIGSDEVQALPGELNATVLELRGIIEDLRTADLVGKLAETLESATAAA-DTV 531
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQD 435
+ L + + +F + +
Sbjct: 532 TGVADDLSGATSEVPALVEDFRQLVEK 558
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 33/439 (7%), Positives = 106/439 (24%), Gaps = 32/439 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + + + + I + G+ +S+R+ + +G + +
Sbjct: 30 ILALAVTLGIAWK-----SFSERGSRIEITF-ENAAGIVAGETSIRYRDVDIGVVEDVAF 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + L KA + + L + ++ L+T+ +
Sbjct: 84 SSDLTS-VLVKARVDNNVASSLPDDAQFWVVRPEVSASGITGLNTVLSGVYLEAAFEPQA 142
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI----- 186
A E T + ++ + I
Sbjct: 143 GAEATRFTGLDSAPLVKPGMEGTRIVLRAANGSMLSAGAPILHQGVEVGRIETPRLLDSG 202
Query: 187 ----STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ T + + + SL +++
Sbjct: 203 KGVIADAFIEAPHDKRITTATRFWNTSGFNVNFGPGGLDLSVGSLSSLLRGGVAFDTVFS 262
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ S F D+ ET ++ + D + + +
Sbjct: 263 GGSPVGSRYVFDLFDDEGAARDSVFSETLDNAVDLVVEFDESVRGLEAGSSVTYRGLKVG 322
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
++ + + + + +I ++ + + A
Sbjct: 323 SVTGIGAFIDDTSGRQQVKLRASIQIDPRSLGLDADAPQAETIRFLSEAVQDGLRARLAS 382
Query: 363 K-----ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN--------DIQ 409
+ + A + +PS+ ++L + + + ++
Sbjct: 383 QGLFSSNLMIELAEIPDAAPAALGIFDTEAPVLPSVASDLPDVAATAEGLFKRVDNLPVE 442
Query: 410 NLVRKLQETVNHFDDCLNN 428
L+ + T+ + ++
Sbjct: 443 ELMEQAVATLRAIESFASD 461
>gi|312890494|ref|ZP_07750030.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
gi|311296952|gb|EFQ74085.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
Length = 265
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/125 (18%), Positives = 41/125 (32%), Gaps = 2/125 (1%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M++ +G+F + F +I+ + V +V GL ++VR
Sbjct: 1 MKTTTGQKLKIGIFTAIGILILFVAIFLIGSQKNLFSSTYRVHGVFK-NVGGLQVGNNVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI VG + G+ + + + +I T G G I +S
Sbjct: 60 LAGINVGVVEGIQILTDTSVRVDLTLNTSVQKFVKTDAKLSIGTDGFIGDKLITISPGGA 119
Query: 120 EKKTI 124
I
Sbjct: 120 TTTQI 124
>gi|271964520|ref|YP_003338716.1| resistance to organic solvents ABC transporter periplasmic
component-like protein [Streptosporangium roseum DSM
43021]
gi|270507695|gb|ACZ85973.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component-like protein
[Streptosporangium roseum DSM 43021]
Length = 340
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 96/292 (32%), Gaps = 5/292 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T VGL ++IL + + + +G + +P S GL + + VR G+PV
Sbjct: 10 NKTVVGLVSMAILASVLVATFLVGNLGLLEG-GYTMSAILPDSA-GLRSGNDVRVAGVPV 67
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + D H + + L P T A I L G Y++L+
Sbjct: 68 GKVTEVRADY-GQGHVVVTWKVDDGIRLGPQTRAEITLSNLLGGRYVKLTGPVTRPYMDE 126
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI--QKIIENIEKPLTTTIANI 183
R T+TP I + +A +K+ S ++ E +
Sbjct: 127 LPEERRRIPMSRTSTPVLITDALKDATRLVQKLDTDSVDKLLSELAELKPARKGRVSKLL 186
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ I + ++ + T + + +++ + + +++
Sbjct: 187 DNIGELSEIISESEPQLQRLLDNGNKIMNVLETKDAQLGRLIDSIEIMLSELRLRRDELK 246
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ S+ + V ++ +G ++D +S +
Sbjct: 247 SLLGDGSDLVNSITALVTEHEKNLIAVVDDVTAIGNRLDGNGKALNSVLAWV 298
>gi|145588287|ref|YP_001154884.1| hypothetical protein Pnuc_0098 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145046693|gb|ABP33320.1| Mammalian cell entry related domain protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 160
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 54/153 (35%), Gaps = 3/153 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VG+FV L + F + N P ++ R ++ GL + V+
Sbjct: 1 MRKSAIDIWVGIFVAIGLLAALFLALKVGNMNAVSFAPTYKITARF-DNIGGLKPRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGRI + D + + I ++A I T GL G YI L
Sbjct: 60 SAGVVVGRIANISFD-DKTYQATVVMTIEDAYRFPKDSSAKILTSGLLGEQYIGLEAGGS 118
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + Q A++ + + A+
Sbjct: 119 DDMLAEGGKITQTQSAIVLESLISQFLYNKAAD 151
>gi|220934668|ref|YP_002513567.1| Mammalian cell entry related domain protein [Thioalkalivibrio sp.
HL-EbGR7]
gi|219995978|gb|ACL72580.1| Mammalian cell entry related domain protein [Thioalkalivibrio sp.
HL-EbGR7]
Length = 335
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 82/289 (28%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ Y +GLF+ + + + L P + GSV GL ++V+
Sbjct: 1 MNSRASYFRLGLFITAAVGAGIVILVVLG-IGNLFRPKVLLETYFDGSVQGLDVGAAVKL 59
Query: 61 NGIPVGRIVGLFLDQ----------EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ +G + + + + + L +A+IRPD T
Sbjct: 60 RGVTIGEVSYIGFTRGRYEQDVMPMDQRQYVLVEAVIRPDRLSPSGRIPTPEMVQTMVDR 119
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + I + + A P + ++ ++ I
Sbjct: 120 GLRVRMTAFGVTGINFLELDFMDPAEFPPIPIDWTPENLYVPSAPGAVTQFIQYADNIAR 179
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+++ +I + V + D+ T + + +
Sbjct: 180 RLDRMDVESIVDNMNRLLVNLDTTVSAVDAPRINAQMIQLLDALATSLERLNRVIASPAF 239
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
V S F ++ + + T+ + T + +
Sbjct: 240 DDIPTDLGVAAANLRALSESPRFDETMNALEMTIKRLEGTVVDVESMVS 288
>gi|82778507|ref|YP_404856.1| hypothetical protein SDY_3374 [Shigella dysenteriae Sd197]
gi|309785521|ref|ZP_07680152.1| mce related family protein [Shigella dysenteriae 1617]
gi|81242655|gb|ABB63365.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|308926641|gb|EFP72117.1| mce related family protein [Shigella dysenteriae 1617]
Length = 183
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|189426291|ref|YP_001953468.1| hypothetical protein Glov_3242 [Geobacter lovleyi SZ]
gi|189422550|gb|ACD96948.1| Mammalian cell entry related domain protein [Geobacter lovleyi SZ]
Length = 555
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/399 (9%), Positives = 111/399 (27%), Gaps = 23/399 (5%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATI 101
+ + L+ S + + + VG +V LDQ+ D + +T
Sbjct: 174 VLHADDLGSLNVGSPIFYRHLQVGEVVSNELDQDGETILLRIFVRAPYDKYVRQNTRFWH 233
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + + ++ +
Sbjct: 234 ASGIDFSLDANGVKINTESLLSVMMGGIAFQTPEDFEEYQQAEQNRHFTLFENREVA--- 290
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ T+ + + V
Sbjct: 291 -----------------IKSPDSTVENYRLLFSESVRGLTVGAPVDLRGITVGEVTKIKA 333
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
++ + K+I A+ ++ + ++ ++++ + D V++ + + G +
Sbjct: 334 EIDPASKKVIMAVQIRFYPERVKPRSGATSDQRATVDSRKLLDAMVKQGFRAQLKSGNLL 393
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
L T+ + S A + + + +E + +
Sbjct: 394 TGQLYVALDFFPGVPTARIDWHGNPPVLPTVSGNMAQLQASLTQIVQKLERLPLEELAGD 453
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ Q + + + + S+ + + M R T + N+ + + + +
Sbjct: 454 ARKTVQTLDTTLKSADKLLKNIDT-SVVPETRLMMEDVRKTLDGANKALAEVKQTMSADA 512
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ D+++ +R+L + ERNP+ ++ G+
Sbjct: 513 PLQV-DLRDTLRELGRAAQSLRVLGDYLERNPEALLRGK 550
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--FLDQEYPNHSL-AKALIRPDTPLYPS 96
+ SV GL+ + V GI VG + + +D + + P+ S
Sbjct: 300 NYRLLFSESVRGLTVGAPVDLRGITVGEVTKIKAEIDPASKKVIMAVQIRFYPERVKPRS 359
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + ++ + + + Q
Sbjct: 360 GATSDQRATVDSRKLLDAMVKQGFRAQLKSGNLLTGQ 396
>gi|149186603|ref|ZP_01864915.1| ABC-type transport system periplasmic component [Erythrobacter sp.
SD-21]
gi|148829830|gb|EDL48269.1| ABC-type transport system periplasmic component [Erythrobacter sp.
SD-21]
Length = 316
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 3/110 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+ ++ V V ++ + WL I+ SV+GL + S+V
Sbjct: 1 METNANFSLVAWIVGILMLTTIAFAMWLIDPRP---NQETYQIKFDRSVEGLQSGSTVTL 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+G+PVG++ + L + P + + + P ATI T + G
Sbjct: 58 SGVPVGQVTSVRLAENEPENVVVVLTLDPSAAKVHGLEATISTDLITGEA 107
>gi|108800636|ref|YP_640833.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119869775|ref|YP_939727.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771055|gb|ABG09777.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119695864|gb|ABL92937.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 341
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/299 (11%), Positives = 89/299 (29%), Gaps = 9/299 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+++ T + + ++ + +L S+ G + L SVR G
Sbjct: 2 TRSTGTLIKFLIFGVIMVVLTAFLFLVFSDSRTGATEKYSAVF-EDASRLKAGESVRIAG 60
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I VG + + L + + + +T L ST A IR L G Y+EL +
Sbjct: 61 IRVGTVKSVSLRAD--RKVVVEFDTDKNTKLTTSTKAAIRYLNLVGDRYVELIDSPGSTR 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPL 176
+ + R + + E+ + + + +Q ++
Sbjct: 119 ILPAGSEIPLARTAPALDLDVLLGGLKPVIRGLNPEDVNGLTTSLVQILQGQGGTLDSLF 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ + + +++ ID++ + + D + +
Sbjct: 179 SKSSSFTNSLADNNQVIEQLIDELRTLLDTLSKDGEEFSGAIDRLDQLIEGLAADRDPIG 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ ++ + NT+ + ++D L +
Sbjct: 239 TAIEALDNGTSSLADLLGRARPPLNNTIDQLNRLAPLLNTDLPRLDATLQRLPEIYRKL 297
>gi|149277773|ref|ZP_01883913.1| ABC transporter, permease component [Pedobacter sp. BAL39]
gi|149231461|gb|EDM36840.1| ABC transporter, permease component [Pedobacter sp. BAL39]
Length = 332
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/323 (9%), Positives = 87/323 (26%), Gaps = 2/323 (0%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+VG+FV L I+ L + V + + GL ++V F+G+ +
Sbjct: 8 RKITVGIFVFLGLAIFILGIFTLGGQKKTFVQSFTVDVIF-NDIQGLKAGNNVWFSGVKI 66
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G I + + ++ TA+I + GL G I ++ + +
Sbjct: 67 GTIKKIQFFGTSQVQVFLNIEEEANKYIHKDATASITSDGLIGNKIIVVTGGSTKMPFVE 126
Query: 126 QIA-TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + N + + S+++ + L
Sbjct: 127 DGDRLQASNILSTDDIMKTFQVNNKNLVDVTADFKILSKNLVEGKGAAGALLADQQIADN 186
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ V + Q+ ++ L+T + Q
Sbjct: 187 FKAIVANLKNTSESANRMAVQLNTFTNTLNTKGGLADKLLTDTSVFNQLQASVDQLQKTA 246
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
N + + + + + + +++ ++++ K + +
Sbjct: 247 NSASALTENLNKASAKLTQSDNAAGLLINDPKTAEQVKSIMNNLDGSTKKLDENMEALQH 306
Query: 305 ADSTSNMRSSISAIREITDQRQK 327
+ +++
Sbjct: 307 NFLLRGFFKKRAKEEAKANEKNN 329
>gi|329113575|ref|ZP_08242355.1| Hypothetical protein APO_0348 [Acetobacter pomorum DM001]
gi|326697097|gb|EGE48758.1| Hypothetical protein APO_0348 [Acetobacter pomorum DM001]
Length = 318
Score = 86.1 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/304 (11%), Positives = 84/304 (27%), Gaps = 15/304 (4%)
Query: 1 MESKNY-YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M T +G FV+ F I ++ P E + S+ GLS + V
Sbjct: 1 MSQSTNRKTLIGAFVILGGLLGLFIIMAFGHM-RFFTPSREAAVVFQNSITGLSVGAPVN 59
Query: 60 FNGIPVGRIVGL--FLDQ-EYPNHSLAKALIRPDTP-----LYPSTTATIRTQGLAGITY 111
F G+ VG + + D + + + PD + T +I+ G+
Sbjct: 60 FRGVKVGTVKNITLRFDPQDRKAYIPVVLTLEPDQIHVVRDVPGGTKVSIQEMISNGLRA 119
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
++ I + ++ P + ++ + + I +
Sbjct: 120 ELNLQSFVTGQS--NIELDFDKSVTPVLHPRITDLPEIPVRLSTMEKLKDTIGQIPIKDI 177
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
++ + + I + T + + + + +
Sbjct: 178 SHHADLALLSITSLSDHLRDDLPPLISSVKETADRSHETVQAATDAIKDLQAKLDVTLLK 237
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ N + + + T+ +++ +D L D ++
Sbjct: 238 MDKLMDTGNT---QLDARGKDLHATLASATKTLDSLQDILSPRSIDRANLDASLRDIAAA 294
Query: 292 MKSK 295
S
Sbjct: 295 AASL 298
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 63/203 (31%), Gaps = 12/203 (5%)
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ +F KS V++ +K+ + K S
Sbjct: 124 QSFVTGQSNIELDFDKSVTPVLHPRITDLPEIPVRLSTMEKLKDTIGQIPIKDISHHADL 183
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
L +I + ++R I+ ++ + T++ T + D K + K++ +
Sbjct: 184 ALLSITSLSDHLRD--DLPPLISSVKETADRSHETVQAATDAIKDLQAKLDVTLLKMDKL 241
Query: 360 SALKENN--SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+ KD + + T + + + ++ +R +
Sbjct: 242 MDTGNTQLDARGKDLHATLASATKTLDSLQDILSP--------RSIDRANLDASLRDIAA 293
Query: 418 TVNHFDDCLNNFERNPQDIVWGR 440
++ ERNPQ ++ GR
Sbjct: 294 AAASLRGFASDVERNPQLLLMGR 316
>gi|299141382|ref|ZP_07034519.1| mce related protein [Prevotella oris C735]
gi|298577342|gb|EFI49211.1| mce related protein [Prevotella oris C735]
Length = 299
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 88/283 (31%), Gaps = 6/283 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ + + + FF + +L + + + GLS+ + + +G VG
Sbjct: 6 EIKIAIVAIVGILVLFFGLNFLKGMTLFSNDNTYYVS--FKDISGLSSSNPIYADGYKVG 63
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D + L + + D + ++A I + + I L ++
Sbjct: 64 VVKRIQYDYDKGGDILVQINVDQDLRIPKGSSAEIESDIMGNIKMNLLLANNPRERVNPG 123
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + + + E KI ++ ++ N + T
Sbjct: 124 ETMIGSTKNGLMGKVA---SLVPTVEVMLPKIDSILTNLNALLANPALAQSLQNIEGITG 180
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + ++ V + +L ++ A + +V+Q + N+
Sbjct: 181 NLKTTSKQLNVLMADLNKNVPGLLHKANGVLTNADKFTGNLARVDVAGTMSQVDQTIANL 240
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ ++ + +HD + + D LL +
Sbjct: 241 KDFTHQLNSREGSLGLLMHDP-TLYNNMNKTMRSADSLLINVR 282
>gi|158335469|ref|YP_001516641.1| hypothetical protein AM1_2317 [Acaryochloris marina MBIC11017]
gi|158305710|gb|ABW27327.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 399
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 51/414 (12%), Positives = 120/414 (28%), Gaps = 21/414 (5%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ +VGL V+ L I+W+ N + G + + + GLS S +
Sbjct: 1 MRTRAVREGTVGLLVIFGLGLVTSLIFWVRGFN-FGGRAYTLQVEL-ADALGLSIGSPAK 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLR 118
F G+ VG I + + + I + T G G +E
Sbjct: 59 FRGVKVGHITQMRPQAN---RVVVEVEITSSTVLIPRQTKVETSQSGFVGQAALEFRPTE 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
E + ++ + +Q + L
Sbjct: 116 VEFSDASVEDLSPFEPDCDPRM-ILCQGDRLEGDSGNNLEELIRATMQIATQLGGTDLKA 174
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T+ N+ S ++ + S + +
Sbjct: 175 TLNNLSQASKDISKLSKDTKVALKDVSRAARSVTQLSL----------DTRKQLRQFGVA 224
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ Q + + V + + Q QE Q++ +++ S + E
Sbjct: 225 AESVTAAAQQFDQLGGEVNTLVKGNKGTLVTSLQNLQETSQELKVVVTRLSPLLSRVEQG 284
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
L+N+ +N + ++ +T + + + + ++ +++ S + +
Sbjct: 285 KLLDNLETLAANGAQASETLKLLTTDVNNPAT-ASELRQTLKSARETLDNASQITSDLKD 343
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN--LQNFSQSGLNDIQN 410
I+ +E + +S+ + + + + FSQS +
Sbjct: 344 ITGNEEVRQNLIRLINGLGKLLSSSQDLEQQMQGVQKAPLTSAFSQSDAPSTPS 397
>gi|170766139|ref|ZP_02900950.1| Mce family protein [Escherichia albertii TW07627]
gi|170125285|gb|EDS94216.1| Mce family protein [Escherichia albertii TW07627]
Length = 183
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSMRTEPTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|41409703|ref|NP_962539.1| hypothetical protein MAP3605 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118463171|ref|YP_884134.1| virulence factor Mce [Mycobacterium avium 104]
gi|254776555|ref|ZP_05218071.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|41398535|gb|AAS06155.1| hypothetical protein MAP_3605 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118164458|gb|ABK65355.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 346
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 82/291 (28%), Gaps = 12/291 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +F V +L F+ I + ++ GL VR
Sbjct: 1 MKITGTLVRLSIFSVVLLIFTVMIIVVFGQMRFDRTNGYSAE---FSNISGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ + L + + + + PLY STTA IR L G Y+EL + E
Sbjct: 58 SGVEVGKVSSVQLV-DGGKRARVEFNVDRSVPLYQSTTAQIRYLDLIGNRYLELKRGQGE 116
Query: 121 --KKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENI 172
K + R + + + + Q I
Sbjct: 117 GADKVLPPGGFIPLSRTQPALDLDALIGGFKPLFRALDPQKVNTIATALVTVFQGQGGTI 176
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L T + I + T + +++ + K
Sbjct: 177 NDILDQTAQLTSQLGERDQAIGEVIKNLNTVLDTTVRHRQQFDQTINNLEVLITGLKDHG 236
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
I ++ + + T++ + Q + ++
Sbjct: 237 DQLAGGTAHISNAAGTVADLLAEDRSLLHKTLNYLDAVQQPLIDQQDQLQD 287
>gi|304437502|ref|ZP_07397460.1| mammalian cell entry domain protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304369552|gb|EFM23219.1| mammalian cell entry domain protein [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 426
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/311 (9%), Positives = 79/311 (25%), Gaps = 15/311 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG F + + + + + +V GL+ ++ V +G+PVG
Sbjct: 4 EAKVGAFTLGGVILLIAVVVFFGGLRLGSSSDYTLYAGFHRAV-GLNPEAQVLLSGVPVG 62
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D +I + + TI G+ G +I ++
Sbjct: 63 HVQDVVSDGTG---VTVSMIIERGVKIPRGSAVTIGQPGIMGDKFIIITPNGNSDTYANG 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ +N I + ++ ++ +
Sbjct: 120 DYLYGTDEMGMDTMFVELNKMIVLVQEMLTSVNAIVGAPGFQTSVVQLAVNMEHITANLD 179
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + + + T + + ++++
Sbjct: 180 GLTATLEQMAAENRGDLRSILVNMNTMTANLAQSTASVERIMANLESVGADPATAENLRQ 239
Query: 247 QVSSNNF-----------VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+++ +++ T D R + + K L+ SS +
Sbjct: 240 TLANITDASGRIARIAAGIEAVAGDPQTQEDARTLIHNARTMTDKAGGLMGRLSSIKVTP 299
Query: 296 ETSAFLENIAD 306
+ AD
Sbjct: 300 KVDIMYSGKAD 310
>gi|227887914|ref|ZP_04005719.1| ABC superfamily ATP binding cassette transporter, binding protein
[Escherichia coli 83972]
gi|300990923|ref|ZP_07179375.1| Mce family protein [Escherichia coli MS 45-1]
gi|301047960|ref|ZP_07195005.1| Mce family protein [Escherichia coli MS 185-1]
gi|227835310|gb|EEJ45776.1| ABC superfamily ATP binding cassette transporter, binding protein
[Escherichia coli 83972]
gi|300300192|gb|EFJ56577.1| Mce family protein [Escherichia coli MS 185-1]
gi|300406999|gb|EFJ90537.1| Mce family protein [Escherichia coli MS 45-1]
gi|307555286|gb|ADN48061.1| Mce family protein [Escherichia coli ABU 83972]
gi|315294853|gb|EFU54192.1| Mce family protein [Escherichia coli MS 153-1]
Length = 183
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|257459531|ref|ZP_05624640.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter gracilis RM3268]
gi|257442956|gb|EEV18090.1| putative ABC transport system periplasmic substrate-binding protein
[Campylobacter gracilis RM3268]
Length = 309
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/307 (10%), Positives = 88/307 (28%), Gaps = 4/307 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ YT VG FV+ + ++W+ I G+ +S V+F
Sbjct: 1 MENRTSYTIVGAFVMICVAALTAFMWWMLTKTDRGESYRSYYIHTKELPVGIKENSEVKF 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ G I + + ++ P+ + A + +QG++GI +I ++ +
Sbjct: 61 IGVNAGIIKSIDFADIENAIIEIEISVKSKLPISQDSVAKVESQGISGIAFINITKGSGK 120
Query: 121 -KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + ++ S + KI+ +
Sbjct: 121 LFPPNDKKPIIALDKTLLDKIGSKAEVITDSVSEMIFKINGLLSKQNTDKVDRILSSMD- 179
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ S + + + + ++ + + + D + + +
Sbjct: 180 --KFSAELSDEKKFQSLDALLANVNTLIANLNEREKELDALLDNLNAFAVSAANLSNSLD 237
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + T+ + + T ++ ++ +
Sbjct: 238 KTAGIITKRIDRGEYNLKAILDPTLEEAKNTLGELKKSLREFQGAMFRLEDNPYDFFFKD 297
Query: 300 FLENIAD 306
++
Sbjct: 298 TSKSADR 304
>gi|94263142|ref|ZP_01286960.1| Mammalian cell entry related [delta proteobacterium MLMS-1]
gi|93456513|gb|EAT06627.1| Mammalian cell entry related [delta proteobacterium MLMS-1]
Length = 375
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/360 (11%), Positives = 103/360 (28%), Gaps = 19/360 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ Y ++G+FV L ++ L + V + SV G+ S V+
Sbjct: 1 MSNQPNYYTIGIFVSIGLVLFLGALAVLG-TGALWKETVTVETYLDESVQGIDRGSQVKM 59
Query: 61 NGIPVGRIVGLFL-------DQEYPNHSLAKALIRPDTP-----LYPSTTATIRTQGLAG 108
G+ VGR+ + D S I + + + G
Sbjct: 60 RGVTVGRVDDITFVGLRYHPDTRQVGDSYVLLEISLELSEFGGLSPGEFKKFLENEIERG 119
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+ L + + + + + N +I +A T ++ ++ +
Sbjct: 120 LRIRLLPMGITGAAYLEMDYLDPGRHPPLPIQWTPENQYIPSAPGTFARLEETFESLGNT 179
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ----VTPHSSDSKNTFNTITDLI 224
+ IE + + + S++ + I
Sbjct: 180 MAKIEDMDIQKTLKQLDNLIQSLDKSVQSFDLAGISTRAEVFLEELSETNRRISGFIGPI 239
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
++ + + +V S+ D+ + +T + + + +
Sbjct: 240 DDPEEKRTDLHTVLQDSRNILQKVDSSLDRLQLDKDGGAADQIAQTLENLHQASEMLPET 299
Query: 285 LSDFSSKMKSKETSAFLEN--IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ S S + S+ + S + +R +R + Q I + + +
Sbjct: 300 MDSISVTTASLQESSKSVERLSSRSYTMLRGRNEELRTLLRNMQIISENLLDLSQDAKSY 359
>gi|302382567|ref|YP_003818390.1| hypothetical protein Bresu_1455 [Brevundimonas subvibrioides ATCC
15264]
gi|302193195|gb|ADL00767.1| Mammalian cell entry related domain protein [Brevundimonas
subvibrioides ATCC 15264]
Length = 312
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 111/313 (35%), Gaps = 6/313 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME +Y +VG+ V++L WL+R Q++ I G V+G+S V F
Sbjct: 1 MERDAHYAAVGIATVALLAALAVFAIWLARL-QFNDSYDLYDIVFTGPVNGVSEGGEVHF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + L LD + +A+ + TP+ ++ A + QG+ G+ +++++ +
Sbjct: 60 NGIRVGEVTDLNLDPNKGDQVIARVRLDATTPVRVTSRAQLEPQGITGLNFVQITAGTEG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + ++ + +R + + ++ + +TT+
Sbjct: 120 SPLLKTQYADDVVPVIQSQASPFAELLSGSGTVLAQAVDALNRVNRVLSDDNIRSFSTTL 179
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF-----NTITDLITSLDKMIKAID 235
N+E++S L ++ + I I A
Sbjct: 180 KNVESLSNELEARKGMFKELEEALTKANAAVGEYEALGADARRLINTDGAEAVASINAAA 239
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
I + ++ + + + E Q QE + L+ D + +
Sbjct: 240 GDARTAIASINRTATGLEGPVGELTTTGIPQLLEAIQGLQEATDSLQGLVDDVRASPRDF 299
Query: 296 ETSAFLENIADST 308
+ +
Sbjct: 300 IGRPPSQELEVQP 312
>gi|26249779|ref|NP_755819.1| hypothetical protein c3953 [Escherichia coli CFT073]
gi|26110207|gb|AAN82393.1|AE016767_153 Hypothetical protein yrbD precursor [Escherichia coli CFT073]
Length = 188
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 6 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSI 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 66 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 124
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 125 DPELGTAILKDGDTIQDTKSAMVLED 150
>gi|218441472|ref|YP_002379801.1| hypothetical protein PCC7424_4571 [Cyanothece sp. PCC 7424]
gi|218174200|gb|ACK72933.1| Mammalian cell entry related domain protein [Cyanothece sp. PCC
7424]
Length = 468
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 59/428 (13%), Positives = 131/428 (30%), Gaps = 23/428 (5%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGL ++ L + I WLS + + P + G+S + V + G+ VGRIV
Sbjct: 19 VGLTILVALGLLGWLILWLSNFS-FGNRSYRATFIFP-NAGGMSVGTRVAYRGVRVGRIV 76
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + I P D + +++ GL G T I++ + +
Sbjct: 77 SINPEP---GGVAIGVEISPADRLIPANSSIEAVQAGLVGETSIDIIPVEGLPPEGVKAD 133
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ +G + + I R I + IA T +
Sbjct: 134 PLDPKCNRAIIICNGSRLQGEGKLDVNALIRSLLRIADVIDDPEFTGTVRVIAQRTTDAL 193
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ S + + + + + D + Q I +
Sbjct: 194 GNISSFSKEASGLIKDTRSNRTINRLDNTLLSIDQAADSVNQAASQIDQVTGDINQAAGS 253
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
++S + + ++T + + + NI ++
Sbjct: 254 LQRLGNQASSLLEEA--ERQDTLKNLNSTLVSLQGFSEQIRG-----FITVNQGNIGNTL 306
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + + + I++ + + +NL+ S A L + +ISA + +
Sbjct: 307 VGLGETSQELAATLRKLGPILTQV-EQSKLVTNLDTISNNTAALTGNLRDISAKLNDPAT 365
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + R E N+ + N R L+ + + +++
Sbjct: 366 IVQLQQILDAARAVFENANKITSDLDELTGN---------PQFRRDLRRVIEGLSNLVSS 416
Query: 429 FERNPQDI 436
E+ Q +
Sbjct: 417 SEQLQQQL 424
>gi|294678128|ref|YP_003578743.1| mammalian cell entry domain-containing protein [Rhodobacter
capsulatus SB 1003]
gi|294476948|gb|ADE86336.1| mammalian cell entry related domain protein [Rhodobacter capsulatus
SB 1003]
Length = 157
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 46/119 (38%), Gaps = 7/119 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M G V+++ + W + + + + SV+G++ + V
Sbjct: 1 MSENRVEVLTGAAVLAV---AVGFFLWAGQGHSFGTAASGYPLKASF-RSVEGITVGTDV 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
R G+ VG + + L+ + + ++P + + I T+GL G ++E+
Sbjct: 57 RMAGVKVGSVTDIALNPQTF-FADTTVAMKPGVDIPDDSQILIATEGLLGGAFVEILPG 114
>gi|281423571|ref|ZP_06254484.1| mce related protein [Prevotella oris F0302]
gi|281402391|gb|EFB33222.1| mce related protein [Prevotella oris F0302]
Length = 299
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 88/283 (31%), Gaps = 6/283 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ + + + FF + +L + + + GLS+ + + +G VG
Sbjct: 6 EIKIAIVAIVGILVLFFGLNFLKGMTLFSNDNTYYVS--FKDISGLSSSNPIYADGYKVG 63
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D + L + + D + ++A I + + I L ++
Sbjct: 64 VVKRIQYDYDKGGDILVQINVDQDLRIPKGSSAEIESDIMGNIKMNLLLANNPRERVNPG 123
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + + + E KI ++ ++ N + T
Sbjct: 124 ETMIGSTKNGLMGKVA---SLVPTVEVMLPKIDSILTNLNALLANPALAQSLQNIEGITG 180
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + ++ V + +L ++ A + +V+Q + N+
Sbjct: 181 NLKTTSKQLNVLMADLNKNVPGLLHKANGVLTNADKFTGNLARVDVAGTMSQVDQTIANL 240
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ ++ + +HD + + D LL +
Sbjct: 241 KDFTHQLNSREGSLGLLMHDP-TLYNNMNKTMRSADSLLLNVR 282
>gi|85375832|ref|YP_459894.1| ABC-type transport system periplasmic component [Erythrobacter
litoralis HTCC2594]
gi|84788915|gb|ABC65097.1| ABC-type transport system periplasmic component [Erythrobacter
litoralis HTCC2594]
Length = 281
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 1 MESKNYYTSVG----LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
ME+ ++ VG + +++ + F+ I ++R SV+GL S
Sbjct: 1 METSANFSVVGWIGGILMLTTIAFAVCFI-------DPKPNQGTYLVRFDRSVEGLQPGS 53
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+V +G+PVGR+ + L + P + L + P ATI T + G
Sbjct: 54 TVTLSGVPVGRVTSVRLAENGPENVLVVLTLDPSAAKVLGLEATISTNLITGEA 107
>gi|268317892|ref|YP_003291611.1| Mammalian cell entry related domain-containing protein
[Rhodothermus marinus DSM 4252]
gi|262335426|gb|ACY49223.1| Mammalian cell entry related domain protein [Rhodothermus marinus
DSM 4252]
Length = 314
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 43/135 (31%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S VG+ +V FF +L A +P GL S VR
Sbjct: 5 MTSYRNEIKVGVALVVAALILFFGTRFLLNL-PLFEQTATYETLLPD-ASGLVDGSVVRL 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + + I PL + + + G +E+
Sbjct: 63 KGVVVGRVTDVRYDPQS-GMARVRFQINGSIPLPEGSYTRVAGLAMFGNVEMEIVPGPAG 121
Query: 121 KKTIFQIATERNQRA 135
+ + Q
Sbjct: 122 NPPLRPGSRLPAQTD 136
Score = 43.4 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 60/189 (31%), Gaps = 4/189 (2%)
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ S T + + V ++++ LL F ++ T +
Sbjct: 122 NPPLRPGSRLPAQTDGGLDALVEEAPAVLERLNTLLGRFDEAAEAAATQLSAPGSDLRQT 181
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLF 369
+ S+ +++ T+EN+++ I A + L
Sbjct: 182 LLALRQSSQTLAALLQREQQHIARTLENLSATSTQLRDATGPTADSIQA--AAAQLRHLL 239
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
+ + + + + ++ + I + + ++ L KL T+ + L +F
Sbjct: 240 RRLEASTASLEQATASLDLILAHIASGQGTLGRLIYDE--TLYLKLDTTLTGLNRILRDF 297
Query: 430 ERNPQDIVW 438
E NP +
Sbjct: 298 ETNPGRYLR 306
>gi|78223738|ref|YP_385485.1| virulence factor MCE-like protein-related protein [Geobacter
metallireducens GS-15]
gi|78194993|gb|ABB32760.1| Mammalian cell entry-related protein [Geobacter metallireducens
GS-15]
Length = 360
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/351 (10%), Positives = 99/351 (28%), Gaps = 19/351 (5%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+F++ L F + + ++ P + + I V GL + V G+ VG +
Sbjct: 15 GIFILVALAFFAGGVLLMGDKTKFFVPKGRLSV-IMADVAGLKAGAPVWLAGVDVGVVTQ 73
Query: 71 LFLD-QEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + E N + + + + T++T+GL G Y+
Sbjct: 74 IHFERPEATNEVEIVLEVDREALKKIGADSVVTVKTRGLMGEKYV--------------- 118
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + + ++ +K + + I+ E+ T
Sbjct: 119 DITPTREIVAKPVTRLQGTPMPKLDDVVQKAGRAFDRVDAIVAKTERGEGTLGRFASDPK 178
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ + V + + + +A + Q E
Sbjct: 179 LYDSLVRLTTELNAVAVSVNRGEGTLGMLNKSREPYEKLMSILNRADNTLTDIQSSEGTM 238
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + D+++ +E+ +++ + +E + +
Sbjct: 239 SKLIHDRELYDKLVAVASKAGTAADEVRELNRRLLSKDGTLGKLVADREFYDRGLTLINR 298
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
S+ + + + + + + LN + L+ I
Sbjct: 299 ADTSLKSLEEVTARLQRGEGTAGKLLSDRELYDRLNRTVDDLDLLVKDIKE 349
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 60/183 (32%), Gaps = 10/183 (5%)
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
+ T V ++ KS+E L +I + N + I +
Sbjct: 177 PKLYDSLVRLTTELNAVAVSVNRGEGTLGMLNKSREPYEKLMSILNRADNTLTDIQSSEG 236
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQ------R 374
+ + + + S ++ + EL ++ +S L D +
Sbjct: 237 TMSKLIHDRELYDKLVAVASKAGTAADEVRELNRRL--LSKDGTLGKLVADREFYDRGLT 294
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
++ + + + + + + L+D + L +L TV+ D + + + NP+
Sbjct: 295 LINRADTSLKSLEEVTARLQRG-EGTAGKLLSD-RELYDRLNRTVDDLDLLVKDIKENPK 352
Query: 435 DIV 437
V
Sbjct: 353 RYV 355
>gi|225166503|ref|ZP_03728140.1| mammalian cell entry related domain protein [Opitutaceae
bacterium TAV2]
gi|224799258|gb|EEG17848.1| mammalian cell entry related domain protein [Opitutaceae
bacterium TAV2]
Length = 282
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K +G FV+ + ++ N ++ P ++ S+ GL S V+
Sbjct: 1 MKTKVSPAIIGFFVLGAVALGAIALLSFGSVNLFNKPP-RFVVYFNESIQGLDIGSPVKI 59
Query: 61 NGIPVGRIVGLFLD---QEYPNHSLAKALIRPD 90
G+ +GR+ + + + + I D
Sbjct: 60 RGMRIGRVADVQIRHVPGSHQSLVAVICEINRD 92
>gi|171462920|ref|YP_001797033.1| Mammalian cell entry related domain protein [Polynucleobacter
necessarius subsp. necessarius STIR1]
gi|171192458|gb|ACB43419.1| Mammalian cell entry related domain protein [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 160
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/126 (23%), Positives = 46/126 (36%), Gaps = 3/126 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VG+FV L + F + N P ++ R ++ GL + V+
Sbjct: 1 MRKSAIDVWVGIFVAIGLLAALFLALKVGNMNAVSFAPTYKISARF-DNIGGLKPRAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGRI + D + + I ++A I T GL G YI L
Sbjct: 60 SAGVVVGRIANISFD-DKTYQATVVMTIEDSYKFPKDSSAKILTSGLLGEQYIGLEAGGS 118
Query: 120 EKKTIF 125
+ I
Sbjct: 119 DDMLIN 124
>gi|221202275|ref|ZP_03575309.1| paraquat-inducible protein B [Burkholderia multivorans CGD2M]
gi|221209135|ref|ZP_03582128.1| paraquat-inducible protein B [Burkholderia multivorans CGD2]
gi|221170953|gb|EEE03407.1| paraquat-inducible protein B [Burkholderia multivorans CGD2]
gi|221177849|gb|EEE10262.1| paraquat-inducible protein B [Burkholderia multivorans CGD2M]
Length = 539
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 31/407 (7%), Positives = 101/407 (24%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + T S +
Sbjct: 219 ----------------YDQYVGTNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
++ + + + + + + +
Sbjct: 260 --AFQTPPNQSSGVLAPNNTTFRLAADEGDAMRDPDGQPLQVVMNFNQSLRGLGIGAPVD 317
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ ++ T++ + N+ E Q
Sbjct: 318 FRGIVLGEV-TNIGIDYDPKTKNFTMPVTMNVYPERLGRRFRETIASKGEAARLEIVQRL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + + + + +
Sbjct: 377 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPAKVDVSHQPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + +S + + + + +A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALSNADKLFKQLDTQ-VAPEARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLIKGK 534
>gi|118618292|ref|YP_906624.1| MCE-family protein Mce3B [Mycobacterium ulcerans Agy99]
gi|118570402|gb|ABL05153.1| MCE-family protein Mce3B [Mycobacterium ulcerans Agy99]
Length = 342
Score = 85.8 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 40/128 (31%), Gaps = 5/128 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +G+F+ +F + + DG +V L VR G+
Sbjct: 6 RGVVIRLGVFLTVCALTAFLLVAVFGQVRFGDGNTYYAE---FSNVSNLREGKLVRIAGV 62
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + ++ + + L T A IR L G Y+ L
Sbjct: 63 EVGKVEKISINPD--ATVKVEFTADNSVTLTQGTQAVIRYDNLFGDRYLALEEGAGGLTI 120
Query: 124 IFQIATER 131
+ T
Sbjct: 121 LKPGQTIP 128
>gi|240170051|ref|ZP_04748710.1| MCE-family protein Mce4D [Mycobacterium kansasii ATCC 12478]
Length = 468
Score = 85.8 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 87/283 (30%), Gaps = 11/283 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++++ IY L+ I+ S GL VR G+PVG + +
Sbjct: 19 IIALVAVLVGGIYVLASVGGNGRK----IVAYFTSAVGLYPGDEVRILGVPVGTVDTIEP 74
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ D + A I + L +I+L+ + A+
Sbjct: 75 RPSD---VKITMSVSEDVKIPHDAQAVIMSPNLVAARFIQLTPAYTGGAVLPDGASIELS 131
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R A P + S +S ++ +Q + T+
Sbjct: 132 RT---AVPVEWDEVKEALTQLSVTLSPAAGELQGPLGAAIDQAADTLDGNGDSFHKALQE 188
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN-IQVSSNN 252
+S + + ++ S+ ++ + A + V+Q+L + + +
Sbjct: 189 LSQVAGRLGDSRSDIFSTVKNLQVLVDALSQSNEQIVQFAGHVASVSQVLADSSRNLDHT 248
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + E T E ++ L S++ +
Sbjct: 249 LGTLNQALSDIRGFLHENNSTLIETVGQLGDLTQTLSNQSDNI 291
>gi|255037385|ref|YP_003088006.1| Mammalian cell entry related domain-containing protein [Dyadobacter
fermentans DSM 18053]
gi|254950141|gb|ACT94841.1| Mammalian cell entry related domain protein [Dyadobacter fermentans
DSM 18053]
Length = 321
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VG+ + + +F + L + + + ++DGL+ + V NG+
Sbjct: 4 SREAKVGIMAIFAIVMLYFGFHILKG-SDVFSRTYKYHVIY-DNIDGLTASNPVLLNGLN 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
VGR+ + L Q N L I+ + T A + GL G I L+
Sbjct: 62 VGRVQEIKLLQNRGNQLLVTVDIQKGIVVPQGTGAVLADGGLLGGKVIHLAMG 114
>gi|319954483|ref|YP_004165750.1| mammalian cell entry related domain protein [Cellulophaga algicola
DSM 14237]
gi|319423143|gb|ADV50252.1| Mammalian cell entry related domain protein [Cellulophaga algicola
DSM 14237]
Length = 327
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 1 MESKNYY-TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
ME +GLFV+ IY + G + + ++ GL ++VR
Sbjct: 1 MEKSASEKIRLGLFVLIGSVLLILVIYMIGNKQNMFGNTFTLNVTF-NNIRGLQNGNNVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI +G + + + + + + ++ A I + GL G I +
Sbjct: 60 YAGISIGTVKDIEMINDTTIQVGMLIDNKMQKHIKKNSIANIGSDGLVGSMIINIVPGVG 119
Query: 120 EKKTIFQIAT 129
E +
Sbjct: 120 EAPYVKSGDE 129
>gi|288801132|ref|ZP_06406588.1| mce related protein [Prevotella sp. oral taxon 299 str. F0039]
gi|288332066|gb|EFC70548.1| mce related protein [Prevotella sp. oral taxon 299 str. F0039]
Length = 300
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/289 (15%), Positives = 95/289 (32%), Gaps = 6/289 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + L ++ + FF + +L + G I + G+S S +
Sbjct: 1 MNLITKEIKIALVAIAGVIALFFGMSFLKGLS-LFGNKNTYHIEF-EDLSGVSASSPIYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG VG + G+ D L K + D P+ TTA I + L + +
Sbjct: 59 NGFKVGVVTGIDYDYTAQRKPLVKIELNNDMPVPEGTTAEIESDMLGNVKVNLILAKDIT 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + ++ S + I E K+ I ++ N +
Sbjct: 119 RLLPHDGIIKGSKNNGAMGKMSAM---IPTIERILPKLDSIMTSINTLLANPAINNSLQN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + + + QV S + T + + L ++ + + + KV+
Sbjct: 176 VEGITANLTTSTKELNSLLATLNKQVPGTISKANKTLDNVNKLTGNMASIDISATMSKVD 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ ++Q +N ++ + ++D + Q D L+ D
Sbjct: 236 NTIASLQEFTNKLNSNNGSLGLLMND-QSLYNNLNATMQNADSLMVDLR 283
>gi|301022095|ref|ZP_07186021.1| Mce family protein [Escherichia coli MS 69-1]
gi|300397691|gb|EFJ81229.1| Mce family protein [Escherichia coli MS 69-1]
Length = 183
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 56/146 (38%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPIYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|161525843|ref|YP_001580855.1| hypothetical protein Bmul_2674 [Burkholderia multivorans ATCC
17616]
gi|189349436|ref|YP_001945064.1| paraquat-inducible protein B [Burkholderia multivorans ATCC 17616]
gi|160343272|gb|ABX16358.1| Mammalian cell entry related domain protein [Burkholderia
multivorans ATCC 17616]
gi|189333458|dbj|BAG42528.1| paraquat-inducible protein B [Burkholderia multivorans ATCC 17616]
Length = 539
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/408 (9%), Positives = 105/408 (25%), Gaps = 40/408 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA--E 152
Y + + + + T S + +
Sbjct: 219 ----------------YDQYVGTNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGIAFQ 262
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ S + V+ N + + V
Sbjct: 263 TPPNQSSGALAPNNTTFRLAADEGDAMRDPDGQPLQVVMNFNQSLRGLGIGAPVDFRGIV 322
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
N D + + + L + + ++ V+ +
Sbjct: 323 LGEVTNIGIDYDPKTKNFTMPVTMNVYPERLGRRFRETIASKGEAARLEIVQRLVQHGLR 382
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
G + L + + + ++
Sbjct: 383 GQLRTGNLLTSQLYVALDFFPKAPPAKVDVSHQPLELPTVPNTLDELQLQVADIAKKLDK 442
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ I +NLN + +L +++ + +A+ + + T +
Sbjct: 443 VPFDQIGANLNSALSNADKLFKQLD--------TQVAPEARDTLSAAKQTFSTAEATLQQ 494
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 --------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLIKGK 534
>gi|221214479|ref|ZP_03587450.1| paraquat-inducible protein B [Burkholderia multivorans CGD1]
gi|221165736|gb|EED98211.1| paraquat-inducible protein B [Burkholderia multivorans CGD1]
Length = 539
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/407 (7%), Positives = 101/407 (24%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + T S +
Sbjct: 219 ----------------YDQYVGTNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
++ + + + + + + +
Sbjct: 260 --AFQTPPNQSSGVLAPNNTTFRLAADEGDAMRDPDGQPLQVVMNFNQSLRGLGIGAPVD 317
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ ++ T++ + N+ E Q
Sbjct: 318 FRGIVLGEV-TNIGIDYDPKTKNFTMPVTMNVYPERLGRRFRETIASKGEAARLEIVQRL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + + + + +
Sbjct: 377 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPAKVDVSHQPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + +S + + + + +A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALSNADKLFKQLDTQ-VAPEARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLIKGK 534
>gi|317503720|ref|ZP_07961736.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
gi|315665163|gb|EFV04814.1| conserved hypothetical protein [Prevotella salivae DSM 15606]
Length = 299
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 94/283 (33%), Gaps = 6/283 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ L + + FF + +L + + + + GLS+ + + +G VG
Sbjct: 6 EIKIALVAIVGILVLFFGLEFLKGMSLFSNDNTYYVS--FKDISGLSSSNPIYADGYKVG 63
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D + L + + D + ++A I + + + L ++
Sbjct: 64 VVKHIQYDYDRGGDILVQIDVNKDLRIPKGSSAEIESDIMGNVKMNLLLANNPRERVNPG 123
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + + + E K+ ++ ++ + + T
Sbjct: 124 ETIIGAKNNGLMGKVA---RLLPSVEVMLPKLDSILTNLNALLADPALANSLHNIEGITN 180
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ ++ ++ V + +T + L +L ++ A L +V+Q + N+
Sbjct: 181 NLNTSSKQLNVLMASLNKNVPQMMHKANSTLSNTDRLTANLARLDVANTLAQVDQTIANL 240
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ +N + +HD + Q D LL +
Sbjct: 241 KGFTNQLNSREGSLGLLMHD-ASLYNNLNKTMQSADSLLINVR 282
>gi|206561653|ref|YP_002232418.1| mammalian cell entry related membrane protein [Burkholderia
cenocepacia J2315]
gi|198037695|emb|CAR53638.1| mammalian cell entry related membrane protein [Burkholderia
cenocepacia J2315]
Length = 539
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/407 (8%), Positives = 103/407 (25%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD++ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + L + + + T S +
Sbjct: 219 ----------------YDQYVGLNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + ++ + +
Sbjct: 260 ---AFQTPPNQGSGATAPNNTTFRLGSDEGDAMRDPDGQPLQVVMNFSQSLRGLAVGAPV 316
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +T++ + + N+ RE +
Sbjct: 317 DFRGIVLGEVTNIGIDFDPKTKNFLMPVTINVYPERLGRRFRETIESKGEPARREIVERL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + A R + + + +
Sbjct: 377 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPAVKIDTSRLPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + ++ + + + + +A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALANADKLFKQLDTQ-VAPEARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 534
>gi|228469772|ref|ZP_04054730.1| mce related protein [Porphyromonas uenonis 60-3]
gi|228308611|gb|EEK17362.1| mce related protein [Porphyromonas uenonis 60-3]
Length = 298
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 37/292 (12%), Positives = 87/292 (29%), Gaps = 18/292 (6%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G F + + + I +L + + V G++ + V NG VG
Sbjct: 11 VKIGFFTLLAILILYLGITYLKGLSIAGLSKTYYVSM--NDVTGVNVATRVFVNGYKVGS 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + D + ++ + P L TT + L+G L + +
Sbjct: 69 VRKIEYDYAHNGKAVLTLTLDPKVQLPQGTTVQVAQTLLSGAIVNLLLPALETGAYLHAK 128
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
T P + E + ++++ T ++N
Sbjct: 129 DTI----------PMSTERSAMSLEQLQSEFVPRISATLSRMDSVLLQANTILSNPNIEP 178
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
T+ S + Q+ S I +++ +D ++ + + N++
Sbjct: 179 TLADVRQSAQHINASSAQLQRSLSSLPKIMERIDHTSANVESFASRLDSLRLQETISNLE 238
Query: 248 VSSNNFVKSSDQVINTVH------DVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+S + ++ + + V +D L+ D + K
Sbjct: 239 STSRELKSFTQRLNQSNGTVGRLLNEDGLYNRIDSVTTSLDALIRDIKANPK 290
>gi|73542364|ref|YP_296884.1| hypothetical protein Reut_A2679 [Ralstonia eutropha JMP134]
gi|72119777|gb|AAZ62040.1| Mammalian cell entry related [Ralstonia eutropha JMP134]
Length = 546
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/393 (10%), Positives = 105/393 (26%), Gaps = 30/393 (7%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L S V + + VG++V LD + + P A R +
Sbjct: 180 DLGSLDIGSPVYYRRVQVGQVVAFQLDPNGR---DITLRVFVNKPYDRLVNADTRFWHAS 236
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
G+ ++ K S + A ++ + + +
Sbjct: 237 GVDLKLDASGLKLSTQSLVTVLLGGVAFQAPEGTSATD----GAAENTQFLLAADQAEAM 292
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
P + +++ + ++ + ++ ++ L
Sbjct: 293 KEPEELAPTLAVLNFDQSVRGLSPGAPVDFRGVIVGQVRSIGIEFQRDKKAFRMPVVVEL 352
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ V ++ + + + T + + + K D
Sbjct: 353 YPSRMGFRERDVQDTNRRHEIIAGLLKRGMRAQLRTGNLLTGQLYVALDFFPKAPPANVD 412
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
++ + T+ + + + + + LN +
Sbjct: 413 LNAPIPEFATTPGTFDQLQAQ-------VGDIVNRIDKVPFDQIGQDLRKSVAALNTTLA 465
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
EL+ ++N + A+ R T N + S D
Sbjct: 466 SADELVKQLNG--------DVAPQVLAALQDARKTLSTANGTLSSEAP--------LQQD 509
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +V++L T + + ER+P+ ++ G+
Sbjct: 510 ARRMVQELTRTATSLRNLTDYLERHPEALLRGK 542
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
++ SV GLS + V F G+ VG++ + ++ + +
Sbjct: 304 VLNFDQSVRGLSPGAPVDFRGVIVGQVRSIGIEFQRDKKA 343
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 49/449 (10%), Positives = 122/449 (27%), Gaps = 33/449 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + I L + GP V R S +GL+ ++VR+ + +G + + L
Sbjct: 35 LIPIVAAVVGISLLVHTLTSRGPEITVTFR---SAEGLTPGKTAVRYKDVDIGLVKSVRL 91
Query: 74 DQEYPNHSLAKALIRPDTPLY--PSTTATIRTQGL--AGITYIELSTLRKEKKTIFQIAT 129
+ +H LA + D + T + +G++ +E +T
Sbjct: 92 ASDR-SHVLANIDLTKDAENFAVADTRFWVVRPRFAASGVSGLETLLSGAYIGVDAGKST 150
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
E + P + S + + S I + + +A +
Sbjct: 151 ESRREFKGLEAPPVVTSDSSGKQFVLRASDLGSLDIGSPVYYRRVQVGQVVAFQLDPNGR 210
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
++K + + D + + + + +
Sbjct: 211 DITLRVFVNKPYDRLVNADTRFWHASGVDLKLDASGLKLSTQSLVTVLLGGVAFQAPEGT 270
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
S + + D E + +E+ + L D S + S +
Sbjct: 271 SATDGAAENTQFLLAADQAEAMKEPEELAPTLAVLNFDQSVRGLSPGAPVDFRGVIVGQV 330
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI--NNISALKENNS 367
+ + ++ + + + E+++ + + A +
Sbjct: 331 RSIGIEFQRDKKAFRMPVVVELYPSRMGFRERDVQDTNRRHEIIAGLLKRGMRAQLRTGN 390
Query: 368 LFK------------------DAQRAMHTFRDTSEKINRYIPSIGNNLQNFS----QSGL 405
L D + F T ++ +G+ +
Sbjct: 391 LLTGQLYVALDFFPKAPPANVDLNAPIPEFATTPGTFDQLQAQVGDIVNRIDKVPFDQIG 450
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
D++ V L T+ D+ + +
Sbjct: 451 QDLRKSVAALNTTLASADELVKQLNGDVA 479
>gi|182412510|ref|YP_001817576.1| hypothetical protein Oter_0687 [Opitutus terrae PB90-1]
gi|177839724|gb|ACB73976.1| Mammalian cell entry related domain protein [Opitutus terrae
PB90-1]
Length = 332
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/319 (15%), Positives = 94/319 (29%), Gaps = 4/319 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLF V L ++ + LS + +I GS+ L VR
Sbjct: 1 MNTAQQTARVGLFFVLGLALTWVTFETLSGGKIFREDGYTLIAPF-GSLKELKNGDEVRM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + L+ E + A I D+ + A+I GL G YI +
Sbjct: 60 AGVKIGVVERTRLNPE-KRRAEAILRINTDSTIPSDAVASISMSGLIGTNYIAVDLGTPS 118
Query: 121 KKTIFQIATERNQ-RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ R + A + S + E + + +K
Sbjct: 119 APVLRPGDEIRTRNTADFNSIMSDLGNLGQKLEGALGAFGKAMSGEEGQPGLFQKLDRLV 178
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK- 238
N E ++ ++N K+ + + + + +
Sbjct: 179 TENQEKVTATMSNLQDITAKVNQGQGTLGKLVNDPALHDELLAAVQDIKGAAAGAKDFMA 238
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
Q + + S + + N D++ T F+ V KI ++ +
Sbjct: 239 NAQAIVDQVKSGKGTIGALVYDENAASDLKATMANFRSVSDKIAKGEGTLGKLIRDDQLY 298
Query: 299 AFLENIADSTSNMRSSISA 317
++ +S
Sbjct: 299 QSAQSTLKKADRALDGMSD 317
>gi|310816751|ref|YP_003964715.1| paraquat-inducible protein B [Ketogulonicigenium vulgare Y25]
gi|308755486|gb|ADO43415.1| paraquat-inducible protein B [Ketogulonicigenium vulgare Y25]
Length = 701
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/424 (12%), Positives = 128/424 (30%), Gaps = 17/424 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + DG ++ G+V GL+ ++V G+ VG + G+ + ++
Sbjct: 283 SLFTRQDGQPVNLVAVFEGNVTGLAVGAAVELEGLRVGEVSGINGYFDTDRFGDDNLRLQ 342
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
+ PS + +G + ++ ++ + +
Sbjct: 343 AVLSIQPS---RLGLEGDSSAMETLDYLQQQVREDGLRARLVTGSLLTGGLKVQLLRDAD 399
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ A + + T + + +
Sbjct: 400 AVAAEIDMNAQPYPEVPATQSQITDAATTVEGTLARVNDLPIEELMQSAIGFLDNASTLV 459
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
S+ ++ + L+ + + A ++Q + L S V+ V++ + D
Sbjct: 460 GSAQTQAIPGEVAALLGDVRNLTGAPEVQALPAQLGATMASITGAVEDLRAVMSDLRD-A 518
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ E ++ +++D + ++ + + S + + +
Sbjct: 519 DAAGRILEAVDQVQAVVTDVGTGLEGLPELLATVD-ELAQSWRDLPLEGVVTQAESFLAT 577
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINN----------ISALKENNSLFKDAQRAMHT 378
++ D S L + ++ SAL + A
Sbjct: 578 ADSVLGDPRTRQLPADISSALDSLRAVLDEARDGSLIANANSALASASRAADQLATATDG 637
Query: 379 FRDTSEKINRYIPSIGNNLQNF--SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
S ++N + G L +F + S + D++ +R++ +D ER P I
Sbjct: 638 LPALSAQVNALVVQAGGTLSSFDENASLMRDLRLALRQVNSAATAINDLARALERRPNSI 697
Query: 437 VWGR 440
++GR
Sbjct: 698 LFGR 701
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/398 (8%), Positives = 113/398 (28%), Gaps = 6/398 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTA 99
+ + + S L+ +SS+ + G+ VGR+ + + + A D + +T
Sbjct: 164 LRVLLRSSDQTLTGNSSIIYKGVEVGRVGPATVAADGQTVQAEAVIFAPHDALVTEATRF 223
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + + T+ + ++ P + + +
Sbjct: 224 WNSSGFSVSLGPTGAALNFGSLATLISGGVTFDT--FVSGAPLAQDGTAFDVFGDNSAAR 281
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
S Q + + + + ++ +
Sbjct: 282 SSLFTRQDGQPVNLVAVFEGNVTGLAVGAAVELEGLRVGEVSGINGYFDTDRFGDDNLRL 341
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
L ++ D + + Q + +++ + + + Q ++
Sbjct: 342 QAVLSIQPSRLGLEGDSSAMETLDYLQQQVREDGLRARLVTGSLLTGGLK-VQLLRDADA 400
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI- 338
+ + + T + + + A + + ++ + + I N +
Sbjct: 401 VAAEIDMNAQPYPEVPATQSQITDAATTVEGTLARVNDLPIEELMQSAIGFLDNASTLVG 460
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN-NL 397
++ + A L+ + N++ E +L M + E + + + + +
Sbjct: 461 SAQTQAIPGEVAALLGDVRNLTGAPEVQALPAQLGATMASITGAVEDLRAVMSDLRDADA 520
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
++ +Q +V + + + L + Q
Sbjct: 521 AGRILEAVDQVQAVVTDVGTGLEGLPELLATVDELAQS 558
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 13/93 (13%), Positives = 29/93 (31%), Gaps = 8/93 (8%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
V L + L + + Y+ + I G+ + + +R+ + VG
Sbjct: 23 IVWLVPIIALIIAVGLAW-----QNYNDRGPLIEIVF-DDASGVRANETELRYRDVGVGI 76
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ + + + + I Y T A
Sbjct: 77 VESVGFT-DDLDQVVVSVRIDKAVAPYVDTGAQ 108
>gi|187250743|ref|YP_001875225.1| organic solvents resistance ABC transporter periplasmic protein
[Elusimicrobium minutum Pei191]
gi|186970903|gb|ACC97888.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Elusimicrobium minutum
Pei191]
Length = 430
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 54/135 (40%), Gaps = 6/135 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T VG+F V+ + S+Y L + G +V +R V GL S+V+ NG+ VG
Sbjct: 4 ETKVGIFAVAGVILFGISVYMLGNIST--GGEYKVNVRFSD-VTGLPGKSTVKLNGVDVG 60
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + ++ + H L I+ +Y I T + G ++ ++ + K +
Sbjct: 61 KVRRIKMNGD---HVLVTVGIKDGVEIYRDAAFKITTSSIIGSKFLSIAQGKPGKGILKN 117
Query: 127 IATERNQRAMITATP 141
T
Sbjct: 118 GDTIDGANEPSMDQM 132
>gi|217033905|ref|ZP_03439329.1| hypothetical protein HP9810_870g37 [Helicobacter pylori 98-10]
gi|216943668|gb|EEC23113.1| hypothetical protein HP9810_870g37 [Helicobacter pylori 98-10]
Length = 251
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 71/181 (39%), Gaps = 3/181 (1%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
I WL DG E ++ + G++T+S V + GI VG ++ + ++
Sbjct: 1 MVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNYKGIQVGNVIKVGFAKDKVGV 60
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
+I+ + + + ++GL G+ ++ L E+ F + ++ +R +I
Sbjct: 61 VRLDLMIKSSVKIRKDSKVAVSSRGLMGLKFLALEQSHNEE---FYGSGDKGERILIFKE 117
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+ + + + + + + + +A+++ + L + + D +
Sbjct: 118 GLMDRLSVDANQAMQEVMKAIKNVNKVLDDENVEKFKHILASVDDLIANLDSRKTQFDAL 177
Query: 201 M 201
+
Sbjct: 178 I 178
>gi|86606210|ref|YP_474973.1| mce related protein [Synechococcus sp. JA-3-3Ab]
gi|86554752|gb|ABC99710.1| mce related protein [Synechococcus sp. JA-3-3Ab]
Length = 408
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/419 (10%), Positives = 123/419 (29%), Gaps = 31/419 (7%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ +VGL +++ W+ ++ + P +V GL+ SSVR
Sbjct: 1 MRSRAIREGAVGLLILAGALGFAGLFLWIYNL-RFGSRGFRFTVTYP-NVAGLAEGSSVR 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + + I + + GL G T +++
Sbjct: 59 LRGVAVGRVERIVPQA---AQVEVQVAIDQPLIIPRDALFITQQTGLVGETVVDI----- 110
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
R +P + S + + I
Sbjct: 111 ---------LPRGSVEGAVGSPLAADCDRSQIICDGDVVEGKPG-VDFGQLLIRLERLLA 160
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + + + L + I ++ + + + + DL Q
Sbjct: 161 RVDDDEVFSTLNATLEGITRVADSVANLSETLEERVAALRTEDLDLLQFTEAARAVSQTA 220
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ E + +++ + + ++++ + + + + L + +E
Sbjct: 221 ASLQEAADQFTALLLENRASLRAALENIQQVSADLEAMSSAVRPL---LTDPQLQEEVRQ 277
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
L + N + +R++ T+ T+ + S Q ++ + I+ +
Sbjct: 278 ILVGARVTAENAAKATEDLRQLAAALSDP-GTLATLRQTLDSARISFQNVQKITADIDEL 336
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINR------YIPSIGNNLQNFSQSGLNDIQNLV 412
+ + ++ + ++ N + + L Q + + +
Sbjct: 337 TGDPQFRRALRELVLGLSNLVSSAPSDNGIQPAAVQVAPVSFTLAPMGQQPVPQEEAKI 395
>gi|149187030|ref|ZP_01865337.1| ABC-type transport system periplasmic component [Erythrobacter sp.
SD-21]
gi|148829319|gb|EDL47763.1| ABC-type transport system periplasmic component [Erythrobacter sp.
SD-21]
Length = 299
Score = 85.4 bits (208), Expect = 2e-14, Method: Composition-based stats.
Identities = 50/301 (16%), Positives = 109/301 (36%), Gaps = 10/301 (3%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+L I W++R + G E I SV GL+ S V F G+PVG++ + L +
Sbjct: 1 MLAALALFIVWIARWGE--GAQKEYDIFFKESVSGLANGSQVAFAGVPVGQVSQIVLWDK 58
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
P + ++ + P+ TTATI+ T + + +
Sbjct: 59 DPEFVRVRISVKDEVPILVGTTATIQGSFTGVSTILLDGARSGAPPISCETTACTEGVPI 118
Query: 137 ITATPSGINYFISNAENTSKKISDSSRH-IQKIIENIEKPLTTTIANIETISTVLANNIS 195
I G+N +SNA ++++ + Q + + + + +AN ++ LA
Sbjct: 119 IPPKDGGLNALLSNAPLLLERLATLTERLTQLLDDENQGEIAGILANTNQMTADLAQAAP 178
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ M Q+ + + D + + Q+ + + ++ +
Sbjct: 179 QFESTMAELQM------TLREASEALDQFEQVTASTDRLLNQEGAALADQLRQTLKQAGN 232
Query: 256 SSDQVINTVHDVRETTQTFQE-VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
+S+++ + + R T+ E + L D + K+ + + + + S
Sbjct: 233 ASEELQGVLAEARPATKQLTESTLPAAEATLRDLRATSKALRDVTEKIDEQGAGALLNSQ 292
Query: 315 I 315
Sbjct: 293 P 293
>gi|261250144|ref|ZP_05942720.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
orientalis CIP 102891]
gi|260939260|gb|EEX95246.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
orientalis CIP 102891]
Length = 160
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKIELWVGSFVIAGICAILVMIFQVADVKGLGSNDTYTLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ +GR+ + LD E I +++ I T GL G YI L+
Sbjct: 64 VVIGRVTNIGLDSESLLPV-VSMAINSTYNQFPETSSVKILTSGLIGEQYIGLTPGF 119
>gi|52425766|ref|YP_088903.1| hypothetical protein MS1711 [Mannheimia succiniciproducens MBEL55E]
gi|52307818|gb|AAU38318.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 167
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF++ + F ++ + + + ++ GL + ++ G+ +GR+
Sbjct: 11 VGLFLLIGIAALIFMGLKVANVQGFSETKSYQVFATFDNIGGLKVRAPLKVGGVVIGRVT 70
Query: 70 GLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
+ LD++ I + + +++ +I+T GL G YI LS
Sbjct: 71 NISLDEQNY-LPQVTIAINEEYNQIPENSSLSIKTSGLLGEQYIALSVGFD 120
>gi|260886515|ref|ZP_05897778.1| putative ABC transport system substrate-binding protein
[Selenomonas sputigena ATCC 35185]
gi|330839642|ref|YP_004414222.1| Mammalian cell entry related domain protein [Selenomonas sputigena
ATCC 35185]
gi|260863658|gb|EEX78158.1| putative ABC transport system substrate-binding protein
[Selenomonas sputigena ATCC 35185]
gi|329747406|gb|AEC00763.1| Mammalian cell entry related domain protein [Selenomonas sputigena
ATCC 35185]
Length = 427
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/368 (10%), Positives = 95/368 (25%), Gaps = 20/368 (5%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F + + + L + + + V GL+ ++ VR+ G+
Sbjct: 2 TTEAKVGAFTLLGIAILTAVLLQLQGFSFSTSRNYTIYVGFTQ-VVGLAPEADVRYAGVL 60
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
G++ + + + PD + ++ + G ++ +S +
Sbjct: 61 AGKVKAIEPEGTG---VRVTLSVHPDIQIPRDARISLAANSVLGDKFVLISPAGSKSTDY 117
Query: 125 -----FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F I T+ + S + + + I + R + ++ + E T
Sbjct: 118 LKDGDFVIGTDETSVDSVLENVSEAVADVHDLLGSLNDILGNPRMKESVLGSAENVREVT 177
Query: 180 IANIE-----TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + H + S+ ++ D+
Sbjct: 178 AHIRDLTAVLGRVALQNEGNMHAMMEEMQIILANLSATTETVRQMAADVSDGGATAANLR 237
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ D++ T + V +K + L + SS
Sbjct: 238 LTLLNVARASENIRQVAEELHDITGDPTVREDLKATIHQARAVTEKANDTLDNLSSIETQ 297
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
R I+ + + + ND + +
Sbjct: 298 PSVDILYSGKN------RDWITNFNVDVSKEDRPDRFLRVGVEDIGEGNDLNLEVGRTKG 351
Query: 355 KINNISAL 362
++ + L
Sbjct: 352 RLGARAGL 359
>gi|152991078|ref|YP_001356800.1| hypothetical protein NIS_1335 [Nitratiruptor sp. SB155-2]
gi|151422939|dbj|BAF70443.1| conserved hypothetical protein [Nitratiruptor sp. SB155-2]
Length = 488
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 98/281 (34%), Gaps = 9/281 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ T VG+FV L F F +++ + + I + GL +S V+
Sbjct: 1 MKT---ETKVGIFVAIGLLFLFLLSMQVNKFSHIGKKGYTIYA-IVDNASGLENNSKVKE 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + L+ K I + + ++ +R + + G Y+E+ +
Sbjct: 57 KGVDVGYVQSKTLEGN---RVKLKLYIYQNAKIPKDSSVALRQESMLGGKYLEIEPGDSK 113
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T + + + + + E + E+++K +
Sbjct: 114 EF-LKPGETIQKELPYASLDQTTTTINEAAGEFKAFIKELRRSIAGSSGEDLKKSIENLQ 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQ-VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ ++ +N +I+K + + + + + ++D I Q +
Sbjct: 173 ELTANLKELVQSNKENINKSIENIRIMGEKLALAGEKLGRMSDKFAYTADNINTKLPQIM 232
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
++I + + ++ + ++ + EV Q
Sbjct: 233 HRIDDITKYLRSSSKELDKKLPTLMDKFAALEDDLHEVVQN 273
>gi|323143324|ref|ZP_08078013.1| hypothetical protein HMPREF9444_00630 [Succinatimonas hippei YIT
12066]
gi|322416896|gb|EFY07541.1| hypothetical protein HMPREF9444_00630 [Succinatimonas hippei YIT
12066]
Length = 163
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 2/119 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLF+V + + ++ + ++ L + VR
Sbjct: 1 MKFSKVEFLVGLFMVLGIAAAVIMSLKVAGLVLDSSSSTYTVHAKFDNIGSLKLRAPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
G+ +GR+ + LD++ I + L + A+I T G+ G YI ++
Sbjct: 61 GGVLIGRVEAISLDEKDLVPV-VDIAINSEYKELSSESQASILTAGIIGEQYIGITPGF 118
>gi|120405103|ref|YP_954932.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957921|gb|ABM14926.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 341
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/296 (13%), Positives = 84/296 (28%), Gaps = 9/296 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+++ T V ++ + +L S+ G E L T +VR G
Sbjct: 2 TRSAATLVKFTAFGLVMALLTAFLFLVFSDTRTGAANEYTAVFKD-ASRLKTGDTVRIAG 60
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I VG + + L + L +T L T A IR L G Y+EL +
Sbjct: 61 IRVGTVKDVELQAD--RSVLVTFDADRNTVLTTGTNAAIRYLNLVGDRYLELVDTPDSTQ 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPL 176
+ R + + E+ + S + +Q ++
Sbjct: 119 IVPAGGQIPEDRTTPALDLDVLLGGLKPVIQGLNPEDVNGLTSALIQILQGQGGTLDSLF 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ T + +++ I + + + + + S +
Sbjct: 179 SKTSSFSNSLADNNQVIEELIVDLRTVLDTLSKDGEEFSGAIDKLEQLVSGLSSDRDPIG 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + ++ + + NTV ++ ++D L
Sbjct: 239 TAITALDNGTASIADLLGRGRAPLANTVDEMNRLAPLVDNDLDRLDATLQRLPEIY 294
>gi|323524779|ref|YP_004226932.1| mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1001]
gi|323381781|gb|ADX53872.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1001]
Length = 552
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/449 (10%), Positives = 118/449 (26%), Gaps = 52/449 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDG---------------- 51
VG VS L Y + + D V + P V G
Sbjct: 134 RVGASGVSGLTTLLSGAYIGADAGHSPDSEKNFVGLETPPPVTGDQKGHQFILHGDSLGS 193
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++VG LD++ + P R +G+
Sbjct: 194 IDIGSPIFYRRVQVGQVVGFSLDKDGTG---VTMQVFVSAPFDQYVGTNSRWWHASGVDL 250
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K S + + +
Sbjct: 251 RLDSSGFKLNTQSLATVIVGG--------LSFQSPPGQGVGAQAPNNMTFRLAADEADAM 302
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + ++ ++ + T + + +
Sbjct: 303 RDPDGVPLRVVMNFNQSLRGLSVGAPVDFRGIVLGQVTNIGIDYDPKTRSFTMPVTMNIY 362
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + +R ++ +D +
Sbjct: 363 PDRLGKRFRETAPAPGSLAGQNMLQQLVKHGLRGQLRTGNLITSQLYVALDIFPKAPPAT 422
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L I ++ ++ ++ I + D+ + I +NLN + + +
Sbjct: 423 VDVASDPLELPTIPNTLDELQLQVADIAKKLDKVP--------FDQIGNNLNAALKNADQ 474
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L +++ + A+ + + T + +D+
Sbjct: 475 LFKRLD--------TEVVPQARDTLAAAKQTFGSAEATLQQ--------DSPLQSDVHQA 518
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T+ + + ER+P+ ++ G+
Sbjct: 519 LQELTRTLQSLNALSDYLERHPESLLRGK 547
>gi|311744830|ref|ZP_07718626.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311311947|gb|EFQ81868.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 326
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/286 (14%), Positives = 92/286 (32%), Gaps = 8/286 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T +G+ +++ + + R G + GL + VR G+ V
Sbjct: 8 NPTIIGVVGFAVIALMLVAAFRADRLPIIGGGDTYY-AEFAE-IGGLKAGNEVRVAGVTV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + LD I T A +R + L G +++ L+ + +
Sbjct: 66 GTVDDIELDGN---RVRVTFRITDPVEFGEQTGAAVRIRTLLGASFLALTPSGEGQLDQG 122
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
A + + + +++ + + ++ E + IA +
Sbjct: 123 ATIPLARTVAPYDVVEAFSELSDTTSALDVDQVATALETLSEVAEETPEEFRAAIAGVSD 182
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S+ LA I+ ++ S N NT + + + Q+ I +
Sbjct: 183 LSSNLAARDQEINTLLVNL---RQVSGVLNERNTELETLFRDSGTLFTAVTQRREAISDL 239
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + S V T D+R + Q+V ++ +
Sbjct: 240 LDATQLVSTELSLLVDETRADLRPALEKLQQVTDVLEKNQFELDEL 285
>gi|307728491|ref|YP_003905715.1| Mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1003]
gi|307583026|gb|ADN56424.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1003]
Length = 552
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/449 (10%), Positives = 119/449 (26%), Gaps = 52/449 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDG---------------- 51
VG VS L Y + + D V + P V G
Sbjct: 134 RVGASGVSGLTTLLSGAYIGADAGHSPDSEKNFVGLETPPPVTGDQKGHQFILHGDSLGS 193
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++VG LD++ + P R +G+
Sbjct: 194 IDIGSPIFYRRVQVGQVVGFSLDKDGTG---VTMQVFVSAPFDQYVGTNSRWWHASGVDL 250
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K S + + +
Sbjct: 251 RLDSSGFKLNTQSLATVIVGG--------LSFQSPPGQGVGAQAPNNMTFRLGSDEADAM 302
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E + ++ ++ + T + + +
Sbjct: 303 REPDGVPLRVVMNFNQSLRGLSVGAPVDFRGIVLGQVTNIGIDYDPKTRSFTMPVTMNLY 362
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + +R ++ +D +
Sbjct: 363 PDRLGKRFRETAPAPGSLAGQNMLQQLVKHGLRGQLRTGNLITSQLYVALDIFPKAPPAT 422
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L I ++ ++ ++ I + D+ + I +NLN + + +
Sbjct: 423 VDVASDPLELPTIPNTLDELQLQVADIAKKLDKVP--------FDQIGNNLNSALKNADQ 474
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L ++++ + A+ + + T + +D+
Sbjct: 475 LFKRLDS--------EVVPQARDTLAAAKQTFGSAEATLQQ--------DSPLQSDVHQA 518
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T+ + + ER+P+ ++ G+
Sbjct: 519 LQELTRTLQSLNALSDYLERHPESLLRGK 547
>gi|183982887|ref|YP_001851178.1| MCE-family protein Mce3B [Mycobacterium marinum M]
gi|183176213|gb|ACC41323.1| MCE-family protein Mce3B [Mycobacterium marinum M]
Length = 342
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 39/128 (30%), Gaps = 5/128 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +G+F+ +F + + DG +V L VR G+
Sbjct: 6 RGVVIRLGVFLTVCALTAFLLVAVFGQVRFGDGNTYYAE---FSNVSNLREGKLVRIAGV 62
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + ++ + L T A IR L G Y+ L
Sbjct: 63 EVGKVEKISINPDST--VKVGFTADNSVTLTQGTQAVIRYDNLFGDRYLALEEGAGGLTI 120
Query: 124 IFQIATER 131
+ T
Sbjct: 121 LKPGQTIP 128
>gi|29832440|ref|NP_827074.1| mce-related protein [Streptomyces avermitilis MA-4680]
gi|29609559|dbj|BAC73609.1| putative mce(mammalian cell entry)-related protein [Streptomyces
avermitilis MA-4680]
Length = 392
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 64/200 (32%), Gaps = 5/200 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G ++ L + + G GL VR G+ V
Sbjct: 74 NPVVIGAVGLTFLALLTVAAFNADSLPLIGG-GETYSAAFSE-AGGLKPGDEVRIAGVKV 131
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + LD + H I+ D T A+IR + + G Y+ L +
Sbjct: 132 GKVKDVDLDGD---HVKVTFKIKGDPGFGTETGASIRVKTILGAKYLALRPKGPGQLKPG 188
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + +++ + I ++ + +I +
Sbjct: 189 SEIPLKRTVPAYDVVQAFSDLTTTTEKVDTDQLAKALDTISTTFQDSPAEVRASIKGLSK 248
Query: 186 ISTVLANNISHIDKMMHTTQ 205
IS +A+ + +++
Sbjct: 249 ISRTVASRDKALGELLDHAN 268
>gi|317484536|ref|ZP_07943444.1| hypothetical protein HMPREF0179_00795 [Bilophila wadsworthia 3_1_6]
gi|316924197|gb|EFV45375.1| hypothetical protein HMPREF0179_00795 [Bilophila wadsworthia 3_1_6]
Length = 324
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/319 (14%), Positives = 94/319 (29%), Gaps = 25/319 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M T +G FVV +I S + + ++ GS+ GLS S V F
Sbjct: 1 MSKPANKTLIGAFVVGATALLLLAIAVFG-SGKLFQTTSRYVLFFDGSISGLSVGSPVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPNHS---LAKALIRP-------------------DTPLYPSTT 98
G+PVGR+V + L + N + D +
Sbjct: 60 RGVPVGRVVEIRLTGDLDNLVFQTPVFIELNKKDEGRFSVSDGDISKKEYLDRLVSHGLR 119
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIAT--ERNQRAMITATPSGINYFISNAENTSK 156
AT+ TQ L + + + I E + I PS + +
Sbjct: 120 ATLATQSLLTGQLMIEMDFYPRSQIPYPIKEVKEYDDVPEIPTIPSQFDNILQTLTTLPY 179
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
S+ + T I I ++ + T ++
Sbjct: 180 DDIASNVLDITEGVKKILSNSGTEQLIGHIDKLVVQLQDIGTNLDKTLTSIRGLAEPYTK 239
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
TD S + L +++ + + +++ + + TV ++ + + E
Sbjct: 240 LAQDTDKRLSAALEQASHVLSRIDNVAKETEMTVVSARGVVSKNSTTVIELNQAIREITE 299
Query: 277 VGQKIDHLLSDFSSKMKSK 295
+ + + ++
Sbjct: 300 AARAVRVFANTLERNPEAV 318
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 86/249 (34%), Gaps = 5/249 (2%)
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+D ++ T V + +++D S + + + + L + + +
Sbjct: 75 DLDNLVFQTPVFIELNKKDEGRFSVSDGDISKKEYLDRLVSHGLRATLATQSLLTGQLMI 134
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR--S 313
D + + +I + S F + +++ T + + ++
Sbjct: 135 EMDFYPRSQIPYPIKEVKEYDDVPEIPTIPSQFDNILQTLTTLPYDDIASNVLDITEGVK 194
Query: 314 SISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKD 371
I + I + +++I +NL+ + L ++ + ++ +
Sbjct: 195 KILSNSGTEQLIGHIDKLVVQLQDIGTNLDKTLTSIRGLAEPYTKLAQDTDKRLSAALEQ 254
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
A + + +++ + S + S + + ++ +R++ E N ER
Sbjct: 255 ASHVLSRIDNVAKETEMTVVSARGVVSKNSTTVI-ELNQAIREITEAARAVRVFANTLER 313
Query: 432 NPQDIVWGR 440
NP+ ++ G+
Sbjct: 314 NPEAVLRGK 322
>gi|145223096|ref|YP_001133774.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215582|gb|ABP44986.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 341
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 83/299 (27%), Gaps = 9/299 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+++ T + F V L + + + + A + L + +VR G
Sbjct: 2 TRSTATLIK-FTVFGLVMAVLTAFLFLVFSDTRTGAANEYSAVFKDASRLKSGDTVRIAG 60
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I VG + + L + L T L T IR L G Y+EL +
Sbjct: 61 IRVGTVKDVELQADKS--VLVTFDADRSTQLTTGTNVAIRYLNLVGDRYMELVDTPDSNQ 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPL 176
+ + R + + ++ + S + +Q ++
Sbjct: 119 ILPAGSRIPEDRTAPALDLDVLLGGLRPVIQGLNPQDVNALTSSLIQILQGQGGTLDSLF 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + +++ ID + D + D + +
Sbjct: 179 AKTSSFTTSLADNNQVIEQLIDDLRTVLDTLAEDGDEFSGAIDKLDQLVGGLAEDRDPIG 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + + +TV ++ ++D L +
Sbjct: 239 TAITALDNGTASIADLLSRGRAPLSSTVDELSRLAPLVDNDLDRLDATLQRLPEIYRKL 297
>gi|170691391|ref|ZP_02882556.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
gi|170143596|gb|EDT11759.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
Length = 552
Score = 85.0 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/449 (9%), Positives = 115/449 (25%), Gaps = 52/449 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY-----------------DGPMAEVIIRIPGSVDG 51
VG VS L Y + + I S+
Sbjct: 134 RVGASGVSGLTTLLSGAYIGADAGHSPDSEKNFVGLETPPPITGDQKGHQFILHGDSLGS 193
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++VG LD++ + P R +G+
Sbjct: 194 IDIGSPIFYRRVQVGQVVGFSLDKDGTG---VTMQVFVSAPFDQYVGTNSRWWHASGVDL 250
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K S + + +
Sbjct: 251 RLDSSGFKLNTQSLATVIVGG--------LSFQSPPGQGVGAQAPNNMTFRLGSDEGDAM 302
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E + ++ ++ + T + + +
Sbjct: 303 REPDGVPLRVVMNFNQSLRGLSVGAPVDFRGIVLGQVTNIGIDYDPKTRSFTMPVTMNIY 362
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + +R ++ +D +
Sbjct: 363 PDRLGKRFRETAPTPGSLAGQTLLQQLVKHGLRGQLRTGNLITSQLYVALDIFPKAPPAT 422
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L I ++ ++ ++ I + D+ + I +NLN + + +
Sbjct: 423 VDVASDPLELPTIPNTLDELQLQVADIAKKLDKVP--------FDQIGNNLNSALKNADQ 474
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L +++ + A+ + + T + +D+
Sbjct: 475 LFKRLD--------TEVVPQARDTLAAAKQTFGSAEATLQQ--------DSPLQSDVHQA 518
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T+ + + ER+P+ ++ G+
Sbjct: 519 LQELTRTLQSLNALSDYLERHPESLLRGK 547
>gi|113475810|ref|YP_721871.1| methyl-accepting chemotaxis sensory transducer [Trichodesmium
erythraeum IMS101]
gi|110166858|gb|ABG51398.1| methyl-accepting chemotaxis sensory transducer [Trichodesmium
erythraeum IMS101]
Length = 476
Score = 85.0 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/423 (13%), Positives = 128/423 (30%), Gaps = 17/423 (4%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ WL + I+ S G+ +SVR+ GI VG++V +
Sbjct: 24 ALMLWLKGVE-LGKRSYKFIVEF-ESASGIELGTSVRYRGIDVGQVVKIKPGSNG---VD 78
Query: 83 AKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I+P D + G I++ + ++ + I
Sbjct: 79 ITLEIQPEDLIIPRDVYIQGNISSFIGTAQIDIIPRNRIPESEISATALSSNCPEIIICN 138
Query: 142 SGINYFISNAENTS---KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
+ + E I + + N K + AN ++ LA +S +
Sbjct: 139 NDRLQGEAGVEMQQLLRAGIRLIDLYSDPELFNNVKIIAENTANASAEASKLAKQLSDLS 198
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ + ++ N + T + + + ++ + S
Sbjct: 199 ETIKKEMKGLSQYLREDIDNITGIIRTEVGSLTQTLEGEIGGLTQTLEGEISGLTNTVEK 258
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
+ + + + + + + + K+ S ++ + +
Sbjct: 259 DLDSLTKTLEKEVNDISNQVTTVTETMKESTKKVSSAAVASANSVEEVANQFSLTVEQIN 318
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
+ R +++T+N IE T L + ++ ++ + L ++A
Sbjct: 319 EIVNTNRSTLVATLNNIEKTTEELVGLVASLSPMIGELERGEFISNLEILSENAVETSAN 378
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL--NNFERNPQDI 436
RD S +N I Q L+ + +Q+ + DD F ++ + I
Sbjct: 379 LRDISTDLNSPTNII------MLQQTLDSARATFENVQKMSSDLDDITGDERFRKSLKKI 432
Query: 437 VWG 439
+ G
Sbjct: 433 ING 435
>gi|307544521|ref|YP_003897000.1| mammalian cell entry related domain protein [Halomonas elongata DSM
2581]
gi|307216545|emb|CBV41815.1| mammalian cell entry related domain protein [Halomonas elongata DSM
2581]
Length = 154
Score = 85.0 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/120 (27%), Positives = 52/120 (43%), Gaps = 4/120 (3%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSV 58
M+ SK VGLF+++ + F +S + E+ ++ GL + V
Sbjct: 1 MKRSKMMELGVGLFMLAGILGLVFLGLRVSGLSLERPTSSFELEANF-ANIGGLKPRARV 59
Query: 59 RFNGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + Y H + + + L +TA I T GL G YI LS
Sbjct: 60 TMAGVTVGRVRSIELDTDWYDAHVVMELDGSLEGTLPEDSTAAILTSGLLGEQYIGLSVG 119
>gi|323189186|gb|EFZ74470.1| mce related family protein [Escherichia coli RN587/1]
Length = 183
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F+++ L + F + ++ GL S V
Sbjct: 1 MQTKKNEIWVGIFLLAALLAALFVCLKAVNVTSIRTEPTYTLYATFDNIGGLKARSPVSI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + + +
Sbjct: 120 DPELGTAILKDGDTIQDTKSAMVLED 145
>gi|83593773|ref|YP_427525.1| hypothetical protein Rru_A2438 [Rhodospirillum rubrum ATCC 11170]
gi|83576687|gb|ABC23238.1| Mammalian cell entry related [Rhodospirillum rubrum ATCC 11170]
Length = 151
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 44/119 (36%), Gaps = 5/119 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T +G V+ + F Y + G + V GL T S VR
Sbjct: 1 MRN-PIETIMGAVVLVVAAFFLVFAYNTADLKAVTG--YPIQAVFLK-VGGLVTGSDVRI 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
NG+ VG + G LD + I D + + A I + GL G Y+ L +
Sbjct: 57 NGVKVGTVTGQTLDSDTYEAV-VDMTISGDIHIPEDSRAAIVSDGLLGGKYVRLEPGQS 114
>gi|118619249|ref|YP_907581.1| MCE-family protein Mce4D [Mycobacterium ulcerans Agy99]
gi|118571359|gb|ABL06110.1| MCE-family protein Mce4D [Mycobacterium ulcerans Agy99]
Length = 477
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 91/283 (32%), Gaps = 11/283 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+V+++ +Y L + ++ S G+ VR G+PVGRI +
Sbjct: 16 IVALVAALVGGLYVLFSGGESGRK----VVAYFTSAVGIYPGDEVRILGVPVGRIDSIEP 71
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ D + A I + L +I+L+ + + A+
Sbjct: 72 RPAD---VKITMSVSNDVKIPRDAQALIVSPNLVAARFIQLTPVYTGGAVVPDGASIDLS 128
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R A P + + + ++S ++ +Q + T+
Sbjct: 129 RT---AIPVEWDEVKESLTQLAVQLSPAAGELQGPLGAAINQAADTLNGNGDSFHNALRE 185
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN-IQVSSNN 252
+S + + ++ S+ ++ + A + V+Q+L + + N
Sbjct: 186 LSQVAGRLGDSRNDIFSTVKNLQVLVDALSQSNEQIVQFAGHVASVSQVLADSSRNLDNT 245
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + +RE T E ++ L S + +
Sbjct: 246 LGTLNQALSDIKGFLRENNSTLIETVNQLGDLTQTLSDQSDNI 288
>gi|325523868|gb|EGD02092.1| paraquat-inducible protein B [Burkholderia sp. TJI49]
Length = 539
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/407 (7%), Positives = 101/407 (24%), Gaps = 38/407 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S V + + VG++VG LD+ + + P
Sbjct: 165 DQKGTQYVLR-GDSLGSVDIGSPVYYRRVQVGQVVGFSLDKGGTG---VTFNVFVNAP-- 218
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y + + + + + T S +
Sbjct: 219 ----------------YDQYVGMNSRWWQASGVDLRLDSSGLKLNTQSLATVILGGI--- 259
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + A+ + + +
Sbjct: 260 ---AFQTPPNQETGSTAPNNTTFRLAADEGDAMRDPDGQPLQVVMNFNQSLRGLGVGAPV 316
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +T++ + N+ RE +
Sbjct: 317 DFRGIVLGEVTNIGIDYDPKTKNFTMPVTMNVYPERLGRRFRETIESKGEPARREIVERL 376
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G + + + F + + + + +
Sbjct: 377 VQHGLRGQLRTGNLLTSQLYVALDFFPKAPPAKIDVSHQPLELPTVPNTLDELQLQVADI 436
Query: 335 IENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ + + +S + + + + +A+ + + T +
Sbjct: 437 AKKLDKVPFDQIGANLNSALSNADKLFKQLDTQ-VAPEARDTLSAAKQTFSTAEATLQQ- 494
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 495 -------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLIKGK 534
>gi|120405351|ref|YP_955180.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958169|gb|ABM15174.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 342
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 5/131 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GLF ++ +F I ++ P + +V GL VR G+ VG
Sbjct: 9 AARLGLFTMACAAGTFALIMIFAQLR--FAPSNHYDAQFV-NVSGLKAGEFVRIAGVEVG 65
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + ++++ + L T A IR L G Y+EL + +
Sbjct: 66 KVKRIAVNED--GTATVTFGADDSVLLTEGTRALIRYDNLIGDRYLELQEGAGAVQALEP 123
Query: 127 IATERNQRAMI 137
T R
Sbjct: 124 GGTIPVARTQP 134
>gi|296163933|ref|ZP_06846569.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900714|gb|EFG80084.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 514
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 94/289 (32%), Gaps = 5/289 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F + + + +L + + + +P S GL ++V
Sbjct: 1 MLTRRLRLQLTVFTIVTMLAMSVLGWHYLRLPSVVGMGQYSLEVDLPTS-GGLYPTANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI VG++ + ++ A I + ++A + + G YI+L + +
Sbjct: 60 YRGITVGKVTRVEPTEQG---VRATLRISDQYKIPIDSSANVHSVSAVGEQYIDLVSAQN 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
K T N P+ + KI+ + + + L
Sbjct: 117 PAKYFSPGQTITNSTVPKRIGPTLDTVNHTLDVLPKDKIAGLLDETAQAVGGLGPALQRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + ++I N+S ++ ++ S + + A +++
Sbjct: 177 VDSTQSIVGDFKTNLSDVNDIVQNAAPIIDSQANSRDPIERWAHNLNTLDAQAAEKDKQL 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
IL + +++ V T+ ++ ++ + +
Sbjct: 237 KSILGQVAPTADQIKAVLGDVRETLPQTLANVAIVADLLKRYNKNVEQL 285
>gi|120401389|ref|YP_951218.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954207|gb|ABM11212.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 342
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 82/302 (27%), Gaps = 11/302 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G+F+ +F + ++ DG + +V GL VR G+ VG++
Sbjct: 11 RLGIFLAVCALGTFVLLSVFAQFRFGDGKTYQAE---FSNVSGLKDGDLVRIAGVEVGKV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + L T A IR L G Y+ L +
Sbjct: 68 KSITVGSD--AVVTVSFDTDDTVVLTDGTRAAIRYDNLFGGRYLALEEGVGGLHEMSPGH 125
Query: 129 TERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
T R + E ++ + +Q I L A
Sbjct: 126 TIPLARTEPALDLDSLIGGFRPLFRALDPEQVNELSAQLIGALQGQGPTIGSFLEQAAAV 185
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
T++ + + SD +T T + + V
Sbjct: 186 TNTLADRDQLIGEVVVNLNTVLGSIGQQSDRFDTAVTSLSELVHGLAERRTDISDAVAHT 245
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ + + VH+ + +D+LL+ + ++
Sbjct: 246 NSATASLADLLAATRPPLQRVVHETDRAAAIAVADHEYLDNLLNTLPDRYQALGRQGMYG 305
Query: 303 NI 304
+
Sbjct: 306 DF 307
>gi|270159820|ref|ZP_06188476.1| conserved hypothetical protein [Legionella longbeachae D-4968]
gi|269988159|gb|EEZ94414.1| conserved hypothetical protein [Legionella longbeachae D-4968]
Length = 276
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/267 (17%), Positives = 94/267 (35%), Gaps = 5/267 (1%)
Query: 25 IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
+ WLS + + + GL+ D+ V++NG+ VG + + L+Q P
Sbjct: 1 MLWLS-IGFNQKKYTTYTVYMHEAASGLTQDAPVKYNGVQVGYVKEIRLNQNDPRQVEIL 59
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
I TP+ ST AT+ +QG+ G++YI LS I ++ E +I + PS
Sbjct: 60 LDIEEGTPVTTSTFATLNSQGITGVSYIGLSASTSNLTPITKMPGEP--YPVIPSKPSVF 117
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
N S + S+ + + Q+I + I + + + +
Sbjct: 118 NQLDSILKKVSEDMGIVTTEAQRIFNEENAKH--IKHILSNIDSFSKDIADNGKNVNVFM 175
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ +S + S ++ + N + + + N K S + +
Sbjct: 176 ENLAKTSRDFPHVIEELKVGISKFNLMAESLSKAGNSVSKTMNSGKNTLDKISQESLPPA 235
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ +K+ + +
Sbjct: 236 TILLRRLNAISANLEKVSSEMRQNPAV 262
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 50/142 (35%), Gaps = 5/142 (3%)
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA----- 361
+ ++ + + + I ++ I++ + ++ D+ + M + S
Sbjct: 129 EDMGIVTTEAQRIFNEENAKHIKHILSNIDSFSKDIADNGKNVNVFMENLAKTSRDFPHV 188
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNH 421
++E + +++ + S N L SQ L L+R+L +
Sbjct: 189 IEELKVGISKFNLMAESLSKAGNSVSKTMNSGKNTLDKISQESLPPATILLRRLNAISAN 248
Query: 422 FDDCLNNFERNPQDIVWGREKG 443
+ + +NP ++ G +
Sbjct: 249 LEKVSSEMRQNPAVVIRGSKPP 270
>gi|298373771|ref|ZP_06983760.1| mce related protein [Bacteroidetes oral taxon 274 str. F0058]
gi|298274823|gb|EFI16375.1| mce related protein [Bacteroidetes oral taxon 274 str. F0058]
Length = 293
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 92/294 (31%), Gaps = 14/294 (4%)
Query: 1 MESK-NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ K + +GL V + FF + +L N + + +DGL ++V
Sbjct: 1 MDRKISKELKIGLTFVITIIILFFGLNFLKGINIFSSTNTYYAVY--KDIDGLVPSNTVS 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G VG++ + + L + + D L T + +GL I++S
Sbjct: 59 IKGYKVGQVKKVRYNFNSEKPFLVEVTVNKDIKLPKGTVFYLADEGLISGKMIDISLGTG 118
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + R + +IS +++ I N+ LT
Sbjct: 119 SELIKPKDTVPTDVR----------DPLTEKISEYMPQISSVISNLEAITHNVNVLLTDE 168
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
S + + S T L L++ + K+
Sbjct: 169 SLKHAIGSLGPTVDNLNKTINQLRASTASLPSTMDKFNGIATTLDNKLNQFDVNAIMTKL 228
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
N L N + + + + ++D R T Q D+LL D K
Sbjct: 229 NNTLANAENFTQKLNNRNSSLGLLLND-RTTYDKLNSTIQSADNLLIDIKENPK 281
>gi|294673983|ref|YP_003574599.1| Mce-like protein [Prevotella ruminicola 23]
gi|294472314|gb|ADE81703.1| Mce-like protein [Prevotella ruminicola 23]
Length = 300
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 87/289 (30%), Gaps = 6/289 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + L ++ L +F +++L + G + V GLS S +
Sbjct: 1 MKKFSKEIQIALVAIAGLLVLYFGLHFLKGMTLFSGDNKYYVK--FKDVSGLSVASPIFA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG VG + + D + +A + + + + A I T L G + L
Sbjct: 59 NGYRVGVVEEIMFDYQNTGEIVAAIDVDTELSVPKGSRAEIATD-LMGNVKVLLVLGNAA 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ T + + + I + K+ + ++ + +
Sbjct: 118 DGMVAPGDTITGSQQVGAMGKAA--DMIPAVQQMLPKLDSILASVNTLLADPAIANSLHN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T ++ + Q+ ++ + + M A + VN
Sbjct: 176 VDQITADLTRTSHDLSLLTAQLNRQMPQMLQNADGVLANTNQITKDISNMDFAATMTSVN 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
L+N++ + + + D D L+ D
Sbjct: 236 TTLKNVEQMTAALNSREGTLGLLMRDPS-LYYNLNSTMMHADSLMLDLK 283
>gi|291481512|ref|YP_586224.2| paraquat-inducible protein B [Cupriavidus metallidurans CH34]
gi|288237352|gb|ABF10955.2| paraquat-inducible protein B [Cupriavidus metallidurans CH34]
Length = 508
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/395 (8%), Positives = 96/395 (24%), Gaps = 34/395 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
V L S V F + VG+I LD + + + P
Sbjct: 143 SEDVGSLDVGSPVYFRRLQVGQITAFDLDSDGRG---VTLKVFVNAP------------- 186
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
Y + + + T S ++ I
Sbjct: 187 -----YDRFVQQGTRFWHASGVDVSLDTGGLRVNTQSVVSILIGGIG-----FETPYESQ 236
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ + + + + ++ T + + + I ++
Sbjct: 237 DQPVAAAGSTFALFHDRVTALKRQDSVVHHYVVNFTDTVRGLAVGAPIEFRGIVIGEVTG 296
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + + ++ RE G ++
Sbjct: 297 IYTRYDPVTRKFSIPVEINFYPGRFTSRYRTGAGAGPVTETPRELGDFLVSQGLRMQLRN 356
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + F + + D + S + + S
Sbjct: 357 GNLLTGQLYIALDFFPNAPKAKINWNENPPEFPSIQGDLQSLQQSLTRVVAQLNSVPFAQ 416
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+ + M + + ++ L A+ + + R T + N + +
Sbjct: 417 IGQNTKDMLRNATSLLTRLDSELVPQARDTLASARSTLDSANTALGP--------DSALQ 468
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + +++L T + E++P+ ++ G+
Sbjct: 469 QNTADAMKELARTAAALRSLADYLEQHPEALIRGK 503
Score = 51.1 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 24/58 (41%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
V + ++ + D + ++ +V GL+ + + F GI +G + G+
Sbjct: 240 VAAAGSTFALFHDRVTALKRQDSVVHHYVVNFTDTVRGLAVGAPIEFRGIVIGEVTGI 297
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 32/96 (33%), Gaps = 6/96 (6%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQ 75
I+ WL+ + + +GL + ++F + +G + + L
Sbjct: 3 IIAVLIGG--WLAVKAVI-EQGPTITVSFKT-GEGLEAGKTKIKFKDVDIGLVKSVALSP 58
Query: 76 EYPNHSL-AKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + A+ L +T + ++G +
Sbjct: 59 DSKRVVVTAEIAKDAGRLLVDNTRFWVVRPRISGGS 94
>gi|162660706|gb|EDQ48497.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 313
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+FV+ + WL+R + E + + GL ++VR+ G+ VG++
Sbjct: 4 GIFVLVVAALLAGLAIWLTRDTR---QYNEYELSTKDGISGLQAQAAVRYKGVAVGKVTQ 60
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
+ D + + L + I +TP+ P+T A + QG+ G+ +++
Sbjct: 61 IGFDPQTNGNVLIRIAIGVNTPITPTTFAVLGYQGVTGLAHVQ 103
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 14/200 (7%), Positives = 43/200 (21%), Gaps = 25/200 (12%)
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
V + + L S + + ++ + +
Sbjct: 93 YQGVTGLAHVQLDDADQPQPQLPPGPSGLPRLPLRSSPLSMLADQGQVLLERADEISRRL 152
Query: 324 QRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTS 383
+ N+ ++ +L ++ + L DA + + S
Sbjct: 153 SDMLDTDNQKRVSQALENIAAAAAGVQQLTQNLDRTL-STQVPQLAADAHNTLQSLEKAS 211
Query: 384 EKINRYIPSIGNNLQNFSQS------------------------GLNDIQNLVRKLQETV 419
+ + ++ + + +
Sbjct: 212 NGASAVASELQQTVRRVNAQDGPLEQIAQSTRALTRMADSLGRSTVPHANRAADDVSRAA 271
Query: 420 NHFDDCLNNFERNPQDIVWG 439
+ F NPQ +++G
Sbjct: 272 RQMGTAASRFSDNPQAVIYG 291
>gi|217031803|ref|ZP_03437306.1| hypothetical protein HPB128_199g11 [Helicobacter pylori B128]
gi|216946455|gb|EEC25057.1| hypothetical protein HPB128_199g11 [Helicobacter pylori B128]
Length = 251
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
I WL DG E ++ + G++T+S V + GI VG ++ + ++
Sbjct: 1 MVGFILWLGHLGLDDGKYYEYVVYTDKDLGGIATNSPVNYKGIQVGNVIKVGFAKDKVGV 60
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+I+ + + + ++G G+ +
Sbjct: 61 VRLDLMIKSSVKIRKDSKVAVSSRGFMGLKF 91
>gi|41406207|ref|NP_959043.1| Mce1B [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41394555|gb|AAS02426.1| Mce1B [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 359
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 6/117 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +GL + + + + + + GP V GL VR
Sbjct: 1 MRVRGP--LIGLSLFMAIAIAVTWMVYATLRRDVAGPTTPYAAMFTD-VYGLRVGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + L + ++ D LY +T A++ Q + G Y+ LS
Sbjct: 58 AGVRVGRVEKVELAG---KLAKVSFIVENDQRLYGNTVASVTYQNIIGQRYLGLSLG 111
>gi|258649015|ref|ZP_05736484.1| virulence factor Mce family protein [Prevotella tannerae ATCC
51259]
gi|260850639|gb|EEX70508.1| virulence factor Mce family protein [Prevotella tannerae ATCC
51259]
Length = 308
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/291 (10%), Positives = 91/291 (31%), Gaps = 5/291 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ N + L + + + I ++ N + + ++ GL+ ++V
Sbjct: 1 MKIFNREVKIALTAIVAIVLVYLLINFMKGINVFKSSNTYYV--RFDNIAGLAVSNAVYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG PVG + G+ D + + + + T A + T L G + L
Sbjct: 59 NGYPVGIVRGIQYDYGNHERVVVAIELDKEMHMPRGTKAELVTS-LMGGVTMSLMLGPNP 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ Q T + + + K+ ++ ++ + T
Sbjct: 118 TDNLAQGDTISGGLHEGAV--EKVEALMPTIMDMLPKLDSIVTNVARLSADPALAQTLRN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + + Q+ H +++ +++ + +++ ++
Sbjct: 176 TAEITNNLRRTSAKLDAMVGRDLPQMMQHLNNTSRNVERLSNNLAAINLQETMNEVNASL 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + N + +N+ + +++ ++ +S S
Sbjct: 236 AEVRQFSANINAMTNDLNSKLNSQDNTFGLLLNDRKLYDNLNRTVSSADSL 286
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 28/180 (15%), Positives = 64/180 (35%), Gaps = 15/180 (8%)
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
V V T ++ K+D ++++ + + L N A+ T+N+R + + +
Sbjct: 132 HEGAVEKVEALMPTIMDMLPKLDSIVTNVARLSADPALAQTLRNTAEITNNLRRTSAKLD 191
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTF 379
+ + + + + +++N A + ++
Sbjct: 192 AMVGRDLP-------------QMMQHLNNTSRNVERLSNNLAAINLQETMNEVNASLAEV 238
Query: 380 RDTSEKINRYIPSIGNNLQNFSQS--GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
R S IN + + L + + L + + L L TV+ D L N + +P+ V
Sbjct: 239 RQFSANINAMTNDLNSKLNSQDNTFGLLLNDRKLYDNLNRTVSSADSLLINVKAHPKRYV 298
>gi|311744206|ref|ZP_07718010.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311312379|gb|EFQ82292.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 375
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 5/131 (3%)
Query: 3 SKNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + FV+ + + +L ++ G V + +PGS GL S V +
Sbjct: 2 RRGIKVRLVAFVLLSAVSLLYVGGSYLGVVDRLLGRGYTVQVTLPGS-GGLFEGSEVTYR 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +GR+ + + + L A I + T + G Y+ E
Sbjct: 61 GVTIGRVTSMTVRDDG---LLVTARIDEGVEVPADTAVFVYNLSAVGEQYLSFEPGSTEG 117
Query: 122 KTIFQIATERN 132
+ Q R
Sbjct: 118 PMLGQGDVVRG 128
>gi|163788063|ref|ZP_02182509.1| ABC transporter, permease component [Flavobacteriales bacterium
ALC-1]
gi|159876383|gb|EDP70441.1| ABC transporter, permease component [Flavobacteriales bacterium
ALC-1]
Length = 330
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 49/131 (37%), Gaps = 1/131 (0%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + +G FV+ +Y + + + +V+GL ++VR++
Sbjct: 3 NTNSQKLRLGSFVLIGTILFIIGVYLIGQRQNMFKKTFTISTYF-QNVNGLQKGNNVRYS 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
GI +G + + + + + + + ++ ATI + GL G + + +
Sbjct: 62 GINIGTVKDIGMINDSTIKVDMAIQEKIISHIKKNSIATIGSDGLVGNMIVNIVPGKGIS 121
Query: 122 KTIFQIATERN 132
+ I +
Sbjct: 122 EAIENNDIIES 132
>gi|296161035|ref|ZP_06843846.1| Mammalian cell entry related domain protein [Burkholderia sp.
Ch1-1]
gi|295888734|gb|EFG68541.1| Mammalian cell entry related domain protein [Burkholderia sp.
Ch1-1]
Length = 552
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/453 (9%), Positives = 115/453 (25%), Gaps = 52/453 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY-----------------DGPMAEVIIRIPGSVDG 51
VG VS L Y + + + S+
Sbjct: 134 RVGASGVSGLTTLLSGAYIGADAGHSPDTEKDFVGLETPPPITGDQKGHQFVLHGDSLGS 193
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++VG LD++ + P R +G+
Sbjct: 194 IDIGSPIFYRRVQVGQVVGFSLDKDGTG---VTMQVFVSAPFDQYVGTNSRWWHASGVDL 250
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K S + + +
Sbjct: 251 RLDSSGFKLNTQSLATVIVGG--------LSFQSPPGQGVGAQAPNNMTFRLGSDEADAM 302
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E + ++ +I + + + + +
Sbjct: 303 REPDGVPLRVVMNFNQSLRGLSIGAPVDFRGIVLGQVTNIGIDYDPKSRSFTMPVTMNLY 362
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + +R ++ +D +
Sbjct: 363 PDRLGRRFRETAPAPGSLAGQTMLQQLVKHGLRGQLRTGNLITSQLYVAVDIFPKAPPAT 422
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L I ++ ++ ++ I + D + I +NLN + + +
Sbjct: 423 VDVASDPLELPTIPNTLDELQLQVADIAKKLDAVP--------FDQIGNNLNSALKNADQ 474
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L ++++ + A+ + + T + +D+
Sbjct: 475 LFTRLDK--------EVVPQARDTLAAAKQTFGSAEATLQQ--------DSPLQSDVHQA 518
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+++L T+ + + ER+P+ ++ G+
Sbjct: 519 LQELTRTLQSLNALSDYLERHPESLLRGKSGDK 551
>gi|254773149|ref|ZP_05214665.1| Mce1B [Mycobacterium avium subsp. avium ATCC 25291]
Length = 357
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GL + + + + + + GP V GL VR G+ VGR+
Sbjct: 5 LIGLSLFMAIAIAVTWMVYATLRRDVAGPTTPYAAMFTD-VYGLRVGDDVRMAGVRVGRV 63
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ L + ++ D LY +T A++ Q + G Y+ LS
Sbjct: 64 EKVELAG---KLAKVSFIVENDQRLYGNTVASVTYQNIIGQRYLGLSLG 109
>gi|253798985|ref|YP_003031986.1| MCE-family protein mce3B [Mycobacterium tuberculosis KZN 1435]
gi|289554256|ref|ZP_06443466.1| MCE-family protein mce3B [Mycobacterium tuberculosis KZN 605]
gi|297634536|ref|ZP_06952316.1| MCE-family protein mce3B [Mycobacterium tuberculosis KZN 4207]
gi|297731524|ref|ZP_06960642.1| MCE-family protein mce3B [Mycobacterium tuberculosis KZN R506]
gi|313658857|ref|ZP_07815737.1| MCE-family protein mce3B [Mycobacterium tuberculosis KZN V2475]
gi|253320488|gb|ACT25091.1| MCE-family protein mce3B [Mycobacterium tuberculosis KZN 1435]
gi|289438888|gb|EFD21381.1| MCE-family protein mce3B [Mycobacterium tuberculosis KZN 605]
gi|328458740|gb|AEB04163.1| MCE-family protein mce3B [Mycobacterium tuberculosis KZN 4207]
Length = 342
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/303 (12%), Positives = 78/303 (25%), Gaps = 11/303 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G+ + L +F I DG +V L T VR G+ VG+
Sbjct: 10 VRLGVSLAVCLLTAFLLIAVFGEVRFGDGKTYYAEFA---NVSNLRTGKLVRIAGVEVGK 66
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + ++ + + L T A IR L G Y+ L +
Sbjct: 67 VTRISINPD--ATVRVQFTADNSVTLTRGTRAVIRYDNLFGDRYLALEEGAGGLAVLRPG 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT------TTIA 181
T R + ++ Q + + T + A
Sbjct: 125 HTIPLARTQPALDLDALIGGFKPLFRALNPEQVNALSEQLLHAFAGQGPTIGSLLAQSAA 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T++ I + +D + T + K V
Sbjct: 185 VTNTLADRDRLIGQVITNLNVVLGSLGAHTDRLDQAVTSLSALIHRLAQRKTDISNAVAY 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
++ ++ + V + +D+LL+ K ++
Sbjct: 245 TNAAAGSVADLLSQARAPLAKVVRETDRVAGIAAADHDYLDNLLNTLPDKYQALVRQGMY 304
Query: 302 ENI 304
+
Sbjct: 305 GDF 307
>gi|91214839|ref|ZP_01251812.1| hypothetical protein P700755_18279 [Psychroflexus torquis ATCC
700755]
gi|91187266|gb|EAS73636.1| hypothetical protein P700755_18279 [Psychroflexus torquis ATCC
700755]
Length = 310
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 94/289 (32%), Gaps = 12/289 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG+ + + F +L +N ++ I +V+GLS + V NG VG
Sbjct: 4 ELKVGILAIVAIGLLIFGYNFLKGNNIFNSSRVFYAIY--DNVEGLSPSAPVSINGYQVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + L I D ++ A I GL G +++ +
Sbjct: 62 TVTDIQFIK--SGQLLVTMNINTDFNFSKASEAQIYGGGLIGGKSMQIELDNMSTEAAKS 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
T ++ +N ++ ++ + + T
Sbjct: 120 GDTLQSSVEEGLI--ELVNEKLTPLKDKISNAVVEVDTLLSSFNYVFDVDTRNNLRYSIK 177
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ ++ + ++ + +T +L KM + + N+I++N
Sbjct: 178 NLNETLTSLNLSAKKIEGVLNSNTDNINSTIENFRSTSDNLSKMSDTLSKIEFNRIVQNA 237
Query: 247 QVSSNNFVKSSDQVINTV------HDVRETTQTFQEVGQKIDHLLSDFS 289
+ N + S+++ N + + + ++++ LLSD
Sbjct: 238 DETLLNLKEISNKLKNGDGSLGKLMNDDQMYINIENATKELEELLSDVK 286
>gi|99081362|ref|YP_613516.1| hypothetical protein TM1040_1521 [Ruegeria sp. TM1040]
gi|99037642|gb|ABF64254.1| Mammalian cell entry related [Ruegeria sp. TM1040]
Length = 150
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V+++ F + ++ G + S++G+S + VR
Sbjct: 1 MTHSTTEVLTGGLVLAVAAGFAFYAAQAAGLSR-GGDSYPLTASF-RSLEGVSVGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + L+ E + + + + I ++GL G ++E+
Sbjct: 59 AGVKIGTVTDVALNAETFR-ADTTFSVDKSIMIPDDSAIVIASEGLLGGNFVEVMPGGSP 117
Query: 121 KK 122
Sbjct: 118 FN 119
>gi|326383824|ref|ZP_08205509.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197588|gb|EGD54777.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 339
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 56/153 (36%), Gaps = 7/153 (4%)
Query: 1 MESKNYYTSV--GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M + +Y T V LFV+ + + + L GP E I+ +GL + V
Sbjct: 1 MNTLSYRTIVKSALFVIVGVVAAALVMNTLRV--PVHGPSDEYILVFTD-AEGLVDGNPV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNH--SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
+ +G+ +GR+ G+ LD + + + + PL A+IR + G YI +
Sbjct: 58 KMSGVRIGRVDGVSLDPQDDGTALARVRVRVESGHPLPEHVRASIRYGDMLGARYIAIDD 117
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ + +N F
Sbjct: 118 AGPDGPERDGNTVTAAATTPPVNLTALMNGFQP 150
>gi|187922715|ref|YP_001894357.1| hypothetical protein Bphyt_0709 [Burkholderia phytofirmans PsJN]
gi|187713909|gb|ACD15133.1| Mammalian cell entry related domain protein [Burkholderia
phytofirmans PsJN]
Length = 552
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/453 (9%), Positives = 116/453 (25%), Gaps = 52/453 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY-----------------DGPMAEVIIRIPGSVDG 51
VG VS L Y + + + S+
Sbjct: 134 RVGASGVSGLTTLLSGAYIGADAGHSPDTEKNFVGLETPPPITGDQKGHQFVLHGDSLGS 193
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++VG LD++ + P R +G+
Sbjct: 194 IDIGSPIFYRRVQVGQVVGFSLDKDGTG---VTMQVFVSAPFDQYVGTNSRWWHASGVDL 250
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K S + + +
Sbjct: 251 RLDSSGFKLNTQSLATVIVGG--------LSFQSPPGQGVGAQAPNNMTFRLGSDEADAM 302
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E + ++ +I + T + + +
Sbjct: 303 REPDGVPLRVVMNFNQSLRGLSIGAPVDFRGIVLGQVTNIGIDYDPKTRSFTMPVTMNLY 362
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + +R ++ +D +
Sbjct: 363 PDRLGRRFRETAPAPGSLAGQTMLQQLVKHGLRGQLRTGNLITSQLYVAVDIFPKAPPAT 422
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L I ++ ++ ++ I + D+ + I +NLN + + +
Sbjct: 423 VDVASDPLELPTIPNTLDELQLQVADIAKKLDKVP--------FDQIGNNLNSALKNADQ 474
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L ++++ + A+ + + T + +D+
Sbjct: 475 LFTRLDK--------EVVPQARDTLAAAKQTFGSAEATLQQ--------DSPLQSDVHQA 518
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+++L T+ + + ER+P+ ++ G+
Sbjct: 519 LQELTRTLQSLNALSDYLERHPESLLRGKSGDK 551
>gi|167837814|ref|ZP_02464697.1| paraquat-inducible protein B [Burkholderia thailandensis MSMB43]
Length = 527
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/408 (9%), Positives = 104/408 (25%), Gaps = 40/408 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + ++R S+ + S + + + VG++VG LD++ + + P
Sbjct: 153 DQKGTQYVLR-GDSLGSIDIGSPIYYRRVQVGQVVGFSLDKDGTG---VTFRVFVNAP-- 206
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA--E 152
Y + L + + T S + +
Sbjct: 207 ----------------YDQYVGLNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIAFQ 250
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ + + V+ N + + V
Sbjct: 251 SPPNQAAGPPAPNNMTFRLGADEGDAMREPDGEPVQVVMNFNQSLRGLSVGATVDFRGIV 310
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
N D + + L ++ + + V+ +
Sbjct: 311 LGQVTNIGIDFDPKTKTFTMPVTMNVYPDRLGRKFREASQDKGYAARREMLSRLVQHGLR 370
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
G + L + + + ++
Sbjct: 371 GQLRTGNLLTSQLYVALDFFPKAPPAKVDLDHEPVELPTVPNTLDELQLQVADIAKKLDK 430
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ I +NLN + +L +++ + +A+ + + T +
Sbjct: 431 VPFDQIGANLNSALANADKLFKRLD--------TEVAPEARDTLSAAKQTFTTAEATLQQ 482
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 483 --------DSPLQSDVRGALKELTRTLQSLNALADYLERHPESLLKGK 522
>gi|118619132|ref|YP_907464.1| MCE-family protein Mce3F_1 [Mycobacterium ulcerans Agy99]
gi|183984027|ref|YP_001852318.1| MCE-family protein Mce3F_1 [Mycobacterium marinum M]
gi|118571242|gb|ABL05993.1| MCE-family protein Mce3F_1 [Mycobacterium ulcerans Agy99]
gi|183177353|gb|ACC42463.1| MCE-family protein Mce3F_1 [Mycobacterium marinum M]
Length = 485
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 6/136 (4%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + + +F + ++ ++ V + +P GL S+V
Sbjct: 1 MRLTRQIFIQMAIFAIVATTALLIMVFGYMRVPAMVGIGQYRVTVELPE-AGGLYPRSNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VG + + L A + D + A + + G Y++L
Sbjct: 60 TYRGVEVGTVKSVHLTNTG---VAAVLSLNSDVKIPADVEAEVHSVSSVGEQYVQLLPRS 116
Query: 119 KEKKTIFQIATERNQR 134
+ ++ + R
Sbjct: 117 GQGPSLKDGDVIPSSR 132
>gi|329121162|ref|ZP_08249791.1| hypothetical protein HMPREF9083_0252 [Dialister micraerophilus DSM
19965]
gi|327470325|gb|EGF15784.1| hypothetical protein HMPREF9083_0252 [Dialister micraerophilus DSM
19965]
Length = 301
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/230 (10%), Positives = 74/230 (32%), Gaps = 4/230 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VG+F + + I LS S + + +GL + +
Sbjct: 1 MKKWSAEAKVGIFTLLGIILFAVLIVQLSHSVLFGKSGFYITGYFNE-AEGLKAGDKIHY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + ++ ++ + + +I T + G ++++
Sbjct: 60 AGVDVGVVEKISVE---KGKAVLHIKLYNGVEIPEDADFSIETNSVMGSRFVKVFGGHAG 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + + + T + ++ K+ ++ +
Sbjct: 117 KGYLSDGMIVVGKATPGIDATIQKMDKLIDTTQTMVEGINTIVADTKVQNEVKNSIGNIE 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + T+ + ++ + T+ + D N +T + ++
Sbjct: 177 SVSKNLHTLTLQGMQIANQAQNVTEKMDNMLDELNGDGKLTKDVRNVMNN 226
>gi|145225111|ref|YP_001135789.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145217597|gb|ABP47001.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 504
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 23/152 (15%), Positives = 55/152 (36%), Gaps = 5/152 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + +F ++ + ++ +L V +++P + GL S+V
Sbjct: 1 MLTRFVRTQLIIFSIAAVVGLGSMVFVYLQAPVMLGIGRMTVTLKLP-NTGGLYEFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI VG++ G+ + ++ + A +R+ G Y++L
Sbjct: 60 YRGIEVGKVTGIEPTGDG---VTVTMSLKSSPKIPTDLKAHVRSVSAVGEQYVDLEPRSD 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + R+ I + +S
Sbjct: 117 AGPYLQDGSVITGDRSSIPQAVGPMLDQMSAL 148
>gi|120401939|ref|YP_951768.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954757|gb|ABM11762.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 438
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/297 (13%), Positives = 85/297 (28%), Gaps = 8/297 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +VG + DG GL D+ V+
Sbjct: 4 MTER-NPLAVGAVGAVTVGAVLLGALNFDDLPFADGAADY--SAYFADAAGLQPDAPVQV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD L + + L T A I+T+ + G Y+E+
Sbjct: 61 AGLRVGQVTDISLDGP---RVLVEFDVDKGVRLGDRTEAAIKTKTVLGAKYVEVIPRGAG 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAE--NTSKKISDSSRHIQKIIENIEKPLTT 178
++ +T + I+ + S + + + +
Sbjct: 118 GQSGPIPLERTTSPYQLTDVLGDLASTINGLDTAELSTSLDTLADTFSDTPPELRIAVQG 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+TI+ S + + + V SD T+ + S + + Q
Sbjct: 178 VSRFADTINQRDEQLRSLLSNVSKVSGVLAERSDQIVRLVADTNALLSQLRQQSSSLDQI 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
I + ++ Q + + + +K+ ++ + S
Sbjct: 238 SGNISAVSRQIKGFITENRPQFKPALDKLNGVLTIVERRKEKLQESITRLNGYSMSL 294
>gi|257054983|ref|YP_003132815.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584855|gb|ACU95988.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 394
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/353 (11%), Positives = 97/353 (27%), Gaps = 9/353 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ T V FVV L + F + + G + GL S V +
Sbjct: 1 MLTRRIKTQVIAFVVVALAATTFVGASYAGLGRLLGRDGLSVHLQLADGGGLFPGSEVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG + L L + L + D P + + A + + G Y++L +
Sbjct: 61 LGVAVGEVDRLHLTDDGMEAVLV---LDEDAPAIPADSHAVVANRSAVGEQYVDLRSPTG 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + R + + + + S + ++ +++ + T
Sbjct: 118 RAPYLEDGSVIRRESTTLPLP-----VHTLLSNLNAFTESVPTESLRTVVDELYTAFQGT 172
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+++ + + + T + + + +++
Sbjct: 173 GDDLQVLLDSSREFTHTATEYLPQTTTLIEDGATVLRTQAESAEAWRSFADNTKLFAREL 232
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+++ ++ Q+ + D L SD ++
Sbjct: 233 AGADGDLRELIARTPGAATQLSGLLSDTDPGLSVLIANLVTTSRLFSDRVDGLEHLFVML 292
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
A S + S D + T + +D+
Sbjct: 293 PKATAATSAALDGDQFSVALTFFDPPPCLRGYEGTPRRAGEDGSDAPFNTDAA 345
>gi|289165422|ref|YP_003455560.1| Mammalian cell entry related domain protein [Legionella longbeachae
NSW150]
gi|288858595|emb|CBJ12476.1| Mammalian cell entry related domain protein [Legionella longbeachae
NSW150]
Length = 300
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 55/291 (18%), Positives = 108/291 (37%), Gaps = 5/291 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K YT VG+ V+ +L ++ WLS + + + GL+ D+ V++
Sbjct: 1 MEAKTNYTIVGVVVLILLVGLITTMLWLS-IGFNQKKYTTYTVYMHEAASGLTQDAPVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + + L+Q P I TP+ ST AT+ +QG+ G++YI LS
Sbjct: 60 NGVQVGYVKEIRLNQNDPRQVEILLDIEEGTPVTTSTFATLNSQGITGVSYIGLSASTSN 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I ++ E +I + PS N S + S+ + + Q+I
Sbjct: 120 LTPITKMPGEP--YPVIPSKPSVFNQLDSILKKVSEDMGIVTTEAQRIFNEENAKH--IK 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I + + + + + +S + S ++ + N
Sbjct: 176 HILSNIDSFSKDIADNGKNVNVFMENLAKTSRDFPHVIEELKVGISKFNLMAESLSKAGN 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + N K S + + + +K+ + +
Sbjct: 236 SVSKTMNSGKNTLDKISQESLPPATILLRRLNAISANLEKVSSEMRQNPAV 286
Score = 41.5 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 50/142 (35%), Gaps = 5/142 (3%)
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA----- 361
+ ++ + + + I ++ I++ + ++ D+ + M + S
Sbjct: 153 EDMGIVTTEAQRIFNEENAKHIKHILSNIDSFSKDIADNGKNVNVFMENLAKTSRDFPHV 212
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNH 421
++E + +++ + S N L SQ L L+R+L +
Sbjct: 213 IEELKVGISKFNLMAESLSKAGNSVSKTMNSGKNTLDKISQESLPPATILLRRLNAISAN 272
Query: 422 FDDCLNNFERNPQDIVWGREKG 443
+ + +NP ++ G +
Sbjct: 273 LEKVSSEMRQNPAVVIRGSKPP 294
>gi|330815579|ref|YP_004359284.1| Paraquat-inducible protein B [Burkholderia gladioli BSR3]
gi|327367972|gb|AEA59328.1| Paraquat-inducible protein B [Burkholderia gladioli BSR3]
Length = 544
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 40/406 (9%), Positives = 112/406 (27%), Gaps = 35/406 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+ S+ + S V + + VG++VG LD++ + + P
Sbjct: 169 GDDKGTSYVLHGDSLGSVDIGSPVYYRRVQVGQVVGFSLDKDGTG---VTFNVFVNAPYD 225
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
R +G+ S+ K S + A
Sbjct: 226 QYVGTNTRWWQASGVDLRLDSSGFKLNTQSLATVILGGLAFQSPPNQSAGGPVSNGATFR 285
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
S + + P+ + +++ + ++
Sbjct: 286 L-----GSDEGDAMRDPDGLPVEVVMNFNQSLRGLSVGAPVDFRGIVLGNVTNIAIDYDP 340
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
T N + + ++ + + + + + T
Sbjct: 341 KTKNFLMPVTMNIYPERLGKRFRDLVEKKGEPAQRDILTRLVEHGLRGQLRTGNLLT--- 397
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
L K+++ L + +++ ++ K + +
Sbjct: 398 -------SQLYVALDFFPKAQKVQIDLTRKPVELPTVPNTLDELQLQVADIAKKLDKVP- 449
Query: 335 IENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
+ I +NLND+ + +L +++ + A+ + + T +
Sbjct: 450 FDQIGNNLNDALKHADQLFQQLD--------TQVAPQARDTLSAAKQTFTTAEATLQQ-- 499
Query: 395 NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ +++L T+ ++ + ER+P+ ++ G+
Sbjct: 500 ------DSPLQADVRGALKELTRTLQSLNNLADYMERHPESLLRGK 539
>gi|118463822|ref|YP_879399.1| virulence factor Mce [Mycobacterium avium 104]
gi|118165109|gb|ABK66006.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 357
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GL + + + + + + GP V GL VR G+ VGR+
Sbjct: 5 LIGLSLFMAIAIAVTWMVYATLRRDVAGPTTPYAAMFTD-VYGLRVGDDVRMAGVRVGRV 63
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ L + ++ D LY +T A++ Q + G Y+ LS
Sbjct: 64 EKVELAG---KLAKVSFIVENDQRLYGNTVASVTYQNIIGQRYLGLSLG 109
>gi|126436260|ref|YP_001071951.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236060|gb|ABN99460.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 341
Score = 84.6 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/299 (12%), Positives = 89/299 (29%), Gaps = 9/299 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+++ T + + ++ + +L S+ G + L SVR G
Sbjct: 2 TRSTGTLIKFIIFGVIMVVLTAFLFLVFSDSRTGATEKYSAVF-EDASRLKAGESVRIAG 60
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I VG + + L + + + +T L ST A IR L G Y+EL +
Sbjct: 61 IRVGTVKNVSLRAD--RKVVVEFDTDKNTKLTTSTKAAIRYLNLVGDRYVELIDSPGSTR 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPL 176
+ + R + + E+ + + + +Q +E
Sbjct: 119 ILPAGSEIPLARTAPALDLDVLLGGLKPVIRGLNPEDVNGLTTSLVQILQGQGGTLESLF 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ + + +++ ID++ + + D + +
Sbjct: 179 SKSSSFTNSLADNNQVIEQLIDELRTVLDTLSKDGEEFSGAIDRLDQLIEGLAADRDPIG 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ ++ + NT+ + ++D L +
Sbjct: 239 TAIEALDNGTSSLADLLGRARPPLNNTIDQLNRLAPLLNTDLPRLDATLQRLPEIYRKL 297
>gi|332038536|gb|EGI74979.1| uncharacterized ABC transporter, periplasmic component YrbD
[Pseudoalteromonas haloplanktis ANT/505]
Length = 182
Score = 84.2 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 5/119 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ VG FV + ++ S G + + ++ L + V+
Sbjct: 1 MNSRKLEILVGFFVALGILAFAMLALKVANSGISGSGETYTLNAKF-ENIGSLKARAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELST 116
G+ +GR+ +++ + I +++ +I T G+ G Y+ +
Sbjct: 60 VGGVVIGRVESIYVHPQEFLPV-VNMTIDAQYLCRFSDTSSISILTSGILGEQYLGIHP 117
>gi|254821572|ref|ZP_05226573.1| Mce1B [Mycobacterium intracellulare ATCC 13950]
Length = 359
Score = 84.2 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 45/117 (38%), Gaps = 6/117 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +GL + + + + + + GP V GL VR
Sbjct: 1 MKVRGP--LIGLSLFMAIAIAVTWMVYATLRRDVAGPTTPYAAMFTD-VYGLRIGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + L + ++ D LY +T A++ Q + G Y+ LS
Sbjct: 58 AGVRVGRVENIELAG---KLAKVSFIVENDQHLYGNTVASVTYQNIIGQRYLGLSLG 111
>gi|240170714|ref|ZP_04749373.1| virulence factor Mce family protein [Mycobacterium kansasii ATCC
12478]
Length = 342
Score = 84.2 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 41/123 (33%), Gaps = 5/123 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ +F+V + + G +V GL + + VR G+ VG++
Sbjct: 11 RLAIFMVVCTLGLIAMLAIFADLR--FGDEKPYRAHFS-NVSGLESGNFVRIAGVEVGQV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + ++ + L T A IR Q L G Y+ L + +
Sbjct: 68 KRISI--RDDGTAMVEFGTDNSVVLTEGTKAVIRYQNLIGGRYLALEEGSGGSRQLRPGD 125
Query: 129 TER 131
T
Sbjct: 126 TIP 128
>gi|149916368|ref|ZP_01904888.1| hypothetical protein RAZWK3B_12277 [Roseobacter sp. AzwK-3b]
gi|149809822|gb|EDM69674.1| hypothetical protein RAZWK3B_12277 [Roseobacter sp. AzwK-3b]
Length = 152
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 42/121 (34%), Gaps = 3/121 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG V+++ ++ + + S DG+ + VR
Sbjct: 1 MSESTTEVIVGGAVLAVAVGFLVYAGQVTGVSGAATE-YPLSASF-RSADGVDVGTDVRM 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD E + + + + I ++GL G ++E+
Sbjct: 59 AGVKVGRVTAVELDPETYR-AKTTFTVTEGIAVPDDSAVAISSEGLLGGNFVEILPGGSP 117
Query: 121 K 121
Sbjct: 118 F 118
>gi|320007319|gb|ADW02169.1| virulence factor Mce family protein [Streptomyces flavogriseus ATCC
33331]
Length = 343
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 1 MESKNYYT-SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ ++ V V ++ ++ LS ++ G R GL SVR
Sbjct: 1 MKRRSLAGPLVKSLVFVVVTALATTVLALSIADTGIGDTTSYKARFTD-ATGLVVGDSVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG++ + + + +R L S TA+I+ + G YI+L
Sbjct: 60 IAGVKVGQVESIEVA--DRREAEVGFAVRKGRRLPASVTASIKYLNMVGQRYIDLDQG 115
>gi|240173396|ref|ZP_04752054.1| MCE-family protein Mce3D_1 [Mycobacterium kansasii ATCC 12478]
Length = 460
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/355 (10%), Positives = 96/355 (27%), Gaps = 15/355 (4%)
Query: 1 MESKN---YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M ++ +G+ + +L F + + V+ S +G+
Sbjct: 27 MMNRAVNRRNARIGVAAMLVLTFIAGVVVVWQGAA--ATRKTTVVAYFKNS-NGIFVGDE 83
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
VR G+PVG+I + E + A I + L I+L+
Sbjct: 84 VRILGVPVGKIDKIEPQPE---RVKITFSYDAKYQVPADAKAVILSPSLVTARVIQLTPA 140
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD-----SSRHIQKIIENI 172
+ A +R + + ++ + + +N+
Sbjct: 141 YTGGPQLPDHAVIPPERTAVPVEWDDLRQDLAKLTQMLQPSQPGGVSAMGALLNTAADNL 200
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
T I +S ++ H + + T + + + + + +
Sbjct: 201 RGQGPTIRDTIVKLSQAVSALGDHSNDIFSTVKNLSILVSALQSSTDLMRQLNQNLATVT 260
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-SSK 291
+ +++ + ++ V + ET+ V ++ L D +
Sbjct: 261 GLLTNDPDEVASAVAGLADIVGDVRGFVAENRETLGETSDKLASVSTALNDSLDDIKQAL 320
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ NI S A+ + + I + +
Sbjct: 321 HIAPTELQNFMNIYQPAQGTLSGAPALNNFANPIAFLCGAIQAASRLGYEQSAKL 375
>gi|320007318|gb|ADW02168.1| virulence factor Mce family protein [Streptomyces flavogriseus ATCC
33331]
Length = 338
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/307 (12%), Positives = 89/307 (28%), Gaps = 17/307 (5%)
Query: 1 MESK----NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M K ++G+ + +L + + + + G S GL
Sbjct: 1 MRIKPVRERNPVALGVIGLVVLA-LVGLAAYRADALPFIGRGTTYSADFTESA-GLDAGD 58
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
VR G+ VG + G+ LD ++ D + S+T I + L G Y+ +
Sbjct: 59 EVRIAGVKVGEVTGVSLDG---AKVKVDFKVK-DAWIGDSSTVGIAVKTLLGEKYLAV-- 112
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + R + T S + + + + + E I
Sbjct: 113 -----DPLGDAPQDPDSRIASSRTTSPYDVTQAFDGLGETIDEIDTAQLAQSFETISDTF 167
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ ++ + + L+ + + S + L
Sbjct: 168 KDSPPDVRSAAEGLSALSRTVSERDAQLATLLRGSRQLTKTLATKKSSFETLLEDGNLLL 227
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
++ ++I + Q+ V D + + + ++ +L +
Sbjct: 228 GEIQARRDSIHLLLTGTRDLGTQLTGLVTDNDKQLKPTLDSLGRVTTVLVKNRKSLDKVL 287
Query: 297 TSAFLEN 303
+ A N
Sbjct: 288 SMAGTYN 294
>gi|298490316|ref|YP_003720493.1| mammalian cell entry related domain-containing protein ['Nostoc
azollae' 0708]
gi|298232234|gb|ADI63370.1| Mammalian cell entry related domain protein ['Nostoc azollae' 0708]
Length = 470
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/437 (11%), Positives = 124/437 (28%), Gaps = 40/437 (9%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ WL+R + ++ + G+ S VR+ G+ VG I +
Sbjct: 29 AFGIILLWLNRI-PLGRSSYKAVVEF-ANAGGMQKGSPVRYRGVKVGSISNIKTAVN--- 83
Query: 80 HSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ I P+ + + GL + I+++ +
Sbjct: 84 AVAVEIEINDPNLIIPADSKIQASQTGLISESIIDITP----ITNLATGTNIAKPLDKDC 139
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
I IS + + + T NN
Sbjct: 140 NPSLIICNEISTLKGQIGISV------------------DELIRQSSDFTAQYNNKEFYQ 181
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ + ++ S + ++ K I + + K+++
Sbjct: 182 NVNRLLVTSASAASSVANLSRELQSVSKSFKGQIGTFSNTAVTIQKATNELTTTTSKTAN 241
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
Q+ T + +T Q + +D LL+ S L NI +++ +R ++S +
Sbjct: 242 QLGETASEFSKTAQQAGSLLNNLDELLTTNRSS-----LVRTLNNITQTSNQLRQTVSGL 296
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
++ + N + ++S + +NN + A+
Sbjct: 297 SPAVNRLNEGGLLNNLELLSANA-AEASTNLKDASKTLNNPKNIVLLQQTLDAARVTFEN 355
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN----NFERNPQ 434
+ + ++ + +N + LV Q+ + N
Sbjct: 356 TQKITSDLDELTGD--PQFRQNLLQLVNGLSKLVSSTQDMQEQAKVAVTLDSLKASMNQA 413
Query: 435 DIVWGREKGSVKIYKPK 451
+++ V++ KP+
Sbjct: 414 ELLTSIPVKKVEVEKPE 430
>gi|261416605|ref|YP_003250288.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373061|gb|ACX75806.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302326064|gb|ADL25265.1| Mce-like protein [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 307
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 86/294 (29%), Gaps = 7/294 (2%)
Query: 1 MES-KNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
ME+ ++ +G F++ + F Y L R V+GL D+ V
Sbjct: 1 METTRSERIKLGAFMLFCGVLICVFLGYVLKRY--LSEQFDNYYTIFDTDVNGLFVDAKV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ-GLAGITYIELSTL 117
+ NGI VG + + ++++ N + + TP+ T A + L G + LS
Sbjct: 59 KLNGISVGSVTSITINEQDLNQVVVAFKVTQGTPIKIGTRAGLTAGMNLTGEKQVILSGG 118
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ--KIIENIEKP 175
+ + + +M + + I ++
Sbjct: 119 SFNEPNVPEGGLVPAAASMFDQITGQMGDLFGKVNPIVDGLVRVLNPENAESISRTLQNL 178
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
TT + + + ++ ++K T +L +K+
Sbjct: 179 EKTTANLSYITANLGKPLNNMSKSAASLQKILAEIEEAKLAAKTEQNLTVLKEKLEAIDT 238
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+++ + + + V V + + ++
Sbjct: 239 KGLNENLMQTAESMNKLAQRVDAIVYKNEDQVGNAMDELNTILENLEEFSQKIK 292
>gi|218960475|ref|YP_001740250.1| hypothetical protein CLOAM0133 [Candidatus Cloacamonas
acidaminovorans]
gi|167729132|emb|CAO80043.1| hypothetical protein CLOAM0133 [Candidatus Cloacamonas
acidaminovorans]
Length = 300
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 94/290 (32%), Gaps = 6/290 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ G++ + I FS +WLS E+ I P +V GL V + G+
Sbjct: 9 RSVQIKTGIWTIVICLILVFSYFWLSG-RLAVRSHYELKIAFP-NVMGLEVGDKVMYRGM 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VGR+ + ++ + A IR D L T + L G + + +
Sbjct: 67 EVGRVKSITASKD---KVITTANIRSDIILTEGTRFLVSDSSLMGGKALNIIPGDGKNPL 123
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + + S + + T K ++ + +Q + ++ T+ +
Sbjct: 124 NIKKLQQGTSPEGMMELISKASAGLDELNETVKLLNSPNGLLQSSRKLVQNA-DGTVTEM 182
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
++ + + + + ++N L+ + K +IL
Sbjct: 183 GNLAKEIKQELVITVNKIEDLTSSLQEVIAENKEPLKNTLVEGNITIEKLSATLDSLKIL 242
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
S + + + + ++ + ++ L+ D K
Sbjct: 243 SANLNRSAKALTENAGTAGLLLNDKQLYEKITNATDNLNALIKDIKENPK 292
>gi|118473503|ref|YP_889049.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118174790|gb|ABK75686.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 341
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 82/289 (28%), Gaps = 13/289 (4%)
Query: 3 SKNYYTSV--GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
+ T V G+F V + + F S G A L + SVR
Sbjct: 2 RRASSTLVKFGVFAVVMAVLTAFLFMTFSEYR--GGSYAGYSAVF-DDASRLESGDSVRV 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + L + L + L T A +R L G Y+EL
Sbjct: 59 AGVRVGTVKNVSLQPD--RTVLVDFDTERNIALTTGTKAAVRYLNLVGDRYLELIDSPGS 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEK 174
+ + + +R + + ++ + S + Q + +
Sbjct: 117 TRLLPAGSQIPKERTASALDLDLLLGGLKPVIQGLDPQDVNALTSSLIQIFQGQGDTLSS 176
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
++ T + T++ I+ + + + + S +
Sbjct: 177 LMSKTSSFSNTLADNDQVIGQLIENLDTVVDTLNRDGGKFSATVDRLEQLISGLSQDRDP 236
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
V Q+ + ++ + TV + + +D
Sbjct: 237 IGTAVTQLDNGTASIATLLTQARPPLDATVDQLNRMAPLLDDHKVVLDR 285
>gi|326382584|ref|ZP_08204275.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198703|gb|EGD55886.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 344
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 33/275 (12%), Positives = 75/275 (27%), Gaps = 9/275 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G F + + F + S + GL+ VR G+ VGR+
Sbjct: 12 LIG-FTLFAIVALFMTYLIWSTLERSVSGPTTGFTTTFNDASGLADGDDVRMAGVRVGRV 70
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ L+ ++ ++ D +Y +T A IR Q L G Y+ LS A
Sbjct: 71 QSIDLE---DGKAVVSFEVQDDQQVYANTRAAIRYQNLIGQRYLALSLDGP-----TPGA 122
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
A+ + A + + + + E++ + ++
Sbjct: 123 PLSGGSALHLPGEDSFDVTKLLAGFQPVFDTLTPEQVNSLSESLIQAFQGDEVSLTRTIA 182
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ + + + ++ +N +
Sbjct: 183 EIGQVANDMADRDQVLGAIITNMGVVMRELASQGDQVKTILDSAGKLVEGLNGSSQQFGK 242
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + ++S R T ++
Sbjct: 243 AIDQIGRTSTGFAQVFAQNRATLKSAGTAADDATT 277
>gi|89890702|ref|ZP_01202211.1| mce (mammalian cell entry) family protein [Flavobacteria bacterium
BBFL7]
gi|89516847|gb|EAS19505.1| mce (mammalian cell entry) family protein [Flavobacteria bacterium
BBFL7]
Length = 317
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VG+ V + F +L SN + + +V+GL+ + V NG+
Sbjct: 4 SKEVKVGILTVVAIALFIFGYSYLKGSNLLEDNRIYYAVY--DNVEGLTKSAPVTINGLR 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VG I + + + K + D +TA++ + L G
Sbjct: 62 VGNIDDIKFL-DDSGRLIVKFHVNGDFSFSSESTASVYSTSLIGGK 106
>gi|144898322|emb|CAM75186.1| mce family protein [Magnetospirillum gryphiswaldense MSR-1]
Length = 316
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 101/301 (33%), Gaps = 7/301 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ Y VG FV+++L S+ L+ + + +V G+ S V + G
Sbjct: 5 RTNYIVVGAFVLAMLAALIVSVALLTGKTGSNDLYTTQL----PNVTGIKYGSKVTYEGF 60
Query: 64 PVGRIVGLF-LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG++ G+ L ++ ++ + + A I G+ +++ +K
Sbjct: 61 VVGQVEGIEGLQKDNRTWFRVTMGVQEGWAIPEGSLARITAPGILAAPTLDIKGGASDKL 120
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENT--SKKISDSSRHIQKIIENIEKPLTTTI 180
A I AT + + +S + ++ + ++ + ++K +
Sbjct: 121 LPPGSDIPGGAAANIFATMNAMAGEVSKLTDQGLLPLMATVNTQVEALGLIMQKQAPELM 180
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
AN+ T+S LA I + T + + + + A ++
Sbjct: 181 ANLVTLSNDLAVKAPRITSDVQKITGTLSTQVINDKNADAITQSLANTADLTAGLVETRK 240
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++ + N + + + H ++ + + ++ + + +
Sbjct: 241 KLDNVVATIDGNKGQIDQSMKDLRHTLQALARNIDSIAYNLEGTSRNVHEFSRQIRDNPG 300
Query: 301 L 301
+
Sbjct: 301 V 301
>gi|89068965|ref|ZP_01156347.1| hypothetical protein OG2516_01786 [Oceanicola granulosus HTCC2516]
gi|89045546|gb|EAR51610.1| hypothetical protein OG2516_01786 [Oceanicola granulosus HTCC2516]
Length = 148
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 47/122 (38%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG V+++ + + + G E++ S +G+ + VR
Sbjct: 1 MRENPTEVVVGGAVLALAVGFLVFMLQGTGVSA-RGAGYELVANFS-SAEGVDVGTDVRM 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + L L+ E + ++ + ++ + ++GL G ++E+
Sbjct: 59 AGVKVGTVSALELNPETYR-ADMTISVQDGLLVPDDSSLAVASEGLLGGNFMEIVPGGSF 117
Query: 121 KK 122
+
Sbjct: 118 EF 119
>gi|301306739|ref|ZP_07212793.1| Mce family protein [Escherichia coli MS 124-1]
gi|300838018|gb|EFK65778.1| Mce family protein [Escherichia coli MS 124-1]
Length = 186
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 55/145 (37%), Gaps = 2/145 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++K VG+F+++ L + F + + ++ GL S V
Sbjct: 5 KTKKNEIWVGIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIG 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ ++
Sbjct: 65 GVVVGRVADITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFED 123
Query: 121 KKTIFQIATERNQRAMITATPSGIN 145
+ I + + + +
Sbjct: 124 PELGTAILKDGDTIQDTKSAMVLED 148
>gi|226365585|ref|YP_002783368.1| Mce family protein [Rhodococcus opacus B4]
gi|226244075|dbj|BAH54423.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 339
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/324 (13%), Positives = 94/324 (29%), Gaps = 12/324 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +N + +F V + + + L +GP G++ S V
Sbjct: 1 MSVRNSAIKLAVFAVFGILSAVLVVNTLRV--PVEGPTVGYKALFTD-AQGVTPGSDVTI 57
Query: 61 NGIPVGRIVGLFL-DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + + D + +L ++ D L TT IR L GI Y++L+
Sbjct: 58 AGVRVGRVASVDIVDGDAGSATALVNFEVQRDQALPADTTVAIRYGDLLGIRYLDLAAGP 117
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
E + + +P+ + N D + + E +
Sbjct: 118 SGDA---GTLAEGDTIPLDRTSPALDLTSLFNGFKPLFDAIDPKQVNELATEVVAVFD-- 172
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++ T+L + + Q+ + Q
Sbjct: 173 --GRKTSMETLLRRVADVTGNLANHDQLIGDLITHLEVVVGTAAARGPELSHLVDSLTQF 230
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ EN +V + +S+ + + V +++ L +
Sbjct: 231 TGMLAENNEVLMDTLDQSAAVSRSALQIVDGRVPELGRTVNRLESLTGAMVGADPEFDHL 290
Query: 299 AFLENIADSTSNMRSSISAIREIT 322
S+ + S + I
Sbjct: 291 MVAMPQFFSSVDRSGSYGSWLNIY 314
>gi|242277491|ref|YP_002989620.1| mammalian cell entry related domain protein [Desulfovibrio
salexigens DSM 2638]
gi|242120385|gb|ACS78081.1| Mammalian cell entry related domain protein [Desulfovibrio
salexigens DSM 2638]
Length = 320
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/278 (13%), Positives = 77/278 (27%), Gaps = 7/278 (2%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
L I +L + ++ I +V L+ V++ G+ VG++ + +D E
Sbjct: 22 GLTVLGLFIVFLGG-HDIFSDYSQYKILF-RNVKDLTPGRPVKYAGLSVGKVDSINVDAE 79
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
P + D PLY TTA + +GL G YI L + + + M
Sbjct: 80 NPGRISVIINVDHDFPLYRGTTAMVTQKGLVGDNYILLELRGDAGPKLSDGDSIPSAVIM 139
Query: 137 ITATPSGINYF-----ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ E + + + V
Sbjct: 140 SMNEVAAQMGRSVADLTPQLERAVNAFEMLFSSENMSNIGKSLKMAPEVLAETNATLVTF 199
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
N + S + N + D + ++ I + + +
Sbjct: 200 RNEWKRLAGAGAGAMDNGSKNITVLTNELIDTLQKVETAIATLQKDMSFTLGGVGADVTR 259
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ +V + + + I+ L + +
Sbjct: 260 AVDGIEGLTADLRRNVEYDQEELEIILTNINRLSREMN 297
>gi|91781845|ref|YP_557051.1| putative paraquat-inducible protein [Burkholderia xenovorans LB400]
gi|91685799|gb|ABE28999.1| Putative paraquat-inducible protein [Burkholderia xenovorans LB400]
Length = 552
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/453 (9%), Positives = 115/453 (25%), Gaps = 52/453 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY-----------------DGPMAEVIIRIPGSVDG 51
VG VS L Y + + I S+
Sbjct: 134 RVGASGVSGLTTLLSGAYIGADAGHSPDTEKNFVGLETPPPITGDQKGHQFILHGDSLGS 193
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++VG LD++ + P R +G+
Sbjct: 194 IDIGSPIFYRRVQVGQVVGFSLDKDGTG---VTMQVFVSAPFDQYVGTNSRWWHASGVDL 250
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K S + + +
Sbjct: 251 RLDSSGFKLNTQSLATVIVGG--------LSFQSPPGQGVGAQAPNNMTFRLGSDEADAM 302
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E + ++ +I + T + + +
Sbjct: 303 REPDGVPLRVVMNFNQSLRGLSIGAPVDFRGIVLGQVTNIGIDYDPKTRSFTMPVTMNLY 362
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + +R ++ +D +
Sbjct: 363 PDRLGRRFRETAPAPGSLAGQTMLQQLVKHGLRGQLRTGNLITSQLYVAVDIFPKAPPAT 422
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L I ++ ++ ++ I + D + I +NLN + + +
Sbjct: 423 VDVASDPLELPTIPNTLDELQLQVADIAKKLDAVP--------FDQIGNNLNSALKNADQ 474
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L ++++ + A+ + + T + +D+
Sbjct: 475 LFTRLDK--------EVVPQARDTLAAAKQTFGSAEATLQQ--------DSPLQSDVHQA 518
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+++L T+ + + ER+P+ ++ G+
Sbjct: 519 LQELTRTLQSLNALSDYLERHPESLLRGKSGDK 551
>gi|326331735|ref|ZP_08198023.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950534|gb|EGD42586.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 365
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/354 (13%), Positives = 109/354 (30%), Gaps = 12/354 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T + +F V + + + G GLS VR GI VG
Sbjct: 13 TKLAIFTVISILVTGTLASIMGNVG--FGDRVPYRAEFTT-ASGLSEGDDVRVAGITVGE 69
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
++ + ++ H++ + PL ++ A +R L G Y+ L+ ++
Sbjct: 70 VLSVEIEGGD--HAMVTFRVDKTVPLTTASGAQVRYLNLVGDRYLALTQDAGQQPEADAT 127
Query: 128 ATERNQ-RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
Q AM TP+ + N + + + I +
Sbjct: 128 PLREGQAIAMANTTPALDLTELFNGFQPLFQALQPKDVNKLSLNLIRVLQGEGGTVASLL 187
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S + ++ V + S + NT N + L + + + + +
Sbjct: 188 SETAELTSALAERDQLIGDVITNLSKTLNTVNEHHTELAELIQQLSGW----MKDLARDK 243
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ ++ D + + +E +++ ++ + K LE + +
Sbjct: 244 EAIGDSISSIGDLTDELAGLLTDVRPFLKEDIKQLKRVVDILNKPGNQKLLDRTLERLPE 303
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ + S + +I L D+S + +++N++
Sbjct: 304 TLESQARIGSYGSWYNYYLCDLDFSIKLPS--LGELLDNSPAVKAIQKQLDNVA 355
>gi|311743968|ref|ZP_07717774.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311313098|gb|EFQ83009.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 335
Score = 84.2 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 100/307 (32%), Gaps = 9/307 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
V + I+ + + + + NQ G E S GL VR GI VGR
Sbjct: 5 IRVKFVLFGIVALAIMLVLYNTMVNQVAGDSTEYRADFT-SASGLQAGDDVRAAGIRVGR 63
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L + + ++ D L ++ T+R Q L G Y+ LS + + +
Sbjct: 64 VNRVELVE--GATARVTFVVGADQALTDTSRLTVRYQNLLGQRYLSLSPGEQPGEVLEAG 121
Query: 128 ATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
AT ++R + + E+ ++ +Q +E L T
Sbjct: 122 ATVPSERTDPGFDLTTLLNGFEPLFATLQPEDVNQLAGSIVAVMQGEGGTVESLLAETAE 181
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+++ +D++ + + + + + +
Sbjct: 182 LTSDLASKDEVFGQVLDRLTPVLENLTAQDQALAGTIDELKALMTGLAEDRQAIGGSLAG 241
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
I E +++ ++ ++T+ +R+ F ++ LL S+ +
Sbjct: 242 ISELSTATADLLAEARPDAVSTISSLRDVADLFVVNADQLRELLPAMSTATGAFARPMNS 301
Query: 302 ENIADST 308
++
Sbjct: 302 GTWLNTY 308
>gi|320103293|ref|YP_004178884.1| Mammalian cell entry related domain-containing protein [Isosphaera
pallida ATCC 43644]
gi|319750575|gb|ADV62335.1| Mammalian cell entry related domain protein [Isosphaera pallida
ATCC 43644]
Length = 372
Score = 83.8 bits (204), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/365 (10%), Positives = 97/365 (26%), Gaps = 10/365 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGLF ++ + + W + +I + G+ + V
Sbjct: 1 MSERMMQFWVGLFALAAVVLFCVLLSWFGDLPNHFKEK-RYVIATYRNAGGVGVGTPVYR 59
Query: 61 NGIPVGRIVGLFLDQEYPN-----HSLAKALIRPDTPLYPSTTATIRTQGLAGIT---YI 112
+GI VG ++ + D + L ++ L + +GL G ++
Sbjct: 60 SGIRVGEVLAIEFDSDQTADNPGDGVLVTIVLDDPRYLPRNNHRPQIGRGLLGDASIEFL 119
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ + + R P E SK +
Sbjct: 120 NDDLIEDQSLMPTSSSPFDAPRIAGRLRPDPAQAIEVATETISKAQETLETIRKAADGIA 179
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
A + + ++ T I L+ ++
Sbjct: 180 LLTGKLESAGEFVETWTQTGTKLGDIADEVKVLLDKNADQVGPTLANIRSASDRLNLLLD 239
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVH-DVRETTQTFQEVGQKIDHLLSDFSSK 291
+ KV ++L+ I ++ + ++ + +++ + SD
Sbjct: 240 EENRAKVQRVLDRIDEAARGLSELQPLLVELGDTTNAPPRTQLGQTAYRLNRIASDLGLL 299
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ T + + + + +S + I + + + K A
Sbjct: 300 TAALRTRDGRLDRTTTLAQLFTSSQTADNLNRMTLTITDLAANARIVLDKFSRFADKIAA 359
Query: 352 LMSKI 356
S +
Sbjct: 360 DPSAL 364
>gi|254823474|ref|ZP_05228475.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 346
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/291 (14%), Positives = 82/291 (28%), Gaps = 12/291 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ T + +F V +L F+ + ++ GL VR
Sbjct: 1 MKISGTITRLSIFSVVLLIFTVMIFVVFGQMRFDRTNGYSAE---FSNISGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ + L + + K + PLY STTA IR L G Y+E+ + E
Sbjct: 58 SGVEVGKVDKVELV-DGGKRARVKFNVDRSIPLYQSTTAQIRYLDLIGNRYLEIKRGQGE 116
Query: 121 --KKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENI 172
K + R + + + + Q I
Sbjct: 117 GADKVLPPGGFIPLSRTTPALDLDALIGGFKPLFRALDPQKVNTIATALVTVFQGQGGTI 176
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L T + I + T + +++ + K
Sbjct: 177 NDILDNTAQLTNQLGERDQAIGEVIKNLNIVLDTTVRHRQQFDQTVDKLEVLITGLKNHG 236
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
I ++ + + T++ + Q + ++
Sbjct: 237 DSQAAGFAHISNAAGTVADLLAEDRALLHKTINYLDAVQQPLIDQQDQLQD 287
>gi|319791001|ref|YP_004152641.1| mammalian cell entry related domain protein [Variovorax paradoxus
EPS]
gi|315593464|gb|ADU34530.1| Mammalian cell entry related domain protein [Variovorax paradoxus
EPS]
Length = 318
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/140 (21%), Positives = 60/140 (42%), Gaps = 3/140 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + + G FV+ +L + W +R N + +V GL + VR+
Sbjct: 1 MENKAHALAAGAFVLGLLAVLVGLVIWFTRDNTVRN---VYELSTRDAVSGLQPQAMVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG++ + D + + + + PL S+ AT+ QG+ G+ +I L +
Sbjct: 58 RGIAVGKVASIDFDPKVKGNVRVRITVDQRVPLTTSSFATLSYQGVTGLAFIALDDKGES 117
Query: 121 KKTIFQIATERNQRAMITAT 140
+ + + + + +
Sbjct: 118 QVALKPNDDDPPRIPLKPSM 137
Score = 44.2 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 17/167 (10%), Positives = 55/167 (32%), Gaps = 7/167 (4%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
++ + + +++ K N + + + +A + + +T+
Sbjct: 137 MLAQLQDRGEAIINQVEEVTKRANQLLSDPNQKRAADALENIAAASASANTLLKTLDNTV 196
Query: 333 NTIENIT-SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
T N L D+ + S ++ ++ +A E+++
Sbjct: 197 KTGLNPALEKLPDTLGTVKKAASDVSRVANNFNTTVGRLNAPDGP------VERLSDGTK 250
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ + +F+ + L + + V ++ NPQ +++
Sbjct: 251 ALAQAVDSFNAATLPRVNRVADDTSHAVRRLGRAADSINDNPQSLLF 297
>gi|284043090|ref|YP_003393430.1| virulence factor Mce family protein [Conexibacter woesei DSM 14684]
gi|283947311|gb|ADB50055.1| virulence factor Mce family protein [Conexibacter woesei DSM 14684]
Length = 509
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 47/402 (11%), Positives = 104/402 (25%), Gaps = 20/402 (4%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
F +S + S + P + L+ + VR +G+PVG++V L
Sbjct: 17 FALSCFGLLLYLWISFGGSVPLKPKGYQFHAYFPEAAQ-LAQQADVRISGVPVGKVVKLE 75
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + + + +P+ A +R + L G TY+EL+ K + +
Sbjct: 76 LGPDDTTDATIQLD-ERYSPIPRDARAILRQKTLLGETYVELTPGNKSAGLLREGG---- 130
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN-IEKPLTTTIANIETISTVLA 191
A P+ + + + + +R ++ + L + LA
Sbjct: 131 ------ALPASQVQRTVELDEIFRSLDERTRRDFQVWMQSSAEALRGRGQDFNDTLGNLA 184
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ ++++ I S + + N + I +
Sbjct: 185 PFATGTNELLTILNRQEPMVQGFFRNTGIVFDALSERGNDLSSLITNSNTVFGTIGDRNE 244
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + T + D L++ +
Sbjct: 245 ALQAFFKALPTFERESQLTVERLDRFAHNTDPLVTQLRPV-----ARQLSPTLQSLERLA 299
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ + +L + + N + S +
Sbjct: 300 PPFRDFFVDLGPLITASYRGLPAFSRFLDDLRPALGQLDPFTRTFNPVLRF--LASYLPE 357
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
F + P L FS GL +
Sbjct: 358 IDSLFGNFTAATNTQTIEGPGYLRGLAPFSPEGLTTYPKRLA 399
>gi|120401167|ref|YP_950996.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119953985|gb|ABM10990.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 520
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 26/284 (9%), Positives = 84/284 (29%), Gaps = 5/284 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + F + + +Y+L + ++ + S GL +V
Sbjct: 1 MLTRFIKFQLITFTILTVVALGVLGLYYLRLPSLAGIGEYKLYAELERS-GGLYPTGNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G +G++ + + + I + + +A + + G Y++L +
Sbjct: 60 YRGTQIGKVTEVEPTETG---ARVTMSIGDEYKIPADVSANVHSVSAIGEQYLDLVSETG 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + T P+ A +KI + + L
Sbjct: 117 TDQYLSAGQTITKSTVPAEVGPALDAANNGLAVLPKEKIDGLLTETSAAVGGLGPALQRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + ++ +N+ ++ ++ + S + ++ A +
Sbjct: 177 VDSTTNVAEGFRDNLPQVNDIITNSAPILQSQVTSGDAIEQWSRNLNVIASQTAEQDAAL 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
L+ + + V + + ++ ++ +
Sbjct: 237 RSGLQQAAPTLDQVTTVFSDVRDALPQTLANLAVINDMLKRYNK 280
>gi|41406667|ref|NP_959503.1| hypothetical protein MAP0569 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395016|gb|AAS02886.1| hypothetical protein MAP_0569 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 533
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ + ++++L + V GL +++V
Sbjct: 1 MHDRLTKIQLAIFAVITVITLTVMAVFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L +A+ + +T + + TAT+++ G Y
Sbjct: 60 YRGVAVGRVESVGLSPNG---VIAQMRLNSETAIPSNVTATVKSVSAVGEQY 108
>gi|189502047|ref|YP_001957764.1| hypothetical protein Aasi_0638 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497488|gb|ACE06035.1| hypothetical protein Aasi_0638 [Candidatus Amoebophilus asiaticus
5a2]
Length = 306
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/276 (14%), Positives = 79/276 (28%), Gaps = 2/276 (0%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VGL V + L + +L N + I GL+T S V NG+
Sbjct: 4 SKEVKVGLLVTTTLIVVYLGFNYLKGKNLFSNSKVYYAIY--NDTKGLNTASEVMLNGVS 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG+I + + E I + L +T + + L G IEL E
Sbjct: 62 VGKIRQINMLPEEGYKVRVTLEINENIKLTNTTIGKLVSSNLLGDKIIELHIKEGELLQC 121
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
++ T I++A + + +++ + + I T +
Sbjct: 122 HDTIISETEQDFQTMFAESTLPAINDARALTTLTTKFMQNLVENTDRINSIFTNLEKTSQ 181
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + +N + + S I +
Sbjct: 182 ELRHAVNSNKKDLSTISRNMSKISSSLSDPEIGIRPLLTRLKELTHEIEIIKLNELTLKL 241
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
N +S + T+ D+ F+ +
Sbjct: 242 NNILSKLEDGTFYGHIDQTIVDLDRLLIDFRNHPSR 277
>gi|315445478|ref|YP_004078357.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315263781|gb|ADU00523.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 504
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 51/151 (33%), Gaps = 3/151 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ + +F ++ ++ ++ G + + GL S+V +
Sbjct: 1 MLTRFVRIQLIVFTIASAVGLGAMVFVYLQAPVLLGIGRMTVALKLPNTGGLYEFSNVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG++ G+ + ++ + TA +R+ G Y++L
Sbjct: 61 RGIEVGKVTGIEPTSDG---VTVTMSLKSSPQIPADLTANVRSVSAVGEQYVDLQPRSDA 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + R+ I + +S
Sbjct: 118 GPYLQDGSVITGDRSSIPQAVGPMLDQMSAL 148
>gi|254819660|ref|ZP_05224661.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 351
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 64/179 (35%), Gaps = 9/179 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + ++ LF+V L + + ++S G A V GL VR
Sbjct: 1 MKFRGPLIALALFMVVSLTLT--WLVYVSLRRDVAGDTARYSAVFTD-VYGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + +++ + L+ +T A++ Q + G Y+ LS ++
Sbjct: 58 AGVRVGRVEKVELDG---KLAKVSFVVQQEQRLFGNTLASVTYQNIVGQRYLGLSLGKEG 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + PS + N + + I+ T
Sbjct: 115 SPELLA---PGSTIPVERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTKGIIQSLQGDT 170
>gi|254773618|ref|ZP_05215134.1| hypothetical protein MaviaA2_02935 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 574
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 49/112 (43%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ + ++++L + V GL +++V
Sbjct: 1 MHDRLTKIQLAIFAVITVITLTVMAVFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L +A+ + +T + + TAT+++ G Y
Sbjct: 60 YRGVAVGRVESVGLSPNG---VIAQMRLNSETAIPSNVTATVKSVSAVGEQY 108
>gi|301629825|ref|XP_002944034.1| PREDICTED: hypothetical protein LOC100485473 [Xenopus (Silurana)
tropicalis]
Length = 321
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/309 (12%), Positives = 95/309 (30%), Gaps = 11/309 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K + + G F++ + + + + + SV GL +SVR+
Sbjct: 1 MENKAHALAAGTFLIVV---TALLAGLALWLTRDNTRYTLYELSSKESVSGLQPQASVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG+++ + D + L + + D P+ P+T A + QG+ G+ ++ L
Sbjct: 58 KGVAVGKVMDIGFDPLVQGNVLIRIAVNADAPIRPTTFAVLGYQGVTGLAHVLLDDAG-- 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + P + AE ++ ++I +
Sbjct: 116 ----QPLPVPPVGPSGVPRLPLQASSLTKLAEQGLAVVAQMQAAAERINHLLGDKNQERF 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ A I+ + + + TT + D +L + + Q
Sbjct: 172 SLALDNIGGAAGQIAQLGQRLDTTVHQRLNPALAAVPGLAQDARATLQVLQQ--AGQSTA 229
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + + + R + + ++ S +
Sbjct: 230 AAADGLGQTMRRLYAPGGSLEQIEQSTRTLARAADKFSDATLPRVNRASDEAARAVRQFG 289
Query: 301 LENIADSTS 309
+ +
Sbjct: 290 RVADGMADN 298
Score = 41.1 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 18/129 (13%), Positives = 41/129 (31%), Gaps = 30/129 (23%)
Query: 340 SNLNDSSQKFAELMSKINNIS------ALKENNSLFKDAQRAMHTFRDT----------- 382
N+ ++ + A+L +++ AL L +DA+ + +
Sbjct: 176 DNIGGAAGQIAQLGQRLDTTVHQRLNPALAAVPGLAQDARATLQVLQQAGQSTAAAADGL 235
Query: 383 -------------SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
E+I + ++ FS + L + + V F +
Sbjct: 236 GQTMRRLYAPGGSLEQIEQSTRTLARAADKFSDATLPRVNRASDEAARAVRQFGRVADGM 295
Query: 430 ERNPQDIVW 438
NPQ +++
Sbjct: 296 ADNPQSLLY 304
>gi|163731529|ref|ZP_02138976.1| mce-related protein, putative [Roseobacter litoralis Och 149]
gi|161394983|gb|EDQ19305.1| mce-related protein, putative [Roseobacter litoralis Och 149]
Length = 148
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 47/135 (34%), Gaps = 7/135 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSV 58
M VG +L + + + + + Y + S++G++ S V
Sbjct: 1 MAEHTTEVLVGA---GVLAAAIGFVVYAGQISGYAGGSATYPLEASF-RSLEGVNVGSDV 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ +G + + L+ E + + + + + I ++GL G ++E+
Sbjct: 57 RLAGVKIGTVSEVTLNAETYR-ADTTVSLSSEIEIPDDSAIIISSEGLLGGNFVEIVPGG 115
Query: 119 KEKKTIFQIATERNQ 133
E Q
Sbjct: 116 SPYFYAAGDQIEDTQ 130
>gi|167645541|ref|YP_001683204.1| hypothetical protein Caul_1576 [Caulobacter sp. K31]
gi|167347971|gb|ABZ70706.1| Mammalian cell entry related domain protein [Caulobacter sp. K31]
Length = 172
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 45/127 (35%), Gaps = 3/127 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T +GL V+ + + G +V + G V L+ ++V G+ VG
Sbjct: 9 ETLMGLVVLVLAAGFLVYSLSVGGVGNKPG-GYDVTAKF-GQVGSLAPGAAVSVAGVKVG 66
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + LD + + + P L +TA I + L G ++ ++
Sbjct: 67 TVSRITLDPKTYLAVT-RLSLDPSVKLPSDSTAKITSDSLLGGVHVAIAPGGAADDIKPG 125
Query: 127 IATERNQ 133
+ Q
Sbjct: 126 GEIDNTQ 132
>gi|209520471|ref|ZP_03269231.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
gi|209499116|gb|EDZ99211.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
Length = 553
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 46/453 (10%), Positives = 118/453 (26%), Gaps = 52/453 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY-----------------DGPMAEVIIRIPGSVDG 51
VG VS L Y + + + S+
Sbjct: 135 RVGASGVSGLTTLLSGSYIGADAGRSTDSQSDFVGLETPPPITGDQKGHQYTLHGDSLGS 194
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++VG LD++ + P R +G+
Sbjct: 195 IDIGSPIFYRRVQVGQVVGFSLDKDGTG---VTMRVFVSAPFDQYVGTNTRWWHASGVDL 251
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K S + N + +
Sbjct: 252 RLDSSGFKLNTQSLATVIVGG--------LSFQSPLGQNMGVQAPNNQTFRLGSDEADAM 303
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E T + ++ +I + T + + +
Sbjct: 304 REPDGTPLRVVMNFNQSLRGLSIGAPVDFRGIVLGQVTNIGIDYDPKTQSFTMPVTMNLY 363
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + +R ++ +D +K
Sbjct: 364 PDRLGKRFRESAPQPGTLAGQNLMEELVKHGLRGQLRTGNLITSQLYVALDIFPKAAPAK 423
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L I ++ ++ ++ I + D+ + I NLN + + +
Sbjct: 424 VDVTRDPLELPTIPNTLDELQLQVADIAKKLDKVP--------FDQIGENLNAALKNADQ 475
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L ++++ + A+ + + T + +D+
Sbjct: 476 LFTRLDK--------EVVPQARDTLTAAKQTFSSAQATLQQ--------DSPMQSDVHQA 519
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+++L T+ + + ER+P+ ++ G+
Sbjct: 520 LQELTRTLQSLNALSDYLERHPEALLRGKSGDK 552
>gi|161523499|ref|YP_001578511.1| hypothetical protein Bmul_0319 [Burkholderia multivorans ATCC
17616]
gi|189351728|ref|YP_001947356.1| putative ABC transporter substrate-binding protein [Burkholderia
multivorans ATCC 17616]
gi|160340928|gb|ABX14014.1| Mammalian cell entry related domain protein [Burkholderia
multivorans ATCC 17616]
gi|189335750|dbj|BAG44820.1| putative ABC transport system substrate-binding protein
[Burkholderia multivorans ATCC 17616]
Length = 187
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 20 FSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP 78
F + + P V ++ ++ GL ++V+ G+ VGR+ + D
Sbjct: 20 ALLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVKSAGVVVGRVKSIGFDPNTY 78
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
++ + P ++A I T GL G YI L +
Sbjct: 79 -QAVVTVDLDSQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEM 121
>gi|92114340|ref|YP_574268.1| hypothetical protein Csal_2218 [Chromohalobacter salexigens DSM
3043]
gi|91797430|gb|ABE59569.1| Mammalian cell entry related protein [Chromohalobacter salexigens
DSM 3043]
Length = 154
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 56/136 (41%), Gaps = 4/136 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
SK VGLFV++ + F +S + ++ GL + S V
Sbjct: 3 RSKMMELGVGLFVLAGILGMVFLGLRVSGVGFGVPQDTFTLQANFANIGGLKSGSRVAMA 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD E+ + + + + +TA+I T GL G Y+ LS
Sbjct: 63 GVTVGRVSDVSLDTEWLD-ARVTMELDDSLEGKISRDSTASILTSGLLGEQYVGLSVG-G 120
Query: 120 EKKTIFQIATERNQRA 135
+ + + T R+ +
Sbjct: 121 DPEMLEDGDTIRDTQQ 136
>gi|296166530|ref|ZP_06848961.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898142|gb|EFG77717.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 478
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/283 (9%), Positives = 75/283 (26%), Gaps = 12/283 (4%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++++ +Y LS + I+ S GL VR G+PVG++ +
Sbjct: 16 AIALVAVLVGGVYVLSSTGNTRS-----IVGYFTSAVGLYPGDQVRVLGVPVGQVDTIEP 70
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ D + A I + L +I+L+ +
Sbjct: 71 RPSD---VRITMSVSKDVKIPKDAKAIIMSPNLVAARFIQLTPAYTGGAVLPDGGNIGLD 127
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R P + + + ++ ++ +Q + T+
Sbjct: 128 RT---GVPVEWDEVKESLTQLAVQLGPTTGSMQGPLGRAINQAADTLNGNGDSFHNALRE 184
Query: 194 ISHIDKMMHTTQ-VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+S + ++ + + + ++ + N
Sbjct: 185 LSQAAGRLGDSRSDIFGTVKNLQVLVNALSASNEQIVQFAGNVASVSQVLADSSRHLDNT 244
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + E T + ++ S + +
Sbjct: 245 LGTLNQALSDIRGFLHEHNSTIIDTVNNLNDFAKTLSDQSDNI 287
>gi|158520048|ref|YP_001527918.1| hypothetical protein Dole_0031 [Desulfococcus oleovorans Hxd3]
gi|158508874|gb|ABW65841.1| Mammalian cell entry related domain protein [Desulfococcus
oleovorans Hxd3]
Length = 305
Score = 83.8 bits (204), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 90/277 (32%), Gaps = 7/277 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VGLFV+SI+ F ++ + R + S + L ++ V+F +G++
Sbjct: 11 IVGLFVISIIVLLFSTVVLIGRGKNWFKSYVTYYTVFEESYN-LQENADVKFQKASIGKV 69
Query: 69 VGLFLDQEYPNHSLAKALI--RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ L ++ I + + TT T+++ G Y+ + + +
Sbjct: 70 SRIDLTED---KVRVTLKILEDYQSRITRDTTVTVKSPTFIGDEYVAVIPGNSRAPAMDE 126
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
++ A+ S + + S + + + T +E I
Sbjct: 127 GEEIQSIPKKSIEDLLVEFQVEQTAKKLSTAVKNISDITEALRDPEGPLFT-VFEELEAI 185
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ LA + M + + A +Q+V L N+
Sbjct: 186 LSNLAEATAKTPMAMDHVNTNLVTINKIGNELYFNLTDLRNMLADVAASMQRVKTALANV 245
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ +S + + + ++R ++ + Q +
Sbjct: 246 EEASYDIPAITHSTSLGIDEIRGAVESTDRIIQSLKE 282
>gi|118581615|ref|YP_902865.1| hypothetical protein Ppro_3214 [Pelobacter propionicus DSM 2379]
gi|118504325|gb|ABL00808.1| Mammalian cell entry related domain protein [Pelobacter propionicus
DSM 2379]
Length = 360
Score = 83.8 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/366 (11%), Positives = 105/366 (28%), Gaps = 25/366 (6%)
Query: 1 MESKNYYT-----SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
ME ++ G+F+ L F + + + + P ++ + + V GL
Sbjct: 1 ME-RSNRIGWAQVRAGVFIFLALLFIAGGVLLMGQKTKMFTPKGKLKVMM-EDVAGLKDG 58
Query: 56 SSVRFNGIPVGRIVGLFL-DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYI 112
+ V G+ VG + + D E N + + P + TI+T+GL G Y+
Sbjct: 59 APVWLAGVDVGVVTAVEFVDPERSNEVTIFIEAEHEALRKIGPDSRITIKTRGLMGEKYV 118
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
++ T + ++ +K + + I+++I
Sbjct: 119 ---------------DIIPSRFYSTTPPQILRGAPTAKLDDVVQKAGTTFDRVNTIVDSI 163
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ T + + T + + + +
Sbjct: 164 TQGKGTLGKLANDPALYSNIVKLTSELSELTITINRGQGTLGRLNRDPEPYNRLVSILNR 223
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
A + Q E + +++ + +E+ +K+ +
Sbjct: 224 ADQTLQDIQKSEGTLNKLIHDETLYAKLVLLADTSVQAAGDVRELNRKLTSPEGTIGMLV 283
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+E ++ + + +I I + + + + +N L
Sbjct: 284 SDRELYDRGLSLINRADSSIKTIEEITGRINNGSGTLGKTINEKELYERVNRMVDSVELL 343
Query: 353 MSKINN 358
+ I
Sbjct: 344 IKDIKQ 349
>gi|332177155|gb|AEE12845.1| Mammalian cell entry related domain protein [Porphyromonas
asaccharolytica DSM 20707]
Length = 298
Score = 83.8 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 83/292 (28%), Gaps = 18/292 (6%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G F + + + I +L + + V G++ + V NG VG
Sbjct: 11 VKIGFFTLLAIVILYLGITYLKGLSLSARSKTYYVAM--NDVTGINVATRVFVNGYKVGS 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + D ++ + PD L T + +G + + I
Sbjct: 69 VREMKYDYRNNGETILTLTLDPDIKLPQGTQVQVAQTLFSGALVNLVLPEVETGAYINAR 128
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
T P + E + ++++ ++N
Sbjct: 129 DTI----------PMSTRRSAKSLEQLQNEFVPRLSTTLSRMDSVLLQANAILSNPNIEP 178
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
T+ S + Q+ + I D + +D ++ + + N++
Sbjct: 179 TLSDVRQSAQHINASSAQLQQSLRSLPSIMGRIDDTSVDVANFASRLDSLQLQETIANLE 238
Query: 248 VSSNNFVKSSDQVINTVH------DVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+S + ++ + + V +D L+ D + K
Sbjct: 239 STSRELKSFTQRLNQSNGTVGRLLNEDGLYNRIDSVTSSLDALIQDIKANPK 290
>gi|254475469|ref|ZP_05088855.1| ABC transporter substrate binding protein [Ruegeria sp. R11]
gi|214029712|gb|EEB70547.1| ABC transporter substrate binding protein [Ruegeria sp. R11]
Length = 150
Score = 83.8 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 3/133 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V++ + + G E+ S++G+S + VR
Sbjct: 1 MSHNTTEVLAGGLVLAAAIGFAVYAGQAAGISS-GGSSYELNASF-RSLEGVSVGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + G+ L+ + + + ++ + + I ++GL G ++E+
Sbjct: 59 AGVKIGTVTGVDLNPQTFR-ADTRFSVQDGIEIPDDSAIVISSEGLLGGNFVEVMPGGSP 117
Query: 121 KKTIFQIATERNQ 133
A E Q
Sbjct: 118 FAFEPGDAIEDTQ 130
>gi|126432726|ref|YP_001068417.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126232526|gb|ABN95926.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 519
Score = 83.8 bits (204), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/284 (10%), Positives = 88/284 (30%), Gaps = 5/284 (1%)
Query: 1 MESKNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F V ++ + Y+L + + +P S GL + ++V
Sbjct: 1 MLTRFIKIQLIIFTVLTVIALAVLGWYYLRVPSLVGIGQYTLHAELPRS-GGLYSTANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G +G++ + + A I + +A + + G Y++L +
Sbjct: 60 YRGTTIGKVTAVEP---TERGAKATMSIDNRYRIPVDASANVHSVSAIGEQYLDLVSTGN 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ T P+ A +KI + + L
Sbjct: 117 PGQYFSDGQTITKSTVPSEVGPALDAANEGLAVLPREKIDALLTETADAVGGLGPSLQRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + I+ +N+ ++ ++ + S + ++ A +
Sbjct: 177 VDSTTLIAQDFKDNLGPVNDIIANSAPILESQVNSGDNIAQWSRNLNILAAQSAEQDAAL 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
L+ +++ V +++ ++ ++ +
Sbjct: 237 RSGLQQAAPTADQLNAVFSGVRDSLPQTLANLAVVIDMLKRYNK 280
>gi|254819939|ref|ZP_05224940.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 342
Score = 83.4 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ ++VV + F + + + +V GL + VR G+ VG++
Sbjct: 11 RLAIYVVVSVLGMFTLVALFGQLRFQSEKTYKAQFA---NVSGLEGGNFVRIAGVEVGKV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ ++ + L + L T A IR L G Y+ L + + A
Sbjct: 68 KNITVEPDST--VLVEFTAAEKVVLTEGTRAAIRFADLTGGRYVALEEGAGNIRRLSPGA 125
Query: 129 TER 131
T
Sbjct: 126 TIP 128
>gi|187924097|ref|YP_001895739.1| hypothetical protein Bphyt_2114 [Burkholderia phytofirmans PsJN]
gi|187715291|gb|ACD16515.1| Mammalian cell entry related domain protein [Burkholderia
phytofirmans PsJN]
Length = 539
Score = 83.4 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 40/450 (8%), Positives = 104/450 (23%), Gaps = 53/450 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI--------------IRIP---GSVDG 51
VG VS + Y + E + R S+
Sbjct: 120 RVGAAGVSGIGTLLSGAYIGVDVGRSTETRTEFVGLETPPPITAAQKGHRFTLHGDSLGS 179
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++ G+ LD++ + P Y
Sbjct: 180 IDIGSPIFYRRVQVGQVYGISLDKDGTG---VTMQVFVAAP------------------Y 218
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + T S + + + +
Sbjct: 219 DQYVGSNSRWWHASGVDVRLDSTGFVVNTQSLAAILVGGLAFQTPPGQPMGTPAAEKTDF 278
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + + + V +TD+ D
Sbjct: 279 RLAA--DEVDAMRAPDGIRVRTVMVFSQSLRGLSVGATVDFRGIVLGQVTDIGVEYDPQA 336
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + + + H+ + E G + + +
Sbjct: 337 RSFVMPVTLDLYPDRLRRRSRGAAMPEAGTAASHE---LLRRLVERGLRGQLRTGNLLTG 393
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ-KFA 350
F I + + + D
Sbjct: 394 QLYIALDIFPNAAPVKFDTTNEPIQLPTIPNTLDALQTQVADIAKKLDRIPFDQLGSNLN 453
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ + + N + A+ + R T + +D+
Sbjct: 454 TSLKNADALFNRLN-NEVVPQARDTLAAARQTFGSAEATLQQ--------DSPLQSDVHQ 504
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T+ + + ER+P+ +V G+
Sbjct: 505 ALQELTRTLRSLNALADYLERHPESLVRGK 534
>gi|313886790|ref|ZP_07820496.1| conserved hypothetical protein [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923754|gb|EFR34557.1| conserved hypothetical protein [Porphyromonas asaccharolytica
PR426713P-I]
Length = 298
Score = 83.4 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/292 (11%), Positives = 83/292 (28%), Gaps = 18/292 (6%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G F + + + I +L + + V G++ + V NG VG
Sbjct: 11 VKIGFFTLLAIVILYLGITYLKGLSLSARSKTYYVAM--NDVTGINVATRVFVNGYKVGS 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + D ++ + PD L T + +G + + I
Sbjct: 69 VREMKYDYRNNGETILTLTLDPDIKLPQGTQVQVAQTLFSGALVNLVLPEVETGAYINAR 128
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
T P + E + ++++ ++N
Sbjct: 129 DTI----------PMSTLRSAKSLEQLQNEFVPRLSTTLSRMDSVLLQANAILSNPNIEP 178
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
T+ S + Q+ + I D + +D ++ + + N++
Sbjct: 179 TLSDVRQSAQHINASSAQLQQSLRSLPSIMGRIDDTSVDVANFASRLDSLQLQETIANLE 238
Query: 248 VSSNNFVKSSDQVINTVH------DVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+S + ++ + + V +D L+ D + K
Sbjct: 239 STSRELKSFTQRLNQSNGTVGRLLNEDGLYNRIDSVTSSLDALIQDIKANPK 290
>gi|300784337|ref|YP_003764628.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793851|gb|ADJ44226.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 346
Score = 83.4 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 99/286 (34%), Gaps = 9/286 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+VG + ++ + + S + G S GL+ D+ V G+ V
Sbjct: 11 NQAAVGAVALVLIV-LVTATTYFSDQLPFFGNGTTYSAYFGESA-GLAADNEVEVAGVKV 68
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + L L K ++ D + +TTA+I + L G Y+ L +
Sbjct: 69 GTVSSVKLAG---KQVLVKFRVK-DIRVGDATTASIEIKTLLGEKYLALDPKGGGAQEPN 124
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
Q + R + + + +K+++DS + +++ + L T+ + +
Sbjct: 125 QTIPQARTRTPFQLQDAFEQLSTTVGDIDTKQLADSFNALSDSLKDSPQYLKDTLTGLSS 184
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
++ +++ + + ++ T + +N +L Q +N +L
Sbjct: 185 LARTVSSRDADLHTLLANTSQVSKTLSDRNAQLQRVISDGNLLLTELQNRKQAINALLTG 244
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
Q S V + ++ T + +V + +
Sbjct: 245 TQQLSQQLT---GLVQDNREQLKPTLEKLGKVTDILQRNQGNLDKS 287
>gi|58584279|ref|YP_197852.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Wolbachia endosymbiont
strain TRS of Brugia malayi]
gi|58418595|gb|AAW70610.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Wolbachia endosymbiont
strain TRS of Brugia malayi]
Length = 151
Score = 83.4 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 5/130 (3%)
Query: 4 KNY--YTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ + GLFV+ +F +FF+I LS + ++ + +G+ SV+
Sbjct: 3 RSNILEITAGLFVLVFTIFLAFFAINKLSDIKKSYKGCYKIY-GFFSNANGIEVGDSVKI 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G I G+ LD+ + I D L ++A I + G+ G ++ +S
Sbjct: 62 SGVNIGSITGISLDKATY-VARLDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGSGI 120
Query: 121 KKTIFQIATE 130
K E
Sbjct: 121 KLISNGGKIE 130
>gi|162451971|ref|YP_001614338.1| putative ABC-type organic solvent resistance transport system
substrate-binding protein [Sorangium cellulosum 'So ce
56']
gi|161162553|emb|CAN93858.1| putative ABC-type organic solvent resistance transport system
substrate-binding protein [Sorangium cellulosum 'So ce
56']
Length = 340
Score = 83.4 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 33/332 (9%), Positives = 87/332 (26%), Gaps = 12/332 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ VG+ +++ L I + N P + + + GL T + V+ G+
Sbjct: 5 RSIEVKVGILILTALGLLATFILVMGGVN--FQPKYSIYVDF-DNPGGLQTGAPVKIAGV 61
Query: 64 PVGRIVGLFL-------DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIEL 114
+G++ + D + + + ++ + T + TQG+ G ++ +
Sbjct: 62 EIGKLSEIHFSGGKLGKDGKREPLVRIQLRLEERYQQSIHDNATFYVTTQGVLGEQFLAI 121
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
++ I A R Y + +A ++ +
Sbjct: 122 EPGSTDRPVIPPNAVVRGLDPPRLDMLLAEGYELLHATVSAMREHREEVGEAFDGLRKTL 181
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
T + + T V N L + A
Sbjct: 182 KGTGEFMHRNQDRLDRIAENVEQMSVDGTDLVKDARQRYVNNPQIDRILANTDQLTGTAA 241
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+++ + ++ +R+T E+ + +D +
Sbjct: 242 RDLPPLMADARETLANARRLSTTVGGETEQVKIRKTLDDIAEIAGRARAATADAQEVLAH 301
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ + + +
Sbjct: 302 VKRGKGTVGALVMDEQLFDDLQELARDLKHNP 333
>gi|186475417|ref|YP_001856887.1| hypothetical protein Bphy_0651 [Burkholderia phymatum STM815]
gi|184191876|gb|ACC69841.1| Mammalian cell entry related domain protein [Burkholderia phymatum
STM815]
Length = 534
Score = 83.4 bits (203), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/446 (9%), Positives = 104/446 (23%), Gaps = 51/446 (11%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVII--RIPGSVDG------------LSTDSSVRF 60
+ L F + + + V G L+ S V F
Sbjct: 123 IGTLLSGAFVGMDIGHAKHERRDYTGLEDPPVFASDVPGREFVLKTSNLASLNVGSPVYF 182
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ VG++ LD++ + + P Y
Sbjct: 183 RRLRVGQVTSFQLDKDGGG---ITLHVFVNAP------------------YDSYVKSDSR 221
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAE-NTSKKISDSSRHIQKIIENIEKPLTTT 179
I + T S ++ I T +
Sbjct: 222 FWEAGGIDVSLGTEGVKINTQSLVSILIGGLAFETPPSSLAEPAAPAHTPFTLFATRADA 281
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + I N + + + I + K +
Sbjct: 282 MKVQDRIVDTYVLNFKESVRGLTVGAPVDFRGIVLGEVSAIYTRFDPVTK-----QISIP 336
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+I + ++ + D + G + +
Sbjct: 337 VEIKFFPERFTSRYANGKPDSGRAFSDPKSIADFLVSRGFRGQLKTGSLLTGQLYVSFDF 396
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-NDSSQKFAELMSKINN 358
F + R+ + + + S + I Q A+ ++ +
Sbjct: 397 FPNAPKTTIDWSRTPAELPTQPSGLQSLQESINRIVARIDKLPLEQIGQNAAQTLADTSA 456
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
+ + A+ + + T N + + D + +R+L T
Sbjct: 457 LMQSLNTQ-VVPQAKSTLSAAQTTLNSANSALAP--------DSTLQQDTSDAIRELART 507
Query: 419 VNHFDDCLNNFERNPQDIVWGREKGS 444
F + +R+P+ ++ G+++ +
Sbjct: 508 AASFRALSDYLQRHPEALLRGKQEDA 533
>gi|84499428|ref|ZP_00997716.1| hypothetical protein OB2597_05855 [Oceanicola batsensis HTCC2597]
gi|84392572|gb|EAQ04783.1| hypothetical protein OB2597_05855 [Oceanicola batsensis HTCC2597]
Length = 149
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 7/135 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGP--MAEVIIRIPGSVDGLSTDSSV 58
M VG ++L + R G + S +G++ + V
Sbjct: 1 MSRTTTEVVVGG---AVLALALGFAVHAGRIAGIGGSPAGYPLSASF-RSAEGVALGTDV 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG + G+ LD + +R + ++ I ++GL G ++E+
Sbjct: 57 RLAGVKVGSVTGIDLDPATFR-ARTTFTVRDGVEIPDDSSVVISSEGLLGGNFVEILPGG 115
Query: 119 KEKKTIFQIATERNQ 133
Q
Sbjct: 116 SPFNYAEGDEVLDTQ 130
>gi|118464539|ref|YP_881725.1| virulence factor Mce [Mycobacterium avium 104]
gi|118165826|gb|ABK66723.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 342
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 43/123 (34%), Gaps = 5/123 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ ++VV + F + + + +V GL + VR G+ VG++
Sbjct: 11 RLAIYVVVSVLGMFTLVAVFGQLRFQSEKTYKAQFA---NVSGLEGGNFVRIAGVEVGKV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ ++ + L + L T A IR L G Y+ L + + A
Sbjct: 68 KNITVEPDST--VLVEFTAAEKVVLTEGTRAAIRFADLTGGRYVALEEGAGNIRRLSPGA 125
Query: 129 TER 131
T
Sbjct: 126 TIP 128
>gi|319943544|ref|ZP_08017826.1| paraquat-inducible protein B [Lautropia mirabilis ATCC 51599]
gi|319743359|gb|EFV95764.1| paraquat-inducible protein B [Lautropia mirabilis ATCC 51599]
Length = 584
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/407 (9%), Positives = 108/407 (26%), Gaps = 34/407 (8%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L S V + + VGR+ G LD+ + ++P
Sbjct: 201 DLGSLDIGSPVLYRRVTVGRVTGYSLDESGD---RVTIDVFVNSP--------------- 242
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
Y + + + + T S + + S +
Sbjct: 243 ---YDRFVGTNSRFWEASGVEAKLDSSGVSVRTQSLLTVALGGIAFASPIEGKGEAANEH 299
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + S L N + + + I ++
Sbjct: 300 TAFMLAASEADAMKKPDGPSRFLVLNFDQSLRGLQVGAIVDFRGVELGQVRAIDAVVDEN 359
Query: 228 DK--MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + +++ + + + + + Q + G +
Sbjct: 360 TNEIHMPVLIEVFSDRMKRGRGLQAQGPLGAGMTQKELEEEGNRWLQNMVQRGLRAQLRT 419
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT---------IE 336
+ + F + +++ + + + + + I +
Sbjct: 420 GNLLTGQLYVSLDFFPQAKPAEMRSVQGDLMELPTVGNSLDEFQQQIAEILAKINKVPFD 479
Query: 337 NITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN 396
I +L + ++ +N L + + + T + +R + S
Sbjct: 480 QIGRDLQQTLAGMRRTVNAAEKTVKGLNDN-LAPQLMGTIQSLKKTLDSADRTLVSANRT 538
Query: 397 LQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
L + S ++Q +R + + + + ER+P+ ++ G+
Sbjct: 539 LASDS-PTQEELQQTLRSVSKAADSLRRLTDYLERHPESLLRGKTGN 584
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 38/463 (8%), Positives = 110/463 (23%), Gaps = 45/463 (9%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQ 75
+L +I Q + + +GL + +R+ + VG++ + L
Sbjct: 59 LLAALVGAIL---TYRQMTQHGPTITVSFKT-AEGLEAGKTKLRYKDVEVGQVKSIELA- 113
Query: 76 EYPNHSLAKALIRPD-------------TPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ +H + + L YI + + +
Sbjct: 114 DDRSHVEVDIELNRKAGSFRAKDSRYWVVRPRADISGVSGLGTLLSGAYIGVDAGKSAEM 173
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAEN--------TSKKISDSSRHIQKIIENIEK 174
E S + + +
Sbjct: 174 VSTFEGLESPPPLKYDEAGSQFRLRAKDLGSLDIGSPVLYRRVTVGRVTGYSLDESGDRV 233
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + + + + + S +++ I +
Sbjct: 234 TIDVFVNSPYDRFVGTNSRFWEASGVEAKLDSSGVSVRTQSLLTVALGGIAFASPIEGKG 293
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ---------EVGQKIDHLL 285
+ + ++ K V + ++ + Q ++ +
Sbjct: 294 EAANEHTAFMLAASEADAMKKPDGPSRFLVLNFDQSLRGLQVGAIVDFRGVELGQVRAID 353
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI--ENITSNLN 343
+ +E +D R + QK + +N+
Sbjct: 354 AVVDENTNEIHMPVLIEVFSDRMKRGRGLQAQGPLGAGMTQKELEEEGNRWLQNMVQRGL 413
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRA------MHTFRDTSEKINRYIPSIGNNL 397
+ + L++ +S + + + + T ++ ++ + I I +
Sbjct: 414 RAQLRTGNLLTGQLYVSLDFFPQAKPAEMRSVQGDLMELPTVGNSLDEFQQQIAEILAKI 473
Query: 398 QNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
D+Q + ++ TVN + + N + G
Sbjct: 474 NKVPFDQIGRDLQQTLAGMRRTVNAAEKTVKGLNDNLAPQLMG 516
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 29/257 (11%), Positives = 80/257 (31%), Gaps = 9/257 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPDT 91
DGP +++ S+ GL + V F G+ +G++ + + H + D
Sbjct: 316 DGPSRFLVLNFDQSLRGLQVGAIVDFRGVELGQVRAIDAVVDENTNEIHMPVLIEVFSDR 375
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
++ QG G + + + + + +R RA + +
Sbjct: 376 MKRGR---GLQAQGPLGAGMTQKELEEEGNRWLQNM-VQRGLRAQLRTGNLLTGQLYVSL 431
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP--H 209
+ + R +Q + + + + I+ +LA +
Sbjct: 432 DFFPQAKPAEMRSVQGDLMELPTVGNSLDEFQQQIAEILAKINKVPFDQIGRDLQQTLAG 491
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ N + +Q + + L++ + + ++ T ++++
Sbjct: 492 MRRTVNAAEKTVKGLNDNLAPQLMGTIQSLKKTLDSADRTLVSANRTLASDSPTQEELQQ 551
Query: 270 TTQTFQEVGQKIDHLLS 286
T ++ + + L
Sbjct: 552 TLRSVSKAADSLRRLTD 568
>gi|29832439|ref|NP_827073.1| mce-related protein [Streptomyces avermitilis MA-4680]
gi|29609558|dbj|BAC73608.1| putative mce(mammalian cell entry)-related protein [Streptomyces
avermitilis MA-4680]
Length = 374
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 39/373 (10%), Positives = 113/373 (30%), Gaps = 12/373 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V + L + + W V P +V G+ S VR G+ +G +
Sbjct: 7 RVAVVTALALVAALTYVLW------PRSESVHVTAYFPRTV-GIYPGSDVRVLGVRIGEV 59
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + + + + A I + Y++L + ++ + A
Sbjct: 60 EKITPEGD---RVRVELKYDEGRRVPADSKAAIINSSVVSDRYVQLLPVYRKGPVLRNGA 116
Query: 129 TERNQRAMITATPS-GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
R + + A+ + ++ + +++ L N+
Sbjct: 117 VIPESRTAVPVELDRVFGSLHTTADALGPQGANKDGSLSRLLGVSADNLDGQGENLNRTV 176
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
L+ ++ + T + + D A ++ +++
Sbjct: 177 EDLSQAVTTLSDGRKDLFGTVRNLQVFTAALSADDKSVRSFNTGLAEVAGQLAGERKDLA 236
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS-KETSAFLENIAD 306
+ N + V V + + + + + K+ +L + + E + + +
Sbjct: 237 DALKNLGTALGDVSAFVKNNKRSLNSNVKGLSKVTKVLVTQRAALAELLEVAPTGLSNLN 296
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+ N + R Q Q + + ++ T + + EL +++ + + +
Sbjct: 297 NAYNPSAGTLDTRNNAQQAQDPAALMCSVLKTTGDEGGKNPDCKELKKLFDSLPKVPQGS 356
Query: 367 SLFKDAQRAMHTF 379
++ R +
Sbjct: 357 AVTGTVDRTLGGI 369
>gi|94971543|ref|YP_593591.1| hypothetical protein Acid345_4517 [Candidatus Koribacter versatilis
Ellin345]
gi|94553593|gb|ABF43517.1| Mammalian cell entry related protein [Candidatus Koribacter
versatilis Ellin345]
Length = 359
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/360 (13%), Positives = 119/360 (33%), Gaps = 26/360 (7%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ VG+ V+ I+ +S ++ +++ + GL + VR G+
Sbjct: 8 RWAQLRVGITVIFATATLCVLIFLMSGTSGIFTRKVTLVVY-QDNAGGLRIGAPVRLQGV 66
Query: 64 PVGRIVGLFL--DQEYPNH-SLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLR 118
+G + + + D +P K I ++ TAT+ T G+ G T++++ + +
Sbjct: 67 DIGNVTSIGVVTDPNHPADPVQIKFKISSKFQPLVHLDATATLATAGVLGETFVDIDSRQ 126
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + PS + S Q ++N++ L
Sbjct: 127 TKDRM-----VKDGDILKSKDEPSFNDVVKST---------------QGTLQNVDVLLQR 166
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
I + + I ++ ++ + N I+ S+ K+I +L
Sbjct: 167 ADRIFAFIESGQGSIGKLIYDQELYNRLNSTLNEVQAMVNQISSGKGSIGKLINDDELYN 226
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + + + I + E K + L+ D + +
Sbjct: 227 KANASVDKLAKIIDEIDKGEGTIGKLLKDPSLYNNANETITKANSLIGDINQGKGALGKF 286
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
A E A + S +++I D + + + + +N + + + L+ I
Sbjct: 287 AKDEAFAKKLDDTMSHLASISAKIDNGEGSVGKLMNDPALYNNTDQALVETRHLLQAIRE 346
>gi|83311842|ref|YP_422106.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Magnetospirillum
magneticum AMB-1]
gi|82946683|dbj|BAE51547.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Magnetospirillum
magneticum AMB-1]
Length = 162
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M T +G V+++ F Y + + +G I SV GL T + V+
Sbjct: 1 MGRNLIETIMGAVVLAVAGFFLVFAYTHANLKKIEG---YEITGTFASVGGLDTGADVKI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NGI VG + LD + K I L T A++ ++GL G +I+L+ +
Sbjct: 58 NGIKVGTVAAQTLDPVTYDAV-VKLSIAHGISLPSDTVASVSSEGLLGGKFIKLTPGKST 116
Query: 121 KKTIFQIATERNQRA 135
A ++
Sbjct: 117 SMIAAGGALGPSKNF 131
>gi|77361457|ref|YP_341032.1| ABC transporter periplasmic substrate-binding protein
[Pseudoalteromonas haloplanktis TAC125]
gi|76876368|emb|CAI87590.1| putative transport protein (ABC superfamily, periplasmic binding
component) [Pseudoalteromonas haloplanktis TAC125]
Length = 182
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ VG FV + ++ + G + + ++ L + ++
Sbjct: 1 MNSRKLEILVGFFVALGILAFAMLALKVANTGISGSGDTYTLNAKF-ENIGSLKPRAPIK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
G+ +GR+ +++ + I +++ +I T G+ G Y
Sbjct: 60 VGGVVIGRVESIYVHPQEFLPV-VNMTIDAQYLCRFSDTSSISILTSGILGEQY 112
>gi|324999473|ref|ZP_08120585.1| MCE family protein [Pseudonocardia sp. P1]
Length = 447
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/282 (10%), Positives = 85/282 (30%), Gaps = 6/282 (2%)
Query: 1 MESKNYYTSVGLFV-VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F+ ++++ S+ ++ + V + P G+ +++V
Sbjct: 1 MVTRFVRIQLIVFIALTVVAALMISLVYVRVPSLLGVGHVTVTGQFPA-AGGIYPNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + L + I D + A IR+ G Y++L
Sbjct: 60 SRGVTIGKVTDVELVPDG---VDVTMSIEEDRAPAADSRAEIRSVSAIGEQYVDLVGGSG 116
Query: 120 EKKTIFQIATERNQRAMITAT-PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ ++ ++ + A K+ + +I L
Sbjct: 117 GEILADGTTIPPDRTSVPVPIADVLNSTDQLLASVPQDKLELFVDQAEAAFRDIGPDLGG 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N + N +++ + + +
Sbjct: 177 LVDNTRALVQTADENYDPTVGLLNDFPRFADPQLATSDAIRSWTSDLGVFTDQLRTSDAD 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ IL + ++ + +V D +TT ++ +
Sbjct: 237 LRSILTTVPKAATKAENLISSLSRSVPDFLDTTGIVAKLAED 278
>gi|254821780|ref|ZP_05226781.1| hypothetical protein MintA_17742 [Mycobacterium intracellulare ATCC
13950]
Length = 573
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++ + + +I++L + V GL +++V
Sbjct: 1 MHDRLTRIQLAIFAVITAITLTVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L +A+ + +T + + TAT+++ G Y
Sbjct: 60 YRGVAVGRVESVGLSPNG---VIAQMRLNSETAIPSNVTATVKSVSAVGEQY 108
>gi|254479912|ref|ZP_05093160.1| mce related protein [marine gamma proteobacterium HTCC2148]
gi|214039474|gb|EEB80133.1| mce related protein [marine gamma proteobacterium HTCC2148]
Length = 322
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 4/109 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K + ++G FVV L + +I + + + + V++ GSV GL+ + V
Sbjct: 1 MSEKPHTVAIGAFVVGALLIAISTIIFALGTG-FGKERSTVVMVFEGSVKGLTIGAPVAL 59
Query: 61 NGIPVGRIVGLFLDQEYPNH---SLAKALIRPDTPLYPSTTATIRTQGL 106
G+ +G++ + L + L +A IR + T A T+ L
Sbjct: 60 RGVQIGQVTAIELILDADTVELIMLVEAEIRGENIRRTGTNAESLTEEL 108
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 19/206 (9%), Positives = 56/206 (27%), Gaps = 3/206 (1%)
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
IL + +F +S ++ + T +++ L + +
Sbjct: 118 NTQSILTGLLYIQLDFHPNSKLILAEIDSPHLQIPTIPTGLERLTRKLESIDFAKIASDL 177
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
A I ++ + + ++S ++
Sbjct: 178 EATASGINAFVTSESFQELPAQLQDTLSSVTGLSKQLQVQLSSTGPRLDAVLDGAAITVD 237
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+A E L + + + + + + L + + + ++ +R+L +
Sbjct: 238 --TANTELPKLAELITSNLEVLKAAIQAFEEGMDGV-EKLVDHDSATVYELNRALRELSQ 294
Query: 418 TVNHFDDCLNNFERNPQDIVWGREKG 443
E P+ ++ GR
Sbjct: 295 AGRALQQLGRALEEQPESLIRGRTGE 320
>gi|257054987|ref|YP_003132819.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584859|gb|ACU95992.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 336
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 44/127 (34%), Gaps = 6/127 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
FV+ + +S G R V L+ VR G+ VG++ GL
Sbjct: 13 AFVLVTTVATVLLAVSISNVGV--GQRVGYSARFTD-VTSLNVGDDVRIAGVRVGQVDGL 69
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE-KKTIFQIATE 130
+ + + + + PL TATIR + + G YI L + + A
Sbjct: 70 EII--DRHIARVRFSVDATRPLPADVTATIRYRNMLGQRYIALERGDPPSSERLRPGAEI 127
Query: 131 RNQRAMI 137
+R
Sbjct: 128 PLERTRP 134
>gi|108797103|ref|YP_637300.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866188|ref|YP_936140.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108767522|gb|ABG06244.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692277|gb|ABL89350.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 519
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/284 (10%), Positives = 86/284 (30%), Gaps = 5/284 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F V + Y+L + ++ +P S GL ++V
Sbjct: 1 MLTRFIKIQLIIFTVLTVIALVALGWYYLRVPSLMGIGQYKLYAELPRS-GGLYETANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G +G++ + + A I + +A + + G Y++L +
Sbjct: 60 YRGTTIGKVTAVEP---TERGAKATMSIDNRYRIPVDASANVHSVSAIGEQYLDLVSTGN 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ T P+ A +KI + + L
Sbjct: 117 PGQYFSDGQTITKSTVPSEVGPALDAANEGLAVLPREKIDALLTETADAVGGLGPSLQRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + I+ +N+ ++ ++ + S + ++ A +
Sbjct: 177 VDSTTLIAQDFKDNLGPVNDIIANSAPILESQVNSGDNIAQWSRNLNILAAQSAEQDAAL 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
L+ +++ V +++ ++ ++ +
Sbjct: 237 RSGLQQAAPTADQLNAVFSGVRDSLPQTLANLAVVIDMLKRYNK 280
>gi|166363330|ref|YP_001655603.1| hypothetical protein MAE_05890 [Microcystis aeruginosa NIES-843]
gi|166085703|dbj|BAG00411.1| hypothetical protein MAE_05890 [Microcystis aeruginosa NIES-843]
Length = 443
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 53/398 (13%), Positives = 129/398 (32%), Gaps = 16/398 (4%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
W+ + ++I V+GL + VRF G+ VGRI N
Sbjct: 22 VFGALAIWVRG-GGFGQRTYQLIFEF-ADVEGLQVGAPVRFRGVRVGRITSFIP---GSN 76
Query: 80 HSLAKALIRPDTPL-YPSTTATIRTQGLAGITYIELSTLRK---EKKTIFQIATERNQRA 135
A I T + T T GL G I+++ L E K + +A + +Q+
Sbjct: 77 QVEVIAEIASATLVMPRKVTVTTNLSGLIGEAAIDITPLVSLSAEAKNLDPLAPDCDQQL 136
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
++ + ++ ++ D+ + + + T IA + + +
Sbjct: 137 ILCNNTRLQGTTGTQLMSSVGRLVDTFTSPEFVGNLNDVTKNTAIAAQKIARLSDDTSQT 196
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ ++++ + + + + + + + +QI Q SS
Sbjct: 197 IRNAQREISRLSLELATTSRSVTNTANNASRFVNTLDNTVQENRSQISRTFQQSSQLVAN 256
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ + + +T + I L ++ ++ + N+ + +
Sbjct: 257 LNAVLSENRGQIVDTLGNINQASLGIGSLANNLNNTALRLNAGLDEIDTKQVMQNIETIL 316
Query: 316 SAIREITDQRQKIISTINTIENIT------SNLNDSSQKFAELMSKINNISALKENNSLF 369
+ E ++ ++I TIN I + + + ++ S I+ + +
Sbjct: 317 NNAVETSNNLREITKTINDPATIVVLQKTLESARVTFENTQKITSDIDELIGDPQFRENL 376
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + + E++ + I L +Q
Sbjct: 377 RRLIDGLSNLLSSGEQLEYNL-RIAQTLDTMTQELAKQ 413
>gi|163736131|ref|ZP_02143550.1| Mammalian cell entry related protein [Phaeobacter gallaeciensis
BS107]
gi|161390001|gb|EDQ14351.1| Mammalian cell entry related protein [Phaeobacter gallaeciensis
BS107]
Length = 150
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 3/133 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V++ + ++ G E+ S++G+S + VR
Sbjct: 1 MSHNTTEVLAGGLVLAAAIGFAVYAGQAAGLSR-AGSSYELNASF-RSLEGVSVGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + G+ L+ + + + ++ + + I ++GL G ++E+
Sbjct: 59 AGVKIGTVTGVDLNPQTFR-ADTRFSVKDGIEIPDDSAVVISSEGLLGGNFVEVMPGGSP 117
Query: 121 KKTIFQIATERNQ 133
A E Q
Sbjct: 118 FAFEAGDAVEDTQ 130
>gi|120404933|ref|YP_954762.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957751|gb|ABM14756.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 425
Score = 83.4 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 44/352 (12%), Positives = 97/352 (27%), Gaps = 12/352 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ GL V +L + + ++ V S +GL VR
Sbjct: 1 MSARLRRARGGLAAVLVLTLAAGFLVAARAADHV--ERIWVTAYFENS-NGLFAGDDVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVGR+ + + + + P+ A I + L I+L+
Sbjct: 58 LGVPVGRVDSIRPEP---TRARITFWVDRRYPVPADAKAVILSPQLVTGRAIQLTPAYTG 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS-----SRHIQKIIENIEKP 175
+ +R + + + + I +N+
Sbjct: 115 GPVMPTGTVVGQERTAVPVEWDDVRVQLQRLTKLLRPTEPGGVSTLGAFINTTADNLRGQ 174
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ +S LA H D + T + + + + + + ++
Sbjct: 175 GANIRQTVVKLSQALAILGDHSDDIFTTFTNLSTLVSALHDSADLLEQLNQNMAAVTSLI 234
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKS 294
++ +Q + + + T T V + D L + +
Sbjct: 235 ADDPQKVARTVQDLGGVIGDVKEFADDNREAIGTATDTLASVSTALVDSLDDLKQTLHIA 294
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
T A NI + + + A+ + I I + +
Sbjct: 295 PGTVANFHNIFEPANGSLTGALAVNNFANPISFICGAIQAASRHGAEQSAKL 346
>gi|221213426|ref|ZP_03586401.1| mce family protein [Burkholderia multivorans CGD1]
gi|221166878|gb|EED99349.1| mce family protein [Burkholderia multivorans CGD1]
Length = 189
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 20 FSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP 78
F + + P V ++ ++ GL ++V+ G+ VGR+ + D
Sbjct: 22 ALLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVKSAGVVVGRVKSIGFDPNTY 80
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
++ + P ++A I T GL G YI L +
Sbjct: 81 -QAVVTVDLDSQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEM 123
>gi|312888065|ref|ZP_07747649.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
gi|311299546|gb|EFQ76631.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
Length = 331
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/130 (18%), Positives = 54/130 (41%), Gaps = 1/130 (0%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GLFV++ L + Y + ++ G E+ +R +++GL ++V F+GI
Sbjct: 7 NNVKLGLFVLAGLLVMMVAFYMIGKNRNIFGSDFELKVRFT-NLNGLMEGNNVLFSGIQA 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + + + + T ++ + A+I T+GL G + + + ++
Sbjct: 66 GTVKSIEMINDTTIQVNMVIDSKIKTFIHKNALASIGTEGLMGNKVVNIQPGKDAGSSVN 125
Query: 126 QIATERNQRA 135
Q
Sbjct: 126 TGDLLTAQHM 135
>gi|253995675|ref|YP_003047739.1| Mammalian cell entry related domain-containing protein
[Methylotenera mobilis JLW8]
gi|253982354|gb|ACT47212.1| Mammalian cell entry related domain protein [Methylotenera mobilis
JLW8]
Length = 178
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 38/117 (32%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FV + + ++ GL + V+
Sbjct: 1 MDRTKIDLWVGIFVALGAAALLGLAMKVGNLTSSKIGETYSVSASFENIGGLKPSAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + ++ I T A I T GL G YI L
Sbjct: 61 AGVVVGRVADISFDAKSY-VAVVTIKIDKRYQFPKDTFANIYTAGLLGEQYIGLEAG 116
>gi|87123070|ref|ZP_01078921.1| possible ABC transporter [Synechococcus sp. RS9917]
gi|86168790|gb|EAQ70046.1| possible ABC transporter [Synechococcus sp. RS9917]
Length = 294
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/282 (15%), Positives = 84/282 (29%), Gaps = 8/282 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG +V + ++ W+ + V + GL S V +
Sbjct: 1 MRRSVREAIVGFSIVGAIAAFAGAMLWMRGI-RLGAETWTVTVSF-DDAGGLDARSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI VG + + + E LA I PD L TA++ L G L
Sbjct: 59 RGILVGSVRSINVTPE---AVLATLEINEPDLRLPLPVTASVGAASLLGG--DAQVNLIS 113
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ K + A + ++ IS E S +S EK ++
Sbjct: 114 QNKPLPADAPRPKSKRCSGSSVLCDGAQISGVEAPSLDTVTASMQRLLQQAEQEKLVSNL 173
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + + + I+++ + ++ N + K I A
Sbjct: 174 VGSTKQFDATAEDVQKLIEQLSREVARAQPTINNLNKATAEAAEASVHIKNIAAAFDNPQ 233
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
VS+ + + + + TF + + +
Sbjct: 234 TVNQLKQTVSNARSMTQKFDAVGGDVEKLTSDPTFMKAVRDV 275
>gi|302551009|ref|ZP_07303351.1| mce family protein [Streptomyces viridochromogenes DSM 40736]
gi|302468627|gb|EFL31720.1| mce family protein [Streptomyces viridochromogenes DSM 40736]
Length = 341
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 69/198 (34%), Gaps = 5/198 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G +++L + + R G GL VR G+ VG+
Sbjct: 25 VVIGAVGLTVLALLAVAAFNADRLPVI-GDGETYSAAFAE-AGGLKPGDEVRIAGVKVGK 82
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + LD + H I+ D T A+IR + + G Y+ L + +
Sbjct: 83 VEEVDLDGD---HVKVTFKIKDDPEFGTETGASIRVKTILGAKYLALHPKGRGRLEPGSE 139
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + + ++ + + +++ + I E+ + +I + IS
Sbjct: 140 IPLKRTVPAYDVVQAFSDLTTTSEKVDTDRLAKALDTISTTFEDSPSEVRASIKGLSRIS 199
Query: 188 TVLANNISHIDKMMHTTQ 205
+A+ + +++ +
Sbjct: 200 RTVASRDKALRELLGHAK 217
>gi|118469807|ref|YP_884760.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118171094|gb|ABK71990.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 342
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 45/133 (33%), Gaps = 5/133 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ V F+ F + G + + + GL VR G+
Sbjct: 7 STLIRVSAFLTVCAVGVFALFSIFADLR--FGERKQYTAQFSD-ISGLKEGDFVRIAGVE 63
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + +D+ L + + L ++TA IR L G Y+EL + +
Sbjct: 64 VGQVQKVSMDEN--ALVLVEFAMEDSVELTSTSTAVIRYDNLIGGRYLELKQGEEPGAVL 121
Query: 125 FQIATERNQRAMI 137
AT R
Sbjct: 122 QAGATIPLARTRP 134
>gi|56751171|ref|YP_171872.1| hypothetical protein syc1162_c [Synechococcus elongatus PCC 6301]
gi|81299162|ref|YP_399370.1| putative ABC transport system substrate-binding protein
[Synechococcus elongatus PCC 7942]
gi|56686130|dbj|BAD79352.1| hypothetical protein YCF22 [Synechococcus elongatus PCC 6301]
gi|81168043|gb|ABB56383.1| putative ABC transport system substrate-binding protein
[Synechococcus elongatus PCC 7942]
Length = 377
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 40/383 (10%), Positives = 118/383 (30%), Gaps = 31/383 (8%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ SVGL +V+ + I+WL + +VI+ + GL+ + V
Sbjct: 1 MRSRVVREGSVGLMLVAGVGALAGLIFWLRGVS-LGQDRYDVIVEFNDTA-GLTVGTPVI 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VG+++ + L + I+P + + + + L G + + R
Sbjct: 59 YRGVQVGQVIDITAQSNS---VLVRIQIQPASLAIPRDSVISAQISSLLGSPNLTIEPKR 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ R+ ++E +
Sbjct: 116 NIPAEVLAKTQPRSPNCD----------------------RAVILCNGSVVEGAQSASFA 153
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+I ++ + T++ ++ S ++ +
Sbjct: 154 SILTSIATLVSEIEQAKLVNTLSQTSRDASEAARSIRQLSSSLQQQIPPLRETLNAAQGA 213
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID--HLLSDFSSKMKSKE 296
+Q+ I + + + + ++ ++++ + + K + L+ + + +
Sbjct: 214 ASQVEAAIAENRQSVRTTLTNLESSSQELQDILNSLEPAIDKANSGKLVDNLNELSANLA 273
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
++ + N ++ +++ D + I + L + I
Sbjct: 274 VASRNIRDVSTALNSPENLLTLQQTLDSARITFQNAQKITTDLNRLTGDPAVIENIRRLI 333
Query: 357 NNISALKENNSLFKDAQRAMHTF 379
N++ L + ++ + +
Sbjct: 334 NSLGRLLSSTGALQEQVTDLKSL 356
>gi|296159252|ref|ZP_06842078.1| Mammalian cell entry related domain protein [Burkholderia sp.
Ch1-1]
gi|295890511|gb|EFG70303.1| Mammalian cell entry related domain protein [Burkholderia sp.
Ch1-1]
Length = 539
Score = 83.1 bits (202), Expect = 8e-14, Method: Composition-based stats.
Identities = 49/449 (10%), Positives = 112/449 (24%), Gaps = 51/449 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-----------------IRIPGSVDG 51
VG VS + Y + E + + S+
Sbjct: 120 RVGASGVSGIGTLLSGAYIGVDVGRSKETRTEFVGLETPPPITADQKGHRFVLHGDSLGS 179
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++ G+ LD++ + P R +G+
Sbjct: 180 IDIGSPIFYRRVQVGQVYGIALDKDGTG---VTMQVFVAAPYDQYVGTNSRWWHASGVNV 236
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S A A T + + + ++
Sbjct: 237 RLDSAGFVVNTQ-SLAAILVGGLAFQTPPGQQMGVQAAEKTDFRLASDETDAMRAPDGIP 295
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + + + V T DL +
Sbjct: 296 VRAVMNFNQSLRGLSVGAVVDFRGIALGQVTGIGVEYDPQTQSFTMPVTLDLYPDRLRRR 355
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++ + + T + + ++ K + D S
Sbjct: 356 ARSATMPQARTAASHELLRRLVERGLRGQLRTGNLLTGQLYIALDIFPKAAPVKFDVGSD 415
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
T + + + I SNLN S +
Sbjct: 416 PVELPTIPNTLDALQVQVADIAKKLDRIP--------------FDQIGSNLNTSLKNADA 461
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L +++N N + A+ + R T + +D+
Sbjct: 462 LFNRLN--------NEVVPQARDTLAAARQTFGSAEATLQR--------DSPLQSDVHEA 505
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T+ + + ER+P+ +V G+
Sbjct: 506 LQELTRTLQSLNALADYLERHPESLVRGK 534
>gi|221201637|ref|ZP_03574675.1| mce family protein [Burkholderia multivorans CGD2M]
gi|221207288|ref|ZP_03580298.1| mce family protein [Burkholderia multivorans CGD2]
gi|221172876|gb|EEE05313.1| mce family protein [Burkholderia multivorans CGD2]
gi|221178453|gb|EEE10862.1| mce family protein [Burkholderia multivorans CGD2M]
Length = 189
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 39/104 (37%), Gaps = 3/104 (2%)
Query: 20 FSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP 78
F + + P V ++ ++ GL ++V+ G+ VGR+ + D
Sbjct: 22 ALLFLALKVGNMSSLSFQPTYSVRMKF-DNIGGLKPRAAVKSAGVVVGRVKSIGFDPNTY 80
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
++ + P ++A I T GL G YI L +
Sbjct: 81 -QAVVTVDLDSQYPFPKDSSAKILTSGLLGEQYIGLDPGGDTEM 123
>gi|109896887|ref|YP_660142.1| hypothetical protein Patl_0559 [Pseudoalteromonas atlantica T6c]
gi|109699168|gb|ABG39088.1| Mammalian cell entry related protein [Pseudoalteromonas atlantica
T6c]
Length = 154
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 45/120 (37%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ VGLFVV L + G + ++ GL S+V+
Sbjct: 1 MSSRKAEIMVGLFVVLTLAAGLLLALKVVNQGMSSGTGTYTLYAKFDNIGGLKARSAVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I + +++ +I T GL G Y+
Sbjct: 61 GGVTVGRVDNISLDPDGYTPV-VELKIYQEYNKFPETSSVSILTSGLLGEQYVGFQPGFS 119
>gi|307725957|ref|YP_003909170.1| Mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1003]
gi|307586482|gb|ADN59879.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1003]
Length = 542
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/453 (8%), Positives = 101/453 (22%), Gaps = 53/453 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-----------------IRIPGSVDG 51
+G VS + Y + + + S+
Sbjct: 123 RIGASGVSGIGTLLSGAYIGVDAGRSKETRDTFVGLEAPPPVTADQKGRRFTLHGDSLGS 182
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++ GL LD++ + P Y
Sbjct: 183 IDIGSPIFYRRVQVGQVYGLSLDKDGKG---VTMQVFVAAP------------------Y 221
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + T S + + +
Sbjct: 222 DQYVGTNSRWWHASGVNVRLDSSGFVVNTQSVTSILVGGL-----SFRAPPGQERGPQAA 276
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E + + + K + + + + +I
Sbjct: 277 DYTSFRLASDEDEAMRAPDGPPLRVVMKFNQSLRGLSVGAAVDFRGIVLGQVIDIGVDYD 336
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ +E + + ++ + E G + + +
Sbjct: 337 PQTRSFTMPVTVELYPDRLKRRTHGAPAPDLGSAESQQLLRHLVERGLRAQLRTGNLLTG 396
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS-NLNDSSQKFA 350
F + S R + + + +
Sbjct: 397 QLYVALDVFPKAAPVSFDATRDPLELPTIPNSLDALQTQVADIARKLERVPFDQIGANLN 456
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ + + A + A+ + R T + +D+
Sbjct: 457 NSLKNADRLFAQLST-EVMPQARDTLAAARQTFSSAEATLRQ--------DSPLQSDMHQ 507
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+++L T+ + + ER+P+ +V G+
Sbjct: 508 ALQELTRTLQSLNALADYLERHPESLVRGKTGD 540
>gi|170695537|ref|ZP_02886681.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
gi|170139524|gb|EDT07708.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
Length = 542
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/454 (9%), Positives = 111/454 (24%), Gaps = 53/454 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-IRIPGSVDG---------------- 51
+G V+ + Y + + +E + + P V G
Sbjct: 123 RIGASGVTGIGTLLSGAYIGVDAGRSKEARSEFVGLEAPPPVTGDQKGRRFTLHGDSLGS 182
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++ L LD++ + P Y
Sbjct: 183 IDIGSPIFYRRVQVGQVYALSLDKDGTG---VTMQVFVAAP------------------Y 221
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + T S + I + Q +
Sbjct: 222 DQYVGTNSRWWHASGVNVRLDSNGFVVNTQSLTSILIGGLSFRAPPGQTPG--PQAADYS 279
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + T + ++ + V +TD+ D
Sbjct: 280 SFHLASDEADAMRAPDTTPVRTVMKFNQSLRGLSVGAVVDFRGIVLGQVTDIGVDYDPKT 339
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + ++ + V ++ + + Q E G + + +
Sbjct: 340 RSFTMPVTLELYPDR---LRRRVHGTEVPKAGTVENQRLLQHLVERGLRGQLRTGNLLTG 396
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-NDSSQKFA 350
F + S R + + + +
Sbjct: 397 QLYVALDIFPKAAPVSFDPARDPLELPTIPNSLDALQTQVAEIAKKLERMPFDQIGTNLN 456
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ + + + A+ + + T + D+
Sbjct: 457 NSLKNADKLFTQLST-EIMPQARDTLAAAKQTFGSAEATLRQ--------DSPVQADMHQ 507
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+++L T+ + + ER+P+ +V G+ +
Sbjct: 508 ALQELTRTLQSLNALADYLERHPESLVRGKSEDK 541
>gi|225677451|ref|ZP_03788415.1| ABC transporter, periplasmic substrate-binding protein [Wolbachia
endosymbiont of Muscidifurax uniraptor]
gi|225590509|gb|EEH11772.1| ABC transporter, periplasmic substrate-binding protein [Wolbachia
endosymbiont of Muscidifurax uniraptor]
Length = 151
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + GLFV+ F F + + I + + +G+ SV
Sbjct: 1 MR-RSNILEITAGLFVLIFTIFLIFFAIDKLSYIKKNYKDCYKIYGLFANANGIGVGDSV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ +G+ VG I G+ LD+ + I D L ++A I + G+ G ++ +S
Sbjct: 60 KISGVDVGSITGVSLDKATY-VARIDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGS 118
Query: 119 KEKKTIFQIATE 130
K + E
Sbjct: 119 DIKLILHGGKIE 130
>gi|110680059|ref|YP_683066.1| mce-related protein, putative [Roseobacter denitrificans OCh 114]
gi|109456175|gb|ABG32380.1| mce-related protein, putative [Roseobacter denitrificans OCh 114]
Length = 148
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 7/135 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M VG +L + + + + + Y G + S++G++ S V
Sbjct: 1 MAEHTTEVLVGA---GVLAAAIGFVVYAGQISGYAGGASTYPLEASF-RSLEGVNVGSDV 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ +G + + L+ E + + + + I ++GL G ++E+
Sbjct: 57 RLAGVKIGTVSEVMLNAETYR-ADTTVSLNAGIEIPDDSAIIISSEGLLGGNFVEIVPGG 115
Query: 119 KEKKTIFQIATERNQ 133
E Q
Sbjct: 116 SPYFYAAGDQIEDTQ 130
>gi|281356105|ref|ZP_06242598.1| Mammalian cell entry related domain protein [Victivallis vadensis
ATCC BAA-548]
gi|281317474|gb|EFB01495.1| Mammalian cell entry related domain protein [Victivallis vadensis
ATCC BAA-548]
Length = 326
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 95/317 (29%), Gaps = 24/317 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +N +G+FV+ + + + + V SV GL+ S V++
Sbjct: 1 MNDRNQKLRIGMFVIGG-VLLLLIMLFFFGMSDFFTHKVAVRTYFSESVQGLTVGSGVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT---------------------PLYPSTTA 99
G+P+G + + + I+ D L
Sbjct: 60 RGVPIGTVSKIAIRV-SDKLVEVNMEIQLDHFVNVEGGRSRQLTEFDRFFRSELEQGMRC 118
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERN-QRAMITATPSGINYFISNAENTSKKI 158
+ G+ G+ YI+ + + + + I A PS + + +I
Sbjct: 119 RLEYAGITGMRYIDFDYFATPGQELPEPPAGTGPEVLYIPAVPSSFRDILKALNTSLDRI 178
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
S + + + + + +A + + +++ + +
Sbjct: 179 SRIRFEEISDGLERSLSELSGLLSDPALKSTIARINDAAENLETSSRTISRVLNEEQINR 238
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
++ L T L + + I S+ + ++D +N+ ++ T +
Sbjct: 239 IVSLLETDLKSVNELTTQLIRETRDSKIPESTASIRSAADSFVNSQDELSNTLLKLNQTL 298
Query: 279 QKIDHLLSDFSSKMKSK 295
+ L + S
Sbjct: 299 DSLRELTDYLNQDPSSL 315
>gi|183984024|ref|YP_001852315.1| MCE-family protein, Mce3C_1 [Mycobacterium marinum M]
gi|183177350|gb|ACC42460.1| MCE-family protein, Mce3C_1 [Mycobacterium marinum M]
Length = 438
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 82/302 (27%), Gaps = 15/302 (4%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+S VG ++I + + + GL+T V
Sbjct: 1 MKSFAERNQIVVGAVGLAITIGIVVGSLQYDKL-PFFQSGKQYSAYF-ADAGGLTTGVRV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ +G VG + + LD L K + L T A I+T+GL G +E+ +
Sbjct: 59 QVSGFRVGEVSSIELDGP---RVLVKFTVDKHIRLGDHTEAAIKTRGLLGTKMLEVISRG 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIE 173
+ Q ++ P + + S + + +
Sbjct: 116 DGQL---QGTIPLDRTRSPYQLPDALGDLATTISGLNTNQLSDSLRVLADTFSDTPPQLR 172
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ +T+ A + T V S+ + T+ + + +A
Sbjct: 173 VAIEGVARFSQTLDERDAQLRGLLTNANKATTVLAERSNQVVSLIANTNALLAELTTQRA 232
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
I Q ++ + + + +++ +
Sbjct: 233 ALDHISGNIAALGQQLHGLIAENEATMRPALDKLNGVLTILDNRKERLQKAIKLLDDYTM 292
Query: 294 SK 295
S
Sbjct: 293 SL 294
>gi|255530707|ref|YP_003091079.1| Mammalian cell entry related domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255343691|gb|ACU03017.1| Mammalian cell entry related domain protein [Pedobacter heparinus
DSM 2366]
Length = 328
Score = 83.1 bits (202), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/299 (10%), Positives = 79/299 (26%), Gaps = 2/299 (0%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+VG+F++ L ++ L + V + GL ++V F+G+ +G
Sbjct: 10 ITVGVFILLGLVIFVLGVFTLGSQRKAFVKSFTVNAVFSD-IQGLKAGNNVWFSGVKIGT 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I + ++ + A+I + GL G + +S + +
Sbjct: 69 IKKIQFYGISQVQVFMNIEEDAHKYIHKNAAASISSDGLIGNKIVVISGGNPKFPFVEDG 128
Query: 128 ATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ N + + ++++ + LT
Sbjct: 129 DQLQVASTLSTDDIMKTFQVNNKNLVDVTSDFKVLAQNLVEGKGAAGALLTDEQIAKNFK 188
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ V + ++ + L+T K Q
Sbjct: 189 AIVENLKTTTESANRMAAEMNTFTKTLNTKGGLTDKLMTDTAVFAKLQTAVNELQKTAES 248
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + + N + Q+ I ++ + + + + +
Sbjct: 249 ASAMTENLNKATSKFNQTDNAVGLLINDQQTADHIKGIMKNLETSSQKLDENMEALQHN 307
>gi|58698313|ref|ZP_00373230.1| ABC transporter, periplasmic substrate-binding protein, putative
[Wolbachia endosymbiont of Drosophila ananassae]
gi|225630958|ref|YP_002727749.1| ABC transporter, periplasmic substrate-binding protein [Wolbachia
sp. wRi]
gi|58535186|gb|EAL59268.1| ABC transporter, periplasmic substrate-binding protein, putative
[Wolbachia endosymbiont of Drosophila ananassae]
gi|225592939|gb|ACN95958.1| ABC transporter, periplasmic substrate-binding protein [Wolbachia
sp. wRi]
Length = 151
Score = 83.1 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + GLFV+ F F + + I + + +G+ SV
Sbjct: 1 MR-RSNILEITAGLFVLIFTIFLIFFAIDKLSYIKKNYKDCYKIYGLFANANGIGVGDSV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ +G+ VG I G+ LD+ + I D L ++A I + G+ G ++ +S
Sbjct: 60 KISGVDVGSITGVSLDKATY-VARIDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGS 118
Query: 119 KEKKTIFQIATE 130
K + E
Sbjct: 119 DIKLILHGGKIE 130
>gi|296160363|ref|ZP_06843180.1| Mammalian cell entry related domain protein [Burkholderia sp.
Ch1-1]
gi|295889344|gb|EFG69145.1| Mammalian cell entry related domain protein [Burkholderia sp.
Ch1-1]
Length = 320
Score = 83.1 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + N + +V GL TD++VR+
Sbjct: 1 MENKSHAFWAGLFT---IVLLAAIAVAAFLFNVDRSVRVPYDLIARTNVTGLYTDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D ++P L + L+ P+ ST ++ QG+ GI +I+L ++
Sbjct: 58 RGLDVGKVQSIKFDPDHPGQILIRILVDTHAPITHSTFGSLGFQGVTGIAFIQLDDNGRD 117
Query: 121 KKTIFQIA 128
+ A
Sbjct: 118 TSPLPSSA 125
>gi|284039748|ref|YP_003389678.1| hypothetical protein Slin_4901 [Spirosoma linguale DSM 74]
gi|283819041|gb|ADB40879.1| Mammalian cell entry related domain protein [Spirosoma linguale DSM
74]
Length = 328
Score = 83.1 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VGL V L +F +L S+ + +I ++DGL + VR NG+
Sbjct: 4 SKEVKVGLLAVVSLMMLYFGFRFLKGSDFFSSTHKYQVIY--SNIDGLVASNPVRINGLT 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VG++ + + QE N L ++ + T A + GL G
Sbjct: 62 VGQVKSIEILQEQQNKMLVTLELKKGIIVTQGTRAVLADDGLLGGK 107
>gi|124265233|ref|YP_001019237.1| paraquat-inducible protein [Methylibium petroleiphilum PM1]
gi|124258008|gb|ABM93002.1| paraquat-inducible protein [Methylibium petroleiphilum PM1]
Length = 569
Score = 83.1 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 34/400 (8%), Positives = 107/400 (26%), Gaps = 30/400 (7%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ + S V F + VG++ LD + + + +T +
Sbjct: 185 SADLGSVDIGSPVYFRRVQVGKVTATRLDADGRGVTLRVFISAPHEQHVTENTRFWHASG 244
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I E+ + + + H
Sbjct: 245 LDVALDAGGIKLQTQSLISIVLGGIAFGAP-----------------ESGAPGAAAEAEH 287
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ EN + T + + + ++ + + + +
Sbjct: 288 SFALFENQALAMKRTSSEVTPMVAHFTESLRGLAPGAQIDFRGVVVGEVTSIDVSYDRDR 347
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + + + + + +R +T + +
Sbjct: 348 REFSFPVGMVLYSDRLGSKVSAAIERAQVDPTELMRRSIERGLRAQLRTANLLTGQRYVA 407
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT--IENITSNL 342
L F K +A + + ++ ++ I I + I ++L
Sbjct: 408 LDFFPGARPVKTAAAPAAGSEAPVLEIPTISGSLEDLQATLTSIAKRIENVPFDEIAADL 467
Query: 343 NDSSQKFAELMSKINNISALKENN--SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ Q + + + + L + + A+ R T + + + S
Sbjct: 468 RTALQSLDRTLKNTDGLIGRLDGQLGELVPELKAAIADTRRTMKSADNLLASDTP----- 522
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++ +R++ + + +R P+ ++ G+
Sbjct: 523 ---TQQELREALREVSRAAQSMRELTDYVQRRPESLLRGK 559
Score = 52.2 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 35/106 (33%), Gaps = 4/106 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRP 89
+ + ++ S+ GL+ + + F G+ VG + + + + ++
Sbjct: 301 RTSSEVTPMVAHFTESLRGLAPGAQIDFRGVVVGEVTSIDVSYDRDRREFSFPVGMVLYS 360
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
D L +A I + + S R + + QR
Sbjct: 361 D-RLGSKVSAAIERAQVDPTELMRRSIERGLRAQLRTANLLTGQRY 405
Score = 40.3 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 12/95 (12%), Positives = 27/95 (28%), Gaps = 6/95 (6%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQ 75
IL + V I + L + +++ + +G + + L
Sbjct: 45 ILAALIGLTL---GVRAWLATGPTVTITFKT-AEDLEPGKTKIKYKNVDIGDVKSIALAP 100
Query: 76 EYPNHSL-AKALIRPDTPLYPSTTATIRTQGLAGI 109
+ + A+ L T + +AG
Sbjct: 101 DGKGVVVTAEMTQGAQKLLLDDTRFWVVRARVAGS 135
>gi|114771112|ref|ZP_01448552.1| hypothetical protein OM2255_03402 [alpha proteobacterium HTCC2255]
gi|114548394|gb|EAU51280.1| hypothetical protein OM2255_03402 [alpha proteobacterium HTCC2255]
Length = 147
Score = 83.1 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T+VG V+ F IY L+ +N D + S DG++ + VR
Sbjct: 1 MSNSKIETAVGGLVL--TLAIGFLIYLLNSTNVIDNKGGLNLKASFRSADGITAGTDVRM 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + G+ LD E + +R D + + + GL G +++E+ +
Sbjct: 59 AGVKIGTVTGMRLDPESYR-AEVLFSLREDLKIPDDSGVAVSQDGLLGGSFVEVIPGGSD 117
Query: 121 K 121
Sbjct: 118 F 118
>gi|126437561|ref|YP_001073252.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126237361|gb|ABO00762.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 463
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/305 (10%), Positives = 70/305 (22%), Gaps = 17/305 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S+ + VGL + ++ + + I S GL VR
Sbjct: 1 MKSRGRWMRVGLAALLVVTLAVGVYLV------WPSRTGNKITAYFTSAVGLYPGDEVRI 54
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG+I + E + + A + L +I+L+
Sbjct: 55 VGVPVGKIDSIDPRAED---VKVTMTLDHGVQVPADAKALMIAPNLVAARFIQLTPAYTG 111
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A R A P + S ++ +Q + T
Sbjct: 112 GPVMQDGAAIGLDRT---AVPVEWDEVKEQLTALSAQLGPQQGSMQGPLSAFVNQAADTF 168
Query: 181 ANIETISTVLANNISHIDKMMHTTQVT-----PHSSDSKNTFNTITDLITSLDKMIKAID 235
+S + ++ + N + + I + ++
Sbjct: 169 DGNGDSFRQALRELSQTAGRLGDSRTDLFGTVRNLQVLVNALSNSNEQIVQFSNHVASVS 228
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ D + L +
Sbjct: 229 QVLAESTADLDNTLGTLNQALVDVRDLLDESNDALIGQIGRLADFTQILTDHSEDIEQIL 288
Query: 296 ETSAF 300
+
Sbjct: 289 HVTPN 293
>gi|78355068|ref|YP_386517.1| organic solvents resistance ABC transporter periplasmic
protein-like protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78217473|gb|ABB36822.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component-like protein
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 313
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/293 (11%), Positives = 81/293 (27%), Gaps = 6/293 (2%)
Query: 1 MESKNYY----TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M + + GL + L I +++ + IR V LS
Sbjct: 1 MLDRKHTTKEMVRAGLTITLGLAVLGLFIVAFGG-HRFWEKLDTYHIRFLT-VKDLSVGR 58
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V++ GI +GR++ + +D+ P ++ D +Y T A+I +GL G Y+ LS
Sbjct: 59 PVKYAGINIGRVLDISVDKMDPGQVHVTIGVQQDFAVYQGTVASITQKGLVGDNYVLLSL 118
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + + + + + + S I N +
Sbjct: 119 KARPGQKLPVQSEIPADTSTSIFEAAASVGHLVQELHPKLVRIADSLDILLATINSQDMA 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + + ++ +
Sbjct: 179 GVTRNMNAVLHNAAQGIKTMTTEIQAVSGDARQGIREARNVMRTVQGSAHKADEALESTR 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + S + + + + +++ L+ S
Sbjct: 239 LAMEAVRMQTETLGGMLTALSGRFEENMEYDQAQVEEILRNTRELTENLNLLS 291
>gi|226364100|ref|YP_002781882.1| Mce family protein [Rhodococcus opacus B4]
gi|226242589|dbj|BAH52937.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 335
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 95/297 (31%), Gaps = 8/297 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+K + +FV+ F + + + + GL V+ G
Sbjct: 2 TKAPGIKLLIFVLVTSLTGFGVATVVGNMRFGSTNTYQAVFA---NASGLGNGEDVKVGG 58
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+P+G++ G+ L + ++ + + PL TTA I+ + L G Y+ELS
Sbjct: 59 VPMGKVKGVELAAD--GTAVVSFSLSTERPLTEGTTARIKYKNLIGDRYVELSNGPGAIG 116
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + + + + + S + +++ E + ++
Sbjct: 117 ALDGPIPLQQTTPALDLDQVVNGFRPLLQGLDPDQTNQLSASLIEVLNGQEASIGRLVSQ 176
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
I ++S LA+ I +++ + + + + D +
Sbjct: 177 IGSLSNTLADRDQAIGQVVSNFNTVVGTVNDRGDQFSTLIDQLQRLVAGLDGDRDLITNS 236
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
L NI +++ + + + ++ ++ + + + +
Sbjct: 237 LVNIDRVTDSLSSV---LDQNRPAIAQDVVALGDLAGNLNANTDTLNMVLSTLPENY 290
>gi|91781623|ref|YP_556829.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
xenovorans LB400]
gi|91685577|gb|ABE28777.1| ABC transporter, periplasmic ligand binding protein [Burkholderia
xenovorans LB400]
Length = 320
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ GLF + N + +V GL TD++VR+
Sbjct: 1 MENKSHAFWAGLFT---VVLLAAIAVAAFLFNVDRSVRVPYDLIARTNVTGLYTDAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D ++P L + L+ P+ ST ++ QG+ GI +I+L ++
Sbjct: 58 RGLDVGKVQSIKFDPDHPGQILIRILVDTHAPITHSTFGSLGFQGVTGIAFIQLDDNGRD 117
Query: 121 KKTIFQIA 128
+
Sbjct: 118 PSPLPSSD 125
>gi|118619247|ref|YP_907579.1| MCE-family protein Mce4F [Mycobacterium ulcerans Agy99]
gi|118571357|gb|ABL06108.1| MCE-family protein Mce4F [Mycobacterium ulcerans Agy99]
Length = 560
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M K + +F + +L + I++L + EV GL +++V
Sbjct: 1 MIDKLTKIQLSIFAIITVLTLTVMGIFYLRLPATFGIGTYEVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A+ + T + + TAT+++ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAQMRLNSGTAIPSNVTATVKSMSAIGEQY 108
>gi|118463303|ref|YP_881587.1| virulence factor Mce [Mycobacterium avium 104]
gi|118164590|gb|ABK65487.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 351
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 9/179 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + ++ LF++ L + + ++S G A V GL VR
Sbjct: 1 MRFRGPLIALTLFMIVSLTLT--WLVYVSLRRDVAGDTARYSAVFSD-VYGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + +++ + LY +T A++ Q + G Y+ LS ++
Sbjct: 58 AGVRVGRVEKIELDG---KLAKVSFVVQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEG 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + PS + N + + I T
Sbjct: 115 NP---AQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTKGIIASLQGDT 170
>gi|41407950|ref|NP_960786.1| hypothetical protein MAP1852 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396304|gb|AAS04169.1| hypothetical protein MAP_1852 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 351
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 9/179 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + ++ LF++ L + + ++S G A V GL VR
Sbjct: 1 MRFRGPLIALTLFMIVSLTLT--WLVYVSLRRDVAGDTARYSAVFSD-VYGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + +++ + LY +T A++ Q + G Y+ LS ++
Sbjct: 58 AGVRVGRVEKIELDG---KLAKVSFVVQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEG 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + PS + N + + I T
Sbjct: 115 NP---AQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTKGIIASLQGDT 170
>gi|330995965|ref|ZP_08319859.1| hypothetical protein HMPREF9442_00932 [Paraprevotella xylaniphila
YIT 11841]
gi|329573962|gb|EGG55540.1| hypothetical protein HMPREF9442_00932 [Paraprevotella xylaniphila
YIT 11841]
Length = 296
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 89/283 (31%), Gaps = 5/283 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +GL + F + +L N + + I + GL+ V
Sbjct: 1 MKYFTKEVKIGLTGAVAIAALFIGLNFLKGINLFKSSNSYYI--EFSDIKGLAKSGPVLA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG +G + + + + P H L + + + L T T+ T+ L G L ++
Sbjct: 59 NGYKIGTVRDILYNYQQPGHVLVEISVDENMCLPKGTKGTLVTEMLGGCNLNLLLGNPED 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAE---NTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + I + +T ++ + +E +
Sbjct: 119 GHYAPGDTIQGDDTKGLMDKAADIVPQVEQIMGKVDTLLTTLNTLAANPNLPNIMENAQS 178
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T E+ + + + K+ + + DL +L K+ +
Sbjct: 179 ITANLNESSRQLNGLLRNDMPKLTDKMNRIGDNVITLTDHMNELDLQATLSKVDTTLGYV 238
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
++ N + ++ + + + N + + ++
Sbjct: 239 QLMTEKMNRKDNTLGLLLNDSALYNNLTHTAGSANNLLIDLKE 281
>gi|169631228|ref|YP_001704877.1| MCE-family protein [Mycobacterium abscessus ATCC 19977]
gi|169243195|emb|CAM64223.1| Hypothetical MCE-family protein [Mycobacterium abscessus]
Length = 464
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 75/290 (25%), Gaps = 8/290 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + G F + + +YW+ + I+ S GL VR
Sbjct: 1 MTTSKTWLKRGAFAMLSVALVGGLLYWV-----WPSRGTYKIVGHFASAVGLYPGDDVRI 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ GRI + + + A I L +++L+ +
Sbjct: 56 LGVKAGRISAVEP---REGDVKVTMEMPDKFKVPEGAQAIIMAPNLVTARFVQLTPAYTD 112
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + A+ + + + ++ ++ S + I
Sbjct: 113 GKALQDGASLGLDKTAVPIEWDEVKTELAKLSDSLGPQGQSKGPVSDFINQAATTFDGNG 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ L+ + T + + ++ A + +
Sbjct: 173 DSFRNAVRELSQAAGRLGDSRTDLFGTIKNLQTLVDALANSNEQIVQFSTHLASVSKVLA 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
EN+ + ++ V + D + SD S
Sbjct: 233 ASTENLGATLGALNQALTDVRGFLGDTNSALIDQVNKLSDFVKIFSDQSD 282
>gi|169628104|ref|YP_001701753.1| putative MCE family protein [Mycobacterium abscessus ATCC 19977]
gi|169240071|emb|CAM61099.1| Putative MCE family protein [Mycobacterium abscessus]
Length = 352
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 5/127 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + L V + + + + + G V GL VR
Sbjct: 1 MKFRGP--LIALTVFMAVALALTWLVYATLRRDVAGGTTSYSAIFTD-VYGLRDGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L + +++ D LY +T A++ Q + G Y+ LS +
Sbjct: 58 AGVRVGRVEKIELVNN--KQAKVDFVVQNDQKLYGNTLASVTYQNIVGQRYLGLSLGKTG 115
Query: 121 KKTIFQI 127
+
Sbjct: 116 DTNVLAG 122
>gi|225874505|ref|YP_002755964.1| Mce family protein [Acidobacterium capsulatum ATCC 51196]
gi|225793931|gb|ACO34021.1| Mce family protein [Acidobacterium capsulatum ATCC 51196]
Length = 358
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/354 (11%), Positives = 115/354 (32%), Gaps = 18/354 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWL-SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
E + VG+ ++ L I+ + + + + S GL + V
Sbjct: 6 EVQWSQLKVGVLIIVALSALMALIFLMSGNTGGFFTGKIRLHSYFENSA-GLKVGAPVNL 64
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ +G + + + + P + + L+ + A++ T G+ G T +++
Sbjct: 65 DGVTIGNVKSIKIVTQPRLTPVEVFMSVSKKYQSQLHSDSKASLSTVGVLGDTIVDIDNR 124
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
I A N ++ + + + + I+ N+ +
Sbjct: 125 TATGGPIQNGAQ-------------LPTNETPNLQDVIQASQGTIQQLNVILGNVNALIN 171
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ TI ++++ + T++ ++ + TI L+ D
Sbjct: 172 QISSGQGTIGKLISDPSLFNNLNASVTKLNKVATQLNSGQGTIGKLLKDPSLYNHLNDTA 231
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ N +S + Q +++ ++ + +++ + +K
Sbjct: 232 TRIDDVANKIDTSQGTLGKLIQDPTLYNNLNQSVDKLNHLLTQVNSGQGALGMMVNNKAF 291
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L + ++ +A + Q K S N ++ + ++ N +
Sbjct: 292 ANKLNDTVTQLDSILQQANAGKGTVGQLIKNPSLYNHLDQVAASSNTLVTAIRK 345
>gi|223940092|ref|ZP_03631956.1| Mammalian cell entry related domain protein [bacterium Ellin514]
gi|223891277|gb|EEF57774.1| Mammalian cell entry related domain protein [bacterium Ellin514]
Length = 324
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/327 (14%), Positives = 107/327 (32%), Gaps = 17/327 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ +GLFV+ L ++ + + G V GL+ S V+
Sbjct: 1 MSARPNSYKIGLFVIIGLGVLIAGLFAFGARGYFQQQRV-FETYVTGEVQGLAVGSPVKL 59
Query: 61 NGIPVGRIVGLFLDQEYP-----NHSLAKALIRPDTPL--YPSTTAT--IRTQGLAGITY 111
G+ +G++ + ++ L + + +T L P I + G+
Sbjct: 60 RGVTIGKVTYIGFIWNEYPQYKIDYVLIRFEVPKETSLLPPPDMNFQTLIDREIARGLRA 119
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + + +Y+I +A ++ S + I +E
Sbjct: 120 RVQGQGITGSSIVALDYLDPKRNPPLQVPWTPKHYYIPSAPGQFTEVVASIQKILAKLEE 179
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + T+A +T+ + H+D+M T ++ +T L +L +
Sbjct: 180 LNL--SNTVARADTLMESADLLVKHVDRMDFVALGTNANALVAELRDTNVRLQATLKEAQ 237
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH-----DVRETTQTFQEVGQKIDHLLS 286
AI + + Q +++ TV + T + +E ++ L+S
Sbjct: 238 GAIKDTDLPAVGRRAQELEAKLTDLGNELQKTVAGLDTGSLNATLASAREAIAGLNDLMS 297
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRS 313
+ S S +
Sbjct: 298 KLKQQPSSLIFSKPPPPAKSVETPKAQ 324
>gi|284034021|ref|YP_003383952.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
gi|283813314|gb|ADB35153.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
Length = 344
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 51/161 (31%), Gaps = 5/161 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ + +FVV + + + P + V GL+ +R
Sbjct: 7 KTSFDSVRLAIFVVVTTIATALLAVTIGNIS--FTPTTKYKAVFTD-VVGLNQGDDIRIA 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG++ + L + ++ + L +T AT+R + L G YI L+
Sbjct: 64 GVRVGQVDKIALHDDT--LAMVTFSVESQQVLDTATRATLRYRNLVGNRYIALTEGVGGG 121
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
+ + + R S + +
Sbjct: 122 ERMKENDVIGQDRTAPALDLSVLFNGFKPLFTALTPADVNQ 162
>gi|315442437|ref|YP_004075316.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260740|gb|ADT97481.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 351
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 51/132 (38%), Gaps = 7/132 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VGL + + + + +++ GP V GL VR
Sbjct: 1 MKYRG--AMVGLSLFMVAALTLTWLVYVTLRRDVTGPTVPYSAVFTD-VFGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-K 119
G+ VGR+ + LD H+ +++ D + +T A++ Q + G Y+ LS
Sbjct: 58 AGVRVGRVESIELDG---KHAKVSFVVQSDQQVLGTTVASVTYQNIVGQRYLGLSLGNLG 114
Query: 120 EKKTIFQIATER 131
+ + +
Sbjct: 115 QPDPLPAGSVIP 126
>gi|254775056|ref|ZP_05216572.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 351
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 61/179 (34%), Gaps = 9/179 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + ++ LF++ L + + ++S G A V GL VR
Sbjct: 1 MRFRGPLIALTLFMIVSLTLT--WLVYVSLRRDVAGDTARYSAVFSD-VYGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + +++ + LY +T A++ Q + G Y+ LS ++
Sbjct: 58 AGVRVGRVEKIELDG---KLAKVSFVVQSEQRLYGNTLASVTYQNIVGQRYLGLSLGKEG 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + PS + N + + I T
Sbjct: 115 NP---AQLPPGSTIPLERTEPSFDVTTLLNGYEPLFSLLNPHDADNLTKGIIASLQGDT 170
>gi|169631640|ref|YP_001705289.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243607|emb|CAM64635.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 352
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 30/282 (10%), Positives = 80/282 (28%), Gaps = 10/282 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G ++++ ++ + + + L ++V + G+PV
Sbjct: 23 NKAWLGAIALAVIGALVGAMLLVKAIGL---GYSHYTGEFLQAAS-LQPGANVSYAGVPV 78
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + L + +R D L A+I+ + G Y+EL
Sbjct: 79 GNVTSVELAGD---RIEVGMRVRDDITLRKDARASIKITTILGNQYVELRNGGDGTLPNR 135
Query: 126 QIATERNQRAMITA---TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+I + + + +A+ ++ + ++ ++ + + + +
Sbjct: 136 RIDLAHTEVPYDLQATLQDATSTFEQVDADKIAESTAILAKQLEGLPAVLPQAMENIQTL 195
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
IS + + + +A + +
Sbjct: 196 SSVISHRRDQIGTLLSSTELVAGTLHRQQGDIGKLIVQGRDLLGEFVSRQASFHSMMRAV 255
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
E + V + VK V + DV+ + L
Sbjct: 256 TELVDVLNKIVVKDRGAVDKLIADVKTFSNLIGGHDDLFRSL 297
>gi|325675356|ref|ZP_08155040.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|325553327|gb|EGD23005.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 359
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 99/291 (34%), Gaps = 12/291 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T + +F + + + ++ S G E R V L+ VR G+
Sbjct: 10 APLTKLVIFALVTILATGALALTIANSGSRGG--TEFSARFTD-VTSLNKGDEVRIAGVR 66
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + + + + + L STTATIR + L G YI L ++
Sbjct: 67 VGQVTKIEIVDD--REAQVTFALTDRDWLPASTTATIRFRNLVGQRYIALEQGTGQQGFK 124
Query: 125 FQI--ATERNQRAMITATPSGINYFIS-----NAENTSKKISDSSRHIQKIIENIEKPLT 177
++ + N F +A++ +K + Q IE+ +
Sbjct: 125 MSAGETIPLDRTKPAVNLTTLFNGFRPLFQTLSADDVNKLSYQIIQVFQGEGGTIEELVA 184
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T + TI+ + + + + + T+ + S + + Q
Sbjct: 185 NTASLTNTIADKDKVIGDLVTNLNRVLETVNKRDEQVDQLIVNTERLVSGLSADRGVIGQ 244
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
V + E +++ V + + ++ + E +++ +L++
Sbjct: 245 SVQSLSELTSATADLLVPTRPSIQGSIAGLNTLAGHVNERSGEVNQVLANL 295
>gi|183984950|ref|YP_001853241.1| MCE-family protein Mce4F [Mycobacterium marinum M]
gi|183178276|gb|ACC43386.1| MCE-family protein Mce4F [Mycobacterium marinum M]
Length = 560
Score = 82.7 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M K + +F + +L + I++L + EV GL +++V
Sbjct: 1 MIDKLTKIQLSIFAIITVLTLTVMGIFYLRLPATFGIGTYEVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A+ + T + + TAT+++ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAQMRLNSGTAIPSNVTATVKSVSAIGEQY 108
>gi|312141007|ref|YP_004008343.1| mce family protein mce4b [Rhodococcus equi 103S]
gi|311890346|emb|CBH49664.1| putative Mce family protein Mce4B [Rhodococcus equi 103S]
Length = 352
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/291 (15%), Positives = 99/291 (34%), Gaps = 12/291 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T + +F + + + ++ S G E R V L+ VR G+
Sbjct: 3 APLTKLVIFALVTILATGALALTIANSGSRGG--TEFSARFTD-VTSLNKGDEVRIAGVR 59
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + + + + + L STTATIR + L G YI L ++
Sbjct: 60 VGQVTKIEIVDD--REAQVTFALTDRDWLPASTTATIRFRNLVGQRYIALEQGTGQQGFK 117
Query: 125 FQI--ATERNQRAMITATPSGINYFIS-----NAENTSKKISDSSRHIQKIIENIEKPLT 177
++ + N F +A++ +K + Q IE+ +
Sbjct: 118 MSAGETIPLDRTKPAVNLTTLFNGFRPLFQTLSADDVNKLSYQIIQVFQGEGGTIEELVA 177
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T + TI+ + + + + + T+ + S + + Q
Sbjct: 178 NTASLTNTIADKDKVIGDLVTNLNRVLETVNKRDEQVDQLIVNTERLVSGLSADRGVIGQ 237
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
V + E +++ V + + ++ + E +++ +L++
Sbjct: 238 SVQSLSELTSATADLLVPTRPSIQGSIAGLNTLAGHVNERSGEVNQVLANL 288
>gi|258541979|ref|YP_003187412.1| ABC transporter periplasmic protein [Acetobacter pasteurianus IFO
3283-01]
gi|256633057|dbj|BAH99032.1| ABC transporter substrate-binding periplasmic protein [Acetobacter
pasteurianus IFO 3283-01]
gi|256636114|dbj|BAI02083.1| ABC transporter substrate-binding periplasmic protein [Acetobacter
pasteurianus IFO 3283-03]
gi|256639169|dbj|BAI05131.1| ABC transporter substrate-binding periplasmic protein [Acetobacter
pasteurianus IFO 3283-07]
gi|256642223|dbj|BAI08178.1| ABC transporter substrate-binding periplasmic protein [Acetobacter
pasteurianus IFO 3283-22]
gi|256645278|dbj|BAI11226.1| ABC transporter substrate-binding periplasmic protein [Acetobacter
pasteurianus IFO 3283-26]
gi|256648333|dbj|BAI14274.1| ABC transporter substrate-binding periplasmic protein [Acetobacter
pasteurianus IFO 3283-32]
gi|256651386|dbj|BAI17320.1| ABC transporter substrate-binding periplasmic protein [Acetobacter
pasteurianus IFO 3283-01-42C]
gi|256654377|dbj|BAI20304.1| ABC transporter substrate-binding periplasmic protein [Acetobacter
pasteurianus IFO 3283-12]
Length = 316
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 83/279 (29%), Gaps = 6/279 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIPVGR 67
VG V+ L ++ + P A + + +P S V GL+ V+ G G
Sbjct: 22 WVGFLVLLSLVIFAGAVIEAGVLRDWLTPPARLRVVLPASGVGGLTVGGDVQLMGAHAGT 81
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I + L+ ++L + + ++A IR Q + + + +
Sbjct: 82 IRSIKLNPSGSMYALVDLDPQAKPFIRRDSSAIIRKQLIVTGAAYLDLSRGHGEPMDWSY 141
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE-NIEKPLTTTIANIETI 186
A A A AE S Q + T+ + T
Sbjct: 142 AVVSATPAPNPADQITATLNSIQAEIMPALASARHMMAQLDGTISDMHAGKGTVGQLMTN 201
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
++ + I + + + TD + K + + ++
Sbjct: 202 DQLIKQAEATIVSLNGVIDRLKPIENQISGIMNKTDATVANLKG----ASRDLKGATPHL 257
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ N S+ + + + T +++ ++ +
Sbjct: 258 PGIAANLDASTADLPALLAQAQTTLYGLEKLTDQLRGMW 296
>gi|84494802|ref|ZP_00993921.1| putative mce-related protein [Janibacter sp. HTCC2649]
gi|84384295|gb|EAQ00175.1| putative mce-related protein [Janibacter sp. HTCC2649]
Length = 423
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 49/135 (36%), Gaps = 5/135 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + F++ + S ++ + + G A S G+ S V
Sbjct: 1 MIRNFTKAQLAAFLLITIVGVSILSANYIGLTQRLLGGGASFSASFAQS-GGIFVGSEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VGR+ GL L+++ L +A + + + T A I + G Y++L
Sbjct: 60 YRGVKVGRVTGLELEKDG---VLVQAELDRGSEVPKDTLAVIENRSAVGEQYLDLQPRSF 116
Query: 120 EKKTIFQIATERNQR 134
+ T +
Sbjct: 117 GGPVLASGDTIPRKD 131
>gi|17545320|ref|NP_518722.1| hypothetical protein RSc0601 [Ralstonia solanacearum GMI1000]
gi|17427612|emb|CAD14131.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 547
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/398 (8%), Positives = 101/398 (25%), Gaps = 23/398 (5%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L T + V F + VG++ +D + I + P T + R
Sbjct: 172 NDLGSLDTGAPVYFRRVRVGQVTSYDIDADGKG---VTLHIFVNAPFDRFVTRSSRFWNA 228
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+GI ++ K + + + + + +
Sbjct: 229 SGIDLKLDASGLKVDMQSLLTVALGGIAFQSPEDADRDPAPQNTEFELVRNEAMALKDPE 288
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + ++ + + V I+ + + + +
Sbjct: 289 HVSQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSIGIHYSKERHEFVLPVTAVLYPTRF 348
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ N +++ + + + + F E +
Sbjct: 349 GMDVRDDTAAHATEDTRAQFDTLIRNGMRAQLKSASLLTGQQFVQLDFVEPADR------ 402
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
K+ E + + E E I +++ +
Sbjct: 403 -----GKTPPRFGLRERGGAYVFPTADNPTDDIEAQIAGIVKKLNKVPFEQIGQDVHRAL 457
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + ++ N L + + R T E +
Sbjct: 458 NSLDATLKQTEQLAKTVN-NDLAPQMKDTLAEARRTLETARQTFSEDAP--------LQR 508
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ ++ + ++ + + +R+P+ ++ G+ K +
Sbjct: 509 NARDTLEQVAKAAASVRVLTDYLDRHPEALIRGKAKDA 546
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 66/259 (25%), Gaps = 12/259 (4%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V++ S+ GL+ + V F GI VG I + + H
Sbjct: 291 SQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSIGIHYSKERHEFVL-----------PV 339
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN-YFISNAENTSK 156
TA + + + E RN + S + +
Sbjct: 340 TAVLYPTRFGMDVRDDTAAHATEDTRAQFDTLIRNGMRAQLKSASLLTGQQFVQLDFVEP 399
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + E + T N I + Q+ + N+
Sbjct: 400 ADRGKTPPRFGLRERGGAYVFPTADNPTDDIEAQIAGIVKKLNKVPFEQIGQDVHRALNS 459
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ L K + ++ L + + ++ + + R+T + +
Sbjct: 460 LDATLKQTEQLAKTVNNDLAPQMKDTLAEARRTLETARQTFSEDAPLQRNARDTLEQVAK 519
Query: 277 VGQKIDHLLSDFSSKMKSK 295
+ L ++
Sbjct: 520 AAASVRVLTDYLDRHPEAL 538
Score = 41.1 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 5/77 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + ++R G V S +G+ + V++ + +G + + L
Sbjct: 28 LVPIVALAVGATLMTRVILARGAQITVT---FSSAEGIEAGKTRVKYKSVDIGVVKSVGL 84
Query: 74 DQEYPNHSLAKALIRPD 90
+ + D
Sbjct: 85 TDDRSGAV-VLIELTRD 100
>gi|300777427|ref|ZP_07087285.1| ABC superfamily ATP binding cassette transporter, permease protein
[Chryseobacterium gleum ATCC 35910]
gi|300502937|gb|EFK34077.1| ABC superfamily ATP binding cassette transporter, permease protein
[Chryseobacterium gleum ATCC 35910]
Length = 332
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 82/294 (27%), Gaps = 7/294 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GLFV+S +++ + E+ R S +GL S+V F+G+
Sbjct: 4 NNIKLGLFVISGFILMMAVFFYIGSGSGIFTSKFELRARFKNS-NGLREGSNVLFSGMQA 62
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY----IELSTLRKEK 121
G + + L + + + A+I T+G+ G R +
Sbjct: 63 GSVKSVKLSGRDDIEVIMLIDKDIAKHIDNNAKASIGTEGIIGNAVVNILPYGRPGRPVQ 122
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + A + I T S N I + + K Q + +K +
Sbjct: 123 EKEYLTADTKPGVDEILNTLSASNNNIQDISKSLKNTVHKIDSSQILKLINDKAFAENLK 182
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL--DKMIKAIDLQKV 239
NI ++ + S
Sbjct: 183 LSILKIRQSTENIENLSSTAEAIITSTRQGKGATGLLLANKDFESQLKQTFNNVNAASNN 242
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ N + +++ + I T + + I++ L + +
Sbjct: 243 LNTVSNELIIVGKNLQAFSKNIENGKGPINALITDTVLTKNINNSLYNIEKGTE 296
>gi|167586169|ref|ZP_02378557.1| Mammalian cell entry related-protein [Burkholderia ubonensis Bu]
Length = 536
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 38/450 (8%), Positives = 109/450 (24%), Gaps = 54/450 (12%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-IRIPGSVDG---------------- 51
+G VS L Y + + + + P V G
Sbjct: 118 RIGATGVSGLGTLLSGAYIGVDAGRSQEGQTDFTGLETPPPVTGDQKGTQYVLRGASLGS 177
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S V + + VG++VG LD++ + + P Y
Sbjct: 178 VDIGSPVYYRRVQVGQVVGFALDKDGTG---VTVNVFVNAP------------------Y 216
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + T S + +
Sbjct: 217 DQYVGVNSRWWQASGVDLRLDSSGFKLNTQSLATVILGGIAFQAPP--GQGSGAAAPNNT 274
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + + ++ + V +T++ D
Sbjct: 275 VFHLGSDEADAMREPDGPPLQVVMNFNQSLRGLAVGAPVDFRGIVLGEVTNIGIDYDPKA 334
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
K + + R + E G + + +
Sbjct: 335 KNFTMPVTMNLYPERLGRRFR----ETIESKGEAARRGIVERLVERGLRGQLRTGNLLTS 390
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS-NLNDSSQKFA 350
F + R + + + + + + + +
Sbjct: 391 QLYVALDFFPKATTAKIDPSRQPLELPTVPNELEELQVVVADIAKKLGKVPFDQIGANLN 450
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
++ + + + + +A+ + + T + +D++
Sbjct: 451 STLANADRLFRQLDTQ-VAPEARDTLSAAKQTFSAAAATLQQ--------DSPLQSDVRG 501
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T+ + + ER+P+ ++ G+
Sbjct: 502 ALKELTRTLQSLNALSDYLERHPESLLKGK 531
>gi|162146608|ref|YP_001601067.1| paraquat-inducible protein B [Gluconacetobacter diazotrophicus
PAl 5]
gi|209543399|ref|YP_002275628.1| Mammalian cell entry related domain-containing protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|161785183|emb|CAP54729.1| Paraquat-inducible protein B [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531076|gb|ACI51013.1| Mammalian cell entry related domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 322
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 41/93 (44%), Gaps = 6/93 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K T+VG FV+ + ++ + N + + ++ GS GLS + V F
Sbjct: 1 MANK--ETAVGAFVIGGVALGMAALVFFGNFNIFSS-TKQAVVVFQGSTSGLSIGAPVTF 57
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPD 90
G+ VG + G+ + + + + ++P
Sbjct: 58 RGVRVGAVDGISITYDARTHGAYIPVTIEVQPG 90
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 33/203 (16%), Positives = 72/203 (35%), Gaps = 5/203 (2%)
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ +F +S V++ R T Q QK+ LS K + A
Sbjct: 121 QSFVTGQAEIDLDFDPASPAVLHPDIATRTEIPTRQSAIQKVQETLSQLPLKDLADNAQA 180
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
L++I R + R+ + ++ T ++D ++ + I+ +
Sbjct: 181 ALQSIRQLAE--RLDGDLPPLVDSVRETSDHSRAAVDTATRAIDDLQRRLDTTLGSIDTL 238
Query: 360 --SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+ ++ ++ D + DT + + + + + S +I + +R L
Sbjct: 239 ATTGTRQLDARGADLHVLLGNANDTVIQARQSLAGLRDMTSPRSAD-RANIDSTLRDLSA 297
Query: 418 TVNHFDDCLNNFERNPQDIVWGR 440
++ ERNPQ ++ GR
Sbjct: 298 AAAALRGFASDVERNPQLLLMGR 320
>gi|226304451|ref|YP_002764409.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183566|dbj|BAH31670.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 352
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 88/290 (30%), Gaps = 8/290 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+ + + + + + +G GL T V G+ V
Sbjct: 8 NPVQIGVIGLVLAVATVGAALQYDQLQFING-GIRYSAYF-QDAGGLVTGDDVTMAGVKV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + LD L ++ L T A I+T + G + +
Sbjct: 66 GKVSDVELD---DQKVLVTFTVQDGVALGEQTAADIKTNTVLGRKSLAVRPEGSGLLRTD 122
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + +E + +I+DS I + + L T + +
Sbjct: 123 TPIPVERTNSPYSLNDALGDLGTTVSELDTDQINDSLNAISDTLADTPPELRTALDGMTR 182
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S + + + +++ + ++ + + ++ +++++ N
Sbjct: 183 LSQSINSRDESLLQLLSRAEDVTKILSDRSGQIDSLLVDGNKLFAELSLRRDAISELIVN 242
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
S V + T + V + + + + +
Sbjct: 243 TGAVSRQLSAL---VQENEAQMGPTLEKLNSVAEVLQQNKDNIAGALDGL 289
>gi|313205510|ref|YP_004044167.1| mammalian cell entry related domain protein [Paludibacter
propionicigenes WB4]
gi|312444826|gb|ADQ81182.1| Mammalian cell entry related domain protein [Paludibacter
propionicigenes WB4]
Length = 303
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 40/127 (31%), Gaps = 2/127 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG+ + +F +F + +L + + ++ GL + V G
Sbjct: 7 TREVKVGIMAIVAIFVLYFGLNFLKGISIFTPVSYYYGSY--ENLGGLVPSTPVYVKGYK 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + D + K + D L + +G+ G ++L
Sbjct: 65 VGQVEKISYDFSKQKSFVIKISVSKDIKLPKGAKMELYDEGIMGGKAVQLVYAPITPTQA 124
Query: 125 FQIATER 131
+
Sbjct: 125 MYEPGDT 131
>gi|302551010|ref|ZP_07303352.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
gi|302468628|gb|EFL31721.1| secreted protein [Streptomyces viridochromogenes DSM 40736]
Length = 345
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 45/135 (33%), Gaps = 5/135 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ LF + + + + + P E V GL +R G
Sbjct: 9 TAAPLIKFSLFALVTMVATALLAATIVNLS--FTPEREYRAVFSD-VTGLEEGDDIRVAG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + G+ + + + + D PL ST A IR + L G Y+ L+ +
Sbjct: 66 VRVGEVEGIRI--KDRTLAEVSFTVSQDRPLLTSTGAVIRYRNLVGQRYVALTEGVGDGT 123
Query: 123 TIFQIATERNQRAMI 137
+ T R
Sbjct: 124 RLRPGGTIPLARTQP 138
>gi|163741339|ref|ZP_02148731.1| hypothetical protein RG210_17805 [Phaeobacter gallaeciensis 2.10]
gi|161385692|gb|EDQ10069.1| hypothetical protein RG210_17805 [Phaeobacter gallaeciensis 2.10]
Length = 150
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 49/133 (36%), Gaps = 3/133 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V++ + ++ G E+ S++G+S + VR
Sbjct: 1 MSHNTTEVLAGGLVLAAAIGFAVYAGQAAGLSR-AGSSYELNASF-RSLEGVSIGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + G+ L+ + + + ++ + + I ++GL G ++E+
Sbjct: 59 AGVKIGTVTGVDLNPQTFR-ADTRFSVKDGIEIPDDSAVVISSEGLLGGNFVEVMPGGSP 117
Query: 121 KKTIFQIATERNQ 133
A E Q
Sbjct: 118 FAFEAGDAVEDTQ 130
>gi|295701082|ref|YP_003608975.1| hypothetical protein BC1002_5539 [Burkholderia sp. CCGE1002]
gi|295440295|gb|ADG19464.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1002]
Length = 537
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/397 (7%), Positives = 86/397 (21%), Gaps = 38/397 (9%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L + V F I VG++ LD + D + T +
Sbjct: 177 LDVGTPVFFRRIQVGQVSSFHLDPDGRGVTVKVFVNAPYDRFVRTDTRFWHASGV----- 231
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + I + +
Sbjct: 232 ----------------------DMSFDSNGLRLETQSIVSIIIGGIAFESPPGSQVETSA 269
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + ++ + + + I ++ +
Sbjct: 270 DSGTRFELYPRRADAMEQHDRIVDKYVVNFTDSVRGLTVGAPVDFRGVVIGEVTAIYTRF 329
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + ++ D R E G + + +
Sbjct: 330 DSKTRHFSIPVEINLYPERFTSRYQNDGDGGRLAADPRALANFLVERGLRFQLRSGNPLT 389
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK-F 349
F + S ++ + S + + + + K
Sbjct: 390 GQLYLAVDFFPDAPKASIDWTKTPPEMPATPRTLQSLQDSVTRLLTKVNNIPFEDIGKDA 449
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ N + + A + + + T N + S +
Sbjct: 450 RSTLRTTNAMLGQLHTQ-VVPKAFDTLLSAQSTLNSANAALQP--------DSSLQQSTE 500
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ +R+L T + ++P+ +V G+ +
Sbjct: 501 DAMRELTRTAASLRTLADYLAQHPESLVRGKSEDKKP 537
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/242 (10%), Positives = 63/242 (26%), Gaps = 10/242 (4%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
++ SV GL+ + V F G+ +G + ++ + I + LYP +
Sbjct: 295 YVVNFTDSVRGLTVGAPVDFRGVVIGEVTAIYTRFDSKTR---HFSIPVEINLYPERFTS 351
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
G + ER R + + +
Sbjct: 352 RYQNDGDGGRLAADPR------ALANFLVERGLRFQLRSGNPLTGQLYLAVDFFPDAPKA 405
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + E P T + N + + + T ++++
Sbjct: 406 SIDWTKTPPEMPATPRTLQSLQDSVTRLLTKVNNIPFEDIGKDARSTLRTTNAMLGQLHT 465
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQ-VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ + D ++ A + + ++ T +R + +
Sbjct: 466 QVVPKAFDTLLSAQSTLNSANAALQPDSSLQQSTEDAMRELTRTAASLRTLADYLAQHPE 525
Query: 280 KI 281
+
Sbjct: 526 SL 527
>gi|259416373|ref|ZP_05740293.1| ABC transporter substrate binding protein [Silicibacter sp.
TrichCH4B]
gi|259347812|gb|EEW59589.1| ABC transporter substrate binding protein [Silicibacter sp.
TrichCH4B]
Length = 150
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V+++ F + ++ G + S++G+S + VR
Sbjct: 1 MTHSTTEVLTGGLVLAVAAGFAFYAAQAAGLSR-GGDSYPLSASF-RSLEGVSVGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + L+ E + + + + I ++GL G ++E+
Sbjct: 59 AGVKIGTVTNVALNAETFR-ADTTFSVDNSIMIPDDSAIVIASEGLLGGNFVEVMPGGSP 117
Query: 121 KK 122
Sbjct: 118 FN 119
>gi|187476647|ref|YP_784670.1| hypothetical protein BAV0132 [Bordetella avium 197N]
gi|115421233|emb|CAJ47738.1| putative exported protein [Bordetella avium 197N]
Length = 308
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 3/124 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++++ G+F + +L + W+ R I V GL+ S+VR+
Sbjct: 1 MENRSHALLAGVFTLVLLVAAALVAVWVGRDRTAFKF---YDIVSSTPVSGLTAQSAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ L L+ P + + P TP+ ST A I QG+ G IEL
Sbjct: 58 QGVPVGKVQSLVLNPHKPGEVRIRIGVAPTTPITASTWAEIGVQGVTGQANIELRDNGSS 117
Query: 121 KKTI 124
K+ +
Sbjct: 118 KELL 121
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 45/147 (30%), Gaps = 12/147 (8%)
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
N + + + + T+ I++ LN S+ A + K+ +
Sbjct: 146 NALMAKFEDTAEELRKLMSHSNVEALGVTLKNTAEISTQLNQVSRDLAPALRKVGPLVDS 205
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINR----------YIPSIGNNLQNFSQSGLNDIQNLV 412
+ DA + M + ++N + I +Q L + +
Sbjct: 206 LD--RASADAAQLMQAASQSLARLNAPDGPLANAGRSLQDIARAAARLNQDTLPAMTGMA 263
Query: 413 RKLQETVNHFDDCLNNFERNPQDIVWG 439
+ L N +PQ +++G
Sbjct: 264 NSVSGAARDAQTVLRNLGDSPQSLLFG 290
>gi|229494411|ref|ZP_04388174.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318773|gb|EEN84631.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 352
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 89/290 (30%), Gaps = 8/290 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+ + + + + + +G GL T V G+ V
Sbjct: 8 NPVQIGVIGLVLAVATVGAALQYDQLQFING-GIRYSAYF-QDAGGLVTGDDVTMAGVKV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + LD L ++ L T A I+T + G + +
Sbjct: 66 GKVSDVELD---DQKVLVTFTVQDGVALGEQTAADIKTNTVLGRKSLAVRPEGSGLLRTD 122
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + +E +++I+DS I + + L T + +
Sbjct: 123 TPIPVERTNSPYSLNDALGDLGTTVSELDTEQINDSLNAISDTLADTPPELRTALDGMTR 182
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S + + + +++ + ++ + + ++ +++++ N
Sbjct: 183 LSQSINSRDESLLQLLSRAEDVTKILSDRSGQIDSLLVDGNKLFAELSLRRDAISELIVN 242
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
S V + T + V + + + + +
Sbjct: 243 TGAVSRQLSAL---VQENEAQMGPTLEKLNSVAEVLQQNKDNIAGALDGL 289
>gi|253997970|ref|YP_003050033.1| Mammalian cell entry related domain-containing protein
[Methylovorus sp. SIP3-4]
gi|253984649|gb|ACT49506.1| Mammalian cell entry related domain protein [Methylovorus sp.
SIP3-4]
Length = 159
Score = 82.3 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 1/121 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME VG+F V+ F + + ++ GL + V+
Sbjct: 1 MERTTMDLWVGIFAVAGAAALFGLALKVGNLTSSSIGETYTVTAAFENIGGLKPRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +GR+ + D + + + P T A I T GL G Y+ L +
Sbjct: 61 AGVVIGRVDNIQFDSKTFE-ANVTLKLDKRYPFPKDTFANIYTAGLLGEQYVGLEAGGDD 119
Query: 121 K 121
+
Sbjct: 120 Q 120
>gi|126437563|ref|YP_001073254.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126237363|gb|ABO00764.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 344
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/308 (12%), Positives = 96/308 (31%), Gaps = 6/308 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +VG+F V +L + + G L VR
Sbjct: 1 MKRDGNLLNVGIFTVVMLLVAAALVVVFGEFRFASGNSYH--ANFTE-ASRLKAGQDVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG + + L+++ + LY ST A +R + L G Y+E+++ E
Sbjct: 58 AGVPVGTVKDVKLNEDNT--VDVAFDVSDKYQLYTSTRAVVRYENLVGDRYLEITSGPGE 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +T Q + + + +IE ++
Sbjct: 116 LRKLPPGSTIPKQNTQPALDLDALLGGLRPVLKGLDGAKVNEL-SSAVIELLQGQGGALS 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T + N + + + + D + + Q +
Sbjct: 175 NLLATTGSFSQNLAAREQLIGDVITNLNTVLGTVDEKGAQFDASVDRLQQLITGLAQGRD 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I I+ + ++ + + ++ + + + Q +D+ +D + ++ +
Sbjct: 235 PIAGAIEPLATAENDLTEMLEVSRRPLQGVIENARPLAQALDNRKADVNKVIEPLAENYL 294
Query: 301 LENIADST 308
N +
Sbjct: 295 RLNALGAY 302
>gi|57238857|ref|YP_179993.1| ABC transporter substrate-binding protein [Ehrlichia ruminantium
str. Welgevonden]
gi|58578786|ref|YP_196998.1| ABC transporter substrate binding protein [Ehrlichia ruminantium
str. Welgevonden]
gi|58616845|ref|YP_196044.1| ABC transporter substrate binding protein [Ehrlichia ruminantium
str. Gardel]
gi|15811186|gb|AAL08854.1|AF308677_3 hypothetical outer membrane protein [Ehrlichia ruminantium]
gi|57160936|emb|CAH57842.1| putative membrane protein [Ehrlichia ruminantium str. Welgevonden]
gi|58416457|emb|CAI27570.1| ABC transporter substrate binding protein [Ehrlichia ruminantium
str. Gardel]
gi|58417412|emb|CAI26616.1| ABC transporter substrate binding protein [Ehrlichia ruminantium
str. Welgevonden]
Length = 149
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 47/132 (35%), Gaps = 5/132 (3%)
Query: 4 KNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ +G V++ + V +VDGL V +
Sbjct: 3 RSNIIEIFIGFLVLAGAISIGIIAFNKLPYKNTLRNCYTVKA-FFSNVDGLDIGDEVTIS 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +G + + L++ Y + I+ + L ++A+I + G +I++ ++
Sbjct: 62 GVKIGTVTSISLNESYTP--IVTMCIQKNILLPSDSSASILNSNMLGKKHIDIELGSDQE 119
Query: 122 KTIFQIATERNQ 133
+ + E
Sbjct: 120 VIVSEGLIEHTH 131
>gi|169628103|ref|YP_001701752.1| putative MCE family protein [Mycobacterium abscessus ATCC 19977]
gi|169240070|emb|CAM61098.1| Putative MCE family protein [Mycobacterium abscessus]
Length = 348
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 96/284 (33%), Gaps = 10/284 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T +G ++++ + + + L + GIP+
Sbjct: 19 NKTWLGFIAIAVIGALVGGMLLVKAIGF---GYTTYTAEFAQAAS-LRAGQPITVAGIPM 74
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + L + H AK + D L T A IR + G Y++L ++
Sbjct: 75 GTVTSMKLVGD---HVEAKLSVSDDVKLGKDTKAAIRVTTILGSRYLDLQPEGP--GSLP 129
Query: 126 QIATERNQRAMITATPSGINYFISNAEN-TSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + + + K++ S + K ++ + + + + NI+
Sbjct: 130 NKTIDLAHTEVPYDLQATLRDATNTFDQVDFDKVAQSLSILGKQLDGLPEVVPQAMQNIQ 189
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
T+S ++A + ++ +++ ++ + + + +++
Sbjct: 190 TLSQIIAERRDQLGTLLKSSEKVTNTLRHQQQGIGTLINQGQNLIGEFVVRRGTFHAMMQ 249
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ K + + + ++ T ++ + D LL +
Sbjct: 250 SLTNLVQQLSKITIKDRPQLDEMLRTLHQLTDMLGQHDDLLRNI 293
>gi|305664731|ref|YP_003861018.1| virulence factor Mce family protein [Maribacter sp. HTCC2170]
gi|88707853|gb|EAR00092.1| virulence factor Mce family protein [Maribacter sp. HTCC2170]
Length = 326
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 41/121 (33%), Gaps = 1/121 (0%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G+FVV Y + G + + +GL ++VRF+GI VG
Sbjct: 9 LKLGVFVVFGTILLVTVAYLIGNRQNMFGQTFTISAVF-NNANGLQNGNNVRFSGINVGT 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + + + + + ATI + GL G + + I +
Sbjct: 68 VKAIDMVNDTTIRVSMIIEKKMLNHIRKDAIATIGSDGLVGSMILNIIPGEGSSPLIVEG 127
Query: 128 A 128
Sbjct: 128 D 128
>gi|307150967|ref|YP_003886351.1| Mammalian cell entry related domain-containing protein [Cyanothece
sp. PCC 7822]
gi|306981195|gb|ADN13076.1| Mammalian cell entry related domain protein [Cyanothece sp. PCC
7822]
Length = 485
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/410 (12%), Positives = 141/410 (34%), Gaps = 20/410 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR-PDT 91
+ G P + G++T + V + G+ VG+++ + + + I P
Sbjct: 42 SFGGRSYRATFLFP-NAGGMTTGTRVSYRGVRVGQVLNVTPEPTG---VAIQVEISPPSL 97
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ ++ GL G T I+++ L++ I +++ I
Sbjct: 98 LIPSNSLIEATQSGLVGETSIDITPLQELPGKIEANPLDKDCNPDIIICNGSRLSGQGKL 157
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ + S + + + A +++ + ++M+ T
Sbjct: 158 DVNALIRSLVRISDMISNPEVTSAIRSIAAKTSRALDNISSLSGNASQLMNQAIKTNTIP 217
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ +T T + + L + +L + V+ S Q+ +T+ +
Sbjct: 218 NLNSTLRTTGEAVNQLRRSGAIDNLSSTLE-ATGQAVNELRASGSLKQLNSTLTSTGKAA 276
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ + + LL D + + ++ L ++ T +R ++ + +I T
Sbjct: 277 EQLSILSNEASDLLQDVKNSNTINKLNSTLVSVGGVTEQLRIFLA------MNQDQIADT 330
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ +I + + + + ++ ++N +K ++ +A R+ S +N
Sbjct: 331 LASIRRTSEQMQATVKSLDPVLKEVNQGQLIKNLETISANAAELTLNLRNFSTNLND--- 387
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN--FERNPQDIVWG 439
+ Q L+ ++ +Q+ + D + F R+ ++ G
Sbjct: 388 ---PSTIVLLQQLLDSARSSFENIQKITSDLDQLTGDPQFRRDLMRMIQG 434
>gi|197118382|ref|YP_002138809.1| paraquat-inducible protein B [Geobacter bemidjiensis Bem]
gi|197087742|gb|ACH39013.1| paraquat-inducible protein B [Geobacter bemidjiensis Bem]
Length = 558
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/409 (8%), Positives = 117/409 (28%), Gaps = 27/409 (6%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATI 101
+ + L T S + F + VG++VG LD++ D + +T
Sbjct: 170 VLHSTDIGSLDTGSPIFFRRMQVGQVVGTELDRDGKGVTVKVFIRSPYDKFIKVNT---- 225
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
T+ + N +M++ GI++ + + +
Sbjct: 226 -----------YFWHASGIDLTLSASGVKVNTESMVSILLGGISFEAPEGKEDASPAPPN 274
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ ++ + + + ++ + + +
Sbjct: 275 TIFSLYPTKDDAAKHSAAVEKFVLVFKESVRGLAVGAPVDLRGVTVGEVTKINVALDRKG 334
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
T ++ D + + + H R ++ + ++
Sbjct: 335 SDFTVPVEIQFYPDQLLPKGNGQEKAPETGDRTLRRLLDDMVAHGFRAQIKSASLLTGQL 394
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
++ + S+ +++ + + I + +E I +
Sbjct: 395 ---YVALDFVPGARAAKINWGADPPRFPTVPGSMEKLQKNLTEIVQRIEKLP-LEQIAGD 450
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ + + + + + +L +A+ + R +++ + + +
Sbjct: 451 AGTTIRSLDSTLKSADQLLKNMD-RTLVPEARSVLAESRQAIDEVKKTLAEARQTFGGAN 509
Query: 402 QSGLND------IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
D +++ +R++ + E++P+ ++ G+++
Sbjct: 510 GVLAPDAPVQVDLRDTMREVSRAAQSLRVLGDYLEQHPEALIRGKKQEK 558
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN---HSLAKALIRPDTPLYPS 96
++ SV GL+ + V G+ VG + + + + + PD L
Sbjct: 296 FVLVFKESVRGLAVGAPVDLRGVTVGEVTKINVALDRKGSDFTVPVEIQFYPDQLLPKG 354
Score = 41.1 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 27/439 (6%), Positives = 107/439 (24%), Gaps = 16/439 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
++ I+ + + I + +GL + +++ + +G + +
Sbjct: 30 IIPIVAALIGLSIAVKAYIDRG----QAITITFKTGEGLEAGKTKLKYKDVMIGEVKSIA 85
Query: 73 LDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELST--LRKEKKTIFQIA 128
+ +H + A + D + T + ++G L+T +
Sbjct: 86 IS-NDRSHVVVTAEVTKDARGLMVKDTRFWVVRARISGGNVSGLNTLLGGSYIGVEAGSS 144
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
E ++ + TP ++ + + S I + +
Sbjct: 145 NEPHEEFIGLETPPAVSVDVPGRQFVLHSTDIGSLDTGSPIFFRRMQVGQVVGTELDRDG 204
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
I + + + + E +
Sbjct: 205 KGVTVKVFIRSPYDKFIKVNTYFWHASGIDLTLSASGVKVNTESMVSILLGGISFEAPEG 264
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + + + + + V + + + + T
Sbjct: 265 KEDASPAPPNTIFSLYPTKDDAAKHSAAVEKFVLVFKESVRGLAVGAPVDLRGVTVGEVT 324
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ ++ +I + + + + + + ++ + +
Sbjct: 325 K-INVALDRKGSDFTVPVEIQFYPDQLLPKGNGQEKAPETGDRTLRRLLDDMVAHGFRAQ 383
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
K A + + + + + +++ + + +
Sbjct: 384 IKSASLLTGQLYVALDFVPG-----ARAAKINWGADPPRFPTVPGSMEKLQKNLTEIVQR 438
Query: 429 FERNPQDIVWGREKGSVKI 447
E+ P + + G +++
Sbjct: 439 IEKLPLEQIAGDAGTTIRS 457
>gi|57864902|gb|AAW57076.1| conserved hypothetical protein [cyanobacterium endosymbiont of
Rhopalodia gibba]
Length = 467
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/428 (11%), Positives = 131/428 (30%), Gaps = 46/428 (10%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF + L + WL ++ V L + VR+ G+ VG+I
Sbjct: 9 VGLFALLGLVLFGGLVIWLRG-GVLGKKSYQIQATFKD-VSSLQIGAPVRYRGVAVGKIA 66
Query: 70 GLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
GL + D + ++T I GL G ++++ + +A
Sbjct: 67 GLQPRSNG---VKVLLELSSTDLRIPKNSTIQINRYGLIGEASVDITPSINLSE--QALA 121
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + E S+ + ++ +
Sbjct: 122 IDPTSAECLDKSLIICDSDEITGETGSQLVESLTKLSNAYSDP----------------- 164
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ + + L + + + + +I + +
Sbjct: 165 ------KFVKNLSDAFASVSVAGSKVAKLTDEISLFSKTARQEVGGTSEAIGKINQAAED 218
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+S + V +D+ + +D L+++ + + L ++ ++
Sbjct: 219 TSQLMRTVNTVVAENRNDLNRVINNMANLVANLDGLVAESR-----ENIISTLNSLEKAS 273
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+R+ + + +Q + I +I + I +L AE+ + ++S + +
Sbjct: 274 DQVRTVAIDLGKTVNQVNQGIDSI-NTQQIARDLEFLMANAAEMSENLRDVSKSISDPQV 332
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q+ + + R T E + + + +++ +N + ++
Sbjct: 333 ILTVQKTLDSARVTFENAQKITSDVEELTGD---------PTFRNNVRKLMNGLSNLVSF 383
Query: 429 FERNPQDI 436
+ Q +
Sbjct: 384 TNQFEQQL 391
>gi|308272472|emb|CBX29076.1| hypothetical protein N47_J00570 [uncultured Desulfobacterium sp.]
Length = 325
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/263 (16%), Positives = 89/263 (33%), Gaps = 2/263 (0%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+F +I W+ + Y SV GLS DS V+F G+ +GR+ + + +
Sbjct: 21 AFLAIIWVG-MSHYFEQGRLYSAYFNDSVQGLSKDSPVKFRGVTIGRVSEIAVAPDG-KL 78
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
I D + A +R+ G+ GI ++EL + + + + I
Sbjct: 79 IEVVLKIESDMKPDENIVAQLRSVGITGIMFVELDLKKNGESNLSPPLGFVPKHTAINTK 138
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
PS I F+ + + +I+ + + N I ++ ++K
Sbjct: 139 PSEITRFMDSISDVITQINKVDFEGLSVKTKATLDKINSAVNEAKIENFSSDIKESLEKW 198
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
++ TF TD S + +++ + N + +
Sbjct: 199 NTAITSVGDAAGVFKTFTLNTDNTVSNLNNAVTKIDAIITGNKDSVAQAIKNLNHAVENA 258
Query: 261 INTVHDVRETTQTFQEVGQKIDH 283
+ V D +E + + +
Sbjct: 259 ESLVIDGKEFIRNSDQNFSSMQQ 281
>gi|34498002|ref|NP_902217.1| paraquat-inducible protein B [Chromobacterium violaceum ATCC 12472]
gi|34103858|gb|AAQ60218.1| paraquat-inducible protein B [Chromobacterium violaceum ATCC 12472]
Length = 539
Score = 82.3 bits (200), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/409 (9%), Positives = 105/409 (25%), Gaps = 37/409 (9%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + ++ L+T S V F +PVG++VG LD + + I
Sbjct: 168 GQTFTLRA---DNLGSLNTGSPVYFRRVPVGQVVGYELDSKG-GYVKVAVFIN------- 216
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
Y + + + + +T S + +
Sbjct: 217 -------------APYDRFVSANSRFWHASGVDVSLSANGLNVSTQSLAAIALGGIAFET 263
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
++ + + + N + + + +
Sbjct: 264 PLADNAGIPLSDRNFILHDSRDRALQNPDREMQPFRLRFRQSLRGLSVGAPVDFRGITIG 323
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
I K + + + +R ++
Sbjct: 324 EVTAIGVQYVPERKDFDMTVDIRTYPSRLDSLSRGGRISGKLSPQALVANGMRAQLRSGN 383
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
+ ++ L F +K + S + + + ++ + +
Sbjct: 384 LITGQLYVALDFFRDAPPAKLVVRNGLPELPTISGDLEELQRVLQRIVKKLDAVPFDSIG 443
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
+ ++L Q + + ++ + + + T E + +
Sbjct: 444 KEADASLKSLHQTLDSVKKLSDGLNGDA-----VPQTLKTLEQLQQTLEATRQAM----- 493
Query: 396 NLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
D++ ++++ET F + +R+P+ +V G+E
Sbjct: 494 ---RADSPLQQDVRAAAQEVKETARSFRALADYLDRHPEALVRGKEAQP 539
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/248 (11%), Positives = 69/248 (27%), Gaps = 9/248 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D M +R S+ GLS + V F GI +G + + + + D Y
Sbjct: 292 DREMQPFRLRFRQSLRGLSVGAPVDFRGITIGEVTAIGVQYVPERK---DFDMTVDIRTY 348
Query: 95 PSTTATIRTQG-LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
PS ++ G ++G + + + Q + N
Sbjct: 349 PSRLDSLSRGGRISGKLSPQALVANGMRAQLRSGNLITGQLYVALDFFRDAPPAKLVVRN 408
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
++ S ++++ +++ + A A+ + +
Sbjct: 409 GLPELPTISGDLEELQRVLQRIVKKLDAVPFDSIGKEADASLKSLHQTLDSVKKLSDGLN 468
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ + L + L+ Q + + ++ +V T R
Sbjct: 469 GDAVPQTLKTLEQLQQ-----TLEATRQAMRADSPLQQDVRAAAQEVKETARSFRALADY 523
Query: 274 FQEVGQKI 281
+ +
Sbjct: 524 LDRHPEAL 531
>gi|15607730|ref|NP_215104.1| MCE-family protein MCE2B [Mycobacterium tuberculosis H37Rv]
gi|148660359|ref|YP_001281882.1| MCE-family protein Mce2B [Mycobacterium tuberculosis H37Ra]
gi|148821792|ref|YP_001286546.1| MCE-family protein mce2B [Mycobacterium tuberculosis F11]
gi|167969013|ref|ZP_02551290.1| virulence factor mce family protein [Mycobacterium tuberculosis
H37Ra]
gi|218752230|ref|ZP_03531026.1| MCE-family protein mce2B [Mycobacterium tuberculosis GM 1503]
gi|253797524|ref|YP_003030525.1| MCE-family protein mce2B [Mycobacterium tuberculosis KZN 1435]
gi|254549545|ref|ZP_05139992.1| MCE-family protein mce2B [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289552843|ref|ZP_06442053.1| MCE-family protein mce2B [Mycobacterium tuberculosis KZN 605]
gi|289760709|ref|ZP_06520087.1| MCE-family protein mce2B [Mycobacterium tuberculosis GM 1503]
gi|297633084|ref|ZP_06950864.1| MCE-family protein mce2B [Mycobacterium tuberculosis KZN 4207]
gi|297730062|ref|ZP_06959180.1| MCE-family protein mce2B [Mycobacterium tuberculosis KZN R506]
gi|306774694|ref|ZP_07413031.1| MCE-family protein mce2B [Mycobacterium tuberculosis SUMu001]
gi|306802197|ref|ZP_07438865.1| MCE-family protein mce2B [Mycobacterium tuberculosis SUMu008]
gi|313657389|ref|ZP_07814269.1| MCE-family protein mce2B [Mycobacterium tuberculosis KZN V2475]
gi|2222768|emb|CAB09962.1| MCE-FAMILY PROTEIN MCE2B [Mycobacterium tuberculosis H37Rv]
gi|148504511|gb|ABQ72320.1| MCE-family protein Mce2B [Mycobacterium tuberculosis H37Ra]
gi|148720319|gb|ABR04944.1| MCE-family protein mce2B [Mycobacterium tuberculosis F11]
gi|253319027|gb|ACT23630.1| MCE-family protein mce2B [Mycobacterium tuberculosis KZN 1435]
gi|289437475|gb|EFD19968.1| MCE-family protein mce2B [Mycobacterium tuberculosis KZN 605]
gi|289708215|gb|EFD72231.1| MCE-family protein mce2B [Mycobacterium tuberculosis GM 1503]
gi|308216593|gb|EFO75992.1| MCE-family protein mce2B [Mycobacterium tuberculosis SUMu001]
gi|308351000|gb|EFP39851.1| MCE-family protein mce2B [Mycobacterium tuberculosis SUMu008]
gi|328457307|gb|AEB02730.1| MCE-family protein mce2B [Mycobacterium tuberculosis KZN 4207]
Length = 275
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 4/136 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ +G+ + + F+ I + V GL VR
Sbjct: 1 MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVR--FHHTTGYSAVFTH-VSGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L + L + L +TTA+IR L G Y+EL
Sbjct: 58 AGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTASIRYLNLIGDRYLELGRGHSG 116
Query: 121 KKTIFQIATERNQRAM 136
++
Sbjct: 117 QRLAPGATIPLEHTHP 132
>gi|325955062|ref|YP_004238722.1| hypothetical protein Weevi_1443 [Weeksella virosa DSM 16922]
gi|323437680|gb|ADX68144.1| Mammalian cell entry related domain protein [Weeksella virosa DSM
16922]
Length = 318
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/307 (11%), Positives = 92/307 (29%), Gaps = 12/307 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ +G+ ++ + FF +L + + +V+GL V NG+
Sbjct: 4 SNEVKIGIVSLATVIGFFFLYNFLRGTKVFSTGRTFYAKY--ENVNGLQVTKPVSINGLT 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + + P + + I D +T A I + GL + + + +
Sbjct: 62 VGKVDKIEIVDGKPLTFIVEFTINKDIKFSKNTIAQIYSPGLMQSS--------EMQLIL 113
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ SG + + + + + + N
Sbjct: 114 DYDGEIAEDGDFLRGGVSGGLLGDIGGQ--IEPTQQKLDTVLITMNRTLSAIERLLDNDN 171
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + + SS S I D ++ + + + +
Sbjct: 172 QNNIKILIENLNRTVGSFNETARSFSSTSAYANELIKDNQKIINSTLNNANSMLASAKIS 231
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ ++ Q+ T+++ + +E+ +I+ S + + L
Sbjct: 232 ADKFGQTADKLNNLQLEKTLNNFEAASVNLKELMTRIERGDGTLGSLLNDRTMYNNLNEA 291
Query: 305 ADSTSNM 311
+ +++
Sbjct: 292 TKNLNDL 298
>gi|187478579|ref|YP_786603.1| paraquat-inducible protein B [Bordetella avium 197N]
gi|115423165|emb|CAJ49696.1| putative paraquat-inducible protein B [Bordetella avium 197N]
Length = 555
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/429 (12%), Positives = 119/429 (27%), Gaps = 34/429 (7%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+FF + +YD P +R ++ L S V + I VGR++ L + +
Sbjct: 155 AFFVGLETPPAVEYDRPGKRFTLR-AENLGSLDIGSPVYYRRINVGRVIAYALSDDGKSV 213
Query: 81 -SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
D + + + L + ++ A
Sbjct: 214 DVQVFIDAPNDRFVTEGARFWNASGVDFSLDASGLKVRTQSMVSLLLGGVAFENVVRRDA 273
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
P+ + Q N + + LA +
Sbjct: 274 EPAKADSRFKL-----------YGGEQAAKVNTDGTPFHIRMRFDQSVRGLAVGAPIDFQ 322
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
+ VT + D L+ + + L + + S
Sbjct: 323 GITLGDVTNVAIDFDAKNKRFFGLVDATIYPERLGGLFDEIVKGLERDTGTRDLAPSRTL 382
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + +R ++ + ++ +L FS K I I
Sbjct: 383 AVLVEYGLRAQLRSSNLLTGQMYIVLDHFSKVPPVKYVQTDPATIPTIPGQFDQLQDQIG 442
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTF 379
I + +KI + I +L + ++LM +++ A D +
Sbjct: 443 SIVSKIEKI-----PFDQIGQDLRLTLANTSKLMERLDKTVA--------PDTAAVLKEA 489
Query: 380 RDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
R + ++N + N + +R++ + + + + NP+ ++ G
Sbjct: 490 RRSLAQLNELFSPDASLPINA--------ERSMREMSQAARALRNLADYLQANPEALLRG 541
Query: 440 REKGSVKIY 448
R K + +
Sbjct: 542 RGKDPIPGF 550
Score = 40.3 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 34/91 (37%), Gaps = 8/91 (8%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ ++ + + L + + + ++ I + +GL + +R+
Sbjct: 20 KERSRISWIWLVPLVAALAGLSLVV-----RTWMQAGPDITIEF-NTAEGLEVGKTQLRY 73
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ VG + G+ + + + L KA + +
Sbjct: 74 KDVVVGTVTGIHFNTDR-SKVLVKAELVKEV 103
>gi|56551822|ref|YP_162661.1| mammalian cell entry related domain-containing protein [Zymomonas
mobilis subsp. mobilis ZM4]
gi|241761854|ref|ZP_04759940.1| Mammalian cell entry related domain protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
gi|56543396|gb|AAV89550.1| Mammalian cell entry related domain protein [Zymomonas mobilis
subsp. mobilis ZM4]
gi|241373768|gb|EER63328.1| Mammalian cell entry related domain protein [Zymomonas mobilis
subsp. mobilis ATCC 10988]
Length = 169
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 3/127 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
GLF+V + W V P + G+++ + VR G+ +G
Sbjct: 11 EALTGLFIVLATIGFAYYA-WNKTGGGVTAHAVHVKALFP-NAGGINSGTEVRVAGVKIG 68
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ LD + + + P+ PL ++A I + GL +YI L +K
Sbjct: 69 SVLDEQLDPQSY-QVMVNLALDPNIPLPLDSSAAITSDGLMSGSYIALIPGGSDKHLKEG 127
Query: 127 IATERNQ 133
Q
Sbjct: 128 DTIIDTQ 134
>gi|167645295|ref|YP_001682958.1| hypothetical protein Caul_1330 [Caulobacter sp. K31]
gi|167347725|gb|ABZ70460.1| Mammalian cell entry related domain protein [Caulobacter sp. K31]
Length = 168
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/133 (20%), Positives = 53/133 (39%), Gaps = 3/133 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T++G+ V+++ + + G E+ + G L+ +SV
Sbjct: 1 MREQWAETAMGVVVLALTAGFLTYSLSVGGVHSKSGN-YEISAKF-GEAGSLAPGASVTV 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + L+ + ++AK I P L +TA I + GL G ++ ++
Sbjct: 59 AGVKVGTVSKVVLEPKTY-LAVAKLSIDPTVKLPADSTAKITSDGLLGGAHVAIAPGASL 117
Query: 121 KKTIFQIATERNQ 133
E Q
Sbjct: 118 DDLKPGGEIENTQ 130
>gi|90408208|ref|ZP_01216375.1| putative ABC superfamily transport protein [Psychromonas sp. CNPT3]
gi|90310654|gb|EAS38772.1| putative ABC superfamily transport protein [Psychromonas sp. CNPT3]
Length = 161
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 46/120 (38%), Gaps = 4/120 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVRF 60
K VG FV++ L + ++ + G + ++ GL S V+
Sbjct: 7 SEKRIEFWVGCFVIASLIAFALLAFNIAGISLKGQGKSYTLYASFT-NIGGLKERSPVKL 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST-TATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + + Y T + +I T GL G Y+ ++
Sbjct: 66 GGVVVGRVEEISLDVQNYMP-RVRLSMYAQKGYYSDTSSLSILTSGLLGEQYLSITPGFM 124
>gi|83593782|ref|YP_427534.1| hypothetical protein Rru_A2447 [Rhodospirillum rubrum ATCC 11170]
gi|83576696|gb|ABC23247.1| Mammalian cell entry related [Rhodospirillum rubrum ATCC 11170]
Length = 323
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F++ L +I + EV++ SV GL + V F+G+P
Sbjct: 3 AKPAVVGGFILGALALGVAAIVLFGG-QRLFTSTREVVVFFNESVAGLQVGAPVTFHGVP 61
Query: 65 VGRIVGLFL---DQEYPNHSLAKALIRPDTPLYPS 96
VG + + L ++ ++PD +
Sbjct: 62 VGTVKTIALRVSTRDLSARIPVVLELQPDQISWEG 96
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 56/176 (31%), Gaps = 4/176 (2%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE-ITDQRQKII 329
V +D L + + +A+ + S + I T Q +
Sbjct: 149 LPEIPAVASDLDELRDKVTELPLRDLVETAQKTLANVQALTSSLNTRIPTLTTSAEQSVA 208
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISAL--KENNSLFKDAQRAMHTFRDTSEKIN 387
T+ + + + +++++ A ++ ++ + + + T+ +
Sbjct: 209 VATQTLVTTQEAVRQIQADASVTLKELSDLLADLHRQVDARGGELGKTLSAAERTARQAE 268
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ S+ L D++ R L + + ER+P ++ G K
Sbjct: 269 SLMISLNE-LAGPRARFRADLEAAARDLSASASSTRSFTRTLERDPSALLSGDTKR 323
>gi|150010524|ref|YP_001305267.1| hypothetical protein BDI_3971 [Parabacteroides distasonis ATCC
8503]
gi|255016565|ref|ZP_05288691.1| hypothetical protein B2_21871 [Bacteroides sp. 2_1_7]
gi|256842197|ref|ZP_05547701.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262384876|ref|ZP_06078008.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298377644|ref|ZP_06987595.1| hypothetical protein HMPREF0104_03833 [Bacteroides sp. 3_1_19]
gi|301308942|ref|ZP_07214887.1| mce related protein [Bacteroides sp. 20_3]
gi|149938948|gb|ABR45645.1| conserved hypothetical protein [Parabacteroides distasonis ATCC
8503]
gi|256736081|gb|EEU49411.1| conserved hypothetical protein [Parabacteroides sp. D13]
gi|262293592|gb|EEY81528.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
gi|298265347|gb|EFI07009.1| hypothetical protein HMPREF0104_03833 [Bacteroides sp. 3_1_19]
gi|300832968|gb|EFK63593.1| mce related protein [Bacteroides sp. 20_3]
Length = 294
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 94/287 (32%), Gaps = 8/287 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL + L + I +L N P+ + +V G++ S V +G VG
Sbjct: 8 EAKIGLVTIVSLALLYLGINYLKGIN-LFQPVNHYYVSFS-NVKGVTISSPVFVDGFKVG 65
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D + + + + L + + L+G +
Sbjct: 66 LVRDIIYDYDTTGKIIVEVSLEDKMRLNKGSYIAVVNTFLSGAELHIHLNTYVDDFLKPG 125
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
E R S + + EN KI +Q +I + + N
Sbjct: 126 STLE--GRMEEDMMQSVQEKILPSVENLLPKIDTILGSLQTLIAHPALAQS---LNHIEK 180
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+T + M + V ++ K + +++ +L ++ A + +N L N+
Sbjct: 181 TTSNLEVSTRQLNQMLSKDVPGIVNNLKTMTDNFSEVSANLKELDLATTVNSINATLANL 240
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+++++ + + + ++D + LL D K
Sbjct: 241 KLTTDKLNSTDNSIGLLLND-KGLYDNLNSTMDNASKLLLDLRENPK 286
>gi|332168813|gb|AEE18068.1| Mammalian cell entry related domain protein [Krokinobacter
diaphorus 4H-3-7-5]
Length = 314
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 105/298 (35%), Gaps = 6/298 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + V++ L F +L +N D +V+GL+ S V NG+P
Sbjct: 2 SKEIKTAILVIAALLLVIFGYNYLKGNNLLDKSKILYAKY--DNVEGLAPSSQVTINGLP 59
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VGR++ + + + K ++ D ++ A + GL G + + ++ +
Sbjct: 60 VGRVMSIDFA-DSSGKLVVKFVVEKDFEFSNNSLARVYGGGLIGGKSLAIIPSYEKGRNA 118
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
T + M +N ++ +N +K+ + + + ++ T
Sbjct: 119 KTGDTLPGE--MGEGIMELVNERLTPLQNQVEKVIGDTDSLLVNVNSVLDRDTRANLRDA 176
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ A+ + + T + + + + ++ ++ Q++
Sbjct: 177 IANFTDASREMKGISKSVNGLLASNQDKLDRTITNLDKMSGNFATLSDSLSKIQMGQMVA 236
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+++ + +F + S+++ N+ ++ +D + ++ + +
Sbjct: 237 DLEKTIADFQELSNKL-NSPEGTVGKLLNDDQLYLNLDRTANQMGDLLQDMKLNPKRY 293
>gi|254460345|ref|ZP_05073761.1| toluene transport system Ttg2C protein [Rhodobacterales bacterium
HTCC2083]
gi|206676934|gb|EDZ41421.1| toluene transport system Ttg2C protein [Rhodobacteraceae bacterium
HTCC2083]
Length = 148
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 47/133 (35%), Gaps = 3/133 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG V+++ ++ G + S++G+S + VR
Sbjct: 1 MTQNSTEIVVGGLVLAVAVGFLAYAAQVTGVQSSAG-SYPLTASF-RSLEGVSVGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + L+ E ++ + + TI ++GL G ++E+
Sbjct: 59 AGVKIGSVNSVDLNTETFRADTV-ISVKDGIEIPDDSAITIASEGLLGGNFVEIVPGGSP 117
Query: 121 KKTIFQIATERNQ 133
E Q
Sbjct: 118 FMFEPSSEIEDTQ 130
>gi|297191133|ref|ZP_06908531.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297150775|gb|EDY65652.2| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 424
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 44/132 (33%), Gaps = 4/132 (3%)
Query: 1 MESKNYYT-SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ V V+ + S+ + + V S G+ + V
Sbjct: 1 MITRTVRAQLVAFAAVTAVGCSYVGARYTGLVDGLLDRGYTVRADFADS-GGIFQGAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+PVGR+ L L I T + T A + + G Y++L R
Sbjct: 60 YRGVPVGRVGELRLAGTDG--VSVALDIEDGTRIPADTLAVVANRSAVGEQYVDLQPRRA 117
Query: 120 EKKTIFQIATER 131
+ + + +
Sbjct: 118 DGPYLDEGSEIP 129
>gi|256424260|ref|YP_003124913.1| hypothetical protein Cpin_5281 [Chitinophaga pinensis DSM 2588]
gi|256039168|gb|ACU62712.1| Mammalian cell entry related domain protein [Chitinophaga pinensis
DSM 2588]
Length = 340
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/341 (11%), Positives = 95/341 (27%), Gaps = 5/341 (1%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ + VG+F+ L + L + V + G+ T +++
Sbjct: 1 MKETSNRRAVIVGIFITLGLLIVIAGVLTLGGQKKAFVSAIHVSATFSD-IGGVQTGNNI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
++G+ VG + + + + ++ A + + GL G I LS
Sbjct: 60 WYSGVKVGTVKKITFIEHNKIRVDLNIEEKSAQFIHKDVLAKVGSDGLVGNKIIALSGGS 119
Query: 119 KEKKTIFQIATERNQRAMITA--TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ I + + + T + S R + +
Sbjct: 120 ENVPAIQDGDQLKVAVNISPDEIMTTLQENNKKLLLITGDLSTLSKRIVNGEGSVGKLMT 179
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
++ N + + + + + SS K T + + +
Sbjct: 180 DESLYNNLSQTVATFEKAAANTERLTQGLADYASSLRKKGSLTNDLVTDTTVFNNLRAAV 239
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
++ + N V N ++ + + ++D + Q + L + S
Sbjct: 240 AQMKDVAGNANVVVENLKSTTRSLNDNLNDAKSPVGVLLNDQQSGEDLRQTLRNLNVSTA 299
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
A +R + ++ +K +
Sbjct: 300 KLDEDLEAAQHNFLLRGFFKKKAKREEKARKDSIKNAQKQQ 340
>gi|182416427|ref|YP_001821493.1| hypothetical protein Oter_4623 [Opitutus terrae PB90-1]
gi|177843641|gb|ACB77893.1| Mammalian cell entry related domain protein [Opitutus terrae
PB90-1]
Length = 334
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 4/93 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K T VG FV+ ++ + + P ++ S+ GL S V+
Sbjct: 1 MKTKLRPTIVGAFVIGAFVLGLIAMLAFGGVSFFSKP-QRFVVFFDESIHGLDLGSPVKL 59
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPD 90
G+ +GR+ GL + + + + D
Sbjct: 60 RGVRIGRVAGLNVRYDEATNRSLVAVVCELNRD 92
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/201 (9%), Positives = 65/201 (32%), Gaps = 4/201 (1%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++ + + V + +Q +I + + S E
Sbjct: 135 ELNFVDAHEYPAQATAFEARYVVVPTMPSALSEYQANLTEILNDMRRIDFAGISTEFKGL 194
Query: 301 LENIADSTSNMRSSISAIR-EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
L + + + + + + T + + ++ + + +N N + +++K++
Sbjct: 195 LVDTRKQLTGVDLKGAVAQWQKTGAQFEALAAMPEFKTTLANANQAITDLRGVLAKVDQ- 253
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
+++ ++ + + E N + + G ++ + ++
Sbjct: 254 -QVEQIGPASQELTATLAQAKAALETFNHTAQTAQRFIAAQGGLG-DEASRALEQITSAA 311
Query: 420 NHFDDCLNNFERNPQDIVWGR 440
+ ERNPQ ++ G+
Sbjct: 312 EAVQRLADFLERNPQALISGK 332
>gi|28898138|ref|NP_797743.1| ABC transporter periplasmic substrate-binding protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|153836512|ref|ZP_01989179.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus AQ3810]
gi|260366437|ref|ZP_05778876.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus K5030]
gi|260878483|ref|ZP_05890838.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus AN-5034]
gi|260897064|ref|ZP_05905560.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus Peru-466]
gi|260901860|ref|ZP_05910255.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus AQ4037]
gi|28806352|dbj|BAC59627.1| possible ABC transport system periplasmic substrate-binding protein
[Vibrio parahaemolyticus RIMD 2210633]
gi|149750110|gb|EDM60855.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus AQ3810]
gi|308087746|gb|EFO37441.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus Peru-466]
gi|308091354|gb|EFO41049.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus AN-5034]
gi|308108168|gb|EFO45708.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus AQ4037]
gi|308113092|gb|EFO50632.1| ABC-type transport system, periplasmic component [Vibrio
parahaemolyticus K5030]
Length = 323
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/322 (13%), Positives = 95/322 (29%), Gaps = 11/322 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +GLFVVS L F ++ L P V SV GL + VRF
Sbjct: 1 MDDSKSSYKLGLFVVSALVSLFVVLFILGG-RSLFEPKIIVETYFDESVSGLEVGAPVRF 59
Query: 61 NGIPVGRIVGLFLD----------QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
GI G +V + L + ++ + ++ I +I G+
Sbjct: 60 RGITAGEVVSIELSDALYEAAVPRENRKSYVVVRSEITGAKRTIEEWNRSIEISIERGLR 119
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
++ + T ++ P+ + + S +
Sbjct: 120 ATTQLAGITGQQYLSFDYTSMDEGLSFNWKPNYPYVPSTKSSAGKIVSGIQSLIARLDEA 179
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+I + IET++ ++ + + + K+ I+D
Sbjct: 180 DINTLVANINMLIETLNQSISALDADALNAQLLALLINSNQMVKSVDGVISDPEVKEIVS 239
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
A + +N L++ + + + + V + + + + S
Sbjct: 240 SLAQISKSLNSSLKDKGDINKLIKHLDRAAVRLDVIMADNQSDINYVIKDLRVTVENLKS 299
Query: 291 KMKSKETSAFLENIADSTSNMR 312
++ + + ++
Sbjct: 300 FSETLKNQPSSIIFSSEPEKLK 321
>gi|111018965|ref|YP_701937.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110818495|gb|ABG93779.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 418
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/378 (10%), Positives = 104/378 (27%), Gaps = 21/378 (5%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + V+ L + + +R+ ++ SV G+ S VR G+
Sbjct: 13 RGTIALIAGIVIVALVIAGALWWVFTRAG-----TTKITAYFDKSV-GIYEGSDVRILGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + G+ + + + A T + YI+L+
Sbjct: 67 KVGSVDGVEPQGD---QVKVDLRVDRGVDIPADAKAAQVTPSVVSDRYIQLAPAYTGGDK 123
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTS------------KKISDSSRHIQKIIEN 171
+ A R + I + + + ++ E
Sbjct: 124 MQSGAVISRDRTATPVEVDELYASIEKLSTALGPDGANKEGALSQFVETGAANLDGNGEA 183
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + T++ + + + + FN+ ++
Sbjct: 184 LGQSINQLSDAARTLNESRGDLFDTVKNLQVFVGALAANDQQVRDFNSQLSDLSGFLAGE 243
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ +NQ+ + S + + + V D+ TQT + + + + L+
Sbjct: 244 RENLGAALNQLAIALGDVSKFVADNREILAENVDDLVPVTQTLADNRESLVNSLTLLPLA 303
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + S E+ ++ + + + + +
Sbjct: 304 ISNLANSYDAESGNLASRLALPDLQDPAGVACKLIDLGKLVPGDPRFEQLGRQMQPLIDN 363
Query: 352 LMSKINNISALKENNSLF 369
+ + I+ + SL
Sbjct: 364 CANITSQITQSAKTPSLV 381
>gi|254363548|ref|ZP_04979594.1| MCE-family protein mce2B [Mycobacterium tuberculosis str. Haarlem]
gi|308370455|ref|ZP_07666934.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu003]
gi|308395900|ref|ZP_07669352.1| MCE-family protein mce2B [Mycobacterium tuberculosis SUMu012]
gi|134149062|gb|EBA41107.1| MCE-family protein mce2B [Mycobacterium tuberculosis str. Haarlem]
gi|308331900|gb|EFP20751.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu003]
gi|308367199|gb|EFP56050.1| MCE-family protein mce2B [Mycobacterium tuberculosis SUMu012]
gi|323720942|gb|EGB30007.1| MCE-family protein mce2B [Mycobacterium tuberculosis CDC1551A]
Length = 287
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 4/136 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ +G+ + + F+ I + V GL VR
Sbjct: 13 MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVR--FHHTTGYSAVFTH-VSGLRAGQFVRA 69
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L + L + L +TTA+IR L G Y+EL
Sbjct: 70 AGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTASIRYLNLIGDRYLELGRGHSG 128
Query: 121 KKTIFQIATERNQRAM 136
++
Sbjct: 129 QRLAPGATIPLEHTHP 144
>gi|85713067|ref|ZP_01044103.1| Paraquat-inducible protein B, secreted [Idiomarina baltica OS145]
gi|85693106|gb|EAQ31068.1| Paraquat-inducible protein B, secreted [Idiomarina baltica OS145]
Length = 539
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/411 (9%), Positives = 118/411 (28%), Gaps = 26/411 (6%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTAT 100
I+ S + SV++ G+ VG + + E + D L +T
Sbjct: 153 IVLESDSAANIVVGDSVQYRGVTVGIVEQVDFSVEARATTYHVLIKSPYDELLTENTRFW 212
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
++ + +++ + P G + +
Sbjct: 213 LQRGVSFRWKPDGVDVSVGSIESLLGAGISFG---VPNGQPLGKPLQAMAVFDLFASEEE 269
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + L ++ + S V+ I + + P + +
Sbjct: 270 AEQQGYSRGIDYVLLLDESVDGLAVGSPVMFKGIRVGTVVEVPFRWQPDENSGQPLRLIP 329
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ D++ + ++ Q +++Q +++S + N +
Sbjct: 330 VLIRYEPDRLEGLVASTELEQWRQHLQHFFEQGLRASIRASNILT--------------- 374
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ L D + + S+ S + E + ++++ + +
Sbjct: 375 -NTLYVDLRFYPDEEAIKQDTFAGYPVMPTIVSNFSRLEEKLNSILDTLNSLP-LNQSVN 432
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
++ E +I ++ + + + + E++N + +
Sbjct: 433 QFTEAMASTDETAEEIKVLTGQLKKIVAQPGWEALPQSLAQSVERLNSILADF-----DA 487
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + ++ ++ L+ + R P +++ E + K K
Sbjct: 488 GSTNRDQLERTLQNLERMSRDLQPLVETLRRKPNALLFNTETENDPEPKAK 538
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 23/62 (37%), Gaps = 7/62 (11%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL--DQEYP-----NHSLAKALIR 88
+ ++ + SVDGL+ S V F GI VG +V + +
Sbjct: 276 SRGIDYVLLLDESVDGLAVGSPVMFKGIRVGTVVEVPFRWQPDENSGQPLRLIPVLIRYE 335
Query: 89 PD 90
PD
Sbjct: 336 PD 337
Score = 43.4 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 40/448 (8%), Positives = 121/448 (27%), Gaps = 35/448 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + +F + + + + GP V I+ +GL ++VR + VG++ + L
Sbjct: 14 LVPILAAFIAGWMVWQERDQSGPEITVQIK---DAEGLQAGKTAVRVRNVDVGQVTQITL 70
Query: 74 DQEYPNHSLAKALIRPDT--PLYPSTTATI-----------RTQGLAGITYIELSTLRK- 119
+ + + T L + + L Y++L
Sbjct: 71 S-DNFEAAELHIEMNAGTADMLVEDSQFWVVKPRIGRRGISGLNTLLSGAYVQLEPGESS 129
Query: 120 ----EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + Q + ++ + + ++++ ++E
Sbjct: 130 QSRNQFTALEQPPVTDADTDGKRIVLESDSAANIVVGDSVQYRGVTVGIVEQVDFSVEAR 189
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
TT I++ L + + + + + L + +
Sbjct: 190 ATTYHVLIKSPYDELLTENTRFWLQRGVSFRWKPDGVDVSVGSIESLLGAGISFGVPNGQ 249
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ Q + D + ++
Sbjct: 250 PLGKPLQAMAVFDLFASEEEAEQQGYSRGIDYVLLLDESVDGLAVGSPVMFKGIRVGTVV 309
Query: 296 ETSAFLENIADSTSNMR------SSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
E + +S +R E ++ +++ +S +
Sbjct: 310 EVPFRWQPDENSGQPLRLIPVLIRYEPDRLEGLVASTELEQWRQHLQHFFEQGLRASIRA 369
Query: 350 AELMSKIN--NISALKENNSLFKDAQR---AMHTFRDTSEKINRYIPSIGNNLQNF-SQS 403
+ +++ ++ + ++ +D M T ++ + SI + L +
Sbjct: 370 SNILTNTLYVDLRFYPDEEAIKQDTFAGYPVMPTIVSNFSRLEEKLNSILDTLNSLPLNQ 429
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFER 431
+N + ET ++
Sbjct: 430 SVNQFTEAMASTDETAEEIKVLTGQLKK 457
>gi|134291052|ref|YP_001114821.1| hypothetical protein Bcep1808_5628 [Burkholderia vietnamiensis G4]
gi|134134241|gb|ABO58566.1| Mammalian cell entry related domain protein [Burkholderia
vietnamiensis G4]
Length = 431
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/427 (8%), Positives = 100/427 (23%), Gaps = 24/427 (5%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS-SVRFNGIPVGRIVGLFLDQEY 77
+ + WL V + G+ D V G+ VG++ G+ L +
Sbjct: 27 VATLAVVGWLG-IRALAQGGESVTVMFSD-AHGMKVDDTDVTLRGVKVGKVAGIALSPDG 84
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
H + I Y L+G + A ++
Sbjct: 85 -RHVEVELKIDRAQQKY----------LLSGTRFFLRGAQPDMSDPTSLRALVVGPEIVM 133
Query: 138 TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI 197
E + + +I + ++ +
Sbjct: 134 EPGAGAPARHFDGTERRPALAPEHGPVVPYLIRFAGAAGELKDGAPVKLRGFQVGTVTRV 193
Query: 198 DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSS 257
+ + + + + +
Sbjct: 194 RLSYDAATGQLGTPVQIALEPSALGITGVHPPADGNWRPIVDGMLERLVARGLRARLVQD 253
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
++ + ++ S + + A + I
Sbjct: 254 PPLVGPRMVSLDFVAGASAAAFSGGAGPAEIPSVASADFGAIAARANAIAGKLDALPIKE 313
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
+ ++ + I DS +++I+ + +
Sbjct: 314 TGDDVRAIAARLNALTASPQI----RDSLAHLDRSVAQIDRTL-----QQVSPQIGPLVA 364
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
RD + ++ + L + + + + ++R+L +T + +R+P+ +V
Sbjct: 365 QLRDAANSADQAAAAASRTLGDDA-TTQTGVPAVLRELADTARSVRALADYLDRHPEALV 423
Query: 438 WGREKGS 444
GR K
Sbjct: 424 RGRAKEK 430
>gi|126736687|ref|ZP_01752426.1| Mammalian cell entry related protein [Roseobacter sp. CCS2]
gi|126713802|gb|EBA10674.1| Mammalian cell entry related protein [Roseobacter sp. CCS2]
Length = 697
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/413 (12%), Positives = 116/413 (28%), Gaps = 26/413 (6%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIV---GLFLDQEYPNHSL--AKALIRPDT--- 91
EV + SV GL+ S VRF GI +G + + + + A + P
Sbjct: 299 EVAVLFEQSVSGLAEGSEVRFQGIRIGEVSNLNAIVVGEGDNAQVRLQAVLAVEPSRLGM 358
Query: 92 --PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ + + + T T+F E + +
Sbjct: 359 GPDATTDDALALLSDFVTRGLRARMVTGNILAGTLFVELVEVEDALPAIM--NLTSGDFP 416
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
T ISD + + ++ I + + +++ + T
Sbjct: 417 VIPTTDSDISDVAATAEGLLARINALPVEELMDGAIDMMDSFERLANDEYTRATPAALVA 476
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
D D+ I + + + ++
Sbjct: 477 LLDESRELINSEDMRAIPRDFRNVIGDLDSLIAEADEAGLVADLDAAVASAAQVATNIEA 536
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
TQ ++ I+ + ++ ++ ++ + + + +A
Sbjct: 537 ATQNLPQITANIETFTARANALELEALVTSATASLDAIDAFLGTEDAAAFPAEANAA--- 593
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
S + + E + N +AL N + + A+ T + + N
Sbjct: 594 ---------LSTMRALLDEVREGGAVANVNAALASANEAARAVEEAVSTLPALAARANEL 644
Query: 390 IPSIGNNLQNFSQSGLNDIQNL--VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + ++ + + L +R +QE + ERNP ++ GR
Sbjct: 645 VAQTETVVNSYGERSRFSAETLATLRDIQEASDAISSLARAIERNPNSLLIGR 697
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 31/418 (7%), Positives = 110/418 (26%), Gaps = 30/418 (7%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLY 94
G ++ ++ + + GI VG + L + A D +
Sbjct: 164 GQRGTRVVLRADDGGSIAAGAPILHKGIQVGYLEEPELSFNGRQVVVNAFVESPYDRRIT 223
Query: 95 PSTTATIRTQG----------LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
ST + L + + T+ N PS
Sbjct: 224 SSTRFWDTSGFSLSFGAGGVSLDVSSLASVIEGGIAFDTVVSGGNPINDGHRFDIFPSEE 283
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEK------------PLTTTIANIETISTVLAN 192
S + + ++ + + ++ + + + ++ A +
Sbjct: 284 TARDSLFTDPNAEVLEVAVLFEQSVSGLAEGSEVRFQGIRIGEVSNLNAIVVGEGDNAQV 343
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ + + + + + + ++D +T + + + +
Sbjct: 344 RLQAVLAVEPSRLGMGPDATTDDALALLSDFVTRGLRARMVTGNILAGTLFVELVEVEDA 403
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + T +V + LL+ ++ + ++ +
Sbjct: 404 LPAIMNLTSGDFPVIPTTDSDISDVAATAEGLLARINALPVEELMDGAIDMMDSFERLAN 463
Query: 313 SSISAIREIT----DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + + + I + + L+++ + + + ++
Sbjct: 464 DEYTRATPAALVALLDESRELINSEDMRAIPRDFRNVIGDLDSLIAEADEAGLVADLDAA 523
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
A + ++ + + +I + +++ LV +++ D L
Sbjct: 524 VASAAQVATNIEAATQNLPQITANIETFTARANAL---ELEALVTSATASLDAIDAFL 578
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 10/83 (12%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ W + + D +I + G+S +++++ + +G + + E
Sbjct: 33 LVALGISLWAAWQSYADRGA--LITISFENAAGISAGETTIKYRDVTIGEVEDVEFS-EG 89
Query: 78 PNHSLAKALIRPDTPLYPSTTAT 100
L A + + A
Sbjct: 90 LTDVLVHARVNKTVAPFLDDDAQ 112
>gi|94312188|ref|YP_585398.1| hypothetical protein Rmet_3257 [Cupriavidus metallidurans CH34]
gi|93356040|gb|ABF10129.1| toluene transporter subunit: membrane component of ABC superfamily
[Cupriavidus metallidurans CH34]
Length = 179
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 43/127 (33%), Gaps = 1/127 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VG+FVV F + + + ++ GL + ++
Sbjct: 1 MKKTTLDYWVGVFVVLGFAALLFLALKAGNMSSFSFQETYTVTAQFDNIGGLKPRAPIKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + + + + T+A I T GL G YI L
Sbjct: 61 AGVVVGRVASIRLD-DKNYMATVELNLDKRYQFPKDTSAKILTSGLLGEQYIGLEAGGDT 119
Query: 121 KKTIFQI 127
Sbjct: 120 AMLAQGG 126
>gi|111021361|ref|YP_704333.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110820891|gb|ABG96175.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 415
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/429 (11%), Positives = 117/429 (27%), Gaps = 42/429 (9%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G +V+++ + ++ N V + + S G+ T++ V + G+PVGR+
Sbjct: 10 LIGFVLVALMGLVYVGANYVRLGNLLGFGEYTVNLELETS-GGIFTNAEVTYRGVPVGRV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
L L + + + I P + S A + + G Y++L + +
Sbjct: 69 GDLSLTPDG---VVVELRIDTSAPDIPASAKAVVANRSAIGEQYVDLRPAADREPFLADG 125
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + + + + + K
Sbjct: 126 SRIAVADTSTPVPVEELLASTQGLAESVPIDALHTVVTELGAAFDGKGEDLQSLADSLSG 185
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ S + + I D
Sbjct: 186 LSASGAESLDRTLALVRNGRTVLDTQSEQSSAIKD------------------------- 220
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
S + +D++ ++ DVR ++ L+S+ + + +
Sbjct: 221 -FSADLDSLADRLRSSDPDVRRLIDNGNPASDQVGQLVSEAGPGATTNLANLSATAKTIA 279
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
T + + AE + + + +
Sbjct: 280 VQATA-------LQTLFVYLPGVAAASSTIAPDDGTVHLGLVAETNNPPSCTVGYEGTQA 332
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
+ ++ +R F DT + + + Q S +G+ +V TV +D
Sbjct: 333 ILQEMRRNDPNFDDTQQDFPQNTAASCEAPQG-SLTGVRSANRIVFGDPATVQPWDSTP- 390
Query: 428 NFERNPQDI 436
+++P +
Sbjct: 391 --KKDPNKL 397
>gi|288926566|ref|ZP_06420483.1| mce related protein [Prevotella buccae D17]
gi|288336643|gb|EFC75012.1| mce related protein [Prevotella buccae D17]
Length = 300
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 91/290 (31%), Gaps = 6/290 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + L + + F+ + +L + + +++GL + V
Sbjct: 1 MKFFTKEVKIALVAILGVVVFFYGVNFLKGLTIFSTATTYYMT--FDNLEGLGASTPVYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + + D N + I D + +TA I + L G + +
Sbjct: 59 DGYKVGVVKSIEYDYSRKNSTRVAVGINQDMRIPKGSTAEIV-KDLMGNIQVNILLANNP 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + + + E K+ + ++ N +
Sbjct: 118 RERVEPGGVIPGGVNPGAL--GAVKGMVPEIEKMLPKLDSILASLNTLLANPAIAQSLGN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + ++ + +V + + L +L + + +VN
Sbjct: 176 IQTTTANLAISTQQLNQLMGGLNREVPGMLRKANGVLDNTNRLTNNLAAVDVQETMSQVN 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L N++ ++ + + ++D E + D L+ +F +
Sbjct: 236 RTLANMEAFTDKLNSNKGTLGLLMNDP-ELYDNLNATMRNADSLMINFKA 284
>gi|53802472|ref|YP_112894.1| paraquat-inducible protein B [Methylococcus capsulatus str. Bath]
gi|53756233|gb|AAU90524.1| paraquat-inducible protein B [Methylococcus capsulatus str. Bath]
Length = 572
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/411 (10%), Positives = 104/411 (25%), Gaps = 38/411 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L + V F I VG++V + L ++ + + I D P
Sbjct: 176 DNAGPLKYGTPVYFRDIEVGQVVNVGLAEDNRS---VQVEIFIDAP-------------- 218
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y L + I + + + S ++ + ++D
Sbjct: 219 ----YHRLVHNSTRFWQVSGIDLSLSAQGVNLKVGSIMSLLQGGITFETPTLNDPKVQSS 274
Query: 167 KIIENIEKPL---TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
+ + L + + V L
Sbjct: 275 EPNTRFRLHKDFASIAEGTYTLRQPYLLFFDDSVRGLNVGAPVELKGIRVGTVTELKLAL 334
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
K+ + ++ + L + R + E G +
Sbjct: 335 DFGAHKIRIPVVIEIDPERLIPYGAEEIIERAKKEYKAAMEAGRRPFMEKLVERGLRARL 394
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL- 342
+ + + + E+ S + + + I N+
Sbjct: 395 RTGNLLTGQLYVDLDFYPESPPKSLDYSGQYPELPTLPSVADELQRNVTEIIANLKKIPL 454
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ Q+ + N + E A+ R ++ +R + ++ + +
Sbjct: 455 DKIGQELLGTVQGSNRLLNSPELKGAVGSLNLALKDLRHLAQTADREMVTLTSAAEKSLS 514
Query: 403 SGLN-------------DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
S DI N + +L + + ER+P+ ++ G+
Sbjct: 515 STARVLEQLEPGSAMAVDISNALEELAASARSIRALTDYLERHPEALLHGK 565
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 29/91 (31%), Gaps = 3/91 (3%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPDTPLYPS 96
++ SV GL+ + V GI VG + L L + + I P+ +
Sbjct: 299 PYLLFFDDSVRGLNVGAPVELKGIRVGTVTELKLALDFGAHKIRIPVVIEIDPERLIPYG 358
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I +E +K + +
Sbjct: 359 AEEIIERAKKEYKAAMEAGRRPFMEKLVERG 389
Score = 44.5 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL+ + + GL S ++F + +G + + L+++
Sbjct: 36 LVALGIGIWLA-YRTLSEEGPTITLLFKE-APGLEAGKSKIKFKDVEIGTVESVVLNEDL 93
Query: 78 PNHSL-AKALIRPDTPLYPSTTATI 101
+ AK T L +T +
Sbjct: 94 TGVVVTAKMEKHVATHLGENTAFWV 118
>gi|326383826|ref|ZP_08205511.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197590|gb|EGD54779.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 383
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/295 (14%), Positives = 87/295 (29%), Gaps = 10/295 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G V+ ++ W + + D V+GL S V G+PVGR+
Sbjct: 19 VIG--VLIVVAALVAG-LWYAFVREPDVRTVHADFAF---VNGLYEGSKVTVLGVPVGRV 72
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
L + H + D L A ++ + ++ELS + + A
Sbjct: 73 DSLETRGD---HVSVTMTVDGDVALPADVGAFMQNPSVISERHLELSPAYTDGPKLADGA 129
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHI-QKIIENIEKPLTTTIANIETIS 187
T QR + + +S + + ++ + +
Sbjct: 130 TIPLQRTHSPISFDQLLGSMSTLTDVLSPEDTTRSTDLSSLLNKTATAWKGSGPKFNSAM 189
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
T LA+ S + S D + + + + ++I
Sbjct: 190 TELASASSVFGARTDDVEGLITSLDKLMNSFHAKQVSLDGLVRSMGVLADQWHDANQDIT 249
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
N+ DQ+ V + + +++ +LS S + A L
Sbjct: 250 TPINDLKTVFDQINQFVTEHGDDVGIVAANLEELGEVLSANRSGLAEFMDLAPLM 304
>gi|229588470|ref|YP_002870589.1| hypothetical protein PFLU0927 [Pseudomonas fluorescens SBW25]
gi|229360336|emb|CAY47193.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 551
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/403 (9%), Positives = 107/403 (26%), Gaps = 34/403 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
++ L S V + I VG++V LD E D + +T +
Sbjct: 172 TQNLGSLDIGSPVYYRKIEVGQVVAYKLDAEGKGVDIEVFVHAPNDVYVTENTRFWNASG 231
Query: 105 G-LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR 163
L+ + P+ ++ ++ +
Sbjct: 232 IDLSVGANGFALKTESLSSMLVGGIAFLAPPYSPNDKPASEERTFELFDDQLAALAPPNG 291
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
Q + + + V + + D
Sbjct: 292 QGQY---------------------MSLRFDQALRGLKVGAPVEFLGVEFGKVVSINLDF 330
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + Q+L + +K+ + N +F E G +
Sbjct: 331 DAKKRSFPLNVGIVIYPQLLGQ---AHTKLLKTMNHDPNDEAAGVRLIGSFIENGLRAQA 387
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
+ + + + + + I + +ENI + +N
Sbjct: 388 RSGNLLTGQLYIALDFYPKAEKVAFD----PKARPVSIPTIPGNLEQLQEKLENIVNKIN 443
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+ +++ ++ L + + + + ++T +++ + S + L S
Sbjct: 444 QLP--IERIAGNLDSNL-VELRKGLTQFNAKTLPSVQNTLADVSKTLQSASSTLAEDSPQ 500
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ + +L + + R+P+ ++ GR +V
Sbjct: 501 -REQLTQTLDELGRMSRSLRELSDYLGRHPESLIRGRPDNAVP 542
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 24/54 (44%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +G + +R ++ GL + V F G+ G++V + LD +
Sbjct: 282 QLAALAPPNGQGQYMSLRFDQALRGLKVGAPVEFLGVEFGKVVSINLDFDAKKR 335
>gi|119714951|ref|YP_921916.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119535612|gb|ABL80229.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 348
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/316 (10%), Positives = 91/316 (28%), Gaps = 10/316 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ T + +F+V + + + G+ VR
Sbjct: 7 RTSADLTKLLIFIVVTTLATSVLVATIGNLTFSSKHDYRAEFV---DATGVVKGDDVRIA 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG + + + +L + + +T A IR + L G YI L+ +
Sbjct: 64 GVKVGTVKSVEVV--DRTRALVTFDVDDSASISQATHAAIRYRNLVGQRYIALTDEIGDV 121
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ--KIIENIEKPLTTT 179
+ T + + + + + ++ + L
Sbjct: 122 APLPAGGTIPVSQTSPALDLTVLFNGFKPLFQALSPADLNQLSYEIVQVFQGEGGTLEGL 181
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+A+ ++++ LA+ I ++ D + + + +
Sbjct: 182 LAHTASVTSTLASRDQLIGDLIDNL---NEVLDHIGDRDVQLSRLITTFRTFVGGLKDDR 238
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
IL ++ S V+++ V +EV + +D+ ++ ++
Sbjct: 239 QAILGSLDQISELSVQTAGLVDGIREPFVSDIHQLREVARNLDNGKAELDRALQVLPIKL 298
Query: 300 FLENIADSTSNMRSSI 315
+ + +
Sbjct: 299 NKVGRTATYGSWFNFY 314
>gi|259418255|ref|ZP_05742173.1| mammalian cell entry related [Silicibacter sp. TrichCH4B]
gi|259345650|gb|EEW57494.1| mammalian cell entry related [Silicibacter sp. TrichCH4B]
Length = 677
Score = 81.9 bits (199), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/410 (9%), Positives = 110/410 (26%), Gaps = 22/410 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTA 99
+ + SV GLS ++V+ GI VG + L Q ++ + + +
Sbjct: 280 ISVAFDESVAGLSDGAAVKLGGIKVGEVGTLTASIQNESANAEVRLVAKLLLQPALLGLP 339
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + + ++
Sbjct: 340 PGAGEEDVLDFLQNAVEGGLRARLASAGLLSSELMVELVRLEDAAPAQFDRTAEPYPELP 399
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + E + A + + + T++ T + +
Sbjct: 400 SAPSDLPDFAATAEGAMERISELPVEELMAQAISTLASIEALATSESTRQAPAAAVALLE 459
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
T + + + + ++ + + + D +
Sbjct: 460 DTRALVTDPSTRALPRELQATITDLRAILQDLQQGRAVEHLTAALKDGAAAASEISSASE 519
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ L+ D + + E I M S+ I +
Sbjct: 520 ELPALVDDLRTLAAKANSLEAEELIRSVNKLMISADEVIGT------------EQARALP 567
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE-------KINRYIPS 392
++L+ + + ++ + + N+ A+ A + D +E ++ R +
Sbjct: 568 ASLSAALDEIRATLTTLREGGLVDNANATMASARDAAQSVADAAEGLPALSARLERLVAR 627
Query: 393 IGNNLQNFSQSGLNDIQNL--VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + + + L +R+++ ER+P +V+GR
Sbjct: 628 SEALVAAYGDRSNFNTETLDVLREIKSAARAVSQLARKIERDPNSLVFGR 677
Score = 43.0 bits (98), Expect = 0.093, Method: Composition-based stats.
Identities = 34/402 (8%), Positives = 98/402 (24%), Gaps = 16/402 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
++ + V F GI VGR+ L + + T+ +
Sbjct: 160 ITEGAPVLFRGIEVGRLEHPRLTVSGNSIV-----VDAFIDAPHDRRINSATRFWDTSGF 214
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ +A+ + A G S A ++R
Sbjct: 215 TVSFGADGLSLDVDSLASLVSGGIEFDAVFEGGRPASSGAVFDIYPDEATARRTAFARSM 274
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + S +++ + + L +
Sbjct: 275 AGGVAISVAFDESVAGLSDGAAVKLGGIKVGEVGTLTASIQNESANAEVRLVAKLLLQPA 334
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + ++ + E + +
Sbjct: 335 LLGLPPGAGEEDVLDFLQNAVEGGLRARLASAGLLSSELMVELVRLEDAAPAQFDRTAEP 394
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT--SNLNDSSQKF 349
++ +T+ + + + + IST+ +IE + + +
Sbjct: 395 YPELPSAPSDLPDFAATAEGAMERISELPVEELMAQAISTLASIEALATSESTRQAPAAA 454
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR--------YIPSIGNNLQNFS 401
L+ + +L ++ Q + R + + + G +
Sbjct: 455 VALLEDTRALVTDPSTRALPRELQATITDLRAILQDLQQGRAVEHLTAALKDGAAAASEI 514
Query: 402 QSGLNDIQNLVRKLQETVNHFDDC-LNNFERNPQDIVWGREK 442
S ++ LV L+ + R+ ++ ++
Sbjct: 515 SSASEELPALVDDLRTLAAKANSLEAEELIRSVNKLMISADE 556
Score = 39.9 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 12/87 (13%), Positives = 31/87 (35%), Gaps = 2/87 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + L + + E+I + G+ + +++R+ + +GR+ +
Sbjct: 7 LVWLVPLAALLVSLGIAWKNYADRGELIYIAFENASGVVANETTLRYRDVVIGRVEEVGF 66
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTAT 100
E + + D + AT
Sbjct: 67 A-EGLSKVSVAVRVDKDIAPFLDEDAT 92
>gi|260909521|ref|ZP_05916224.1| hypothetical protein HMPREF6745_0178 [Prevotella sp. oral taxon 472
str. F0295]
gi|260636369|gb|EEX54356.1| hypothetical protein HMPREF6745_0178 [Prevotella sp. oral taxon 472
str. F0295]
Length = 301
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 16/134 (11%), Positives = 43/134 (32%), Gaps = 3/134 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + L ++ + FF + +L + + + GLS + +
Sbjct: 1 MKFFTREVKIALVAIAGVVIMFFGMNFLKGLTFFSNDTGYKVA--FKDITGLSKSTPIYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG VG + G+ + + + + + +TA I + + + +
Sbjct: 59 NGFAVGVVTGIQYNYDQKGDIVVTIDLDKSMRVPQGSTAEIESDFMGNVKLNLILAPNSG 118
Query: 121 KKTIFQIATERNQR 134
+ + +
Sbjct: 119 QF-LSPGDVIQGHV 131
>gi|289752629|ref|ZP_06512007.1| LOW QUALITY PROTEIN: MCE-family protein mce2b [Mycobacterium
tuberculosis EAS054]
gi|289693216|gb|EFD60645.1| LOW QUALITY PROTEIN: MCE-family protein mce2b [Mycobacterium
tuberculosis EAS054]
Length = 276
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 4/136 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ +G+ + + F+ I + V GL VR
Sbjct: 1 MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVR--FHHTTGYSAVFTH-VSGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L + L + L +TTA+IR L G Y+EL
Sbjct: 58 AGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTASIRYLNLIGDRYLELGRGHSG 116
Query: 121 KKTIFQIATERNQRAM 136
++
Sbjct: 117 QRLAPGATIPLEHTHP 132
>gi|254818333|ref|ZP_05223334.1| mce-family protein mce1f [Mycobacterium intracellulare ATCC 13950]
Length = 579
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 86/285 (30%), Gaps = 13/285 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ +G+F+V+ + + +++ V + +P + GL S+V
Sbjct: 1 MLTRFVRIQLGIFLVAGIIGVVAMVLFYIQAPTLLGIGRMTVTLELPAT-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G++ + L + A + + TA + + G Y++L
Sbjct: 60 YRGVQLGKVTAVGLTPTG---AKATLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPKTN 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + R P NA S + + + + E
Sbjct: 117 SPPYLHDGSVI-SVRDTTIPQPVAPMLEQVNAMVQSIPKAKLGQLLDESFEGFNGTGYDL 175
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I++ T+ + +D+ ++ T +
Sbjct: 176 GSLIDSSKTLSRDANGVVDRT-------RALTEDTGPLLDTQAHTTDSIRTWARSFAGIS 228
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ ++ N K D + + T + + +
Sbjct: 229 DVLVNNDSHFRTILEKGPDTANEASRLLEQIKPTLPVLLANLTTI 273
>gi|169628786|ref|YP_001702435.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169240753|emb|CAM61781.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 355
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 43/116 (37%), Gaps = 4/116 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GL V ++ + + +++ G V GL VR G+ VGR+
Sbjct: 10 LIGLAVFLVIATALTWLVYVTLRRDVKGATVSYGAMFTD-VFGLREGDDVRIAGVRVGRV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+ L + ++ L S A++ Q + G Y+ L+ ++ +
Sbjct: 69 QHIELVGTT---AKVSFAVQDGQRLPASINASVTYQNIVGQRYLALTQTHPDQGGL 121
>gi|159026051|emb|CAO86292.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 444
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/398 (13%), Positives = 129/398 (32%), Gaps = 16/398 (4%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
W+ + ++I V+GL + VRF G+ VGRI N
Sbjct: 22 VFGVLAIWVRG-GGFGQRTYQLIFEF-ADVEGLQVGAPVRFRGVRVGRITSFIP---GSN 76
Query: 80 HSLAKALIRPDTPL-YPSTTATIRTQGLAGITYIELSTLRK---EKKTIFQIATERNQRA 135
A I T + T T GL G I+++ L E K + ++ + +Q+
Sbjct: 77 QVEVIAEIASATLVMPRKVTVTTNLSGLIGEAAIDITPLVSLSAEAKNLDPLSPDCDQQL 136
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
++ + ++ ++ D+ + + + T IA + + +
Sbjct: 137 ILCNNSRLQGKTGTQLMSSVGRLVDTFTSPEFVGNLNDVTKNTAIAAQKIARLSDDTSQT 196
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ ++++ + + + + + + + +QI Q SS
Sbjct: 197 IRNAQREISRLSLELATTSRSVTNTANNASRFVNTLDNTVQENRSQISRTFQQSSQLVAN 256
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ + + T + I L ++ ++ + N+ + +
Sbjct: 257 LNAVLSENRGQIVNTLDNINQASLGIGSLANNLNNTAMRLNAGLDEIDTKQVMQNVETIL 316
Query: 316 SAIREITDQRQKIISTINTIENIT------SNLNDSSQKFAELMSKINNISALKENNSLF 369
+ E ++ ++I TIN I + + + ++ S I+++ +
Sbjct: 317 NNAVETSNNLREITKTINDPATIVVLQKTLESARVTFENTQKITSDIDDLIGDPQFRENL 376
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + + E++ + I L +Q
Sbjct: 377 RRLIDGLSNLLSSGEQLEYNL-RIAQTLDTMTQELAKQ 413
>gi|108759907|ref|YP_628532.1| Mce family protein [Myxococcus xanthus DK 1622]
gi|108463787|gb|ABF88972.1| Mce family protein [Myxococcus xanthus DK 1622]
Length = 402
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 46/134 (34%), Gaps = 4/134 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ GLFV L + + + + ++ +V GL+ +S V G+
Sbjct: 11 RRLALRTGLFVAVGLAVASVVVMVIGQQSRLFERKTMYRAYF-ANVQGLNDESPVWLGGL 69
Query: 64 PVGRIVGLFLDQE-YPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKE 120
VGR+ G+ + + + + + A + + G+ G +++S
Sbjct: 70 NVGRVTGIVFSPDPNDPRLEVQFQVSSRYTDRVRQDSVAQLSSMGVLGDKAVDISLGSPT 129
Query: 121 KKTIFQIATERNQR 134
+ ++
Sbjct: 130 SPPVEAGGVLKSST 143
>gi|312891374|ref|ZP_07750891.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
gi|311296068|gb|EFQ73220.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
Length = 316
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/307 (12%), Positives = 91/307 (29%), Gaps = 18/307 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + T +G V L +L ++ + + V GL+ V
Sbjct: 1 MKI-SNETKIGALTVISLAILILGYSFLKGNDVFTTENKFYALY--NDVSGLAVSKPVLV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG P+GR+ + L + + I+ + +T A + L G I +
Sbjct: 58 NGFPIGRVSKMELKPDGRTQ--VEFKIQQKYDIPKNTLAKLEGTDLLGSKAIIFELGDSK 115
Query: 121 KKTIFQIATE-------RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ + + I + + + I +
Sbjct: 116 EMAENKDTLRAFVKGGLAESLQPVQKKAELIIGKMDSILTSVNAIMNPRFQKNVDRSFNS 175
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
T T + V S++ K++ +T + + +K+
Sbjct: 176 IANTLQSLEGTTQKVDALVGKQSVRINNILANVESISANLKSSNVYLTGTLANFNKISDD 235
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVH------DVRETTQTFQEVGQKIDHLLSD 287
+ + Q L+N + + + ++ N + + ++ +++L D
Sbjct: 236 VAKSNIKQTLDNANKAVADLQNTIAKINNGQGSLGLLLNDDKMYNNLRDASANLNNLFID 295
Query: 288 FSSKMKS 294
+ KS
Sbjct: 296 IKAHPKS 302
>gi|260431686|ref|ZP_05785657.1| mammalian cell entry related protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415514|gb|EEX08773.1| mammalian cell entry related protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 677
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/417 (11%), Positives = 113/417 (27%), Gaps = 16/417 (3%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-----HSLAKA 85
+ EV + SV GL+ ++V+ G+ VG + + E + + K
Sbjct: 270 FARSRSGGVEVAVAFDESVAGLTNGAAVKLGGVTVGEVGSVNAVIENESDEAEVRLVVKL 329
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
L+ P P R +F + A P+
Sbjct: 330 LLDPALMGLPQGAGEDEVFDFLEQAVTNGMRARLASSGLFSSELFVELVTLEDADPAEFQ 389
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + E L A + + + + +
Sbjct: 390 RD----AEPFPLLPSAPSDLPDFTATAEGALERISNLPIEELISQAVDTLASIEALVSDE 445
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + T + S + + ++ ++ + +
Sbjct: 446 NIRQAPQAAVALLQDTRALVSDPETQALPAELRAAVADLRSIMAELERGQAVANLTAALE 505
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
T +++ L+ +F + E I + + S+ + I +
Sbjct: 506 QGSTITANLAATSEELPALVDEFRALAAKANALEAEELIRAANQLLSSADALIGTDDARA 565
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK 385
+ + + E N +A+ S + A + +
Sbjct: 566 LP-----GAMVEALDEVRATLASLREGELVDNANAAMASARSAAEAVSAATEDLPSLTAR 620
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNL--VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ R + L ++ + + + L +R+++ ERNP +V+G+
Sbjct: 621 LERLLAQSEALLADYGDNSTFNTETLSVLREVKAAAQAVSLLARKIERNPNSLVFGK 677
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/401 (10%), Positives = 103/401 (25%), Gaps = 14/401 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGLAGIT 110
+S + V F GI VGR+ L + + A D + +T + I
Sbjct: 160 VSEGAPVLFRGIEVGRLERPRLTVSGDSIVVDAFIEAPHDRRINSATRFWDSSGFSVSIG 219
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
LS ++ E + S F + + + + +R +E
Sbjct: 220 ASGLSLDVDSIASLVAGGIEFDTVFKGGRPVSSGAVFDIYPDEATARRTAFARSRSGGVE 279
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + L ++ + +
Sbjct: 280 VAVAFDESVAGLTNGAAVKLGGVTVGEVGSVNAVIENESDEAEVRLVVKLLLDPALMGLP 339
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
A + + + + + + + SS + + T + + D
Sbjct: 340 QGAGEDEVFDFLEQAVTNGMRARLASSGLFSSELFVELVTLEDADPAEFQRDAEPFPLLP 399
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
S I + I + + ENI +
Sbjct: 400 SAPSDLPDFTATAEGALERISNLPIEELISQAVDTLASIEALVSDENIRQAPQAAVA--- 456
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN--RYIPSIGNNLQNFS------Q 402
L+ + + E +L + + A+ R ++ + + ++ L+ S
Sbjct: 457 -LLQDTRALVSDPETQALPAELRAAVADLRSIMAELERGQAVANLTAALEQGSTITANLA 515
Query: 403 SGLNDIQNLVRKLQETVNHFDDC-LNNFERNPQDIVWGREK 442
+ ++ LV + + + R ++ +
Sbjct: 516 ATSEELPALVDEFRALAAKANALEAEELIRAANQLLSSADA 556
Score = 44.9 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 30/84 (35%), Gaps = 2/84 (2%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS-VRFNGIPVGRIVGLFLDQE 76
L + L + + +I + G++ D + VR+ + +G++ + +
Sbjct: 10 LVPLVALLVSLGVAWKSYADRGVLIEITFENASGITPDDTTVRYRDVVIGKVEDVGFA-D 68
Query: 77 YPNHSLAKALIRPDTPLYPSTTAT 100
+ A I + Y AT
Sbjct: 69 DLSRVSVWARIDKEIAPYLDEDAT 92
>gi|91203175|emb|CAJ72814.1| hypothetical protein kustd2069 [Candidatus Kuenenia
stuttgartiensis]
Length = 273
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 34/202 (16%), Positives = 66/202 (32%), Gaps = 5/202 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
G+F + L +++ L Y P + R V GL VRF G+ VG
Sbjct: 8 ELRAGIFTIITLICLSIALFILGSQKGYFRPHVTLKARFLH-VYGLQKGVPVRFMGVTVG 66
Query: 67 RIVGLFLDQEYP-NHSLAKALIRPDTP--LYPSTTATIRT-QGLAGITYIELSTLRKEKK 122
++ + L +E P N + + + ATI+ + G +Y+E+S+
Sbjct: 67 QVRNIILPEESPCNEIEVVMQVDKAVQKNILTDSVATIKWLSYVTGDSYVEISSKDCTGH 126
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
I T + M + + D + + +I +
Sbjct: 127 IIKDGDTIKGAEPMDYTSAIENGTIAIKSIARFFNKLDEGKFAETLISVSLSLNESITQF 186
Query: 183 IETISTVLANNISHIDKMMHTT 204
E+ + A +++
Sbjct: 187 RESTGLLNALIYDVRGRLLMDN 208
>gi|257092689|ref|YP_003166330.1| Mammalian cell entry related domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257045213|gb|ACV34401.1| Mammalian cell entry related domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 311
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 3/113 (2%)
Query: 25 IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
I+W + E + +V GLS VR+ GI VG++ + LD + + L +
Sbjct: 25 IWWFGGRH---EATKEYTVVTRQNVTGLSLQGQVRYRGIRVGKVQSIELDPQDVRNILVR 81
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ P+ TTA + QG+ GI +I L + + E + AM
Sbjct: 82 INVDRAVPVTQGTTAKLGYQGITGIAHILLEDRGADATPLVGGEGESPRIAMQ 134
Score = 43.8 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 61/180 (33%), Gaps = 15/180 (8%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ G L+ + S+ +E ++D+ + + +Q +
Sbjct: 111 LEDRGADATPLVGGEGESPRIAMQSSLIEELSDAGTATLRQARDLLTSANQVLDAENR-Q 169
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKE----------NNSLFKDAQRAMHTFRDTS 383
+ NI +NL+ ++ ++ + A + +A A+ R
Sbjct: 170 HLTNILANLDATTGNANAATRQLRQLLAPENVRLLQTTLARAEQAAGEAAPALVEARRLL 229
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL----QETVNHFDDCLNNFERNPQDIVWG 439
++ + + + S G+ + + +L + + L E +PQ +++G
Sbjct: 230 VRLQSVSEKLDQLIGDPSPGGIGALAPRLNELGSELSASSRQLNRVLQMLEESPQSLIFG 289
>gi|226364096|ref|YP_002781878.1| Mce family protein [Rhodococcus opacus B4]
gi|226242585|dbj|BAH52933.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 494
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 50/144 (34%), Gaps = 5/144 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSF-FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M SK + +F V + ++ +L M + GL +S V
Sbjct: 1 MRSKLVRFQLIVFSVVAVLAVGNAAVNYLGLKRVTGIGMYTITAEFDR-AGGLYVNSLVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VG + + + + + A+ + D + ++ A +R+ G Y+++
Sbjct: 60 YRGVDVGVVKSIDVRPD---RASAELQLDSDFAVPANSQAFVRSVSAIGEQYLDIVPASS 116
Query: 120 EKKTIFQIATERNQRAMITATPSG 143
E + Q I S
Sbjct: 117 EGPFLEDGDVITEQNTEIPVPASE 140
>gi|295675554|ref|YP_003604078.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1002]
gi|295435397|gb|ADG14567.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1002]
Length = 553
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/453 (10%), Positives = 121/453 (26%), Gaps = 52/453 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-IRIPGSVDG---------------- 51
VG VS L Y + + + + + + P + G
Sbjct: 135 RVGASGVSGLTTLLSGAYIGADAGRSSDSESNFVGLETPPPITGDQKGRQYTLHGESLGS 194
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++VG LD+ + P R +G+
Sbjct: 195 IDIGSPIFYRRVQVGQVVGFSLDKSGTG---VTMQVFVSAPFDQYVGTNTRWWHASGVDL 251
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K S + N + +
Sbjct: 252 RLDSSGFKLNTQSLATVIVGG--------LSFQSPPGQNMGPQAPNNQTFRLGSDQADAM 303
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E + ++ +I T + + +
Sbjct: 304 REPDGVPLRVVMNFNQSLRGLSIGAPVDFRGIVLGQVTDIGIDYDPTTRSFTMPVTMNVY 363
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + + +R ++ +D +K
Sbjct: 364 PDRLGKRFRESAPQPGSLAGENLLQELVKHGLRGQLRTGNLITSQLYVALDIFPKAAPAK 423
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + L I ++ ++ ++ I + D+ + I +NLN + + +
Sbjct: 424 VDVTKDPLELPTIPNTLDELQLQVADIAKKLDKVP--------FDQIGANLNTALKNADQ 475
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L S+++ + A+ + + T + +D+
Sbjct: 476 LFSRLDK--------EVVPQARDTLSAAKQTFNSAQATLQQ--------DSPMQSDVHQA 519
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+++L T+ + + ER+P+ ++ G+
Sbjct: 520 LQELTRTLQSLNALSDYLERHPESLLRGKSGDK 552
>gi|226364209|ref|YP_002781991.1| Mce family protein [Rhodococcus opacus B4]
gi|226242698|dbj|BAH53046.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 351
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/295 (12%), Positives = 98/295 (33%), Gaps = 8/295 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VG+ V+I + + G + GL T +V
Sbjct: 1 MKTERNPVQVGIIGVAIASMIVIATLQYDQLQFLSG-GTQYSAYF-EDAGGLMTGDTVTL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD + L I+ L +T A I+T + G + + L +
Sbjct: 59 AGVDVGKVAEVELDDQN---VLVTFTIQDGIALGDATEANIKTNTVLGRKSLAVIPLGHD 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + + +E + +++++ + +EN L T +
Sbjct: 116 TMRVGSTIPLERTNSPYSLNDALGDLSTTVSELDTDEVNNALNAMSGALENTPPELRTAL 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +S + + + +++ + ++ + + ++
Sbjct: 176 DGLTRLSESINSRDESLRQLLSRAENVTGILAERSGQINSLIVDGNQLFGELDRRRAAIS 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q++ NI S V + ++ T V + + S +
Sbjct: 236 QLIVNISEVSRQLT---GLVQDNEEQMKPTLDKLNSVVDILQRNKDNISQALDGL 287
>gi|50120499|ref|YP_049666.1| putative paraquat-inducible protein [Pectobacterium atrosepticum
SCRI1043]
gi|49611025|emb|CAG74470.1| putative paraquat-inducible protein [Pectobacterium atrosepticum
SCRI1043]
Length = 548
Score = 81.5 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/401 (10%), Positives = 101/401 (25%), Gaps = 33/401 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L + S V + IPVGR+ L+ + + + D P T R
Sbjct: 167 DDLGSLDSGSPVYYRRIPVGRVASYQLNNDGHG---VQFQVFIDAPYDRFVTPNTRFWNA 223
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+G+ + + + A A T
Sbjct: 224 SGMDLSVDANGFRLRTQ-TLAAVVAGGIAFSTPDLDNAIARPEPLTTY------------ 270
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + + + V S + D +
Sbjct: 271 ---KLARDQESALLPPDGPPILFKLRFDRSLHGLEVGAPVEFSSVKIGHVTTIELDYSKT 327
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ ++++ L N+ K Q ++ E T E G + S
Sbjct: 328 GYRFPTVVNIEVFPNRLGNV------LDKLPKQAMSLEQQTAEFTLDLVEHGLRAQVAPS 381
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + + + + + I I +
Sbjct: 382 NLLTGQLYISLDFVHDAAKVPFDINAQPLVLPTVNGGFDRLQTQMASIIGKIDNMP---- 437
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ +N +L + + + + + + + + L+ S L
Sbjct: 438 --LDAIGRNMNTTLIEAN-KALRQVNGQTLPEASRLMKHMQQATRRVQDVLEEDSPLQLG 494
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
I ++++Q T+ ER+P+ ++ GR
Sbjct: 495 -ITQSLQEIQRTLRALRSLAEQIERHPESLLQGRSNAPSPS 534
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPD 90
DGP +R S+ GL + V F+ + +G + + LD + ++ + P+
Sbjct: 284 DGPPILFKLRFDRSLHGLEVGAPVEFSSVKIGHVTTIELDYSKTGYRFPTVVNIEVFPN 342
>gi|323529754|ref|YP_004231906.1| Mammalian cell entry related domain-containing protein
[Burkholderia sp. CCGE1001]
gi|323386756|gb|ADX58846.1| Mammalian cell entry related domain protein [Burkholderia sp.
CCGE1001]
Length = 538
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/399 (8%), Positives = 99/399 (24%), Gaps = 36/399 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
S+ + S + + + VG++ GL LD++ + P
Sbjct: 174 ESLGSIDIGSPIFYRRMQVGQVYGLSLDKDGKG---VTMQVFVAAP-------------- 216
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + + + + T S + I + Q
Sbjct: 217 ----YDQYVGTNSRWWHASGVNVRLDSNGFVVNTQSVTSILIGGLSFRAPPGQAPG--PQ 270
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + + + ++ + V +TD+
Sbjct: 271 AADHTSFRLASDEADAMRAPDGTPVRAVMNFNQSLRGLSVGAAVDFRGILLGQVTDIGVD 330
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
D + + ++ + + + ++ + E G +
Sbjct: 331 YDPGTHSFTMPVTLELYPDR---LRRRAHGTPVPERGTAENQQLLRHLVERGLRGQLRTG 387
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + F + S R + + + + D
Sbjct: 388 NLLTGQLYVALDIFPKAAPVSFDPARDPLELPTIANSLDALQTQIADIAKKLERIPFDHL 447
Query: 347 QK-FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+ + + A + A+ + + T +
Sbjct: 448 GNNLNNSLKNADKLFAQLST-EVMPQARDTLAAAKQTFSSAEATLRQ--------DSPMQ 498
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+D+ +++L T+ + + ER+P+ ++ G+
Sbjct: 499 SDMHQALQELTRTLQSLNALADYLERHPESLLRGKTGDK 537
Score = 49.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 33/240 (13%), Positives = 65/240 (27%), Gaps = 13/240 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPD- 90
DG ++ S+ GLS ++V F GI +G++ + +D + + + PD
Sbjct: 291 DGTPVRAVMNFNQSLRGLSVGAAVDFRGILLGQVTDIGVDYDPGTHSFTMPVTLELYPDR 350
Query: 91 -------TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
TP+ TA Q L + + A P
Sbjct: 351 LRRRAHGTPVPERGTA--ENQQLLRHLVERGLRGQLRTGNLLTGQLYVALDIFPKAAPVS 408
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ E + S + Q + ++ L N ++
Sbjct: 409 FDPARDPLELPTIANSLDALQTQIADIAKKLERIPFDHLGNNLNNSLKNADKLFAQLSTE 468
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+ + + T D+ + Q L S N ++ +
Sbjct: 469 VMPQARDTLAAAKQTFSSAEATLRQDSPMQSDMHQALQELTRTLQSLNALADYLERHPES 528
>gi|296135335|ref|YP_003642577.1| Mammalian cell entry related domain protein [Thiomonas intermedia
K12]
gi|294339440|emb|CAZ87799.1| Toluene tolerance protein Ttg2C [Thiomonas sp. 3As]
gi|295795457|gb|ADG30247.1| Mammalian cell entry related domain protein [Thiomonas intermedia
K12]
Length = 158
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 3/118 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVR 59
M + VG+ VV F Q + GP V R ++ GL D+ V+
Sbjct: 1 MNQRKIDLWVGILVVLGAAALLFLALKAGNLLQINWGPTYTVTARF-DNIGGLKADAPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + I T+A I T GL G YI+ S
Sbjct: 60 SAGVVVGRVTSITFD-NQTFQADVHMAIDQRFKFPVDTSAKILTAGLLGDQYIDFSPG 116
>gi|119717047|ref|YP_924012.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119537708|gb|ABL82325.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 361
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 82/276 (29%), Gaps = 8/276 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G+F V + + + G + + + L VR G+ VG
Sbjct: 12 IKLGIFTVVSILVTGLLAAIMGNVGFGAGTTYQAV---FSTASMLVKGDDVRVAGVSVGE 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK-KTIFQ 126
+ + + +L ++ D PL ++ A IR L G Y+ L + + +
Sbjct: 69 VKKVE--HYDRSQALVTFRVQSDVPLTTASRAEIRFLNLVGDRYLALEEGADTEARPLES 126
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII--ENIEKPLTTTIANIE 184
T R + + + + + + + +
Sbjct: 127 GDTIPIDRTRPGLDLTTLFNGFQPLFQALNPQQVNDLSMNLVQVLQGEGGTVQGLLQKTA 186
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+++ LA+ I +++ T + D ++ + + A D + L+
Sbjct: 187 SLTNTLADRDRLIGQVVDNLGQTLATVDDRHQQLSDLVVGLKDWMADLARDRGTIGSSLQ 246
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
NI + Q V + + +
Sbjct: 247 NISDLTVVVADLLRQGRPLVKSDVAKLRRLAALLNE 282
>gi|183980212|ref|YP_001848503.1| MCE-family protein Mce6B [Mycobacterium marinum M]
gi|183173538|gb|ACC38648.1| MCE-family protein Mce6B [Mycobacterium marinum M]
Length = 357
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/177 (18%), Positives = 58/177 (32%), Gaps = 9/177 (5%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ V F+V + + +++ GP A V GL VR G
Sbjct: 9 RRGALLWVAFFLVVATALT--WMVYVTLRRDVKGPTARYGALFTD-VFGLREGDDVRVAG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VGR+ + LDQ + +++ P+ T A+I Q + G Y+ L+ R +
Sbjct: 66 VRVGRVQKVELDQ---TLARVSFIVQQGQPILTDTIASITYQNIVGQRYLALAPGRTGRG 122
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + PS + N + D + I T
Sbjct: 123 ---IPIPPGSVIPVERTEPSFDIGTLLNGYEPLFAVLDPDQVNNFTKAVIASLQGDT 176
>gi|114328118|ref|YP_745275.1| paraquat-inducible protein B [Granulibacter bethesdensis CGDNIH1]
gi|114316292|gb|ABI62352.1| paraquat-inducible protein B [Granulibacter bethesdensis CGDNIH1]
Length = 323
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 89/297 (29%), Gaps = 19/297 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ T+VG FV+ ++ ++ + GS+ GL+ + V F
Sbjct: 1 MVNR--QTAVGAFVIGGFILGAAALMTFGHF-RFFSQSIRAAVVFQGSISGLAVGAPVTF 57
Query: 61 NGIPVGRIVGLFLD---QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG + + ++ ++ + + PD Q + E ++
Sbjct: 58 RGVRVGAVESIAINFDQEDQAAYIPVVIDLDPD-------------QVTVVESQHENNST 104
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
K+ I + S +N A +S + + + +
Sbjct: 105 LDLKRLIAHGLRAQLNMQSFVTGQSNVNLDFDPASPAPLHPRLTSLTEIPVKPSAIQKMK 164
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+A++ + + + + + ++ + T ++ ++ +
Sbjct: 165 DVLADLPLKELAGSASAVMDNIRILSQRLDDDLPPLLASIRTSSEHSQKTLDVVAETMVD 224
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ I + V + Q+ D Q+ L + S +
Sbjct: 225 LQKNLSTTITNLNALLVNGNRQLDARSADAHVALLNIARTAQRATSTLDNLRSMTAT 281
Score = 36.8 bits (82), Expect = 7.9, Method: Composition-based stats.
Identities = 29/205 (14%), Positives = 79/205 (38%), Gaps = 5/205 (2%)
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + +F +S ++ QK+ +L+D K +
Sbjct: 120 NMQSFVTGQSNVNLDFDPASPAPLHPRLTSLTEIPVKPSAIQKMKDVLADLPLKELAGSA 179
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
SA ++NI + + + R + T++ + + D + + ++ +N
Sbjct: 180 SAVMDNIRILSQRLDD--DLPPLLASIRTSSEHSQKTLDVVAETMVDLQKNLSTTITNLN 237
Query: 358 NIS--ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+ ++ ++ DA A+ T+++ + ++ + S+S + ++ + +R +
Sbjct: 238 ALLVNGNRQLDARSADAHVALLNIARTAQRATSTLDNLRSMTATGSESRV-NLDDALRDI 296
Query: 416 QETVNHFDDCLNNFERNPQDIVWGR 440
++ ERNPQ ++ GR
Sbjct: 297 AAAAAALRGFASDVERNPQLLLTGR 321
>gi|15839992|ref|NP_335029.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|13880134|gb|AAK44843.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
Length = 287
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 44/136 (32%), Gaps = 4/136 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ +G+ + + F+ I + V GL VR
Sbjct: 13 MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVR--FHHTTGYSAVFTH-VSGLRAGQFVRA 69
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L + L + L +TTA+IR L G Y+EL
Sbjct: 70 AGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTASIRYLNLIGDRYLELGRGHSG 128
Query: 121 KKTIFQIATERNQRAM 136
++
Sbjct: 129 QRVAPGATIPLEHTHP 144
>gi|302525565|ref|ZP_07277907.1| predicted protein [Streptomyces sp. AA4]
gi|302434460|gb|EFL06276.1| predicted protein [Streptomyces sp. AA4]
Length = 398
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/382 (10%), Positives = 104/382 (27%), Gaps = 18/382 (4%)
Query: 2 ESKNYY---TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
E++ T +G V+ L + L + ++ +V GL SSV
Sbjct: 4 ETRAGRSLVTWLGFACVAALLLTAGIYLVLRDTG-----GTKISAYFGKTV-GLYAGSSV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ + + + + D P+ A + + L Y++L+
Sbjct: 58 RVLGVAVGQVTAVTPEGQ---AVRVDMKVNDDVPIPKDVGAVVVSPSLVSDRYVQLTPAY 114
Query: 119 KEKKTIFQIAT-----ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
T+ + S + N + K S + N++
Sbjct: 115 DSGPTLASGTVLARDKTATPVELDDLYASLDKLSTALGPNGANKNGAFSDLLDTAAANLK 174
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + ++ + D + T + + + + ++ + +
Sbjct: 175 GNGKDLNSTVSRLAELAGTLDDSKDDLFSTVKNLNSFTSALSQSDSQLNEFYRRLADVSG 234
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + + S + V + + + + + + + + +
Sbjct: 235 FLADDSHDVGAALDSLSTSLQDVKQFVADNKNGLSSNVAKLASLTKVLVDQRAALAEVLD 294
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF-AEL 352
T A ++ ++ + L D+ +L
Sbjct: 295 IAPTGATNFINTYDAASGTIAVRDNLNEITNPPILTVCRLISAGTPKPLPDTLGNICKKL 354
Query: 353 MSKINNISALKENNSLFKDAQR 374
++ L Q
Sbjct: 355 APVLDGTLKLPSIPQALNSLQN 376
>gi|254496224|ref|ZP_05109118.1| ABC transport system periplasmic substrate binding protein
[Legionella drancourtii LLAP12]
gi|254354529|gb|EET13170.1| ABC transport system periplasmic substrate binding protein
[Legionella drancourtii LLAP12]
Length = 280
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/265 (18%), Positives = 92/265 (34%), Gaps = 4/265 (1%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ + + GLS D++V++NG+ VG + + L++ P I
Sbjct: 3 VGFNKKSYNFYTVYLHEAASGLSKDAAVKYNGVQVGYVHEIKLNKNDPRQVEIILSIESG 62
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
TP+ ST AT+ +QG+ G+TYI L+ + I ++ E +I A PS N S
Sbjct: 63 TPITTSTVATLISQGITGVTYIGLTAGSSDLTPIKKLPGEP--YPVIPARPSLFNQLDSL 120
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ S+ I S Q I I T + + S +
Sbjct: 121 LKEVSESIGKVSVQAQHIFNEENASHVRHILANMERLTGVVAHNSKKIDTSIKNADVFLA 180
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS--SDQVINTVHDVR 268
+ +K++ + + + K + S+ + K+ TV
Sbjct: 181 NLAKSSHDFPQMIRELQTGISKFKTMADSLSKAGTSVSSTMSSGKNTLEKLSQETVAPAA 240
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + ++ + S+
Sbjct: 241 ILLRRLNAISANLEQVSSEIRQNPS 265
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 24/187 (12%), Positives = 60/187 (32%), Gaps = 5/187 (2%)
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
+ + + ++D LL + S + A ++ S++R ++
Sbjct: 94 TPIKKLPGEPYPVIPARPSLFNQLDSLLKEVSESIGKVSVQAQHIFNEENASHVRHILAN 153
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
+ +T I+T + K S + ++E + +
Sbjct: 154 MERLTGVVAHNSKKIDTSIKNADVFLANLAK-----SSHDFPQMIRELQTGISKFKTMAD 208
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ ++ + S N L+ SQ + L+R+L + + + +NP ++
Sbjct: 209 SLSKAGTSVSSTMSSGKNTLEKLSQETVAPAAILLRRLNAISANLEQVSSEIRQNPSVVI 268
Query: 438 WGREKGS 444
G
Sbjct: 269 RGSAAPK 275
>gi|297191129|ref|ZP_06908527.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297150773|gb|EFH30781.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 345
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 7/141 (4%)
Query: 1 ME-SKNYYT---SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+ S+ T V + + + ++ + N P V L
Sbjct: 1 MKASRATATAAPLVKFLLFAAVTILATTLLAATIVNVSFTPEHTYRAVFSD-VTSLEEGD 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
+R G+ VG + + + + + + D PL ST A IR + L G Y+ L+
Sbjct: 60 DIRVAGVRVGEVQAIRI--KDRTLAEVTFSVTRDRPLLTSTGAVIRYRSLVGQRYVALTE 117
Query: 117 LRKEKKTIFQIATERNQRAMI 137
+ + T R
Sbjct: 118 GAGDGTRLRPGGTIPLARTQP 138
>gi|169632330|ref|YP_001706066.1| toluene tolerance efflux ABC transporter periplasmic
substrate-binding protein [Acinetobacter baumannii SDF]
gi|169151122|emb|CAO99788.1| toluene tolerance efflux transporter (ABC superfamily, peri-bind)
[Acinetobacter baumannii]
Length = 226
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRS-NQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+S+ +VG+FV+ FF +S + + +V+GL + V
Sbjct: 1 MKSRTSELAVGIFVIIFGIALFFLAMKVSGLVGTNLSDGYTMKAQF-DNVNGLKPRAKVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 60 MSGVTIGRVDSITLDPVT-RLATVTFDLDGKL 90
>gi|325003319|ref|ZP_08124431.1| virulence factor Mce family protein [Pseudonocardia sp. P1]
Length = 417
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 3/109 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ V +++ ++ L+ +N G E R GL VR G+ VG +
Sbjct: 9 LIKFLVFALVTALGTTVLGLTIANARGGDTTEYTARFTD-ATGLLAGDDVRIAGVVVGSV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + + + + T L ST A ++ + L G Y+ L
Sbjct: 68 KDVRIV--DRRVAEVEFDVNSSTQLPASTNAALKYKNLIGQRYLALDQG 114
>gi|300312724|ref|YP_003776816.1| paraquat-inducible B protein [Herbaspirillum seropedicae SmR1]
gi|300075509|gb|ADJ64908.1| paraquat-inducible B protein [Herbaspirillum seropedicae SmR1]
Length = 542
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/401 (9%), Positives = 103/401 (25%), Gaps = 29/401 (7%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ + L S + + I VG++V LD + I + P T T R
Sbjct: 171 VLHTNDLGSLDIGSPIFYRRIKVGQVVAYDLDADGRG---VTLRIFVNAPYDKFVTQTSR 227
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
+G ++ K AE + ++
Sbjct: 228 FWHASGFDMELNASGFKLHTQALATVVLGGIAFRDRDEDRVSAPAKEGAEYALVEDESAA 287
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+ + + ++ + +
Sbjct: 288 MKEPDGVPQTALLYFDQSLRGLQPGATVDFRGVVLGEVKSIGVEYDKARGEFRMPVVVQI 347
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
L + + ++ ++ +++ + N + F +
Sbjct: 348 YPERLGRRFQEETGEQRRSNAHLLRTLVKRGLRAQLRNGNLLTGQLYVAIDFFPKAK--- 404
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ E ++ + + + ++ + I +L
Sbjct: 405 --PAQIDPDKTPLELPTIPGSLDELQQQLSDIAGKLSKVP------------FDEIGRDL 450
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ + + +S +A N + + Q AM R T R +
Sbjct: 451 QTTLKTLNKTLSTAEQTAARIN-NDIAPEMQAAMKDARKTLNAAERTLSDDAP------- 502
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
DI+ +++L + + +++P+ ++ G+++
Sbjct: 503 -LQQDIRQTMQELSKAAASIRILTDYLQQHPESLIRGKQEP 542
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/447 (8%), Positives = 109/447 (24%), Gaps = 29/447 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L ++ LS + ++ S +GL + V++ + +G++ L L
Sbjct: 28 LVWLIPIIAAVVGLSLVAKILIDRGPLVTVTFRSAEGLEAGKTRVKYKDVEIGQVQTLKL 87
Query: 74 DQE--------------------YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
+ + + + I T + G +
Sbjct: 88 APDRSHVLVGIQLNKEAAGFDAEDTRYWVVRPRIAASGISGLGTLLSGAYIGADPGASEQ 147
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ + + + R + T + I + + +
Sbjct: 148 SKKSFVGLEQPPIVTRDASGRQFVLHTNDLGSLDIGSPIFYRRIKVGQVVAYDLDADGRG 207
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
L + + H + ++ + I D+
Sbjct: 208 VTLRIFVNAPYDKFVTQTSRFWHASGFDMELNASGFKLHTQALATVVLGGIAFRDRDEDR 267
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK-- 291
+ + + +K D V T + + + G +D
Sbjct: 268 VSAPAKEGAEYALVEDESAAMKEPDGVPQTALLYFDQSLRGLQPGATVDFRGVVLGEVKS 327
Query: 292 -----MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
K++ + + + + + + L + +
Sbjct: 328 IGVEYDKARGEFRMPVVVQIYPERLGRRFQEETGEQRRSNAHLLRTLVKRGLRAQLRNGN 387
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF-SQSGL 405
+L I+ K + T + +++ + + I L
Sbjct: 388 LLTGQLYVAIDFFPKAKPAQIDPDKTPLELPTIPGSLDELQQQLSDIAGKLSKVPFDEIG 447
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERN 432
D+Q ++ L +T++ + +
Sbjct: 448 RDLQTTLKTLNKTLSTAEQTAARINND 474
>gi|226304398|ref|YP_002764356.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183513|dbj|BAH31617.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 343
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/309 (11%), Positives = 92/309 (29%), Gaps = 16/309 (5%)
Query: 1 MESK-NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ + + LF ++ + + F LS + V+GL+ + V
Sbjct: 1 MKVRPGQVIRLSLFCLTGIACASFVANTLSVPVRGSTDSYSFE---FTDVEGLNPGNPVT 57
Query: 60 FNGIPVGRIVGLFLDQEYPN--HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ +GR+ + ++ I L A +R + G Y+ L+
Sbjct: 58 MSGVRIGRVDSVAFADNGGGTSKAIVDVEIESQYSLESDVRAAVRYGDMLGARYLALTQD 117
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ------KIIEN 171
+ + + TP + N + +
Sbjct: 118 DSATTVSARQLEPGDTIPLAQTTPPINLTALMNGFKPLFAALQPEQVNTLTRSFVETFNG 177
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ +TT + I T+S+ L + +++ S D + +
Sbjct: 178 QGQAMTTLLDQIATMSSGLVDRQDVFAQLLTNMNTLLTSVDERQPELVGLLDGLNDLSTS 237
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSD----QVINTVHDVRETTQTFQEVGQKIDHLLSD 287
++ +L+ + ++ + TV + T ++ + + LL++
Sbjct: 238 VVGQNDQLVSLLDQGNRTVSSLAQIMAGSNGAFGQTVQQLESVTGSWIASTDEFNRLLAN 297
Query: 288 FSSKMKSKE 296
+
Sbjct: 298 LPQFADAAN 306
>gi|319791929|ref|YP_004153569.1| mammalian cell entry related domain protein [Variovorax paradoxus
EPS]
gi|315594392|gb|ADU35458.1| Mammalian cell entry related domain protein [Variovorax paradoxus
EPS]
Length = 164
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 43/117 (36%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ N VGLFV+ F + + + ++ GL ++V+
Sbjct: 1 MQRSNNDIWVGLFVLIGAAALLFLALQSANLLSLNFQKTYTVTARFDNIGGLKPQTAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + + + + ++ ++ I T GL G YI +
Sbjct: 61 AGVVVGRVESIAFN-DKAFQADVTLALQNRYSFPKDSSLKILTSGLLGEQYIGIEAG 116
>gi|299067838|emb|CBJ39049.1| paraquat-inducible protein B [Ralstonia solanacearum CMR15]
Length = 532
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/398 (8%), Positives = 101/398 (25%), Gaps = 23/398 (5%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L T + V F + VG++ +D + I + P T + R
Sbjct: 157 NDLGSLDTGAPVYFRRVRVGQVTSYDIDADGKG---VTLHIFVNAPFDRFVTRSSRFWNA 213
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+GI ++ K + + + + + +
Sbjct: 214 SGIDLKLDASGLKVDMQSLLTVALGGIAFQSPEDADRDPAPQNTEFQLVRNEAMALKDPE 273
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + ++ + + V I+ + + + +
Sbjct: 274 HVSQTVVMYFHRSLRGLTVGAPVEFKGINVGEIRSIGIHYSKERHEFVLPVTAVLYPTRF 333
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ ++ N +++ + + + + F E +
Sbjct: 334 GMDIRDDTAAHAIDDTRTQFDTLIRNGMRAQLKSASLLTGQQFVQLDFVEPADRGKTPPR 393
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ +N D E I +++ +
Sbjct: 394 FGLRERDGAYVFPTADNPTDDIEA-----------QIAGIVKKLNKVPFEQIGQDVHRAL 442
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + ++ N L + + R T E +
Sbjct: 443 NSLDATLKQTELLAKTVN-NDLAPQMKDTLAEARRTLETARQAFSEDAP--------LQR 493
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ ++ + ++ + + +R+P+ ++ G+ K +
Sbjct: 494 NARDTLEQVAKAAASVRVLTDYLDRHPEALIRGKAKDA 531
Score = 49.9 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 70/258 (27%), Gaps = 10/258 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V++ S+ GL+ + V F GI VG I + + H P+ T
Sbjct: 276 SQTVVMYFHRSLRGLTVGAPVEFKGINVGEIRSIGIHYSKERHEFV-------LPV---T 325
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T+ I + + +T F RA + + +
Sbjct: 326 AVLYPTRFGMDIRDDTAAHAIDDTRTQFDTLIRNGMRAQLKSASLLTGQQFVQLDFVEPA 385
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + E + T N I + Q+ + N+
Sbjct: 386 DRGKTPPRFGLRERDGAYVFPTADNPTDDIEAQIAGIVKKLNKVPFEQIGQDVHRALNSL 445
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ L K + ++ L + + ++ + + R+T + +
Sbjct: 446 DATLKQTELLAKTVNNDLAPQMKDTLAEARRTLETARQAFSEDAPLQRNARDTLEQVAKA 505
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ L ++
Sbjct: 506 AASVRVLTDYLDRHPEAL 523
Score = 41.1 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 24/77 (31%), Gaps = 5/77 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + ++R G V S +G+ + V++ + +G + + L
Sbjct: 13 LVPIVALAVGATLMTRVILARGAQITVT---FSSAEGIEAGKTRVKYKSVDIGVVKSVGL 69
Query: 74 DQEYPNHSLAKALIRPD 90
+ + D
Sbjct: 70 TDDRSGAV-VLIELTRD 85
>gi|111021672|ref|YP_704644.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110821202|gb|ABG96486.1| MCE family protein [Rhodococcus jostii RHA1]
Length = 351
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 98/295 (33%), Gaps = 8/295 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VG+ V+I + + G + GL T +V
Sbjct: 1 MKRERNPVQVGIIGVAIASMIVIATLQYDQLQFLSGGT-QYSAYF-EDAGGLMTGDAVTL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD++ H L I L +T A I+T + G + ++ L E
Sbjct: 59 AGVDVGKVAEVELDEQ---HVLVTFTIEDGIVLGDATEANIKTNTVLGRKSLAVTPLGYE 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + + +E + +++++ + EN L T +
Sbjct: 116 TMPVGSTIPLERTNSPYSLNDALGDLSNTVSELDTDEVNNALNAMSGAFENTPPELRTAL 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +S + + + +++ + ++ + + ++
Sbjct: 176 DGLTRLSESINSRDETLRQLLSRAENVTGILAERSGQINSLIVDGNQLFGELDRRRTAIS 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q++ NI S V + ++ T V + + S +
Sbjct: 236 QLIVNISAVSRQLT---GLVQDNEEQMKPTLDKLNSVVDVLQRNKDNISQALDGL 287
>gi|326333289|ref|ZP_08199536.1| virulence factor mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948933|gb|EGD41026.1| virulence factor mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 434
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 34/374 (9%), Positives = 111/374 (29%), Gaps = 12/374 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ +G+F ++ +R G + GL + V + G
Sbjct: 4 TRLVKRQLGVFACLTALALGLMVFTYARVPAMLGIGVYQVTAEFKDASGLYESALVTYRG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG++ L + P ++A + T + + A + + G Y+ L + K
Sbjct: 64 VKVGQVTDLEV---TPRAAVATLRLDDGTRIPGNVDAELHSTSAVGEQYVSLVSPSTTKA 120
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ R + + + +++ S ++ +++ T ++
Sbjct: 121 ALSAGDVLPTSRTVDMPQIAPVLDAVNHLLE--------SVPQRQTRNVLDQVDTGLGSS 172
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E + ++ + + +D T + + + ++
Sbjct: 173 SEDVGRLIEESSTLLDTAQQEVTSTTELIRALEPVLATQQEMAPQTVSSMSSLRALTKEL 232
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
N + + +T V + T + + ++ + + + +
Sbjct: 233 AANDADLRSLLRDGRTGLDSTAATVDDLQTTLPMLLDNLMVNGEVLNTYLPQLQQTLVVY 292
Query: 303 NIADST-SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + ++ + ++ + + +D E + K++ ++
Sbjct: 293 PATIGRLQQTVNPRAKEGDVKLDLRAGVNNPPSCTTGYLSTDDRRSPSEENVRKVDPLAH 352
Query: 362 LKENNSLFKDAQRA 375
+ S + A
Sbjct: 353 CETAPSDPSSVRGA 366
>gi|318059762|ref|ZP_07978485.1| secreted protein [Streptomyces sp. SA3_actG]
Length = 352
Score = 81.5 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+FV+ + ++ + G V GL VR +G+ VG + +
Sbjct: 23 VFVLVTGVATAVLGLSIANTG-VGGDTTTYKALFSD-VTGLIDGDGVRISGVKVGEVTDV 80
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + + D L +TTA+++ + G Y+ L
Sbjct: 81 RVV--DHRTAQVTFTVDRDRALPATTTASVKYLNMVGQRYVSLERG 124
>gi|226305216|ref|YP_002765174.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|229490720|ref|ZP_04384558.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|226184331|dbj|BAH32435.1| putative Mce family protein [Rhodococcus erythropolis PR4]
gi|229322540|gb|EEN88323.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 331
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 89/287 (31%), Gaps = 10/287 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + G + ++ + S ++L + G + GL + VR
Sbjct: 1 MSKRRSPAMAGAIGIFVVLLATLSAFFLDSL-PFVGAGSSYSAEFSE-AAGLKPGNEVRI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD + L + D + T+A+I+ + + G Y+ L +
Sbjct: 59 AGVKVGKVTSVDLDGD---RVLVDFKV-SDAWVGDQTSASIQIKTILGQKYLALDPRGTD 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + +++ S + + + ++
Sbjct: 115 NLDPKDRIPLERTTSPYDVVQAFSAAADTVGDIDTDQLAKSMETLSQAFSETPGDVRASL 174
Query: 181 ANIETISTVLANNISHIDKMM----HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ +S +A+ + K+ T+Q+ + L+ +
Sbjct: 175 DGVSRLSQTIASRDQDLQKLFAATGKTSQILADRNKEFTQLIRDGGLLVQELNNRQQAIS 234
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
Q + Q + + + + + + + +D
Sbjct: 235 QLLTGTQRVSQQLTGLVRDNEAAIGPALTQLNGVIDILKANNENLDK 281
>gi|134103286|ref|YP_001108947.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338]
gi|291004497|ref|ZP_06562470.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915909|emb|CAM06022.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338]
Length = 366
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/309 (9%), Positives = 97/309 (31%), Gaps = 8/309 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ + F+ L ++ + ++ G V+ G+ ++ V +
Sbjct: 1 MISRKVRLQIVAFLAIALVGVGYTSARYAGLDRLFGSRGYVVTMQLADTGGVFDNAEVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVGR+ + L + I T + A + + G Y++L
Sbjct: 61 RGVPVGRVGTMRLTHDG---VEVPLDIDSGTRIPADVEAVVALRSAVGEQYVDLRPRTDR 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +R P + + ++N ++ SK + + ++ ++ +
Sbjct: 118 GPYLRDGSVIAQERTQT---PLPVEHLMTNLDSFSKSV--PTDSLRTVVNELGTAFRDNG 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N++ + + + + T+ + + +++
Sbjct: 173 GNLQRVIDTTREFTTAAQQHLPQTKQLLADGKTVLATQNEQGSSIRSFSQDLRLLSEQLQ 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ +++ + ++ QV + + + + + + +
Sbjct: 233 RSDGDLRSVIQHAPPAAAQVSGLIRENDQLGPLLANLTSTSQLISAHVDGVEQLMTLYPA 292
Query: 301 LENIADSTS 309
+ ++S
Sbjct: 293 VVTASNSVM 301
>gi|83746045|ref|ZP_00943100.1| Paraquat-inducible protein B [Ralstonia solanacearum UW551]
gi|207742460|ref|YP_002258852.1| hypothetical protein RSIPO_00648 [Ralstonia solanacearum IPO1609]
gi|83727228|gb|EAP74351.1| Paraquat-inducible protein B [Ralstonia solanacearum UW551]
gi|206593850|emb|CAQ60777.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 547
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/397 (7%), Positives = 102/397 (25%), Gaps = 23/397 (5%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L T + V F + VG++ +D + I + P T + R +
Sbjct: 173 DLGSLDTGAPVYFRRVRVGQVTSYDIDADGEG---VTLHIFVNAPFDRFVTRSSRFWNAS 229
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
GI ++ K + + + + + + +
Sbjct: 230 GIDLKLDASGLKVDMQSLLTVALGDIAFQSPEDADRDPAPQNTEFQLVRNEAMALKDPEH 289
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + ++ + + V I+ + + + +
Sbjct: 290 VSQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSIGIHYSKERHEFVLPVTAVLYPTRFG 349
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + +N +++ + + + + F E +
Sbjct: 350 MAVRDDTAAHAIEDTRAQFDTLISNGMRAQLKSASLLTGQQFVQLDFVEPADRGKTPPRF 409
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ +N D + I +++ +
Sbjct: 410 GQRERDGTYVFPTADNPTDDIEA-----------QIAGIVKKLNKVPFDQIGQDVHRALG 458
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + ++ N L + + R T E + +
Sbjct: 459 SLDATLKQTEQLAKTVN-NDLAPQMKETLAEARRTLETARQTFSEDAP--------LQRN 509
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ + ++ + + +R+P+ ++ G+ K +
Sbjct: 510 ARDTLEQVAKAAASVRVLTDYLDRHPEALIRGKAKDA 546
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/258 (11%), Positives = 69/258 (26%), Gaps = 10/258 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V++ S+ GL+ + V F GI VG I + + H P+ T
Sbjct: 291 SQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSIGIHYSKERHEFV-------LPV---T 340
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T+ + + ++ + F RA + + +
Sbjct: 341 AVLYPTRFGMAVRDDTAAHAIEDTRAQFDTLISNGMRAQLKSASLLTGQQFVQLDFVEPA 400
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ E + T N I + Q+ + +
Sbjct: 401 DRGKTPPRFGQRERDGTYVFPTADNPTDDIEAQIAGIVKKLNKVPFDQIGQDVHRALGSL 460
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ L K + ++ + L + + ++ + + R+T + +
Sbjct: 461 DATLKQTEQLAKTVNNDLAPQMKETLAEARRTLETARQTFSEDAPLQRNARDTLEQVAKA 520
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ L ++
Sbjct: 521 AASVRVLTDYLDRHPEAL 538
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + ++R G V S +G+ + V++ + +G + + L
Sbjct: 28 LVPIVALAVGVTLMTRVILARGAQITVT---FSSAEGIEAGKTRVKYKSVDIGVVKDVGL 84
Query: 74 DQEYPNHSLAKALIRPD 90
++ + D
Sbjct: 85 TEDRSGAV-VMIELTRD 100
>gi|88808077|ref|ZP_01123588.1| possible ABC transporter [Synechococcus sp. WH 7805]
gi|88788116|gb|EAR19272.1| possible ABC transporter [Synechococcus sp. WH 7805]
Length = 309
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 87/306 (28%), Gaps = 17/306 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG +V + ++ WL + V + GL+ S V F
Sbjct: 1 MRRSVREALVGFSIVGAIAGFAGTMLWLRGV-RLGSETWTVQADF-QNAGGLADRSPVTF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI VG + + + + A I D L TA + L G +
Sbjct: 59 RGITVGTVRAIEVTPQS---VRATLEINQDSLKLPLPVTAIVSEASLLGGDAQVALKTKG 115
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + G + + + ++EK L
Sbjct: 116 TTLLKDAPSPKSRGCKNSGVLCDGDTIRGQSGAT-----------LTSVTASLEKLLDQA 164
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ V + + + ++N + L + + ID
Sbjct: 165 QKSNLIPELVKSTKQFGTTSQDASKFLDTADEAAQNVDALVQQLRDEVARAQPTIDNLNR 224
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+S N + + TV ++++T +++ +ID + D K +
Sbjct: 225 ATAEAASAAASINNLAKAFDNPETVSELKQTVTNAKQLTARIDSVGGDIEQLTKDPQFMQ 284
Query: 300 FLENIA 305
L ++
Sbjct: 285 GLRSVM 290
>gi|83858505|ref|ZP_00952027.1| ABC transporter substrate binding protein [Oceanicaulis alexandrii
HTCC2633]
gi|83853328|gb|EAP91180.1| ABC transporter substrate binding protein [Oceanicaulis alexandrii
HTCC2633]
Length = 157
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 3/123 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T +GL V+ + F IY + + G + SV L+ + VR G+PVG
Sbjct: 8 ETVLGLIVL--IAAGAFFIYAQGQVDDGSGADGYKLTARFSSVGDLTRGADVRVAGVPVG 65
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + LDQE + A+ + D + +TA I T GL G +++E+
Sbjct: 66 TVTAVRLDQETY-FAEAELELSGDIEIPTDSTAKIATAGLLGGSFVEIEPGGDMDVLAAG 124
Query: 127 IAT 129
Sbjct: 125 GEI 127
>gi|213420407|ref|ZP_03353473.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 125
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRTEPTYKVYATFDNIGGLKVRSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVEDISLDPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
>gi|78357026|ref|YP_388475.1| hypothetical protein Dde_1983 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219431|gb|ABB38780.1| conserved hypothetical protein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 343
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 21/103 (20%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG+FV L + S+ S ++ + ++ GSV GL+ S V F
Sbjct: 1 MSRFKNSFVVGVFVSGALIVAVASVALFG-SGRFFTETVQCVMFFKGSVKGLTIGSPVMF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALIRPDTPLYPSTTAT 100
G+ VG + + + + + S+ T
Sbjct: 60 RGVKVGSVSSISIYTDPEALEFTIPVVVDFDTRQMVVSSSAVT 102
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 13/148 (8%), Positives = 47/148 (31%), Gaps = 2/148 (1%)
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + L + ++ + ++ +E + L SQ
Sbjct: 193 NTLQAVDRLVSRPETQALPAELLALAQEARLAVSAAERLMRDTHAAVEPLGKKSQDVLGR 252
Query: 353 MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
+ + + + + ++ + + + + + L + + D++ +
Sbjct: 253 YGSLADTLKSQTEETAVA-MRASLDALEAAARRSEKAMEGV-EALTAPDAAIVRDMREAL 310
Query: 413 RKLQETVNHFDDCLNNFERNPQDIVWGR 440
R+L + ER+P+ ++ G+
Sbjct: 311 RELTGAARSLRVWADYLERHPEALIRGK 338
>gi|300705035|ref|YP_003746638.1| paraquat-inducible protein b [Ralstonia solanacearum CFBP2957]
gi|299072699|emb|CBJ44052.1| paraquat-inducible protein B [Ralstonia solanacearum CFBP2957]
Length = 547
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/397 (8%), Positives = 101/397 (25%), Gaps = 23/397 (5%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L T + V F + VG++ +D + I + P T + R +
Sbjct: 173 DLGSLDTGAPVYFRRVRVGQVTSYDIDADGEG---VTLHIFVNAPFDRFVTRSSRFWNAS 229
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
GI ++ K + + + + + +
Sbjct: 230 GIDLKLDASGLKVDMQSLLTVALGGIAFQSPEDADHDPAPQNTEFQLVRNEAMALKDPEH 289
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + ++ + + V I+ + + + +
Sbjct: 290 VSQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSIGIHYSKERHEFVLPVTAVLYPTRFG 349
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ V NN +++ + + + + F E +
Sbjct: 350 MTVRDDTAAHAVEDTRAQFDTLINNGMRAQLKSASLLTGQQFVQLDFVEPADRGKTPPRF 409
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ +N D + I +++ +
Sbjct: 410 GLRERDGAYVFPTADNPTDDIEA-----------QIAGIVKKLNKVPFDQIGQDVHRALG 458
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + ++ N L + + R T E + +
Sbjct: 459 SLDATLKQTEQLAKTVN-NDLAPQMKETLTEARRTLETARQTFSEDAP--------LQRN 509
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ + ++ + + +R+P+ ++ G+ K +
Sbjct: 510 ARDTLEQVAKAAASVRVLTDYLDRHPEALIRGKAKDA 546
Score = 50.7 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 29/258 (11%), Positives = 70/258 (27%), Gaps = 10/258 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V++ S+ GL+ + V F GI VG I + + H P+ T
Sbjct: 291 SQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSIGIHYSKERHEFV-------LPV---T 340
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T+ + + ++ + F RA + + +
Sbjct: 341 AVLYPTRFGMTVRDDTAAHAVEDTRAQFDTLINNGMRAQLKSASLLTGQQFVQLDFVEPA 400
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + E + T N I + Q+ + +
Sbjct: 401 DRGKTPPRFGLRERDGAYVFPTADNPTDDIEAQIAGIVKKLNKVPFDQIGQDVHRALGSL 460
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ L K + ++ + L + + ++ + + R+T + +
Sbjct: 461 DATLKQTEQLAKTVNNDLAPQMKETLTEARRTLETARQTFSEDAPLQRNARDTLEQVAKA 520
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ L ++
Sbjct: 521 AASVRVLTDYLDRHPEAL 538
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + ++R G V S +G+ + V++ + +G + + L
Sbjct: 28 LVPIVALAVGATLMTRVILARGAQITVT---FSSAEGIEAGKTRVKYKSVDIGVVKDVGL 84
Query: 74 DQEYPNHSLAKALIRPD 90
++ + D
Sbjct: 85 TEDRSGAV-VMIELTRD 100
>gi|300789434|ref|YP_003769725.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299798948|gb|ADJ49323.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 368
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query: 1 MESKNYYTSVGLFVVSILFF-SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ V LFVV + ++ + + V + P G+ T++ V
Sbjct: 1 MLTRFVRVQVTLFVVIAVVGVAYVGATYAGLDKVFFDRGYTVTAQFPT-GGGIFTNAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+P+GR+ L L A I T P+ T A + + G Y++L
Sbjct: 60 YRGVPIGRVGELRLTPAGM---EADLEIDSGTAPVPADTEAVVADRSAVGEQYVDLRPRT 116
Query: 119 KEKKTIFQIATERNQR 134
+ + +
Sbjct: 117 DGGPKLHEGSVITQAD 132
>gi|294816015|ref|ZP_06774658.1| Putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
gi|326444357|ref|ZP_08219091.1| putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
gi|294328614|gb|EFG10257.1| Putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
Length = 343
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 9/141 (6%)
Query: 1 MESKNYYTSVG---LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M ++ + +FV+ + ++ + G R V GL S
Sbjct: 1 MSRRSLAAPLAKSLVFVLVTTLATTVLALSIANTGV--GDTTSYRARFSD-VTGLIPGDS 57
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
VR G+ VG++ + + + + ++ L S TA+I+ + G YI+L
Sbjct: 58 VRIAGVKVGQVDAVKVA--DRRVAEVRFSVQRGRGLPASATASIKYLNMVGQRYIDLDRG 115
Query: 118 R-KEKKTIFQIATERNQRAMI 137
++ T R
Sbjct: 116 TGPVGASLPPGGTIPLDRTTP 136
>gi|326333400|ref|ZP_08199646.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948796|gb|EGD40890.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 350
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F+V + + G E V G++ VR +G+ VG + G+
Sbjct: 20 IFIVVTTLATALLAITIGNVT--FGQTDEYKAVFTD-VTGVNKGDDVRISGVKVGSVKGI 76
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + ++ + L +T ATI+ + L G Y
Sbjct: 77 EIS-DDARSAVVTFTVDRAQQLATTTEATIKYRNLIGQRY 115
>gi|33239772|ref|NP_874714.1| putative ABC transporter [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33237298|gb|AAP99366.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
Length = 281
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 34/116 (29%), Gaps = 6/116 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG ++ + WL + V GLS + V F
Sbjct: 1 MRRSFRDAIVGFSLIGGVVIFSGLTLWLKGL-KISSNTWTVFANF-ADASGLSEGTPVTF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELS 115
GI +G + + + AK I + L+ A I T L G
Sbjct: 59 RGIQIGSVKKIIFTSKD---VRAKIRINSNNVILFKPVYAKIETSSLLGGDAEVSM 111
>gi|42524507|ref|NP_969887.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein. [Bdellovibrio bacteriovorus HD100]
gi|39576716|emb|CAE80880.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein [Bdellovibrio bacteriovorus HD100]
Length = 458
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 54/346 (15%), Positives = 113/346 (32%), Gaps = 25/346 (7%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ VGL V+ + +S Y G + +P + GL +S+VR GI
Sbjct: 5 RAAEFKVGLMVIVVGSLIAVMSMQVSDDPSYLGRSKKAWFLLP-NAGGLVKNSAVRSAGI 63
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG I + L + I+ + PL S + I+ QG+ G +IE+
Sbjct: 64 PVGVIKDIRLQ---DGMARIDITIKSEVPLTTSASVEIKAQGILGDKHIEVYPGSPTDPP 120
Query: 124 IFQIATERN-----QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ A + + A S + + K+ + ++ I K + T
Sbjct: 121 LEDNAQILSIKDGAGMENLMAQVSDVASSLKEVAKNLKEATSEDGTRAHVLGRIVKNIET 180
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++ ++T + I I +H + +++ +K
Sbjct: 181 LTGDLAQMTTENKDKIGDIVDDIHGI------------TANLQEVMNDKSDSGLKETWKK 228
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
++ ++N+ + K + + D + + + + ID L S + +
Sbjct: 229 LSNTVKNLDDITTRINKGEGALGKLISDEQTS----ENLTSAIDGLGGMLDSANRIQTAF 284
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
F + +S I + R I ++ +
Sbjct: 285 EFRGEYLNEVGATKSYIGVQIQPGLDRYYYIGVVDDPAGVVETTKT 330
>gi|145223100|ref|YP_001133778.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215586|gb|ABP44990.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 564
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/359 (11%), Positives = 100/359 (27%), Gaps = 14/359 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F ++ + I+ ++ V + +P S GL S+V
Sbjct: 1 MLTRFVRNQLIIFTIASIVGVAVMIFSYMQVPTLLGIGRLAVTLELPAS-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VG++ + L + + A + + A +R+ G Y+EL
Sbjct: 60 YRGVQVGKVTEVNLTENG---AEAILSLDTSPEIPADLRAEVRSVSAVGEQYVELLPQTD 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNA---------ENTSKKISDSSRHIQKIIE 170
+ + + I + +S + + +
Sbjct: 117 DGPFLEDGSRIPVSNTTIPQQVGPMLDQMSALVGSLPKDRIPDLLDETFKAFNGAGPEFG 176
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ TT A++ IS I ++ + T + + +
Sbjct: 177 SLLDSATTLAADMNGISEQTRALIDDSGPLLESQAETTDAIRTWARSLNGISAQVVQNDP 236
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
LQ+ + + N + ++ + V +T T+ +++ L +
Sbjct: 237 QVRALLQQGPGFAQEVSSLLNQVKPTLPILLANMSTVGQTLLTYNPALEQLLVLFPGIIA 296
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+S + + E + K
Sbjct: 297 AQQSFGLPQNSPTGLPTGDFALTISDPNPCTVGFLPSSQWRAPEDETTIDTPDGLYCKL 355
>gi|262373544|ref|ZP_06066822.1| toluene tolerance efflux transporter [Acinetobacter junii SH205]
gi|262311297|gb|EEY92383.1| toluene tolerance efflux transporter [Acinetobacter junii SH205]
Length = 224
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S+ +VG+FV+ FF +S + + + +V+GL + V
Sbjct: 1 MKSRTSELAVGIFVIIFGIALFFLAMKVSGLVGTNLRDSYSMTAQFDNVNGLKPRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + K +
Sbjct: 61 SGVTIGRVESITLDPIT-RLATVKFELDGKL 90
>gi|295134583|ref|YP_003585259.1| MCE family protein [Zunongwangia profunda SM-A87]
gi|294982598|gb|ADF53063.1| secreted MCE family protein [Zunongwangia profunda SM-A87]
Length = 316
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/320 (11%), Positives = 98/320 (30%), Gaps = 7/320 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + + + F +L N D + V+GLS S+V
Sbjct: 1 MKI-SNEVKTAILAIVAIVLLIFGYSFLKGKNLLDSSRTFYAVY--DEVEGLSPSSAVTI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG++ + L + D ++TA + G+ G + + +
Sbjct: 58 NGLKVGQVTDINFL-NKQGQLLVTFTVEKDFNFSKNSTAQVYGGGIIGGKSLAIVPEYES 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
T ++ +N ++ + ++ S+ + I ++ TT
Sbjct: 117 GSIAKSGDTLQSNVEEGIM--ELVNERLTPLQQKLERTVVSADSLLTSINDLLNDSTTYN 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N + V ++ + TF+ + + + + ++ +
Sbjct: 175 INNTFKNLNQTMRSLKSTSGALEGIVQGNAENLNQTFDNLNTMSGNFKTVSDSLKAINLG 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
QI ++++ +F +D + N +V +D ++ + +
Sbjct: 235 QITDDLETVVADFRGIADNL-NNGEGTAGKLLNDDKVYNNLDRATKQLEELLQDIKLNPK 293
Query: 301 LENIADSTSNMRSSISAIRE 320
++
Sbjct: 294 RYVHFSVFGKNPGPYDEPKD 313
>gi|149372819|ref|ZP_01891840.1| hypothetical protein SCB49_12689 [unidentified eubacterium SCB49]
gi|149354516|gb|EDM43081.1| hypothetical protein SCB49_12689 [unidentified eubacterium SCB49]
Length = 315
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 42/119 (35%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + G+ + + F +L +N + + +V+GL+ + V
Sbjct: 1 MKI-SREVKTGILAIGAILLFIFGYSYLQGTNLLEENRTFFVKY--DNVEGLAKSAPVTI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
NG VG++ + ++ + + + D + I + + G + +
Sbjct: 58 NGFVVGKVTDIDF-EDTSGRLVVEFNVENDFDFSDKSVVRIYSANIMGGKSLGIFPDYS 115
>gi|260432984|ref|ZP_05786955.1| toluene transport system Ttg2C protein [Silicibacter
lacuscaerulensis ITI-1157]
gi|260416812|gb|EEX10071.1| toluene transport system Ttg2C protein [Silicibacter
lacuscaerulensis ITI-1157]
Length = 150
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 8/136 (5%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPM--AEVIIRIPGSVDGLSTDSS 57
M + N VG V+ + + S+S + E+ S++G+ +
Sbjct: 1 MSTHNMTEVLVGGVVL---ACAIGFGVYASQSTGWSQDTSGYELSASF-RSLEGVGIGTD 56
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
VR G+ +G + + L+ E + + D + + I ++GL G ++EL
Sbjct: 57 VRLAGVKIGTVTDVKLNPETYR-ADTTISVAEDILIPDDSAIVISSEGLLGGNFVELMPG 115
Query: 118 RKEKKTIFQIATERNQ 133
E Q
Sbjct: 116 GSPFYFEPGDQIEDTQ 131
>gi|255319834|ref|ZP_05361039.1| toluene tolerance efflux transporter [Acinetobacter
radioresistens SK82]
gi|262380366|ref|ZP_06073520.1| toluene tolerance efflux transporter [Acinetobacter
radioresistens SH164]
gi|255303153|gb|EET82365.1| toluene tolerance efflux transporter [Acinetobacter
radioresistens SK82]
gi|262297812|gb|EEY85727.1| toluene tolerance efflux transporter [Acinetobacter
radioresistens SH164]
Length = 220
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 37/91 (40%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S+ +VG+FV+ FF +S + + + +V+GL + V
Sbjct: 1 MKSRISELAVGIFVILFGIALFFLAMKVSGLAGTNLRDSYEMSAQFDNVNGLKPRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 61 SGVTIGRVTDITLDP-VSRLAKVDFELDGKL 90
>gi|213163394|ref|ZP_03349104.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213646982|ref|ZP_03377035.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289825821|ref|ZP_06544989.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|322626809|gb|EFY23606.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322643354|gb|EFY39918.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322664168|gb|EFY60366.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322675668|gb|EFY71741.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322682304|gb|EFY78327.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|323230325|gb|EGA14444.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
Length = 170
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 48/134 (35%), Gaps = 2/134 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++ L + F + + ++ GL S VR G+ VGR+ + L
Sbjct: 1 MLVALLAALFVCLKAANVTSMRTEPTYKVYATFDNIGGLKVRSPVRIGGVVVGRVEDISL 60
Query: 74 DQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
D + I + +++ +IRT GL G Y+ L+ ++ + I + +
Sbjct: 61 DPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTSILKDGS 119
Query: 133 QRAMITATPSGINY 146
+ +
Sbjct: 120 TIQDTKSAMVLEDM 133
>gi|169631588|ref|YP_001705237.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243555|emb|CAM64583.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 348
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 95/284 (33%), Gaps = 10/284 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T +G ++++ ++ + + L + GIPV
Sbjct: 19 NKTWLGFIAIAVIASLIGAMLLIKALGL---GYTSYTAEFVQAAS-LRPGQPITVAGIPV 74
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + L + H A +R D L T A+IR + G Y++L +
Sbjct: 75 GNVTSMKLVGD---HVEAGLKVRDDIRLGKDTKASIRVTTILGSRYLDLRPRGS--AALP 129
Query: 126 QIATERNQRAMITATPSGINYFISNAEN-TSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + + E K++ S + ++ + + + NI+
Sbjct: 130 GKTIDLAHTEVPYDLQAALAGATNTFEQVDFDKVAQSLTVLGTQLQGLPDVVPRAMENIQ 189
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++S+V+A+ + ++ +T+ + + + + + +L+
Sbjct: 190 SLSSVIADRRDQLGTLLKSTEKVTSTLRRQQSGIGVLINQGQDILEEIVTRRNTFHAMLQ 249
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ K Q ++ + +T ++ K D LL
Sbjct: 250 SFTNLVEQLSKVVVQDRAQLNAMLKTAHELSDMLGKHDDLLRSL 293
>gi|325287501|ref|YP_004263291.1| Mammalian cell entry related domain-containing protein
[Cellulophaga lytica DSM 7489]
gi|324322955|gb|ADY30420.1| Mammalian cell entry related domain protein [Cellulophaga lytica
DSM 7489]
Length = 321
Score = 81.1 bits (197), Expect = 3e-13, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 3/125 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+ V+ + +L + +D + V GL + V NG
Sbjct: 4 SRELKTGIIVIGGILLFILGFSYLKATPLFDNSKTFYAVY--DDVGGLQPGTQVSINGFS 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + ++ + + D ++ A + G+ G I++ + K
Sbjct: 62 VGKVNDIRF-KDKTGKLMVTFTVDSDFQFSKNSIAELYDTGIIGGKGIQIIPVFDNAKMA 120
Query: 125 FQIAT 129
T
Sbjct: 121 ESGDT 125
>gi|326333293|ref|ZP_08199540.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948937|gb|EGD41030.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 343
Score = 81.1 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/341 (12%), Positives = 97/341 (28%), Gaps = 8/341 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVII-RIPGSVDGLSTDSSVRF 60
++ G+F L + YW+ P V + +V GL SVR
Sbjct: 10 RERSDLIKFGIF----LVVAALFTYWVGVVTAAHRPGDRVTYDAVFANVSGLQKGDSVRI 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ L + ++ + D L ST AT++ + L G ++LS +
Sbjct: 66 AGVDVGKVTALAVQRD--ATVRVSFDVPRDQKLNASTEATVQYRNLIGDRIVQLSRPDPD 123
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I T + + + +I+ ++ +
Sbjct: 124 ARPIKAGDTIPISQTRPALDLDLLLNGFKPLFAGLAPAQIN-AFSGDLIKILQGQSSAIS 182
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ +++ + + + + + + + + Q+
Sbjct: 183 TLVQRAASLTTTLGNRQELIGEVIRNLNTVVGTLDDKRETIQALIDQFSKLLDGLEQQDT 242
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
QIL+ + ++ V D+ + I+ + ++
Sbjct: 243 QILDAAAQTDRFARDAASLVEAGREDLAADLTQLTKTANGINQEQATLQQVLQKLPNHYA 302
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
S N + I + I +
Sbjct: 303 AIQNTASYGNYFNFFLCGVRIQTEATITTPWIMSDTQRCKR 343
>gi|300726802|ref|ZP_07060232.1| mce family protein [Prevotella bryantii B14]
gi|299775915|gb|EFI72495.1| mce family protein [Prevotella bryantii B14]
Length = 300
Score = 81.1 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/289 (14%), Positives = 89/289 (30%), Gaps = 6/289 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + L ++ + FF I +L N + I ++ GL + +
Sbjct: 1 MKFFTNEVKIALVAIAGVVILFFGINFLKGKNLFANANTYYIT--FDNIMGLGASTPIYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + + D + + + TTA I + L G T I L +
Sbjct: 59 DGFKVGTVKNIVFDYGELGPIKIEIELNQAMRVPVGTTAEID-KDLMGNTQINLLIADNK 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + + A T + I E K+ + I+ + +
Sbjct: 118 SKWLSPGDIISGKVAEGVMTKAA--GLIPEVEKMMPKVDSILDRLNMILADPNIGKSLGN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + ++ + V + + + L L + A +Q++N
Sbjct: 176 IQQTTANLAVSTQELNTLLRGLNHSVPGMINKANGVLDNTQTLTGKLADVDVAGTMQQIN 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
L N + + + + ++D + D L+ D
Sbjct: 236 ATLANAKEFTEKLNSNQGSLGKLMNDPS-LYNHLNATIRDADSLMIDLK 283
>gi|262203804|ref|YP_003275012.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262087151|gb|ACY23119.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 476
Score = 81.1 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/283 (14%), Positives = 97/283 (34%), Gaps = 14/283 (4%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ ++ + +F + + IY++ + + V + +P S GL +++V
Sbjct: 1 MKITRFVRIQLIIFAIVTVIAMVAMAIYYIRVPSMFGVGSYRVELNLPSS-GGLYENANV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
F G+ VG++ + L E A+ I + S A++R+ G ++E +
Sbjct: 60 SFRGVNVGKVKAVRLTDEG---VQAELTIDNSAQIPESAKASVRSVSAIGEQFVEFTPPP 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + P I+ + A+ +K+ D+ K+ +++ T
Sbjct: 117 GGGE---GATLHDGSQVSSRDVPVEISSMLDQADALLQKVGDT-----KLRSLMDEAFTA 168
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
E + +L + +D+ T T D +
Sbjct: 169 FNGTGEALQRLLDSMALFVDEANKNTDTTISLVDQGGQLLATQSRTADDIRAWTRDVTAF 228
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+Q+ N ++ K V ++ +++ + +
Sbjct: 229 TDQLRANRPEITDILDKGPTTVSDSEQLFASMNESWPMLVSNL 271
>gi|183220170|ref|YP_001838166.1| hypothetical protein LEPBI_I0758 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189910290|ref|YP_001961845.1| ABC transporter periplasmic binding protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167774966|gb|ABZ93267.1| Periplasmic component of an ABC transporter complex [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778592|gb|ABZ96890.1| Hypothetical protein; putative signal peptide [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 315
Score = 81.1 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 61/179 (34%), Gaps = 29/179 (16%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
Y VG+FV+ F + + + + SV GL S V+ G+ VG
Sbjct: 8 YFKVGVFVLISFFTLILFLIVFT-AGNIFQRSVSLETYFDESVQGLDIGSPVKHRGVKVG 66
Query: 67 RIVGLFLDQEYP-------------NHSLAKALIRP--------------DTPLYPSTTA 99
+ + Q + L K + + +
Sbjct: 67 TVQEITFVQNEYADKLNDDTALRYGRYVLIKMSVPDFVKGVYGNNLKKTVERMIKSGLRV 126
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ +QGL G Y+E+ L EK I E + I + PS I+ F ++ + +K+
Sbjct: 127 RLASQGLTGTAYLEVDYLNPEKNPPLSIEWEP-KTVYIPSAPSTISRFTASVDKFFEKV 184
>gi|318075807|ref|ZP_07983139.1| secreted protein [Streptomyces sp. SA3_actF]
Length = 790
Score = 81.1 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+FV+ + ++ + G V GL VR +G+ VG + +
Sbjct: 461 VFVLVTGVATAVLGLSIANTG-VGGDTTTYKALFSD-VTGLIDGDGVRISGVKVGEVTDV 518
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + + D L +TTA+++ + G Y+ L
Sbjct: 519 RVV--DHRTAQVTFTVDRDRALPATTTASVKYLNMVGQRYVSLERG 562
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 85/282 (30%), Gaps = 16/282 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIPVGR 67
G+ + + + + + + D P ++ GSV + + V+ G+ VG+
Sbjct: 8 LAGIAFLVVAALLIWLAVAVYQKDFSDDPR---VVVETGSVGNEMHIGAEVKLRGVVVGQ 64
Query: 68 IVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEK-KTI 124
+ + ++ + ++P + A + L G Y+ L + +
Sbjct: 65 VRAIDASRQG---ARLTLAMKPGALKSIPDDVRAQMLPTTLFGERYVALVADTSKPGTPL 121
Query: 125 FQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTT 178
A R+ + + S +S S+ + + + + LT
Sbjct: 122 GAGAVIPQDRSANAIELQQVLDHTLPLLTAVQPQKLSATLSAVSQALDGRGDKLGETLTE 181
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
A+++ + L + +++ + V ++ + ++
Sbjct: 182 LDAHLKRFNPELPALNEDLKQLVTVSHVYADAAPGIVDALHDFTTTSGTLAEKESDLSAA 241
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + D +I R T Q E +
Sbjct: 242 YAGTTRAAEDVDGFLRANKDTIIRLSTTSRGTLQLLAEYSAE 283
>gi|119717046|ref|YP_924011.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119537707|gb|ABL82324.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 329
Score = 81.1 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 88/291 (30%), Gaps = 12/291 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+G V ++ + + LS+ + G GL + V+ GI
Sbjct: 7 ARVLRMGAITVVVMLLVLAAAFNLSQFPGFKGGTYRAE---FSDASGLHRGNMVQVGGIR 63
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VGR+ + L E N L + + A+I L G Y++L +
Sbjct: 64 VGRVQDVSL--ENSNTVLVTFEVDHGVEFGTDSRASIEVLNLLGEKYLDL-------QPA 114
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + T S + + T+ + +++ ++ + I
Sbjct: 115 GSGQLGEDDVIPVGRTESAYDIVGVFGDLTTTTERIDTDRLKRALDVVADTTNQAAPEIR 174
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ +A + Q SS + L + ++V + +
Sbjct: 175 SSFRGIARLSRTVASRDEQIQALLKSSQGVSKVLADHSLDLVDLMQHSDLVFREVQRRKQ 234
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + Q+ D + + + LL+ ++KS
Sbjct: 235 AVHLLLVSARSLARQLRGVAEDNQAQIAPALQEVDDLLALLNGKEKELKST 285
>gi|315443557|ref|YP_004076436.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261860|gb|ADT98601.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 564
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/359 (10%), Positives = 98/359 (27%), Gaps = 14/359 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F ++ + I+ ++ V + +P S GL S+V
Sbjct: 1 MLTRFVRNQLIIFTIASIVGVAVMIFSYMQVPTLLGIGRLAVTLELPAS-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VG++ + L + + A + + A +R+ G Y+EL
Sbjct: 60 YRGVQVGKVTEVNLTENG---AEAILSLDTSPEIPADLRAEVRSVSAVGEQYVELLPQTD 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNA---------ENTSKKISDSSRHIQKIIE 170
+ + + I + +S + + +
Sbjct: 117 QGPFLEDGSRIPVSNTTIPQQVGPMLDQMSALVGSLPKDRIPDLLDETFKAFNGAGPEFG 176
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ TT ++ IS I ++ + T + + +
Sbjct: 177 SLLDSATTLAEDMNGISEQTRALIDDSGPLLESQAETTDAIRTWARSLNGISAQVVQNDP 236
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
LQ+ + + N + ++ + V +T T+ +++ L +
Sbjct: 237 QVRALLQQGPGFAQEVSSLLNQIKPTLPILLANMSTVGQTLLTYNPALEQLLVLFPGIIA 296
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+S + E + K
Sbjct: 297 AQQSFGLPQNSPTGLPMGDFALTISDPNPCSVGFLPSSQWRSPEDETTIDTPDGLYCKL 355
>gi|226304165|ref|YP_002764123.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183280|dbj|BAH31384.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 336
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 6/119 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K GLF + + + L N G ++ + GL T S V+
Sbjct: 1 MSVKKSLIRFGLFAALSILATVVVVSTL--INPVSGSSSQYRAVFV-NASGLVTGSDVQI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + L ++ + + A +R L G I + +
Sbjct: 58 AGVRVGRVDSVELVNN---QAVVGFELESTQRIPTDGRAVVRYADLLGARTISIEPGQG 113
>gi|253700840|ref|YP_003022029.1| hypothetical protein GM21_2221 [Geobacter sp. M21]
gi|251775690|gb|ACT18271.1| Mammalian cell entry related domain protein [Geobacter sp. M21]
Length = 556
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/404 (9%), Positives = 117/404 (28%), Gaps = 25/404 (6%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ V L T S + F + VG+++G LD++ K IR +
Sbjct: 171 VLHSAEVGSLDTGSPIFFRRMQVGQVIGTELDRDGKG-VTVKIFIRS----PYDKFIKVN 225
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
T T+ + N +M++ GI++ + + + ++
Sbjct: 226 T---------YFWHASGIDLTLSASGVKVNTESMVSILLGGISFEVPEGKEDASPAPPNT 276
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+ + + + ++ + + +
Sbjct: 277 IFSLYATRDDAAKHSAAVEKFVLVFKESVRGLTVGAPVDLRGVTVGEVTKINVALDRRGA 336
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
T ++ D + + + H R ++ + ++
Sbjct: 337 DFTVPVEIQFYPDHLLAGGNSQEDAPETGDRTLRRQLDEMVAHGFRAQIKSASLLTGQL- 395
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
++ + S+ +++ + + I + +E I +
Sbjct: 396 --YVALDFVPGARAAKINWGADPPRFPTVPGSMEKLQKNLIEIVQRIEKLP-LEQIAGDA 452
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ + + + + + +L +A+ + R +++ + + L S
Sbjct: 453 GTTIRSLDSTLKSADQLLKNMD-RTLVPEARSVLAESRQAIDEVKKTLAEARQTLGGASG 511
Query: 403 SGLND------IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D +++ +R++ + E++P+ ++ G+
Sbjct: 512 VLAPDAPVQVDLRDTMREVSRAAQSLRVLGDYLEQHPETLIRGK 555
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 3/56 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPDTPL 93
++ SV GL+ + V G+ VG + + + + + PD L
Sbjct: 297 FVLVFKESVRGLTVGAPVDLRGVTVGEVTKINVALDRRGADFTVPVEIQFYPDHLL 352
Score = 39.9 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 29/439 (6%), Positives = 108/439 (24%), Gaps = 16/439 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
++ I+ + + I + +GL + +++ + +G + +
Sbjct: 31 IIPIVAALIGLSIAVKAYIDRG----QAITITFKTGEGLEAGKTKLKYKDVMIGEVKSIA 86
Query: 73 LDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELST--LRKEKKTIFQIA 128
+ +H + A + D + T + ++G L+T +
Sbjct: 87 IS-NDRSHVVVTAEVTKDARGLMVKDTRFWVVRARISGGNVSGLNTLLGGSYIGVEAGSS 145
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
TE + + +P ++ + + S I + I
Sbjct: 146 TEAREEFIGLESPPAVSVDVPGRQFVLHSAEVGSLDTGSPIFFRRMQVGQVIGTELDRDG 205
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
I + + + + E +
Sbjct: 206 KGVTVKIFIRSPYDKFIKVNTYFWHASGIDLTLSASGVKVNTESMVSILLGGISFEVPEG 265
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + + + + + V + + + + T
Sbjct: 266 KEDASPAPPNTIFSLYATRDDAAKHSAAVEKFVLVFKESVRGLTVGAPVDLRGVTVGEVT 325
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ ++ +I + + ++ D+ + + + + +
Sbjct: 326 K-INVALDRRGADFTVPVEIQFYPDHLLAGGNSQEDAPETGDRTLRRQLDEMVAHGFRAQ 384
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
K A + + + + + +++ + + +
Sbjct: 385 IKSASLLTGQLYVALDFVPG-----ARAAKINWGADPPRFPTVPGSMEKLQKNLIEIVQR 439
Query: 429 FERNPQDIVWGREKGSVKI 447
E+ P + + G +++
Sbjct: 440 IEKLPLEQIAGDAGTTIRS 458
>gi|262274364|ref|ZP_06052175.1| paraquat-inducible protein B [Grimontia hollisae CIP 101886]
gi|262220927|gb|EEY72241.1| paraquat-inducible protein B [Grimontia hollisae CIP 101886]
Length = 529
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 34/402 (8%), Positives = 105/402 (26%), Gaps = 28/402 (6%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTAT 100
++ LS V + G VGR+ + D E S + P D + +T
Sbjct: 142 VVLTHNEAGKLSVGDPVLYEGFTVGRVEQVSFDVEKRKASYQLFVFAPYDGLITSNTNFW 201
Query: 101 IRTQ-GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + L L + + T P + +++
Sbjct: 202 MDSGISLQMSAEGFEVQLGSLESMLKGGVTFGAIDDDEYGIPISQQMTQFRLFDDLQQVR 261
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + + + + S + + T +K
Sbjct: 262 EGMYNEYLEFVMLFDESVRGLKPHAPVEYRGLPIGSVVKVPLRTRSPEQQLDSNKVPVLV 321
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+L + + + +++ Q +K+ + V ++ +
Sbjct: 322 RIELGRIYQGIQDSDLPKLRDKLEGEFQRGLRGTLKTGNLVTGALYIDVDY--------- 372
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ + + + TI ++ +
Sbjct: 373 -----HENTEALTLKPFDGYAVFPTVHGGFAEVQKQIIDLMKKVNGLPLEDTIASLNSAL 427
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + + S ++ + + + +L + ++ + +T +
Sbjct: 428 KASERTLRAAENVASNVDALLSQNDTQTLPSEMKQVLQQLEETLAGFDAK---------- 477
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+ D+ + +++L + + + P +V+G +
Sbjct: 478 --STLYQDMASTLQELNKVLTEVRPVVRQLNEKPNALVFGSD 517
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/205 (16%), Positives = 59/205 (28%), Gaps = 17/205 (8%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH--------SLAKALI 87
E ++ SV GL + V + G+P+G +V + L P L + +
Sbjct: 266 NEYLEFVMLFDESVRGLKPHAPVEYRGLPIGSVVKVPLRTRSPEQQLDSNKVPVLVRIEL 325
Query: 88 --------RPDTPLYPSTTATIRTQGLAG-ITYIELSTLRKEKKTIFQIATERNQRAMIT 138
D P +GL G + L T + TE
Sbjct: 326 GRIYQGIQDSDLPKLRDKLEGEFQRGLRGTLKTGNLVTGALYIDVDYHENTEALTLKPFD 385
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
AE + I + +E+ L + + E N S++D
Sbjct: 386 GYAVFPTVHGGFAEVQKQIIDLMKKVNGLPLEDTIASLNSALKASERTLRAAENVASNVD 445
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDL 223
++ S+ K + +
Sbjct: 446 ALLSQNDTQTLPSEMKQVLQQLEET 470
Score = 36.8 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 13/90 (14%), Positives = 30/90 (33%), Gaps = 6/90 (6%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
++ +L + + VI + DG+ + ++ + VG I +
Sbjct: 3 IIPLLALLMGAWMLFQHISTTG----PVITLTLSTADGIEAGKTEIKALNVKVGVITDIK 58
Query: 73 LDQEYPNHS-LAKALIRPDTPLYPSTTATI 101
L +Y + A+ + L T +
Sbjct: 59 LSDDYDHIIAKAQMSTDAERMLREDTRFWV 88
>gi|148238593|ref|YP_001223980.1| ABC-type transport system, periplasmic component [Synechococcus sp.
WH 7803]
gi|147847132|emb|CAK22683.1| ABC-type transport system, periplasmic component [Synechococcus sp.
WH 7803]
Length = 310
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/307 (14%), Positives = 88/307 (28%), Gaps = 19/307 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG +V + ++ WL + V + GL+ S V F
Sbjct: 1 MRRSVREALVGFSLVGAIAGFAGTMLWLRGV-RLGSETWTVQADF-QNAGGLANRSPVTF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIR-PDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI VG + + + P A I D L A + + L G
Sbjct: 59 RGITVGTVRAIDV---TPMAVRATLEINQDDLQLPLPVKAVVSSASLLG--------GDS 107
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + +P N S I S + + L
Sbjct: 108 QVELLTTGTP----VPKNAPSPKARNCKNSGVLCEGATIPGQSGASLTSVTASLEQLLDQ 163
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI-TDLITSLDKMIKAIDLQK 238
I ++ + ++ + + + + L + + ID
Sbjct: 164 AQKSNLIPQLVESTKQFGTTSEDASKFLDTADVAAQNVDALVQQLRAEVSRAQPTIDNLN 223
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+S N + + TV D+++T +++ +ID + D ++
Sbjct: 224 RATAEAAAAAASINNLAKAFDNPETVSDLKQTVTNAKQLTARIDAVGGDIEQLTDDRQFM 283
Query: 299 AFLENIA 305
L ++
Sbjct: 284 QGLRSVM 290
>gi|331699192|ref|YP_004335431.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953881|gb|AEA27578.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
Length = 321
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 94/304 (30%), Gaps = 10/304 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
L V+ I+ + + + + G GL V G+ GR+ +
Sbjct: 10 LAVLGIVVLLVGGLLAFNGPSLFGG--TTYSAEFTE-AAGLQPGDKVTVAGVETGRVRSV 66
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
LD + H L + D + TTA I + L G Y+ L +
Sbjct: 67 TLDGD---HVLVTFQVD-DAWIGDRTTALIGIRTLLGAKYLALDPQGTADLDPDTVIPRS 122
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + + + +++ S + + + + +ST +A
Sbjct: 123 RTASPFDVVEAFNGLSGTLDQLDTTQLAKSLTTLADTFRGSAPDVRGALDGLSRLSTTIA 182
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ + ++ T + + D + S ++ Q+ + I + +
Sbjct: 183 SRDDQLRSLLKGT---NTLATTLADRRGDIDSLLSDGNLLLGELQQRRDAIATLLTGTRA 239
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ V + +R T ++ +V + + S ++ + L A +
Sbjct: 240 LATQLRGLVADNTDRLRPTLESLDKVADVLQRNQDNLSQVLQKEAVFVRLFTNAVGNGHW 299
Query: 312 RSSI 315
+
Sbjct: 300 FDNY 303
>gi|91783687|ref|YP_558893.1| putative paraquat-inducible transmembrane protein, PqiB
[Burkholderia xenovorans LB400]
gi|91687641|gb|ABE30841.1| Putative paraquat-inducible transmembrane protein, PqiB
[Burkholderia xenovorans LB400]
Length = 539
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/449 (11%), Positives = 116/449 (25%), Gaps = 51/449 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-----------------IRIPGSVDG 51
VG VS + Y + + P E I S+
Sbjct: 120 RVGASGVSGIGTLLSGAYIGVDAGRSKEPRTEFAGLETPPPITADQKGHRFILHGDSLGS 179
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + + VG++ G+ LD++ + P R +G+
Sbjct: 180 IDIGSPIFYRRMQVGQVYGIALDKDGTG---VTMQVFVAAPYDQYVGTNSRWWHASGVNV 236
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S A A T + + + ++
Sbjct: 237 RLDSAGFVVNTQ-SLAAILVGGLAFQTPPGQQMGAQAAEKTDFRLASDETDAMRAPDGVP 295
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + + + + V T DL +
Sbjct: 296 VRAVMNFNQSLRGLSVGAVVDFRGIVLGQVTDIGVEYDPQTQSFTMPVTLDLYPDRLRRR 355
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + ++ + + + T + + ++ K + D ++
Sbjct: 356 ARSATMPQARTSASHELLRHLVERGLRGQLRTGNLLTGQLYIALDIFPKAAPVKFDVDAE 415
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
T + + + I SNLN S +
Sbjct: 416 PIELPTIPNTLDALQVQVADIARKLDRVP--------------FDQIGSNLNTSLKNADA 461
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L +++N N + A+ + R T + +D+
Sbjct: 462 LFNRLN--------NEVVPQARDTLAAARQTFGSAEAALQR--------DSPLQSDVHQA 505
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T+ + + ER+P+ +V G+
Sbjct: 506 LQELTRTLQSLNALADYLERHPESLVRGK 534
>gi|183984673|ref|YP_001852964.1| MCE-family protein [Mycobacterium marinum M]
gi|183177999|gb|ACC43109.1| MCE-family protein [Mycobacterium marinum M]
Length = 543
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 44/134 (32%), Gaps = 3/134 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ + +F + + W ++ G + + GL S+V +
Sbjct: 1 MLTRFVRIQLAIFAIVGMVGVAVMAVWYIQAPTLLGIGKMTVTLELPATGGLYRFSNVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ L L + A + + A +R+ G Y++L
Sbjct: 61 RGVQIGKVTALGLTSSG---AKATLALDASPKIPADLKAEVRSISAVGEYYVDLRPRTDS 117
Query: 121 KKTIFQIATERNQR 134
+ + R
Sbjct: 118 PPYLHDGSVIARDR 131
>gi|42520910|ref|NP_966825.1| ABC transporter, periplasmic substrate-binding protein, putative
[Wolbachia endosymbiont of Drosophila melanogaster]
gi|99034587|ref|ZP_01314551.1| hypothetical protein Wendoof_01000637 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|42410651|gb|AAS14759.1| ABC transporter, periplasmic substrate-binding protein, putative
[Wolbachia endosymbiont of Drosophila melanogaster]
Length = 151
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 52/132 (39%), Gaps = 4/132 (3%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + GLFV+ F F + + I + + +G+ SV
Sbjct: 1 MR-RSNILEITAGLFVLIFTIFLIFFAIDKLSYIKKNYKDCNKIYGLFANANGIGVGDSV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ +G+ VG I G+ LD+ + I D L ++A I + G+ G ++ +S
Sbjct: 60 KISGVDVGSITGVSLDKATY-VARIDMCISKDIKLPIDSSALITSSGVVGSKFVNISPGS 118
Query: 119 KEKKTIFQIATE 130
K + E
Sbjct: 119 DIKLILHGGKIE 130
>gi|289645128|ref|ZP_06477152.1| virulence factor Mce family protein [Frankia symbiont of Datisca
glomerata]
gi|289505068|gb|EFD26143.1| virulence factor Mce family protein [Frankia symbiont of Datisca
glomerata]
Length = 306
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 31/315 (9%), Positives = 90/315 (28%), Gaps = 10/315 (3%)
Query: 1 MESKNYYTSVGLFVVSIL-FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ + +F + L + + V R G+ ++V
Sbjct: 1 MISRMVRVQLVVFTLLSLTAGLLIFFRYARVPAELGIGTYTVTARFTEGA-GIYPHANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ G + + L + + + + T A I + G Y++L
Sbjct: 60 YRGVQSGTVTAVRLASDG---VDVEMRLDRGRKIPVDTDAEIHSVSAIGEQYVDLIPRTT 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
T+ + +R +G+ + S + +++ E+
Sbjct: 117 SGPTLTDSSRIPAERTRTPKQIAGVLDDLHAL-----LTSVPQDSLATVLDEAEQAFEGI 171
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+++ + N + D T ++ T A +++
Sbjct: 172 GPDLQRLLVGTQNLVGQADANYEATARLLTDAEPVLDSQLTTSPAIRGWTSDLAAFTEQL 231
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ +++ + ++ Q + D+ T + L + + + ++
Sbjct: 232 RRSDSDLRGVFASVPGAAGQAEGLLKDLSPTMPVLLGSSDVLADLAAAYRTPIEQVLVVY 291
Query: 300 FLENIADSTSNMRSS 314
+ + +
Sbjct: 292 PMWFTGATAAAAPQR 306
>gi|110637171|ref|YP_677378.1| ABC transporter permease [Cytophaga hutchinsonii ATCC 33406]
gi|110279852|gb|ABG58038.1| ABC transporter-related permease with MCE domain [Cytophaga
hutchinsonii ATCC 33406]
Length = 308
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/298 (14%), Positives = 91/298 (30%), Gaps = 6/298 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VGL + + +L ++ + I VDGL+ + V NG
Sbjct: 4 SKEFKVGLMTLIAGVILYLGFNFLKGTDVFSNTNTYYIKY--SKVDGLAPSNPVLINGYQ 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ L L+QE N L +R D + +T A I ++ L G I L K+ +
Sbjct: 62 VGKVKELVLNQEDNNSILVSIDVRKDILVGDATYAEI-SKDLLGSMSIVLKMGSNTKQAV 120
Query: 125 FQIATERNQRAMITATP-SGINYFISNAENTSKKI--SDSSRHIQKIIENIEKPLTTTIA 181
+ + +T S I + + T + +K+ + +
Sbjct: 121 NGDTIKGGFQLSLTDMLGSKAYPVIDHLDTTLVHLSKMLDDDMRKKLYGTLANLEAISGI 180
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T+ + ++ + T + + ++
Sbjct: 181 LRSTMQSGKSSLDGTFQNLNTLTAHMIETERQLTPILNKFGALADSLNDLELKATVANAN 240
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
L S + + + + + + + + +D LL ++
Sbjct: 241 KLLVELNKSATKISNGEGTLGALVNDKSAYANLNKTLTDLDTLLVHLNNNPHHFFAPF 298
>gi|229494123|ref|ZP_04387886.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318485|gb|EEN84343.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 336
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/118 (19%), Positives = 40/118 (33%), Gaps = 6/118 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K GLF + + + L N G ++ + GL T S V+
Sbjct: 1 MSVKKSLIRFGLFAALSILATVVVVSTL--INPVSGSSSQYRAVFV-NASGLVTGSDVQI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + L ++ + + A +R L G I + +
Sbjct: 58 AGVRVGRVDSVELVNN---QAVVGFELESAQRIPSDGRAVVRYADLLGARTISIEPGQ 112
>gi|269128026|ref|YP_003301396.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268312984|gb|ACY99358.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 364
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 77/290 (26%), Gaps = 4/290 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V + L + G E+ V GL T V+ G+PVGR+ + +
Sbjct: 26 VFAALTTALTVFIAQQILATGWGDRYELTATF-DDVTGLLTGDQVKLAGVPVGRVNKIEI 84
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + +TA ++ + + G + L E+ Q
Sbjct: 85 ---RRGRAEVVMEVDRKVRIPDDSTAAVQWRNVMGQRVVYLRPGTSERMLADGGRIPHTQ 141
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
+ ++ + + Q + N + T ++
Sbjct: 142 SVVDLGEIVNSLGPLTGSLDPDMLNKLLQGFAQALDGNEQNINTMIQNMEVLLAAFGRRA 201
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF 253
+ + V D + L ++ A ++E +++++
Sbjct: 202 QTIQRMVEDYQTVAEAVQARDRQIAAAVDNLEKLTEVFAANRRLLDGALVEVSRLTADLD 261
Query: 254 VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
D V Q KID+L + N
Sbjct: 262 QVLGDNEQQLSRIVENLASFTQTARWKIDNLERMVQQLPLALRQLFASVN 311
Score = 41.5 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 16/216 (7%), Positives = 55/216 (25%), Gaps = 2/216 (0%)
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ ++ + + + + + V + +
Sbjct: 86 RGRAEVVMEVDRKVRIPDDSTAAVQWRNVMGQRVVYLRPGTSERMLADGGRIPHTQSVVD 145
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ +++ S + + + + + I + + +++
Sbjct: 146 LGEIVNSLGPLTGSLDPDMLNKLLQGFAQALDGNEQNINTMIQNMEVLLAAFGRRAQTIQ 205
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + Q AE + + A +N + R + + + +L
Sbjct: 206 RMVEDYQTVAEAVQARDRQIAAAVDN--LEKLTEVFAANRRLLDGALVEVSRLTADLDQV 263
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +V L ++N ER Q +
Sbjct: 264 LGDNEQQLSRIVENLASFTQTARWKIDNLERMVQQL 299
>gi|326800465|ref|YP_004318284.1| hypothetical protein Sph21_3069 [Sphingobacterium sp. 21]
gi|326551229|gb|ADZ79614.1| Mammalian cell entry related domain protein [Sphingobacterium sp.
21]
Length = 334
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/340 (10%), Positives = 110/340 (32%), Gaps = 16/340 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VGLF + + F +I+ L + + + + + GL ++V F+G+ +G
Sbjct: 11 VIVGLFTLLGIIFFVTAIFVLGGNQKRFTKTIGLRTILT-NAGGLKAGNNVYFSGVKIGT 69
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I + L + + + + ++G G I + + +
Sbjct: 70 IKNIKLIENSHVEIDFNIEQKSQDYIRKDAEVRVSSEGFIGNKIIVIQGGSPNVAVVEEG 129
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + E + +++++ I +++K TI
Sbjct: 130 DL-------------LQSVKSIDTEEMMATLQVNNQNLVAITSDVKKLSEKIANGEGTIG 176
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+L ++ + +T ++++ + + T L+ + + + Q
Sbjct: 177 AILTDSTMALQVRAIMASLTQTAANTAKVSSALNAFTTKLNTEGSLANEILTDTSV--YQ 234
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
++ + + T+ +++ K + L + + + + + N+ +S
Sbjct: 235 SLRSSAAQLQGVTQSAAALTANLTKASEKMNSKDNTLGALLNDQEMAVTMKQTMCNLEES 294
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
T + ++ A++ R E + +
Sbjct: 295 TDKLNQNMEALQHNFLFRGFFKKQAKEREKEAKAALEKTN 334
>gi|29832437|ref|NP_827071.1| mce-related protein [Streptomyces avermitilis MA-4680]
gi|29609556|dbj|BAC73606.1| putative mce(mammalian cell entry)-related protein [Streptomyces
avermitilis MA-4680]
Length = 425
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/135 (17%), Positives = 44/135 (32%), Gaps = 5/135 (3%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + F V+ + S+ + + G V S G+ + V
Sbjct: 1 MITRTVKAQLLAFATVTAVGVSYVGAEYTGLVDDVLGRGYTVRADFADS-GGIFPGAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ G+PVGR+ L L I+ P + T A + + G Y++L
Sbjct: 60 YRGVPVGRVGALRLTGSDG--VSVALDIKDGVPRIPADTLAVVANRSAVGEQYVDLQPRT 117
Query: 119 KEKKTIFQIATERNQ 133
+ +
Sbjct: 118 SHGPYLLDGSAIPRG 132
>gi|291279858|ref|YP_003496693.1| hypothetical protein DEFDS_1477 [Deferribacter desulfuricans SSM1]
gi|290754560|dbj|BAI80937.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 326
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 1/114 (0%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
KN VGLF+ L + F + +L+ V + I S DGL V ++G
Sbjct: 7 KNLELKVGLFIFISLLIAVFIVVFLAVQKNIFTKKVRVKV-IAASGDGLVKGMPVLYSGF 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ ++ L+L + K I+ + + + ++ G + + S+
Sbjct: 66 QIAKVDDLYLRDDGKVEVKIKIPIKYAKWIKRDSIVKLSSKNFIGSSVLVFSSG 119
>gi|221110039|ref|XP_002170884.1| PREDICTED: hypothetical protein, partial [Hydra magnipapillata]
Length = 863
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 3/130 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
V + V+ + ++ +L N +D + +V GL + V NG+
Sbjct: 209 TREIKVAVLVILSIVLFYWGFVFLKGRNLFDNSNKLYAVY--ENVAGLVVAAPVTINGLN 266
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G++ + + + + S+ A I+ GL G I + +K +
Sbjct: 267 IGKVNAIEMLPDGKMKVELVIT-NEQIQIAKSSVAQIKDSGLIGGREIAIINNFSDKNYV 325
Query: 125 FQIATERNQR 134
T +
Sbjct: 326 ESGDTLKTSD 335
>gi|326383096|ref|ZP_08204785.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198232|gb|EGD55417.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 351
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 43/114 (37%), Gaps = 5/114 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +G F ++++ + SR + S + + S V+ G+
Sbjct: 9 RATVIKLGAFALAMILVLVGLVLVFSRYQGGSSDKYS---ALFTSASAMKSGSVVKIAGV 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
VG + + L+Q+ + + D L S A IR Q L G Y+EL
Sbjct: 66 DVGAVSSVELNQDN--IAKVTFTVNDDYRLPKSVQALIRYQNLTGDRYLELQPG 117
>gi|183983840|ref|YP_001852131.1| Mce family protein, Mce5B [Mycobacterium marinum M]
gi|183177166|gb|ACC42276.1| Mce family protein, Mce5B [Mycobacterium marinum M]
Length = 351
Score = 80.7 bits (196), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +GL + ++ + + ++S + G V GL VR
Sbjct: 1 MKFRGP--LIGLSLFMVVAVALTWMVYVSLRREVAGKTVAYAAVFTD-VYGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + L+ + + +++ + L+ +T A++ Q + G Y+ LS
Sbjct: 58 AGVRVGRVEKIDLEG---KLAKVRFVVQNEQRLFGNTVASVTYQNIVGQRYLGLSLG 111
>gi|258541329|ref|YP_003186762.1| toluene ABC transporter periplasmic protein [Acetobacter
pasteurianus IFO 3283-01]
gi|256632407|dbj|BAH98382.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-01]
gi|256635464|dbj|BAI01433.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-03]
gi|256638519|dbj|BAI04481.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-07]
gi|256641573|dbj|BAI07528.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-22]
gi|256644628|dbj|BAI10576.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-26]
gi|256647683|dbj|BAI13624.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-32]
gi|256650736|dbj|BAI16670.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256653727|dbj|BAI19654.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-12]
Length = 181
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/121 (24%), Positives = 47/121 (38%), Gaps = 7/121 (5%)
Query: 1 MESKN----YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M K+ G FV+ + + + + D ++ +DGL S
Sbjct: 8 MAEKSRRSLTELLTGTFVLVAIGGMLVAAV-VGEGRKTDTTGYQLNADFTH-IDGLDIGS 65
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
VR G+ VG++V +D + + +RPD L T A I + L G YI LS
Sbjct: 66 DVRLAGVTVGQVVRETVDP-HTFKAHVTFTVRPDIHLSDDTAAIITSDSLLGGKYIALSP 124
Query: 117 L 117
Sbjct: 125 G 125
>gi|330993002|ref|ZP_08316941.1| putative phospholipid ABC transporter-binding protein mlaD
[Gluconacetobacter sp. SXCC-1]
gi|329759934|gb|EGG76439.1| putative phospholipid ABC transporter-binding protein mlaD
[Gluconacetobacter sp. SXCC-1]
Length = 190
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/127 (25%), Positives = 45/127 (35%), Gaps = 4/127 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
G V++ L + + +DGLS S VR GI VG
Sbjct: 27 ELLAGFAVLAALAGMLAYAVL--DKGRTHETGYRLNAGFAH-IDGLSIGSDVRLAGITVG 83
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++V +D + + +RPD L T A I + L G YI LS EK
Sbjct: 84 QVVAERVDPKTYA-AQVTFTVRPDIRLPDDTAAIITSDSLLGGKYIALSPGGDEKMLAPG 142
Query: 127 IATERNQ 133
+ Q
Sbjct: 143 GTIGQTQ 149
>gi|329901830|ref|ZP_08272921.1| Paraquat-inducible protein B [Oxalobacteraceae bacterium IMCC9480]
gi|327548997|gb|EGF33610.1| Paraquat-inducible protein B [Oxalobacteraceae bacterium IMCC9480]
Length = 539
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 29/399 (7%), Positives = 97/399 (24%), Gaps = 32/399 (8%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + L + V F I G+I LD L D + S+
Sbjct: 168 VLHAEQIGSLDIGAPVFFRHIQAGQIAAYELDPNGTGVILHVFVNAPYDKYVTTSSRFWQ 227
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + + +I A P +
Sbjct: 228 ASGVELSLDASGIKVATESLASILSGGISFGALDDAVAAPEAAINSVFTL---------Y 278
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ + E+ + ++ + +
Sbjct: 279 GNRDNAMKHADTVVRKALLYFDESTRGLAPGAPVDFRGIVIGEVTAISLEVDRKSKVFRF 338
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + ++ + + V + ++
Sbjct: 339 PVEVNIYPQRLQSHYRNGTPAADDSREVIDALVARGMRAQLKTGNLLT------------ 386
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
L + + + + + + ++ ++ I + + + + +E I ++
Sbjct: 387 GQLFVALDFFPDAAKAQIDWKKEPITLATVPGTLEELQAILSRIARRLDKVP-LEQIGAD 445
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ + + + + + L A + R T + + S
Sbjct: 446 VRVALKSLDSTLKSTDALVRRVNT-ELAPQASATLEQVRKTVASADAVLASDAP------ 498
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ + + + +R+P+ ++ G+
Sbjct: 499 --LQQDLRTTLSDISRAAQALRSLTDYLDRHPEALLRGK 535
>gi|291449031|ref|ZP_06588421.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291351978|gb|EFE78882.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 361
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 3/105 (2%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
V ++ ++ LS +N G R GL SVR G+ VG++ +
Sbjct: 32 LVFIVVTVLATTVLGLSIANTGVGDTTTYKARFTD-ATGLIPGDSVRIAGVKVGQVESVR 90
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + +R L S TA+I+ + G Y++L
Sbjct: 91 VA--DRRVAEVAFAVRKGRDLPASVTASIKYLNMVGQRYVDLDQG 133
>gi|308406178|ref|ZP_07495391.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu012]
gi|308364262|gb|EFP53113.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu012]
Length = 463
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 30 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 88
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 89 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 137
>gi|306805326|ref|ZP_07441994.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu008]
gi|308348114|gb|EFP36965.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu008]
Length = 438
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|215405535|ref|ZP_03417716.1| MCE-family protein mce4F [Mycobacterium tuberculosis 02_1987]
gi|289747330|ref|ZP_06506708.1| MCE-family protein mce4F [Mycobacterium tuberculosis 02_1987]
gi|289687858|gb|EFD55346.1| MCE-family protein mce4F [Mycobacterium tuberculosis 02_1987]
Length = 498
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|218550476|ref|YP_002384267.1| toluene ABC transporter membrane protein [Escherichia fergusonii
ATCC 35469]
gi|218358017|emb|CAQ90663.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia fergusonii ATCC 35469]
Length = 188
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L + F + + ++ GL S VR
Sbjct: 6 MQTKKNEIWVGFFLLVALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKVRSPVRI 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 66 GGVVVGRVSDITLDPQTY-LPRVTLDIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 124
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + +
Sbjct: 125 DPELGTSILKDGGTIQDTKSAMVLED 150
>gi|241662135|ref|YP_002980495.1| Mammalian cell entry related domain-containing protein [Ralstonia
pickettii 12D]
gi|240864162|gb|ACS61823.1| Mammalian cell entry related domain protein [Ralstonia pickettii
12D]
Length = 547
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/397 (9%), Positives = 106/397 (26%), Gaps = 23/397 (5%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L + V F + VG++ +D + I + P R +
Sbjct: 173 DLGSLDIGAPVYFRRVRVGQVTAYDIDADGKG---VTLHIFVNAPFDKFVARGTRFWNAS 229
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
GI + K + A T + S+A+
Sbjct: 230 GIDLKLDANGLKVDTQ-SLLTVALGGIAFQTPEEADHEPAASDAQFQL-----VRNETAA 283
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + T + ++ + + + SK + + +L
Sbjct: 284 LKDPEHLSQTVVMYFHRSLRGLNVGAPVEFKGINVGEIKSIGIHYSKKRHEFVLPVTATL 343
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+D++ N V + V + + + T ID +
Sbjct: 344 YPTRFGMDIRDDNPQHAAEDVRTQFDVLVKNGMRAQLKSASLLTGQQFVNLDFIDTAERE 403
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + + I I + K+ E I +++ +
Sbjct: 404 KTPPRFGMRDRDGAYVFPTADNPTDDIEAQIAGIAKKLNKV-----PFEQIGQDVHRTLT 458
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + ++ + L + + R T + + +
Sbjct: 459 TLDATLKQTEQLAKTVN-SDLAPQMKETLAEARRTLDSARQVFSDDAP--------LQRN 509
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ + ++ + + +R+P+ ++ G+ K +
Sbjct: 510 ARDTLEQVAKAAASVRVLTDYLDRHPEALIRGKAKDA 546
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 76/258 (29%), Gaps = 10/258 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V++ S+ GL+ + V F GI VG I + + H P+ +
Sbjct: 291 SQTVVMYFHRSLRGLNVGAPVEFKGINVGEIKSIGIHYSKKRHEFV-------LPVTATL 343
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T+ I ++ +T F + + RA + + N +
Sbjct: 344 YP---TRFGMDIRDDNPQHAAEDVRTQFDVLVKNGMRAQLKSASLLTGQQFVNLDFIDTA 400
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + + + + T N I+ + Q+ + T
Sbjct: 401 EREKTPPRFGMRDRDGAYVFPTADNPTDDIEAQIAGIAKKLNKVPFEQIGQDVHRTLTTL 460
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ L K + + ++ + L + + ++ + + R+T + +
Sbjct: 461 DATLKQTEQLAKTVNSDLAPQMKETLAEARRTLDSARQVFSDDAPLQRNARDTLEQVAKA 520
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ L ++
Sbjct: 521 AASVRVLTDYLDRHPEAL 538
Score = 39.9 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 26/89 (29%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + ++R G V S +G+ + V++ + +G + + L
Sbjct: 28 LVPIVALTVGATLMARVILARGAQVTVT---FSSAEGIEAGKTRVKYKSVDIGVVKAVGL 84
Query: 74 DQEYPN-HSLAKALIRPDTPLYPSTTATI 101
+ L + T +
Sbjct: 85 TDDRSGAVVLIELTHDGKAFAASDTRFWV 113
>gi|309780676|ref|ZP_07675418.1| PqiB family protein [Ralstonia sp. 5_7_47FAA]
gi|308920599|gb|EFP66254.1| PqiB family protein [Ralstonia sp. 5_7_47FAA]
Length = 547
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/397 (10%), Positives = 106/397 (26%), Gaps = 23/397 (5%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L + V F + VG++ +D + I + P R +
Sbjct: 173 DLGSLDIGAPVYFRRVRVGQVTAYDIDADGKG---VTLHIFVNAPFDKFVARGTRFWNAS 229
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
GI + K + A T + S+AE
Sbjct: 230 GIDLKLDANGLKVDTQ-SLLTVALGGIAFQTPEEADHETAASDAEFQL-----VRNETMA 283
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + T + ++ + + + SK + + +L
Sbjct: 284 LKDPEHLSQTVVMYFHRSLRGLNVGAPVEFKGINVGEIKSIGIHYSKKRHEFVLPVTATL 343
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+D++ N V + V + + + T ID +
Sbjct: 344 YPTRFGMDIRDDNPQHAAEDVRTQFDVLVKNGMRAQLKSASLLTGQQFVNLDFIDTAERE 403
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + + I I + K+ E I +++ +
Sbjct: 404 KTPPRFGMRDRDGAYVFPTADNPTDDIEAQIAGIAKKLNKV-----PFEQIGQDVHRTLT 458
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + ++ + L + + R T + + +
Sbjct: 459 TLDATLKQTEQLAKTVN-SDLAPQMKETLAEARRTLDSARQVFSDDAP--------LQRN 509
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ + ++ + + +R+P+ ++ G+ K +
Sbjct: 510 ARDTLEQVAKAAASVRVLTDYLDRHPEALIRGKAKDA 546
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 76/258 (29%), Gaps = 10/258 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V++ S+ GL+ + V F GI VG I + + H P+ +
Sbjct: 291 SQTVVMYFHRSLRGLNVGAPVEFKGINVGEIKSIGIHYSKKRHEFV-------LPVTATL 343
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T+ I ++ +T F + + RA + + N +
Sbjct: 344 YP---TRFGMDIRDDNPQHAAEDVRTQFDVLVKNGMRAQLKSASLLTGQQFVNLDFIDTA 400
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + + + + T N I+ + Q+ + T
Sbjct: 401 EREKTPPRFGMRDRDGAYVFPTADNPTDDIEAQIAGIAKKLNKVPFEQIGQDVHRTLTTL 460
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ L K + + ++ + L + + ++ + + R+T + +
Sbjct: 461 DATLKQTEQLAKTVNSDLAPQMKETLAEARRTLDSARQVFSDDAPLQRNARDTLEQVAKA 520
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ L ++
Sbjct: 521 AASVRVLTDYLDRHPEAL 538
Score = 39.9 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 26/89 (29%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + ++R G V S +G+ + V++ + +G + + L
Sbjct: 28 LVPIVALTVGATLMARVILARGAQVTVT---FSSAEGIEAGKTRVKYKSVDIGVVKAVGL 84
Query: 74 DQEYPN-HSLAKALIRPDTPLYPSTTATI 101
+ L + T +
Sbjct: 85 TDDRSGAVVLIELTHDGKAFAASDTRFWV 113
>gi|306809512|ref|ZP_07446180.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu007]
gi|308344184|gb|EFP33035.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu007]
Length = 441
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|113955051|ref|YP_729483.1| ABC transporter [Synechococcus sp. CC9311]
gi|113882402|gb|ABI47360.1| possible ABC transporter [Synechococcus sp. CC9311]
Length = 297
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 35/110 (31%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG V++ + ++ WL V GL+ S V +
Sbjct: 1 MRRSVREGLVGFSVIAAVVCFAGTMLWLRGERVL-SKTWSVTADF-QDAGGLAVRSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIR-PDTPLYPSTTATIRTQGLAGI 109
GI VG + + + P I D L AT+ + L G
Sbjct: 59 RGIMVGNVTDIKV---TPKAVRVSIEINQDDLQLTLPVQATVSSASLLGG 105
>gi|260549861|ref|ZP_05824077.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624]
gi|260407111|gb|EEX00588.1| toluene tolerance efflux transporter [Acinetobacter sp. RUH2624]
Length = 227
Score = 80.7 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRS-NQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+S+ +VG+FV+ FF +S + + +V+GL + V
Sbjct: 1 MKSRTSELAVGIFVIIFGIALFFLAMKVSGLVGTNLSEGYTMKAQF-DNVNGLKPRAKVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 60 MSGVTIGRVDSITLDPVT-RLATVTFDLDGKL 90
>gi|300692380|ref|YP_003753375.1| paraquat-inducible protein B [Ralstonia solanacearum PSI07]
gi|299079440|emb|CBJ52115.1| paraquat-inducible protein B [Ralstonia solanacearum PSI07]
Length = 547
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/398 (7%), Positives = 102/398 (25%), Gaps = 23/398 (5%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L + V F + VG++ +D + I +TP T + R
Sbjct: 172 TDLGSLDIGAPVYFRRVRVGQVTAYDIDADGKG---VTLHIFVNTPFDKFVTRSSRFWNA 228
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+GI ++ K + + + + + + +
Sbjct: 229 SGIDLKLDASGLKVDMQSLLTVALGGIAFQSPEDADREPAPQNTEFDLVRNEAMALKDPE 288
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + ++ + + V I+ + + + + +
Sbjct: 289 HVSQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSISIHYSKERHEFVLPVTAVLYPTRF 348
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ V N +++ + + + + F E +
Sbjct: 349 GIAIRDDTAAHAVEDTRAQFDTLVRNGMRAQLKSASLLTGQQFVQLDFVEAADRGKTPPR 408
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ +N D + I +++ +
Sbjct: 409 FGLRERDGAYVFPTADNPTDDIEA-----------QIAGIVKKLNKVPFDQIGQDVHRAL 457
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + ++ + L + + R T E +
Sbjct: 458 NSLDATLKQTEQLAKTVN-SDLAPQMKETLAEARRTMETARQTFSEDAP--------LQR 508
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ ++ + ++ + + +R+P+ ++ G+ K +
Sbjct: 509 NARDTLEQMAKAAASVRVLTDYLDRHPEALIRGKAKDA 546
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 72/258 (27%), Gaps = 10/258 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V++ S+ GL+ + V F GI VG I + + H P+ T
Sbjct: 291 SQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSISIHYSKERHEFV-------LPV---T 340
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T+ I + ++ + F RA + + +
Sbjct: 341 AVLYPTRFGIAIRDDTAAHAVEDTRAQFDTLVRNGMRAQLKSASLLTGQQFVQLDFVEAA 400
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + E + T N I + Q+ + N+
Sbjct: 401 DRGKTPPRFGLRERDGAYVFPTADNPTDDIEAQIAGIVKKLNKVPFDQIGQDVHRALNSL 460
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ L K + + ++ + L + + ++ + + R+T + +
Sbjct: 461 DATLKQTEQLAKTVNSDLAPQMKETLAEARRTMETARQTFSEDAPLQRNARDTLEQMAKA 520
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ L ++
Sbjct: 521 AASVRVLTDYLDRHPEAL 538
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 25/77 (32%), Gaps = 5/77 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + ++R G V S +G+ + V++ + +G + + L
Sbjct: 28 LVPIVALVVGVTLMTRVILARGAQITVT---FSSAEGIEAGKTRVKYKSVDIGVVKSVGL 84
Query: 74 DQEYPNHSLAKALIRPD 90
+ + D
Sbjct: 85 TDDRSGAV-VLIELTRD 100
>gi|169794573|ref|YP_001712366.1| toluene tolerance efflux ABC transporter periplasmic
substrate-binding protein [Acinetobacter baumannii AYE]
gi|184159619|ref|YP_001847958.1| ABC transporter [Acinetobacter baumannii ACICU]
gi|213158856|ref|YP_002320854.1| toluene tolerance efflux transporter [Acinetobacter baumannii
AB0057]
gi|215482162|ref|YP_002324344.1| mce related family protein [Acinetobacter baumannii AB307-0294]
gi|239503255|ref|ZP_04662565.1| mce related family protein [Acinetobacter baumannii AB900]
gi|260557006|ref|ZP_05829223.1| toluene tolerance efflux transporter [Acinetobacter baumannii
ATCC 19606]
gi|294839768|ref|ZP_06784451.1| mce related family protein [Acinetobacter sp. 6013113]
gi|294842632|ref|ZP_06787315.1| mce related family protein [Acinetobacter sp. 6014059]
gi|294860446|ref|ZP_06798215.1| mce related family protein [Acinetobacter sp. 6013150]
gi|301347320|ref|ZP_07228061.1| mce related family protein [Acinetobacter baumannii AB056]
gi|301510050|ref|ZP_07235287.1| mce related family protein [Acinetobacter baumannii AB058]
gi|301597236|ref|ZP_07242244.1| mce related family protein [Acinetobacter baumannii AB059]
gi|169147500|emb|CAM85361.1| toluene tolerance efflux transporter (ABC superfamily, peri-bind)
[Acinetobacter baumannii AYE]
gi|183211213|gb|ACC58611.1| ABC-type transport system [Acinetobacter baumannii ACICU]
gi|193078492|gb|ABO13498.2| toluene tolerance efflux transporter [Acinetobacter baumannii
ATCC 17978]
gi|213058016|gb|ACJ42918.1| toluene tolerance efflux transporter [Acinetobacter baumannii
AB0057]
gi|213988118|gb|ACJ58417.1| mce related family protein [Acinetobacter baumannii AB307-0294]
gi|260409612|gb|EEX02913.1| toluene tolerance efflux transporter [Acinetobacter baumannii
ATCC 19606]
gi|322509529|gb|ADX04983.1| ttg2C [Acinetobacter baumannii 1656-2]
gi|323519549|gb|ADX93930.1| ABC-type transport system [Acinetobacter baumannii TCDC-AB0715]
Length = 226
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRS-NQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+S+ +VG+FV+ FF +S + + +V+GL + V
Sbjct: 1 MKSRTSELAVGIFVIIFGIALFFLAMKVSGLVGTNLSDGYTMKAQF-DNVNGLKPRAKVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 60 MSGVTIGRVDSITLDPVT-RLATVTFDLDGKL 90
>gi|120405350|ref|YP_955179.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958168|gb|ABM15173.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 430
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 76/295 (25%), Gaps = 10/295 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G V + + + + G GL + V+ G V
Sbjct: 8 NLAVIGAIGVGVTAGVVLAALQYDKLPVFSG-GERYSAYFTE-ASGLQPGADVQVAGHKV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + LD L I + + + A I+T L G+ +E+
Sbjct: 66 GKVSDINLDG---GRVLVNFEIGENIAIGDRSEAAIKTNSLLGLKVLEV---TPRGADSL 119
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
++ P + S N + + + + + +E
Sbjct: 120 AQPIPIDRTTPAYQLPDALGDLSSTISNLN--TTSLNDSLATLAAEFADTPDDLKNAVEG 177
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ A S ++ +S + + A + + +
Sbjct: 178 VMRFSATLNSRDQQLRDLLANARSASTVLADRTDQVVTLIEHSAALLAQLRVEREALDDI 237
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
S+ + S + +R + V ID+ +K
Sbjct: 238 SGNISDLTEQLSALIDEHRTSLRPALEKLSGVMALIDNRRDKVQESLKLLHPFML 292
>gi|324115203|gb|EGC09167.1| hypothetical protein ERIG_00079 [Escherichia fergusonii B253]
gi|325498774|gb|EGC96633.1| toluene transporter subunit: membrane component of ABC superfamily
[Escherichia fergusonii ECD227]
Length = 183
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKNEIWVGFFLLVALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKVRSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVSDITLDPQTY-LPRVTLDIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + +
Sbjct: 120 DPELGTSILKDGGTIQDTKSAMVLED 145
>gi|90413933|ref|ZP_01221918.1| putative paraquat-inducible protein B [Photobacterium profundum
3TCK]
gi|90324995|gb|EAS41510.1| putative paraquat-inducible protein B [Photobacterium profundum
3TCK]
Length = 548
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/397 (7%), Positives = 98/397 (24%), Gaps = 30/397 (7%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V + G VGR+ + D + ++ + IR++
Sbjct: 168 AGKLSVGDPVLYEGFTVGRVEKVSFDTDTKKA-------NYQLFIFQPYDSLIRSRTKFW 220
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+T + + + + E ++ + + K+
Sbjct: 221 LTSGVDLQMSAQGFNLKIGSIESLITGGVSFRVPNGSEEGNLITKQMSLF--------KL 272
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
N + ++ +++ K +
Sbjct: 273 YNNFNVVRERIFDEYIEYVMLFDESVRGLNEGAPIEYRGIRIGTVKKVPLRLPTGEEGFS 332
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI---DHLL 285
+ ++ + + + +R + +T + + +
Sbjct: 333 TKQIPVLIRIELGRVYGKNGFDSLDGLKRNLEREFKGGLRGSLKTGNLLTGALFVDTEVY 392
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + L + + T+ ++ +
Sbjct: 393 KDEKMPPINSYDDYPLFPTKAGGFAEIQKQISGVLKKFNDLPVEDTLTSLTKTLDTSQKT 452
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ ++ + A K+ +L D ++++ + T
Sbjct: 453 LLAAEKVAKSLDKLLAQKDTQALPNDMRKSLQEIQATLNGFGPDAAP------------Y 500
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+++ + + ++ + L P +V+G +K
Sbjct: 501 RNLEGALARFEQVMKELQPVLRQLNEKPNSLVFGDDK 537
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 10/70 (14%), Positives = 22/70 (31%), Gaps = 6/70 (8%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------DQEYPNHSLAKAL 86
+ E ++ SV GL+ + + + GI +G + + L +
Sbjct: 282 RIFDEYIEYVMLFDESVRGLNEGAPIEYRGIRIGTVKKVPLRLPTGEEGFSTKQIPVLIR 341
Query: 87 IRPDTPLYPS 96
I +
Sbjct: 342 IELGRVYGKN 351
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + I+ L + GP + ++ + +G+ + ++ + VG + + L
Sbjct: 22 LVPIVALVIGIWMLVQFVGSKGPEITLTLK---TAEGIEVGKTEIKSLNVKVGVVTEVKL 78
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + + + L T +
Sbjct: 79 SDDYTYITAKVQMDKDAERMLKEDTRFWV 107
>gi|56479163|ref|YP_160752.1| periplasmic component of ABC-type transport system involved in
resistance to organic solvents [Aromatoleum aromaticum
EbN1]
gi|56315206|emb|CAI09851.1| periplasmic component of probable ABC-type transport system
involved in resistance to organic solvents [Aromatoleum
aromaticum EbN1]
Length = 311
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 43/273 (15%), Positives = 100/273 (36%), Gaps = 10/273 (3%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
+W S Q P + ++ GSV GL+ + VR+ G+ G++ + LD + P+ L
Sbjct: 26 WWFSDERQ---PTRDYVLESRGSVTGLNVEGQVRYRGMSAGKVTDIRLDPQDPSKILVDI 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
IR D P+ ST A + QG+ GI Y++L + + + P +
Sbjct: 83 RIREDLPITRSTRARLGYQGVTGIAYVQLDDSEENPVPL------TGDPPRLVLEPGLME 136
Query: 146 Y-FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
S + + + + Q + ++ L T+ ++++ + + + +
Sbjct: 137 QLTDSTLDAMKRVTMIADQLAQFLSDDNLGRLRNTLQHLDSAAAGIDRTFADAPATLEAI 196
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ + + K T+ +L + + A+ + + + ++
Sbjct: 197 RSALNQDNLKKFATTLANLEQASGDAVPAVAEMRALMSRLQTTAENLDAAMAATGEGLID 256
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + +E+ L S S +
Sbjct: 257 NTLPQLNVLLKELTGTSRRLGSLIEEVQASPQM 289
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 63/171 (36%), Gaps = 7/171 (4%)
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+++ + + +N+ + ++ SA I +T+
Sbjct: 135 MEQLTDSTLDAMKRVTMIADQLAQFLSDDNLGRLRNTLQHLDSAAAGIDRTFADAPATLE 194
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
I + + N +KFA ++ + A + + + M + T+E ++ + +
Sbjct: 195 AIRSALNQDN--LKKFATTLANLEQ--ASGDAVPAVAEMRALMSRLQTTAENLDAAMAAT 250
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
G L + + L + L+++L T + + +PQ ++ GR +
Sbjct: 251 GEGLID---NTLPQLNVLLKELTGTSRRLGSLIEEVQASPQMLLSGRSQRP 298
>gi|254819943|ref|ZP_05224944.1| virulence factor mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 491
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 6/139 (4%)
Query: 3 SKNYYTSVGLFVVSIL-FFSFFSIYWLSRSNQYDG-PMAEVIIRIPGSVDGLSTDSSVRF 60
++ + +F V L S ++ + G V + +P GL +V +
Sbjct: 5 TRRTKIQLAIFTVISLSAASLMFFDYMQIPTVFFGVDRYTVTVELPQ-AGGLYPGGNVTY 63
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L + A + D + + A + + G Y+EL +
Sbjct: 64 RGVEVGRVQAVKLTATG---AEAVLQLNSDVHIPANLNAQVHSVSAVGEQYVELLPRGGQ 120
Query: 121 KKTIFQIATERNQRAMITA 139
++ R+ +
Sbjct: 121 GPSLKNGDVIPVDRSYVPP 139
>gi|269104699|ref|ZP_06157395.1| paraquat-inducible protein B [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161339|gb|EEZ39836.1| paraquat-inducible protein B [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 498
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 31/403 (7%), Positives = 110/403 (27%), Gaps = 24/403 (5%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ LS V + G VGR+ + + ++ + I
Sbjct: 112 VVLTNKEAGKLSVGDPVLYEGFTVGRVEQVSFNTNTKLA-------NYHLFIFQPYDSLI 164
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+T + + + + E ++IT S ++ ++
Sbjct: 165 QTTTKFWLASGVDFQMSASGINVKIGSLE----SLITGGVSFGLPDGVSSGEKVTTQNEK 220
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
R + + E + + + ++
Sbjct: 221 YRLYDNMKQVTEGMYDQYLPYVMLFKESIRGLQPGAPVEYRGVRIGTVEKVPFKLPTNKH 280
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ I+L ++ Q+ + + + ++ + + +
Sbjct: 281 GFSNKMIPILVHIELGRITQLGGHETLEGLKADLQKEFKTGLRATLKTGSLITGALFIDL 340
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
+ + D + + + T+N++ + +
Sbjct: 341 N-VDPDEKAPKLQSFDGYDIFPTKAGGFAEVQKQVTDLLKKLNNLPVEKTVNSLNSTLAA 399
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ Q + + ++ + K+ L D ++++ + T +
Sbjct: 400 TEKTLQSAERVTADLDRLLKQKDTQQLPADIRQSLKEIQHTLNSY------------GPN 447
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ +++ + + Q+ + L + P +++G +K +
Sbjct: 448 GAPYQNLEGALNQFQDVMQELQPVLKQINKKPNSLIFGGDKTA 490
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/258 (7%), Positives = 64/258 (24%), Gaps = 14/258 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH--------SLAKALIR 88
++ S+ GL + V + G+ +G + + H L +
Sbjct: 237 QYLPYVMLFKESIRGLQPGAPVEYRGVRIGTVEKVPFKLPTNKHGFSNKMIPILVHIELG 296
Query: 89 PDTPLY-----PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
T L A ++ + G+ + + + +++A + G
Sbjct: 297 RITQLGGHETLEGLKADLQKEFKTGLRATLKTGSLITGALFIDLNVDPDEKAPKLQSFDG 356
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ F + A ++ + ++K+ + ++ + + + + +
Sbjct: 357 YDIFPTKAGGFAEVQKQVTDLLKKLNNLPVEKTVNSLNSTLAATEKTLQSAERVTADLDR 416
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+ I + + + + + +
Sbjct: 417 LLKQKDTQQLPADIRQSLKEIQHTLNSYGP-NGAPYQNLEGALNQFQDVMQELQPVLKQI 475
Query: 264 VHDVRETTQTFQEVGQKI 281
+ I
Sbjct: 476 NKKPNSLIFGGDKTADPI 493
>gi|118464917|ref|YP_881729.1| virulence factor Mce [Mycobacterium avium 104]
gi|118166204|gb|ABK67101.1| virulence factor mce family protein [Mycobacterium avium 104]
Length = 491
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 49/139 (35%), Gaps = 6/139 (4%)
Query: 3 SKNYYTSVGLFVVSIL-FFSFFSIYWLSRSNQYDG-PMAEVIIRIPGSVDGLSTDSSVRF 60
++ + +F V L S ++ + G V + +P GL +V +
Sbjct: 5 TRRTKIQLAIFTVISLSAASLMFFDYMQIPTVFFGVDRYTVTVELPQ-AGGLYPGGNVTY 63
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L + A + D + + A + + G Y+EL +
Sbjct: 64 RGVEVGRVQAVKLTATG---AEAVLQLNSDVHIPANLNAQVHSVSAVGEQYVELLPRGGQ 120
Query: 121 KKTIFQIATERNQRAMITA 139
++ R+ +
Sbjct: 121 GPSLKNGDVIPVDRSYVPP 139
>gi|187927630|ref|YP_001898117.1| Mammalian cell entry related domain-containing protein [Ralstonia
pickettii 12J]
gi|187724520|gb|ACD25685.1| Mammalian cell entry related domain protein [Ralstonia pickettii
12J]
Length = 547
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 39/397 (9%), Positives = 107/397 (26%), Gaps = 23/397 (5%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L + V F + VG++ +D + I + P R +
Sbjct: 173 DLGSLDIGAPVYFRRVRVGQVTAYDIDTDGKG---VTLHIFVNAPFDKFVARGTRFWNAS 229
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
GI + K + A T + S+A+
Sbjct: 230 GIDLKLDANGLKVDTQ-SLLTVALGGIAFQTPEEADHEPAASDAQFQL-----VRNETAA 283
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + T + ++ + + + SK + + +L
Sbjct: 284 LKDPEHLSQTVVMYFHRSLRGLNVGAPVEFKGINVGEIKSIGIHYSKKRHEFVLPVTATL 343
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+D++ N V + V + + + T ID +
Sbjct: 344 YPTRFGMDIRDDNPQHAAEDVRTQFDVLVKNGMRAQLKSASLLTGQQFVNLDFIDTAERE 403
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
++ + + + I I + K+ E I +++ +
Sbjct: 404 KTAPRFGMRDRDGAYVFPTADNPTDDIEAQIAGIAKKLNKV-----PFEQIGQDVHRTLT 458
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + ++ + L + + R T + + +
Sbjct: 459 TLDATLKQTEQLAKTVN-SDLAPQMKETLAEARRTLDSARQVFSDDAP--------LQRN 509
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ + ++ + + +R+P+ ++ G+ K +
Sbjct: 510 ARDTLEQVAKAAASVRVLTDYLDRHPEALIRGKAKDA 546
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 76/258 (29%), Gaps = 10/258 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V++ S+ GL+ + V F GI VG I + + H P+ +
Sbjct: 291 SQTVVMYFHRSLRGLNVGAPVEFKGINVGEIKSIGIHYSKKRHEFV-------LPVTATL 343
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
T+ I ++ +T F + + RA + + N +
Sbjct: 344 YP---TRFGMDIRDDNPQHAAEDVRTQFDVLVKNGMRAQLKSASLLTGQQFVNLDFIDTA 400
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + + + + T N I+ + Q+ + T
Sbjct: 401 EREKTAPRFGMRDRDGAYVFPTADNPTDDIEAQIAGIAKKLNKVPFEQIGQDVHRTLTTL 460
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ L K + + ++ + L + + ++ + + R+T + +
Sbjct: 461 DATLKQTEQLAKTVNSDLAPQMKETLAEARRTLDSARQVFSDDAPLQRNARDTLEQVAKA 520
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ L ++
Sbjct: 521 AASVRVLTDYLDRHPEAL 538
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 26/89 (29%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + ++R G V S +G+ + V++ + +G + + L
Sbjct: 28 LVPIVALTVGATLMARVILARGAQVTVT---FSSAEGIEAGKTRVKYKSVDIGVVKAVGL 84
Query: 74 DQEYPN-HSLAKALIRPDTPLYPSTTATI 101
+ L + T +
Sbjct: 85 TDDRSGAVVLIELTHDGKAFAASDTRFWV 113
>gi|52841079|ref|YP_094878.1| toluene tolerance protein Ttg2C [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54293818|ref|YP_126233.1| hypothetical protein lpl0874 [Legionella pneumophila str. Lens]
gi|54296864|ref|YP_123233.1| hypothetical protein lpp0905 [Legionella pneumophila str. Paris]
gi|148360511|ref|YP_001251718.1| toluene tolerance protein Ttg2C [Legionella pneumophila str. Corby]
gi|296106422|ref|YP_003618122.1| putative ABC transport system substrate-binding protein [Legionella
pneumophila 2300/99 Alcoy]
gi|52628190|gb|AAU26931.1| toluene tolerance protein Ttg2C [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750649|emb|CAH12056.1| hypothetical protein lpp0905 [Legionella pneumophila str. Paris]
gi|53753650|emb|CAH15108.1| hypothetical protein lpl0874 [Legionella pneumophila str. Lens]
gi|148282284|gb|ABQ56372.1| toluene tolerance protein Ttg2C [Legionella pneumophila str. Corby]
gi|295648323|gb|ADG24170.1| putative ABC transport system substrate-binding protein [Legionella
pneumophila 2300/99 Alcoy]
gi|307609635|emb|CBW99139.1| hypothetical protein LPW_09241 [Legionella pneumophila 130b]
Length = 158
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 43/134 (32%), Gaps = 2/134 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + SVG+F++ L +S + + + GL + V
Sbjct: 3 KQRYVDISVGIFMLLGLLALLVMAMKVSNITDFMSDKTYRVTADFTDIGGLKVRAPVTVA 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY-PSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + + L ++ + D + +A I T+GL G YI + E
Sbjct: 63 GVRIGEVSRIELQP-GELNARVTMTLNGDKKIPYEDASARILTEGLLGSNYISIVPGFDE 121
Query: 121 KKTIFQIATERNQR 134
Sbjct: 122 DGDTDHPYLRDGDT 135
>gi|226304397|ref|YP_002764355.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183512|dbj|BAH31616.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 338
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 106/312 (33%), Gaps = 12/312 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+G+FV+ + + L + + GLS V G+P GR+
Sbjct: 23 LGIFVLVVGLGAA-----LGIPKLWYNVRTSAYTAELANASGLSDTDPVYVAGVPAGRVD 77
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L + H + + D PL +TAT+R + + G Y+E+ + ++
Sbjct: 78 SIDLAGD---HVVVNFRLDKDQPLGNQSTATVRLKTVLGKRYLEIVPAGVVDDSDARVIP 134
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + + + + + ++I + +A I S
Sbjct: 135 LSRTTVPYSLDDVSSDATTAATGVDLQAMESMMNTLSEVIPTDSDQVGRALAGISGASAA 194
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
A N ID+++ ++ + ++ T A+ + Q+++N+ +
Sbjct: 195 FAQNSEQIDQILIMSRELSDMAAAQTDSIVGTAANAQTIVRTLAMRKDALTQLVDNLTII 254
Query: 250 SNNFV----KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ D+ ++ E T T + +ID LL+ S ++S S N
Sbjct: 255 ISKLSTTFVDRQDEFGAMTDNLVEVTTTLKNNADQIDLLLTRLPSALRSVTDSTGTGNWT 314
Query: 306 DSTSNMRSSISA 317
D +
Sbjct: 315 DVNAPAAVIPDN 326
>gi|296114613|ref|ZP_06833266.1| Mammalian cell entry related domain protein [Gluconacetobacter
hansenii ATCC 23769]
gi|295978969|gb|EFG85694.1| Mammalian cell entry related domain protein [Gluconacetobacter
hansenii ATCC 23769]
Length = 219
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 50/133 (37%), Gaps = 5/133 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E K G V+++L + + +DGL+ S VR
Sbjct: 10 ERKPADLLAGFAVLALLGGFLAYAVI--DKGRPAESGYRLNASFAH-IDGLAVGSDVRLA 66
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
GI VG++V +D + + +RPD L T A I + L G YI LS +
Sbjct: 67 GITVGQVVEERVDPKTFA-AGVTFTVRPDIRLPDDTAAIITSDSLLGGKYIALSPG-GDD 124
Query: 122 KTIFQIATERNQR 134
+ + AT +
Sbjct: 125 RMLRPGATIGETQ 137
>gi|239945576|ref|ZP_04697513.1| putative Mce family protein [Streptomyces roseosporus NRRL 15998]
gi|239992043|ref|ZP_04712707.1| putative Mce family protein [Streptomyces roseosporus NRRL 11379]
Length = 343
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 45/118 (38%), Gaps = 4/118 (3%)
Query: 1 MESKNYYTSVG-LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ ++ + V ++ ++ LS +N G R GL SVR
Sbjct: 1 MKRRSLAGPIAKSLVFIVVTVLATTVLGLSIANTGVGDTTTYKARFTD-ATGLIPGDSVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG++ + + + +R L S TA+I+ + G Y++L
Sbjct: 60 IAGVKVGQVESVRVA--DRRVAEVAFAVRKGRDLPASVTASIKYLNMVGQRYVDLDQG 115
>gi|56695908|ref|YP_166259.1| hypothetical protein SPO1007 [Ruegeria pomeroyi DSS-3]
gi|56677645|gb|AAV94311.1| conserved hypothetical protein [Ruegeria pomeroyi DSS-3]
Length = 151
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 48/128 (37%), Gaps = 3/128 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
VG V++ F IY + G + S++G++ + VR G+ +
Sbjct: 7 TEVLVGGAVLA--AALTFGIYASQATGLSRGTGGYELAASFRSLEGVTVGTDVRLAGVKI 64
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + G+ L+ E + + + + + A I ++GL G ++E+
Sbjct: 65 GTVTGVDLNPESYR-ADTRFTVSEGIQIPDDSAAVISSEGLLGGNFLEIMPGGSAFYFEP 123
Query: 126 QIATERNQ 133
+ Q
Sbjct: 124 GDVIDDTQ 131
>gi|307081670|ref|ZP_07490840.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu011]
gi|308360645|gb|EFP49496.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu011]
Length = 436
Score = 80.4 bits (195), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|261881177|ref|ZP_06007604.1| hypothetical protein HMPREF0645_2720 [Prevotella bergensis DSM
17361]
gi|270332046|gb|EFA42832.1| hypothetical protein HMPREF0645_2720 [Prevotella bergensis DSM
17361]
Length = 307
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 42/135 (31%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + L + + +F + +L ++ + I ++GL+ +
Sbjct: 1 MKFFTNEVKIALVAIVGIVLLYFGLNFLKGTSVFSHNSTYYIK--FADINGLTESCPIYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G VG + + D L + + + A I + + G ++ L
Sbjct: 59 KGFQVGLVKEIQYDYSGKQGILVEFEADRALHIPYGSRAEIVSD-IMGSVHMNLILPDNR 117
Query: 121 KKTIFQIATERNQRA 135
+ + T
Sbjct: 118 QALLQPGDTIDGSIN 132
>gi|312141006|ref|YP_004008342.1| mce family protein mce4c [Rhodococcus equi 103S]
gi|325675357|ref|ZP_08155041.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|311890345|emb|CBH49663.1| putative Mce family protein Mce4C [Rhodococcus equi 103S]
gi|325553328|gb|EGD23006.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 331
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/303 (13%), Positives = 91/303 (30%), Gaps = 9/303 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K G + ++ + S ++L G GL + VR
Sbjct: 1 MTKKRNPAVTGALGIVVVLLATMSAFFLDSL-PIVGAGNRYTAEFTE-AAGLKPGNEVRV 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD + D + TTA+I+ + + G Y+ L E
Sbjct: 59 AGVKVGKVSDVALDGD---RVRVTFQ-TKDAWIGDQTTASIQIKTILGQKYLALDPRGTE 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + + +++ S + + + ++
Sbjct: 115 VLDPGTSIPLERTTSPYDVIDAFSDAATTLEDIDTTQLASSFEVLSQSFAGTPDEIRGSL 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ +S +A + K+ T+ T +N L Q +
Sbjct: 175 DGVARLSETVAKRDQELKKLFDATKQTSQILADRNDQFQKILANGGLLLEELNTRQQAIG 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q+L + Q S V + + Q V ++ + S ++
Sbjct: 235 QLLTSTQTLSRELT---GLVADNEAQITPALTQLQGVIDILNANQQNVSKALELAAPFYR 291
Query: 301 LEN 303
+
Sbjct: 292 IYA 294
>gi|229494613|ref|ZP_04388376.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318975|gb|EEN84833.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 343
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 90/297 (30%), Gaps = 10/297 (3%)
Query: 1 MESK-NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ + + LF ++ + + F LS + V+GL+ + V
Sbjct: 1 MKVRPGQVIRLSLFCLTGVACASFVANTLSVPVRGSTDSYSFE---FTDVEGLNPGNPVT 57
Query: 60 FNGIPVGRIVGLFLDQEYPN--HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ +GR+ + ++ I L A +R + G Y+ L+
Sbjct: 58 MSGVRIGRVDSVAFADNGGGTSKAIVDVEIESKYSLESDVRAAVRYGDMLGARYLALTQD 117
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + TP A K ++ +++ +
Sbjct: 118 DSATTVSARQLEPGDTIPLAQTTP----PINLTALMNGFKPLFAALQPEQVNTLTRSFVE 173
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T + ++T+L + ++ V + NT T D +
Sbjct: 174 TFNGQGQAMTTLLDQIATMSSGLVDRQDVFAQLLTNMNTLLTSVDERQPELVGLLDGLND 233
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
++ + + + V + + + F + Q+++ + + +
Sbjct: 234 LSTSVVGQNDQLVSLLDQGNRTVSSLAQIMGGSNGAFGQTVQQLESVTGSWIASTDE 290
>gi|120401975|ref|YP_951804.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954793|gb|ABM11798.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 351
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 54/135 (40%), Gaps = 7/135 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VGL + ++ + + +++ G A V GL VR
Sbjct: 1 MKYRG--ALVGLSLFMVVAVTLTWLVYVTLRRDVAGSTAPYAAVFTD-VFGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-K 119
G+ VGR+ + L + + +++ D + +T A++ Q + G Y+ LS
Sbjct: 58 AGVRVGRVEKIELQGD---LAKVSFVVQNDQQVLGTTVASVTYQNIVGQRYLGLSLGNTG 114
Query: 120 EKKTIFQIATERNQR 134
+ + + + +R
Sbjct: 115 DPRPLPAGSVIPLER 129
>gi|170079312|ref|YP_001735950.1| hypothetical protein SYNPCC7002_A2720 [Synechococcus sp. PCC 7002]
gi|169886981|gb|ACB00695.1| conserved hypothetical protein [Synechococcus sp. PCC 7002]
Length = 417
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 46/393 (11%), Positives = 135/393 (34%), Gaps = 12/393 (3%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ S+GLF+ + L + WL+ + + +R + + + + VR
Sbjct: 1 MRSRTLKEGSLGLFIFAGLSLLGVVLIWLTGA-TLGKRTYSINVRF-DNANAMQEGAIVR 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIR-PDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGRI+ + + I+ PD + GL G T +E+
Sbjct: 59 YRGLEVGRIIDVQPSSNG---VEIQIQIQTPDLIMPREVVVEANQGGLIGETSLEIIPQT 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + A + +++ ++ ++ + E
Sbjct: 116 ELTQAEMAQSPFAADCPEKGAILCDGTTLEGVIGVSFEQVLRNTTKFSELYGDPEFFEIV 175
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ I + + + +V + I+D + + +
Sbjct: 176 RTLADNSSDAAAQVAILTEELALLSQEVRGEVDNFAENAQAISDAAVTSSNQLN----RT 231
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ Q+ ++ V++ ++ T++ + T+ Q D L + + + T
Sbjct: 232 LEQVNTLTGNFNSLVVENRQALVGTLNSIGRTSDQMQRTLASFDTTLDTVNQNLSAANTE 291
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
L+N+ T+N ++ +++++ + + + + + + ++ S ++
Sbjct: 292 EILDNLTVLTANAATASENLKDVSTALNDPTNVLMLQKTL-DAARVTFENTQKITSDLDE 350
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
++ + D + +++++ + I
Sbjct: 351 LTGDPQFRKNLIDLVNGLSQLVSSTDQLQQQIQ 383
>gi|31794670|ref|NP_857163.1| MCE-family protein MCE4F [Mycobacterium bovis AF2122/97]
gi|121639413|ref|YP_979637.1| Mce-family protein mce4F [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991909|ref|YP_002646598.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31620267|emb|CAD95710.1| MCE-FAMILY PROTEIN MCE4F [Mycobacterium bovis AF2122/97]
gi|121495061|emb|CAL73547.1| Mce-family protein mce4F [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224775024|dbj|BAH27830.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length = 564
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|108798626|ref|YP_638823.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867722|ref|YP_937674.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|120401537|ref|YP_951366.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|126434223|ref|YP_001069914.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|145221248|ref|YP_001131926.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315441857|ref|YP_004074736.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|49072913|gb|AAT51764.1| TrnC4 [Mycobacterium vanbaalenii PYR-1]
gi|108769045|gb|ABG07767.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693811|gb|ABL90884.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|119954355|gb|ABM11360.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|126234023|gb|ABN97423.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|145213734|gb|ABP43138.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315260160|gb|ADT96901.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 448
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/352 (11%), Positives = 98/352 (27%), Gaps = 14/352 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T +GL ++ + +I +++ D V+ S +G+ VR
Sbjct: 1 MTN--SRTKLGLAIILVSLVVGGAIAVTRAAHELDR--VHVVAYFDNS-NGVFVGDDVRI 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGRI + P+ A I + L I+L+
Sbjct: 56 KGVRVGRIEAIEPQP---TQVRITFWFDAKYPVPADAKAVILSPTLVTSRAIQLTPGYTG 112
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKP 175
T+ AT R + + + +N+
Sbjct: 113 GPTLQNNATIPRARTAVPVEFDEFRQQLERLTALLQPTEPGEVSTLGSLVNTAADNLRGQ 172
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
I +S ++ H + + + + + + + +
Sbjct: 173 GPAIRDAIIRLSQSVSALADHSPDIFTSVRNLSTLVSALQDSTVLIRQLNQNLASVTGLL 232
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS-KMKS 294
+ ++ + ++ ++ + + V + T+ V Q + D +
Sbjct: 233 ANEPTEVGDAVKNLNDVVGEVTAFVAANRDTIGATSDKLTSVSQALTDSTDDIEQLLHIA 292
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
T + N+ S + + +D + + + + +
Sbjct: 293 PTTLSNAANLYQSAQGTLTGALNVANFSDPITFLCGAVQAASRLNNEQSAKL 344
>gi|111018966|ref|YP_701938.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110818496|gb|ABG93780.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 331
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 93/289 (32%), Gaps = 10/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + G + ++ + S ++L + G + GL + VR
Sbjct: 1 MSRRRSPAVAGALGILVVLLATLSAFFLDSL-PFIGAGSTYHAEFTE-AAGLKPSNEVRI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD + H + D + T+A+I+ + + G Y+ L +
Sbjct: 59 AGVKVGKVTSVELDGD---HVDVAFKV-SDAWVGNETSASIQIKTILGQKYLALDPRGSD 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + S +++ S + + E + ++
Sbjct: 115 TLNPSDVIPLDRTTSPYDVIEAFSAAAQTVGDIDSDQLAQSMITLSQAFEGTPTEIRASL 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHS----SDSKNTFNTITDLITSLDKMIKAIDL 236
+ +S +A+ + K+ T T + N + L+ +
Sbjct: 175 DGVSRLSQTIASRDQELQKLFDATGKTTKVLADRNAEFNRLISDAGLLLGELNSRQQSIS 234
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
Q + Q + + + + + + + + +D +
Sbjct: 235 QLLTGTQRLSQQLTGLVRDNEAAIGPALEQLDGVVEILKANNENLDKAM 283
>gi|291287313|ref|YP_003504129.1| Mammalian cell entry related domain protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290884473|gb|ADD68173.1| Mammalian cell entry related domain protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 545
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 56/352 (15%), Positives = 117/352 (33%), Gaps = 13/352 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG+FVV L L + D +V + GL+ DS V F+G+ VG
Sbjct: 6 EAKVGVFVVGCLLLISAMSLRLVDFSFSDSAGVKVTTIL-NDAAGLTKDSPVIFSGVEVG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+I + L+ ++A+ LI L + +R++G G Y E I Q
Sbjct: 65 KIREIKLE---NRKAVAELLINDQYELPANLKVLVRSKGFLGEKYAEFQL----DGDIAQ 117
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + I+ + + + + +++++ + ++
Sbjct: 118 GILKDGDILTQGNEGTDIDQLTNKLGGIADDVQAITASLREVLATDQAKANMSVTISNIR 177
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ N + + + IT T I A +
Sbjct: 178 DITDSVNKLVQNNEQRIDTIIMSMETLTTKLSEITVANTQNINDIMANINAITTDLKAQT 237
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ S N ++ + N D + + +D ++S S K K+ + ++D
Sbjct: 238 PLISENLRVVTESLKN---DGPTIASNVRSITDDVDEVMS--SQKENLKKAIENIAEVSD 292
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+++ I + + I + E+ NLN + + + KI+
Sbjct: 293 KLGKTVDNLNEITGKVNSGEGTIGRLVNDEDTVDNLNGALTGLRDTLGKIDQ 344
>gi|254392561|ref|ZP_05007739.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|197706226|gb|EDY52038.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 361
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 6/127 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+FV+ + ++ + G R V GL SVR G+ VG++ +
Sbjct: 33 VFVLVTTLATTVLALSIANTGV--GDTTSYRARFSD-VTGLIPGDSVRIAGVKVGQVDAV 89
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-KEKKTIFQIATE 130
+ + + ++ L S TA+I+ + G YI+L ++ T
Sbjct: 90 KVA--DRRVAEVRFSVQRGRGLPASATASIKYLNMVGQRYIDLDRGTGPVGASLPPGGTI 147
Query: 131 RNQRAMI 137
R
Sbjct: 148 PLDRTTP 154
>gi|111019738|ref|YP_702710.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110819268|gb|ABG94552.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 467
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 39/328 (11%), Positives = 89/328 (27%), Gaps = 12/328 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V V+SIL ++ I ++S V GL ++ V + GI VG +
Sbjct: 11 LVTFTVLSILSLTYALISYVSIERITGLRTYTVTADF-ADAGGLYENALVTYRGIDVGLV 69
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ L Q+ H I + ++TA IR+ G +++ E +
Sbjct: 70 TSIDLAQD--AHVRVTMQIEDAYQVPTASTAHIRSMSAVGEQFVDFVPTTDEGPYLVDGD 127
Query: 129 TERNQRAMIT---------ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
T + A + + + + ++ I +
Sbjct: 128 TVPTDQTETPVPAGEVIESANQLLQSIPKDSLDKAVDETFNTFDGTGPQIAQLIDSSAEL 187
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + I+ + ++ T S T + L L +
Sbjct: 188 VRLAQADLEPTRTLINDAEPLLTTGNEVSEDITSFTTDLSAFTEQLVLSDGQIRAVLDQG 247
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + + ++ + V + + ++I + S+ T
Sbjct: 248 PSAAATTTTTLTDLQPTFPLLMANLQTVGQVFRMNIPELRQILVIYPALSAVTNHSVTGF 307
Query: 300 FLENIADSTSNMRSSISAIREITDQRQK 327
L++ +
Sbjct: 308 QLDDDQRGPQAPLDIKLGNTLNPPPCTE 335
>gi|306799480|ref|ZP_07437782.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu006]
gi|308340329|gb|EFP29180.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu006]
Length = 435
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|148555468|ref|YP_001263050.1| hypothetical protein Swit_2554 [Sphingomonas wittichii RW1]
gi|148500658|gb|ABQ68912.1| Mammalian cell entry related domain protein [Sphingomonas wittichii
RW1]
Length = 164
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 47/134 (35%), Gaps = 4/134 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFVV F W + V P S G++ S VR G+ +G
Sbjct: 11 EALVGLFVVL-FAAWFVWFAWGATGGGAKAGAIHVTALFPNS-TGINVGSEVRVAGMKIG 68
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ LD + + P L ++A I ++G G T++ L + +
Sbjct: 69 TVTSQALDPQSF-QVKTTLALDPKVKLPADSSAAITSEGFLGATFVSLIPG-GDTVPLKD 126
Query: 127 IATERNQRAMITAT 140
T + + +
Sbjct: 127 GDTIADTQGAMDLM 140
>gi|306782574|ref|ZP_07420911.1| MCE-family protein mce4F [Mycobacterium tuberculosis SUMu002]
gi|308324779|gb|EFP13630.1| MCE-family protein mce4F [Mycobacterium tuberculosis SUMu002]
Length = 485
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|326775348|ref|ZP_08234613.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
gi|326655681|gb|EGE40527.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
Length = 343
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 10/131 (7%)
Query: 1 MESKNYYTSVG----LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+ ++ G V ++ ++ LS +N G R GL
Sbjct: 1 MKRRS---LAGPVTKSLVFIVVTVLATTVLGLSIANTGVGDTTTYKARFTD-ATGLIPGD 56
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
SVR G+ VG++ + + + +R L S TA+I+ + G Y++L
Sbjct: 57 SVRIAGVKVGQVESVKVA--DRRVAEVAFAVRKGRSLPASVTASIKYLNMVGQRYVDLDR 114
Query: 117 LRKEKKTIFQI 127
F
Sbjct: 115 GPGPVGRAFAP 125
>gi|126437559|ref|YP_001073250.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126237359|gb|ABO00760.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 580
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F V + +++L +V + GL +++V
Sbjct: 1 MLTRLTKLQLSIFAVVTVLTVGAISLFYLHLPAAVGIGAYDVTAKFTA-GGGLYENANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L + +A + TP+ + TAT+++ G Y
Sbjct: 60 YRGVTVGRVEKVGLADDG---VVASMRLNSGTPVPENVTATVKSVSAIGEQY 108
>gi|313201729|ref|YP_004040387.1| mammalian cell entry related domain-containing protein
[Methylovorus sp. MP688]
gi|312441045|gb|ADQ85151.1| Mammalian cell entry related domain protein [Methylovorus sp.
MP688]
Length = 566
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/412 (10%), Positives = 113/412 (27%), Gaps = 34/412 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQ 104
+ L S V + I VGR+ L + D + T +
Sbjct: 171 SEDLGSLDIGSPVYYRRIQVGRVASYQLGETGQDIKLQIFIDAPYDRYVTTDTRFWNASG 230
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ L + TI A+P+ + + + ++
Sbjct: 231 VDVSLGADGLKLKTQSVATIVAGGVAFASPMGSQASPADKDTEFTLTADQDTAMAPPDGQ 290
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
Q I ++ L + + + +++ T +
Sbjct: 291 AQYIQLKFDQSLRGLSLGAPVQFSGVD-----LGRVVSINLDYDPVKHRFPTVVGVLVYP 345
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ +++ + + + + + + + +
Sbjct: 346 ERMGRVLDKLPKLEGDNDRQAAVFMHAMVKQGLRAQARLGNILTGQLYIAMDFVPNAPKA 405
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
D +++ + T + + +++I +L+
Sbjct: 406 EMDVNARPINLPTINGSFD--------------RMQEQIANIVTKIEKMPLDSIAKHLDA 451
Query: 345 SSQKFAELMSKINN------ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
S + ++++N L++ +DA + M R T ++ + Q
Sbjct: 452 SLVNLDKTLTQVNTHVLPETTQTLQQTRQTMQDAGQTMQQARQTLSGVDNVLADDAPLSQ 511
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
N Q ++++Q T + + R+P+ ++ GR ++ KP
Sbjct: 512 NLGQ--------TLQEVQRTSRSLRELTDLLGRHPESLLRGRPADPAQMSKP 555
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 36/259 (13%), Positives = 75/259 (28%), Gaps = 14/259 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DG + ++ S+ GLS + V+F+G+ +GR+V + LD + ++ P
Sbjct: 288 DGQAQYIQLKFDQSLRGLSLGAPVQFSGVDLGRVVSINLDYD---------PVKHRFPTV 338
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
G +L + +F A + I +
Sbjct: 339 VGVLVYPERMGRVLDKLPKLEGDNDRQAAVFMHAMVKQGLRAQ-----ARLGNILTGQLY 393
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ ++ N TI NI + M + H S
Sbjct: 394 IAMDFVPNAPKAEMDVNARPINLPTINGSFDRMQEQIANIVTKIEKMPLDSIAKHLDASL 453
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + + LQ+ Q +++ + ++ V N + D +Q
Sbjct: 454 VNLDKTLTQVNTHVLPETTQTLQQTRQTMQDAGQTMQQARQTLSGVDNVLADDAPLSQNL 513
Query: 275 QEVGQKIDHLLSDFSSKMK 293
+ Q++
Sbjct: 514 GQTLQEVQRTSRSLRELTD 532
Score = 44.9 bits (103), Expect = 0.029, Method: Composition-based stats.
Identities = 34/450 (7%), Positives = 102/450 (22%), Gaps = 39/450 (8%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVG 66
+ V + + S WLS E+ I + GL + V++ + VG
Sbjct: 26 IWIVPIVAAAIGISMLVHAWLS-------EGPEITILF-RTATGLEAGKTPVKYKDVTVG 77
Query: 67 RIVGLFLDQEYP-NHSLAKALIRPDTPLYPSTTATI-----------RTQGLAGITYIEL 114
+ + L ++ + + + + L YI +
Sbjct: 78 AVTAITLSEDGSHVKVKVALMQSAKSLTSKDSRFWVVRPRIGASGISGVDTLLSGAYIGV 137
Query: 115 STLR-----KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ E + + + + + +
Sbjct: 138 DKGQAEETSSEFTGLEMPPPVVGDMPGKSFILKSEDLGSLDIGSPVYYRRIQVGRVASYQ 197
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDK------------MMHTTQVTPHSSDSKNTF 217
I+ + + TQ F
Sbjct: 198 LGETGQDIKLQIFIDAPYDRYVTTDTRFWNASGVDVSLGADGLKLKTQSVATIVAGGVAF 257
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ S L +++ + Q
Sbjct: 258 ASPMGSQASPADKDTEFTLTADQDTAMAPPDGQAQYIQLKFDQSLRGLSLGAPVQFSGVD 317
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
++ + D+ T + + + + + D++ + +
Sbjct: 318 LGRVVSINLDYDPVKHRFPTVVGVLVYPERMGRVLDKLPKLEGDNDRQAAVFMHAMVKQG 377
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ + + +L ++ + + + T + +++ I +I +
Sbjct: 378 LRAQARLGNILTGQLYIAMDFVPNAPKAEMDVNARPINLPTINGSFDRMQEQIANIVTKI 437
Query: 398 QNF-SQSGLNDIQNLVRKLQETVNHFDDCL 426
+ S + + L +T+ + +
Sbjct: 438 EKMPLDSIAKHLDASLVNLDKTLTQVNTHV 467
>gi|306786393|ref|ZP_07424715.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu003]
gi|308329029|gb|EFP17880.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu003]
Length = 545
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|293610803|ref|ZP_06693103.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827147|gb|EFF85512.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 226
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S++ +VG+FV+ FF +S + + + +V+GL + V
Sbjct: 1 MKSRSSELAVGIFVIIFGIALFFLAMKVSGLVGTNLNDSYTMKAQFDNVNGLKPRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 61 SGVTIGRVDSITLDPVT-RLATVTFGLDGKL 90
>gi|15610630|ref|NP_218011.1| MCE-family protein MCE4F [Mycobacterium tuberculosis H37Rv]
gi|15843106|ref|NP_338143.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|148663358|ref|YP_001284881.1| MCE-family protein Mce4F [Mycobacterium tuberculosis H37Ra]
gi|148824701|ref|YP_001289455.1| MCE-family protein mce4F [Mycobacterium tuberculosis F11]
gi|215413407|ref|ZP_03422091.1| MCE-family protein mce4F [Mycobacterium tuberculosis 94_M4241A]
gi|215429000|ref|ZP_03426919.1| MCE-family protein mce4F [Mycobacterium tuberculosis T92]
gi|215432462|ref|ZP_03430381.1| MCE-family protein mce4F [Mycobacterium tuberculosis EAS054]
gi|215447827|ref|ZP_03434579.1| MCE-family protein mce4F [Mycobacterium tuberculosis T85]
gi|218755271|ref|ZP_03534067.1| MCE-family protein mce4F [Mycobacterium tuberculosis GM 1503]
gi|253800536|ref|YP_003033537.1| MCE-family protein mce4F [Mycobacterium tuberculosis KZN 1435]
gi|254234080|ref|ZP_04927405.1| MCE-family protein mce4F [Mycobacterium tuberculosis C]
gi|254552596|ref|ZP_05143043.1| MCE-family protein mce4F [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260188546|ref|ZP_05766020.1| MCE-family protein mce4F [Mycobacterium tuberculosis CPHL_A]
gi|260202673|ref|ZP_05770164.1| MCE-family protein mce4F [Mycobacterium tuberculosis T46]
gi|260206861|ref|ZP_05774352.1| MCE-family protein mce4F [Mycobacterium tuberculosis K85]
gi|289445091|ref|ZP_06434835.1| MCE-family protein mce4F [Mycobacterium tuberculosis T46]
gi|289449196|ref|ZP_06438940.1| MCE-family protein mce4F [Mycobacterium tuberculosis CPHL_A]
gi|289555760|ref|ZP_06444970.1| MCE-family protein mce4F [Mycobacterium tuberculosis KZN 605]
gi|289576228|ref|ZP_06456455.1| MCE-family protein mce4F [Mycobacterium tuberculosis K85]
gi|289752215|ref|ZP_06511593.1| MCE-family protein mce4F [Mycobacterium tuberculosis T92]
gi|289755624|ref|ZP_06515002.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289759653|ref|ZP_06519031.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289763674|ref|ZP_06523052.1| MCE-family protein mce4F [Mycobacterium tuberculosis GM 1503]
gi|294995736|ref|ZP_06801427.1| MCE-family protein mce4F [Mycobacterium tuberculosis 210]
gi|297636150|ref|ZP_06953930.1| MCE-family protein mce4F [Mycobacterium tuberculosis KZN 4207]
gi|297733150|ref|ZP_06962268.1| MCE-family protein mce4F [Mycobacterium tuberculosis KZN R506]
gi|298526974|ref|ZP_07014383.1| mce-family protein mce4f [Mycobacterium tuberculosis 94_M4241A]
gi|306790762|ref|ZP_07429084.1| MCE-family protein mce4F [Mycobacterium tuberculosis SUMu004]
gi|306969619|ref|ZP_07482280.1| MCE-family protein mce4F [Mycobacterium tuberculosis SUMu009]
gi|313660481|ref|ZP_07817361.1| MCE-family protein mce4F [Mycobacterium tuberculosis KZN V2475]
gi|2924431|emb|CAA17731.1| MCE-FAMILY PROTEIN MCE4F [Mycobacterium tuberculosis H37Rv]
gi|13883452|gb|AAK47957.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|124599609|gb|EAY58713.1| MCE-family protein mce4F [Mycobacterium tuberculosis C]
gi|148507510|gb|ABQ75319.1| MCE-family protein Mce4F [Mycobacterium tuberculosis H37Ra]
gi|148723228|gb|ABR07853.1| MCE-family protein mce4F [Mycobacterium tuberculosis F11]
gi|253322039|gb|ACT26642.1| MCE-family protein mce4F [Mycobacterium tuberculosis KZN 1435]
gi|289418010|gb|EFD15250.1| MCE-family protein mce4F [Mycobacterium tuberculosis T46]
gi|289422154|gb|EFD19355.1| MCE-family protein mce4F [Mycobacterium tuberculosis CPHL_A]
gi|289440392|gb|EFD22885.1| MCE-family protein mce4F [Mycobacterium tuberculosis KZN 605]
gi|289540659|gb|EFD45237.1| MCE-family protein mce4F [Mycobacterium tuberculosis K85]
gi|289692802|gb|EFD60231.1| MCE-family protein mce4F [Mycobacterium tuberculosis T92]
gi|289696211|gb|EFD63640.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289711180|gb|EFD75196.1| MCE-family protein mce4F [Mycobacterium tuberculosis GM 1503]
gi|289715217|gb|EFD79229.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|298496768|gb|EFI32062.1| mce-family protein mce4f [Mycobacterium tuberculosis 94_M4241A]
gi|308332868|gb|EFP21719.1| MCE-family protein mce4F [Mycobacterium tuberculosis SUMu004]
gi|308352878|gb|EFP41729.1| MCE-family protein mce4F [Mycobacterium tuberculosis SUMu009]
gi|323717836|gb|EGB27027.1| MCE-family protein mce4F [Mycobacterium tuberculosis CDC1551A]
gi|326905336|gb|EGE52269.1| MCE-family protein mce4F [Mycobacterium tuberculosis W-148]
gi|328460267|gb|AEB05690.1| MCE-family protein mce4F [Mycobacterium tuberculosis KZN 4207]
gi|328864226|gb|AEB53196.1| MCE family protein 4F [Mycobacterium tuberculosis]
Length = 564
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|325123626|gb|ADY83149.1| toluene tolerance efflux transporter (ABC superfamily, PerI-bind)
[Acinetobacter calcoaceticus PHEA-2]
Length = 227
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S++ +VG+FV+ FF +S + + + +V+GL + V
Sbjct: 1 MKSRSSELAVGIFVIIFGIALFFLAMKVSGLVGTNLNDSYTMKAQFDNVNGLKPRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 61 SGVTIGRVDSITLDPVT-RLATVTFDLDGKL 90
>gi|306795292|ref|ZP_07433594.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu005]
gi|308336451|gb|EFP25302.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu005]
Length = 443
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|89902674|ref|YP_525145.1| hypothetical protein Rfer_3915 [Rhodoferax ferrireducens T118]
gi|89347411|gb|ABD71614.1| Mammalian cell entry related [Rhodoferax ferrireducens T118]
Length = 321
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 3/138 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G FV+ +L WL+R Q + +V GL ++VRF
Sbjct: 1 MENKSHALAAGAFVLVLLALLVALALWLTRDTQSQRI---YELSSAQAVTGLQPQATVRF 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D P + L + + P+ ST AT+ QG+ G+ +I+L
Sbjct: 58 KGVNVGKVSAIGFDPLQPGNVLIRIAVDDKAPITQSTFATLGFQGVTGLAFIQLDDSGSS 117
Query: 121 KKTIFQIATERNQRAMIT 138
K + + M
Sbjct: 118 KVALRADVQPPARIPMRP 135
Score = 41.1 bits (93), Expect = 0.39, Method: Composition-based stats.
Identities = 15/165 (9%), Positives = 46/165 (27%), Gaps = 9/165 (5%)
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
+ ++D + + + I + R Q + +
Sbjct: 147 RILGQLDETTQRVNKLLGDDNQKTVIGAIDNIGQAARGLQQ---FSDRTGQLLDPLVKDT 203
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
+ +S + + + + F+ M+ T +++++ ++
Sbjct: 204 TATLKIMQATSVRVGDSADEARA------SARAFRTVTERMNRPGGTLDQLSQGAGTLAA 257
Query: 396 NLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ Q + L + + + N NPQ ++ G
Sbjct: 258 SAQTLNTLTLPHLNHALGDTARMTRQVGRAAANVSDNPQSLLLGN 302
>gi|29832441|ref|NP_827075.1| mce-related protein [Streptomyces avermitilis MA-4680]
gi|29609560|dbj|BAC73610.1| putative mce(mammalian cell entry)-related protein [Streptomyces
avermitilis MA-4680]
Length = 363
Score = 80.4 bits (195), Expect = 6e-13, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 45/126 (35%), Gaps = 5/126 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
LF + + + + + P V GL +R G+ VG++ G+
Sbjct: 36 LFALVTMVATTLLAATIVNISL--TPEHTYRAVFSD-VTGLEKGDDIRVAGVRVGQVEGI 92
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + + + D PL ST A +R + L G Y+ L+ + + AT
Sbjct: 93 RI--KDRTLAEVTFTVGEDRPLLNSTGAVVRYRNLVGQRYVALTEGAGDATRLKPGATIP 150
Query: 132 NQRAMI 137
R
Sbjct: 151 LSRTQP 156
>gi|296179483|gb|ADG96488.1| MceB [Gordonia cholesterolivorans]
Length = 345
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 37/303 (12%), Positives = 88/303 (29%), Gaps = 14/303 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +G+F++ + + GP S GL T V+
Sbjct: 1 MNVTGPAIKLGIFLLVSALITGVLFVIVGDLR--FGPTKSYRAVFT-SASGLRTGDDVKL 57
Query: 61 NGIPVGRIVGLFLDQEYPN----HSLAKALIRPDTPLYPSTTATIRTQGLAGITY----- 111
G+ VG++ + + +E + + D + +T +I+ + L G Y
Sbjct: 58 AGVVVGKVTDVTVVREESTGPGLGAEIAMDVDSDIAVTEATDVSIKYKNLIGDRYVELKT 117
Query: 112 --IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
++ R E I T + + T++ + +
Sbjct: 118 PSTPVAPERPEGSVIPVAHTRPALDMDALVNGFKPLLTGVDPDQTNRLSAALVSVLNGRT 177
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
++I + +T +TI+ A S + + + ++ + S
Sbjct: 178 DDIGEVITQLGQLGKTIADRDATIGSVVTDLNTVLGTVDERKAAFSSMIGQMQRLVSGLA 237
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + I + + + + +R + I+ LL+
Sbjct: 238 ADRTTIMDGLTHIDSATSQLDSLLSQVRPDLTADIAHLRGLAANLNKNTTTINMLLNKLP 297
Query: 290 SKM 292
Sbjct: 298 EAY 300
>gi|182434830|ref|YP_001822549.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178463346|dbj|BAG17866.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 343
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 46/131 (35%), Gaps = 10/131 (7%)
Query: 1 MESKNYYTSVG----LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+ ++ G V ++ ++ LS +N G R GL
Sbjct: 1 MKRRS---LAGPVTKSLVFIVVTVLATTVLGLSIANTGVGDTTTYKARFTD-ATGLIPGD 56
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
SVR G+ VG++ + + + +R L S TA+I+ + G Y++L
Sbjct: 57 SVRIAGVKVGQVESVKVA--DRRVAEVAFAVRKGRSLPASVTASIKYLNMVGQRYVDLDR 114
Query: 117 LRKEKKTIFQI 127
F
Sbjct: 115 GPGPVGRAFAP 125
>gi|15828398|ref|NP_302661.1| putative secreted protein [Mycobacterium leprae TN]
gi|221230875|ref|YP_002504291.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|13093828|emb|CAC32126.1| putative secreted protein [Mycobacterium leprae]
gi|219933982|emb|CAR72694.1| putative secreted protein [Mycobacterium leprae Br4923]
Length = 516
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/315 (10%), Positives = 102/315 (32%), Gaps = 8/315 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V +++++ + +Y+L + + + + GL ++V + GI +G++
Sbjct: 10 LVLFAILTVISLTVLGVYYLQIPSLVGIGRYSLKAELSAT-GGLYPTANVTYRGIAIGKV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + A I + + A + + G Y++L + K +
Sbjct: 69 TDVEPTATG---AEATMSIDSRYKIPIDSAANVHSVSAVGEQYLDLVSSGNPGKYLAPGQ 125
Query: 129 TERNQRAMITATPSGINYFISNA----ENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
T + I P+ + A E + ++++ + + +++ +++T A ++
Sbjct: 126 TITKSKIPIEIGPALDSVNRGLAALPKEKIGSLLDETAQAVGGLGPALQRLVSSTQAIVD 185
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
T + + I S ++ + +++ + ++Q
Sbjct: 186 AFKTNITDVNDIIQNSGPILDSQVKSDNAIERWVHNLNVLAAQSARQDQHLKSILSQAAP 245
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ F D + T+ + + ++ +L +T++
Sbjct: 246 TADEVNTVFSDVRDSLPQTLANFEILIDMLKRYHHGVEQMLVFLPQGASIAQTASATFPN 305
Query: 305 ADSTSNMRSSISAIR 319
+ S
Sbjct: 306 MAALDLALSINQPPP 320
>gi|330892062|gb|EGH24723.1| PqiB family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 531
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/452 (8%), Positives = 105/452 (23%), Gaps = 48/452 (10%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-----------------IRIPGSVDG 51
+G+ +S + + + + P + + ++
Sbjct: 94 RIGVSGISGVDTLLSGAFIAADAGPERKPQTDFVGLEIPPPITYGERGKRFTLFSQNLGS 153
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L S V + I VG++ L ++ I D P + ++
Sbjct: 154 LDIGSPVYYRRIKVGQVTSYKLSEDGKG---VDLDIFIDAP--NDKYVSTESRFWNASGV 208
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + T + S I + + E
Sbjct: 209 DV--------------SVGADGLKVNTESLSSILAGGLAFLEPAYSSDPVTAEEGARFEL 254
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + V + D +
Sbjct: 255 FNDQEAALAPPDGKAHFISMSFKQPLRGLEINAPVEFLGVKIGRVVSVNLDYDPASKSFP 314
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ L K + D ++ L + +
Sbjct: 315 SMVGAIIYPDRL-------GKAHKRLVDLNGGKDDENAAAVLLATFVKQ--GLRAQAKTG 365
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + SA + + +
Sbjct: 366 NLITGQLYISLDFTRNPPPVVFDASARPLHIPTVAGDMDKVQEQLLAVVDKISKVPLDKI 425
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
++ +++S LK+ + + T +K + S+ +L S + L
Sbjct: 426 AINLNDSLSGLKQTINQVNT--ELLPQVNGTLQKTQETLASVNASLSADSPE-RQQLGQL 482
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
V +++ ++ R+P+ ++ GR +
Sbjct: 483 VTEVERAARSIRVLTDSLSRHPESLIRGRNRD 514
>gi|325282254|ref|YP_004254796.1| Mammalian cell entry related domain-containing protein [Odoribacter
splanchnicus DSM 20712]
gi|324314063|gb|ADY34616.1| Mammalian cell entry related domain protein [Odoribacter
splanchnicus DSM 20712]
Length = 393
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K + L + + + I +L +D I VDGL SSV +
Sbjct: 1 MKVK-REVKLALTAIVAVVILIWGINFLKAKALFDRNNVFYGIY--DRVDGLKVSSSVIY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G VG++ + E + L + + + +T A IR+ L G I L
Sbjct: 58 RGYSVGQVSAIQFTGERYDKVLVQFTVGKKLQISSNTIAAIRSADLMGSKAINLIPGDAT 117
Query: 121 KK 122
Sbjct: 118 TY 119
>gi|120405554|ref|YP_955383.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958372|gb|ABM15377.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 450
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 85/293 (29%), Gaps = 10/293 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG + L + + ++ E GL T V+ +G
Sbjct: 8 NQFVVG---IVGLALTIGIVLVSLNYDRLPFLQGKEYKAYFAE-AGGLKTGEDVQVSGFT 63
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + + LD + +L + D L T A I+T+GL G +E+++ + +
Sbjct: 64 VGDVKSIELDG---SLALVTFTVARDIRLGERTEAAIKTRGLLGTKMLEITSRGEGQLDG 120
Query: 125 FQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + IS + S+ + S + +
Sbjct: 121 PIPLERTTSPYQLPDALGDLAMTISGLNTDQLSESLRVLSATFADTPPQLRVAVEGVARF 180
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
ET++ A S + T V S+ + ++ + + A Q I
Sbjct: 181 SETLNERDAELRSLLGNADKATTVLAERSNQVVSLIANSNALLIELENQSAALDQISGNI 240
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ + + + + +++ + S
Sbjct: 241 SALSDQLVGFIAENRETLKPALDKLNGVLTIIDNRKERLQKSIHLLQQYSMSL 293
>gi|254819940|ref|ZP_05224941.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 445
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 97/308 (31%), Gaps = 20/308 (6%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDS 56
M++ + +G L F + ++ + GL +
Sbjct: 5 MKTFSERNPFIIGA---IGLGAVFTLMLVSLNYDKLPFFHSDRTYSAYFAE-AGGLEPGN 60
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V+ +G VG++ + LD L + + L T A I+ + + G +E+S
Sbjct: 61 HVQISGYRVGQVDSVELDGP---RVLVTFTVASNLRLGERTEAAIKLRTVLGSKVLEVSP 117
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + T S + + T+ ++ + K + +
Sbjct: 118 ---------RGEGQLTGPIPQQRTTSAYQLPDALGDLTATISGLNTDQLSKSLAVLANTF 168
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T T +++ +A +D+ + +++ T + L
Sbjct: 169 TDTPPDLKAAVQGVARFSQTLDERDGQLRTLLSNANKATTVLAKRSDEVAKLVRDTNALL 228
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+++ ++ SNN + Q+ + + R+T + + + ++ + ++
Sbjct: 229 RQLRSQSSALEQISNNLAALARQLKGFIAENRDTLKPALDKLNSVLAIVDNRKENVQKAL 288
Query: 297 TSAFLENI 304
+
Sbjct: 289 VGLNKYAL 296
>gi|332172345|gb|AEE21599.1| Mammalian cell entry related domain protein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 154
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 2/131 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ VGLFVV L +G + ++ GL S+V+
Sbjct: 1 MSSRKVEIMVGLFVVLTLAAGLLLALKAVNQGMSNGAETYTLYAKFDNIGGLKARSAVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +I T GL G Y+
Sbjct: 61 GGVIVGRVDSISLDPDGYTPV-VALKISQEYNKFPETSSVSILTSGLLGEQYVGFQPGFS 119
Query: 120 EKKTIFQIATE 130
+
Sbjct: 120 IDGIADLGEGD 130
>gi|306777844|ref|ZP_07416181.1| MCE-family protein mce4F [Mycobacterium tuberculosis SUMu001]
gi|308213824|gb|EFO73223.1| MCE-family protein mce4F [Mycobacterium tuberculosis SUMu001]
Length = 426
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|149193796|ref|ZP_01870894.1| hypothetical protein CMTB2_01888 [Caminibacter mediatlanticus TB-2]
gi|149135749|gb|EDM24227.1| hypothetical protein CMTB2_01888 [Caminibacter mediatlanticus TB-2]
Length = 470
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 44/131 (33%), Gaps = 7/131 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ VG+FV+ + + + + + I G++ S V+
Sbjct: 1 MKT---EIKVGIFVLLGIISLLIMTFQIKSFERLKENGYVLYA-IVNDASGINKKSRVKL 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + L K LI+ + + I + G Y+++ +
Sbjct: 57 RGVNVGVVDNMKLVNNG---VELKLLIKKGVKIPIGSMVAIAQDNVLGGKYLKIIPSHNK 113
Query: 121 KKTIFQIATER 131
++
Sbjct: 114 SYYKPGDTIDK 124
>gi|145221304|ref|YP_001131982.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213790|gb|ABP43194.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 523
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 85/289 (29%), Gaps = 6/289 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ GL + +L + + GL++ +VR G+
Sbjct: 7 SNRVRGGLMGIILLVVVIGVGQSFASVPMLF-ATPTYYAEFSDT-GGLNSGDNVRIAGVD 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + L +D + + T + + A IRT + G +E+ +
Sbjct: 65 VGTVRSLEIDGD---RVRIGYSL-GGTEIGTDSLAAIRTDTILGRRNMEIEPRGSDPLQA 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + A ++ + +S + + I+ L+ + +
Sbjct: 121 NGVLPLGQTTTPYQIYDAFFDVSKNTAGWDTQTVKESLNVLSETIDQTYPHLSAALDGVA 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
S + I +++ +++ + V+Q+LE
Sbjct: 181 RFSDTIGKRDDQIKQLLANANKVAGVLGNRSEQINQLFVNAQTLLAAVNERNYAVSQLLE 240
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ S D N + + + + + + SS K
Sbjct: 241 RVDTFSTQVRGFIDDNPNLNNVLEQLRVITDVLAARKLDITDTLSSLSK 289
>gi|302523374|ref|ZP_07275716.1| secreted protein [Streptomyces sp. SPB78]
gi|302432269|gb|EFL04085.1| secreted protein [Streptomyces sp. SPB78]
Length = 352
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+FV+ + ++ + V GL VR +G+ VG + +
Sbjct: 23 VFVLVTGVATAVLGLSIANTG-VGDDTTTYKALFSD-VTGLIDGDGVRISGVKVGEVTDV 80
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + + D L +TTA+++ + G Y+ L
Sbjct: 81 RVV--DHRTAQVTFTVDRDRALPATTTASVKYLNMVGQRYVSLERG 124
>gi|315443554|ref|YP_004076433.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261857|gb|ADT98598.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 367
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/343 (12%), Positives = 96/343 (27%), Gaps = 5/343 (1%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G V ++ R + GL+ + V +GI VG
Sbjct: 10 IRAGFIGVVLIILVIAVGLQPERLLSWATA-IRYQAMFTE-AGGLTVGNDVTVSGIKVGS 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + LD +L I L TTA IRT L G + L + Q+
Sbjct: 68 VSSIELD---NGDALVGFTIDGKYALGSDTTAHIRTGTLLGERVLALDSEGSGTLDPQQV 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + T + + + + ++ ++ S + + ++ I L T + +S
Sbjct: 125 IPTTRTSSPYSLTDAVSDLTSNTRDTDTEALNQSLDTLSQTLDQIAPQLGPTFDGLSRLS 184
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
L + + +++ T ++ L ++ + + +L NI
Sbjct: 185 QSLNSRNDSLAELLRTAGEVTGIFSERSKQVNTLILNSNDLLAVLNERRYAITSLLSNIS 244
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
S + E + +K L+ + +
Sbjct: 245 AVSQQLSGLVADNEAELAPALERLNNVTRMLEKNRDNLARMLPGAAKYYLTQGEIVSNGA 304
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
N ++ +I +++ +
Sbjct: 305 YYNALIPNIQPAQLLQPFLDYAFGFRNGVDIGQPPDNAGPRAQ 347
>gi|258645548|ref|ZP_05733017.1| mce-related protein [Dialister invisus DSM 15470]
gi|260402904|gb|EEW96451.1| mce-related protein [Dialister invisus DSM 15470]
Length = 382
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 48/129 (37%), Gaps = 4/129 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VG+F + I LS + + V +G+ + + + G+
Sbjct: 4 SQEAKVGVFSFIGILLFSVIIIQLSSAVLFGKSGFHVTAYFRE-AEGIEPGNPIHYAGVD 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + + ++ ++ D + +I+T + G ++++ +++ +
Sbjct: 63 VGMVDHISIE---NGEAVLVLRFYDDVKVPKDANFSIQTSSVMGGRFVKVVGGHQDRGYL 119
Query: 125 FQIATERNQ 133
+ T + Q
Sbjct: 120 REGMTVQGQ 128
>gi|71736848|ref|YP_274663.1| PqiB family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71557401|gb|AAZ36612.1| PqiB family protein [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 554
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/419 (10%), Positives = 110/419 (26%), Gaps = 35/419 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S V + I VG++V L ++ + D
Sbjct: 162 FGAKGTRFTLH-AEDMGSLDVGSPVYYRRIQVGQVVACHLSEDGKGVDAEIFINAPNDRF 220
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + L + T+ + +++P +
Sbjct: 221 VTTDTRFWNASGIGLTVDADGLKIKTESVSTLLAGGVAFVEPGYGSSSPRAAEHARFKLF 280
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+K I + + + + + N I + S
Sbjct: 281 EDQQKALSPPDGEPGYIRMMFRQSLRGLEVNSPVEFMGINLGRVISVDLDYDAANKSFSS 340
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
L + +K+++ + ++ + I +++ + + +
Sbjct: 341 IVGAVIYPERLGQANEKIVETLGTPDDSRTAQLIADFVKQGLRAQPRSASLLTG------ 394
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
L + + + + ++E + +S +
Sbjct: 395 ----------QLYISLEFFANAAPVQFDVNARPLIIPTVPGELEKMQEQVQLIVEKVSKL 444
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
++ I NLN S + + N + + + R T E +
Sbjct: 445 P-MQEIAGNLNGSLDEAHKTFKLFNA--------DVMPELHTVLGQSRSTMEIAGAALAE 495
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + ++Q T + RNP+ ++ GR + V P+
Sbjct: 496 --------DSPVRQQVSRTMDEVQRTARSVRVLTDYISRNPEALIRGRTRQDVPSVYPQ 546
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+ DG + + S+ GL +S V F GI +GR++ + LD + N
Sbjct: 287 LSPPDGEPGYIRMMFRQSLRGLEVNSPVEFMGINLGRVISVDLDYDAANK 336
>gi|306973962|ref|ZP_07486623.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu010]
gi|308356691|gb|EFP45542.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu010]
Length = 425
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V++++ S +I++L + V GL +++V
Sbjct: 1 MIDRLAKIQLSIFAVITVITLSVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + T + + TAT+R+ G Y
Sbjct: 60 YRGVAVGRVESVGLNPNG---VTAHMRLNSGTAIPSNVTATVRSVSAIGEQY 108
>gi|229494342|ref|ZP_04388105.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318704|gb|EEN84562.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 351
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 105/312 (33%), Gaps = 12/312 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+G+FV+ + + L + + GLS V G+P GR+
Sbjct: 36 LGIFVLVVGLGAA-----LGIPKLWYNVRTSAYTAELANASGLSDTDPVYVAGVPAGRVD 90
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L H + + D PL +TAT+R + + G Y+E+ + ++
Sbjct: 91 SIDLAGN---HVVVNFRLDKDQPLGNQSTATVRLKTVLGKRYLEIVPAGVVDDSDARVIP 147
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + + + + + ++I + +A I S
Sbjct: 148 LSRTTVPYSLDDVSSDATTAATGVDLQAMESMMNTLSQVIPTDSDQVGRALAGISGASAA 207
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
A N ID+++ ++ + ++ T A+ + Q+++N+ +
Sbjct: 208 FAQNSEQIDQILIMSRELSDMAAAQTDSIVGTAANAQTIVRTLAMRKDALTQLVDNLTII 267
Query: 250 SNNFV----KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ D+ ++ E T T + +ID LL+ S ++S S N
Sbjct: 268 ISKLSTTFVDRQDEFGAMTDNLVEVTTTLKNNADQIDLLLTRLPSALRSVTDSTGTGNWT 327
Query: 306 DSTSNMRSSISA 317
D +
Sbjct: 328 DVNAPAAVIPDN 339
>gi|260425867|ref|ZP_05779846.1| ABC transporter substrate binding protein [Citreicella sp. SE45]
gi|260420359|gb|EEX13610.1| ABC transporter substrate binding protein [Citreicella sp. SE45]
Length = 148
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG V++ + + + S++G++ S VR
Sbjct: 1 MTTSTTEVLVGGAVLAAAIAFGAYAVTSTGFS-LTEQGYPLTASF-RSLEGITAGSDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + G+ L+ E + ++ + + I ++GL G ++E+S
Sbjct: 59 AGVKVGTVTGISLNPETYR-ADMALSVQDGVQIPDDSAIVISSEGLLGGNFVEISPGGSM 117
Query: 121 KKT 123
Sbjct: 118 FYY 120
>gi|41408292|ref|NP_961128.1| hypothetical protein MAP2194 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396648|gb|AAS04511.1| hypothetical protein MAP_2194 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 526
Score = 80.0 bits (194), Expect = 7e-13, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 48/135 (35%), Gaps = 5/135 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F ++ + F + ++ V + +P + GL S+V
Sbjct: 1 MLTRFVRIQLTIFALASVVAMAFMFFQYMQVPTLLGIGKLTVTLELPDT-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G++ + + A + + A +R+ G Y++L +
Sbjct: 60 YRGVQIGKVTAVAPTATG---AKATLQLDTSPKIPADVHAAVRSMSAVGEQYVDLVPRSE 116
Query: 120 EKKTIFQIATERNQR 134
+ + +
Sbjct: 117 SGPYLCDGSVITARD 131
>gi|261415407|ref|YP_003249090.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261371863|gb|ACX74608.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302326329|gb|ADL25530.1| Mce-like protein [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 306
Score = 80.0 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/292 (12%), Positives = 90/292 (30%), Gaps = 5/292 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ Y SVGL V+ +F F +++L +R V L D V+ N
Sbjct: 3 KNTALYFSVGLVVLLAIFILIFGMFFL-NEKDLRETFDVYHLRFTQ-VSTLVLDDPVKIN 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +GR+ + L + + ++ + + + ++ G+ G I + E+
Sbjct: 61 GVKLGRVESIELSG---HRVVVTVRLKSNVKIPKDSEIRVQNIGIMGERQIGMILGDAEE 117
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ A I + + + + + E ++ T +
Sbjct: 118 YYVPGDTITGQFDAGIAEALGLAGEVCDSTKVLLEAVKTALNGTIANPEFQDRFKTLLVK 177
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+++ + ++ + + N + + NQ
Sbjct: 178 AENLEDRLMSLVTTTDPQLKKSLANLNKVTVKVNELVDGVKEPINGLFAGTDKVMGNANQ 237
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
++ +++ + + +V + T Q D L+ S
Sbjct: 238 LISDLEGVTKHLDGLIAKVQAKMDSKDNTVGILLNDRQLHDDLVKTVHSADS 289
>gi|299137712|ref|ZP_07030893.1| Mammalian cell entry related domain protein [Acidobacterium sp.
MP5ACTX8]
gi|298600353|gb|EFI56510.1| Mammalian cell entry related domain protein [Acidobacterium sp.
MP5ACTX8]
Length = 454
Score = 80.0 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/333 (10%), Positives = 104/333 (31%), Gaps = 19/333 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + Y +VG+F+++ I+ + ++ + +DG++ S V+
Sbjct: 1 MSRR--YLAVGIFIIAGATLFALGIFLIGNRHEAFSRHVLLYTEF-ADLDGIAKGSKVQV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLR 118
G+ G++ + + H + + + + T+ T+G+ G T++ + +
Sbjct: 58 AGMDAGQVTKIDIPNSPSGHFRVQMKVNESLHGLVRTDSVVTVDTEGVVGDTFLTIHSGS 117
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + S + + + + K+ ++
Sbjct: 118 PVAAIAQS-----DSVLQSKSPVSISDLLTHGLGVMNDADATIKQVGGKLGVTLDSANGA 172
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + + + N T ++L + ++ + +
Sbjct: 173 VGNANDLLVGLKQGRGPAGMLLRDEKMAGQIRESMSNVQATTSNLNQASGRVNSLVADVQ 232
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
Q+ + + + +S + ++ V+++ L D + + S
Sbjct: 233 QRQLPQKLDDTMTEIHSASTRADASIQQVQQSLT---------QALGPDANGVTAGQNIS 283
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIIST 331
L N+ +T NM A++ +
Sbjct: 284 EALTNVNAATGNMAEDTEALKHNFFFKGFFNHR 316
>gi|108798499|ref|YP_638696.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867599|ref|YP_937551.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108768918|gb|ABG07640.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693688|gb|ABL90761.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 479
Score = 80.0 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 40/135 (29%), Gaps = 4/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F + L + ++ V + +P GL +V
Sbjct: 1 MLTRRVKLQLAVFALVALIAGGIMAFGYVRVPAMLGIGQYTVTVELPQ-AGGLYQTGNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G VGR+ + L A + + A + + G Y+ L
Sbjct: 60 YRGTKVGRVSDVRLTDN--GGVEAVLSMDSSVAIPSDLDAEVHSTSAIGEQYVALVPRSD 117
Query: 120 EKKTIFQIATERNQR 134
+ + R
Sbjct: 118 DAPPLKNGDVIPVDR 132
>gi|145220615|ref|YP_001131293.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213101|gb|ABP42505.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 351
Score = 80.0 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 89/287 (31%), Gaps = 11/287 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GL + I+ + + +++ G V GL VR G+ VGR+
Sbjct: 7 LIGLSLFMIVAITLTWLVYVTLRRDVAGEKVPYSAMFTD-VFGLREGDDVRMAGVRVGRV 65
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL-RKEKKTIFQI 127
+ LD + +++ D + +T A++ Q + G Y+ L+ + E +
Sbjct: 66 EKIELDG---KLAKVSFVVQGDQQVLGTTVASVTYQNIVGQRYLGLTLGSQGEPVPLPAG 122
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKK------ISDSSRHIQKIIENIEKPLTTTIA 181
+ +R+ + + + + + +Q ++ + T
Sbjct: 123 SVLPLERSDPSFDVTTLLNGYEPLFSLLDPQAADDLTQGVIQSLQGDEASLVALVDQTSQ 182
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
E+ + + I + +DS + T T S+ + +
Sbjct: 183 LTESFAGHDEELGAVITDLNTVMSNLAKHNDSMDQVLTETQAAVSIFDAQRQELVDSTGS 242
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I + S + + Q + ++ ++
Sbjct: 243 ISRVVSRLSTVSDDVYPSLNELIEREPGFAQHLVSIEPQLAFTGANL 289
>gi|91792030|ref|YP_561681.1| hypothetical protein Sden_0668 [Shewanella denitrificans OS217]
gi|91714032|gb|ABE53958.1| Mammalian cell entry related [Shewanella denitrificans OS217]
Length = 330
Score = 80.0 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 90/288 (31%), Gaps = 1/288 (0%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
++G F++ + F ++ + S + +I+ GSV GL ++V+ G+ +G
Sbjct: 13 FAIGAFILGAILLIFTALLFFSG-GRLFAEKEPIIMYFDGSVQGLQVGAAVKLKGVIIGE 71
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I + +D + A + + L I+ I+ +
Sbjct: 72 ISDIRIDFPSDSSQKVTAAVSANLLLERIKLKGIQVDADFFSRAIDKGLRAQLNFQSLLT 131
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ TP + N + Q K L + +
Sbjct: 132 GLLYVELDFYPDTPILLRGEQDNVLELPTIATGFELFTQDFQSIDFKGLVDNVDKLAQEL 191
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ +A++ + + N FN + +++ + + Q+ ++
Sbjct: 192 SDIASSGQIQRTLTSFDTAAKAVETTANQFNHTQASLEKNAQVVLTRLDKLLLQLSQDEP 251
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ S ++ NT+ + + + L+ ++ +K
Sbjct: 252 KLLQSVQTSLTELRNTLMSLDKLAIEATGTLGQGSPLVIQLNNTLKEV 299
Score = 50.7 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/164 (9%), Positives = 57/164 (34%), Gaps = 7/164 (4%)
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ ++ L + D + S I++ +I + +E +
Sbjct: 162 ATGFELFTQDFQSIDFKGLVDNVDKLAQELSDIASSGQIQRTLTSFDTAAKAVETTANQF 221
Query: 343 NDSSQKFAE----LMSKINNISA--LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN 396
N + + ++++++ + ++ L + Q ++ R+T +++
Sbjct: 222 NHTQASLEKNAQVVLTRLDKLLLQLSQDEPKLLQSVQTSLTELRNTLMSLDKLAIEATGT 281
Query: 397 LQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
L S + + N ++++ + + P+ ++ G+
Sbjct: 282 LGQGSPLVI-QLNNTLKEVSRSARALRSLSETLDEQPESLLRGK 324
>gi|118463925|ref|YP_881726.1| virulence factor Mce [Mycobacterium avium 104]
gi|118165212|gb|ABK66109.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 441
Score = 80.0 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 98/308 (31%), Gaps = 20/308 (6%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDS 56
M++ + +G L F + ++ + GL +
Sbjct: 1 MKTFSERNPFIIGA---IGLGAVFTLMLVSLNYDKLPFFHSDRTYSAYFAE-AGGLEPGN 56
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V+ +G VG++ + LD L + + L T A I+ + + G +E+S
Sbjct: 57 HVQISGYRVGQVDSVELDGP---RVLVTFTVASNLRLGERTEAAIKLRTVLGSKVLEVSP 113
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + T S + + T+ ++ + K + +
Sbjct: 114 ---------RGEGQLTGPIPLQRTTSAYQLPDALGDLTATISGLNTDQLSKSLAVLANTF 164
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T T +++ +A +D+ + +++ T + L
Sbjct: 165 TDTPPDLKAAVQGVARFSQTLDERDGQLRTLLSNANKATTVLAERSDEVAKLVRDTNALL 224
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+++ ++ SNN + Q+ + + R+T + + + ++ + ++
Sbjct: 225 RQLRSQSSALEQISNNLAALARQLKGFIAENRDTLKPALDKLNSVLAIVDNRKENVQKAL 284
Query: 297 TSAFLENI 304
+
Sbjct: 285 VGLNKYAL 292
>gi|54302839|ref|YP_132832.1| putative paraquat-inducible protein B [Photobacterium profundum
SS9]
gi|46916263|emb|CAG23032.1| putative paraquat-inducible protein B [Photobacterium profundum
SS9]
Length = 548
Score = 80.0 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/397 (7%), Positives = 100/397 (25%), Gaps = 30/397 (7%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V + G VGR+ + D + ++ + IR++
Sbjct: 168 AGKLSVGDPVLYEGFTVGRVEKVSFDTDTKKA-------NYQLFIFQPYDSLIRSRTKFW 220
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
++ + + + + E ++ + + K+
Sbjct: 221 LSSGVDLQMSAQGFNLKIGSIESLITGGVSFRVPNGSEEGNLITKQMSLF--------KL 272
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
N + ++ +++ K +
Sbjct: 273 YNNFNTVRERIYDEYLEYVMLFDESVRGLNEGAPIEYRGIRIGTVKKVPLRLPTGEEGFS 332
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI---DHLL 285
+ ++ + + + +R + +T + + +
Sbjct: 333 SKQIPVLIRIELGRVYGNNGFDSLDGLKRNLEREFKGGLRGSLKTGNLLTGALFVDTEVY 392
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + L + + T+ ++ N + +
Sbjct: 393 KDEKMPPINSYDDYPLFPTKAGGFAEIQKQISGVLKKFNDLPVEDTLTSLTNTLNTSQKT 452
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ ++ + A K+ +L D ++++ + T
Sbjct: 453 LLASEKVAKSLDKLLAQKDTQALPNDMRKSLQEIQATLNGF------------GPDAVPY 500
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+++ + + ++ + L P +V+G +K
Sbjct: 501 RNLEGALARFEQVMKELQPVLRQLNEKPNSLVFGDDK 537
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------DQEYPNHSLAKALIR 88
E ++ SV GL+ + + + GI +G + + L + I
Sbjct: 286 EYLEYVMLFDESVRGLNEGAPIEYRGIRIGTVKKVPLRLPTGEEGFSSKQIPVLIRIE 343
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L I+ L + GP + ++ + +G+ + ++ + VG + + L
Sbjct: 22 LVPLVALVIGIWMLVQFVGSKGPEITLTLK---TAEGIEVGKTEIKSLNVKVGVVTEVKL 78
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + + + L T +
Sbjct: 79 SDDYTYITAKVQMDKDAERMLKEDTRFWV 107
>gi|296141466|ref|YP_003648709.1| hypothetical protein Tpau_3792 [Tsukamurella paurometabola DSM
20162]
gi|296029600|gb|ADG80370.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 332
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 22/120 (18%), Positives = 48/120 (40%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +KN ++ L V ++ + + + N DG + GL S VR
Sbjct: 1 MRAKNTRAAIWLAVALVITLLVAAGIYAALRNPVDGDTRGYEAHLSD-ASGLRVGSDVRL 59
Query: 61 NGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + + + N ++ + P+ +T ++ + L G +IE+
Sbjct: 60 RGVLIGKVTSVDVRGTDTGNEAVVGFTAQNQHPVTSTTQVAVKYRNLTGERFIEVQPGTS 119
>gi|226361061|ref|YP_002778839.1| Mce family protein [Rhodococcus opacus B4]
gi|226239546|dbj|BAH49894.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 331
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/289 (12%), Positives = 94/289 (32%), Gaps = 10/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + G + ++ + S ++L + G + + GL D+ VR
Sbjct: 1 MSRRRSPAVAGALGILVVLLATLSAFFLDSL-PFIGAGSTYHAQFTE-AAGLKPDNEVRI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + LD + + D + T+A+I+ + + G Y+ L +
Sbjct: 59 AGVKVGKVTSVELDGD---RVDVAFKV-SDAWVGNETSASIQIKTILGQKYLALDPRGSD 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + + + S +++ S + + E + ++
Sbjct: 115 TLNPSDVIPLDRTTSPYDVIEAFSAAAQTVGDIDSDQLAQSMVTLSQAFEGTPTEIRASL 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHS----SDSKNTFNTITDLITSLDKMIKAIDL 236
+ +S +A+ + K+ T T + N + L+ +
Sbjct: 175 DGVSRLSQTIASRDQELQKLFDATGKTTKVLADRNAEFNRLISDAGLLLGELNSRQQSIS 234
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
Q + Q + + + + + + + + +D +
Sbjct: 235 QLLTGTQRLSQQLTGLVRDNEAAIGPALEQLDGVVEILKANNENLDRAM 283
>gi|119469174|ref|ZP_01612158.1| putative transport protein (ABC superfamily, periplasmic binding
component) [Alteromonadales bacterium TW-7]
gi|119447426|gb|EAW28694.1| putative transport protein (ABC superfamily, periplasmic binding
component) [Alteromonadales bacterium TW-7]
Length = 182
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 41/114 (35%), Gaps = 5/114 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ VG FV + ++ + G + + ++ L + ++
Sbjct: 1 MNSRKLEILVGFFVALGILAFAMLALKVANAGISGSGETYSLNAKF-ENIGSLKARAPIK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
G+ +GR+ +++ + I +++ +I T G+ G Y
Sbjct: 60 VGGVVIGRVESIYVHPKEFLPV-VDMTIDAQYLCRFSDTSSISILTSGILGEQY 112
>gi|118468491|ref|YP_887176.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118169778|gb|ABK70674.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 343
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 38/129 (29%), Gaps = 5/129 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
G+F V + + + V L SVR G+ V
Sbjct: 7 TALKFGVFGVVMTLMTGVLFVIFGEYRSGSANTYSAV---FDDVSSLKPGDSVRVAGLRV 63
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + L + + K D L TT +R L G Y+EL +
Sbjct: 64 GTVNSVALQPDNT--VVVKFDADDDVRLTEGTTVKVRYLNLVGDHYLELVDEPGSARIQP 121
Query: 126 QIATERNQR 134
+ + R
Sbjct: 122 PGSQIGSDR 130
>gi|169631111|ref|YP_001704760.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243078|emb|CAM64106.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 334
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 88/293 (30%), Gaps = 17/293 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ +G+ V++ + + + N + +R GL VR
Sbjct: 17 RNRRNG-LIGVLVIAAVLAATGVAF----VNTSGMKTYALHLRAS---GGLRAGDDVRIA 68
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
GI VG++ + +D + A + P+ + A IR G Y+ L
Sbjct: 69 GISVGKVSTVRID---KSLVEATFTVDHAVPVGSESRADIRMLTPLGGHYLALYPEGSTP 125
Query: 122 KTIFQIATERNQRA------MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
I ER TP ++ +++++ + + +
Sbjct: 126 LGKTPIPPERTSIPFEINELFQKFTPVVKKVDAKVIHDSLMEVANAVDKYPNGLRDFFQS 185
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ I +E + +++ ++ + + S T + S
Sbjct: 186 SQSLIKALEPTTEDFHATLNYANEYLRAFKTGKEQLASIVTMMSKLGAKYSKSTTDLIEV 245
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + + + + ++N + D+ +T + E K
Sbjct: 246 FVLLRDLARIFDRFFKAYARDYEPMLNGLDDIVDTLTKYPEKLGKAAEQWGQL 298
>gi|117920365|ref|YP_869557.1| hypothetical protein Shewana3_1920 [Shewanella sp. ANA-3]
gi|117612697|gb|ABK48151.1| Mammalian cell entry related domain protein [Shewanella sp. ANA-3]
Length = 554
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/396 (8%), Positives = 99/396 (25%), Gaps = 21/396 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V + G VGR+ L + E + + I +Q
Sbjct: 172 AGKLSVGDPVLYEGFRVGRVETLGFNTER-REAFYQLFINK----PYDELVRDNSQFWLT 226
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+ + + + T + + + ++ DS +
Sbjct: 227 SGINMQLSAKGLNLQVGSLETLLSGGVSFCLPEGRLAGAKITEDGHDFRLYDSQELASQS 286
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + A + + F + +
Sbjct: 287 VYDKYLEFVMLFDESIRGLHDGATVEFRGITIGEVVKSPLTLQQLDPHFGRFSHGTIPVL 346
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I+ + + + + + + + + ++ T L +D
Sbjct: 347 VKIELARVFEHAEQVGLDNLRAEIERELHSGLRASLKTGNLLTGALFIDLD----LYADA 402
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + + T + + N + +
Sbjct: 403 KPYQTADFMGYPVFPTQRAGVAEIQKQVGQLISKLNNLPLEKTFSEVNTTLQNTASALAQ 462
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ ++ + ++ + +E SL + Q+ + T++ S ++
Sbjct: 463 WDKVGASLDQVLQQQEMMSLPAEIQQTLKAVSLTAKGYGPE------------SSVYAEL 510
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
Q +++LQ + + P ++ G + +
Sbjct: 511 QTSLQQLQTLMKELAPLSRQLNQKPNALILGADLPA 546
Score = 44.2 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
E ++ S+ GL ++V F GI +G +V
Sbjct: 290 KYLEFVMLFDESIRGLHDGATVEFRGITIGEVVK 323
>gi|283836260|ref|ZP_06356001.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Citrobacter youngae ATCC 29220]
gi|291067624|gb|EFE05733.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Citrobacter youngae ATCC 29220]
Length = 185
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLF++ L + F + I ++ GL S VR
Sbjct: 1 MQTKKNEIWVGLFLLIALLAALFVCLKAANVTSMRTEPTYTIYATFDNIGGLKERSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADISLDPKTY-LPRVTLEIESRFNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + +
Sbjct: 120 DPELGTSILKDGGTIQDTKSAMVLEDM 146
>gi|229494447|ref|ZP_04388210.1| virulence factor mce family protein [Rhodococcus erythropolis
SK121]
gi|229318809|gb|EEN84667.1| virulence factor mce family protein [Rhodococcus erythropolis
SK121]
Length = 430
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/327 (11%), Positives = 102/327 (31%), Gaps = 21/327 (6%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + +G V+ L + + ++ ++ S GL VR G+
Sbjct: 13 RKKWVLIGAGVLVALLVAGAAYLFIPGLG-----KTKISAHFV-STTGLYEGDVVRVLGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + + + I + A I Q L +++L+ + +
Sbjct: 67 NVGKVTKIEP---RDRDTYVEMKIDSSVDVPADAKALIVAQSLVSARFVQLTPVYSGGEQ 123
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTS------------KKISDSSRHIQKIIEN 171
+ +R + I ++ + + I ++ E+
Sbjct: 124 MPNGGEIPIERTAVPVEWDEIKTELTKLSDALGPEGLDDQGSLGRFIDTVGTNLDGNGES 183
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
I L A + T+S + S I + S++ F+ +TS+
Sbjct: 184 IRSTLRELSATMHTLSEGRTDLFSTIRNLQAFVTALSSSNEQIVQFSGHLASVTSVLASS 243
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + +S+ + +V + + TQ + +I+ +L +
Sbjct: 244 SDELGTALSDLDLAVGDVQRFVKDNSEGLSESVARLADATQVLTDKRPEIEQVLHSGPTS 303
Query: 292 MKSKETSAFLENIADSTSNMRSSISAI 318
+ + + + + S+
Sbjct: 304 LANFYQIYKPAQGSMTGAIALSNFKNP 330
>gi|21220884|ref|NP_626663.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|256787961|ref|ZP_05526392.1| secreted protein [Streptomyces lividans TK24]
gi|289771848|ref|ZP_06531226.1| secreted protein [Streptomyces lividans TK24]
gi|10798661|emb|CAC12797.1| putative secreted protein [Streptomyces coelicolor A3(2)]
gi|289702047|gb|EFD69476.1| secreted protein [Streptomyces lividans TK24]
Length = 354
Score = 79.6 bits (193), Expect = 9e-13, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 47/132 (35%), Gaps = 5/132 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+FVV + ++ ++ G + V GL SVR +G+ VG + +
Sbjct: 23 VFVVVTALATTVLGLSVAGTSVDSGTGTSTYKALFTDVTGLVDGDSVRISGVTVGEVTDV 82
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + +R D L STTA ++ + G Y+ L + E
Sbjct: 83 RVV--DRRTAQVTFTVRDDRTLPRSTTAAVKYLNMVGQRYVSLGRGSG---DLAGTLPEG 137
Query: 132 NQRAMITATPSG 143
+ TP+
Sbjct: 138 GTVPLDRTTPAL 149
>gi|299768646|ref|YP_003730672.1| mce related family protein [Acinetobacter sp. DR1]
gi|298698734|gb|ADI89299.1| mce related family protein [Acinetobacter sp. DR1]
Length = 227
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRS-NQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+S++ +VG+FV+ FF +S + + +V+GL + V
Sbjct: 1 MKSRSSELAVGIFVIIFGIALFFLAMKVSGLVGTNLSDSYTMKAQF-DNVNGLKPRAKVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 60 MSGVTIGRVDSITLDPVT-RLATVTFGLDGKL 90
>gi|296104906|ref|YP_003615052.1| putative ABC transport system substrate-binding protein
[Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295059365|gb|ADF64103.1| putative ABC transport system substrate-binding protein
[Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 182
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VG+F++ L + F + I ++ GL S VR
Sbjct: 1 MQTRKNEIWVGVFLLLALLAALFICLRAADITSVRTEPTYRIYATFDNIGGLKARSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADITLDEKTY-LPRVAMDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
>gi|16127924|ref|NP_422488.1| ABC transporter substrate-binding protein [Caulobacter crescentus
CB15]
gi|221236744|ref|YP_002519181.1| organic solvent resistance transport system Ttg2C protein
[Caulobacter crescentus NA1000]
gi|13425458|gb|AAK25656.1| ABC transporter, substrate-binding protein, putative [Caulobacter
crescentus CB15]
gi|220965917|gb|ACL97273.1| organic solvent resistance transport system Ttg2C protein
[Caulobacter crescentus NA1000]
Length = 170
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 3/127 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T++G+ V+++ + + G E+ + G L+ ++V G+ VG
Sbjct: 9 ETAMGVVVLALTAGFLTYSLTVGGVHMKRGD-YEISAKF-GEAGSLAPGAAVTVAGVKVG 66
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L+ + ++AK I P L +TA I + GL G ++ ++
Sbjct: 67 TVSQITLEPKTY-LAVAKLSIDPTVKLPADSTAKITSDGLLGGAHVAIAPGASLDDLKPG 125
Query: 127 IATERNQ 133
E Q
Sbjct: 126 GEIENTQ 132
>gi|288929562|ref|ZP_06423406.1| mce related protein [Prevotella sp. oral taxon 317 str. F0108]
gi|288329067|gb|EFC67654.1| mce related protein [Prevotella sp. oral taxon 317 str. F0108]
Length = 300
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 2/110 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + L ++ + FF + +L + ++ + GLS + +
Sbjct: 1 MKIFTREVKIALVAIAGVVILFFGMNFLKGLTLFSNDTGYKVM--FKDITGLSNSTPIYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
NG VG + G+ + + + + + +TA I + + +
Sbjct: 59 NGFAVGVVTGIQYNYDQKGDIVVTIDLDKSMRVPQGSTAEIESDFMGNVK 108
>gi|260752614|ref|YP_003225507.1| hypothetical protein Za10_0372 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|258551977|gb|ACV74923.1| Mammalian cell entry related domain protein [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
Length = 169
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 46/127 (36%), Gaps = 3/127 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
GLF+V + W V P + G+++ + VR G+ +G
Sbjct: 11 EALTGLFIVLATIGFAYYA-WNKTGGGVTAHAVHVKALFP-NAGGINSGTEVRVAGMKIG 68
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ LD + + + P+ PL ++A I + GL +YI L +K
Sbjct: 69 SVLDEQLDPQSY-QVMVNLALDPNIPLPLDSSAAITSDGLMSGSYIALIPGGSDKHLKEG 127
Query: 127 IATERNQ 133
Q
Sbjct: 128 DTIIDTQ 134
>gi|329113400|ref|ZP_08242181.1| Hypothetical protein APO_0166 [Acetobacter pomorum DM001]
gi|326697225|gb|EGE48885.1| Hypothetical protein APO_0166 [Acetobacter pomorum DM001]
Length = 183
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 1/125 (0%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ LF ++L + ++ + + G + S +GL + V G
Sbjct: 33 SRQNRAGACLFSGAVLAATLGFAFYAHGTQKSPGTNNYALSARFVSANGLERGADVDIAG 92
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VGR+ + LD + + L +T TI + L+ + +
Sbjct: 93 VKVGRVSSIVLDP-ATQMAFVHFTLDGALHLPQDSTLTISSATLSSENALMIEPGTSSTI 151
Query: 123 TIFQI 127
Sbjct: 152 APPNG 156
>gi|50086237|ref|YP_047747.1| toluene tolerance efflux ABC transporter periplasmic
substrate-binding protein [Acinetobacter sp. ADP1]
gi|49532213|emb|CAG69925.1| toluene tolerance efflux transporter (ABC superfamily, peri-bind)
[Acinetobacter sp. ADP1]
Length = 223
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 35/91 (38%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S+ + G+FV+ FF +S + + +V+GL + V
Sbjct: 1 MKSRTSELAAGIFVIIFGVALFFLAMKVSGLAGTNLSDPYTMTAQFDNVNGLKPRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 61 SGVTIGRVDAITLDPVT-RLATVTFDLDGKL 90
>gi|269958302|ref|YP_003328089.1| putative ABC transporter [Anaplasma centrale str. Israel]
gi|269848131|gb|ACZ48775.1| putative ABC transporter [Anaplasma centrale str. Israel]
Length = 154
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 45/115 (39%), Gaps = 4/115 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG+ V + + + LS Q+ + VDGL S VR +G+
Sbjct: 10 TEVVVGILVSAAVVMMGVYVTNRLSHEMQFYKGCYTIHAYF-ADVDGLKVGSEVRISGVN 68
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
VG + L LDQ + K I+ L ++AT+ L G Y+++
Sbjct: 69 VGSVTALHLDQNNIP--VVKMCIQKGLSLPIDSSATVTYADLLGKKYVDVMPGSD 121
>gi|295097680|emb|CBK86770.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 182
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTRKNEIWVGVFLLLALLAALFICLRAADITSVRAEPTYRVYATFDNIGGLKARSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADITLDEKTY-LPRVAMDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
>gi|258542231|ref|YP_003187664.1| toluene ABC transporter periplasmic protein [Acetobacter
pasteurianus IFO 3283-01]
gi|256633309|dbj|BAH99284.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-01]
gi|256636368|dbj|BAI02337.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-03]
gi|256639421|dbj|BAI05383.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-07]
gi|256642477|dbj|BAI08432.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-22]
gi|256645532|dbj|BAI11480.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-26]
gi|256648585|dbj|BAI14526.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-32]
gi|256651638|dbj|BAI17572.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-01-42C]
gi|256654629|dbj|BAI20556.1| toluene transporter substrate-binding periplasmic protein Ttg2C
[Acetobacter pasteurianus IFO 3283-12]
Length = 173
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 41/125 (32%), Gaps = 1/125 (0%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ LF ++L + + + + G + + S +GL + V G
Sbjct: 23 SRQNRAGACLFSGAVLAATLGFAVYAHGTQKSPGTDSYALSARFVSANGLERGADVDIAG 82
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VGR+ + LD + + L +T TI + L+ + +
Sbjct: 83 VKVGRVSSITLDP-ATQMAFVHFTLDGALHLPQDSTLTISSATLSSENALMIEPGTSSTI 141
Query: 123 TIFQI 127
Sbjct: 142 MPPNG 146
>gi|78777723|ref|YP_394038.1| hypothetical protein Suden_1526 [Sulfurimonas denitrificans DSM
1251]
gi|78498263|gb|ABB44803.1| Mammalian cell entry related [Sulfurimonas denitrificans DSM 1251]
Length = 300
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/288 (14%), Positives = 100/288 (34%), Gaps = 3/288 (1%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
YWL + +Q D M I SV GL+ D+ V+F GI VG++ L ++
Sbjct: 1 MLGFGYWLLKPSQ-DIEMKTYAIYFEESVLGLNLDAPVKFRGISVGKVTSLSINPNNSEE 59
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
+ + TP+ ST A + +QG+ G++YI LS + + + +I
Sbjct: 60 VVVLVSVLKSTPIKSSTMAQLTSQGITGLSYINLSYGDDSAPLLKK--EDAEAYPVIKTI 117
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
PS + + + + +SD+ + + + + + T + I N + +
Sbjct: 118 PSLLIKLENTLGDITLNLSDTLQRLSGALRDENQKEITLLLRNSNIFISKLNKTLDDETI 177
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ + + + + + + I + + +
Sbjct: 178 ENFQETMKNLNSASEKLDEMLPRIAKFIDSSIVWEDKISSSFGSISNSYLGIKESMDAFK 237
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ ++ +++ L + + + E + + + +
Sbjct: 238 SAVKSGDFNIKEITNDILPTLNNTLIEMQNLIIKMEETLRDHDRSPAD 285
Score = 40.3 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 30/192 (15%), Positives = 75/192 (39%), Gaps = 7/192 (3%)
Query: 254 VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLENIADSTSNM 311
S+ + + +T + K+++ L D + + S L + +
Sbjct: 97 DDSAPLLKKEDAEAYPVIKTIPSLLIKLENTLGDITLNLSDTLQRLSGALRDENQKEITL 156
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-----NNISALKENN 366
S I + TI + NLN +S+K E++ +I ++I + +
Sbjct: 157 LLRNSNIFISKLNKTLDDETIENFQETMKNLNSASEKLDEMLPRIAKFIDSSIVWEDKIS 216
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
S F + +++ + + S N++ + L + N + ++Q + ++ L
Sbjct: 217 SSFGSISNSYLGIKESMDAFKSAVKSGDFNIKEITNDILPTLNNTLIEMQNLIIKMEETL 276
Query: 427 NNFERNPQDIVW 438
+ +R+P D+++
Sbjct: 277 RDHDRSPADVLF 288
>gi|56696138|ref|YP_166494.1| paraquat-inducible protein, putative [Ruegeria pomeroyi DSS-3]
gi|56677875|gb|AAV94541.1| paraquat-inducible protein, putative [Ruegeria pomeroyi DSS-3]
Length = 804
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/399 (8%), Positives = 105/399 (26%), Gaps = 5/399 (1%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--FLDQEYPNHSLAKAL 86
S EV+ GSV GL S V F G+ VG++ L +D+ +
Sbjct: 286 SLLGDSLQATVEVMSSFDGSVRGLKLGSEVVFRGVKVGQVRHLSAEIDESVEGKPDIRMQ 345
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ-RAMITATPSGIN 145
+ + T + + + + + P
Sbjct: 346 VIYTIEPGRLGLHDVSTPDDTLSLLATMVARGGVRAQLMPASFFSGGLVVQLQENPDAPA 405
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + L A A +
Sbjct: 406 ATLDREATPFPIMPSLPTPADTLAVASQNVLDRVAALPVEELMQRAIETLENVNTILADG 465
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
T + + + + + + N ++ + + +++ +
Sbjct: 466 DTRRIPADLRDMLGNVNAVAGSESLRNLPEDLRQALASVNAVLAHFEEEEGAQKLVAALE 525
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS--NMRSSISAIREITD 323
++R + L+ D + + + + + + ++ ++
Sbjct: 526 ELRTAATGISAASADLPALVRDIDALVAKADALPLEQVVTSADQVLQTADTLLRSDDVER 585
Query: 324 QRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTS 383
+ + + E ++ +++ +S + D + A S
Sbjct: 586 VPAALNAALAQAEQTLVSIREAAGSVNSTLSTFEEKKVAQTLVDALGDMRTAAANVETAS 645
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
++ + + I + + L D+ ++ ++ + F
Sbjct: 646 AELPQLVADIDRLIATANALPLADVTASADRVLQSADAF 684
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/186 (10%), Positives = 60/186 (32%), Gaps = 11/186 (5%)
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ QT + + ++ + + +T+N
Sbjct: 619 EEKKVAQTLVDALGDMRTAAANVETASAELPQLVADIDRLIATANALPLADVTASADRVL 678
Query: 326 QKIISTIN--TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFR--- 380
Q + + ++ + L + ++ + ++ A++ N + A A +
Sbjct: 679 QSADAFLRNEDMDKVPGALAGALEEAQRALEELRQGGAVENLNRTLQTASTAADSVALAV 738
Query: 381 ----DTSEKINRYIPSIGNNLQNFS--QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
D + +++ S + + ++Q + L+ TV + + R P
Sbjct: 739 QTLPDLAARLDALADSAEATIGAYGPGSPVNREVQAAIGDLRATVRSLNALVQAIRRKPN 798
Query: 435 DIVWGR 440
++ GR
Sbjct: 799 SLLVGR 804
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 40/421 (9%), Positives = 124/421 (29%), Gaps = 30/421 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD----------- 90
++ I +S + + G+ +G+I + D + L + P+
Sbjct: 168 VVLIAPDSGSVSVGAPILHKGVQMGKIAAVRYDALSGSVLLTGFIEAPNDKLINSATRFW 227
Query: 91 -------------TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
L + A++ G+A T + ++ ATE + R +
Sbjct: 228 NVSGAGLELGEGGIQLKVDSLASLLQGGVAFDTAMSGGEALGKRPIFDLYATEDSARDSL 287
Query: 138 TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI 197
+ ++ + S + + + + + E++ + I
Sbjct: 288 LGDSLQATVEVMSSFDGSVRGLKLGSEVVFRGVKVGQVRHLSAEIDESVEGKPDIRMQVI 347
Query: 198 DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSS 257
+ S +T + + ++ + + + L + + ++
Sbjct: 348 YTIEPGRLGLHDVSTPDDTLSLLATMVARGGVRAQLMPASFFSGGLVVQLQENPDAPAAT 407
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
T + + T + + D + + +E ++ + + +
Sbjct: 408 LDREATPFPIMPSLPTPADTLAVASQNVLDRVAALPVEELMQRAIETLENVNTILADGDT 467
Query: 318 IREITDQRQKIIST-----INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
R D R + + ++ N+ +L + +++ ++ + ++
Sbjct: 468 RRIPADLRDMLGNVNAVAGSESLRNLPEDLRQALASVNAVLAHFEEEEGAQKLVAALEEL 527
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
+ A S + + I + L + ++ +T + ++ ER
Sbjct: 528 RTAATGISAASADLPALVRDIDALVAKADALPLEQVVTSADQVLQTADTLLRS-DDVERV 586
Query: 433 P 433
P
Sbjct: 587 P 587
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
V L V + + ++ Y + I G+ D + +RF + VGR
Sbjct: 25 LVWLVPVVAVAGALALVW-----QSYSNRDIPIRIEF-ADATGIEVDKTEIRFREVSVGR 78
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ G+ ++ + + +A I + Y + A
Sbjct: 79 VSGMRFSED-LSRVIVEAEIHRELERYLDSDAR 110
>gi|262370599|ref|ZP_06063924.1| toluene tolerance efflux transporter [Acinetobacter johnsonii
SH046]
gi|262314399|gb|EEY95441.1| toluene tolerance efflux transporter [Acinetobacter johnsonii
SH046]
Length = 224
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 36/91 (39%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S+ +VG+FV+ FF +S + + +V+GL + V
Sbjct: 1 MKSRASELAVGIFVILFGIALFFIAMRVSGLVGSNLSDRYEMSATFDNVNGLKPRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +G++ + LD + +
Sbjct: 61 SGVKIGQVDQISLDPVT-RLATVSFSLDGKL 90
>gi|27376085|ref|NP_767614.1| hypothetical protein bll0974 [Bradyrhizobium japonicum USDA 110]
gi|27349224|dbj|BAC46239.1| bll0974 [Bradyrhizobium japonicum USDA 110]
Length = 273
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/122 (19%), Positives = 48/122 (39%), Gaps = 2/122 (1%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +G ++++ +F + + + ++ GS GL V F+G+
Sbjct: 3 RASNLVIGTATLAVIAVAFGGLLGVQKWRTIQSRSQLRVVFEGGSASGLRRGGPVNFDGV 62
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
G+I+ + LD P +A ++ P+ T A I QGL G+ + L
Sbjct: 63 LAGQILSIKLD--NPRKVVALVMLDNSAPIRKDTVAGIEFQGLTGVAAVSLIGGAPSAPP 120
Query: 124 IF 125
+
Sbjct: 121 VP 122
>gi|126663652|ref|ZP_01734648.1| hypothetical protein FBBAL38_11299 [Flavobacteria bacterium BAL38]
gi|126624235|gb|EAZ94927.1| hypothetical protein FBBAL38_11299 [Flavobacteria bacterium BAL38]
Length = 317
Score = 79.6 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 4/122 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ V+ +F + +L + ++ ++ +V GL + V NG+ +G
Sbjct: 6 EIKTAVLVIVSIFLFIWGYNFLKGKDLFESSTRVYVVY--DNVAGLVNSAPVTLNGLAIG 63
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + + + L + I D P+ S+ A I GL G I + ++K I
Sbjct: 64 KVNAITIQPD--GKLLVEMQINTDFPISNSSIAEIYDSGLVGGRQIAIKPNFQDKNYIKT 121
Query: 127 IA 128
Sbjct: 122 GD 123
>gi|315441808|ref|YP_004074687.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260111|gb|ADT96852.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 523
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/289 (12%), Positives = 85/289 (29%), Gaps = 6/289 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ GL + +L + + GL++ +VR G+
Sbjct: 7 SNRVRGGLMGIILLVVVIGVGQSFASVPMLFAKPTYY-AEFSDT-GGLNSGDNVRIAGVD 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + L +D + + T + + A IRT + G +E+ +
Sbjct: 65 VGTVKSLEIDGD---RVRIGYSL-GGTEIGTESLAAIRTDTILGRRNMEIEPRGSDPLQA 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + A ++ + +S + + I+ L+ + +
Sbjct: 121 NGVLPLGQTTTPYQIYDAFFDVSKNTAGWDTQTVKESLNVLSETIDQTYPHLSAALDGVA 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
S + I +++ +++ + V+Q+LE
Sbjct: 181 RFSDTIGKRDDQIKQLLANANKVAGVLGNRSEQINQLFVNGQTLLAAVNERNYAVSQLLE 240
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ S D N H + + + + + SS K
Sbjct: 241 RVDTFSTQVRGFIDDNPNLNHVLEQLRVITDVLAARKLDITDTLSSLSK 289
>gi|54024944|ref|YP_119186.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54016452|dbj|BAD57822.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 338
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 50/340 (14%), Positives = 118/340 (34%), Gaps = 9/340 (2%)
Query: 1 MES-KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + L + + + + + + G G V GL D+ VR
Sbjct: 1 MRTPRAAAVR--LLGLLAVVIAILLLVVAAITRPVGGRTLVYRAEF-GDVFGLQDDADVR 57
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG+I G+ L E+ +L + +R + L IR Q L G Y+ +
Sbjct: 58 VRGVQVGKITGISLTAEH--RALVRFTLRTEHRLRAGDRLAIRFQNLTGQRYLAVLPAET 115
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A R+ T E + + +R++ +IE LT
Sbjct: 116 PGAPLDPAAPVRDTIDSFDITTVFNGLRPLLREADPQVYNRFARNLVAMIEGTGSDLTPL 175
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ ++ +++ + + I ++ ++ + M A +++
Sbjct: 176 LRDLGALASYAEDRTAVIATIVTNLDGLAQKLRGRSANLENILRVFHSIFMPVASRMEEF 235
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++E V + V+S+D + + R+++ ++I + D ++ ++S
Sbjct: 236 LSLMEKGSVEMSEIVRSADALGRLLLGARDSSDAM---TERIRQAIPDTTAAVRSLTALP 292
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
L ++ + + T + + ++T
Sbjct: 293 GLLASLNALIPRSEPRNRCADGTLTPPVAAAVLVQGRHLT 332
>gi|161506126|ref|YP_001573238.1| hypothetical protein SARI_04314 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160867473|gb|ABX24096.1| hypothetical protein SARI_04314 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 183
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRTEPTYKVYATFDNIGGLKVRSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVEDISLDPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLSLNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + + +
Sbjct: 120 DPELGTSILKDGSTIQDTKSAMVLEDM 146
>gi|124515843|gb|EAY57352.1| probable mammalian cell entry related domain protein
[Leptospirillum rubarum]
Length = 325
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/309 (13%), Positives = 85/309 (27%), Gaps = 15/309 (4%)
Query: 1 MESKNY----YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+ + VGL V +I + + I +V GL+ +
Sbjct: 3 MKRSSNLKLSEIRVGLIVGISFLLGALAIVTYGKVQNLFSKQVPLTILF-DNVRGLTVGA 61
Query: 57 SVRFNGIPVGRIVGL---FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
VR +G+ G + + + + L T+A IRTQGL GI ++E
Sbjct: 62 PVRISGMNSGFVKSIHFVRFHNQQLIQVRIRLSASRLPDLSEETSAVIRTQGLMGIKFLE 121
Query: 114 LSTLRKEKKTIFQIATERN-------QRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
L K I + +S + +
Sbjct: 122 LIPGDLSKGPINPALPIYGKATLTMETVLGKGSDLVKNLKNLSISMQELMEQVREGHGTV 181
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ I +V + + + + + ++ S
Sbjct: 182 GRFMTKPELYDNLDQATREIRSVAEDVNHGKGPVSSLIHSREMTRRLNDILRHLDGVMAS 241
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
LD ++ + + +S + + + + +GQK+D L
Sbjct: 242 LDDPQGSLGMLARDPATAGDLRTSIHAMAGILKDLKAGKGTAGQILVDPAMGQKMDATLD 301
Query: 287 DFSSKMKSK 295
++ +
Sbjct: 302 RVNALLDDM 310
>gi|294054792|ref|YP_003548450.1| Mammalian cell entry related domain protein [Coraliomargarita
akajimensis DSM 45221]
gi|293614125|gb|ADE54280.1| Mammalian cell entry related domain protein [Coraliomargarita
akajimensis DSM 45221]
Length = 336
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 37/99 (37%), Gaps = 5/99 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K +G FV + ++ + + +++ SV+GL+ S V++
Sbjct: 1 MNRKPSAALIGGFVTIGTLLLIGLTMYFGATS-FSSDVTRMVLFFDQSVNGLAVGSQVKY 59
Query: 61 NGIPVGRIVGLFL----DQEYPNHSLAKALIRPDTPLYP 95
G+P+G + + + +E N I L
Sbjct: 60 RGVPIGYVERIQIRVKGQREDSNAIPIVVAIDNALTLEK 98
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 67/173 (38%), Gaps = 4/173 (2%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
T KI ++ K + +F +N+ +++ ++ E
Sbjct: 159 MPTVSTSLDKIAADMAMIVEKASDFDFESFDKNLNHLIASIGQAMDNYNEAGVSESIARL 218
Query: 331 TINTIENI-TSNLNDSSQKFAELMSKINNISAL--KENNSLFKDAQRAMHTFRDTSEKIN 387
T + + + L + + + + +++ + A E+ +L + F + + I+
Sbjct: 219 ADQTTKFVESGELEATMSEIRKTIREVSTVIASYDLEDGALGERVDLVSARFFKSMDTID 278
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ S+ +L + S S + ++Q +R+L + ERNP ++ GR
Sbjct: 279 GVVESLDEHLVSDS-SLMYELQGTLRELGRAAETLRHFVAYLERNPNALISGR 330
>gi|169631672|ref|YP_001705321.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243639|emb|CAM64667.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 350
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 5/117 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ ++GL + + ++ + + G V G+ VR
Sbjct: 1 MKN-FRAAAIGLSLFVVFAIGVTTLVYGTLRRDTTGSTKNYTAIFTD-VTGVRVGDDVRI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + LD + + K ++ + LY +T + Q + G YI LS
Sbjct: 59 AGVRVGRVDSIELDG---SLAKLKFRVKSNQNLYGNTIVAVTYQNIIGQRYISLSRG 112
>gi|108800632|ref|YP_640829.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119869771|ref|YP_939723.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771051|gb|ABG09773.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119695860|gb|ABL92933.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 564
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/321 (10%), Positives = 90/321 (28%), Gaps = 13/321 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + +F ++ + I+ ++ V + +P GL S+V
Sbjct: 1 MLTRFVRTQLIIFTIASIVGVSVMIFAYMKVPTLLGIGRLTVTLELPA-AGGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G+++G+ L + + A + + A +R+ G Y+EL
Sbjct: 60 YRGVQIGKVMGVNLTENG---AEATMSLDTSPKVPADLLAEVRSVSAVGEQYVELLPQTD 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + RA I + +S ++ +I + +++
Sbjct: 117 SGPYLEDGSRISRDRATIPQEVGPMLDQLSALVDSI--------PSDRIPDLLDETFKAL 168
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
++L + + T D T +
Sbjct: 169 NGAGPDFQSLLDSASKVAGDANAVSDQTRQLIDDVGPLLDSQAESTEAIRTWARSLAGVT 228
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q+++N + + + T + + + + + E
Sbjct: 229 EQLVQNDPELRTVLQQGPGFAQEVSQLLTQIKPTLPILLANLTSVTQVLLTYNPALEQLL 288
Query: 300 FLENIADSTSNMRSSISAIRE 320
+ +
Sbjct: 289 VIFPGIIAAQQSFGLPQNNPT 309
>gi|54027080|ref|YP_121322.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018588|dbj|BAD59958.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 358
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/288 (17%), Positives = 103/288 (35%), Gaps = 13/288 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T + +FV LF + ++ Y G E R V L+ VR G+ VG+
Sbjct: 13 TKLAVFVAVTLFVTTVLALSIAN---YTGGGTEFKARFTD-VTALNPGDEVRIAGVRVGK 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK-KTIFQ 126
+ + + + K + L STTATIR + L G YI L E+ + + +
Sbjct: 69 VTDVAIV--DKRLAEVKFELTDRDWLPASTTATIRYRNLVGQRYIALEQGAGEQGRKLNE 126
Query: 127 IATERNQRAMITATPSGINYFIS------NAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
AT +R + + AE+ +K + + Q I + +T
Sbjct: 127 GATIPLERTRPALNLTTLFNGFRPLFRTLTAEDVNKLSYEIIQVFQGEQGTIHDLVVSTA 186
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I+ A + + + D + T+ + S + + V+
Sbjct: 187 SLTNKIADKDAVIGELVRNLTAVLEAVNQRDDQFDQLIVNTEALVSGLAAERDTIGRSVS 246
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + +++ V + + ++ + + T +++ L++
Sbjct: 247 SLGNLAEATADLLVPTRPTLQGSIAGLSQLTGELNSRSGEVNEALANL 294
>gi|315443155|ref|YP_004076034.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261458|gb|ADT98199.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 453
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/292 (15%), Positives = 91/292 (31%), Gaps = 7/292 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G V I + +D P E GL+TD++V+ +G V
Sbjct: 8 NQLVIGAVGVGITAAIVLGATNYDKIPLFD-PGREYTAHFAE-AGGLTTDAAVQVSGFKV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + LD L + L T A I+T+GL G +E+ + ++
Sbjct: 66 GQVKSIELDGP---QVLVTFTVDKGIRLGDRTEAAIKTKGLLGTKILEVIARGEGQQDGT 122
Query: 126 QIATERNQRAMITATPSGINYFISNAENT--SKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ ++ IS + S+ + S ++ +
Sbjct: 123 IPIDRTTSPYQLPDALGELSATISGLDTDQLSESLRVLSATFADTPPQLKIAVEGVARFS 182
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+T++ A + T V S+ + T+ + + + A Q I
Sbjct: 183 DTLNARDAQLRGLLANANKATTVLAERSEQVVGLVSNTNALLAELQNQSAAVDQISGNIS 242
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q ++ D + + + +++ LS + S
Sbjct: 243 ALSQQLQGFIGENRDTMKPALDKLNGVLTILDNRKERLQKSLSLLNDYSMSL 294
>gi|126741249|ref|ZP_01756928.1| hypothetical protein RSK20926_17462 [Roseobacter sp. SK209-2-6]
gi|126717654|gb|EBA14377.1| hypothetical protein RSK20926_17462 [Roseobacter sp. SK209-2-6]
Length = 150
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/122 (17%), Positives = 45/122 (36%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V++ ++ +Q E+ S++G++ + VR
Sbjct: 1 MSHNPTEVLAGGVVLAAAIGFALYAGQVAGLSQ-STAGYELTASF-RSLEGVNVGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + G+ L+ E + + + + A I ++GL G ++E+
Sbjct: 59 AGVKVGTVTGVALNSETFR-ADTSFSVIDGIEIPDDSAAVISSEGLLGGNFVEIMPGGSP 117
Query: 121 KK 122
Sbjct: 118 FN 119
>gi|269128027|ref|YP_003301397.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268312985|gb|ACY99359.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 352
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/281 (11%), Positives = 77/281 (27%), Gaps = 8/281 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+ + Y L+ + + GL S V+ GI VG + + L
Sbjct: 16 AIGTAVLVAGAGYALAGTQPDHSGATYYHATFGKAGQGLDKRSDVKIRGITVGGVEQVTL 75
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA----- 128
+ + I + + + A I + G + + +E K +
Sbjct: 76 RPD--GRVAVRIRIDENIKITRNAQAAIEPVSVFGPKDLTIDLGPEEGKGPYLPDGGTIT 133
Query: 129 -TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
T+ + A P+ + ++ + + S + + + + +E
Sbjct: 134 RTKDPEELADVAWPAYRLTQALDPQDIATLLHTFSEGLNGQGPALRRTIDNGTKLLEVAY 193
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
A ID + + + + ++ Q +N+
Sbjct: 194 RRRAQIQRLIDDIAALSGTLGGRGAAITALAGDFNAVSPALSDRPDKVGQLLNEAGRLSD 253
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
S+ + + + + +I L+S
Sbjct: 254 QVSSTLQRHGRDIGEIIDGGGRAVEVLYRERAEIPTLISGL 294
>gi|194288782|ref|YP_002004689.1| paraquat-inducible protein b [Cupriavidus taiwanensis LMG 19424]
gi|193222617|emb|CAQ68620.1| paraquat-inducible protein B [Cupriavidus taiwanensis LMG 19424]
Length = 558
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/389 (9%), Positives = 102/389 (26%), Gaps = 30/389 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L S V + + VG++V LD + + P TA R +G+
Sbjct: 196 LDIGSPVYYRRVLVGQVVAYQLDPNGR---DITLRVFVNKPYDKLVTADTRFWHASGVDL 252
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + A ++ + + +
Sbjct: 253 KLDAGGL----KLSTQSLVTVLLGGVAFQAPDHTTATDAAAENTQFLLAADQAEAMKEPE 308
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
P + +++ + ++ + + ++ L
Sbjct: 309 ELAPTLAVLNFDQSVRGLSPGAPVDFRGVVVGQVRSIGIEFQREKRAFRMPVVVELYPSR 368
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ V ++ + + T + + + K + D +
Sbjct: 369 MGFRERDVEDRERARKIIQGLMQRGMRAQLRTGNLLTGQLYVALDFFPKAAPVKVDLDAP 428
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ T+ + + + + ++LN + +
Sbjct: 429 IPEFPTTPGAFDQLQAQ-------VGDIVNRIDKVPFDQIGQDLRTTVASLNKTLATADK 481
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L+ ++N + A+ R T N + S D + +
Sbjct: 482 LVQQLNG--------DVAPQVLAALQDARKTLTAANGTLASDAP--------LQQDTRRM 525
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T + ER+P+ ++ G+
Sbjct: 526 LQELTRTATSLRTLTDYLERHPEALLRGK 554
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
++ SV GLS + V F G+ VG++ + ++ + +
Sbjct: 316 VLNFDQSVRGLSPGAPVDFRGVVVGQVRSIGIEFQREKRA 355
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 43/447 (9%), Positives = 123/447 (27%), Gaps = 32/447 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + I L + GP V R + +GL+ ++VR+ + +G + + L
Sbjct: 47 LIPIVAAVVGISLLVHTLASRGPEITVTFR---TAEGLTPGKTAVRYKDVDIGLVKSVRL 103
Query: 74 DQEYPNHSLAKALIRPDTPLY--PSTTATIRTQGL--AGITYIELSTLRKEKKTIFQIAT 129
++ +H +A + D + T + +G++ +E +
Sbjct: 104 ARDR-SHVVATIDLSKDAENFAVADTRFWVVRPRFAASGVSGLETLLSGAYIGVDAGKSN 162
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
E + P + S + + S I + + +A +
Sbjct: 163 ESARDFKGLEVPPVVTTDASGKQFVLRASELGSLDIGSPVYYRRVLVGQVVAYQLDPNGR 222
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
++K + + D + + + +
Sbjct: 223 DITLRVFVNKPYDKLVTADTRFWHASGVDLKLDAGGLKLSTQSLVTVLLGGVAFQAPDHT 282
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ + + D E + +E+ + L D S + S +
Sbjct: 283 TATDAAAENTQFLLAADQAEAMKEPEELAPTLAVLNFDQSVRGLSPGAPVDFRGVVVGQV 342
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS-- 367
+ + ++ + + ++ +++ + + +
Sbjct: 343 RSIGIEFQREKRAFRMPVVVELYPSRMGFRERDVEDRERARKIIQGLMQRGMRAQLRTGN 402
Query: 368 ------------------LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ D + F T ++ +G+ + + + I
Sbjct: 403 LLTGQLYVALDFFPKAAPVKVDLDAPIPEFPTTPGAFDQLQAQVGDIVNRIDKVPFDQIG 462
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L+ TV + L ++ Q +
Sbjct: 463 ---QDLRTTVASLNKTLATADKLVQQL 486
>gi|126727093|ref|ZP_01742930.1| hypothetical protein RB2150_00619 [Rhodobacterales bacterium
HTCC2150]
gi|126703521|gb|EBA02617.1| hypothetical protein RB2150_00619 [Rhodobacterales bacterium
HTCC2150]
Length = 149
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 2/133 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V++ + + E+ S++G+S + VR
Sbjct: 1 MGENTTEVLTGAAVLAAGIGFALYLGTTTGVTDRTSGTYELRASF-RSIEGVSVGTDVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + L+ E + + ++ L +T +I ++GL G ++EL
Sbjct: 60 AGVKVGSVTDVALNPETYR-ADMRFAVKDGILLSDDSTISISSEGLLGGNFVELIPGGSP 118
Query: 121 KKTIFQIATERNQ 133
E Q
Sbjct: 119 FDLEPNGEIEDTQ 131
>gi|171915776|ref|ZP_02931246.1| paraquat-inducible protein B [Verrucomicrobium spinosum DSM 4136]
Length = 553
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/408 (10%), Positives = 102/408 (25%), Gaps = 36/408 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + F G VGRI D L D +
Sbjct: 178 DNPGSLVAGSPIYFRGFEVGRIERRSFDINVRRTIL-------DVFIRE----------- 219
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y L I TPS A + +
Sbjct: 220 ---QYASLVHENTAFWNTSGIDVSAGAEGFRVRTPSLQAMMAGGASFAVPEGKSPGKQAT 276
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
P + + L
Sbjct: 277 NGTSYRLYPDEESTRQQDFNPDRKCLVFFDQSIRGLKKGAPVEFRGIPFGRVVEISLRHG 336
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + +V+ + S + + +R T + + +
Sbjct: 337 TADDKRIPVVIEVDPGILLQNESDARADRDALFAKAVREGLRARLGTGSLLTGALFVDVD 396
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
++ T + S S+ + + + +T++ + ++ +
Sbjct: 397 FIPDAPPAELTRMGEYQVLPSHSSGLVQLEEKVNAILAKINALPIEDTLQKFGTTADEVT 456
Query: 347 QKFAELMSKINN---ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+ AE + ++ + A ++ + + R + E + + +
Sbjct: 457 KTVAETRAVVDEAKKLLAAHATQNMTAEVNATLKELRSSVESL------------GPAGN 504
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
D++ + +L+ + F + E P +++GREKG+ + + +
Sbjct: 505 VQGDLRRTLDELRAALRAFKTLSDTVEEKPNSLIFGREKGADPVPRAR 552
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 37/115 (32%), Gaps = 2/115 (1%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD--QEYPNHSLAKALIRPDTP 92
P + ++ S+ GL + V F GIP GR+V + L + P
Sbjct: 295 FNPDRKCLVFFDQSIRGLKKGAPVEFRGIPFGRVVEISLRHGTADDKRIPVVIEVDPGIL 354
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
L + A L E R ++ A + + A P+ +
Sbjct: 355 LQNESDARADRDALFAKAVREGLRARLGTGSLLTGALFVDVDFIPDAPPAELTRM 409
>gi|126436739|ref|YP_001072430.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236539|gb|ABN99939.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 448
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/352 (10%), Positives = 94/352 (26%), Gaps = 14/352 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + V+++ ++ ++ + G +I + +G+ VR
Sbjct: 2 MSKRTLRL-----VLAVALVVISAVGVVTATRPAGGLNRTQVIAYFANSNGIFVGDEVRI 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG+I + + A I + L + I+L+
Sbjct: 57 LGVAVGKIDKIEPQP---KQVKITMSYDDKYKVPADAKAVILSPSLVSVRAIQLTPAYTS 113
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS-----SRHIQKIIENIEKP 175
+ A QR + + T + + +N+
Sbjct: 114 GPAMQDGAVIPEQRTAVPVEWDDFRQQLEKLSETLQPTEPGGVSTLGSFVNTAADNLRGE 173
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ +S + H D + T + + + + + + +
Sbjct: 174 GANIRETVIKLSQAFSALGDHSDDLFTTVKNLSVLVSALQSSTDLMRDLNQSLASVTGLL 233
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-SSKMKS 294
N++ + ++ V + T+ V ++ L D + +
Sbjct: 234 ANGDNEVGAALADINSVVGDVQTFVAENRESLGTTSDKLASVSTALNQSLDDIKQTLHLT 293
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
T NI + + A+ + I I + + +
Sbjct: 294 PTTFQNFVNIYQPSQGALTGALALNNFANPISFICGAIQAASRLNAEQSAKL 345
>gi|262280245|ref|ZP_06058029.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus
RUH2202]
gi|262258023|gb|EEY76757.1| toluene tolerance efflux transporter [Acinetobacter calcoaceticus
RUH2202]
Length = 227
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 37/92 (40%), Gaps = 3/92 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRS-NQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+S++ +VG+FV+ FF +S + + +V+GL + V
Sbjct: 1 MKSRSSELAVGIFVIIFGIALFFLAMKVSGLVGTNLSDSYTMKAQF-DNVNGLKPRAKVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + +
Sbjct: 60 MSGVTIGRVDSITLDPVT-RLATVTFGLDGKL 90
>gi|239945580|ref|ZP_04697517.1| putative Mce family protein [Streptomyces roseosporus NRRL 15998]
gi|239992047|ref|ZP_04712711.1| putative Mce family protein [Streptomyces roseosporus NRRL 11379]
gi|291449035|ref|ZP_06588425.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291351982|gb|EFE78886.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 411
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 7/144 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F+V + + + Y G V ++ P + GL T S+V
Sbjct: 1 MITLAVRLKTLAFLVIAVLVLGYLGVRYADLGHYVGLRSYYTVTVQFPQT-GGLYTHSNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L ++ A+ I D P + S A + G Y++L
Sbjct: 60 TYRGVSVGRVGPIELTEDG---VEAELRIEKDAPRIPDSLMAVVANLSAVGEQYVDLRPT 116
Query: 118 RKEKKTIFQIATERNQRAMITATP 141
R E + + I A P
Sbjct: 117 RTEGPFLGNGSVIDEADTTIPAPP 140
>gi|108797256|ref|YP_637453.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866341|ref|YP_936293.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126432880|ref|YP_001068571.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|108767675|gb|ABG06397.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692430|gb|ABL89503.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126232680|gb|ABN96080.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 341
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 84/281 (29%), Gaps = 11/281 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F V ++ F+ + + + G + + SVR GI VG
Sbjct: 9 VKFGVFAVVMVLFTAALVAIFGQYRAGSANEYSAV---FGDASSVKSGDSVRIAGIRVGT 65
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ G+ L + + R D L T +R L G Y+EL +
Sbjct: 66 VNGVSLQPDNT--VVVDFDARTDVVLTTGTRVAVRYLNLVGDRYLELVDGPGATQIQPAG 123
Query: 128 ATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ R + + E+ + + +Q +IE T +
Sbjct: 124 SRIPKDRTEPALDLDLLLGGLKPVIRGLNPEDVNALTHSLIQILQGQSGDIESLFARTSS 183
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+I+ ID + + D + + + + + +
Sbjct: 184 FTNSIAANGETVRQMIDHLNTVVETMSRDGDKFSGAVARLEELVTGLAQDRDPIGAAIES 243
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + ++ ++ + ++ + ++ + +D
Sbjct: 244 LDKGTASLADLMTEARPPLAGSIDQLNRVAPLLEKDKELLD 284
>gi|16762073|ref|NP_457690.1| hypothetical protein STY3490 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766606|ref|NP_462221.1| transport protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29143562|ref|NP_806904.1| hypothetical protein t3228 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62181819|ref|YP_218236.1| ABC transporter substrate-binding protein [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|161616321|ref|YP_001590286.1| hypothetical protein SPAB_04129 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167552039|ref|ZP_02345792.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|167994504|ref|ZP_02575595.1| Mce family protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168231922|ref|ZP_02656980.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|168238013|ref|ZP_02663071.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168243147|ref|ZP_02668079.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168262676|ref|ZP_02684649.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168463463|ref|ZP_02697380.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168819619|ref|ZP_02831619.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|194445427|ref|YP_002042569.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194449713|ref|YP_002047340.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194469104|ref|ZP_03075088.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194737260|ref|YP_002116261.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197248490|ref|YP_002148236.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197265224|ref|ZP_03165298.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|198242739|ref|YP_002217282.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|204931140|ref|ZP_03221934.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205354212|ref|YP_002228013.1| hypothetical protein SG3201 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858559|ref|YP_002245210.1| hypothetical protein SEN3144 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213023204|ref|ZP_03337651.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
gi|213426646|ref|ZP_03359396.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213584876|ref|ZP_03366702.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213857746|ref|ZP_03384717.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224585108|ref|YP_002638907.1| hypothetical protein SPC_3381 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238910105|ref|ZP_04653942.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|25351646|pir||AF0904 probable exported protein [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16421868|gb|AAL22180.1| putative ABC superfamily transport protein [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|16504376|emb|CAD07828.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29139197|gb|AAO70764.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62129452|gb|AAX67155.1| putative ABC superfamily (bind_prot) transport protein [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|161365685|gb|ABX69453.1| hypothetical protein SPAB_04129 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404090|gb|ACF64312.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194408017|gb|ACF68236.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194455468|gb|EDX44307.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194712762|gb|ACF91983.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195633483|gb|EDX51897.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197212193|gb|ACH49590.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197243479|gb|EDY26099.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197289082|gb|EDY28451.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197937255|gb|ACH74588.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|204319907|gb|EDZ05113.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205273993|emb|CAR38999.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205323175|gb|EDZ11014.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205327625|gb|EDZ14389.1| Mce family protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205333826|gb|EDZ20590.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205337885|gb|EDZ24649.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205343395|gb|EDZ30159.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205348529|gb|EDZ35160.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206710362|emb|CAR34720.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224469636|gb|ACN47466.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248476|emb|CBG26313.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267995510|gb|ACY90395.1| putative transport protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159860|emb|CBW19379.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312914338|dbj|BAJ38312.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|320087756|emb|CBY97520.1| Uncharacterized protein yrbD Flags: Precursor [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|321225265|gb|EFX50324.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Salmonella enterica subsp. enterica serovar Typhimurium
str. TN061786]
gi|322615315|gb|EFY12236.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618326|gb|EFY15217.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322622869|gb|EFY19713.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322631378|gb|EFY28138.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635355|gb|EFY32069.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322647074|gb|EFY43575.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322648877|gb|EFY45322.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322655069|gb|EFY51380.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322657672|gb|EFY53940.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322667451|gb|EFY63613.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674699|gb|EFY70791.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322684907|gb|EFY80905.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|322716308|gb|EFZ07879.1| putative phospholipid ABC transporter-binding protein mlaD
[Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323131671|gb|ADX19101.1| putative transport protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323195888|gb|EFZ81059.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323199005|gb|EFZ84102.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204295|gb|EFZ89304.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323207642|gb|EFZ92589.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323211305|gb|EFZ96149.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323214753|gb|EFZ99502.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221233|gb|EGA05659.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323224026|gb|EGA08319.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323233301|gb|EGA17395.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323239338|gb|EGA23388.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323242411|gb|EGA26437.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323246921|gb|EGA30887.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323254146|gb|EGA37966.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255263|gb|EGA39040.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323262726|gb|EGA46282.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323264036|gb|EGA47544.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323269422|gb|EGA52877.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|326625061|gb|EGE31406.1| putative phospholipid ABC transporter-binding protein mlaD
[Salmonella enterica subsp. enterica serovar Dublin str.
3246]
gi|326629334|gb|EGE35677.1| putative exported protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 183
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRTEPTYKVYATFDNIGGLKVRSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVEDISLDPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + + +
Sbjct: 120 DPELGTSILKDGSTIQDTKSAMVLEDM 146
>gi|315125512|ref|YP_004067515.1| ABC transporter periplasmic substrate-binding protein
[Pseudoalteromonas sp. SM9913]
gi|315014025|gb|ADT67363.1| ABC transporter periplasmic substrate-binding protein
[Pseudoalteromonas sp. SM9913]
Length = 182
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/114 (16%), Positives = 42/114 (36%), Gaps = 5/114 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ VG FV + ++ S G + + ++ L T + ++
Sbjct: 1 MNSRKLEILVGFFVALGILAFSMLALKVANSGISGSGETYTLNAKF-ENIGSLKTRAPIK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
G+ +GR+ +++ + I +++ +I T G+ G Y
Sbjct: 60 VGGVVIGRVESIYVHPQEFLPV-VNMSIDAQYLCRFSDTSSISILTSGILGEQY 112
>gi|120404935|ref|YP_954764.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957753|gb|ABM14758.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 342
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/126 (18%), Positives = 40/126 (31%), Gaps = 5/126 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F+ +F + ++ DG +V GL +D VR G+ VG I +
Sbjct: 14 VFLSVCALATFALLTVFAQFRFGDGRTY---FAEFDNVSGLKSDDLVRIAGVEVGNIEDI 70
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + + T A IR + G Y+ L + + T
Sbjct: 71 SFKADST--VRVEFSADESVVVTDGTRAAIRYDNVIGGRYLALEEGAGGLRALPAGGTIP 128
Query: 132 NQRAMI 137
R
Sbjct: 129 VTRTQP 134
>gi|46447388|ref|YP_008753.1| hypothetical protein pc1754 [Candidatus Protochlamydia amoebophila
UWE25]
gi|46401029|emb|CAF24478.1| hypothetical protein pc1754 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 409
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 62/424 (14%), Positives = 139/424 (32%), Gaps = 33/424 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +G+FV+ L F + +L + +R ++D ++ S V F
Sbjct: 1 MAASVKNILIGIFVLLALAIIVFLLLFLH--PSVGDNAKTLRVRFT-NIDKINVGSRVTF 57
Query: 61 NGIPVGRIVGLFLDQE-------YPNHSLA---KALIRPDTPLYPSTTATIRTQGLAGIT 110
G PVG +V + + + + +Y S +IRT GL G
Sbjct: 58 AGKPVGEVVSIEEIPDARIGRINHQGDVYIYQLTLKVDSSVSVYNSDEISIRTSGLLGEK 117
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
I + + + E T K+ S ++ ++E
Sbjct: 118 ----------NIEIDPQPLKSGGTLIDVENQILYASPSGSVEETLKQFDQISTQLKVVLE 167
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ TI E + +A I +I ++ S F +++ K
Sbjct: 168 DFHDTF--TILKNEKVIEGIAQTIKNIGEITQVVNQPEKLSRMLTNFVNLSERTHQSWKT 225
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ A Q Q+ E +S + + + ++++ T Q + +
Sbjct: 226 LDAAC-QNFYQLSEKANISWLSVENTLKEFNLASVNLQKMTNQTQLLVANMAQGKGTLGK 284
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + +++I + N+ S I + ++ + L+DS++
Sbjct: 285 LFVADDLYLRVKSILNKGENIFSDIKQYGILFQHNKRWQRLQAQRMKLLHKLSDSNKFAN 344
Query: 351 ELMSKINNISALKENNSLFKDAQR-------AMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+IN IS+ + S+ + F + + + + N L+ +++
Sbjct: 345 YFNDEINQISSSLSSISMVLNEAECYPYSLLNTPEFTCRFADLIKRVGEMENALKMYNEQ 404
Query: 404 GLND 407
++
Sbjct: 405 VIDQ 408
>gi|42525129|ref|NP_970509.1| ABC-type organic solvent resistance transport system
substrate-bindin protein [Bdellovibrio bacteriovorus
HD100]
gi|39577340|emb|CAE81163.1| ABC-type organic solvent resistance transport system
substrate-bindin protein [Bdellovibrio bacteriovorus
HD100]
Length = 258
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 43/148 (29%), Gaps = 10/148 (6%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T VGL + + Y++ + + ++ G+ S VR GI VG
Sbjct: 4 ETKVGLLALVSVVLIVVFAYFMGFISPFSNSKELNVMYNY--AGGIEEGSPVRVMGIKVG 61
Query: 67 RIVGLFLDQEYPN------HSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLR 118
++ + D Y + + + I G+ G ++E+S
Sbjct: 62 KVKAITFDPGYKAPSGEEVKLRLTITVDKKAWTSVRKDSKFFINLAGVIGEKFLEISPGS 121
Query: 119 KEKKTIFQIATERNQRAMITATPSGINY 146
+ R + Y
Sbjct: 122 VDSGEFSSGDYVRGEDPPRVDQLISQGY 149
>gi|33864748|ref|NP_896307.1| ABC transporter [Synechococcus sp. WH 8102]
gi|33632271|emb|CAE06727.1| possible ABC transporter [Synechococcus sp. WH 8102]
Length = 307
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 83/306 (27%), Gaps = 17/306 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG V+ + + W+ + V GL+ S V +
Sbjct: 1 MRRSVRDALVGFTVIGGIVGFAATAMWMRGI-RLGSGHWTVTASFSD-AGGLAERSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI VG + + + E +A+ I D L TAT+ + L G R
Sbjct: 59 RGILVGSVRSVRVTPE---AVVAELEIDKGDLRLALPVTATVASGSLLGGDAQVALVSRG 115
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
E + + A + S ++ + +
Sbjct: 116 ------TPLPESAPLPQAGSCETSRQLCDGAAIQGQEAPSLTTVTESLQLLLSQAKDAQL 169
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ N+ + K + T D+ +
Sbjct: 170 VPNLAKSTKQFEQTAIDASKFLTNADATSREIDALVEQLRVEIARAQPMIENLNAATANA 229
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q ++ T++++R+T E+ KID + D ++ A
Sbjct: 230 VQASVHVNNIVTALDN-----PKTLNELRQTAANAAELTAKIDSVGGDVANLTADPAFMA 284
Query: 300 FLENIA 305
L N+
Sbjct: 285 GLRNVT 290
>gi|200388220|ref|ZP_03214832.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|199605318|gb|EDZ03863.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
Length = 183
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRTEPTYKVYATFDNIGGLKVRSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVEDISLDPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + + +
Sbjct: 120 DPELGTSILKDGSTIQDTKSAMVLEDM 146
>gi|56415240|ref|YP_152315.1| hypothetical protein SPA3178 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197364170|ref|YP_002143807.1| hypothetical protein SSPA2966 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56129497|gb|AAV79003.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197095647|emb|CAR61215.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 183
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 56/147 (38%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRTEPTYKVYATFDNIGGLKVRSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVEDISLDPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + + +
Sbjct: 120 DPELGTSILKDGSTIQDTKSAMVLEDM 146
>gi|302525567|ref|ZP_07277909.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302434462|gb|EFL06278.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 413
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 98/292 (33%), Gaps = 12/292 (4%)
Query: 1 MESKNYYT-SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + FV++++ ++ + + V +++P S G+ +S V
Sbjct: 1 MNTRKTRIQLLVFFVIAVVSVTYAGGRYAGLDRIFGNRGYHVTLKLPDS-GGVFVNSEVA 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGR+ + L + + I P + + A + + G +++L R
Sbjct: 60 YRGVTVGRVGAMTLTPQG---IDVRLDIDSGGPDIPSALHAQVANRSAVGEQFVDLLPDR 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENI 172
+ + A R + ATP + + E+ + ++ +
Sbjct: 117 ESGPYLEDGAVIAQDRTSLPATPDSVLTHLDGLVASVHPESLKTVVDETYDAFAGSGPQL 176
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+K L +T + T + + + + + + F + I K
Sbjct: 177 QKLLDSTSSLTATAAQYVPDTQGLLANSRTVFATQERQAQNITAFASGLKTIAGQLKSSD 236
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ +++ + + S+ S + + T Q I+ L
Sbjct: 237 PALRKVIDEAPQLSRQISDVLATSGTDLGVLFANSLTTAQVTSMRKDAIEEL 288
>gi|296166528|ref|ZP_06848959.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898140|gb|EFG77715.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 574
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M K + +F V++ + + +I++L + V GL +++V
Sbjct: 1 MHDKLTRIQLWIFAVITTITLTVMAIFYLRLPATFGIGTYGVSADFVA-GGGLYKNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L+ A + TP+ + TAT+++ G Y
Sbjct: 60 YRGVAVGRVESVGLNPHG---VTAGMRLNSGTPIPSNVTATVKSVSAVGEQY 108
>gi|256425146|ref|YP_003125799.1| organic solvent ABC transporter perimplasmic protein [Chitinophaga
pinensis DSM 2588]
gi|256040054|gb|ACU63598.1| Mammalian cell entry related domain protein [Chitinophaga pinensis
DSM 2588]
Length = 332
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 29/325 (8%), Positives = 86/325 (26%), Gaps = 13/325 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T VG+ + L + + + V+GL ++V+
Sbjct: 1 MLKVSNETKVGVLAAISIALLILGFNLLKGKSLFSTSKKIYAVYTQ--VNGLQPSATVQV 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG+ VG + L + + L + I + ++ A I + L G +++
Sbjct: 59 NGLVVGSVSNLEIMDKNAGRILVELRITKKIDIPQNSVARI-SSDLLGTKTVQIDFGNAN 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + ++++ + +
Sbjct: 118 AYLQSGDTI----------YAAVDGSITDALKEQLNPLVKKLEGTLGSVDSVLLTVNSIF 167
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ A + T + + +L+ + +
Sbjct: 168 DPSTKGNLREAIAHLNTTMNNFTRTSASLNGMLDPQHGNVKATFDNLEALTANLKNNNDK 227
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++ ++ T+ + + + E K++ + K+
Sbjct: 228 ITAILGNAEKTTAALANGELDKTLVQLHQLSTRLNETITKLNSTDGSVGLMLNDKQVYNN 287
Query: 301 LENIADSTSNMRSSISAIREITDQR 325
L+N + + + + +
Sbjct: 288 LQNSLSNLNKLLEDLRVNPKRYVHF 312
>gi|183982889|ref|YP_001851180.1| MCE-family protein Mce3D [Mycobacterium marinum M]
gi|183176215|gb|ACC41325.1| MCE-family protein Mce3D [Mycobacterium marinum M]
Length = 427
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/352 (10%), Positives = 94/352 (26%), Gaps = 12/352 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ T V++ ++ +++ + +G+ V
Sbjct: 1 MTTRLRRTR---SVLATTLILVLVAGVIAAMRTAGDATRTLVVAYFDNSNGVFAGDDVLI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG+IV + S + A I + L I+L+
Sbjct: 58 RGVPVGKIVKIEPQP---LRSKISFWFDRKYKVPADAKAAILSPQLVTGRAIQLTPPYSG 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKP 175
T+ A QR + + + K +N+
Sbjct: 115 GPTMASGAIISQQRTAVPVEWDDLRNQLQRLTELLKPTEPGGVSTLGALINTAADNLRGQ 174
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+T I +S ++ H + + T + + + + + + + ++
Sbjct: 175 GSTIRDAIVELSQTVSTLSDHRNDIFSTVRNLSTLVSALHDSADLLEQLNHNLAAVSSLL 234
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-SSKMKS 294
N++ + ++ + V + + + L D +
Sbjct: 235 ATDPNKVGQAVEDINAVVADVQSFAAENREAVGTASDKLASISNALVASLDDIKQTLHIG 294
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
NI + + + A + + + I + +
Sbjct: 295 PTVLQNFNNIFEPANGALTGALAANDFANPISFLCGAIQSASRLGGEQAAKL 346
>gi|226361060|ref|YP_002778838.1| Mce family protein [Rhodococcus opacus B4]
gi|226239545|dbj|BAH49893.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 418
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/378 (10%), Positives = 106/378 (28%), Gaps = 21/378 (5%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + V+ L + + +R+ ++ SV G+ S VR G+
Sbjct: 13 RGGIALIAGIVIVALVIAGALWWVFTRAG-----TTKITAYFDKSV-GIYEGSDVRVLGV 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + G+ + + + A T + YI+L+ +T
Sbjct: 67 KVGSVDGVEPQGD---QVKVDMRVDRGVDIPADAKAAQVTPSVVSDRYIQLAPAYTGGET 123
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTS------------KKISDSSRHIQKIIEN 171
+ A R + I + + + ++ E
Sbjct: 124 MESGAVISRDRTATPVEVDQLYASIEELSTALGPEGANKEGALSQFVETGAANLDGNGEA 183
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + T++ + + + + FN+ ++
Sbjct: 184 LGQSINQLSDAARTLNESRGDLFDTVKNLQVFVGALAANDQQVRDFNSQLSDLSGFLAGE 243
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ +NQ+ + S + + + V D+ TQT + + + + L+
Sbjct: 244 RENLGAALNQLAIALGDVSKFVADNREILAENVDDLVPVTQTLADNRESLVNSLTLLPLA 303
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + S E+ ++ + + + + +
Sbjct: 304 ISNLANSYDAESGNLASRLAFPDLQDPAGVACKLIDLGKLVPGDPRFEQLGRQMQPLIDN 363
Query: 352 LMSKINNISALKENNSLF 369
+ + I+ + SL
Sbjct: 364 CANITSQITQSAKTPSLV 381
>gi|169631226|ref|YP_001704875.1| MCE-family protein [Mycobacterium abscessus ATCC 19977]
gi|169243193|emb|CAM64221.1| Hypothetical MCE-family protein [Mycobacterium abscessus]
Length = 509
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 45/112 (40%), Gaps = 6/112 (5%)
Query: 1 MESKNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
ME + + +F ++ + +I++L +V + S GL +++V
Sbjct: 1 ME-RLIKIQLAIFAAVTVISVALMAIFYLRVPTALGIGKHDVKAQFVAS-GGLYQNANVT 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
F G+ +GR+ + L E A + + + + A +++ G Y
Sbjct: 59 FRGVQIGRVTDVELTPEG---VTATMRLNDNVKVPGNVVAAVKSVSAIGEQY 107
>gi|328880855|emb|CCA54094.1| virulence factor mce family protein [Streptomyces venezuelae ATCC
10712]
Length = 351
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 36/106 (33%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
FV+ + ++ + V GL SVR G+ VG + +
Sbjct: 22 AFVLVTALATTVLGLSIANTG-VGSATHSYKALFTD-VTGLVKGDSVRIAGVKVGEVTDV 79
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + + +R D + S TA ++ + G Y+ L
Sbjct: 80 RVVE--RRTAQVTFTVREDRSVPRSATAAVKYLNMVGQRYVSLGRG 123
>gi|226304452|ref|YP_002764410.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183567|dbj|BAH31671.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 434
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/327 (11%), Positives = 102/327 (31%), Gaps = 21/327 (6%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + +G V+ L + + ++ ++ S GL VR G+
Sbjct: 17 RKKWVLIGAGVLVALLVAGAAYLFIPGLG-----KTKISAHFV-STTGLYEGDVVRVLGV 70
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + + + I + A I Q L +++L+ + +
Sbjct: 71 NVGKVTKIEP---RDRDTYVEMKIDSSVDVPADAKALIVAQSLVSARFVQLTPVYSGGEQ 127
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTS------------KKISDSSRHIQKIIEN 171
+ +R + I ++ + + I ++ E+
Sbjct: 128 MPNGGEIPIERTAVPVEWDEIKTELTKLSDALGPEGLDDQGSLGRFIDTVGTNLDGNGES 187
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
I L A + T+S + S I + S++ F+ +TS+
Sbjct: 188 IRSTLRELSATMHTLSEGRTDLFSTIRNLQAFVTALSSSNEQIVQFSGHLASVTSVLASS 247
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + + +S+ + +V + + TQ + +I+ +L +
Sbjct: 248 SDELGTALSDLDLAVGDVQRFVKDNSEGLSESVARLADATQVLTDKRPEIEQVLHSGPTS 307
Query: 292 MKSKETSAFLENIADSTSNMRSSISAI 318
+ + + + + S+
Sbjct: 308 LANFYQIYKPAQGSMTGAIALSNFKNP 334
>gi|118464414|ref|YP_883679.1| virulence factor Mce [Mycobacterium avium 104]
gi|118165701|gb|ABK66598.1| virulence factor mce family protein [Mycobacterium avium 104]
Length = 499
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/307 (11%), Positives = 73/307 (23%), Gaps = 8/307 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ V++ L F I ++ Y ++ L V+ G+ VG I +
Sbjct: 19 VLVIAALAAVFVFIAAVAGVQLYRKLTTTTVVAYFSETLALYPGDRVQIMGVRVGSIDKI 78
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + + TA+I L I+LS + A
Sbjct: 79 EPAGD---KMRVTLHYNNKYRVPANATASILNPSLVASRTIQLSPPYTGGPVLRDGAVIP 135
Query: 132 NQR-----AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+R S + I+ +N+ + ++
Sbjct: 136 IERTRVPVEWDQLRDSINAILRQLGPTPQQPAGPFGDIIESAADNLSGKGKQVNETLNSL 195
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S L + T+ + + + Q +Q+ + I
Sbjct: 196 SQALTALNEGRGDFVAITKSLARFVTALYQHKQQFVALNNNLAQFTDWFTQSDHQVSDTI 255
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ V + + +V I + F N +
Sbjct: 256 AHLDQVLDAARKFVNDNGSALTHDVGNLADVTTTILQPEPRDGLETALHVLPTFAGNFNN 315
Query: 307 STSNMRS 313
S
Sbjct: 316 LYQPAHS 322
>gi|206602087|gb|EDZ38569.1| Conserved protein of unknown function [Leptospirillum sp. Group II
'5-way CG']
Length = 325
Score = 79.2 bits (192), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/309 (13%), Positives = 85/309 (27%), Gaps = 15/309 (4%)
Query: 1 MESKNY----YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+ + VGL V +I + + I +V GL+ +
Sbjct: 3 MKRSSNLKLSEIRVGLIVGISFLLGALAIVTYGKVQNLFSKQVPLTILF-DNVRGLTVGA 61
Query: 57 SVRFNGIPVGRIVGL---FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
VR +G+ G + + + + L T+A IRTQGL GI ++E
Sbjct: 62 PVRISGMNSGFVKSIHFVRFHNQQLIQVRIRLSASRLPDLSEETSAVIRTQGLMGIKFLE 121
Query: 114 LSTLRKEKKTIFQIATERN-------QRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
L K I + +S + +
Sbjct: 122 LIPGDLSKGPINPALPIYGKATLTMETVLGKGSDLVKNLKNLSISMQELMEQVREGHGTV 181
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ I +V + + + + + ++ S
Sbjct: 182 GRFMTKPELYDNLDQATREIRSVAEDVNHGTGPVSSLIHSREMTRRLNDILRHLDGVMAS 241
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
LD ++ + + +S + + + + +GQK+D L
Sbjct: 242 LDDPQGSLGMLARDPSTAGDLRTSIHAMAGILKDLKAGKGTAGQILVDPAMGQKMDATLD 301
Query: 287 DFSSKMKSK 295
++ +
Sbjct: 302 RVNALLDDM 310
>gi|126436737|ref|YP_001072428.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236537|gb|ABN99937.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 487
Score = 78.8 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/357 (10%), Positives = 102/357 (28%), Gaps = 12/357 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ + +G+F+ L + ++ N G + GL +V +
Sbjct: 4 TRRIWIQLGVFLAVALTAFSIMAFNYMKLPNLLFGIGRYSVTLQLPEAGGLYERGNVTYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VG++ + L + A+ ++ D + + A + +Q G Y+ L
Sbjct: 64 GTEVGQVKSVRLTESGD--VEAELSLQSDVKIPANLIAEVHSQSAVGEQYVALLPQGDGG 121
Query: 122 KTIFQIATERNQRAMITA---------TPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ +R + N + + + + I
Sbjct: 122 PVLKNGDVISQERTTVPPDINSLLDATNRGLEAIPGDNLKTAVDEAYTAVGGLGPEINRF 181
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
K T + L N + ++ ++ T T S + + +
Sbjct: 182 VKGSTALAIDARKNLDDLTNVVDNVAPILDTQTDTSDSIQAWASHLAGVTKQLQSNDAAV 241
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
L + + + + V+ + + T+++ +++ LL +S M
Sbjct: 242 QGILHNGPGAADEARALFDRLQPTLPIVLANLVSIEPVLVTYRDNLEQLLVLLPQATSIM 301
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
++ + + + +++ + + ++
Sbjct: 302 QAIGVPNRHTKMDFEGAFLAFNLNVNIPPPCTTGFLPVQQMRPAAELDSPERPAEDL 358
>gi|145222691|ref|YP_001133369.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215177|gb|ABP44581.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 453
Score = 78.8 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 90/292 (30%), Gaps = 7/292 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G V I + +D P E GL+TD++V+ +G V
Sbjct: 8 NQLVIGAVGVGITAAIVLGATNYDKIPLFD-PGREYTAHFAE-AGGLTTDAAVQVSGFKV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + LD L + L T A I+T+GL G +E+ + ++
Sbjct: 66 GQVKSIELDGP---QVLVTFTVDKGIRLGDRTEAAIKTKGLLGTKILEVIARGEGQQDGT 122
Query: 126 QIATERNQRAMITATPSGINYFISNAENT--SKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ ++ IS + S+ + S ++ +
Sbjct: 123 IPIDRTTSPYQLPDALGELSATISGLDTDQLSESLRVLSATFADTPPQLKIAVEGVARFS 182
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+T++ A + T V S+ + T+ + + + A Q I
Sbjct: 183 DTLNARDAQLRGLLANANKATTVLAERSEQVVGLVSNTNALLAELQNQSAAVDQISGNIS 242
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ D + + + +++ LS + S
Sbjct: 243 ALSAQLQGFIGENRDTMKPALDKLNGVLTILDNRKERLQKSLSLLNDYSMSL 294
>gi|41410185|ref|NP_963021.1| hypothetical protein MAP4087 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41399019|gb|AAS06637.1| hypothetical protein MAP_4087 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 499
Score = 78.8 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/307 (11%), Positives = 73/307 (23%), Gaps = 8/307 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ V++ L F I ++ Y ++ L V+ G+ VG I +
Sbjct: 19 VLVIAALAAVFVFIAAVAGVQLYRKLTTTTVVAYFSETLALYPGDRVQIMGVRVGSIDKI 78
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + + TA+I L I+LS + A
Sbjct: 79 EPAGD---KMRVTLHYNNKYRVPANATASILNPSLVASRTIQLSPPYTGGPVLRDGAVIP 135
Query: 132 NQR-----AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+R S + + I+ +N+ + ++
Sbjct: 136 IERTRVPVEWDQLRDSINAILRQLGPTPQQPVGPFGDIIESAADNLSGKGKQVNETLNSL 195
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S L + T+ + + Q +Q+ + I
Sbjct: 196 SQALTALNEGRGDFVAITKSLARFVTALYQHKQQFVALNDNLAQFTDWFTQSDHQVSDTI 255
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ V + + +V I + F N +
Sbjct: 256 AHLDQVLDAARKFVNDNGSALTHDVGNLADVTTTILQPEPRDGLETALHVLPTFAGNFNN 315
Query: 307 STSNMRS 313
S
Sbjct: 316 LYQPAHS 322
>gi|313674214|ref|YP_004052210.1| mammalian cell entry related domain protein [Marivirga tractuosa
DSM 4126]
gi|312940912|gb|ADR20102.1| Mammalian cell entry related domain protein [Marivirga tractuosa
DSM 4126]
Length = 311
Score = 78.8 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/292 (14%), Positives = 97/292 (33%), Gaps = 5/292 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
V + +S + +F +L + ++ + V+GL+ + V +G+
Sbjct: 4 AKEIKVAVLAISSIVIFYFGFNYLKGIDFFNPTNEYYAVY--DHVNGLTASNPVLLSGLS 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT- 123
VGR+ + + QE NH +R D L + A + T L T + +
Sbjct: 62 VGRVSRIEILQERENHLKVYFEVREDISLGEESVAMLATDILGSQTIVIKRNMVTNPLPE 121
Query: 124 --IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ E + + I + + + I + + ++ I+NI + T
Sbjct: 122 GSEIKGDIEPSLTSQIQEQAYPVLKTLDSVGQHLNSILANIDNNEEAIKNIMLNVEVTTQ 181
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
N+ IS A + ID + + T+ I ++ +
Sbjct: 182 NLAKISEKQATINAVIDDFKKISATLADEKNGLKALLKKTNGIADSVNALELAKVVNRLD 241
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
++ ++ + ++ + + + +D LL D + K
Sbjct: 242 TTLININNTVAAMQDGEGTVDKLLNDDSLYTNLNQTLVDLDALLIDMKDQPK 293
>gi|120405099|ref|YP_954928.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957917|gb|ABM14922.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 561
Score = 78.8 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/323 (9%), Positives = 86/323 (26%), Gaps = 17/323 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F ++ + ++ ++ V + +P S GL S+V
Sbjct: 1 MLTRFVRNQLIIFTIASIVGVAVMLFAYMQVPTLLGVGRLVVTLELPES-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VG++ G+ L + + A + + A + + G Y++L
Sbjct: 60 YRGVQVGKVTGVSLTENG---AEATLSLETSPKIPADLQAEVLSVSAVGEQYVDLRPNTD 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR--HIQKIIENIEKPLT 177
E + A P ++S +I + +++
Sbjct: 117 EGPYLEDGARI----------PVANTTVPQQVGPMLDQLSALVGSLPKDRIPDLLDETFK 166
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
++L + + + + + D +
Sbjct: 167 AFNGAGPDFGSMLDSAATLTNDVNGVSDQMRSLIDDSGPLIDSQAETADAIRTWAQSLNG 226
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
Q+++N + + + T + + + + + E
Sbjct: 227 ISAQVVQNDPQVRALLQQGPAFAQEVSALLNQVKPTLPILLANLSTVGQTLLTYNPAIEQ 286
Query: 298 SAFLENIADSTSNMRSSISAIRE 320
L +
Sbjct: 287 LLVLFPGIIAAQQSFGLPQNSPT 309
>gi|330958336|gb|EGH58596.1| PqiB family protein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 559
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/415 (7%), Positives = 87/415 (20%), Gaps = 35/415 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPL 93
G + I + L S + + I VG++V L ++ D +
Sbjct: 161 FGEKGKRFILHTDDLGSLDIGSPIYYRRIQVGQVVAYDLSKDGRGVDVQIFINAPNDQYI 220
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T + + + + +I +
Sbjct: 221 TTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDAKLADENAEFKI-- 278
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ ++ + V
Sbjct: 279 ----------------------FDDQTTAMAPPDGEPRYIRMRFNQSLRGLTVNAAVDFL 316
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ + D K I ++ + +K +
Sbjct: 317 GVNIGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGAAESKLKELGGSGDEEEQSARVLGA 376
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
F G + + + + + + + +
Sbjct: 377 FVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQA 436
Query: 334 TIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+E +++ + + +S++ +S+ + + T N
Sbjct: 437 FVEKLSNLPIDQLAGNLNGTLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE 495
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 496 --------DSPARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
>gi|315442590|ref|YP_004075469.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260893|gb|ADT97634.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 453
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 78/293 (26%), Gaps = 16/293 (5%)
Query: 3 SKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+++ + V + V+ + + W SR+ Q + S GL VR
Sbjct: 2 TRSRWLRPVLICVLVAVLAIGAYLVWPSRTGQK-------VTAYFTSAVGLYPGDDVRVV 54
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+PVG I + I D L A + + L +I+L+
Sbjct: 55 GVPVGTIDAIDPRAND---VKITMTIDSDVKLPAEAEALVISPNLVSARFIQLTPAYTGG 111
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKPL 176
+ A R + + ++ DS R + + +
Sbjct: 112 AVLADGAEIGLDRTAVPVEWDEVKEQLTQLSTQLGPNEDSVRGPLTDVVNQAADTFDGNG 171
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + + +S + T + D+ + N ++ + +
Sbjct: 172 DTFRSAVRELSQTAGRLGDSRADLFGTIRNLQILVDALSRSNEQIVQFSNHVASVSQVLA 231
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + + + + + + D
Sbjct: 232 DATTDLDITLGTLNQALTDVRGFLGESNEALIGQVNRLTDFTNLLTEHSDDIE 284
>gi|34540787|ref|NP_905266.1| hypothetical protein PG1049 [Porphyromonas gingivalis W83]
gi|188995168|ref|YP_001929420.1| hypothetical protein PGN_1304 [Porphyromonas gingivalis ATCC 33277]
gi|34397101|gb|AAQ66165.1| conserved hypothetical protein [Porphyromonas gingivalis W83]
gi|188594848|dbj|BAG33823.1| conserved hypothetical protein [Porphyromonas gingivalis ATCC
33277]
Length = 292
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 76/286 (26%), Gaps = 8/286 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T +G + LF +F + +L N + P V ++ S V NG VG
Sbjct: 7 TKIGALTLIALFLLYFGLNYLKGFNVFKRANVYY-AAFPE-VKNVNIASPVLVNGYKVGV 64
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L D + + + + + + I L+G + +
Sbjct: 65 VKSLSFDYKNGRSIVVGIDLESEYRMPKGSHLAIHQTALSGAEL-RIIQGDPRDGYLNPG 123
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
T R++ + + S K S + + +A
Sbjct: 124 DTIRSETPDDIMSVTSNKIVPSVVNMMPKVDSVIVGLANMVNNPNLAVMMENMAATAQRL 183
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
L ++ + + + N +L + + A +
Sbjct: 184 NRLTASLDKSIGTQLPAVMANTRTITDNVAMLSEELKQLKLEALMAELQATSENLRSFSD 243
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
N+ + + + + D LL D + K
Sbjct: 244 QIRNSNGSLGMLL-----NDKSLYMRLDSMASSADALLRDLKANPK 284
>gi|298486959|ref|ZP_07005012.1| Paraquat-inducible protein B [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298158521|gb|EFH99588.1| Paraquat-inducible protein B [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 561
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/418 (10%), Positives = 109/418 (26%), Gaps = 35/418 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S V + I VG++V L ++ + D
Sbjct: 169 FGTKGTRFTLH-AEDMGSLDVGSPVYYRRIQVGQVVACHLSEDGKGVDAEIFINAPNDRF 227
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + L + T+ + ++ P +
Sbjct: 228 VTTDTRFWNASGIGLTVDADGLKIKTESVSTLLAGGVAFVEPGYGSSAPRAAEHARFKLF 287
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+K I + + + + + N I + + S
Sbjct: 288 EDQQKALSPPDGEPGYIRMMFRQSLRGLEVNSPVEFMGINLGRVISVDLDYDAASKSFSS 347
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
L + +K+++ + ++ + I +++ + + +
Sbjct: 348 IVGAVIYPDRLGQANEKILETLGTPDDSRTAQLIADFVKQGLRAQPRSASLLTG------ 401
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
L + + + + ++E + +S +
Sbjct: 402 ----------QLYISLGFFANAAPVQFDVNARPLIIPTVPGELEKMQEQVQLIVEKVSKL 451
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
++ I NLN S + + N + + + R T E +
Sbjct: 452 P-VQEIAGNLNGSLDEAHKTFKLFNA--------DVVPELHTVLGQSRSTMEMAGAALAE 502
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ + ++Q T + RNP+ ++ GR + V P
Sbjct: 503 --------DSPVRQQVSRTMDEVQRTARSVRVLTDYISRNPEALIRGRTRQDVPSVYP 552
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ DG + + S+ GL +S V F GI +GR++ + LD +
Sbjct: 294 LSPPDGEPGYIRMMFRQSLRGLEVNSPVEFMGINLGRVISVDLDYD 339
>gi|313896697|ref|ZP_07830245.1| virulence factor Mce family protein [Selenomonas sp. oral taxon 137
str. F0430]
gi|312974614|gb|EFR40081.1| virulence factor Mce family protein [Selenomonas sp. oral taxon 137
str. F0430]
Length = 426
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/328 (10%), Positives = 97/328 (29%), Gaps = 20/328 (6%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG F + + + G + + +V GL+ ++ V +G+PVG
Sbjct: 4 EAKVGAFTLVGAALLVAVVIFFGGLRLGGGHEYTLYVGFGRAV-GLNPEAQVLLSGVPVG 62
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D + D + ++ TI G+ G ++ ++
Sbjct: 63 HVEKVGSDGTG---VTVAISVSDDVKIPRGSSVTIAQPGIMGDKFVIITPSANTDYYAAG 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + +N I E+ I++ +T
Sbjct: 120 DYLYGADEMGMDSMFTELNKMIIQVEDMLTGINNIVGE----------------PGFQTS 163
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
L N+ H+ + T ++N N + + +
Sbjct: 164 MVQLVVNMEHMTAHLDGLTATLEQMAAENRGNLSGTIANMNAMSANLAQSTASVERIMTN 223
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ +++ + T+ ++ E + + + I+ + D ++ ++ + D
Sbjct: 224 LETVGADPATAENLRRTLANITEASGRIARIAEGIESVTGDVKTQEDARALIHNARTMTD 283
Query: 307 STSNMRSSISAIREITDQRQKIISTINT 334
+ + + +I+ +
Sbjct: 284 KANGLMGRLGSIKVTPKVDAMYSGKADD 311
>gi|28199533|ref|NP_779847.1| toluene tolerance protein [Xylella fastidiosa Temecula1]
gi|182682268|ref|YP_001830428.1| hypothetical protein XfasM23_1750 [Xylella fastidiosa M23]
gi|28057648|gb|AAO29496.1| toluene tolerance protein [Xylella fastidiosa Temecula1]
gi|182632378|gb|ACB93154.1| Mammalian cell entry related domain protein [Xylella fastidiosa
M23]
gi|307578544|gb|ADN62513.1| hypothetical protein XFLM_02570 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 178
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 40/119 (33%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSN-QYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M +VG F++ L + + + L + VR
Sbjct: 1 MRGPRLEFAVGTFLLLTLASLMVLAVASTNQRWSMGSNQYTLTAHFTQ-IGQLRKQAPVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+G+ +G++ + LD + + L T+A I T GL G +YI L
Sbjct: 60 ISGVNIGQVSNITLDPKTFESV-VTLSLDKQYKDLPADTSANILTSGLLGESYINLLPG 117
>gi|323344468|ref|ZP_08084693.1| hypothetical protein HMPREF0663_11229 [Prevotella oralis ATCC
33269]
gi|323094595|gb|EFZ37171.1| hypothetical protein HMPREF0663_11229 [Prevotella oralis ATCC
33269]
Length = 299
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 86/283 (30%), Gaps = 6/283 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ + + + F+ + +L + I + GLS+ S + +G VG
Sbjct: 6 EIKIAVVAIVGIIVLFYGMNFLKGLTLFSEDNIYYIA--FKDISGLSSSSPIYADGYQVG 63
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ G+ D + + + + ++A I + L + L ++
Sbjct: 64 VVKGIEYDYSHKKDTRVIIGVDKGMRIPKGSSAEIVSDMLGNVKVNLLLANNPRERVNPG 123
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
N S + + + E K+ + ++ + +
Sbjct: 124 ETINGNINNGALGKLSSM---VPSIEKMLPKLDSIMSSLNMLLADPAIAQSLHNVQTVAS 180
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ +I V + + L T+L + A +++VN + N+
Sbjct: 181 NLTTTTRQLNILTANLNHNVPVMMRKANGILDNTDRLTTNLAAIDVAGTMEQVNHTIANV 240
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + + ++D V + D L+ +
Sbjct: 241 KELTARLNSNQGSLGLLMND-ASLYNNMNSVMRNADSLMVNLR 282
>gi|254776982|ref|ZP_05218498.1| hypothetical protein MaviaA2_20256 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 343
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 80/293 (27%), Gaps = 9/293 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +F + F+ I + GL VR
Sbjct: 1 MRITGTAVKLVVFWSVLAMFTVMIIVVFGQVR--FDRTTGYSAVFTD-AGGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ + L + + L + + L TTA+IR L G Y+EL
Sbjct: 58 SGVEVGKVAAVTLS-DKDSRVLVEFNVDRSLALDQGTTASIRYLNLIGDRYLELKRGTSG 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + P+ + + D ++ I
Sbjct: 117 HRL-----PPGGRIPVEHTQPALDLDALIGGFRPLFQALDPNKVDSIAQSIITVFQGQGA 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + A + D+ +V + + T ++ + N
Sbjct: 172 TITDILDQTAALTAALADRDKAIGEVINNLNTVLATTVKHEKEFDRTVDKLELLITGLKN 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ +++ ++ D T + L++D +
Sbjct: 232 RADPLAAAAAHISDAAATVAGLLGEDRPSLHGTLGHLEGIQQALINDLPTVDN 284
>gi|237730113|ref|ZP_04560594.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226908719|gb|EEH94637.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 185
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLF++ L + F + I ++ GL S VR
Sbjct: 1 MQTKKNEIWVGLFLLVALLAALFVCLKAANVTSMRTEPTYTIYATFDNIGGLRERSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVSDISLDPKTY-LPRVTLEIESRFNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + +
Sbjct: 120 DPELGTSILKDGGTIQDTKSAMVLEDM 146
>gi|108798496|ref|YP_638693.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867596|ref|YP_937548.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108768915|gb|ABG07637.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693685|gb|ABL90758.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 438
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 34/105 (32%), Gaps = 5/105 (4%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL +++ + + + GL + V+ G V
Sbjct: 8 NPFVIGLAGITVTAGIAVIALQYDKL-PFSTSDNDYSAYFAE-AGGLQAGAPVQVAGFRV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G++ + LD L + + L T A IRT+ L G
Sbjct: 66 GQVSAVELDG---TRVLVDFDVDENVHLGELTEAHIRTKSLLGSK 107
>gi|222055774|ref|YP_002538136.1| Mammalian cell entry related domain protein [Geobacter sp. FRC-32]
gi|221565063|gb|ACM21035.1| Mammalian cell entry related domain protein [Geobacter sp. FRC-32]
Length = 324
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/306 (10%), Positives = 90/306 (29%), Gaps = 10/306 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GLF + + + ++ P ++ G G + V+ +G +GRI
Sbjct: 15 KIGLFAAIAIVGALAVVLFIGADKDLLTPKYKLKFT-TGKGTGFAKGMPVKLSGFRIGRI 73
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ L+++ + + + ++A + +GL G + IE++ + +
Sbjct: 74 KSINLNEQAMVDIEIEVNKKYQKWIKSDSSARLVKEGLVGDSIIEVTAGSAKAMVLKNGD 133
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
T + AE + + I I + +
Sbjct: 134 TIN-----FEKSKGLEEVANDIAEEVKPVLIEVKEIISYINDPNGDIKQSLGNIKLLTQQ 188
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ D ++ + + S T+ S + + + +++
Sbjct: 189 LQDTREKVDDLLVSSRDNVSSLTKSGVDVLNNTNAKVSALGPTLEKVDRSMANLEKSLPP 248
Query: 249 SSNNFVKSSDQVINT----VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
S D + T + ++ K + ++ + + + + +N
Sbjct: 249 LLQKVDASMDHLEKTTLQLQKTSEKAMPRVPKLINKAEDVMEGADTVLNAVKDMWPFKNH 308
Query: 305 ADSTSN 310
+
Sbjct: 309 VPAADQ 314
>gi|145223098|ref|YP_001133776.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215584|gb|ABP44988.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 503
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 82/298 (27%), Gaps = 11/298 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ + + G V+ + +++ + Q + P + VR
Sbjct: 2 MATRKRWVA-GTAVLLAILLVAGAVFLV---RQVFFGPTTITAYFPT-ATAIYPGDEVRV 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY---IELSTL 117
+G+ VG I + + + + + A I Q L Y
Sbjct: 57 SGVEVGTIDKIEPEGTQT---KMTLKVDRGVQVPANAKAVIVAQNLVAARYVQLTPAYRD 113
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + A+ + +E + S I + +++ +
Sbjct: 114 GDGATMADGGVIPKERTAIPVEWDEVKTQLMRLSEELGPQAGASGTSISRFVDSAANAME 173
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ L+ + + T + L + A
Sbjct: 174 GNGDKLRETLRQLSGAARIFAEGSGNIVDIIKNLQIFVTALRDSKDQIVLFQNRLATLTS 233
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
VN ++ + + + +V V R+ T ++ +L+D +++
Sbjct: 234 VVNDSRSDLDAALTDLSFAIGEVQRFVVGSRDATVEQIRSLGQVTQVLADNRLALENV 291
>gi|54027076|ref|YP_121318.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018584|dbj|BAD59954.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 413
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/311 (9%), Positives = 87/311 (27%), Gaps = 7/311 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ + +FVV + F R + G + GL + V + G
Sbjct: 2 SRLVRVQLVIFVVLAVVGVLFVGGKYIRVDHMLGFGQYRVEVTAQQTGGLYKGAEVTYRG 61
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEK 121
+PVGR+ L L + I P + S A + + G Y++L
Sbjct: 62 VPVGRVGDLALTDDG---VRMILDIDNGAPKIPASAKAVVANRSAIGEQYLDLQPDSDGA 118
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + + + + + ++ + + ++ + ++
Sbjct: 119 PYLREGSVIDGATTPVAVEQLVASVDEFT---RTVDLAALNTTVTELGKALDGKGEDLQV 175
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ +++ A + + + + + ++ + +
Sbjct: 176 FLRSLNEFTATFHDTLPQTIQLIRDGRLALATQAEQGEAIRRFSDGLDRLTLQLKASDPA 235
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ I ++ + + + + E + + ++I ++ +
Sbjct: 236 VRRLIGTGTDAGAQLDALLAESGGALTEDLTHLRTLLKEISPKFYALRPLLQMLPQLSLG 295
Query: 302 ENIADSTSNMR 312
+
Sbjct: 296 ASATAPGDGTS 306
>gi|84686585|ref|ZP_01014478.1| possible ABC transporter, substrate-binding protein [Maritimibacter
alkaliphilus HTCC2654]
gi|84665498|gb|EAQ11975.1| possible ABC transporter, substrate-binding protein
[Rhodobacterales bacterium HTCC2654]
Length = 149
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/110 (19%), Positives = 44/110 (40%), Gaps = 5/110 (4%)
Query: 16 SILFFSFFSIYWLSRSNQYDGP---MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
+L + + + + + G + + S G++ S VR G+ VGR+ L
Sbjct: 15 IVLALAIGFLIYAGGAIGWFGAGDATQNYRVSLV-SAKGINVGSDVRVAGVKVGRVSWLA 73
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
L+ E + + + + P + A + ++GL G Y+E+
Sbjct: 74 LNPETFS-AETELTVDPKFAFPEDSLAVVSSEGLLGGNYVEIIPGNSAFP 122
>gi|320530068|ref|ZP_08031138.1| virulence factor Mce family protein [Selenomonas artemidis F0399]
gi|320137501|gb|EFW29413.1| virulence factor Mce family protein [Selenomonas artemidis F0399]
Length = 426
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/328 (10%), Positives = 97/328 (29%), Gaps = 20/328 (6%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG F + + + G + + +V GL+ ++ V +G+PVG
Sbjct: 4 EAKVGAFTLVGAALLVAVVIFFGGLRLGGGHEYTLYVGFGRAV-GLNPEAQVLLSGVPVG 62
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D + D + ++ TI G+ G ++ ++
Sbjct: 63 HVEKVGSDGTG---VTVAISVSDDVKIPRGSSVTIAQPGIMGDKFVIITPSANTDYYAAG 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + +N I E+ I++ +T
Sbjct: 120 DYLYGADEMGMDSMFTELNKMIIQVEDMLTGINNIVG----------------APGFQTS 163
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
L N+ H+ + T ++N N + + +
Sbjct: 164 IVQLVVNMEHMTAHLDGLTATLEQMAAENRGNLSGTIANMNAMSANLAQSTASVERIMTN 223
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ +++ + T+ ++ E + + + I+ + D ++ ++ + D
Sbjct: 224 LETVGADPATAENLRRTLANITEASGRIARIAEGIESVTGDVKTQEDARALIHNARTMTD 283
Query: 307 STSNMRSSISAIREITDQRQKIISTINT 334
+ + + +I+ +
Sbjct: 284 KANGLMGRLGSIKVTPKVDAMYSGKADD 311
>gi|124024210|ref|YP_001018517.1| ABC transporter [Prochlorococcus marinus str. MIT 9303]
gi|123964496|gb|ABM79252.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9303]
Length = 291
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG +V + ++ WL + + + + P GL+ S V +
Sbjct: 3 MRRSVRDAIVGFSIVGGVVAFAGTLLWLRGV-RLGAKVWSIKVNFPD-ATGLAERSPVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGI 109
GI VG +V + + A I D L A + + L G
Sbjct: 61 RGILVGTVVKIDV---TSQAVRATLEINKGDLRLSTPVVAKVASSSLLGG 107
>gi|58039575|ref|YP_191539.1| ABC transporter substrate binding protein [Gluconobacter oxydans
621H]
gi|58001989|gb|AAW60883.1| ABC transporter substrate binding protein [Gluconobacter oxydans
621H]
Length = 174
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/111 (25%), Positives = 42/111 (37%), Gaps = 4/111 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
G V++ L + +Q D V +DGL+ S VR GI VG
Sbjct: 12 ELLAGFAVLACLAGLLVAAMV--GHHQSDDGGYPVHASFSQ-IDGLTVGSDVRLAGITVG 68
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G +D + + + PD L + A + + L G YI LS
Sbjct: 69 HVTGAVVDPKSF-QAQVTFTLAPDVKLPTDSAAIVTSDSLLGGKYIALSPG 118
>gi|253999678|ref|YP_003051741.1| Mammalian cell entry related domain-containing protein
[Methylovorus sp. SIP3-4]
gi|253986357|gb|ACT51214.1| Mammalian cell entry related domain protein [Methylovorus sp.
SIP3-4]
Length = 566
Score = 78.8 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/412 (10%), Positives = 114/412 (27%), Gaps = 34/412 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQ 104
+ L S V + I VGR+ L + D + T +
Sbjct: 171 SEDLGSLDIGSPVYYRRIQVGRVASYQLGETGQDIKLQIFIDAPYDRYVTTDTRFWNASG 230
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ L + TI A+P+ + + + ++
Sbjct: 231 VDVSLGADGLKLKTQSVATIVAGGVAFASPMGSQASPADKDTEFTLTADQDTAMAPPDGQ 290
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
Q I ++ L + + + +++ T +
Sbjct: 291 AQYIQLKFDQSLRGLSVGAPVQFSGVD-----LGRVVSINLDYDPVKHRFPTVVGVLVYP 345
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ ++++ + + + + + + + + + +
Sbjct: 346 ERMGRVLEKLPKLEGDNDRQAALFMHSMVKQGLRAQARLGNILTGQLYIAMDFVPNAPKV 405
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
D +++ S T + + +++I +L+
Sbjct: 406 ELDVNARPISMPTVNGSFD--------------RMQEQIANIVTKIEKMPLDSIAKHLDA 451
Query: 345 SSQKFAELMSKINN------ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
S + ++++N L++ +DA + M R T ++ + Q
Sbjct: 452 SLVNLDKTLTQVNTHVLPETTQTLQQTRQTMQDAGQTMQQARQTLSGVDNVLADDAPLSQ 511
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
N Q ++++Q T + + R+P+ ++ GR KP
Sbjct: 512 NLGQ--------TLQEVQRTSRSLRELTDLLGRHPESLLRGRPADPALKSKP 555
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/259 (13%), Positives = 75/259 (28%), Gaps = 14/259 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DG + ++ S+ GLS + V+F+G+ +GR+V + LD + ++ P
Sbjct: 288 DGQAQYIQLKFDQSLRGLSVGAPVQFSGVDLGRVVSINLDYD---------PVKHRFPTV 338
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
G +L + +F + + I +
Sbjct: 339 VGVLVYPERMGRVLEKLPKLEGDNDRQAALFMHSMVKQGLRAQ-----ARLGNILTGQLY 393
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ ++ N T+ NI + M + H S
Sbjct: 394 IAMDFVPNAPKVELDVNARPISMPTVNGSFDRMQEQIANIVTKIEKMPLDSIAKHLDASL 453
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + + LQ+ Q +++ + ++ V N + D +Q
Sbjct: 454 VNLDKTLTQVNTHVLPETTQTLQQTRQTMQDAGQTMQQARQTLSGVDNVLADDAPLSQNL 513
Query: 275 QEVGQKIDHLLSDFSSKMK 293
+ Q++
Sbjct: 514 GQTLQEVQRTSRSLRELTD 532
Score = 43.8 bits (100), Expect = 0.058, Method: Composition-based stats.
Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 10/96 (10%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVG 66
+ V + + S WLS E+ I + GL + V++ + VG
Sbjct: 26 IWIVPIVAAAIGISMLVHAWLS-------EGPEITILF-RTATGLEAGKTPVKYKDVTVG 77
Query: 67 RIVGLFLDQEYP-NHSLAKALIRPDTPLYPSTTATI 101
+ + L ++ + + + +
Sbjct: 78 AVTAITLSEDGSHVKVKVALMQSAKSLTSKDSRFWV 113
>gi|283852494|ref|ZP_06369762.1| Mammalian cell entry related domain protein [Desulfovibrio sp.
FW1012B]
gi|283572102|gb|EFC20094.1| Mammalian cell entry related domain protein [Desulfovibrio sp.
FW1012B]
Length = 304
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/267 (12%), Positives = 80/267 (29%), Gaps = 4/267 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
+ + + IR SV LS +V++ G+ +GR+ + LD E P+ +
Sbjct: 30 MIVLGGHWFWVKYDPYDIRFT-SVKDLSPGRTVKYAGLDIGRVKSIDLDPEDPHFISVRI 88
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+R D PL+ T A I +GL G Y+ L + + A
Sbjct: 89 DVRKDFPLFEGTVARIGQKGLVGDYYVLLELRGQPGARLQPGAMLPA--VNTMDMQELAA 146
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
++ KI + + +I ++ ++ + +
Sbjct: 147 KAGDLLDDIRPKIKEIADNIARLFTEENTEALRRALEGTPQLVEDLRRAANDFRT-NWAT 205
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
++ + ++ + I ++ + + +
Sbjct: 206 LSAKGGKAADSLDQSLRRIDKAVGSVEKELNKTLVTYRNQGEHVGALIKDVRQGFNYDQE 265
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKM 292
++ + + + L+S +
Sbjct: 266 NLEVILKNLNRTSRDLKELMSRLRERP 292
>gi|108801575|ref|YP_641772.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119870729|ref|YP_940681.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771994|gb|ABG10716.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119696818|gb|ABL93891.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 584
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F V + +++L +V + GL +++V
Sbjct: 1 MLTRLTKLQLSIFAVVTVLTVGAISLFYLHLPAAVGIGAYDVTAKFTA-GGGLYENANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ VGR+ + L + +A+ + TP+ + TAT+++ G Y
Sbjct: 60 YRGVTVGRVEKVGLADDG---VVAQMRLNSGTPVPENVTATVKSVSAIGEQY 108
>gi|319954616|ref|YP_004165883.1| mammalian cell entry related domain protein [Cellulophaga algicola
DSM 14237]
gi|319423276|gb|ADV50385.1| Mammalian cell entry related domain protein [Cellulophaga algicola
DSM 14237]
Length = 321
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 4/129 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + G+ VV + +L S+ +D + +V GL T + V
Sbjct: 1 MKI-SREIKTGIIVVGGILLFLMGFSYLKSSSLFDNDKMFYAVY--NNVGGLQTGTPVSI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
NG VG++ G+ ++ L + + + A + G+ G I++ +
Sbjct: 58 NGYNVGKVNGIRF-KDDSGQLLVTFSVSNEFEFSNQSRAELYDTGIIGGKGIQIIPMFDG 116
Query: 121 KKTIFQIAT 129
T
Sbjct: 117 AAMAKSGDT 125
>gi|299135584|ref|ZP_07028768.1| Mammalian cell entry related domain protein [Acidobacterium sp.
MP5ACTX8]
gi|298601708|gb|EFI57862.1| Mammalian cell entry related domain protein [Acidobacterium sp.
MP5ACTX8]
Length = 361
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/356 (8%), Positives = 109/356 (30%), Gaps = 19/356 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIR-IPGSVDGLSTDSSVRF 60
E K VGL V+ + ++ ++ ++ +++++ + GL + V
Sbjct: 6 EVKWSQLKVGLIVLISVTLLCTLLFLMTSASGMSPFSKKLMVKTFFQNSGGLKVGAPVSL 65
Query: 61 NGIPVGRIVGLFLDQEYPNH---SLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELS 115
G+ +G + + + + + P L+ + A++ T G+ G T ++++
Sbjct: 66 EGVTIGEVKKVLISTDPARKLTPVFVLMRLDPKFIGSLHKDSRASLSTVGVLGDTVVDIN 125
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + N + K + + I+ ++
Sbjct: 126 SQSANGPELQDGDE-------------LKTLETPNLMDVVKASQGTIESVNVILSKLDHI 172
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ T + ++ ++ + + ++ +++ ++ L+ + D
Sbjct: 173 VDTIQSGQGSVGKLIKDPELYNKATQTIDELHTLTANINEGKGSVGKLMHDDQLYDRLND 232
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + +++ T + + D +K
Sbjct: 233 TAAKLDTIASNLNAGKGSAGKLLNDDQLYNNLNSTLAHTNSLLAEADAGKGGVGLLVKDP 292
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L + + ++ ++ + + + N+ ++ D +
Sbjct: 293 AFARKLNDTVTNLDDLLKGVNQGHGTIGKLATDDAAYTNLNNLLTSSTDLVGAIRK 348
>gi|118619037|ref|YP_907369.1| Mce family protein, Mce5B [Mycobacterium ulcerans Agy99]
gi|118571147|gb|ABL05898.1| Mce family protein, Mce5B [Mycobacterium ulcerans Agy99]
Length = 351
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 6/117 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + +GL + ++ + + ++S + G V GL VR
Sbjct: 1 MKFRGP--LIGLSLFMVVAVALTWMVYVSLRREVAGKTVAYAAVFTD-VYGLREGDGVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + L+ + + +++ + L+ +T A++ Q + G Y+ LS
Sbjct: 58 AGVRVGRVEKIDLEG---KLAKVRFVVQNEQRLFGNTVASVTYQNIVGQRYLGLSLG 111
>gi|145222151|ref|YP_001132829.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145214637|gb|ABP44041.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 459
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/293 (11%), Positives = 78/293 (26%), Gaps = 16/293 (5%)
Query: 3 SKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+++ + V + V+ + + W SR+ Q + S GL VR
Sbjct: 8 TRSRWLRPVLICVLVAVLAIGAYLVWPSRTGQK-------VTAYFTSAVGLYPGDDVRVV 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+PVG I + I D L A + + L +I+L+
Sbjct: 61 GVPVGTIDAIDPRAND---VKITMTIDSDVKLPAEAKALVISPNLVSARFIQLTPAYTGG 117
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKPL 176
+ A R + + ++ DS R + + +
Sbjct: 118 AVLADGAEIGLDRTAVPVEWDEVKEQLTQLSTQLGPNEDSVRGPLTDVVNQAADTFDGNG 177
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + + +S + T + D+ + N ++ + +
Sbjct: 178 DTFRSAVRELSQTAGRLGDSRADLFGTIRNLQILVDALSRSNEQIVQFSNHVASVSQVLA 237
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + + + + + + D
Sbjct: 238 DATTDLDITLGTLNQALTDVRGFLGESNEALIGQVNRLTDFTNLLTEHSDDIE 290
>gi|226227981|ref|YP_002762087.1| putative transporter [Gemmatimonas aurantiaca T-27]
gi|226091172|dbj|BAH39617.1| putative transporter [Gemmatimonas aurantiaca T-27]
Length = 295
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ VGL +++ + W++R + R P GL V
Sbjct: 3 SKRRDEVLVGLLLLTAIVIGLGGTIWIARGGL--SKGYSMYARFPWGA-GLKQGQPVLLA 59
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG + + L + + ++ + + TTA+++ G+ G I L +R +
Sbjct: 60 GVQVGFVDEVKLIPD--GTITVRLQVQKEHQVPAGTTASVKANGIFGDQLIALQPVRGAQ 117
Query: 122 KTIFQIATER 131
+ T
Sbjct: 118 GYMSAGDTIP 127
>gi|77459056|ref|YP_348562.1| hypothetical protein Pfl01_2831 [Pseudomonas fluorescens Pf0-1]
gi|77383059|gb|ABA74572.1| putative membrane protein [Pseudomonas fluorescens Pf0-1]
Length = 551
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/400 (7%), Positives = 91/400 (22%), Gaps = 32/400 (8%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S V + IPVG++V LD + D + +T +
Sbjct: 174 DLGSLDIGSPVYYRKIPVGQVVAYALDADGKGVNIEVFIHAPNDAYVTENTRFWNASGID 233
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+ + + T+ + + +
Sbjct: 234 VNVGANGFAVKTESLSTLLVGGIAFRAPEYSPNDVAAAEERTYDLFEDQQTALAPPNGKA 293
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + + + + +
Sbjct: 294 QYLTLRFDQALRGLKVDAPVEFLGIEIGRVVSVNLDFDAKKR------------------ 335
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
I+ Q +K + + D + + L +
Sbjct: 336 --------SFPLNVGIVIYPQRLGQAHIKMLKVLDHNPDDEAAAVRLIGTFID--NGLRA 385
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
S + + +A + + + +
Sbjct: 386 QARSGNLLTGQLYIALDFFPKAEKVAFDPTARPISVPTVPGSLEQLQEKLEAMIDKLNKL 445
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ +++ ++ L + + + + T +++ + S + L S
Sbjct: 446 P-VERIAGNLDSNL-VELRKGLTQFNAKTLPGVQTTLADVSKTLQSASSTLAEDSPQ-RE 502
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ + +L + + R+P+ ++ GR +
Sbjct: 503 QLTQTLDELGRMSRSLRELSDYLGRHPESLIRGRPDNAAP 542
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+G + +R ++ GL D+ V F GI +GR+V + LD +
Sbjct: 290 NGKAQYLTLRFDQALRGLKVDAPVEFLGIEIGRVVSVNLDFDAKKR 335
>gi|296165091|ref|ZP_06847643.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899550|gb|EFG79004.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 518
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 87/281 (30%), Gaps = 5/281 (1%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F V++ + Y+L + +P S GL S+V
Sbjct: 1 MLTRFIKRQLVMFAVLTAITAVALGWYYLQIPTAMGIGQYTLKAELPAS-GGLYKTSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G +G + + + I + +A + + G Y++L ++
Sbjct: 60 YRGETIGTVTDVEPTATG---ARVTMSIGDRYKIPIDASANVHSVSAVGEQYLDLVSVGN 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
++ T P+ A KI+ + + + L
Sbjct: 117 PRQYFSPGQTITKGTIPTEIGPALDAANRGLAVLPKDKIASLLDETAQAVGGLGPALQRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + I+ NI+ ++ ++ + S ++ A + Q V
Sbjct: 177 VDATQAIAGDFKTNIADVNDIIQNSGPLLDSQVDSGDSIERWSHNLNVLAAQSAENDQHV 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
IL +++ + V ++ ++ ++
Sbjct: 237 QSILTQAAPTADQVNEVFGDVRESLPQTLANLAIVLDMLKR 277
>gi|118619129|ref|YP_907461.1| MCE-family protein, Mce3C_1 [Mycobacterium ulcerans Agy99]
gi|118571239|gb|ABL05990.1| MCE-family protein, Mce3C_1 [Mycobacterium ulcerans Agy99]
Length = 438
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 81/302 (26%), Gaps = 15/302 (4%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+S VG ++I + + GL+T V
Sbjct: 1 MKSFAERNQIVVGAVELAITIGIVVGSLQYDKL-PLFQSGKQYSACF-ADAGGLTTGVRV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ +G VG + + LD L K + L T A I+T+GL G +E+ +
Sbjct: 59 QVSGFRVGEVSSIELDGP---QVLVKFTVDKHIRLGDHTEAAIKTRGLLGTKMLEVISRG 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIE 173
+ Q ++ P + + S + + +
Sbjct: 116 DGQL---QGTIPLDRTRSPYQLPDALGDLATTISGLNTNQLSDSLRVLADTFSDTPPQLR 172
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ +T+ A + T V S+ + T+ + + +A
Sbjct: 173 VAIEGVARFSQTLDERDAQLRGLLTNANKATTVLAERSNQVVSLIANTNALLAELTTQRA 232
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
I Q ++ + + + +++ +
Sbjct: 233 ALDHISGNIAALGQQLHGLIAENEATMRPALDKLNGVLTILDNRKERLQKAIKLLDDYTM 292
Query: 294 SK 295
S
Sbjct: 293 SL 294
>gi|114777486|ref|ZP_01452483.1| Mammalian cell entry-related protein [Mariprofundus ferrooxydans
PV-1]
gi|114552268|gb|EAU54770.1| Mammalian cell entry-related protein [Mariprofundus ferrooxydans
PV-1]
Length = 302
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/286 (14%), Positives = 86/286 (30%), Gaps = 7/286 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ +G FV+ L F+ + V + GL S VR G+ +G
Sbjct: 4 HARLGAFVLVALILLAFATGKIGDIVWPSHQGHIVEAEF-DDLLGLDVQSPVRMAGVKIG 62
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L N +L + + P L ST ATI +GL G + L+ +K + +
Sbjct: 63 VVQQILL---KNNRALVRIALNPGVTLPGSTRATIIGRGLVGEKNLALTAKAGDKTILPE 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
A + A T S + + ++ S + + N
Sbjct: 120 GAIIPSDPAGDINTFIAKA---SGITDDVRALTQSLTGSKSSKGHESFLQLVANINTAAQ 176
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + TT + + T + K +L+N
Sbjct: 177 EITMMVKENRTQVREITTSLQRIMQKLETELPQTTRAGRQFFEEGKKASENLNASLLDNR 236
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + N + + ++ ++ + D ++
Sbjct: 237 ENIYRTLFELRQASENLAAFSDDVRRNPWKLMKEKPEVKPDRRARQ 282
>gi|196228071|ref|ZP_03126938.1| Mammalian cell entry related domain protein [Chthoniobacter flavus
Ellin428]
gi|196227474|gb|EDY21977.1| Mammalian cell entry related domain protein [Chthoniobacter flavus
Ellin428]
Length = 316
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/288 (12%), Positives = 79/288 (27%), Gaps = 3/288 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E K VGLF++ L + R+ Q + +R P + GL ++ V +
Sbjct: 4 ERKGVEFFVGLFLLVGLGVVAGLVVTFGRAGQGLENFYTIRVRFP-NASGLVKNADVLLS 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G +G + IR + IR+ G+ G +YI++
Sbjct: 63 GARIGLTKSAPTLVGENYEVEVELSIRETVRIPRKAQFQIRSNGMLGDSYIDVIVPPNFA 122
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
F E + + I I+ + +
Sbjct: 123 PNDFAEPGELITGKRTGGLDELTTKGSQMIDTLNTDILRKLSEELDEIKQATASINQQLL 182
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + ++ + + ++ + D K +
Sbjct: 183 SKQNLNNLQDTLANLKSATADFSKASKDLDLVVTKSQEAVDSAKLTLKTVDGAAGDLRLG 242
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I + +V+ + S N ++ + + L+++
Sbjct: 243 IGDFRKVA--DSAHSLLNKANAGDGTLGMLLADKQTAENLRALIANLR 288
>gi|171060066|ref|YP_001792415.1| hypothetical protein Lcho_3392 [Leptothrix cholodnii SP-6]
gi|170777511|gb|ACB35650.1| Mammalian cell entry related domain protein [Leptothrix cholodnii
SP-6]
Length = 160
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VGLFV F ++ ++ GL ++V+
Sbjct: 1 MQKSRHDLWVGLFVAIGAAALLFLALKAGNLLAISFEPTYQVVARFDNIGGLKPRAAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + D + + + ++A I T GL G YI L
Sbjct: 61 AGVVVGRVASITFD-DKSYQASVHLDLERRFAFPKDSSAKILTAGLLGEQYIGLEPG-PA 118
Query: 121 KKTIFQIATERNQR 134
+ + +
Sbjct: 119 ENNLAAGDVISQTQ 132
>gi|296115255|ref|ZP_06833896.1| Mammalian cell entry related domain protein [Gluconacetobacter
hansenii ATCC 23769]
gi|295978356|gb|EFG85093.1| Mammalian cell entry related domain protein [Gluconacetobacter
hansenii ATCC 23769]
Length = 318
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 96/280 (34%), Gaps = 8/280 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIPVGR 67
VG+ V+ L F ++ + P + I +P + V GLS ++ GI G
Sbjct: 22 WVGVLVLFSLLILFGAVLEAGVLRSWLTPAGRLRIVLPENGVGGLSVGDNLEVMGIHAGT 81
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I + ++ +++A+ + + + A IR Q + + K +
Sbjct: 82 IRRVRINPSGGMYAIAEIDPDIEPYIRRDSAAVIRRQFVVAGASYIDISRGTGDKLDWSY 141
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
A A P+ + + +I + Q ++ ++ +T A ++
Sbjct: 142 AVLNATNA-----PNPADTITQTFADIRARIMPVLDNAQHMMATMDATITDMHAGKGSVG 196
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ--KVNQILEN 245
++ N+ T + S + +++ D + + +
Sbjct: 197 RLMTNDDLIRQAETTITTLNATISQLTPIEGQLANVMKKADASMANVQKATGDLRNASPQ 256
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + N +S Q+ + + T + Q++ ++ +
Sbjct: 257 LPAITKNLNDASQQLPVLLVQAQTTAHSLQQLVDQLRGMW 296
>gi|329114931|ref|ZP_08243687.1| Hypothetical protein APO_1735 [Acetobacter pomorum DM001]
gi|326695828|gb|EGE47513.1| Hypothetical protein APO_1735 [Acetobacter pomorum DM001]
Length = 181
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 29/121 (23%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 1 MESKN----YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M K+ G V+ + + + + D ++ +DGL S
Sbjct: 8 MAEKSRRSLTELLTGTVVLVAIGGMLVAAV-VGEGRKTDTTGYQLNADFTH-IDGLDIGS 65
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
VR G+ VG++V +D + + +RPD L T A I + L G YI LS
Sbjct: 66 DVRLAGVTVGQVVSETVDP-HSFKAHVTFTVRPDIHLSDDTAAIITSDSLLGGKYIALSP 124
Query: 117 L 117
Sbjct: 125 G 125
>gi|227115414|ref|ZP_03829070.1| putative paraquat-inducible protein [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 548
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/394 (11%), Positives = 108/394 (27%), Gaps = 33/394 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L + S V + IPVGRI L+++ + + + D P
Sbjct: 167 DDLGSLDSGSPVYYRRIPVGRIASYQLNRDGRS---VQLQVFIDAP-------------- 209
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y T + + T + ++ + ++ +
Sbjct: 210 ----YDRFVTPNTRFWNASGVDLSVDANGFRLRTQTLATVMAGGIAFSTPDLDNTIARPE 265
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + D+ +H +V S +T +
Sbjct: 266 PLTTYKLASDRESAL--SPPDGPPTRFKLRFDRSLHGLEVGAPVEFSSVKIGHVTAIELD 323
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+K V I N K Q ++ E T+ E G + S
Sbjct: 324 YNK--TGYRFPTVVSIDVFPNRLGNVLDKLPKQAMSLEQQTAEFTRDLVEHGLRAQVAPS 381
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ T ++ ++ + S +
Sbjct: 382 NL-------LTGQLYISLDFVPDAAKTPFDLNARPLVLPTVDGGFDRLQTQMASIIGKID 434
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + + N + ++ N +L + + + + + + + L+ S L
Sbjct: 435 NLPLDAIGRNMNTTLVEANKALRQVNGQTLPEANRLMQNMQQATRRAQDVLEEDSPLQLG 494
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
I ++++Q T+ +R+P+ ++ GR
Sbjct: 495 -ITQSLQEIQRTLRALRSLAEQIDRHPESLLQGR 527
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKA 85
S + DGP +R S+ GL + V F+ + +G + + LD + ++
Sbjct: 278 SALSPPDGPPTRFKLRFDRSLHGLEVGAPVEFSSVKIGHVTAIELDYNKTGYRFPTVVSI 337
Query: 86 LIRPD 90
+ P+
Sbjct: 338 DVFPN 342
>gi|126436256|ref|YP_001071947.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236056|gb|ABN99456.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 564
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/321 (9%), Positives = 89/321 (27%), Gaps = 13/321 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + +F ++ + I+ ++ V + +P GL S+V
Sbjct: 1 MLTRFVRTQLIIFTIASIVGVSVMIFAYMKVPTLLGIGRLTVTLELPA-AGGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G+++G+ L + + A + + A +R+ G Y+EL
Sbjct: 60 YRGVQIGKVMGVNLTENG---AEATMSLDTSPKVPADLLAEVRSVSAVGEQYVELLPQTD 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + I + +S ++ +I + +++
Sbjct: 117 SGPYLEDGSRISRDKTTIPQEVGPMLDQLSALVDSI--------PSDRIPDLLDETFKAL 168
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
++L + + T D T +
Sbjct: 169 NGAGPDFQSLLDSASKVAGDANSVSDQTRRLIDDVGPLLDSQAESTEAIRTWARSLAGVT 228
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q+++N + + + T + + + + + E
Sbjct: 229 EQLVQNDPELRTVLQQGPGFAQEVSQLLTQIKPTLPILLANLTSVTQVLLTYNPALEQLL 288
Query: 300 FLENIADSTSNMRSSISAIRE 320
+ +
Sbjct: 289 VIFPGIIAAQQSFGLPQNNPT 309
>gi|118619944|ref|YP_908276.1| MCE-family protein Mce6B [Mycobacterium ulcerans Agy99]
gi|118572054|gb|ABL06805.1| MCE-family protein Mce6B [Mycobacterium ulcerans Agy99]
Length = 342
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 92/286 (32%), Gaps = 5/286 (1%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
F + + + +Y R GP A V GL VR G+ VGR+ +
Sbjct: 2 AFFLVVATALTWMVYVTLR-RDVKGPTARYGALFTD-VFGLREGDDVRVAGVRVGRVQKV 59
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
LDQ + +++ P+ T A+I Q + G Y+ L+ R + +
Sbjct: 60 ELDQ---TLARVSFIVQQGQPILTDTIASITYQNIVGQRYLALAPGRTGRGIPIPPGSVI 116
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ G + + +I +++ + ++ S + A
Sbjct: 117 PVERTEPSFDIGTLLNGYEPLFAVLDPDQVNNFTKAVIASLQGDTSALATLVDQTSMLTA 176
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ D + + + S + + + + + + + + ++++E+ +
Sbjct: 177 TFAGNDDALANVIGSLDRVAGSLASQSAEFEHTIAQTRQMVSQFNSRRSELVESTGNMAA 236
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + +R+ + + + + +
Sbjct: 237 VVRQLGGILADVNPQIRQILDRQPGYTKHLLDIEPQAAFVGMNTPL 282
>gi|302551006|ref|ZP_07303348.1| virulence factor Mce family protein [Streptomyces viridochromogenes
DSM 40736]
gi|302468624|gb|EFL31717.1| virulence factor Mce family protein [Streptomyces viridochromogenes
DSM 40736]
Length = 425
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 5/135 (3%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + F ++ + S+ + ++ V S G+ + V
Sbjct: 1 MITRTVKVQLMAFATITAVGVSYVGAEYTGLVDEVLDRGYAVRADFADS-GGVFPGAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ G+PVG++ L L P+ I P + T A + + G Y++L
Sbjct: 60 YRGVPVGKVGALRLT--GPDGVSVDLDIDDGAPRIPADTLAVVANRSAVGEQYVDLQPRA 117
Query: 119 KEKKTIFQIATERNQ 133
+ +T +
Sbjct: 118 SHGPYLLDGSTIPRE 132
>gi|108798625|ref|YP_638822.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867721|ref|YP_937673.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|120401536|ref|YP_951365.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|126434222|ref|YP_001069913.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|145221249|ref|YP_001131927.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315441856|ref|YP_004074735.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|108769044|gb|ABG07766.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693810|gb|ABL90883.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|119954354|gb|ABM11359.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|126234022|gb|ABN97422.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|145213735|gb|ABP43139.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315260159|gb|ADT96900.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 442
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 91/294 (30%), Gaps = 9/294 (3%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M++ + +G V + ++ + GL+T + V
Sbjct: 1 MKTFSERNVIVIGAIGVLLTAAIVAGALNYNKL-PFVSSGKSYSAYFDE-AGGLTTGAPV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R +G P G++ + LD + L + L T A+I+T + G ++L+T
Sbjct: 59 RVSGAPAGQVQSITLDGQ---WVLVTFTVADGIRLGDRTEASIKTTSVLGNKVLDLTTRG 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAE--NTSKKISDSSRHIQKIIENIEKPL 176
+ + IS + S ++ S+ +Q +++ +
Sbjct: 116 AGTLAGTIPVERTTSPYQLPDAIGDLTTTISGLDTGQLSASLAVLSQTLQDTPDDLRFAV 175
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
ET++ A + T V S+ + T+ + + + A
Sbjct: 176 AGIARFSETLNQRDAQLRDLLAHAAKATTVLGERSNDIVRLISDTNAVLAQLRTQSAALD 235
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ I + + ++ + + + +I + ++
Sbjct: 236 EISTSISAVSRQLAGFIAENKTTLKPALEKLNGVLAILDNRKAQIQESIKGLAA 289
>gi|305666569|ref|YP_003862856.1| hypothetical protein FB2170_09896 [Maribacter sp. HTCC2170]
gi|88708840|gb|EAR01075.1| hypothetical protein FB2170_09896 [Maribacter sp. HTCC2170]
Length = 322
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 89/290 (30%), Gaps = 9/290 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+ V+ + +L + +D + V GL + V NG
Sbjct: 4 SREIKTGIIVIGGILLFILGFSYLKSTPLFDNSKTLYAVYHH--VGGLQPGTQVTINGYN 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + ++ L + + ++ A + G+ G I++ +
Sbjct: 62 VGKVNDIRF-KDTSGDLLVTFSVNNEFTFSKNSKAELYDTGIIGGKGIQIKPIFDGAAPA 120
Query: 125 FQIA-----TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
T+ ++ + + I A + + + + E + +
Sbjct: 121 QSGDTLITETKPGLTELVQQKLTPLQQKIEGAFTNADSLLMNVNEVLDAKTKNELRESIS 180
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
N S + ++ + + ++ ++ + L SL+ L +
Sbjct: 181 GLNELMKSLKGSADVMNSLLKNNQDKLDSSLTNFNQLSSNFAKLSDSLNNAGLGRTLTSL 240
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ N+ K + + D + +++D LL DF
Sbjct: 241 ESTVSNLDKILGQVEKGDGSLGKLMKD-EQLYNNLNNASKELDLLLQDFR 289
>gi|295690360|ref|YP_003594053.1| mammalian cell entry related domain-containing protein [Caulobacter
segnis ATCC 21756]
gi|295432263|gb|ADG11435.1| Mammalian cell entry related domain protein [Caulobacter segnis
ATCC 21756]
Length = 164
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 44/126 (34%), Gaps = 4/126 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T++GL +++ S + ++ R G V L+ + V G+ VG
Sbjct: 14 TAMGLMILAAAGGLLAYGVSASDAG--GRGGYPLVARF-GEVGALAPGADVSVAGVKVGA 70
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L ++ + L +TA I T GL G ++ ++
Sbjct: 71 VDRIELAPRSY-LAVVHLSLDKSVALPEDSTAKITTNGLLGGAHVAITPGASSATLGPGG 129
Query: 128 ATERNQ 133
+ Q
Sbjct: 130 EIDNTQ 135
>gi|49072912|gb|AAT51763.1| TrnC3 [Mycobacterium vanbaalenii PYR-1]
Length = 446
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 91/294 (30%), Gaps = 9/294 (3%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M++ + +G V + ++ + GL+T + V
Sbjct: 5 MKTFSERNVIVIGAIGVLLTAAIVAGALNYNKL-PFVSSGKSYSAYFDE-AGGLTTGAPV 62
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R +G P G++ + LD + L + L T A+I+T + G ++L+T
Sbjct: 63 RVSGAPAGQVQSITLDGQ---WVLVTFTVADGIRLGDRTEASIKTTSVLGNKVLDLTTRG 119
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAE--NTSKKISDSSRHIQKIIENIEKPL 176
+ + IS + S ++ S+ +Q +++ +
Sbjct: 120 AGTLAGTIPVERTTSPYQLPDAIGDLTTTISGLDTGQLSASLAVLSQTLQDTPDDLRFAV 179
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
ET++ A + T V S+ + T+ + + + A
Sbjct: 180 AGIARFSETLNQRDAQLRDLLAHAAKATTVLGERSNDIVRLISDTNAVLAQLRTQSAALD 239
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ I + + ++ + + + +I + ++
Sbjct: 240 EISTSISAVSRQLAGFIAENKTTLKPALEKLNGVLAILDNRKAQIQESIKGLAA 293
>gi|311741977|ref|ZP_07715787.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311314470|gb|EFQ84377.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 352
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/123 (18%), Positives = 45/123 (36%), Gaps = 3/123 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
L V ++ S ++ +N G ++ GL S VR + VG++ +
Sbjct: 21 LVVFLVVAGFLTSYLYVITANDRSGDARPFRAEF-ENISGLEVGSDVRIASVVVGKVSEI 79
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + + L +TA +R + L G Y++L + + + AT
Sbjct: 80 DVGAD--AMVTVTFDLNRRVELTDQSTAVVRYKNLIGDRYLQLGEGQPGGQALTTGATIG 137
Query: 132 NQR 134
R
Sbjct: 138 ANR 140
>gi|114563131|ref|YP_750644.1| hypothetical protein Sfri_1960 [Shewanella frigidimarina NCIMB 400]
gi|114334424|gb|ABI71806.1| Mammalian cell entry related domain protein [Shewanella
frigidimarina NCIMB 400]
Length = 327
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 103/290 (35%), Gaps = 8/290 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+S+ ++G F+ + F ++ + S + A V++ SV GL + V+
Sbjct: 3 KSQRLPLAIGAFIFGAIILVFIALLFFSG-GRIFAEKAPVVMFFNSSVQGLQVGAPVKLK 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +G I + +D + A + D L I+ G + + +
Sbjct: 62 GVIIGEISDISIDFPNDSSQGVTAAVHADLLLKRINIKGIQ----VGEEFFSHAIDNGLR 117
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ ++ + + ++ ++ + + + ++++ ++
Sbjct: 118 AQLNYLSLLTGLLYVELDFFPNTSPVFHGEKDQLLELPTIATDFESLSKDLQSLNLKSLV 177
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
N ++I+ K+ +++ + + D + L K++
Sbjct: 178 NNVDNLAQQLSDIAASGKIQQALDNFDNAAKAVKSTAINLDNTQAALGKNGLEVLLKLDN 237
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+L +++ K + + +++ ++R T + ++ + + L S
Sbjct: 238 LLVQ---LNHDEPKFVESLNHSLTELRSTLLSINQLANQAGNTLDQNSPL 284
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 66/188 (35%), Gaps = 4/188 (2%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
H ++ + + L D S + ++N+A S++ +S
Sbjct: 135 DFFPNTSPVFHGEKDQLLELPTIATDFESLSKDLQSLNLKSLVNN-VDNLAQQLSDIAAS 193
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK--ENNSLFKDA 372
+ + + + +T N+ + + E++ K++N+ + +
Sbjct: 194 GKIQQALDNFDNAAKAVKSTAINLDNTQAALGKNGLEVLLKLDNLLVQLNHDEPKFVESL 253
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
++ R T IN+ GN L S L ++ N + +++ T +
Sbjct: 254 NHSLTELRSTLLSINQLANQAGNTLDQNS-PLLIELTNTLEEIRRTARSLRSLSETLDEQ 312
Query: 433 PQDIVWGR 440
P+ I+ G+
Sbjct: 313 PEAIIRGK 320
>gi|206577268|ref|YP_002236395.1| mce family protein [Klebsiella pneumoniae 342]
gi|288933379|ref|YP_003437438.1| hypothetical protein Kvar_0496 [Klebsiella variicola At-22]
gi|290511570|ref|ZP_06550939.1| ABC transport system substrate-binding protein [Klebsiella sp.
1_1_55]
gi|206566326|gb|ACI08102.1| mce family protein [Klebsiella pneumoniae 342]
gi|288888108|gb|ADC56426.1| Mammalian cell entry related domain protein [Klebsiella variicola
At-22]
gi|289776563|gb|EFD84562.1| ABC transport system substrate-binding protein [Klebsiella sp.
1_1_55]
Length = 183
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKNEIWVGVFLLVALLAALFVCLKAANVTSLRTEPTYRLYATFDNIGGLKARSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVELDIDERYNHIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ I + + +
Sbjct: 120 DPDLGTTILKDGGTIQDTKSAMVLED 145
>gi|254776980|ref|ZP_05218496.1| hypothetical protein MaviaA2_20246 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 878
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 35/307 (11%), Positives = 72/307 (23%), Gaps = 8/307 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ V++ L F I ++ Y ++ L V+ G+ VG I +
Sbjct: 19 VLVIAALAAVFVFIAAVAGVQLYRKLTTTAVVAYFSETLALYPGDRVQIMGVRVGSIDKI 78
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + + TA+I L I+LS + A
Sbjct: 79 EPAGD---KMRVTLHYNNKYRVPANATASILNPSLVASRTIQLSPPYTGGPVLRDGAVIP 135
Query: 132 NQR-----AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+R S + I+ +N+ + ++
Sbjct: 136 IERTRVPVEWDQLRDSINAILRQLGPTPQQPAGPFGDIIESAADNLSGKGKQVNETLNSL 195
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S L + T+ + + Q +Q+ + I
Sbjct: 196 SQALTALNEGRGDFVAITKSLARFVTALYQHKQQFVALNDNLAQFTDWFTQSDHQVSDTI 255
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ V + + +V I + F N +
Sbjct: 256 THLDQVLDAARKFVNDNAPGLTHDVGNLADVTTTILQPEPRDGLETALHVLPTFAGNFNN 315
Query: 307 STSNMRS 313
S
Sbjct: 316 LYQPAHS 322
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 33/80 (41%), Gaps = 4/80 (5%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G + +++P ++ L+T+S VR + VG + + L + + + P
Sbjct: 536 RGTGGDHMTIYVQMPDTLA-LNTNSRVRVADVWVGTVRAITL---KDWVATLRLDLDPGV 591
Query: 92 PLYPSTTATIRTQGLAGITY 111
L + TA I L G +
Sbjct: 592 RLPANATAKIGQTSLLGTQH 611
>gi|162455928|ref|YP_001618295.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein [Sorangium cellulosum 'So ce 56']
gi|161166510|emb|CAN97815.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein [Sorangium cellulosum 'So ce 56']
Length = 490
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/374 (12%), Positives = 123/374 (32%), Gaps = 9/374 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG+ + L + + Y + G V +P ++ G+S S V
Sbjct: 1 MAEVSKAAKVGVMTIV-LAGAAYGGYRFVSRDVGGGNGYRVWATLPDAI-GVSPQSRVMI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG + + L Y + + PD PLY R L G +++ LS +
Sbjct: 59 SGIQVGVVDKISL---YNGQARIDIKMSPDVPLYEDAAIGKRATSLIGESFVVLSPGTEG 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K I + + P+ + +E + + + + I
Sbjct: 116 KPRI----PDEGRVLYYIDEPTIQSMQGQVSEILKDVKTVTETLRNTVGSEGGQERLAQI 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T N ++ T + + + ++ + +++ +++++ + I +
Sbjct: 172 LENLAEVTEQMNATVRENRAGVTETINNINQITGDSGPRLREILRNVEQVSRDIRMMTAA 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ ++++V + + V ++D + +
Sbjct: 232 AEVPGRNGQPGELRSAAERVGRATESLESALKHVDSVAARVDRGEGTLGRITRDETLINE 291
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+E + ++ + +S + + R NTI++ ++ ++ +N+
Sbjct: 292 VETVVENVGELVGGLSRFQTVVGLRTDYNFLANTIKSYVELRLQPTEDKYYVVELVNDPR 351
Query: 361 ALKENNSLFKDAQR 374
+ + D
Sbjct: 352 GKTDFQQIDVDTTN 365
>gi|326330427|ref|ZP_08196735.1| PE-PGRS family protein [Nocardioidaceae bacterium Broad-1]
gi|325951702|gb|EGD43734.1| PE-PGRS family protein [Nocardioidaceae bacterium Broad-1]
Length = 456
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/407 (10%), Positives = 115/407 (28%), Gaps = 16/407 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T + + L + + ++ + L + V+ +G+ VG
Sbjct: 4 KTLIAVITALGLVAVLGFVL----MGRGGNDDQAELVAVFDDASPLVPGNVVKASGVDVG 59
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
+I + L + I PL+ ATI TQ L G +I L + +
Sbjct: 60 KITDVEL---RDGKAQVTMRIDRSVLPLHEDAKATITTQDLLGERFIRLHRGSPDAPVMS 116
Query: 126 QIATE---RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ ++ + + ++ S A + + + +
Sbjct: 117 AMTIPTKNTDRVVDLQDVLNAVDTPTSVALSALLTETGEGLQGRGKQADEALAALAPAMK 176
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI--DLQKVN 240
+ + + + + + SS + + + L+ S + ++ + + +
Sbjct: 177 QTSDLAEILEDQNDLLTRLVDNTQPVASSVAADEGRQLDQLVDSATQSLEIVASERAALQ 236
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
L + + + + ++ T R T ++ + + +D + + +
Sbjct: 237 AALARLPQTLRSARAALAELAGTAEPTRRTLKSLRPITDDLDDVSGELQKFADAA--DPA 294
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
L ++ ++ + + + + L ++ L +
Sbjct: 295 LGSLPPVLERADQLLAEAAPVVSALRPAGKDLVPTSRSGAQLMGTALSGKSLTDLMEFAE 354
Query: 361 ALKENNSLFKDAQRAMHTFRDTS-EKINRYIPSIGNNLQNFSQSGLN 406
S + S I I + + + GL
Sbjct: 355 GWSLATSDYDAISHYFKAMVPLSPNSIGDTAAGIAPVVPDDTAHGLP 401
>gi|115378314|ref|ZP_01465480.1| mammalian cell entry-related protein [Stigmatella aurantiaca
DW4/3-1]
gi|310817869|ref|YP_003950227.1| ABC transport system substrate-binding protein [Stigmatella
aurantiaca DW4/3-1]
gi|115364668|gb|EAU63737.1| mammalian cell entry-related protein [Stigmatella aurantiaca
DW4/3-1]
gi|309390941|gb|ADO68400.1| ABC transport system substrate-binding protein [Stigmatella
aurantiaca DW4/3-1]
Length = 394
Score = 78.4 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/388 (8%), Positives = 101/388 (26%), Gaps = 26/388 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + G+FV L + + ++ + + + +V+GLS +S V
Sbjct: 9 RERRFAWRAGIFVTVGLVLAGIVVLFIGKETRLFEDQVKYHAYFS-NVEGLSEESPVWLG 67
Query: 62 GIPVGRIVGLFLDQEYPN---HSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELST 116
G+ VGR+ G+ + + + + + G+ G ++++
Sbjct: 68 GLEVGRVTGIAFAPGADAKNHRIEVSLQVAKKYADRVRADSVVRLSSLGVLGEKAVDITL 127
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ A + + + + ++ S + + L
Sbjct: 128 GNP-----QEPAVAPDSELPTVPSGDLNTLMRAAGQIMDDSMAISRSLRVAVEAYSDPQL 182
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+A L + D ++H +
Sbjct: 183 AKDVAGTVRSLRGLLEEVEQGDGVLHALIYDKEAGQQVRAMVANASQTAQRVDKAVGHVE 242
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ ++ ++ + + ++ L+ D +
Sbjct: 243 ALLGEVRHGQGMAHALIYD---------KEGAKALNELGSAAGQLAGLIEDAKNSPNGAV 293
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTI---NTIENITSNLNDSSQKFAE-- 351
+ +++ S+ + +++IT T+ I +L
Sbjct: 294 HQLVYGDARGMFADLGSAAADLKKITSTVASGEGTVGGLIADPTIYEDLRTVLGNVKRNR 353
Query: 352 -LMSKINNISALKENNSLFKDAQRAMHT 378
L + + +E ++
Sbjct: 354 VLRALVRFTVNNREELDQVGQVKKVSQE 381
>gi|78183819|ref|YP_376253.1| ABC transporter [Synechococcus sp. CC9902]
gi|78168113|gb|ABB25210.1| possible ABC transporter [Synechococcus sp. CC9902]
Length = 286
Score = 78.1 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/284 (13%), Positives = 84/284 (29%), Gaps = 8/284 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG V+ L + W+ + + GL+ S V +
Sbjct: 1 MRRSVRDAIVGFTVLGGLVGFAATGMWMRGI-RLGSSEWRLTANF-NDASGLAERSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAG--ITYIELSTL 117
GI VG + + + + +A+ I + D L TATI + L G +S
Sbjct: 59 RGILVGSVRSIKV---TSSAVVAELEITKGDLRLPLPVTATIGSASLLGGDAQVSLMSRG 115
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + Q + + +++ T + K + I
Sbjct: 116 KPLPENAPLPKAVTCQPKAQLCDGATVMGQEASSITTVTETLQELLTQAKAEKLIPNAAA 175
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ ET + A + +++ V + + N I + + + +
Sbjct: 176 SMEQIDETAKSFEALTVQLQAELLKVDPVLRNLQAATAHANNIVASLDNPETLTSLQQTA 235
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
L + V++ + +R T + ++
Sbjct: 236 TNAAELTAKLDAVGGDVETLTSDPAFMDGLRNVTIGLGALFSEV 279
>gi|84494805|ref|ZP_00993924.1| putative mce-related protein [Janibacter sp. HTCC2649]
gi|84384298|gb|EAQ00178.1| putative mce-related protein [Janibacter sp. HTCC2649]
Length = 323
Score = 78.1 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+ + + F+ + S+ G + GL + VR G+ V
Sbjct: 9 NPLPIGIAGILAIALVLFASFNASKLPLIGGG--QAYAASFSEAGGLRSGDEVRIAGVKV 66
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G++ + L I D + A+IR + L G Y
Sbjct: 67 GKVTDIRLAGN---KVDVDFRITEDVSFGAQSGASIRMRTLLGQKY 109
>gi|226305217|ref|YP_002765175.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|229490609|ref|ZP_04384447.1| MCE family protein [Rhodococcus erythropolis SK121]
gi|226184332|dbj|BAH32436.1| putative Mce family protein [Rhodococcus erythropolis PR4]
gi|229322429|gb|EEN88212.1| MCE family protein [Rhodococcus erythropolis SK121]
Length = 417
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 8/129 (6%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
SK ++ V+ L +++W+ ++ SV G+ S VR G
Sbjct: 11 SKKRSVAIIAAVLIGLLVIGGALWWV----FTRAGTTKITAYFDKSV-GIYDGSDVRVLG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + + + + + +A T + YI+L+ +
Sbjct: 66 VKVGTVESVEPQGD---QVKVELRVDRGIDIPAGASAAQITPSVVADRYIQLTPVFTGGD 122
Query: 123 TIFQIATER 131
+ A
Sbjct: 123 KMASGAVIP 131
>gi|126436757|ref|YP_001072448.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236557|gb|ABN99957.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 437
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/344 (10%), Positives = 87/344 (25%), Gaps = 12/344 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GL V +L + D ++ + +GL V+ G+PVG I
Sbjct: 8 RIGLASVLVLLLIAGLVTVSPALKAADRVT---VVGYFENSNGLFAGDEVQILGVPVGEI 64
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
V + + + A + + L ++L+ + A
Sbjct: 65 VEIEPQPD---RVKVIFWYDARYKVPADANAAVLSPALVTARAVQLTPAYSGGPIMQDNA 121
Query: 129 TERNQRAMITATPSGINYFISNAENTSKK-----ISDSSRHIQKIIENIEKPLTTTIANI 183
R + + + + ++ I +N+ I
Sbjct: 122 VIPEDRTAVPVEWDDFRAQLDSLTEMLQPSEPGGVAPLGAFINTAADNLRGEGANIRDAI 181
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S ++ H + T + + + + + + A+ +
Sbjct: 182 IKFSRAISALSDHSTDIFGTVKNLSILVAALRASSDLMQQLNGNLAAVTALLTADPGAVG 241
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLE 302
+Q + + V + T+ V Q + D L + +
Sbjct: 242 IAMQDLNGAVGEVQSFVAENREALGVTSDKLASVSQAVTDSLDDVKQTLHIAPTALNNYN 301
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
NI S I + + + + +
Sbjct: 302 NIWQPAQGALSGALVINNFANTISFLCGAVQAASRMNGEQSAKL 345
>gi|157148764|ref|YP_001456083.1| hypothetical protein CKO_04596 [Citrobacter koseri ATCC BAA-895]
gi|157085969|gb|ABV15647.1| hypothetical protein CKO_04596 [Citrobacter koseri ATCC BAA-895]
Length = 183
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 56/147 (38%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + I ++ GL S VR
Sbjct: 1 MQTKKSEIWVGIFLLVALLAALFVCLKAANVTSMRTEPTYTIYATFDNIGGLKARSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADISLDPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + + +
Sbjct: 120 DPELGTSILKDGDTIQDTKSAMVLEDM 146
>gi|261342638|ref|ZP_05970496.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Enterobacter cancerogenus ATCC 35316]
gi|288315286|gb|EFC54224.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Enterobacter cancerogenus ATCC 35316]
Length = 182
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VG+F++ L + F + + ++ GL S +R
Sbjct: 1 MQTRKNEIWVGVFLLLALLAALFICLRAADITSIRTEPTYRVYATFDNIGGLKARSPIRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADITLDEKTY-LPRVAMDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
>gi|257054985|ref|YP_003132817.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584857|gb|ACU95990.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 332
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/301 (11%), Positives = 96/301 (31%), Gaps = 17/301 (5%)
Query: 1 MESKNYY--TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + T + + + + +++W+ D V +V G+ S V
Sbjct: 1 MTTRFRWRLTRLATVLTVLAVATAGALWWV----FADHGDKTVTAYFSRAV-GVYPGSDV 55
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VG + + + + D P+ T A I + + Y++LS L
Sbjct: 56 KVLGVSVGEVESVIPE---STRVRVTMTVDRDAPVAADTRALIVSPSVVADRYVQLSDLA 112
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ A + R A P ++ + ++ + + + + ++
Sbjct: 113 HGGPRLADGAVIPSDRT---AVPVELDELYRSLDDLATALGPEGANADGALSDLLDAGAD 169
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + N + + + + ++ + T L +
Sbjct: 170 VLDGTGASFSESVRNFGDLARTLADSDDDLFATIDSLSTFTTMLAGNDKQVREATEQLAR 229
Query: 239 VNQILENIQV----SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
V+ L + + + V + V D R ++ + ++ L+ D + +
Sbjct: 230 VSDTLAADREELSAALATLGDALADVQSFVADNRAALKSNVDKLAELTRLVVDRRASLAE 289
Query: 295 K 295
Sbjct: 290 A 290
>gi|297190648|ref|ZP_06908046.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197719875|gb|EDY63783.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 361
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
F+V + + + ++ ++ G + R GL SVR G+ VG++ +
Sbjct: 33 AFIVVTVLATTALAFGIANTSV--GETSPYRARFTD-ATGLVPGDSVRIAGVKVGQVESV 89
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + + ++ L S TA+I+ + G YI+L
Sbjct: 90 KVVE--RRVAEVAFTVQKGRTLPASVTASIKYLNMVGQRYIDLDQG 133
>gi|118473635|ref|YP_884555.1| mce-family protein mce1f [Mycobacterium smegmatis str. MC2 155]
gi|118174922|gb|ABK75818.1| mce-family protein mce1f [Mycobacterium smegmatis str. MC2 155]
Length = 518
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/287 (10%), Positives = 88/287 (30%), Gaps = 5/287 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG-PMAEVIIRIPGSVDGLSTDSSVRFN 61
++ + +F+ L + R + G M ++ +P S GL ++V +
Sbjct: 4 TRFIKMQLVIFLTLTLVALVVLALFYLRLPTWAGLGMYKLNADLPNS-GGLYATANVTYR 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G +G++ + + + + I + TA + + G +I+L++
Sbjct: 63 GTTIGKVTSVEPSESG---ARVEMNIYDRYKIPADATANVHSVSAVGEQFIDLTSDSGGG 119
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
T P+ A +KI + L +
Sbjct: 120 AYFQPGDTITKATVPAEVGPALDAAEKGLAVLPKEKIGTLLDEAATAFGGLGPSLQRLVD 179
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + I+ NI ++ ++ + S + + A + + +
Sbjct: 180 STQAIAGDFRANIDPVNDIIENSGPIIDSQVNSGDAIQRWAANLNTLAAQSAQNDEALRS 239
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
L+ +++ V ++ + ++ ++ + +
Sbjct: 240 GLQQAAPTADQLNAVFSDVRESLPQTLANLEIVIDMLKRYNKNVEQV 286
>gi|118618291|ref|YP_906623.1| MCE-family protein Mce3D [Mycobacterium ulcerans Agy99]
gi|118570401|gb|ABL05152.1| MCE-family protein Mce3D [Mycobacterium ulcerans Agy99]
Length = 427
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 37/352 (10%), Positives = 94/352 (26%), Gaps = 12/352 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ T V++ ++ +++ + +G+ V
Sbjct: 1 MTTRLRRTR---SVLATTLILVLVAGVIAAMRTAGDATRTLVVAYFDNSNGVFAGDDVLI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG+IV + S + A I + L I+L+
Sbjct: 58 RGVPVGKIVKIEPQP---LRSKISFWFDRKYKVPADAKAAILSPQLVTGRAIQLTPPYSG 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKP 175
T A QR + + + K +N+
Sbjct: 115 GPTTASGAIISQQRTAVPVEWDDLRNQLQRLTELLKPTEPGGVSTLGALINTAADNLRGQ 174
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+T I +S ++ H + + T + + + + + + + ++
Sbjct: 175 GSTIRDAIVELSQTVSTLSDHRNDIFSTVRNLSTLVSALHDSADLLEQLNHNLAAVSSLL 234
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-SSKMKS 294
N++ + ++ + V + + + L D +
Sbjct: 235 ATDPNKVGQAVKDINAVVADVQSFAAEYREAVGTASDKLASISNALVASLDDIKQTLHIG 294
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
L NI + + + A + + + I + +
Sbjct: 295 PTVLQNLNNIFEPANGALTGALAANDFANPISFLCGAIQSASRLGGEQAAKL 346
>gi|303235889|ref|ZP_07322492.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
gi|302483762|gb|EFL46754.1| conserved hypothetical protein [Prevotella disiens FB035-09AN]
Length = 326
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/322 (11%), Positives = 96/322 (29%), Gaps = 17/322 (5%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ L + + FF + +L N + ++ VDGL+ + + NG VG
Sbjct: 8 EIKIALVAILGIIILFFGMKFLKGINLFSSD-VHYTMQF-DKVDGLTPTTPIYSNGFKVG 65
Query: 67 RIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
+ + + + P+ ++ I + + +TA I + + + + K +
Sbjct: 66 SVKDIVYNYDDPSKAIKVDVNIDKNMQIPVGSTAEIVSDFIGNVKINLILG--AGNKYLA 123
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + N + I + I+ ++ ++
Sbjct: 124 EGDVITGGVS---------GGVFGNVKEMVPDIHRLIPKMDSILTSVNAIVSDPAMKHTL 174
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ + +T + L+T+ + MI +
Sbjct: 175 HNADKISTDLTTSSQQLNLLLTQLNGTLPTMTTKANGLLTNANLMILDAKAGVADA---R 231
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ N ++ DV+ T ++ L + +SK S +
Sbjct: 232 NTMKGANVFVNNLNTKVNELDVKTTIVKLNAALDNVNQLTAALNSKKGSLGLLVNDPALY 291
Query: 306 DSTSNMRSSISAIREITDQRQK 327
++ ++ ++ ++ K
Sbjct: 292 NNLNSTLRNVDSLVVNLKAHPK 313
>gi|317046705|ref|YP_004114353.1| mammalian cell entry related domain-containing protein [Pantoea sp.
At-9b]
gi|316948322|gb|ADU67797.1| Mammalian cell entry related domain protein [Pantoea sp. At-9b]
Length = 175
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 3/121 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG+F++ L F ++ + ++ GL S V+
Sbjct: 1 MQSKKNEIWVGVFMLLALLALLFLSLRVADLKSLGTEPTWKLYATFDNIGGLKVSSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ +GR+ + LD + I + +++ IRTQGL G ++ L+
Sbjct: 61 GGVVIGRVTDISLD-DKTLSPRVTMAISDQYADKIPDTSSLAIRTQGLLGEQFLALNLGF 119
Query: 119 K 119
Sbjct: 120 D 120
>gi|33864154|ref|NP_895714.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9313]
gi|33635738|emb|CAE22063.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9313]
Length = 291
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG +V + ++ WL + + + + P GL+ S V +
Sbjct: 3 MRRSVRDAIVGFSIVGAVVAFAGTLLWLRGV-RLGAKVWSIKVNFPD-ATGLAERSPVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGI 109
GI VG +V + + + A I D L A + + L G
Sbjct: 61 RGILVGTVVKIDVTSQS---VRATLEINKGDLRLSKPVVAKVASSSLLGG 107
>gi|86137323|ref|ZP_01055900.1| hypothetical protein MED193_05674 [Roseobacter sp. MED193]
gi|85825658|gb|EAQ45856.1| hypothetical protein MED193_05674 [Roseobacter sp. MED193]
Length = 150
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 43/122 (35%), Gaps = 3/122 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V++ ++ + E+ S++G+ + VR
Sbjct: 1 MSHNTTEVLTGGLVLAAAIGFAVYAGQVAGLST-GNSGYELTASF-RSLEGVGVGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + G+ L+ + + + + + + I ++GL G ++E+
Sbjct: 59 AGVKIGTVTGVELNAQTFR-ADTRFSVLEGIEVPDDSAVIISSEGLLGGNFVEVMPGGSP 117
Query: 121 KK 122
Sbjct: 118 FN 119
>gi|219555968|ref|ZP_03535044.1| MCE-family protein mce1B [Mycobacterium tuberculosis T17]
gi|289568069|ref|ZP_06448296.1| MCE-family protein mce1B [Mycobacterium tuberculosis T17]
gi|289541822|gb|EFD45471.1| MCE-family protein mce1B [Mycobacterium tuberculosis T17]
Length = 332
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 1/102 (0%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY 77
+ FF++ + Q +V GL VR +G+ +G++ L L +
Sbjct: 1 MVLLFFTVMIIVIFGQMRFDRTNGYTAEFSNVSGLRQGQFVRASGVEIGKVKALHLV-DG 59
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ I PLY STTA IR L G Y+EL
Sbjct: 60 GRRVRVEFNIDRSVPLYQSTTAQIRYSDLIGNRYVELKRGEG 101
>gi|120609709|ref|YP_969387.1| hypothetical protein Aave_1015 [Acidovorax citrulli AAC00-1]
gi|326315803|ref|YP_004233475.1| mammalian cell entry related domain-containing protein [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|120588173|gb|ABM31613.1| Mammalian cell entry related domain protein [Acidovorax citrulli
AAC00-1]
gi|323372639|gb|ADX44908.1| Mammalian cell entry related domain protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 163
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 42/117 (35%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGLFV+ F + + + + ++ GL S+VR
Sbjct: 1 MQHSKNDVWVGLFVLLGGAALLFLALQSANLLRVQWQSGYHVTALFDNIGGLKPQSAVRS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ + D + + + ++ I T GL G YI +
Sbjct: 61 AGVVVGRVNSITFD-DKTFQAQVTLEMDKRYAFPKDSSLKILTSGLLGDQYIGIQAG 116
>gi|317508870|ref|ZP_07966509.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316252831|gb|EFV12262.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 331
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 51/151 (33%), Gaps = 4/151 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ V + + F +I + + G V GL + VR G+ VG++ +
Sbjct: 4 VVVFTAIAGVFAAIVMNALRSPVTGATVRYTATFTD-VAGLFVGNDVRIAGVQVGKVETV 62
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L+ + + + +Y T +R Q L G Y+EL + +T
Sbjct: 63 QLNG---HQADVGFSLLKTQQVYKDTIVAVRYQNLLGQRYLELVQPHTPGAPMAPGSTVP 119
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSS 162
+R + + S + T +
Sbjct: 120 VERTIPSFDISKLFNGFRPLFQTLDPAQFNQ 150
>gi|218678848|ref|ZP_03526745.1| Mammalian cell entry related domain protein [Rhizobium etli CIAT
894]
Length = 78
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 2/73 (2%)
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+F+ ++ +N I I +NLQ FS GL D+Q LV ++ TVN+ +D + NF+RNPQ
Sbjct: 2 AGSFKKVADNLNARIGPIADNLQKFSSGGLRDVQTLVNDMRGTVNNLNDTITNFDRNPQR 61
Query: 436 IVWGREKGSVKIY 448
+++G + +VK Y
Sbjct: 62 LIFGGD--TVKQY 72
>gi|329297310|ref|ZP_08254646.1| mammalian cell entry related domain-containing protein [Plautia
stali symbiont]
Length = 182
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 50/132 (37%), Gaps = 3/132 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
K VG+F+++ L F ++ + ++ GL S V+ G+
Sbjct: 6 KKNEIWVGVFMLAALLALLFLSLRVADLKSLGTEPTWKLYATFDNIGGLKVSSPVKIGGV 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+GR+ + LD + I + +++ IRTQGL G Y+ L+ +
Sbjct: 66 VIGRVTDISLD-DKTLSPRVTMDISEQYANKIPDTSSLAIRTQGLLGEQYLALNLGFDDP 124
Query: 122 KTIFQIATERNQ 133
+ + +
Sbjct: 125 ELGSAMLKDGGT 136
>gi|41410183|ref|NP_963019.1| hypothetical protein MAP4085 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41399017|gb|AAS06635.1| hypothetical protein MAP_4085 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 343
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 81/293 (27%), Gaps = 9/293 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +F + F+ I + GL VR
Sbjct: 1 MRITGTAVKLVVFWSVLAMFTVMIIVVFGQVR--FDRTTGYSAVFTD-AGGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ + L + + L + + L TTA+IR L G Y+EL
Sbjct: 58 SGVEVGKVAAVTLS-DKDSRVLVEFNVDRSLALDQGTTASIRYLNLIGDRYLELKRGTSG 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + + P+ + + D ++ I
Sbjct: 117 RRL-----PPGGRIPVEHTQPALDLDALIGGFRPLFQALDPNKVNSIAQSIITVFQGQGA 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + A + D+ +V + + T ++ + N
Sbjct: 172 TITDILDQTAALTAALADRDKAIGEVINNLNTVLATTVKHEKEFDRTVDKLELLITGLKN 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ +++ ++ D T + L++D +
Sbjct: 232 RADPLAAAAAHISDAAATVAGLLGEDRPSLHGTLGHLEGIQQALINDLPTVDN 284
>gi|330939128|gb|EGH42555.1| PqiB family protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 447
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/416 (6%), Positives = 87/416 (20%), Gaps = 36/416 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + F I VG++V L ++ D
Sbjct: 49 FGEKGKRFTLH-TDDLGSLDIGSPIYFRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 107
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + + + +I + +
Sbjct: 108 ITTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKPADENAEFKI- 166
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ ++ + V
Sbjct: 167 -----------------------FDDQTTAMAPPDGEPRYIRMRFNQSLRGLTVNAAVDF 203
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + D K I ++ + +K +
Sbjct: 204 LGVNIGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGAAESKLKELGGSGDEEEQSARVLG 263
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F G + + + + + + + +
Sbjct: 264 AFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQ 323
Query: 333 NTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+E +++ + + +S++ +S+ + + T N
Sbjct: 324 AFVEKLSNLPIDQLAGNLNGTLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFA 382
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 383 E--------DSPARQQLGQAMDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 430
>gi|94309524|ref|YP_582734.1| hypothetical protein Rmet_0579 [Cupriavidus metallidurans CH34]
gi|93353376|gb|ABF07465.1| paraquat-inducible protein B [Cupriavidus metallidurans CH34]
Length = 546
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 46/457 (10%), Positives = 116/457 (25%), Gaps = 47/457 (10%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVII--RIPGSVDG---------- 51
+ + G+ + L + +S + + + + G
Sbjct: 121 RPRFAISGVSGLETLLSGAYIGVDAGKSRESTRNFIGLEVPPVVTADASGRQFVLRAQDL 180
Query: 52 --LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
L S V + + VG++V LD I +
Sbjct: 181 GSLDIGSPVYYRRVQVGQVVAYQLDPNGR---------------------DISLRVFVNK 219
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
Y +L + + + + +T S + + + S +++ +
Sbjct: 220 PYDKLVNGDTRFWHASGVDLKLDANGLKLSTQSLVTVLLGGVAFQAPDNSTATQPASENT 279
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ + + A E A + + D+ + + + +
Sbjct: 280 QFL-LASDQSEAMKEPEELAPALAVLNFDQSVRGLSPGAPVDFRGVIVGQVRSIGIEYQR 338
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI--DHLLSD 287
KA + V + + V + + V + + Q + L
Sbjct: 339 DKKAFRMPVVVEFYPSRMGFRERDVSDEAKKRSIVQGLVKRGMRAQLRTGNLLTGQLYVA 398
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
K+ N + + I +L S
Sbjct: 399 LDFFPKAPPPKDLDLNATMPELPTTPGTFDELQAKLGDIVNKIDKVPFDQIGQDLRTSVV 458
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+++ + + + A+ R T N + S D
Sbjct: 459 SMNKMLDNADKLVTQLHG-DVAPQVLAALQDARRTLNAANGTLASDAP--------LQQD 509
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ ++++L T + ER+P+ ++ G+ +
Sbjct: 510 TRRMMQELTRTAVSLRALTDYLERHPEALLRGKTEKE 546
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 48/448 (10%), Positives = 122/448 (27%), Gaps = 33/448 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + L + GP V R S DGL+ ++VR+ + +G + + L
Sbjct: 34 LIPIVAAVVGVSLLINTLASRGPEINVTFR---SADGLTPGKTAVRYKDVDIGLVKSVRL 90
Query: 74 DQEYPNHSLAKALIRPDTPLY--PSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIAT 129
+ +H +A + D + T + ++G++ +E +
Sbjct: 91 ASDR-SHVIASIELTKDAESFAVKDTRFWVVRPRFAISGVSGLETLLSGAYIGVDAGKSR 149
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
E + + P + S + + S I + + +A +
Sbjct: 150 ESTRNFIGLEVPPVVTADASGRQFVLRAQDLGSLDIGSPVYYRRVQVGQVVAYQLDPNGR 209
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ ++K + + D + + + S
Sbjct: 210 DISLRVFVNKPYDKLVNGDTRFWHASGVDLKLDANGLKLSTQSLVTVLLGGVAFQAPDNS 269
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ S + D E + +E+ + L D S + S +
Sbjct: 270 TATQPASENTQFLLASDQSEAMKEPEELAPALAVLNFDQSVRGLSPGAPVDFRGVIVGQV 329
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI--NNISALKENNS 367
+ + ++ + K ++ + + A +
Sbjct: 330 RSIGIEYQRDKKAFRMPVVVEFYPSRMGFRERDVSDEAKKRSIVQGLVKRGMRAQLRTGN 389
Query: 368 LFK-------------------DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
L D M T + +G+ + + + I
Sbjct: 390 LLTGQLYVALDFFPKAPPPKDLDLNATMPELPTTPGTFDELQAKLGDIVNKIDKVPFDQI 449
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L+ +V + L+N ++ +
Sbjct: 450 G---QDLRTSVVSMNKMLDNADKLVTQL 474
>gi|313200037|ref|YP_004038695.1| mammalian cell entry related domain-containing protein
[Methylovorus sp. MP688]
gi|312439353|gb|ADQ83459.1| Mammalian cell entry related domain protein [Methylovorus sp.
MP688]
Length = 154
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 1/114 (0%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VG+F V+ F + + ++ GL + V+ G+ +GR
Sbjct: 3 LWVGIFAVAGAAALFGLALKVGNLTSSSIGETYTVTAAFENIGGLKPRAPVKSAGVVIGR 62
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ + D + + + P T A I T GL G Y+ L ++
Sbjct: 63 VDNIQFDSKTFE-ANVTLKLDKRYPFPKDTFANIYTAGLLGEQYVGLEAGGDDQ 115
>gi|15839997|ref|NP_335034.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|13880140|gb|AAK44848.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
Length = 539
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 5/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFF-SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + L V + Y+L + + +P S GL ++V
Sbjct: 24 MLTRAIKTQLVLLTVLAVIAVVVLGWYFLRIPSLVGIGRYTLYAELPRS-GGLYRTANVT 82
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI +G++ G+ + A I + +A + + G +++L + R
Sbjct: 83 YRGITIGKVTGVEP---TERGARATMSIDNGYQIPTDASANVHSVSAVGEQFVDLVSTRT 139
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ T P+ A +++ + + + L
Sbjct: 140 SGPYLRHGQTITTTTVPSQIGPALDAANRGLAVLPKDRVASVLHEASEAVGGLGSSLNRL 199
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I + I+ + ++ ID ++ + S + + A V
Sbjct: 200 IEATQAIAHDVRGSLEDIDDIIERSAPIIDSQVNSGNEIARWAANLNTLAAQTAQTDPAV 259
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
IL N +++ + V ++ + ++ ++
Sbjct: 260 RSILANAAPTADQVNATFSDVRESLPQTLANLEVVIDMLKR 300
>gi|312795163|ref|YP_004028085.1| Paraquat-inducible protein B [Burkholderia rhizoxinica HKI 454]
gi|312166938|emb|CBW73941.1| Paraquat-inducible protein B [Burkholderia rhizoxinica HKI 454]
Length = 557
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/395 (9%), Positives = 101/395 (25%), Gaps = 37/395 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
S+ + S V + + VG++VG LD + + P
Sbjct: 194 DSLGSVDIGSPVFYRRVQVGQVVGYSLDPNGTG---VTMQVFVNAP-------------- 236
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + + + T S I S Q
Sbjct: 237 ----YDQYVGENTRWWHASGVDLRLDSGGFKLNTQSLAAMVIGGIAFQSPPSEPVGA--Q 290
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + + + + ++ + V + +
Sbjct: 291 ARNDAHFRLASDEADAMRASDGEAVPFVLNFNQSLRGLSVGAPVDFRGIVLGRVRSIGID 350
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
D + A + ++ + + V ++ + G +
Sbjct: 351 YDPVRHAFLMPVTVELYPDRLGPRVREAARTGGVRA----RATMIESLVKSGLRAQLRTG 406
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + F + RS I + + + + + D
Sbjct: 407 NLITSQLYVALDLFPNAPPAKVNMSRSPIELPTVPNTLDELQLQVADIAKKLDKVPFDEI 466
Query: 347 Q-KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+ + + N++ + L A+ + T + T +
Sbjct: 467 GVRLNSTLKRANSLFKQLDTQ-LAPQAKDTLSTAQRTFHAAQSSLQQ--------DSPLQ 517
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ +++L T+ + + ER+P+ ++ G+
Sbjct: 518 TDVRQALQQLTRTLQSLNALSDYLERHPESLLRGK 552
Score = 56.5 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 3/106 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS---LAKALI 87
DG ++ S+ GLS + V F GI +GR+ + +D + H+ +
Sbjct: 307 MRASDGEAVPFVLNFNQSLRGLSVGAPVDFRGIVLGRVRSIGIDYDPVRHAFLMPVTVEL 366
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
PD A A T IE + + +Q
Sbjct: 367 YPDRLGPRVREAARTGGVRARATMIESLVKSGLRAQLRTGNLITSQ 412
>gi|215444707|ref|ZP_03431459.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289756673|ref|ZP_06516051.1| MCE-family protein mce2F [Mycobacterium tuberculosis T85]
gi|294996107|ref|ZP_06801798.1| virulence factor mce family protein [Mycobacterium tuberculosis
210]
gi|289712237|gb|EFD76249.1| MCE-family protein mce2F [Mycobacterium tuberculosis T85]
gi|326902426|gb|EGE49359.1| MCE-family protein mce2F [Mycobacterium tuberculosis W-148]
Length = 516
Score = 78.1 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 5/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFF-SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + L V + Y+L + + +P S GL ++V
Sbjct: 1 MLTRAIKTQLVLLTVLAVIAVVVLGWYFLRIPSLVGIGRYTLYAELPRS-GGLYRTANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI +G++ G+ + A I + +A + + G +++L + R
Sbjct: 60 YRGITIGKVTGVEP---TERGARATMSIDNGYQIPTDASANVHSVSAVGEQFVDLVSTRT 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ T P+ A +++ + + + L
Sbjct: 117 SGPYLRHGQTITTTTVPSQIGPALDAANRGLAVLPKDRVASVLHEASEAVGGLGSSLNRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I + I+ + ++ ID ++ + S + + A V
Sbjct: 177 IEATQAIAHDVRGSLEDIDDIIERSAPIIDSQVNSGNEIARWAANLNTLAAQTAQTDPAV 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
IL N +++ + V ++ + ++ ++
Sbjct: 237 RSILANAAPTADQVNATFSDVRESLPQTLANLEVVIDMLKR 277
>gi|332140254|ref|YP_004425992.1| mce family protein [Alteromonas macleodii str. 'Deep ecotype']
gi|327550276|gb|AEA96994.1| mce family protein [Alteromonas macleodii str. 'Deep ecotype']
Length = 157
Score = 77.7 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 2/131 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG+FV+ + ++ + ++ GL S+V+
Sbjct: 1 MSKYKTEVMVGVFVMLTIGALLLLALKVANQTVATEGDTYTLYAKFDNIGGLKPRSAVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LDQE + I + +++ +I T GL G Y+
Sbjct: 61 GGVTVGRVSSISLDQEDFTPV-VELSILNEYNGFPETSSVSILTSGLLGEQYVGFQPGFS 119
Query: 120 EKKTIFQIATE 130
+
Sbjct: 120 FDGVANLQDGD 130
>gi|282877835|ref|ZP_06286647.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
gi|281300046|gb|EFA92403.1| conserved hypothetical protein [Prevotella buccalis ATCC 35310]
Length = 300
Score = 77.7 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/289 (10%), Positives = 88/289 (30%), Gaps = 6/289 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + L V+ + F + +L ++ + G + + GL+ S +
Sbjct: 1 MIKVRNEIKIALVAVAGIVALFIGMNFLKGTHLFTGSKSYHFA--FDDISGLTKSSPIYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + + D + N + A + + TTA I + L I +
Sbjct: 59 SGYQVGLVKDIIFDYSHKNKTKVIAEMDKQMKIPTGTTAFISSDVLGNIKVTLNIAPNRG 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + I + K+ + ++ + +
Sbjct: 119 EFIQEGGLIPGDIDRGPM---GEVTSMIPAVKQMLPKLDSILLSLNLLLADPAIASSVHN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + + + ++ + + + +L ++ A ++KV+
Sbjct: 176 VQDMTANLTKTSRELNSVVAKLNREIPGVVTKTNRILDHSETFTANLSQVDVATTMRKVD 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + +++ + + + + D + D L+ +
Sbjct: 236 EAMADVKAVTAKINSNEGTLGLLMRDPS-LYNQLNTAVRSADSLMVNIR 283
>gi|190571411|ref|YP_001975769.1| Mammalian cell entry related protein [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|213018810|ref|ZP_03334618.1| Mammalian cell entry related protein [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
gi|190357683|emb|CAQ55127.1| Mammalian cell entry related protein [Wolbachia endosymbiont of
Culex quinquefasciatus Pel]
gi|212995761|gb|EEB56401.1| Mammalian cell entry related protein [Wolbachia endosymbiont of
Culex quinquefasciatus JHB]
Length = 151
Score = 77.7 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 6/130 (4%)
Query: 1 MESKNY--YTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M ++ G FV+ +F FF+I LS + ++ +G+ S
Sbjct: 1 MR-RSNILEIIAGSFVLIFTIFLVFFAINKLSYIKRNYKDCYKIHGLFTD-ANGVGVGDS 58
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V+ +G+ +G I G+ LD+ + I D L ++A I + G+ G ++ +
Sbjct: 59 VKISGVEIGSITGVSLDKATY-IARIDMCISRDIKLPIDSSALIASSGVVGSKFVNILPG 117
Query: 118 RKEKKTIFQI 127
K
Sbjct: 118 ADPKLISHGG 127
>gi|254230933|ref|ZP_04924260.1| MCE-family protein mce2F [Mycobacterium tuberculosis C]
gi|124599992|gb|EAY59002.1| MCE-family protein mce2F [Mycobacterium tuberculosis C]
Length = 539
Score = 77.7 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 5/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFF-SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + L V + Y+L + + +P S GL ++V
Sbjct: 24 MLTRAIKTQLVLLTVLAVIAVVVLGWYFLRIPSLVGIGRYTLYAELPRS-GGLYRTANVT 82
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI +G++ G+ + A I + +A + + G +++L + R
Sbjct: 83 YRGITIGKVTGVEP---TERGARATMSIDNGYQIPTDASANVHSVSAVGEQFVDLVSTRT 139
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ T P+ A +++ + + + L
Sbjct: 140 SGPYLRHGQTITTTTVPSQIGPALDAANRGLAVLPKDRVASVLHEASEAVGGLGSSLNRL 199
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I + I+ + ++ ID ++ + S + + A V
Sbjct: 200 IEATQAIAHDVRGSLEDIDDIIERSAPIIDSQVNSGNEIARWAANLNTLAAQTAQTDPAV 259
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
IL N +++ + V ++ + ++ ++
Sbjct: 260 RSILANAAPTADQVNATFSDVRESLPQTLANLEVVIDMLKR 300
>gi|120405102|ref|YP_954931.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957920|gb|ABM14925.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 367
Score = 77.7 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/343 (12%), Positives = 95/343 (27%), Gaps = 5/343 (1%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G V ++ R + GL+ + V +GI VG
Sbjct: 10 ARAGFIGVVLIILVIAVGLQPERLLSWATA-IRYQALFAE-AGGLTVGNDVTVSGIKVGS 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + LD +L I L TTA IRT L G + L + Q+
Sbjct: 68 VSSIELD---NGDALVGFTIDGKYALGSDTTAHIRTGTLLGERVLALDSDGSGTLDPQQV 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + T + + + + ++ S + + ++ + L T + +S
Sbjct: 125 IPTTRTSSPYSLTDAVSELTANTRDTDTASLNQSLDTLAQTLDQVAPQLGPTFDGLSRLS 184
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
L + + +++ T +++ L + + + +L NI
Sbjct: 185 QSLNSRNESLAELLRTAGDVTGIFSERSSQVNALILNANDLLAVLNERRYAITSLLANIS 244
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
S + E ++ +K L+ + +
Sbjct: 245 AVSQQLSGVVADNEAELAPALERLNNVTQMLEKNRDNLAKMLPGAAKYYLTQGEIVSNGA 304
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
N ++ +I +++ +
Sbjct: 305 YYNALIPNIQPAQLLQPFLDYAFGFRNGVDIGQPPDNAGPRAQ 347
>gi|15607734|ref|NP_215108.1| MCE-family protein MCE2F [Mycobacterium tuberculosis H37Rv]
gi|31791776|ref|NP_854269.1| MCE-family protein MCE2F [Mycobacterium bovis AF2122/97]
gi|121636512|ref|YP_976735.1| mce-family protein mce2F [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660364|ref|YP_001281887.1| MCE-family protein Mce2F [Mycobacterium tuberculosis H37Ra]
gi|148821797|ref|YP_001286551.1| MCE-family protein mce2F [Mycobacterium tuberculosis F11]
gi|167969017|ref|ZP_02551294.1| virulence factor mce family protein [Mycobacterium tuberculosis
H37Ra]
gi|215402362|ref|ZP_03414543.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|215410135|ref|ZP_03418943.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|215425826|ref|ZP_03423745.1| virulence factor mce family protein [Mycobacterium tuberculosis
T92]
gi|215429427|ref|ZP_03427346.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|218752234|ref|ZP_03531030.1| virulence factor mce family protein [Mycobacterium tuberculosis GM
1503]
gi|219556436|ref|ZP_03535512.1| virulence factor mce family protein [Mycobacterium tuberculosis
T17]
gi|224988984|ref|YP_002643671.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253797529|ref|YP_003030530.1| MCE-family protein mce2F [Mycobacterium tuberculosis KZN 1435]
gi|254549550|ref|ZP_05139997.1| virulence factor mce family protein [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260185471|ref|ZP_05762945.1| virulence factor mce family protein [Mycobacterium tuberculosis
CPHL_A]
gi|260199598|ref|ZP_05767089.1| virulence factor mce family protein [Mycobacterium tuberculosis
T46]
gi|260203758|ref|ZP_05771249.1| virulence factor mce family protein [Mycobacterium tuberculosis
K85]
gi|289441983|ref|ZP_06431727.1| MCE-family protein mce2F [Mycobacterium tuberculosis T46]
gi|289446147|ref|ZP_06435891.1| MCE-family protein mce2F [Mycobacterium tuberculosis CPHL_A]
gi|289568527|ref|ZP_06448754.1| MCE-family protein mce2F [Mycobacterium tuberculosis T17]
gi|289573194|ref|ZP_06453421.1| MCE-family protein mce2F [Mycobacterium tuberculosis K85]
gi|289749091|ref|ZP_06508469.1| MCE-family protein mce2F [Mycobacterium tuberculosis T92]
gi|289752634|ref|ZP_06512012.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289760714|ref|ZP_06520092.1| MCE-family protein mce2F [Mycobacterium tuberculosis GM 1503]
gi|297633089|ref|ZP_06950869.1| virulence factor mce family protein [Mycobacterium tuberculosis KZN
4207]
gi|297730067|ref|ZP_06959185.1| virulence factor mce family protein [Mycobacterium tuberculosis KZN
R506]
gi|298524081|ref|ZP_07011490.1| mce-family protein mce2f [Mycobacterium tuberculosis 94_M4241A]
gi|306774699|ref|ZP_07413036.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu001]
gi|306781571|ref|ZP_07419908.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu002]
gi|306783237|ref|ZP_07421559.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu003]
gi|306794373|ref|ZP_07432675.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu005]
gi|306796343|ref|ZP_07434645.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu006]
gi|306802202|ref|ZP_07438870.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu008]
gi|306806410|ref|ZP_07443078.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu007]
gi|306966610|ref|ZP_07479271.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu009]
gi|306970803|ref|ZP_07483464.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu010]
gi|307078526|ref|ZP_07487696.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu011]
gi|307083090|ref|ZP_07492203.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu012]
gi|313657394|ref|ZP_07814274.1| virulence factor mce family protein [Mycobacterium tuberculosis KZN
V2475]
gi|2222764|emb|CAB09959.1| MCE-FAMILY PROTEIN MCE2F [Mycobacterium tuberculosis H37Rv]
gi|31617363|emb|CAD93472.1| MCE-FAMILY PROTEIN MCE2F [Mycobacterium bovis AF2122/97]
gi|121492159|emb|CAL70625.1| mce-family protein mce2F [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148504516|gb|ABQ72325.1| MCE-family protein Mce2F [Mycobacterium tuberculosis H37Ra]
gi|148720324|gb|ABR04949.1| MCE-family protein mce2F [Mycobacterium tuberculosis F11]
gi|224772097|dbj|BAH24903.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253319032|gb|ACT23635.1| MCE-family protein mce2F [Mycobacterium tuberculosis KZN 1435]
gi|289414902|gb|EFD12142.1| MCE-family protein mce2F [Mycobacterium tuberculosis T46]
gi|289419105|gb|EFD16306.1| MCE-family protein mce2F [Mycobacterium tuberculosis CPHL_A]
gi|289537625|gb|EFD42203.1| MCE-family protein mce2F [Mycobacterium tuberculosis K85]
gi|289542281|gb|EFD45929.1| MCE-family protein mce2F [Mycobacterium tuberculosis T17]
gi|289689678|gb|EFD57107.1| MCE-family protein mce2F [Mycobacterium tuberculosis T92]
gi|289693221|gb|EFD60650.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289708220|gb|EFD72236.1| MCE-family protein mce2F [Mycobacterium tuberculosis GM 1503]
gi|298493875|gb|EFI29169.1| mce-family protein mce2f [Mycobacterium tuberculosis 94_M4241A]
gi|308216597|gb|EFO75996.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu001]
gi|308325666|gb|EFP14517.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu002]
gi|308331903|gb|EFP20754.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu003]
gi|308337269|gb|EFP26120.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu005]
gi|308343194|gb|EFP32045.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu006]
gi|308347062|gb|EFP35913.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu007]
gi|308351005|gb|EFP39856.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu008]
gi|308355638|gb|EFP44489.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu009]
gi|308359593|gb|EFP48444.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu010]
gi|308363521|gb|EFP52372.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu011]
gi|308367204|gb|EFP56055.1| MCE-family protein mce2F [Mycobacterium tuberculosis SUMu012]
gi|323720947|gb|EGB30012.1| MCE-family protein mce2F [Mycobacterium tuberculosis CDC1551A]
gi|328457312|gb|AEB02735.1| MCE-family protein mce2F [Mycobacterium tuberculosis KZN 4207]
Length = 516
Score = 77.7 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 5/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFF-SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + L V + Y+L + + +P S GL ++V
Sbjct: 1 MLTRAIKTQLVLLTVLAVIAVVVLGWYFLRIPSLVGIGRYTLYAELPRS-GGLYRTANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI +G++ G+ + A I + +A + + G +++L + R
Sbjct: 60 YRGITIGKVTGVEP---TERGARATMSIDNGYQIPTDASANVHSVSAVGEQFVDLVSTRT 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ T P+ A +++ + + + L
Sbjct: 117 SGPYLRHGQTITTTTVPSQIGPALDAANRGLAVLPKDRVASVLHEASEAVGGLGSSLNRL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I + I+ + ++ ID ++ + S + + A V
Sbjct: 177 IEATQAIAHDVRGSLEDIDDIIERSAPIIDSQVNSGNEIARWAANLNTLAAQTAQTDPAV 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
IL N +++ + V ++ + ++ ++
Sbjct: 237 RSILANAAPTADQVNATFSDVRESLPQTLANLEVVIDMLKR 277
>gi|260593159|ref|ZP_05858617.1| mce related protein [Prevotella veroralis F0319]
gi|260534867|gb|EEX17484.1| mce related protein [Prevotella veroralis F0319]
Length = 326
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/305 (14%), Positives = 99/305 (32%), Gaps = 10/305 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+ L + + FF + +L + + +R +V GLST + V NG VG
Sbjct: 9 VKIALVAILGVVVLFFGMQFLKGLSIFSTDT-HYQMRFS-NVSGLSTSTPVYANGFKVGT 66
Query: 68 IVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D P + I + T A I + + + + KT+
Sbjct: 67 VKSIEYDYAKPGEPIIVGVDIDKSMNIPEGTKADIISDVMGNVKVDLVLGTSS--KTLAS 124
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + + + K+ I + + + ++I N++ +
Sbjct: 125 NGIIDGRINDGALGR--MKDMVPSIQKMLPKLDSILVSINSL--LADPAVRSSIHNVDQV 180
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ L N+ +++++ + + +K + + + I + N
Sbjct: 181 TANLTNSTREVNQLLAQMNHSLPALTTK-AGRVMDGVNDLMANANGGITEARGAIHGANG 239
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+S+ N S V T+ V T + K++ M L +
Sbjct: 240 MISTLNNKVSGIDVEGTMAKVNTTLDHMNSLTAKLNSNEGSLGLLMNDASLYNNLNSTMR 299
Query: 307 STSNM 311
S ++
Sbjct: 300 SADSL 304
>gi|113866709|ref|YP_725198.1| paraquat-inducible protein B [Ralstonia eutropha H16]
gi|113525485|emb|CAJ91830.1| Paraquat-inducible protein B [Ralstonia eutropha H16]
Length = 551
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/389 (9%), Positives = 102/389 (26%), Gaps = 30/389 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L S V + + VG++V LD + + P TA R +G+
Sbjct: 189 LDIGSPVYYRRVLVGQVVAYQLDPNGR---DLTLRVFVNKPYDKLVTADTRFWHASGVDL 245
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + A ++ + + +
Sbjct: 246 KLDAGGL----KLSTQSLVTVLLGGVAFQAPDHTTATDAAAENTQFLLANDQAEAMKEPE 301
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
P + +++ + ++ + ++ ++ L
Sbjct: 302 ELAPTLAVLNFDQSVRGLSPGAPVDFRGVIVGQVRSIGIEYQRDKKAFRMPVVVELYPSR 361
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ V ++ + + T + + + K D +
Sbjct: 362 MGFRERDVEDRERARKIIQGLLQRGMRAQLRTGNLLTGQLYVALDFFPKAPPAKVDLDAP 421
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ T+ + + + + ++LN + +
Sbjct: 422 IPEFATTPGTFDQLQAQ-------VGDIVNRIDKVPFDQIGQDLRTTVASLNRTLATADK 474
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L+ ++N + A+ R T N + S D + +
Sbjct: 475 LVQQLNG--------DVAPQVLAALQDARKTLTAANGTLASDAP--------LQQDTRRM 518
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++++ T + ER+P+ ++ G+
Sbjct: 519 LQEMTRTATSLRTLTDYLERHPEALLRGK 547
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
++ SV GLS + V F G+ VG++ + ++ + +
Sbjct: 309 VLNFDQSVRGLSPGAPVDFRGVIVGQVRSIGIEYQRDKKA 348
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/447 (10%), Positives = 125/447 (27%), Gaps = 32/447 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + I L + GP V R + +GL+ ++VR+ + +G + + L
Sbjct: 40 LIPIVAAVVGISLLVHTLTSRGPEITVTFR---TAEGLTPGKTAVRYKDVDIGLVKSVRL 96
Query: 74 DQEYPNHSLAKALIRPDTPLY--PSTTATIRTQGL--AGITYIELSTLRKEKKTIFQIAT 129
++ +H +A + D + T + +G++ +E +
Sbjct: 97 ARDR-SHVVASIDLTKDAENFAVADTRFWVVRPRFAASGVSGLETLLSGAYIGVDAGKSN 155
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
E + P + S + + S I + + +A +
Sbjct: 156 ESARDFKGLEVPPVVTTDASGKQFVLRASELGSLDIGSPVYYRRVLVGQVVAYQLDPNGR 215
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
++K + + D + + + +
Sbjct: 216 DLTLRVFVNKPYDKLVTADTRFWHASGVDLKLDAGGLKLSTQSLVTVLLGGVAFQAPDHT 275
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ + + +D E + +E+ + L D S + S +
Sbjct: 276 TATDAAAENTQFLLANDQAEAMKEPEELAPTLAVLNFDQSVRGLSPGAPVDFRGVIVGQV 335
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI--NNISALKENNS 367
+ + ++ + + ++ +++ + + A +
Sbjct: 336 RSIGIEYQRDKKAFRMPVVVELYPSRMGFRERDVEDRERARKIIQGLLQRGMRAQLRTGN 395
Query: 368 LFK------------------DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
L D + F T ++ +G+ + + + I
Sbjct: 396 LLTGQLYVALDFFPKAPPAKVDLDAPIPEFATTPGTFDQLQAQVGDIVNRIDKVPFDQIG 455
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L+ TV + L ++ Q +
Sbjct: 456 ---QDLRTTVASLNRTLATADKLVQQL 479
>gi|108801577|ref|YP_641774.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119870731|ref|YP_940683.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771996|gb|ABG10718.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119696820|gb|ABL93893.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 453
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/296 (10%), Positives = 78/296 (26%), Gaps = 10/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S + VGL + ++ + + I S GL VR
Sbjct: 1 MKSHGRWMRVGLAALLVVTLAVGIYLV------WPSRTGNKITAYFTSAVGLYPGDEVRI 54
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG+I + E + + A + L +I+L+
Sbjct: 55 VGVPVGKIDTIDPRAED---VKVTMTLDHGVQVPADAKALMIAPNLVAARFIQLTPAYTG 111
Query: 121 KKTIFQIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A ++ A+ + + + + +
Sbjct: 112 GPVMQDGAAIGLDRTAVPVEWDEVKEQLTALSAQLGPQQGSMQGPLSAFVNQAADTFDGN 171
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ L+ + T + + ++ A Q +
Sbjct: 172 GDSFRQALRELSQTAGRLGDSRTDLFGTVRNLQVLVNALSNSNEQIVQFSNHVASVSQVL 231
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ ++ + ++ V + + + + +L+D S ++
Sbjct: 232 AESTADLDNTLGTLNQALLDVRDLLDENNDALIGQISRLADFTQILTDHSEDIEQI 287
>gi|254363553|ref|ZP_04979599.1| MCE-family protein mce2F [Mycobacterium tuberculosis str. Haarlem]
gi|289744308|ref|ZP_06503686.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|134149067|gb|EBA41112.1| MCE-family protein mce2F [Mycobacterium tuberculosis str. Haarlem]
gi|289684836|gb|EFD52324.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
Length = 531
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 5/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFF-SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + L V + Y+L + + +P S GL ++V
Sbjct: 16 MLTRAIKTQLVLLTVLAVIAVVVLGWYFLRIPSLVGIGRYTLYAELPRS-GGLYRTANVT 74
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI +G++ G+ + A I + +A + + G +++L + R
Sbjct: 75 YRGITIGKVTGVEP---TERGARATMSIDNGYQIPTDASANVHSVSAVGEQFVDLVSTRT 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ T P+ A +++ + + + L
Sbjct: 132 SGPYLRHGQTITTTTVPSQIGPALDAANRGLAVLPKDRVASVLHEASEAVGGLGSSLNRL 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I + I+ + ++ ID ++ + S + + A V
Sbjct: 192 IEATQAIAHDVRGSLEDIDDIIERSAPIIDSQVNSGNEIARWAANLNTLAAQTAQTDPAV 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
IL N +++ + V ++ + ++ ++
Sbjct: 252 RSILANAAPTADQVNATFSDVRESLPQTLANLEVVIDMLKR 292
>gi|254819941|ref|ZP_05224942.1| virulence factor mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 439
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/339 (10%), Positives = 92/339 (27%), Gaps = 11/339 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++ I + RS G ++ + GL SV G+PVG+I +
Sbjct: 2 AIALTAVLLGGIVTVVRSAAGVGRTT--VVGYFANSTGLYNGDSVVILGVPVGKIEKIEP 59
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + + A I + L I+L+ + A Q
Sbjct: 60 EPD---RVRITFWLNDKYKVPADVKAAILSPSLVTPRSIQLTPAYTGGPALADHAVIPQQ 116
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSR-----HIQKIIENIEKPLTTTIANIETIST 188
R + + + + I +N+ + +S
Sbjct: 117 RTAVPVEYDDFRQQLEKLTQVLQPTAPGGTSTLGAFINTAADNLRGQGPDIRKTVIELSQ 176
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H + + T + + + + + + + + N++ ++
Sbjct: 177 AISALGDHSNDLFSTVKNLSILVSALHDSSDLLQQLNQNLAEVTGLLANDPNEVANAVRN 236
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS-KMKSKETSAFLENIADS 307
++ V + T+ V Q + L D + NI
Sbjct: 237 LNDVVGDVRGFVAENRDALGTTSDKLASVTQAVTDSLGDVKQILHTAPTAFQNFLNIYQP 296
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ A + Q + + + + +
Sbjct: 297 AQGTLTGALAFNNFANTIQFLCGAVEAASRLGAKESAKL 335
>gi|254283741|ref|ZP_04958709.1| mammalian cell entry related [gamma proteobacterium NOR51-B]
gi|219679944|gb|EED36293.1| mammalian cell entry related [gamma proteobacterium NOR51-B]
Length = 323
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 34/313 (10%), Positives = 85/313 (27%), Gaps = 24/313 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K T +G FV+ + + + ++ N YD V++ SV GL+ + V
Sbjct: 1 MTEKTVNTLLGAFVIGAVSIAVIAFLLMAG-NAYDKSSERVVMVFDSSVKGLTVGAPVAL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRP------------------DTPLYPSTTATIR 102
G+ +G + + + ++ + D + A +
Sbjct: 60 RGVNIGEVTDIRVLFRDTDNLNLLMEVEAILQRGRVTRLSGSTNSMTDEIIAAGLRAQLN 119
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
+Q L R R I P+ + E +
Sbjct: 120 SQSLLTGLLYIQLDFFP-----NTPINLRATRDDILEVPTIPSRIDMLFEEIDRLDLPRL 174
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+ + T +T+ I+ + + + +
Sbjct: 175 LSDVQRTALALRRFTENEDFNSFPATINETLEKSIEIAEDSKALLARLEPKLDQTLSSAA 234
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + + Q L+ ++ + + + + + + + Q ++
Sbjct: 235 AASKTLERELPVIAQSFENSLDQLKQTLASLEGAGENLEAALDPDAPLLYSLQATLDELT 294
Query: 283 HLLSDFSSKMKSK 295
+S +S
Sbjct: 295 KAGRAINSLARSV 307
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 74/244 (30%), Gaps = 4/244 (1%)
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
+ + + ++ S+ I A L+ + +
Sbjct: 81 NLLMEVEAILQRGRVTRLSGSTNSMTDEIIAAGLRAQLNSQSLLTGLLYIQLDFFPNTPI 140
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ R+ + +ID L + ++ + ++ A + +
Sbjct: 141 NLRATRDDILEVPTIPSRIDMLFEEID-RLDLPRLLSDVQRTALALRRFTENEDFNSFPA 199
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL--KENNSLFKDAQRAMHTFR 380
+ + +I E+ + L K + +S S +E + + + ++ +
Sbjct: 200 TINETLEKSIEIAEDSKALLARLEPKLDQTLSSAAAASKTLERELPVIAQSFENSLDQLK 259
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
T + ++ L + L +Q + +L + + + E PQ ++ GR
Sbjct: 260 QTLASLEGAGENLEAAL-DPDAPLLYSLQATLDELTKAGRAINSLARSVEEQPQSLILGR 318
Query: 441 EKGS 444
+
Sbjct: 319 SGEA 322
>gi|187734674|ref|YP_001876786.1| Mammalian cell entry related domain protein [Akkermansia
muciniphila ATCC BAA-835]
gi|187424726|gb|ACD04005.1| Mammalian cell entry related domain protein [Akkermansia
muciniphila ATCC BAA-835]
Length = 334
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/339 (12%), Positives = 103/339 (30%), Gaps = 16/339 (4%)
Query: 1 MESK-NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ K T VG+F+++ + I + I GL DS +R
Sbjct: 1 MKQKLKPETWVGIFLIAGILMIIGVILGFGNIKTSKEQTYPINIIFKD-AAGLIKDSQIR 59
Query: 60 FNGIPVGRIVG-LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL-STL 117
G+ VG++ L N + +A I+ D + + + Q + G YI++
Sbjct: 60 LGGVTVGKVTKAPELLPSG-NEVMLEASIQSDVKIQQGSVFRVDMQNILGDKYIDIVPPA 118
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + I AT Q S + +NA +++I + I+K +NI+ +
Sbjct: 119 QPTHEYILPHATIIGQPE------SDFSKIKNNAVGATEEILKILKQIEKNSDNIDDAIL 172
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ ++ I + + S + L+ +
Sbjct: 173 NIGEAAKGLAQTTRLINEGILNRENIQNLGSVLSQINRAGEQLPGLMEETRS-----SVA 227
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + + + + + V + T ++ ++I +D
Sbjct: 228 AMKDTVRDARKLIAGAEEKLNTLDPAVKAIPPTLAALRKASEQISSFTADARKNQGFLGL 287
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIE 336
+ + ++ + +
Sbjct: 288 LMYDARFRANAQEFIRNLRDYGILRYRNPNEPQVKPDPR 326
>gi|298208778|ref|YP_003716957.1| hypothetical protein CA2559_11078 [Croceibacter atlanticus
HTCC2559]
gi|83848705|gb|EAP86574.1| hypothetical protein CA2559_11078 [Croceibacter atlanticus
HTCC2559]
Length = 316
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/298 (12%), Positives = 95/298 (31%), Gaps = 6/298 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ V+S + F Y+L +N DG + V+GL+ S V NG+
Sbjct: 4 TREVKTAVLVLSAIALLIFGYYFLKGNNLLDGSRTFYAVY--DDVEGLARSSKVTINGLQ 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + + + + + D ++ A I G+ G + + ++ +
Sbjct: 62 VGKVTDIQII-DSRGNLAITFTVENDFEFSKNSIARIYGGGIIGGKSLAIVPTYEQGQMA 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
T ++ +N ++ + + + S + I P T
Sbjct: 121 KDGDTLNSEIEEGLL--ELVNDRLTPLQKKIENVIVSVDSLVNGFNEILDPNTRQNLRNS 178
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
S +T + TF + ++ + + ++ + I+
Sbjct: 179 FASLDRTMASLENTSGTLNGILTDNKPKLDRTFTNLDEMSYNFNSFSDSLAEVNLAGIVN 238
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ + + + + + +T V + +V +D ++ + +
Sbjct: 239 DFEEIAADLKNVAAKANSTDGTVGKLLND-PKVYDNLDRATKQLEQLLQDVKLNPKRY 295
>gi|300782536|ref|YP_003762827.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|41581800|gb|AAS07744.1| putative lipoprotein [Amycolatopsis mediterranei S699]
gi|299792050|gb|ADJ42425.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 342
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 5/115 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+G+FVV + F+ ++ N L + VR G+
Sbjct: 6 APLIKLGIFVVVTVLFTTILGISIANINTTSTNAYNAR---FTDATLLLPNDDVRIAGVR 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
VG++ + + + + + L TA I+ + L G Y+ L
Sbjct: 63 VGQVKDVHIV--DKRQAEVEFEVDAGRTLPAGVTAQIKFRNLVGQRYVSLGEGDD 115
>gi|300782537|ref|YP_003762828.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|41581801|gb|AAS07745.1| putative lipoprotein [Amycolatopsis mediterranei S699]
gi|299792051|gb|ADJ42426.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 328
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/289 (13%), Positives = 91/289 (31%), Gaps = 8/289 (2%)
Query: 1 MES--KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+S K + L + +L +F + G GL D+ V
Sbjct: 1 MKSFQKRNPVPIALVGIVVLALAFTAALNSDDLPVIGGGTT-YSAEFSE-ASGLQKDNDV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ + LD ++ D L T+A I+ + L G Y+ L
Sbjct: 59 RIAGVKVGKVSDIALDG---ASVKVSFKVK-DAWLGDRTSAAIKIKTLLGQKYLSLDPQG 114
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ A + + +K+++ S I + N + +
Sbjct: 115 ETALNPGTGIPRDRTMAPYDVLDAFRGLSQTVDNIDTKQLAQSFDTISQTFANTPQDVKG 174
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++ + +S +A+ + ++ T+ + ++ + A
Sbjct: 175 ALSGLSKLSDTIASRDQQLSNLLANTRQVSQTLVDRDAEVQKLLDDGNDLLAELAKREDA 234
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ +L+ + + D + V + Q+ L++
Sbjct: 235 ITALLDGSRELATQLQGLIDDNGKQLDPVLTQLDQLTSMLQRNQDSLAE 283
>gi|302185704|ref|ZP_07262377.1| PqiB family protein [Pseudomonas syringae pv. syringae 642]
Length = 559
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/416 (6%), Positives = 87/416 (20%), Gaps = 36/416 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + F I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYFRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + + + +I + +
Sbjct: 220 ITTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKPADENAEFKI- 278
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ ++ + V
Sbjct: 279 -----------------------FDDQTTAMAPPDGEPRYIRMRFNQSLRGLTVNAAVDF 315
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + D K I ++ + +K +
Sbjct: 316 LGVNIGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGAAESKLKELGGSGDEEEQSARVLG 375
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F G + + + + + + + +
Sbjct: 376 AFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQ 435
Query: 333 NTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+E +++ + + +S++ +S+ + + T N
Sbjct: 436 AFVEKLSNLPIDQLAGNLNGTLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFA 494
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 495 E--------DSPARQQLGQAMDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
>gi|118467558|ref|YP_890121.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118168845|gb|ABK69741.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 564
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 6/153 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F + +F +++L V G+ +++V
Sbjct: 1 MIDRLTRLQLTIFAIVTVFTVGAISLFYLQLPAAVGIGTYHVNANFVA-GGGIYPNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VGR+ + L + +AK + +T + + TAT+++ G YI+L
Sbjct: 60 YRGVTVGRVESVGLAPDG---VVAKMRLNSNTSIPENVTATVKSVSAVGEQYIDLVPPDD 116
Query: 120 EKK-TIFQIATERNQRAMITATPSGINYFISNA 151
+ AT + + SG+ +
Sbjct: 117 THVGKLRNGATIAQENTRVGQDISGLLHEADTL 149
>gi|218264326|ref|ZP_03478183.1| hypothetical protein PRABACTJOHN_03874 [Parabacteroides johnsonii
DSM 18315]
gi|218222094|gb|EEC94744.1| hypothetical protein PRABACTJOHN_03874 [Parabacteroides johnsonii
DSM 18315]
Length = 294
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 90/294 (30%), Gaps = 9/294 (3%)
Query: 1 MES-KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M++ +GL + L + I +L N + V+ +V G++ S V
Sbjct: 1 MKNVFTKEAKIGLVSIVSLALLYLGINYLKGINLFKPTNHYVVAC--TNVKGVTVSSPVF 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G VG + + D + + + + + TI L G +
Sbjct: 59 VEGFKVGLVREIVYDYDAVDKISIDISLEDHMKINKGSYITIVNSFLGGGELHI-HLNKY 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A R S + E KI +Q ++ + +
Sbjct: 118 VDDYLKPGAVIEG-RMESDMMQSVQEKILPQVELLLPKIDSILGGLQTLVNHPALAQSLN 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
T S +++ M + V SD K D+ T L K+ A + V
Sbjct: 177 NIETTTNSLAVSSRQ---LNQMLSKDVPGIMSDLKVITGNFADVSTDLKKLDLATTVNAV 233
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
N L+N++ + + + ++D R LL D K
Sbjct: 234 NATLDNVEQMTRKLNSKDNSMGLLLND-RALYDNLNSTADNASKLLLDLRQNPK 286
>gi|289552847|ref|ZP_06442057.1| MCE-family protein mce2F [Mycobacterium tuberculosis KZN 605]
gi|289437479|gb|EFD19972.1| MCE-family protein mce2F [Mycobacterium tuberculosis KZN 605]
Length = 520
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 89/281 (31%), Gaps = 5/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFF-SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + L V + Y+L + + +P S GL ++V
Sbjct: 5 MLTRAIKTQLVLLTVLAVIAVVVLGWYFLRIPSLVGIGRYTLYAELPRS-GGLYRTANVT 63
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI +G++ G+ + A I + +A + + G +++L + R
Sbjct: 64 YRGITIGKVTGVEP---TERGARATMSIDNGYQIPTDASANVHSVSAVGEQFVDLVSTRT 120
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ T P+ A +++ + + + L
Sbjct: 121 SGPYLRHGQTITTTTVPSQIGPALDAANRGLAVLPKDRVASVLHEASEAVGGLGSSLNRL 180
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I + I+ + ++ ID ++ + S + + A V
Sbjct: 181 IEATQAIAHDVRGSLEDIDDIIERSAPIIDSQVNSGNEIARWAANLNTLAAQTAQTDPAV 240
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
IL N +++ + V ++ + ++ ++
Sbjct: 241 RSILANAAPTADQVNATFSDVRESLPQTLANLEVVIDMLKR 281
>gi|209964250|ref|YP_002297165.1| ABC transporter substrate binding protein, putative [Rhodospirillum
centenum SW]
gi|209957716|gb|ACI98352.1| ABC transporter substrate binding protein, putative [Rhodospirillum
centenum SW]
Length = 173
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
F F Y S G + R S GL + VR +G+ VG +V +LD++
Sbjct: 20 FFLFFAYQSSNVRTVSG--YRLEARFS-STGGLQPGADVRISGVRVGTVVNQYLDKQTFQ 76
Query: 80 HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
L + L TTA I ++ L G +++L
Sbjct: 77 AVLV-LEVDTSVRLPEDTTAVIASESLLGGRFLDLQPG 113
>gi|226361062|ref|YP_002778840.1| Mce family protein [Rhodococcus opacus B4]
gi|226239547|dbj|BAH49895.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 359
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 101/310 (32%), Gaps = 9/310 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V L V +++ + + +N G + V L+ VR G+ VG++
Sbjct: 8 LVKLIVFAVVTILATGLLAATIANLGGGGGTKFNAIFSD-VTSLNEGDEVRIAGVRVGQV 66
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + + + + L STTATIR + L G YI L ++
Sbjct: 67 EKIAIHDD--REAEVEFTVSERDWLPASTTATIRFRNLVGQRYIALEQGEGQQGMKMSG- 123
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ M P+ + + + + + + I+ + E +
Sbjct: 124 --GDTIPMERTKPAVNLTTLFDGFRPLFQTLSAEDVNKLSYQIIQVFQGESGTITELVKN 181
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL---QKVNQILEN 245
+ + DK V + +D T N D + SL + + + +
Sbjct: 182 TASLTNTVADKDRVIGAVINNLNDVLATVNQRDDQLDSLIVNTQQLVTGLANERGTVGSA 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + ++D + T ++E+ + + ++ +S +++ A
Sbjct: 242 VTSLAGLTDATADLLEPTRPSIQESITSLNTLATTLNRNSDTVNSVLQTLPVKLEKLGRA 301
Query: 306 DSTSNMRSSI 315
S +
Sbjct: 302 ASYGSWFQFY 311
>gi|189184155|ref|YP_001937940.1| ABC transport system substrate-binding protein [Orientia
tsutsugamushi str. Ikeda]
gi|189180926|dbj|BAG40706.1| ABC transport system substrate-binding protein [Orientia
tsutsugamushi str. Ikeda]
Length = 161
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 1/123 (0%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T +G V+ + + Y + + +V+GL+ SSV +GI +G
Sbjct: 7 ETFIGFCVMLFVTLCIYFGYKTYNDYYIKDNNFKTVFATFQNVEGLNKGSSVFVSGIKIG 66
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ L L + + + D L + A I +GL G YI + +E +
Sbjct: 67 TVEKLTLVPSSFD-VAVELKLSADINLPNDSQAIIMNRGLLGEKYITIIPGIEENYIADK 125
Query: 127 IAT 129
Sbjct: 126 GEI 128
>gi|186474287|ref|YP_001861629.1| hypothetical protein Bphy_5506 [Burkholderia phymatum STM815]
gi|184196619|gb|ACC74583.1| Mammalian cell entry related domain protein [Burkholderia phymatum
STM815]
Length = 533
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/444 (9%), Positives = 114/444 (25%), Gaps = 48/444 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVII--RIPGSVDG------------LSTDSSVRF 60
+S L F + ++ Q + + V G + + V F
Sbjct: 123 ISTLLSGAFIGMDIGKTKQARRDYTGLEVPPVFASDVPGREFVLKATDLGSVDVGTPVYF 182
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ VG++ LD++ + + P Y
Sbjct: 183 RRLQVGQVTSFDLDKDGGG---VTLHVFINAP------------------YDRYVNRDSR 221
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I + T S ++ + + S + ++ +
Sbjct: 222 FWQAGGIDLTLGTDGVQINTQSVVSILVGGLAFETPANSLTLPEVEPKATFPLFATRS-- 279
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + + + + T+ ++ ++ +
Sbjct: 280 ---DALKQHESIVEMFAFDFRGSVRGLVVGAPVDFRGITVGEVSAIYTRVDPVTKQISIP 336
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++ + + + + R E G + + F
Sbjct: 337 VEVKLYPERFTSRYATEPKGGRVGENPRTLADFLVERGLRGQLKTGSLLTGQLYIALDFF 396
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ R+ + + S I + S + K A+ ++
Sbjct: 397 PDAPKAHVDWSRTPPELPTTPSGLQSLQESLNRIIARVDSLPLEQIGKNAQQTLANTSLL 456
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
N + A+ A+ + T + N + + D + VR+L T
Sbjct: 457 MRNLNTQVVPQAKNALTAAQATLDSANTALQP--------DSALQQDTSDAVRELARTAA 508
Query: 421 HFDDCLNNFERNPQDIVWGREKGS 444
F + +R+P+ ++ G+ + +
Sbjct: 509 SFRALSDYLQRHPEALLRGKTEDA 532
>gi|327399069|ref|YP_004339938.1| Mammalian cell entry related domain-containing protein [Hippea
maritima DSM 10411]
gi|327181698|gb|AEA33879.1| Mammalian cell entry related domain protein [Hippea maritima DSM
10411]
Length = 291
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/199 (23%), Positives = 78/199 (39%), Gaps = 3/199 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME K Y VG+FV+ + WL + Y I+ ++ GL DS V++
Sbjct: 1 MEPKVNYALVGIFVIIFSIIGIGIVLWLIGGSNY-TNYKRYIVYTNSNISGLHVDSDVKY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + +DQ +P+ LI + PL + A I + GL GI+YI L
Sbjct: 60 KGLSVGKVEDILIDQRHPDFFKIIILIERNLPLKANMAARISSNGLTGISYINLIYTNNP 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
K + +I + PS I S T+ + S I +++N +
Sbjct: 120 PKL--PGYLKNEPYPVIGSIPSNIEEISSVIMETADSLKSISNKINVLLDNSTENNIKHF 177
Query: 181 ANIETISTVLANNISHIDK 199
+ ++
Sbjct: 178 IKNSNDAAAQLALAANHLN 196
>gi|51473895|ref|YP_067652.1| hypothetical protein RT0711 [Rickettsia typhi str. Wilmington]
gi|51460207|gb|AAU04170.1| conserved hypothetical protein / possible ABC transporter substrate
binding protein [Rickettsia typhi str. Wilmington]
Length = 149
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
+ + ++ +V S +G++ S V +GI VG + + LD + ++
Sbjct: 26 YKTGTSIISSKGYQVTANF-QSAEGIAVGSDVMISGIKVGSVTKITLDPDRF-YASVYLN 83
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
I D + + A + T GL G YI +
Sbjct: 84 INDDVKIPKDSKAQVVTNGLLGGKYIAIIPGNG 116
>gi|239994340|ref|ZP_04714864.1| mce family protein [Alteromonas macleodii ATCC 27126]
Length = 157
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 45/131 (34%), Gaps = 2/131 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG+FV+ + ++ + ++ GL S+V+
Sbjct: 1 MSKYKTEVMVGVFVMLTIGALLLLALKVANQTVATEGDTYTLYAKFDNIGGLKPRSAVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LDQE + I + +++ +I T GL G Y+
Sbjct: 61 GGVTVGRVSSITLDQEDFTPV-VELSILNEYNGFPETSSVSILTSGLLGEQYVGFQPGFS 119
Query: 120 EKKTIFQIATE 130
+
Sbjct: 120 FDGVANLQNGD 130
>gi|254822750|ref|ZP_05227751.1| virulence factor mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 419
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/283 (11%), Positives = 76/283 (26%), Gaps = 12/283 (4%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++++ +Y LS I+ S GL VR G+PVG I +
Sbjct: 16 IIALVAVLVGGVYVLSSQGNNRK-----IVGHFASAVGLYPGDQVRILGVPVGTIDTIEP 70
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ D + A I + L +I+L+ + A+
Sbjct: 71 RPSD---VKITMSVSKDVKVPKDAKAIIMSPNLVAARFIQLTPAYTGGPEMADGASIGPD 127
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R A P + + + ++ ++ +Q + T
Sbjct: 128 RT---AVPVEWDEVKESLTKLAVQLGPTAGSLQGPLGAAINQAADTFDGKGQSFHSALRE 184
Query: 194 ISHIDKMMHTTQ-VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+S + ++ + + + ++ + N
Sbjct: 185 LSQAAGRLGDSRGDIFGTVKNLQVVVNALSSSNEQIVQFADSVASVSQVLADSSRHLDNT 244
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + E T + ++ L S +
Sbjct: 245 LGTLNTALSDIRGFLHEHNSTIVDTVNNLNDLAKTLSDESDDI 287
>gi|118465867|ref|YP_883681.1| virulence factor Mce [Mycobacterium avium 104]
gi|118167154|gb|ABK68051.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 343
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/293 (12%), Positives = 81/293 (27%), Gaps = 9/293 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +F + F+ I + GL VR
Sbjct: 1 MRITGTAVKLVVFWSVLAMFTVMIIVVFGQVR--FDRTTGYSAVFTD-AGGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ VG++ + L + + L + + L TTA+IR L G Y+EL
Sbjct: 58 SGVEVGKVAAVTLSGKD-SRVLVEFNVDRSLALDQGTTASIRYLNLIGDRYLELKRGTSG 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + + P+ + + D ++ I
Sbjct: 117 RRL-----PPGGRIPVEHTQPALDLDALIGGFRPLFQALDPNKVNSIAQSIITVFQGQGA 171
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + A + D+ +V + + T ++ + N
Sbjct: 172 TITDILDQTAALTAALADRDKAIGEVINNLNTVLATTVKHEKEFDRTVDKLELLITGLKN 231
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ +++ ++ D T + L++D +
Sbjct: 232 RADPLAAAAAHISDAAATVAGLLGEDRPSLHGTLGHLEGIQQALINDLPTADN 284
>gi|78211760|ref|YP_380539.1| ABC transporter [Synechococcus sp. CC9605]
gi|78196219|gb|ABB33984.1| possible ABC transporter [Synechococcus sp. CC9605]
Length = 286
Score = 77.7 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 76/282 (26%), Gaps = 8/282 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG V+ + + WL + + R GL+ S V +
Sbjct: 1 MRRSVRDAIVGFTVIGGIIGFASTALWLRGV-RLGASHWTLTARF-DDAAGLAERSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI +G + + + E +A+ I D L T T+ L G
Sbjct: 59 RGILIGAVRSIEVTPE---AVVAELEINKGDLRLSRPVTVTVGAGSLLGGDAQVALVSSG 115
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + Q A + E S ++ E+ +
Sbjct: 116 --EPLPQDAPLPRGVDCQPTRQLCNGGTVVGREAPSLSTVTATMQELLAQVQDERVIPNV 173
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
A++E + + ++++ + + + I + + + K
Sbjct: 174 AASLEQMEATTKEFEALTVQLLNELAKAAPVIRNLESATAHVNNIAASLDNPQTVSEFKQ 233
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + V + + + + ++
Sbjct: 234 TAANAAQLTAKIDAVGGDVAQLTGDPEFMKGVRNLTIGLGEL 275
>gi|254458216|ref|ZP_05071642.1| mammalian cell entry related [Campylobacterales bacterium GD 1]
gi|207085052|gb|EDZ62338.1| mammalian cell entry related [Campylobacterales bacterium GD 1]
Length = 300
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/279 (13%), Positives = 81/279 (29%), Gaps = 6/279 (2%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
YWL + + + + I SV GL+ D++V++ GI VG++ L ++ +
Sbjct: 1 MLAFTYWLLKPAE-ETQTQKYNILFDESVLGLNLDAAVKYRGISVGKVSRLRINPKNSEQ 59
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI-----FQIATERNQRA 135
+ I TP+ +T A + QG+ G++YI LS + + + + +
Sbjct: 60 VEVQVTILKTTPVKETTVAKLTAQGITGLSYINLSLGDNGAANLVAKEGEEYPVIKTEDS 119
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
+ + T + + T + +
Sbjct: 120 FFEQFEKSLESVSTKLSKTLSGTQKLLAENNQENITLLLKSTASFMTQMDKLLSDEAIAN 179
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ + T D + + I +N L +
Sbjct: 180 FHSSIKNFDNATKKIDVMMPKIEHFVDNSVAWENKIAKTFSSIMNSYLGIKASMDRFKLA 239
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
N + T ++ HL+ +
Sbjct: 240 VDSGDFNLKEISTDIVPTMNNTLIELQHLMIRIEGALNQ 278
>gi|330965858|gb|EGH66118.1| PqiB family protein [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 559
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/416 (7%), Positives = 87/416 (20%), Gaps = 36/416 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + + I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYYRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + I + + T + + I
Sbjct: 220 ITTDTRFWNASGV--------------------DITVGASGVKVNTQSLTSIISGGIAFR 259
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ + E T + + + V
Sbjct: 260 EPNWSPDSKPADENAEFKIFEDQTTALAPPDGEPRYIRMRFNQSLRGLAVNASVDFLGVT 319
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ D + + + L + + D+
Sbjct: 320 IGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGTAESKLKELGGAGDE----EEQSARVLG 375
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F G + + + + S + + +
Sbjct: 376 AFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVSFNAKARPLEIPTVPGSFDKLQEQLQ 435
Query: 333 NTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+E ++ + + +S++ S+ + + T N
Sbjct: 436 AFVEKLSKLPIDQLAGNLNGTLSELQKTLKQVNG-SVLPQMRGTLQQAEKTLGTANDSFA 494
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 495 E--------DSPARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
>gi|300865776|ref|ZP_07110531.1| methyl-accepting chemotaxis sensory transducer [Oscillatoria sp.
PCC 6506]
gi|300336217|emb|CBN55684.1| methyl-accepting chemotaxis sensory transducer [Oscillatoria sp.
PCC 6506]
Length = 479
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/363 (12%), Positives = 114/363 (31%), Gaps = 9/363 (2%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DT 91
Q V++ P +V G+ + VR+ G+ VG+I L I P D
Sbjct: 33 QLGNRSYNVLVEFP-NVQGMQVGTPVRYRGVSVGKISALKPGPNG---VEVVLEIAPADL 88
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ GL G ++++ A ++ T + +
Sbjct: 89 VISRDVLIEANKSGLIGEAAVDITP-LSLLPDAAIAANPLSKNCPNTIICNNSRLKGNAG 147
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ + I + + +I+ ++ A ++ + + +
Sbjct: 148 ASLEELIRSALNFTNLYNDPELFANIKSISKNTAVAAQDAVQLTRNLSSLTQSAKVELGT 207
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
S+ I L + ++ + + E+
Sbjct: 208 LSQLIKTEIGGLNQLAQEEFGNLNQSVEGNLGGIATEIGKVSATGDASIRAVTGAAIESA 267
Query: 272 QTFQEVGQKIDHLLSDFSS--KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ ++ +I+ S ++ L NI ++ +R ++S++ I ++ ++
Sbjct: 268 NSVKQAANQINITASQANALLTTNRAMLVTTLNNINQTSQELRVAVSSLSPIVNRIEQ-G 326
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
IN +E +++N +S +L + +NN + L A+ + + +N
Sbjct: 327 QLINNLEVLSANAAQASVNLRDLSTTVNNPTNLLVLQQTLDSARVTFQNMQKITSDLNEL 386
Query: 390 IPS 392
Sbjct: 387 TGD 389
>gi|302525564|ref|ZP_07277906.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302434459|gb|EFL06275.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 326
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/267 (13%), Positives = 93/267 (34%), Gaps = 5/267 (1%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+L ++ + S S G S GL+ D+ V+ G+ VG++ + L
Sbjct: 1 MLIVLVTAVTYFSDSIPMFGNGTTYTAAFAESA-GLAPDNEVQVAGVKVGQVTSVEL--- 56
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
L K ++ + ++TA+I + L G Y+ L T + + R
Sbjct: 57 GHKQVLVKFRVK-GVRVGDASTASIEIKTLLGEKYLALDTKGGGTQAPGDTIPVQRTRTP 115
Query: 137 ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISH 196
+ + + +++++ S + +++ + L T++ + +S +++ +
Sbjct: 116 FQLQDAFNQLSTTVGDIDTQQLAQSFTALSDSLKDSPQYLKDTLSGLSALSKTVSSRDAD 175
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS 256
+ ++ T + +N +L ++++ +L+ Q S
Sbjct: 176 LHTLLANTSKISKTLSDRNAQLQQVISDGNLLLTELQQRREQISALLKGTQEISKQLSGL 235
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDH 283
+ +V Q+
Sbjct: 236 VADNRTQIGPTLAALGKVTDVLQRNQG 262
>gi|325674881|ref|ZP_08154568.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|325554467|gb|EGD24142.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 447
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 83/284 (29%), Gaps = 9/284 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL + + + +L S GL VR G+ VG +
Sbjct: 37 GLVIALVAAVGLGAAVFL--LPGLGKNTVYAHFV---STTGLYEGDDVRVLGVNVGTVEK 91
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ + + + D + A I Q L +++L+ + + AT
Sbjct: 92 IEPGEND---AKVTMYVDDDVRIPADAKAVIVAQNLVSSRFVQLTPVYDGGDEMADGATI 148
Query: 131 R-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
++ A+ + + D + + I+ L +
Sbjct: 149 SIDRTAVPVEWDEIKTELTKLSTALGPEGLDDQGSLARFIDTAGANLDGNGDALRRTLRQ 208
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
L++ + + + T + + + + ++ A + + + +
Sbjct: 209 LSDTMHTLSEGRTDLFSTIRNLQAFVSALSSSNQQIVQFGGRLASVSDLLATSSDELGTA 268
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
++ + V V D R+ + +L+D +++
Sbjct: 269 LSDLNLAVGDVQRFVADNRDGLSESVQRLADATQVLADKRPEIE 312
>gi|312138213|ref|YP_004005549.1| mce family protein mce2d [Rhodococcus equi 103S]
gi|311887552|emb|CBH46864.1| putative Mce family protein Mce2D [Rhodococcus equi 103S]
Length = 459
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 83/284 (29%), Gaps = 9/284 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL + + + +L S GL VR G+ VG +
Sbjct: 49 GLVIALVAAVGLGAAVFL--LPGLGKNTVYAHFV---STTGLYEGDDVRVLGVNVGTVEK 103
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ + + + D + A I Q L +++L+ + + AT
Sbjct: 104 IEPGEND---AKVTMYVDDDVRIPADAKAVIVAQNLVSSRFVQLTPVYDGGDEMADGATI 160
Query: 131 R-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
++ A+ + + D + + I+ L +
Sbjct: 161 SIDRTAVPVEWDEIKTELTKLSTALGPEGLDDQGSLARFIDTAGANLDGNGDALRRTLRQ 220
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
L++ + + + T + + + + T+ A + + + +
Sbjct: 221 LSDTMHTLSEGRTDLFSTIRNLQAFVSALSSTNQQIVQFGGRLASVSDLLATSSDELGTA 280
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
++ + V V D R+ + +L+D +++
Sbjct: 281 LSDLNLAVGDVQRFVADNRDGLSESVQRLADATQVLADKRPEIE 324
>gi|317407702|gb|EFV87634.1| membrane protein [Achromobacter xylosoxidans C54]
Length = 557
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 54/405 (13%), Positives = 123/405 (30%), Gaps = 32/405 (7%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L S V F I VGR++G LD+ N + + T T+
Sbjct: 181 DLGSLDIGSPVYFRRINVGRVIGYELDKTG-NAVNVEVFVDA----PNDKFVTNGTRFWN 235
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
K + + S + A +T ++ + +
Sbjct: 236 ASGVDFSVNAEGLKVRTQSLVSMAVGGVAFEPVYSARDANTPAAADTHFELYATEAAAKA 295
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ P+ V A + + TQ+ F + D
Sbjct: 296 NPDGEAFPIRMRFDQSIRGLAVGAAIDFSGITLGNVTQINMDFDPVSKRFFALVDATLYP 355
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+++ + D + + I + + I H +R +T + ++ +L +
Sbjct: 356 ERLGRVYDEVREHAIKDGDEAGGRLLG------IMIKHGLRAQLRTANLLTGQLYVVLDE 409
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
F + + I + + I + KI + I +L +
Sbjct: 410 FPNVKPVEFKMTTPAMIPTVPGQLDQLQQQVSNIVAKIDKI-----PFDKIGEDLRTTLA 464
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
++LM++++ + +AQ + RD+ +N + S + N
Sbjct: 465 STSKLMNRLDK--------QVAPEAQGVLKQARDSMANLNALLASDASLPVNA------- 509
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
+ +++L + + NP+ ++ GR + +P+
Sbjct: 510 -EKAMQELSRAARSLRALADFLQSNPESLLRGRGQDPDPRRRPRQ 553
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 68/247 (27%), Gaps = 7/247 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DG + +R S+ GL+ +++ F+GI +G + + +D + + + D LY
Sbjct: 298 DGEAFPIRMRFDQSIRGLAVGAAIDFSGITLGNVTQINMDFDPVSK---RFFALVDATLY 354
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
P + + + + + + I + RA + +
Sbjct: 355 PERLGRVYDE----VREHAIKDGDEAGGRLLGIMIKHGLRAQLRTANLLTGQLYVVLDEF 410
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + I +S
Sbjct: 411 PNVKPVEFKMTTPAMIPTVPGQLDQLQQQVSNIVAKIDKIPFDKIGEDLRTTLASTSKLM 470
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
N + + +N +L + N K+ ++ +R
Sbjct: 471 NRLDKQVAPEAQGVLKQARDSMANLNALLASDASLPVNAEKAMQELSRAARSLRALADFL 530
Query: 275 QEVGQKI 281
Q + +
Sbjct: 531 QSNPESL 537
Score = 43.8 bits (100), Expect = 0.064, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 33/91 (36%), Gaps = 10/91 (10%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+S+ + + V +++ S W+ + +GL + +R+
Sbjct: 23 KSRISWIWLVPVVAALMGLSLVVRTWMQAGPDLSIE--------FNTAEGLEVGKTQLRY 74
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ VG + + + + + + +A + D
Sbjct: 75 KDVNVGTVRSIGFNADR-SKVVVQAELSKDV 104
>gi|254511272|ref|ZP_05123339.1| ABC transporter substrate binding protein [Rhodobacteraceae
bacterium KLH11]
gi|221534983|gb|EEE37971.1| ABC transporter substrate binding protein [Rhodobacteraceae
bacterium KLH11]
Length = 150
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 45/128 (35%), Gaps = 3/128 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
VG V++ + +Q E+ S++G++ + VR G+ +
Sbjct: 7 TEVIVGGVVLACAVAFGVYASQSAGLSQ-ARVGYELGASF-RSLEGVNVGTDVRLAGVKI 64
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + L+ + + + + + + I ++GL G ++E+
Sbjct: 65 GTVTNVTLNPDTYR-ADTRFSVADGILIPDDSAIVISSEGLLGGNFVEVMPGGSPFFFEA 123
Query: 126 QIATERNQ 133
E Q
Sbjct: 124 GDEIEDTQ 131
>gi|33593711|ref|NP_881355.1| hypothetical protein BP2751 [Bordetella pertussis Tohama I]
gi|33563784|emb|CAE43026.1| putative membrane protein [Bordetella pertussis Tohama I]
Length = 557
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/404 (9%), Positives = 107/404 (26%), Gaps = 40/404 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR--PDTPLYPSTTATIRTQ 104
+ L S V F IPVGR++G LD + + + D + ST +
Sbjct: 183 TDLGSLDIGSPVYFRRIPVGRVIGYKLD-DSGRVVNVEVFVDAPNDRFVTDSTRFWNASG 241
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ L + ++ + P +
Sbjct: 242 VDVAVNASGLKVRTQSLVSLAVGGVAFESVSARQGEPVKADTRF---------------- 285
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
++ E+ I +I + + +
Sbjct: 286 --ELYESETAAKANPDDQPFPIRMRFDQSIRGLTVGSPIDFQGITLGEVTRIAIDFDNAK 343
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI--D 282
++ A + + + + S + + + Q +
Sbjct: 344 KRFFAVVDATVYPERIGRVFDEIRARTEASSGSHAAGQLLSIMIKYGLRAQLRTANLLTG 403
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
L + ++ + + + + ++ I I + I ++L
Sbjct: 404 QLYIVLDTFPEAPPVAFVPGDDPVIIPTIPGQLDQLQAQISSIVTKIEKIP-FDQIGTDL 462
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ A+LM++++ L +A+ + R + IN +
Sbjct: 463 RATLASTAKLMNRLDK--------DLAPEARAVLSQARQSLVDINNMLAP--------DS 506
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ + ++++ + + + NP+ ++ GR +
Sbjct: 507 GLPANTERAMQEMSRAARSLRNLADYLQTNPEALLKGRGADPIP 550
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 3/78 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPDT 91
D + +R S+ GL+ S + F GI +G + + +D + ++ A + P+
Sbjct: 299 DDQPFPIRMRFDQSIRGLTVGSPIDFQGITLGEVTRIAIDFDNAKKRFFAVVDATVYPER 358
Query: 92 PLYPSTTATIRTQGLAGI 109
RT+ +G
Sbjct: 359 IGRVFDEIRARTEASSGS 376
Score = 43.4 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+S+ + + + + + + R+ GP + + + +GL + VR+
Sbjct: 25 KSRISWIW-----LVPIVAALAGLSLVVRTIMQAGPEITI---LFDTAEGLEVGKTQVRY 76
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ +G + G+ +++ + + +A + +
Sbjct: 77 KDVNIGVVQGIHFNEDR-SKVVVEAELAKEV 106
>gi|118466668|ref|YP_881727.1| virulence factor Mce [Mycobacterium avium 104]
gi|118167955|gb|ABK68852.1| virulence factor mce family protein [Mycobacterium avium 104]
Length = 439
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/339 (10%), Positives = 92/339 (27%), Gaps = 11/339 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++ I + RS G ++ + GL SV G+PVG+I +
Sbjct: 2 AIALTAVLLGGIVTVVRSAAGVGRTT--VVGYFANSTGLYNGDSVVILGVPVGKIEKIEP 59
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + + A I + L I+L+ + A Q
Sbjct: 60 EPD---RVRITFWLNDKYKVPADVKAAILSPSLVTPRSIQLTPAYTGGPALADHAVIPQQ 116
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSR-----HIQKIIENIEKPLTTTIANIETIST 188
R + + + + I +N+ + +S
Sbjct: 117 RTAVPVEYDDFRQQLEKLTQVLQPTAPGGTSTLGAFINTAADNLRGQGPDIRKTVIELSQ 176
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H + + T + + + + + + + + N++ ++
Sbjct: 177 AISALGDHSNDLFSTVKNLSILVSALHDSSDLLQQLNQNLAEVTGLLANDPNEVANAVRN 236
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS-KMKSKETSAFLENIADS 307
++ V + T+ V Q + L D + NI
Sbjct: 237 LNDVVGDVRGFVAENRDALGTTSDKLASVTQAVTDSLGDVKQLLHTAPTAFQNFLNIYQP 296
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ A + Q + + + + +
Sbjct: 297 AQGTLTGALAFNNFANTIQFLCGAVEAASRLGAKESAKL 335
>gi|330950548|gb|EGH50808.1| PqiB family protein [Pseudomonas syringae Cit 7]
Length = 559
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/416 (6%), Positives = 87/416 (20%), Gaps = 36/416 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + F I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYFRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + + + +I + +
Sbjct: 220 ITTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKPADENAEFKI- 278
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ ++ + V
Sbjct: 279 -----------------------FDDQTTAMAPPDGEPRYIRMRFNQSLRGLTVNAAVDF 315
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + D K I ++ + +K +
Sbjct: 316 LGVNIGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGAAESKLKELGGSGDEEEQSARVLG 375
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F G + + + + + + + +
Sbjct: 376 AFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQ 435
Query: 333 NTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+E +++ + + +S++ +S+ + + T N
Sbjct: 436 AFVEKLSNLPIDQLAGNLNGTLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFA 494
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 495 E--------DSPARQQLGQAMDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
>gi|86159559|ref|YP_466344.1| hypothetical protein Adeh_3138 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85776070|gb|ABC82907.1| Mammalian cell entry related protein [Anaeromyxobacter
dehalogenans 2CP-C]
Length = 322
Score = 77.3 bits (187), Expect = 4e-12, Method: Composition-based stats.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG FV+S + + +L + + + + GL TD+ V+F
Sbjct: 1 MARRFDPRVVGAFVLSAIALGVVAAVYLG-AGRLLQRRVRFVAVFSEDLAGLETDAPVKF 59
Query: 61 NGIPVGRIVGLFL 73
G+PVGR+ + L
Sbjct: 60 RGVPVGRVSSIHL 72
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 50/158 (31%), Gaps = 9/158 (5%)
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
L +D S + +AD S A + + + T + +++
Sbjct: 169 ALQADVSKLLTKLHALDLEGLVADLRRAASSIDRAAARVDAAAAAVPPALGTAQAAVASV 228
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
++ A L DA+ A R T E+ + + +G + S
Sbjct: 229 GEALGDAARAFES--------NLPPLATDARAAAVQLRATLERADGALRDVGALVDPASP 280
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + +LQ + +R+P +V GR
Sbjct: 281 VAW-QLGATLAELQGAARALRHLAEDLDRDPSALVRGR 317
>gi|282866018|ref|ZP_06275066.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
gi|282559057|gb|EFB64611.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
Length = 343
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 44/119 (36%), Gaps = 4/119 (3%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
++ LS ++ G R V GL SVR G+ VG++ + +
Sbjct: 21 ALATTVLALSIADTGVGDTTSYKARFTD-VTGLVVGDSVRIAGVKVGQVESIEVA--DRR 77
Query: 80 HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-KEKKTIFQIATERNQRAMI 137
+ +R L S TA+I+ + G Y++L ++ AT + R
Sbjct: 78 LAEVGFAVRKGRELPASVTASIKYLNMVGQRYVDLGQGAGPVGESFRPGATIPDSRTTP 136
>gi|118463697|ref|YP_884170.1| Mce family protein [Mycobacterium avium 104]
gi|118164984|gb|ABK65881.1| putative Mce family protein [Mycobacterium avium 104]
Length = 335
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
FV++ + + ++ Q + V GL D+ VR G+ VG++ +
Sbjct: 11 FVLASALAAVVFVLIVNVLRQPVAAKTDSYTAEFTDVSGLHVDADVRLRGVRVGKVQSIQ 70
Query: 73 LDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L ++ + ++ + ++ + +T ++ Q L G+ Y
Sbjct: 71 LQRKAGQSIAVVELVLDTHYAVVSTTRLAVKYQALTGLRY 110
>gi|260062562|ref|YP_003195642.1| hypothetical protein RB2501_13264 [Robiginitalea biformata
HTCC2501]
gi|88784129|gb|EAR15299.1| hypothetical protein RB2501_13264 [Robiginitalea biformata
HTCC2501]
Length = 322
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 17/97 (17%), Positives = 35/97 (36%), Gaps = 3/97 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+ VV + +L + +D ++ V GL T +SV NG
Sbjct: 4 SREIKTGIIVVGGILLFILGFSYLKSTPLFDDSKTFYVVY--DHVGGLQTGTSVSINGYT 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
VG + + ++ L + + ++ A +
Sbjct: 62 VGTVNDIRF-KDNSGKLLVTFSVNKNFDFSRNSQAEL 97
>gi|330980816|gb|EGH78919.1| PqiB family protein [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 559
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 29/416 (6%), Positives = 87/416 (20%), Gaps = 36/416 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + F I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYFRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + + + +I + +
Sbjct: 220 ITTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKPADENAEFKI- 278
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ ++ + V
Sbjct: 279 -----------------------FDDQATAMAPPDGEPRYIRMRFNQSLRGLTVNAAVDF 315
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + D K I ++ + +K +
Sbjct: 316 LGVNIGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGAAESKLKELGGSGDEEEQSARVLG 375
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F G + + + + + + + +
Sbjct: 376 AFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQ 435
Query: 333 NTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+E +++ + + +S++ +S+ + + T N
Sbjct: 436 AFVEKLSNLPIDQLAGNLNGTLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFA 494
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 495 E--------DSPARQQLGQAMDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
>gi|66046276|ref|YP_236117.1| PqiB family protein [Pseudomonas syringae pv. syringae B728a]
gi|63256983|gb|AAY38079.1| PqiB family protein [Pseudomonas syringae pv. syringae B728a]
gi|330969875|gb|EGH69941.1| PqiB family protein [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 559
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 30/416 (7%), Positives = 88/416 (21%), Gaps = 36/416 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + F I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYFRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + + + +I + +
Sbjct: 220 ITTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKPADENAEFKI- 278
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
A + ++ + V
Sbjct: 279 -----------------------FDDQTAAMAPPDGEPRYIRMRFNQSLRGLTVNAAVDF 315
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + D K I ++ + +K +
Sbjct: 316 LGVNIGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGAAESKLKELGGSGDEEEQSARVLG 375
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F G + + + + + + + +
Sbjct: 376 AFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQ 435
Query: 333 NTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+E +++ + + +S++ +S+ + + T N
Sbjct: 436 AFVEKLSNLPIDQLAGNLNGTLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFA 494
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 495 E--------DSPARQQLGQAMDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
>gi|311744831|ref|ZP_07718627.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311311948|gb|EFQ81869.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 357
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 41/110 (37%), Gaps = 3/110 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
V + ++ + +N E V G++ VR G+ VGR
Sbjct: 10 ALVKIVAFLVVTGFTTFLLMTILANGLFRSDTEYSAVF-RDVTGVAKGDDVRIAGVAVGR 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + + +L + D PL +T AT++ + L G Y+ LS
Sbjct: 69 VEKVEVI--DGTRALVTFGVDSDRPLTDNTFATMKFRNLVGQRYLALSQG 116
>gi|171915267|ref|ZP_02930737.1| putative ABC transport system substrate-binding protein
[Verrucomicrobium spinosum DSM 4136]
Length = 354
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/137 (18%), Positives = 46/137 (33%), Gaps = 4/137 (2%)
Query: 1 MESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
ME + VGLF+ + + I + P + + + G+ + V
Sbjct: 1 MEERDRKSELLVGLFLFVGMLLLAYLILQFGSVRELFRPTYPLTVEL-ADGTGIREATPV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST-L 117
G VG++ N + + DT + I T GL G ++IE+
Sbjct: 60 MLGGSRVGKVTEKPTLNAAQNGVIISLQLYQDTKIGSDAKFGIGTSGLLGDSFIEIKPSG 119
Query: 118 RKEKKTIFQIATERNQR 134
+ I A + +
Sbjct: 120 KTPATFIEPGAHIKGEV 136
>gi|220904329|ref|YP_002479641.1| Mammalian cell entry related domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868628|gb|ACL48963.1| Mammalian cell entry related domain protein [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 322
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/314 (11%), Positives = 87/314 (27%), Gaps = 4/314 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ Y T+VG FV+ L L + + ++ GSV GLST + V F
Sbjct: 1 MNAQKYRTTVGAFVLGGLSLLALGFIVLGG-GRLFSNDMQYVLYFDGSVSGLSTGAPVVF 59
Query: 61 NGIPVGRIVGLFL---DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+P+G + + L ++ I + + +A I I +
Sbjct: 60 RGVPMGSVTRINLVANTKDSNVTIPVYIRIDEQSFVRARGSAPISESVREEIVRRMVQRG 119
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + T + + + + + + I +Q + +
Sbjct: 120 LRARLQLQSLITGQYRIELDFFPGTPAVFRSGTPDTEIPTIPSPIDTLQTTLAQLPLESM 179
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
S + + + + T + +++ S+ K +
Sbjct: 180 AHALEAILQSLAHSLADDSLGRGLKAFTRTFEEVEDVLKNSSMRQNAESILKKLNTAAST 239
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
Q+ S ++ + +++ T
Sbjct: 240 VEGQMPGTFVTLRAALESMSLAADQLRVVTASAQSLVGRDSPTVNDVRRLIRESIETLRT 299
Query: 298 SAFLENIADSTSNM 311
+ +
Sbjct: 300 IRNFTQMLERNPEA 313
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 65/177 (36%), Gaps = 8/177 (4%)
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
T + L+ + + A L+++ + S S+ + +
Sbjct: 153 PDTEIPTIPSPIDTLQTTLAQLPLESMAHALEAILQSL--AHSLADDSLGRGLKAFTRTF 210
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI 386
+ + + ++ N +K S + + F + A+ + ++++
Sbjct: 211 EEVEDVLKNSSMRQNAESILKKLNTAASTVEG-----QMPGTFVTLRAALESMSLAADQL 265
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
R + + +L +ND++ L+R+ ET+ + ERNP+ ++ GR+
Sbjct: 266 -RVVTASAQSLVGRDSPTVNDVRRLIRESIETLRTIRNFTQMLERNPEALLMGRQGK 321
>gi|28898792|ref|NP_798397.1| paraquat-inducible protein B [Vibrio parahaemolyticus RIMD 2210633]
gi|153839710|ref|ZP_01992377.1| paraquat-inducible protein B [Vibrio parahaemolyticus AQ3810]
gi|260364135|ref|ZP_05776841.1| paraquat-inducible protein B [Vibrio parahaemolyticus K5030]
gi|260877218|ref|ZP_05889573.1| paraquat-inducible protein B [Vibrio parahaemolyticus AN-5034]
gi|260897836|ref|ZP_05906332.1| paraquat-inducible protein B [Vibrio parahaemolyticus Peru-466]
gi|260901535|ref|ZP_05909930.1| paraquat-inducible protein B [Vibrio parahaemolyticus AQ4037]
gi|28807011|dbj|BAC60281.1| paraquat-inducible protein B [Vibrio parahaemolyticus RIMD 2210633]
gi|149746763|gb|EDM57751.1| paraquat-inducible protein B [Vibrio parahaemolyticus AQ3810]
gi|308087627|gb|EFO37322.1| paraquat-inducible protein B [Vibrio parahaemolyticus Peru-466]
gi|308090328|gb|EFO40023.1| paraquat-inducible protein B [Vibrio parahaemolyticus AN-5034]
gi|308110899|gb|EFO48439.1| paraquat-inducible protein B [Vibrio parahaemolyticus AQ4037]
gi|308115196|gb|EFO52736.1| paraquat-inducible protein B [Vibrio parahaemolyticus K5030]
gi|328474649|gb|EGF45454.1| paraquat-inducible protein B [Vibrio parahaemolyticus 10329]
Length = 548
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/402 (9%), Positives = 115/402 (28%), Gaps = 26/402 (6%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTAT 100
I+ L V + G VGR+ D + + +P D+ + T
Sbjct: 161 IVLTHREAGKLGVGDPVIYKGFTVGRVEKTSFDVDTRRALYQLFIFKPYDSLVRTRTKFW 220
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + + +++ + + + +
Sbjct: 221 LNSGLDLQLNAEGFEVKFGSLESLLTGGVTFDSIPGMESGEAL----------------T 264
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
++ +++++ + ++ + + +
Sbjct: 265 KDMTNFRLYDDVKQVREGMYDEYIEFVMLFEESVRGLKRKAPVEYRGLRIGTVMRVPMRL 324
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ ++ + S + + +R T +T +
Sbjct: 325 PTPEEHFSAKRIPVLVRIELGRVYGDVESHSMEMFKEKLKDEFAKGLRGTLKTGNLLTG- 383
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
L D A D MR + ++ + ++ + + +TS
Sbjct: 384 --ALYIDADFYPDDTPYEANTYEGLDVFPTMRGGFAQVQRQVNDFLNKLNNLPMEDTLTS 441
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
LN + + ++ ++ + KD Q R + +++ + + G N
Sbjct: 442 -LNATLKTSERTLASAEKVANSIDKLLSQKDTQEIPADIRQSLQQLQKTLDGYGPN---- 496
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ +++++ +++L++ + F L P +V+G ++
Sbjct: 497 -STMYSEMESTLKELEKVMTEFKPVLKQLNEKPNSLVFGEDE 537
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP------NHSLAKALIR 88
E ++ SV GL + V + G+ +G ++ + + P I
Sbjct: 286 EYIEFVMLFEESVRGLKRKAPVEYRGLRIGTVMRVPMRLPTPEEHFSAKRIPVLVRIE 343
>gi|330875278|gb|EGH09427.1| PqiB family protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
Length = 559
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/416 (7%), Positives = 87/416 (20%), Gaps = 36/416 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + + I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYYRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + I + + T + + I
Sbjct: 220 ITTDTRFWNASGV--------------------DITVGASGVKVNTQSLTSIISGGIAFR 259
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ + E T + + + V
Sbjct: 260 EPNWSPESKPADENAEFKIFEDQTTALAPPDGEPRYIRMRFNQSLRGLAVNASVDFLGVT 319
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ D + + + L + + D+
Sbjct: 320 IGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGAAESKLKELGGAGDE----EEQSARVLG 375
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F G + + + + S + + +
Sbjct: 376 AFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVSFNAKARPLEIPTVPGSFDKLQEQLQ 435
Query: 333 NTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+E ++ + + +S++ S+ + + T N
Sbjct: 436 AFVEKLSKLPIDQLAGNLNGTLSELQKTLKQVNG-SVLPQMRGTLQQAEKTLGTANDSFA 494
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 495 E--------DSPARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
>gi|146343648|ref|YP_001208696.1| ABC transporter [Bradyrhizobium sp. ORS278]
gi|146196454|emb|CAL80481.1| conserved hypothetical protein; putative ABC transporter; putative
signal peptide [Bradyrhizobium sp. ORS278]
Length = 274
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ VG ++ + + + + ++ GS GL V F+G+
Sbjct: 2 RAINLIVGTLTIAAVAAGISGVLIKQKRRVAEQRGTMRVVFDGGSAAGLRKGGPVNFDGV 61
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
G+I+ + L E P +A + P+ TTA I QGL GI I L
Sbjct: 62 QAGQILSINL--ESPRKIVAMITLDKSAPIRKDTTAGIEFQGLTGIAAISLVGGAPTAPP 119
Query: 124 IF 125
+
Sbjct: 120 VP 121
>gi|33597162|ref|NP_884805.1| hypothetical protein BPP2577 [Bordetella parapertussis 12822]
gi|33566613|emb|CAE37871.1| putative membrane protein [Bordetella parapertussis]
Length = 557
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/404 (9%), Positives = 108/404 (26%), Gaps = 40/404 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR--PDTPLYPSTTATIRTQ 104
+ L S V F IPVGR++G LD + + + D + ST +
Sbjct: 183 TDLGSLDIGSPVYFRRIPVGRVIGYKLD-DSGRVVNVEVFVDAPNDRFVTDSTRFWNASG 241
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ L + ++ + P + E+ + ++
Sbjct: 242 VDVAVNASGLKVRTQSLVSLAVGGVAFESVSARQGEPVKADTRFELYESETAAKANPDGQ 301
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
I ++ + + +
Sbjct: 302 PFPIRMRFDQSIRGLTVGS------------------PIDFQGITLGEVTRIAIDFDNAK 343
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI--D 282
++ A + + + + S + + + Q +
Sbjct: 344 KRFFAVVDATVYPERIGRVFDEIRARTEASSGSHAAGQLLSIMIKYGLRAQLRTANLLTG 403
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
L + ++ + + + + ++ I I + I ++L
Sbjct: 404 QLYIVLDTFPEAPPVAFVPGDDPVIIPTIPGQLDQLQAQISSIVTKIEKIP-FDQIGTDL 462
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ A+LM++++ L +A+ + R + IN +
Sbjct: 463 RATLASTAKLMNRLDK--------DLAPEARAVLRQARQSLVDINNMLAP--------DS 506
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ + ++++ + + + NP+ ++ GR +
Sbjct: 507 GLPANTERAMQEMSRAARSLRNLADYLQTNPEALLKGRGADPIP 550
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPDT 91
DG + +R S+ GL+ S + F GI +G + + +D + ++ A + P+
Sbjct: 299 DGQPFPIRMRFDQSIRGLTVGSPIDFQGITLGEVTRIAIDFDNAKKRFFAVVDATVYPER 358
Query: 92 PLYPSTTATIRTQGLAGI 109
RT+ +G
Sbjct: 359 IGRVFDEIRARTEASSGS 376
Score = 43.4 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+S+ + + + + + + R+ GP + + + +GL + VR+
Sbjct: 25 KSRISWIW-----LVPIVAALAGLSLVVRTIMQAGPEITI---LFDTAEGLEVGKTQVRY 76
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ +G + G+ +++ + + +A + +
Sbjct: 77 KDVNIGVVQGIHFNKDR-SKVVVEAELAKEV 106
>gi|159902856|ref|YP_001550200.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9211]
gi|159888032|gb|ABX08246.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9211]
Length = 281
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 34/109 (31%), Gaps = 6/109 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG ++ + I WL + ++ GLS + V F
Sbjct: 1 MRRSYREAIVGFTLLGGVVLLSGIIIWLQGF-RVGRNDWNIVATF-DDASGLSDGTPVTF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAG 108
GI VG + + + A + + L+ A + + G
Sbjct: 59 RGIKVGSVEKISF---NTRNVKANLRLNTNKLLLFKPVYAKVLASSVLG 104
>gi|28870349|ref|NP_792968.1| PqiB family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969825|ref|ZP_03397959.1| PqiB family protein [Pseudomonas syringae pv. tomato T1]
gi|301385011|ref|ZP_07233429.1| PqiB family protein [Pseudomonas syringae pv. tomato Max13]
gi|302060459|ref|ZP_07252000.1| PqiB family protein [Pseudomonas syringae pv. tomato K40]
gi|302133282|ref|ZP_07259272.1| PqiB family protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28853596|gb|AAO56663.1| PqiB family protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925373|gb|EEB58934.1| PqiB family protein [Pseudomonas syringae pv. tomato T1]
gi|331016582|gb|EGH96638.1| PqiB family protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 559
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 32/416 (7%), Positives = 87/416 (20%), Gaps = 36/416 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + + I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYYRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + I + + T + + I
Sbjct: 220 ITTDTRFWNASGV--------------------DITVGASGVKVNTQSLTSILSGGIAFR 259
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ + E T + + + V
Sbjct: 260 EPNWSPDSKPADENAEFKIFEDQTTALAPPDGEPRYIRMRFNQSLRGLAVNASVDFLGVT 319
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ D + + + L + + D+
Sbjct: 320 IGKVVSVDLDYDPATKTFPGIVGAVIYPKRLGAAESKLKELGGAGDE----EEQSARVLG 375
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
F G + + + + S + + +
Sbjct: 376 AFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVSFNAKARPLEIPTVPGSFDKLQEQLQ 435
Query: 333 NTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+E ++ + + +S++ S+ + + T N
Sbjct: 436 AFVEKLSKLPIDQLAGNLNGTLSELQKTLKQVNG-SVLPQMRGTLQQAEKTLGTANDSFA 494
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 495 E--------DSPARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
>gi|284043087|ref|YP_003393427.1| hypothetical protein Cwoe_1624 [Conexibacter woesei DSM 14684]
gi|283947308|gb|ADB50052.1| Mammalian cell entry related domain protein [Conexibacter woesei
DSM 14684]
Length = 483
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/384 (11%), Positives = 118/384 (30%), Gaps = 14/384 (3%)
Query: 1 MESK-----NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
M + +G V ++ + F Y + + P ++ ++P S + L T
Sbjct: 1 MNRRSTSVAANPVLIGAATVLVVIVAVFLAYN-ANNGLPFVPTYQIYAQVPDSAN-LVTG 58
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT---PLYPSTTATIRTQGLAGITYI 112
+ VR G VG I + A+ ++ DT PL +T +R + G+ Y+
Sbjct: 59 NEVRIGGDRVGIISAIDPVVHDNGRVTARLTLKLDTNVKPLPTDSTFIVRPRSAVGLKYL 118
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
E++ R + + + AT +A + + + + ++ +
Sbjct: 119 EVTRGRSREG-LDEGATTSLAQATPRPVEIDEFFNMFDEKTRKANQANLKIFGDALAGRG 177
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ ++ + D + + + + + L + +
Sbjct: 178 IDLNEAIVELDPLTRNLIPVMRNLNDPRTGFGEFFGALQRTASIVAPVAEQQGQLFRNLS 237
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+Q S + + + I+ R+ +++ +
Sbjct: 238 TTFDAFAAISRPYLQESISGGPPAMEAAISAFPFQRKFLANSAGFFRELQPGAQALRTSA 297
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + + ++ + A + + Q + +N D +
Sbjct: 298 PLLAEAFTVGTRTITRASALNERLARQMRSLQAFAEDPQVPLGIKGLNNTVDV---LSPT 354
Query: 353 MSKINNISALKENNSLFKDAQRAM 376
++ ++ I LF + Q ++
Sbjct: 355 IANLSAIQTQCNYIGLFLNNQASV 378
>gi|254487146|ref|ZP_05100351.1| ABC transporter substrate binding protein [Roseobacter sp. GAI101]
gi|214044015|gb|EEB84653.1| ABC transporter substrate binding protein [Roseobacter sp. GAI101]
Length = 149
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 41/124 (33%), Gaps = 7/124 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M VG V+ + + ++ G + S++G+ + +
Sbjct: 1 MREDLPEIMVGGVVL---AAAIGFALYAGQAAGLTGARDTYALQASF-RSLEGIDVGTDL 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ +G++ + L+ I + + + ++GL G Y+E+
Sbjct: 57 RLAGVKIGKVTDVTLNPTTYRADTV-VSIDDGIEIPDDSALVVSSEGLLGGNYMEIVPGG 115
Query: 119 KEKK 122
Sbjct: 116 SPFY 119
>gi|326331731|ref|ZP_08198019.1| putative secreted protein [Nocardioidaceae bacterium Broad-1]
gi|325950530|gb|EGD42582.1| putative secreted protein [Nocardioidaceae bacterium Broad-1]
Length = 425
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 4/138 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M V V++ + + S +L ++ G +V I +P S GL S V +
Sbjct: 1 MTRSVRNKLVIFLVLAAVGIFYVSAAYLGVVDRVLGRHVDVSIDLPAS-GGLYVGSEVNY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI +GR+ + + E A + P T + + G YI
Sbjct: 60 RGISIGRVASMTVTDEG---VRAGLQLDPGTEVPKDAKVEVHNLSAVGEQYINFIPESAS 116
Query: 121 KKTIFQIATERNQRAMIT 138
+ + +
Sbjct: 117 GPYLAEGDVVTAGPESMP 134
>gi|302340501|ref|YP_003805707.1| hypothetical protein Spirs_4029 [Spirochaeta smaragdinae DSM 11293]
gi|301637686|gb|ADK83113.1| Mammalian cell entry related domain protein [Spirochaeta
smaragdinae DSM 11293]
Length = 470
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 35/336 (10%), Positives = 105/336 (31%), Gaps = 11/336 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ +GLFV + + +Y + D ++I GL +S VR +G+
Sbjct: 2 SRLLKIGLFV--AITGTVSIVYIMQTVEAIDADETKLIHAYMDDASGLLPESLVRLSGVN 59
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G++ + L+ + + + P+Y + + G + + + +
Sbjct: 60 IGKVTKIVLE---DGKAKVTMEVNAEVPIYQDARVVKKMDSILGNSIVSIVPG-----NM 111
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
N + + +N + + ++++ + + N I
Sbjct: 112 NTGIIPPNGVVRYVESSTAMNKAFESTQKVAEELEQLLAEFRTFMNNSGYSEMNDILV-S 170
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
STV ++ + N ++ + I + ++
Sbjct: 171 AKSTVAVTGDLVQQNLLILRSAMTDIAAVAERLNAQSEAESDNISTILDHTARLTERLDT 230
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + N ++ ++ + + ++ + + +KID + + +E + I
Sbjct: 231 MLAENDRNLEQAVAEMRKSAETLTAVLESTRSIARKIDDGEGNLGKLVNDEELYHRIVGI 290
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
++ S + + + + +E
Sbjct: 291 TENVEGFVDSTVGMNVELGLQGDYMVQASGMETRAE 326
>gi|300783700|ref|YP_003763991.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793214|gb|ADJ43589.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 334
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 44/130 (33%), Gaps = 4/130 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ + + ++ +S +N G + L+ VR +G+ VG++
Sbjct: 8 LIKSLIFIAVTALATTLLAISITNSGVGATERYTAKFLD-ATSLNVGDDVRISGVRVGQV 66
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL-RKEKKTIFQI 127
LD N ++ + L A I+ + + G Y+ L ++ + Q
Sbjct: 67 ES--LDIGDRNRAVVGFSLDQGRRLPADVRAVIKYRNMVGQRYVALERGTTGTREQLPQG 124
Query: 128 ATERNQRAMI 137
A R
Sbjct: 125 AEIPLDRTTP 134
>gi|154491705|ref|ZP_02031331.1| hypothetical protein PARMER_01316 [Parabacteroides merdae ATCC
43184]
gi|154087946|gb|EDN86991.1| hypothetical protein PARMER_01316 [Parabacteroides merdae ATCC
43184]
Length = 294
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 49/294 (16%), Positives = 89/294 (30%), Gaps = 9/294 (3%)
Query: 1 MES-KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M++ +GL + L + I +L N + V+ +V G++ S V
Sbjct: 1 MKNVFTKEAKIGLVSIVSLALLYLGINYLKGINLFKPTNHYVVAC--TNVKGVTVSSPVF 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G VG + + D + + + + + TI L G
Sbjct: 59 VEGFKVGLVREIVYDYDAVDKISIDISLEDHMKINKGSYITIVNSFLGGGELHIHLNKYV 118
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ E R S + E KI +Q ++ + +
Sbjct: 119 DDYLKPGDTIE--GRMESDMMQSVQEKILPQVELLLPKIDSILGGLQTLVNHPALAQSLN 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
T S +++ M + V SD K D+ T L K+ A + V
Sbjct: 177 NIETTTNSLAVSSRQ---LNQMLSKDVPGIMSDLKVITGNFADVSTDLKKLDLATTVNAV 233
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
N L+N++ + + + ++D R LL D K
Sbjct: 234 NATLDNVEQMTRKLNSKDNSMGLLLND-RALYDNLNSTADNASKLLLDLRQNPK 286
>gi|294651660|ref|ZP_06728963.1| toluene tolerance efflux ABC superfamily ATP binding cassette
transporter, substrate-binding protein [Acinetobacter
haemolyticus ATCC 19194]
gi|292822439|gb|EFF81339.1| toluene tolerance efflux ABC superfamily ATP binding cassette
transporter, substrate-binding protein [Acinetobacter
haemolyticus ATCC 19194]
Length = 220
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S+ +VG+FV+ FF +S + + + +++GL T + V
Sbjct: 1 MKSRTSELAVGIFVIIFGIALFFLAMKVSGLVGTNLRDSYSMTAQFDNINGLKTRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + K +
Sbjct: 61 SGVTIGRVDSITLDPVT-RLATVKFDLDGKL 90
>gi|33601006|ref|NP_888566.1| hypothetical protein BB2022 [Bordetella bronchiseptica RB50]
gi|33575441|emb|CAE32519.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 557
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 39/404 (9%), Positives = 108/404 (26%), Gaps = 40/404 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR--PDTPLYPSTTATIRTQ 104
+ L S V F IPVGR++G LD + + + D + ST +
Sbjct: 183 TDLGSLDIGSPVYFRRIPVGRVIGYKLD-DSGRVVNVEVFVDAPNDRFVTDSTRFWNASG 241
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ L + ++ + P + E+ + ++
Sbjct: 242 VDVAVNASGLKVRTQSLVSLAVGGVAFESVSARQGEPVKADTRFELYESETAAKANPDGQ 301
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
I ++ + + +
Sbjct: 302 PFPIRMRFDQSIRGLTVGS------------------PIDFQGITLGEVTRIAIDFDNAK 343
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI--D 282
++ A + + + + S + + + Q +
Sbjct: 344 KRFFAVVDATVYPERIGRVFDEIRARTEASSGSHAAGQLLSIMVKYGLRAQLRTANLLTG 403
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
L + ++ + + + + ++ I I + I ++L
Sbjct: 404 QLYIVLDTFPEAPPVAFVPGDDPVIIPTIPGQLDQLQAQISSIVTKIEKIP-FDQIGTDL 462
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ A+LM++++ L +A+ + R + IN +
Sbjct: 463 RATLASTAKLMNRLDK--------DLAPEARAVLRQARQSLVDINNMLAP--------DS 506
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ + ++++ + + + NP+ ++ GR +
Sbjct: 507 GLPANTERAMQEMSRAARSLRNLADYLQTNPEALLKGRGADPIP 550
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPDT 91
DG + +R S+ GL+ S + F GI +G + + +D + ++ A + P+
Sbjct: 299 DGQPFPIRMRFDQSIRGLTVGSPIDFQGITLGEVTRIAIDFDNAKKRFFAVVDATVYPER 358
Query: 92 PLYPSTTATIRTQGLAGI 109
RT+ +G
Sbjct: 359 IGRVFDEIRARTEASSGS 376
Score = 43.4 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+S+ + + + + + + R+ GP + + + +GL + VR+
Sbjct: 25 KSRISWIW-----LVPIVAALAGLSLVVRTIMQAGPEITI---LFDTAEGLEVGKTQVRY 76
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ +G + G+ +++ + + +A + +
Sbjct: 77 KDVNIGVVQGIHFNKDR-SKVVVEAELAKEV 106
>gi|226953847|ref|ZP_03824311.1| toluene tolerance efflux ABC transporter periplasmic
substrate-binding protein [Acinetobacter sp. ATCC
27244]
gi|226835407|gb|EEH67790.1| toluene tolerance efflux ABC transporter periplasmic
substrate-binding protein [Acinetobacter sp. ATCC
27244]
Length = 220
Score = 77.3 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/91 (20%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S+ +VG+FV+ FF +S + + + +++GL T + V
Sbjct: 1 MKSRTSELAVGIFVIIFGIALFFLAMKVSGLVGTNLRDSYSMTAQFDNINGLKTRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ +GR+ + LD + K +
Sbjct: 61 SGVTIGRVDSITLDPVT-RLATVKFDLDGKL 90
>gi|227327334|ref|ZP_03831358.1| putative paraquat-inducible protein [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 547
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 37/398 (9%), Positives = 102/398 (25%), Gaps = 33/398 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L + S V + IPVGR+ L+++ + + + D P
Sbjct: 167 DDLGSLDSGSPVYYRRIPVGRVASYQLNRDGHS---VQLQVFIDAP-------------- 209
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y T + + T + ++ + D+ +
Sbjct: 210 ----YDRFVTPNTRFWNASGVDLSVDANGFRLRTQTLAAVMAGGIAFSTPDLDDTIARPE 265
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + ++ + + +
Sbjct: 266 PLTTYKLASDRESALSPPDGPP-----------ILFKLRFDRSLHGLEIGAPVEFSSVKI 314
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
A+D K + + D + Q E + +
Sbjct: 315 GYVTAIALDYSKTGYRFPTVVSIEVFPNRLGDVLDRLPKQATSLEQQTAEFTRDLVEHGL 374
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ T ++ ++ + S +
Sbjct: 375 RAQVAPSNLLTGQLYISLDFVPEAAKTPFDLNARPLVLPTVDGGFDRLQTQMASIIGKID 434
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + + N + ++ N +L + + + +++ + + L+ S L
Sbjct: 435 NLPLDAIGRNMNTTLVEANKALRQVNGQTLPEANRLMKQMQQATRRAQDVLEEDSPLQLG 494
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
I ++++Q T+ +R+P+ ++ GR S
Sbjct: 495 -ITQSLQEIQRTLRALRSLAEQIDRHPESLLQGRPSDS 531
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKA 85
S + DGP +R S+ GL + V F+ + +G + + LD + ++
Sbjct: 278 SALSPPDGPPILFKLRFDRSLHGLEIGAPVEFSSVKIGYVTAIALDYSKTGYRFPTVVSI 337
Query: 86 LIRPD 90
+ P+
Sbjct: 338 EVFPN 342
>gi|108797260|ref|YP_637457.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866345|ref|YP_936297.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126432884|ref|YP_001068575.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|108767679|gb|ABG06401.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692434|gb|ABL89507.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126232684|gb|ABN96084.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 512
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 52/132 (39%), Gaps = 5/132 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + +F V+ + I+ +L V + +PG+ GL S+V
Sbjct: 1 MLTRFVRTQLIIFTVTAVVAMGVMIFGYLQAPTLLGIGRMTVTVELPGT-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VG++ + ++ ++A + + + A +R+ G Y++L
Sbjct: 60 YRGVEVGKVTDVRATRQG---AVATLSLGTNQDIPADLHAAVRSVSAVGEQYVDLQPRTG 116
Query: 120 EKKTIFQIATER 131
+ +
Sbjct: 117 SAPYLHDGSVIG 128
>gi|27363499|ref|NP_759027.1| putative ABC transport system periplasmic substrate-binding protein
[Vibrio vulnificus CMCP6]
gi|27359615|gb|AAO08554.1| Possible ABC transport system periplasmic substrate-binding protein
[Vibrio vulnificus CMCP6]
Length = 323
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/322 (12%), Positives = 90/322 (27%), Gaps = 11/322 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +GLFVVS L F ++ L P + SV GL + VRF
Sbjct: 1 MDDSKGSYKLGLFVVSALISLFIVLFILGG-RSLFEPKIIIETYFDESVSGLDVGAPVRF 59
Query: 61 NGIPVGRIVGLFLD----------QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
GI G +V + L + ++ + ++ I I G+
Sbjct: 60 RGITAGEVVAIELSDALYESAVPRENRKSYVVVRSEINGTKSTAEEWNRNIEISIERGLR 119
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
++ + T+ + P + +
Sbjct: 120 ATTQLAGITGQQYLSFDYTQADVELNFDWDPDYPYVPSTKNSTGKIVSGIQRLISRLDEA 179
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+I ++ +ET++ + T + + K ++D +
Sbjct: 180 DINTLVSNINILLETLNKSIGLVDVEALNAQLLTLLINTNQMVKGVDGVVSDPEVKVIIS 239
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
A Q +N L + + + + + V + + + + S
Sbjct: 240 SIAQISQSLNSSLSDEGDINTLIKDLDRAAVRLDVIMADNQPEINYVMKDLRATVENLKS 299
Query: 291 KMKSKETSAFLENIADSTSNMR 312
++ + + ++
Sbjct: 300 FSETLKNQPSSIIFSSEPQKLK 321
>gi|330448138|ref|ZP_08311786.1| mce related family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492329|dbj|GAA06283.1| mce related family protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 547
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 31/406 (7%), Positives = 102/406 (25%), Gaps = 31/406 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ LS V ++G VGR+ D ++ +
Sbjct: 161 VVLTSHEAGKLSVGDPVLYDGFTVGRVEKTSFDINSKQA-------NYQLFIFQPYDRLV 213
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
RT + + E + + E + +
Sbjct: 214 RTTSNFIMKSGMNVQMGAEGFNVKIGSLES---------LITGGVTFKTPSDDQGFVQKK 264
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ ++++ + +I + + +
Sbjct: 265 QLKHYRLFDSVQDYHEKMYDKHINFVMLFKESIRGLKAGAPIEYRGIQIGSVQKVPLRLP 324
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + N ++ +R T +T + +
Sbjct: 325 TSSEGFTSDQIPVLVRIDLGRVYNNLDEGTLDDLRANFEEEFKSGLRATLKTGNLLTGAL 384
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ---KIISTINTIENI 338
+ + K ++ + + + + + + T+N++
Sbjct: 385 YIGTDVYKGEKPEKPLKYDGYDVFPTKEGDLAEVQKQISMLLNKFNKLPVEDTLNSMTAT 444
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + + ++ + + K+ +L D + ++ + T +
Sbjct: 445 LKASEKTMKSAERVTQDLDRLLSQKDTQTLPADIKASLKEIQTTLNGFSPNAAP------ 498
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++Q + + ++ + L P +V+G EK
Sbjct: 499 ------YQNLQGALAQFEQVMTELQPVLRQLNEKPNSLVFGDEKAK 538
Score = 49.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 63/247 (25%), Gaps = 19/247 (7%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------DQEYPNHSLAKALIRPD 90
++ S+ GL + + + GI +G + + L + + I
Sbjct: 285 KHINFVMLFKESIRGLKAGAPIEYRGIQIGSVQKVPLRLPTSSEGFTSDQIPVLVRIDLG 344
Query: 91 T-----------PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + ++ A + L T T + +
Sbjct: 345 RVYNNLDEGTLDDLRANFEEEFKSGLRATLKTGNLLTGALYIGTDVYKGEKPEKPLKYDG 404
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
AE + ++ + +E+ +T T+ E +D+
Sbjct: 405 YDVFPTKEGDLAEVQKQISMLLNKFNKLPVEDTLNSMTATLKASEKTMKSAERVTQDLDR 464
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ +D K + I + A Q + L + Q
Sbjct: 465 LLSQKDTQTLPADIKASLKEIQTTLNGFSP--NAAPYQNLQGALAQFEQVMTELQPVLRQ 522
Query: 260 VINTVHD 266
+ +
Sbjct: 523 LNEKPNS 529
>gi|303245889|ref|ZP_07332171.1| Mammalian cell entry related domain protein [Desulfovibrio
fructosovorans JJ]
gi|302492672|gb|EFL52540.1| Mammalian cell entry related domain protein [Desulfovibrio
fructosovorans JJ]
Length = 353
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 4/90 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K T +GLFV+ L +I L S P I+ P SV GL + V F
Sbjct: 18 MSAKANKTLIGLFVLGALALGLGAIVALG-SGTLFTPKLRCIMFFPNSVSGLEVGAPVLF 76
Query: 61 NGIPVGRIVGLFLDQEY---PNHSLAKALI 87
G+P+G + G+ + + + I
Sbjct: 77 RGVPLGTVKGIRILADPEHLKFYIPVVVEI 106
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/168 (8%), Positives = 53/168 (31%), Gaps = 19/168 (11%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
QE+ ++ ++ + + S + I + ++ + + A++ + ++
Sbjct: 200 PLQELVDRLIGAVTGIEALVNSPQVKRMPAKIDTALTSATTMLEAVKSQVNPLAHMLEIT 259
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
S + + + ++A S + R + + +
Sbjct: 260 LD---------AYSGLARNVDRRADGLAAAA--ISAMGSFDATLKDARGALGNFQKIVNA 308
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ D+ + ++ + + ER+P+ ++ G+
Sbjct: 309 NSPTVT--------DLNRALSEIARAARSIRELADFLERHPEALIQGK 348
>gi|163856969|ref|YP_001631267.1| hypothetical protein Bpet2657 [Bordetella petrii DSM 12804]
gi|163260697|emb|CAP42999.1| putative membrane protein [Bordetella petrii]
Length = 550
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/399 (12%), Positives = 106/399 (26%), Gaps = 34/399 (8%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L S V F I VGR++G LD E N + I T +
Sbjct: 181 DLGSLDIGSPVYFRRINVGRVIGYELD-ESGNAVNVEVFIDS----PNDKFVTRGARFWN 235
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
K + + + S++
Sbjct: 236 ASGVDLSVDGNGLKLHTQSLVSLALGGVAFAPINLNDSGAAEAGSEFQLYASETDAKANP 295
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + + + + V S+ + L
Sbjct: 296 DGDPVPIRMRFDQSVRGLSVGATIDFQGIALGEVTRITVDFDSNKKRFFAMVDASLYPER 355
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
V + + S + + H +R +T + ++ +L+
Sbjct: 356 LG--------SVYDRVHERALESGDDTEGKLLASMIKHGLRAQLRTANLLTGQLYIVLAH 407
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
F + I N+ I I D+ KI + I +L +
Sbjct: 408 FPKADPVEFHITDPVVIPTIPGNLEQLQQQITNIVDRIDKI-----PFDQIGRDLRTTLS 462
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ LMS ++ L +A+ + R + + IN+ + + N
Sbjct: 463 STSRLMSSLDKT--------LAPEARETLRAARKSIDNINQLLANDAALPANA------- 507
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ +++L + + NP+ ++ GR +
Sbjct: 508 -ERAMQELARAARSLRTLADYLQANPEALIRGRGDDPLP 545
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 70/253 (27%), Gaps = 7/253 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DG + +R SV GLS +++ F GI +G + + +D + + D LY
Sbjct: 296 DGDPVPIRMRFDQSVRGLSVGATIDFQGIALGEVTRITVDFDSNKK---RFFAMVDASLY 352
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
P ++ + L + + + + RA + +
Sbjct: 353 PERLGSVYDRVHERA----LESGDDTEGKLLASMIKHGLRAQLRTANLLTGQLYIVLAHF 408
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
K ++ + T + I +S
Sbjct: 409 PKADPVEFHITDPVVIPTIPGNLEQLQQQITNIVDRIDKIPFDQIGRDLRTTLSSTSRLM 468
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
++ + + +NQ+L N N ++ ++ +R
Sbjct: 469 SSLDKTLAPEARETLRAARKSIDNINQLLANDAALPANAERAMQELARAARSLRTLADYL 528
Query: 275 QEVGQKIDHLLSD 287
Q + + D
Sbjct: 529 QANPEALIRGRGD 541
Score = 44.5 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 32/90 (35%), Gaps = 10/90 (11%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
+ + L + L + + E+ I+ + +G+ + VR+
Sbjct: 24 RRISWIW--LVPIVALLAGLSLVV-----RTWMQTGPEISIQF-NTAEGIEVGKTQVRYK 75
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ VG + + + + + + +A + D
Sbjct: 76 DVVVGTVHSIRFN-DDRSKVIVQAELVKDA 104
>gi|225012975|ref|ZP_03703392.1| Mammalian cell entry related domain protein [Flavobacteria
bacterium MS024-2A]
gi|225002874|gb|EEG40853.1| Mammalian cell entry related domain protein [Flavobacteria
bacterium MS024-2A]
Length = 311
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/294 (13%), Positives = 86/294 (29%), Gaps = 9/294 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + V+ L F +L ++ +D + + V+GL + V NG
Sbjct: 4 SREIKTAILVLGCLGTFIFGFSYLKGTSLFDNDLVLHSVY--QDVEGLVVGAKVTINGYS 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + D E +R D + A + GL G I + + TI
Sbjct: 62 VGKVKNIDFD-ENYQKIKVTYSLRKDLSFSSQSVAQLYEAGLIGGKAIAILPVYDSGVTI 120
Query: 125 FQI-----ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
A + ++ + + I ++ + ++ L
Sbjct: 121 KNGDNLPSAVKPGLTELVNQQIAPLQDKIEGLLTSADSLFAGVSNVLNYKSQENLKLALN 180
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + + T + L SL K+ ++ +
Sbjct: 181 GLTESISNINSLSKSMSRIVNSNELVFNSTMEHVGATSKNLAQLTDSLSKIEFGTTMKNM 240
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
++ +N + V ++D + ++ LL+D K
Sbjct: 241 EVASNQLKTILSNLEQGEGTVGKLLND-DGLYNELLHSSESLEALLTDLKDNPK 293
>gi|213618603|ref|ZP_03372429.1| possible exported protein [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
Length = 186
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++K VG+F++ L + F + + ++ GL S VR
Sbjct: 5 KTKKNEIWVGVFLLVALLAALFVCLKAANVTSMRTEPTYKVYATFDNIGGLKVRSPVRIG 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + LD + I + +++ +IRT GL G Y+ L+ ++
Sbjct: 65 GVVVGRVEDISLDPKTY-LPRVTLDIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFED 123
Query: 121 KKTIFQIATERNQRAMITATPSGINY 146
+ I + + + +
Sbjct: 124 PELGTSILKDGSTIQDTKSAMVLEDM 149
>gi|183980213|ref|YP_001848504.1| MCE-family protein Mce6C [Mycobacterium marinum M]
gi|183173539|gb|ACC38649.1| MCE-family protein Mce6C [Mycobacterium marinum M]
Length = 348
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 82/290 (28%), Gaps = 15/290 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T +G +S+ ++ + ++ + L D+ V G+PV
Sbjct: 19 NKTWLGFVGLSLAVVLIGALLLVKQAGI---GYRRYTAEFLQAAS-LQPDNVVSVAGVPV 74
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G ++ + L + H A+ ++ + L T A I+ + G YI+L
Sbjct: 75 GNVISVRLAGD---HVEARLRVKDNIALGRDTRAAIKITTIFGSRYIDLHP--------T 123
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
Q + T + + A++T I + + + L
Sbjct: 124 GAGVPPGQTIDLAHTEVPYDLQAALADSTRTFEQVDGDRIASSLTVLGQALNGLPDVFPQ 183
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ S I + S+ + + +
Sbjct: 184 ALENVRALSSVISQRRDQLGTLLKSTQNVTDILRRQQSDLGSMIRQGQDLIGEFVAHSAA 243
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + V D R + + +++ L++ + ++
Sbjct: 244 FHAMMQALTQVVGSLRTIVVDDRAALEDVVQTMEQLSAKLAEQDALFRNL 293
>gi|56416420|ref|YP_153494.1| hypothetical protein AM074 [Anaplasma marginale str. St. Maries]
gi|254994651|ref|ZP_05276841.1| Conserved family protein [Anaplasma marginale str. Mississippi]
gi|255002759|ref|ZP_05277723.1| Conserved family protein [Anaplasma marginale str. Puerto Rico]
gi|255003891|ref|ZP_05278692.1| Conserved family protein [Anaplasma marginale str. Virginia]
gi|56387652|gb|AAV86239.1| hypothetical protein AM074 [Anaplasma marginale str. St. Maries]
Length = 151
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 4/113 (3%)
Query: 6 YYTSVGLFVVSILFFSFF-SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG+ V + + LS Q+ + VDGL S VR +G+
Sbjct: 7 TEVVVGILVSAAVVALGAHVTNRLSHEMQFYKGCHTIHAYFTD-VDGLRVGSEVRVSGVN 65
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
VG + L LDQ + K ++ L ++AT+ L G Y+++
Sbjct: 66 VGSVTALHLDQNNMP--VVKMCVQKGVSLPVDSSATVTYADLLGKKYVDIMPG 116
>gi|183980448|ref|YP_001848739.1| MCE-family protein Mce1F [Mycobacterium marinum M]
gi|183173774|gb|ACC38884.1| MCE-family protein Mce1F [Mycobacterium marinum M]
Length = 517
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 79/257 (30%), Gaps = 4/257 (1%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+Y+L + +P S GL ++V + GI +G++ G+ A
Sbjct: 25 GVYYLQIPALLGVGRYPLKAELPAS-GGLYPTANVTYRGITIGKVTGVEPTATG---VEA 80
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
I + +A + + G Y++L + K + T P+
Sbjct: 81 TMSIDSRYKIPVDASANVHSVSAVGEQYLDLVSTGAPAKFLSPGQTITKGTVPSEIGPAL 140
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ KI + + + L + + I I+ ++ ++
Sbjct: 141 DTANRGLEVLPADKIPVLLDETAQAVGGLGPALQRLVDATQAIVGDFHTQINDVNDIIQN 200
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+ S + + ++ A Q V IL +++ V ++
Sbjct: 201 SGPILDSQVNSGDAISRWAHNLNVLATQTAERDQNVKSILTQAAPTADQLNSVFSDVRDS 260
Query: 264 VHDVRETTQTFQEVGQK 280
+ + ++ ++
Sbjct: 261 LPQTLANLEVVFDLLKR 277
>gi|118616800|ref|YP_905132.1| MCE-family protein Mce1F [Mycobacterium ulcerans Agy99]
gi|118568910|gb|ABL03661.1| MCE-family protein Mce1F [Mycobacterium ulcerans Agy99]
Length = 517
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 79/257 (30%), Gaps = 4/257 (1%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+Y+L + +P S GL ++V + GI +G++ G+ A
Sbjct: 25 GVYYLQIPALLGVGRYPLKAELPAS-GGLYPTANVTYRGITIGKVTGVEPTATG---VEA 80
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
I + +A + + G Y++L + K + T P+
Sbjct: 81 TMSIDSRYKIPVDASANVHSVSAVGEQYLDLVSTGAPAKFLSPGQTITKGTVPSEIGPAL 140
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ KI + + + L + + I I+ ++ ++
Sbjct: 141 DTANRGLEVLPADKIPVLLDETAQAVGGLGPALQRLVDATQAIVGDFHTQINDVNDIIQN 200
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+ S + + ++ A Q V IL +++ V ++
Sbjct: 201 SGPILDSQVNSGDAISRWAHNLNVLATQTAERDQNVKSILTQAAPTADQLNSVFSDVRDS 260
Query: 264 VHDVRETTQTFQEVGQK 280
+ + ++ ++
Sbjct: 261 LPQTLANLEVVFDLLKR 277
>gi|294632692|ref|ZP_06711251.1| secreted protein [Streptomyces sp. e14]
gi|292830473|gb|EFF88823.1| secreted protein [Streptomyces sp. e14]
Length = 755
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 28/139 (20%), Positives = 50/139 (35%), Gaps = 7/139 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F++ + F + ++ G V +R+P S GL T S V
Sbjct: 1 MITLAVRLKNLAFLLIAVLVLGFVGIRYADLGRFVGVADYYTVDVRLP-STGGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + +A+ I+ P + T A + G YI+L
Sbjct: 60 TYRGVSVGRVGPIDLTGDG---VVAELRIKKSAPHIPADTRAVVAGLSAVGEQYIDLRPQ 116
Query: 118 RKEKKTIFQIATERNQRAM 136
+ + Q
Sbjct: 117 SDTGPYLADGSRIEQQDTQ 135
>gi|240173398|ref|ZP_04752056.1| MCE-family protein Mce3F_1 [Mycobacterium kansasii ATCC 12478]
Length = 416
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 6/133 (4%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
S+ + +FV+ L I+ ++ + V +++P GL +V +
Sbjct: 5 SRRILVQLAIFVIVALVGGAVMIFNYIQLPAMFGIGRYRVTVQLPQ-AAGLYPSGNVTYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A + + A + +Q G Y+ L R+
Sbjct: 64 GTEVGRVESVRL---TDTGVAAVLSLNSGVDIPSDVDAQVHSQSAVGEQYVTLLPRRE-S 119
Query: 122 KTIFQIATERNQR 134
+ +R
Sbjct: 120 PPLKDGDVIPAER 132
>gi|291009382|ref|ZP_06567355.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 331
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 26/113 (23%), Positives = 37/113 (32%), Gaps = 10/113 (8%)
Query: 1 ME--SKNYYTSVGLFVVSILFF-SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M+ + +VG VV L + S G G GL
Sbjct: 1 MKPFRQRNPVTVG--VVGALVMTLIGLGTFFSDELPAIGGGTTYTAEF-GEAAGLKPGDE 57
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VR G+ VG + + LD + D L T+A+IR + L G
Sbjct: 58 VRVAGVKVGEVRDVALDG---ARVRVAFRV-RDAWLGDRTSASIRIKTLLGQK 106
>gi|41406665|ref|NP_959501.1| hypothetical protein MAP0567 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395014|gb|AAS02884.1| hypothetical protein MAP_0567 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 475
Score = 76.9 bits (186), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 77/283 (27%), Gaps = 12/283 (4%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++++ +Y L+ + I+ S GL VR G+PVG I +
Sbjct: 16 IIALVAVLVGGVYVLTSQAKTRK-----IVGYFTSAVGLYPGDQVRVLGVPVGTIDTIDP 70
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ D + A I + L +I+L+ + A+
Sbjct: 71 RPTD---VKITMSVSQDVKVPKDAKAIIMSPNLVAARFIQLTPAYTGGPALADGASIGLD 127
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R A P + + + ++ ++ +Q + T +
Sbjct: 128 RT---AVPVEWDEVKQSLTQLAVQLGPTAGSMQGPLGAAINQAADTFDDKGESFHSALRE 184
Query: 194 ISHIDKMMHTTQ-VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+S + ++ + + + ++ +
Sbjct: 185 LSQAAGRLGDSRGDIFGTVKNLQILVNALSSSNEQIVQFAGNVASVSQVLADSSRHLDTT 244
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + E T + ++ S + +
Sbjct: 245 LGTLNKALSDIRGFLHENNSTIVDTVNNLNDFAKTLSDQSDNI 287
>gi|120403838|ref|YP_953667.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956656|gb|ABM13661.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 491
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 34/350 (9%), Positives = 85/350 (24%), Gaps = 16/350 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
V V + S +Y + P I+ S + VR G+
Sbjct: 11 ARALLVVALTVLAVAGSGVLVY-----QHFFSPKT--IVAYFRSATAIYAGDEVRVAGVR 63
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG I + + + P+ A I L Y++L+
Sbjct: 64 VGTIEAIEPQG---TRAKMTLAVDRGVPIPADAEAIIVAPNLVSARYVQLTPAWGASPET 120
Query: 125 FQIATERNQR--AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
TA P + + ++ +S + +A
Sbjct: 121 SGPTMADGGEIGQDRTAVPVEWDEIKEQLTRLAAELGPASGVSGTSLGRFIDTTADAMAG 180
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+S + +++ I ++ +
Sbjct: 181 NGEKLRETIAQLSGVGRILGEGSGDIVE---VIQNLQIFVTALRDSNTQIVQFQDRLADV 237
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHLLSDFSSKMKSKETSAFL 301
+ S ++ + + V +VR Q + + +++ L + +
Sbjct: 238 TSVVDGSRSDLDSAITTLSEAVGEVRRFVQGSRGQTVEQVQRLANVTQVLSDDSMVLKNI 297
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ A + +I + ++ + + + +
Sbjct: 298 LHAAPNALVNGYNIYNPDTGGPRGSFAMNNFANPVTMICSAIAAVENVTA 347
>gi|148252250|ref|YP_001236835.1| hypothetical protein BBta_0661 [Bradyrhizobium sp. BTAi1]
gi|146404423|gb|ABQ32929.1| hypothetical protein BBta_0661 [Bradyrhizobium sp. BTAi1]
Length = 273
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 2/122 (1%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ VG ++ + + +S ++ GS GL V F+G+
Sbjct: 2 RAINLIVGTLTIAAVAAGISGLLIKQKSRIAQQRSVMRVVFDGGSAAGLRKGGPVNFDGV 61
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
G+I+ + L E P +A + P+ TTA I QGL GI I L
Sbjct: 62 QAGQILSINL--ESPRRIVAMITLDKSAPIRKDTTAGIEFQGLTGIAAISLVGGAPTAPP 119
Query: 124 IF 125
+
Sbjct: 120 VP 121
>gi|85704728|ref|ZP_01035829.1| hypothetical protein ROS217_06600 [Roseovarius sp. 217]
gi|85670546|gb|EAQ25406.1| hypothetical protein ROS217_06600 [Roseovarius sp. 217]
Length = 153
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 35/104 (33%), Gaps = 2/104 (1%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP 78
+ + S DG+S + VR G+ VGR+ + LD E
Sbjct: 19 IGFLVYAGKTTGMTSGGAGEYPLSASF-RSADGVSVGTDVRLAGVKVGRVTQIALDPETY 77
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ ++ + + I ++GL G Y+E+
Sbjct: 78 R-AKTTFTVQDGINVPDDSAVAISSEGLLGGNYVEIMPGGSPFY 120
>gi|229490600|ref|ZP_04384438.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229322420|gb|EEN88203.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 359
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 91/291 (31%), Gaps = 12/291 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T + +FVV + + ++ G + V L+ VR G+
Sbjct: 6 APLTKLIIFVVVTVLATGLLAASIANLGGGGGTKFNAV---FSDVTSLNEGDEVRIAGVR 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT- 123
VG++ + + + + + + L S+ ATIR + L G YI LS +
Sbjct: 63 VGQVEKIAIVNDN--QAEVQFSVSDRDWLPASSIATIRFRNLVGQRYISLSQGEGSQGKK 120
Query: 124 ------IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ T + +A++ +K + Q I + +
Sbjct: 121 ITGGDTLPLSQTRPAVNLTTLFNGFKPLFTTLSADDVNKLSYQIIQVFQGESGTISELVR 180
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T + T++ A + I + + + ++ T + + + +
Sbjct: 181 NTASLTNTVADKDAVIGAVIKNLNDVLDTVNANDKNLDSLIVNTQQLVTGLANERGVVGS 240
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
V + +++ + + ++ + T ++ +L
Sbjct: 241 AVTSLAGLTDATADLLEPTRPSIQGSITALNTLATTLNRRSDDVNAVLETL 291
>gi|118462453|ref|YP_879940.1| virulence factor Mce [Mycobacterium avium 104]
gi|254773616|ref|ZP_05215132.1| virulence factor mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118163740|gb|ABK64637.1| virulence factor mce family protein [Mycobacterium avium 104]
Length = 475
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/283 (10%), Positives = 76/283 (26%), Gaps = 12/283 (4%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++++ +Y L+ + I+ S GL VR G+PVG I +
Sbjct: 16 IIALVAVLVGGVYVLTSQAKTRK-----IVGYFTSAVGLYPGDQVRVLGVPVGTIDTIDP 70
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ D + A I + L +I+L+ + A+
Sbjct: 71 RPTD---VKITMSVSQDVKVPKDAKAIIMSPNLVAARFIQLTPAYTGGPVLADGASIGLD 127
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R A P + + + ++ ++ +Q + T
Sbjct: 128 RT---AVPVEWDEVKQSLTQLAVQLGPTAGSMQGPLGAAINQAADTFDGKGESFHSALRE 184
Query: 194 ISHIDKMMHTTQ-VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+S + ++ + + + ++ +
Sbjct: 185 LSQAAGRLGDSRGDIFGTVKNLQILVNALSSSNEQIVQFAGNVASVSQVLADSSRHLDTT 244
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + E T + ++ S + +
Sbjct: 245 LGTLNKALSDIRGFLHENNSTIVDTVNNLNDFAKTLSDQSDNI 287
>gi|126436759|ref|YP_001072450.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236559|gb|ABN99959.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 342
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 37/302 (12%), Positives = 76/302 (25%), Gaps = 11/302 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ +FV F + +V GL + VR G+ VG++
Sbjct: 11 RLAIFVTVCGLTLFGLYAVFGQWRFQAEKKYNAE---FTNVGGLERGNFVRIAGVEVGKV 67
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + +L + L T A +R L G ++ L +
Sbjct: 68 EKVSVQRN--AFALVEFTTDDSVVLTQGTKAVVRYDNLIGGRFLALEEGAGAAARLESGQ 125
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT------TTIAN 182
T R + ++ Q I + T T A
Sbjct: 126 TIPLDRTAPALDLDALIGGFRPLFRALDPHQVNTLTRQLISAFEGQGATITSFLAQTSAL 185
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
T++ I+ + SD + + ++ + I
Sbjct: 186 TSTLADRDDLIGQVINNLNTVLGSLAGQSDQFGKAVDSLSELVAGLAERRSEISDGLANI 245
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ ++ + NTV +D LL+ +
Sbjct: 246 DSAAASIADLLTQARPPLQNTVAQTDRAAGIVVADHAYVDDLLNTLPDAYQQLNRQGMYG 305
Query: 303 NI 304
+
Sbjct: 306 DF 307
>gi|71909012|ref|YP_286599.1| hypothetical protein Daro_3400 [Dechloromonas aromatica RCB]
gi|71848633|gb|AAZ48129.1| Mammalian cell entry related protein [Dechloromonas aromatica RCB]
Length = 156
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 29/123 (23%), Positives = 41/123 (33%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M VG FV L F + + E+ + ++ GL V+
Sbjct: 1 MNRTVLDLWVGFFVALGLAALLFLSLKVGNLSSSHLSETYELQAKF-DNIGGLKVRGPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGRI+ + D I T A+I T GL G Y+ L
Sbjct: 60 SAGVVVGRIIDIRFDAATYEAV-VSMTIDGRYHFPKDTFASINTAGLLGEQYVGLDAGGD 118
Query: 120 EKK 122
EK
Sbjct: 119 EKM 121
>gi|300718604|ref|YP_003743407.1| toluene tolerance ABC transporter, periplasmic subunit [Erwinia
billingiae Eb661]
gi|299064440|emb|CAX61560.1| toluene tolerance ABC transporter, periplasmic subunit [Erwinia
billingiae Eb661]
Length = 182
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ LF + F ++ + ++ GL + S V+
Sbjct: 1 MQTKKSEIWVGVFLLLALFAALFLCLRVADLQSLGSTPTWKLYATFDNIGGLKSGSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + + I L +++ IRT GL G ++ L+
Sbjct: 61 GGVVIGRVSDIELDPKTYSP-RVTMDIEDQYNQLPDTSSLAIRTSGLLGEQFLALNVGFD 119
Query: 120 EKKT 123
+
Sbjct: 120 DPDM 123
>gi|297190644|ref|ZP_06908042.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197719871|gb|EDY63779.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 423
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 5/133 (3%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + V+++L F + + + + GL T S+V
Sbjct: 1 MLTTAIRLKNIAFLVIAVLVLGFVGVRYADLGHLVGMRDHYTVKVRLAQTGGLFTHSNVT 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGR+ + L + A+ I+ D P + A + G YI+L
Sbjct: 61 YRGVSVGRVGDIELTADG---VEAELRIKDDAPRIPADLEAVVANLSAVGEQYIDLRPAS 117
Query: 119 KEKKTIFQIATER 131
+ + +
Sbjct: 118 DDAPYLEDGSVIA 130
>gi|116071571|ref|ZP_01468839.1| possible ABC transporter [Synechococcus sp. BL107]
gi|116065194|gb|EAU70952.1| possible ABC transporter [Synechococcus sp. BL107]
Length = 286
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 39/110 (35%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG ++ L + W+ + + GL+ S V +
Sbjct: 1 MRRSVRDAIVGFTILGGLAGFAATGLWMRGI-RLGSSDWRLTANF-NDAAGLAERSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGI 109
GI VG + + + + +A+ I + D L TATI + L G
Sbjct: 59 RGILVGSVRSIKV---TSSAVVAELEITKGDLRLPLPVTATIGSASLLGG 105
>gi|119714955|ref|YP_921920.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119535616|gb|ABL80233.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 424
Score = 76.9 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 6/133 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + FV L F + + V+ S G+ T V
Sbjct: 1 MITRRTRLQLLAFVAITLLGVSFVGARYARLDRIFFDDHYTVVAHFQDS-GGIFTGGEVS 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ +GR+ L L + I + + A + + G Y+EL
Sbjct: 60 YRGVQIGRVGQLEL---TDSGVDVYLDIDNGWDEIPADSLAVVGNRSAVGEQYVELQPQE 116
Query: 119 KEKKTIFQIATER 131
+ + +
Sbjct: 117 DSGPYLGEDSQIA 129
>gi|28871580|ref|NP_794199.1| mce-like protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213966603|ref|ZP_03394754.1| mce-related protein [Pseudomonas syringae pv. tomato T1]
gi|301383113|ref|ZP_07231531.1| mce-related protein [Pseudomonas syringae pv. tomato Max13]
gi|302058648|ref|ZP_07250189.1| mce-related protein [Pseudomonas syringae pv. tomato K40]
gi|302133825|ref|ZP_07259815.1| mce-related protein [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28854832|gb|AAO57894.1| mce-related protein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213928453|gb|EEB61997.1| mce-related protein [Pseudomonas syringae pv. tomato T1]
gi|330877178|gb|EGH11327.1| mce-like protein [Pseudomonas syringae pv. morsprunorum str.
M302280PT]
gi|330964019|gb|EGH64279.1| mce-like protein [Pseudomonas syringae pv. actinidiae str. M302091]
gi|331016695|gb|EGH96751.1| mce-related protein [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 155
Score = 76.5 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ T VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG++ + LD++ I+ L +TA+I T GL G YI LS
Sbjct: 61 AGVTVGKVTAIDLDRDTFTG-RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGD 119
Query: 120 EKKTIFQIATERNQ 133
+K Q
Sbjct: 120 DKLLKDGGTIHDTQ 133
>gi|226304394|ref|YP_002764352.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183509|dbj|BAH31613.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 406
Score = 76.5 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/369 (9%), Positives = 101/369 (27%), Gaps = 9/369 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ + LF + F I ++ + G + + GL+ + V + G
Sbjct: 2 SRLALVQLVLFALIAAVVVPFGIVYVVGPQGFGGQ-IRLHANMSD-AFGLTKGTVVTYRG 59
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG++ + LD + + + +T + + A + AGI +++
Sbjct: 60 VQVGKVSEVELDA-GTRSARVELSLNDNTEIPTDSVAKVTMGTAAGIQNVDIYPNTDHGP 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS------RHIQKIIENIEKPL 176
+ S + S + S + ++ +
Sbjct: 119 YLRDGDEIAMPADQQPVQMSQLMLQASGVLEGIDPQAISDIGTELGNSFNGLGPSLATMI 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
++ A + + + SDS T + + +
Sbjct: 179 DNGGTMSAQLNDQSAELAALLSRTSTLVDSMATQSDSFVRGMAAAKNFTEQLESNAPVLI 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + F K + + ++ + ++ L +
Sbjct: 239 YLTDHSPAALNSAQQLFDKYHNTFGAVLANLVTVAPIISDRTDALETGLVTIPEGLAKLA 298
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ + + + + + + T ++ +D Q+ A+ +
Sbjct: 299 SIVKGDRADFALVATQGPVCNYDTPRREVGDLSPTSPSLAMYCPPADDLVQRGAQNAPRP 358
Query: 357 NNISALKEN 365
N++
Sbjct: 359 NDLGLQNST 367
>gi|222474790|ref|YP_002563205.1| Conserved family protein [Anaplasma marginale str. Florida]
gi|222418926|gb|ACM48949.1| Conserved family protein [Anaplasma marginale str. Florida]
Length = 154
Score = 76.5 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/113 (23%), Positives = 44/113 (38%), Gaps = 4/113 (3%)
Query: 6 YYTSVGLFVVSILFFSFF-SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG+ V + + LS Q+ + VDGL S VR +G+
Sbjct: 10 TEVVVGILVSAAVVALGAHVTNRLSHEMQFYKGCHTIHAYFTD-VDGLRVGSEVRVSGVN 68
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
VG + L LDQ + K ++ L ++AT+ L G Y+++
Sbjct: 69 VGSVTALHLDQNNMP--VVKMCVQKGVSLPVDSSATVTYADLLGKKYVDIMPG 119
>gi|313681465|ref|YP_004059203.1| mammalian cell entry related domain protein [Sulfuricurvum kujiense
DSM 16994]
gi|313154325|gb|ADR33003.1| Mammalian cell entry related domain protein [Sulfuricurvum kujiense
DSM 16994]
Length = 459
Score = 76.5 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 35/348 (10%), Positives = 98/348 (28%), Gaps = 6/348 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GLFVV L F ++ ++ + I G+ + V NG+ +G
Sbjct: 4 EAKIGLFVVMALGALLFLSTQVTSLGKWGSEGYVIQAYI-NDASGIEKHTHVLMNGVTIG 62
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + ++ + +I + ++ + + L G + ++
Sbjct: 63 DVEEITIEG---KRVKLQLMIDKGVKIPVDSSVIVAQESLLGSKVLNITVGDSASSIADG 119
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
++++ S + + + + + E + +
Sbjct: 120 GTLSQSKQFASFDQTSDSVNAAAKELESLLRDFHAILDDEHRQAIQEAIIAFRNVGVNLD 179
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
++ N + + + + + +T N I + + A K+ ++
Sbjct: 180 GVIVENRDDLHAAIANFRAMGAGFTQTADTVNKDLPEIMARINSLTAQLDSKLPTAVDKF 239
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+N + +T+ E+ +F + G++ + S + E +
Sbjct: 240 TNIEDNVSTILAENRSTLKTTLESAGSFFKSGEEAFGKVDSMLSSFTTSELQVAMHTDYM 299
Query: 307 STSNMRSSIS--AIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + +N QK L
Sbjct: 300 MRDQYGKVYLGVNYLPNPETYYMFDLISTDDYSDANNPPKKHQKSDTL 347
>gi|330808643|ref|YP_004353105.1| putative paraquat-inducible protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327376751|gb|AEA68101.1| putative paraquat-inducible protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 552
Score = 76.5 bits (185), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/400 (10%), Positives = 95/400 (23%), Gaps = 32/400 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S V IPVG++V LD E D + +T +
Sbjct: 173 SQDLGSLDIGSPVYLRKIPVGQVVSYALDAEGKGVNIDVFVNAPNDVYVTENTRFWNVSG 232
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + + +D
Sbjct: 233 VDVNVGANGFAVKTESLSALLLGGI--------------------AFRAPEYSPNDVPAS 272
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
K E + + + + V + D
Sbjct: 273 EDKTYELFADQQSALAPPDGKAQYLALRFDQALRGLRVGAPVEFLGVEVGRVVAIHLDFD 332
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + Q L + +KS + + +F E G +
Sbjct: 333 EKQRSFPVNVGVVIYPQRLGK---AHEKLLKSLNHNPDDEAAGARLIGSFVERGLRAQAR 389
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ + + + + + +Q IE I
Sbjct: 390 SGNLLTGQLYISLDFYPKAEKVAFDPSARPVRIPTIPGSLQQLQEQLQAMIERINKLP-- 447
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ ++ ++ L + + + + T + +++ + S + L S
Sbjct: 448 ----LESIAGNLDGNL-VELRKGLTQFNSKTLPGVQSTLQDVSKTLQSANSTLAEDSPQ- 501
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + L + + R+P+ ++ GR K +
Sbjct: 502 REQLTQTLDDLGRMSRSLRELSDYLSRHPESLLRGRPKDA 541
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DG + +R ++ GL + V F G+ VGR+V + LD + + +Y
Sbjct: 291 DGKAQYLALRFDQALRGLRVGAPVEFLGVEVGRVVAIHLDFDEKQR---SFPVNVGVVIY 347
Query: 95 P 95
P
Sbjct: 348 P 348
>gi|197119106|ref|YP_002139533.1| ABC transporter periplasmic substrate-binding protein [Geobacter
bemidjiensis Bem]
gi|197088466|gb|ACH39737.1| ABC transporter, periplasmic substrate-binding protein, MCE
domain-containing protein [Geobacter bemidjiensis Bem]
Length = 356
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/320 (11%), Positives = 95/320 (29%), Gaps = 12/320 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+ S+ GL VR G+ VGRI G+ + + ++P T +
Sbjct: 33 FEKNVPYKTYLT-SITGLKVGDPVRLAGVDVGRIKGINILND---KIEINFEVKPGTRIK 88
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
T A +R L G ++ LS + + + + I+ + N +
Sbjct: 89 TDTVAGLRLTNLLGGQFLGLSFGSPNASLLEPGGVVKGKDV------ANIDIIVDNLSDV 142
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
K ++ + + + K ++ + +NI+ I M + + ++
Sbjct: 143 VKDAKVFVNNLDRNQDVVLKKISVMLDENRGNLKESISNINSITGKMDRGEGSLALLLNE 202
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQI--LENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
K++ + + L N + + + D+ +
Sbjct: 203 RKLFDDASGAVESLKVVAGKIERGEGTLGKLVNDDTVYRDASALITDLRSGAKDLNAGLK 262
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+E+ K++ + + A L + + + I++ + +
Sbjct: 263 DVKEITAKVNRGEGTLGKLINDETLYADLREASKNVKEITQKINSGQGTLGKLVNEDQLY 322
Query: 333 NTIENITSNLNDSSQKFAEL 352
+ + +
Sbjct: 323 RDTTATLKKTERAMEGLGDA 342
>gi|288960746|ref|YP_003451086.1| paraquat-inducible protein B [Azospirillum sp. B510]
gi|288913054|dbj|BAI74542.1| paraquat-inducible protein B [Azospirillum sp. B510]
Length = 566
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/399 (9%), Positives = 97/399 (24%), Gaps = 30/399 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V F G+ +G ++ L + ++ ++ + +
Sbjct: 187 LAQGSPVYFRGVQIGEVMSYNLSPQDRTVSVSVFVRAPYESVVHEGSRFWRSSGVQFTAG 246
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + KT+ A P +
Sbjct: 247 ADGIKFQTESLKTLVLGGVVLETPPDPEAGPQAAD--------------------WASFV 286
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
E + A + + V + + + ++
Sbjct: 287 LYEDQASAAAARDRLRVRYRLEFPGSVQGLQAGAPVLMRGLTVGHVAAVRIEYDEASRQI 346
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+D+ ++ +N + V E + + S
Sbjct: 347 RIPVDIDLEPDLVARTYGIFDNRPMDEAALRRLVATQVEKGMRGRLASGNLLTGQKLVSF 406
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + SS + ++ + ++L + Q +
Sbjct: 407 DFEPGPYRPAPGTERSELPTLASSDMDSLTRSAGAVMDKVAALPLDGLIADLRGTLQSVS 466
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTS----EKINRYIPSIGNNLQNF-----S 401
+ + +L A M + +N + L +
Sbjct: 467 GVAGSPDLARSLAALAKALGSADALMRNADRQLPLLVKSLNGVAAAAEGTLNSAKGLLGG 526
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
G D+ ++R+L + F + ER+P+ ++ G+
Sbjct: 527 GGGQADLPGVMRQLNDAARSFRVLADYLERHPEALLQGK 565
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/66 (24%), Positives = 26/66 (39%), Gaps = 3/66 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + PGSV GL + V G+ VG + + ++ + + + I D L
Sbjct: 299 DRLRVRYRLEFPGSVQGLQAGAPVLMRGLTVGHVAAVRIEYDEASR---QIRIPVDIDLE 355
Query: 95 PSTTAT 100
P A
Sbjct: 356 PDLVAR 361
>gi|240172710|ref|ZP_04751369.1| MCE-family protein Mce1F [Mycobacterium kansasii ATCC 12478]
Length = 518
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 30/255 (11%), Positives = 76/255 (29%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + +P S GL ++V + G+ +G++ + + A
Sbjct: 27 YYLRIPSLAGIGRYTLKAELPAS-GGLYPTANVTYRGVTIGKVTDVEPTPTG---AEATM 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + +A + + G Y++L + K T P+
Sbjct: 83 SIDSRYKIPVDASANVHSVSAVGEQYLDLVSTGNPGKVFSPGQTITKGTVPSEIGPALDT 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ KI + + + L + + I I+ ++ ++ +
Sbjct: 143 ANRGLQVLPADKIPVLLDETAQAVGGLGPALQRLVDATQAIVGDFRTQINDVNDIIDHSG 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + A Q V IL +++ + V +++
Sbjct: 203 PVIESQVRSGDAIERWAHNLNTLAAQTAKRDQNVKSILSQAAPTADQLNEVFTDVRDSLP 262
Query: 266 DVRETTQTFQEVGQK 280
+ ++ ++
Sbjct: 263 QTLANLEVVFDLLKR 277
>gi|56710304|dbj|BAD81019.1| paraquant-inducible protein B [uncultured bacterium]
Length = 327
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 86/296 (29%), Gaps = 5/296 (1%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ T++G F++ + + L+ N + + +V+GL + V+F G
Sbjct: 2 RANPTAIGSFLIGAIIITVVGTAVLAG-NTWFTNRTTFVSYFQETVNGLEEGAPVKFQGA 60
Query: 64 PVGRIVGLFL---DQEYPNHSLAKALIR-PDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
PVG + + + +++ + I T + Q + + +
Sbjct: 61 PVGTVSKILIQIDERDKTFQVQVEYEIDIRSLRTQAGTFVDLSQQPVLDRQIADGLRAQL 120
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ ++I A P + + S + + +
Sbjct: 121 QMESIVSGMLYIELSYRKDAKPPELEPRATRWPEIPTTPSLMAALGTGAGSVVADVVKVL 180
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
E ++ + I+ + + T +T+ A
Sbjct: 181 YKVNEMLAAIDMPEINAAVVASAQSVQRLVDAPELRTALREVPGMTAQLNRTMARVDTLA 240
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ I + ++ ++ T+ +R+T Q + L + + +
Sbjct: 241 STATAAIDPMAAELKGATKEMHATLQSLRKTIDETQGLLSTDSGLGFGLEAALVNL 296
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/261 (11%), Positives = 83/261 (31%), Gaps = 11/261 (4%)
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I + V I + S I D + + +M +
Sbjct: 72 IDERDKTFQVQVEYEIDIRSLRTQAGTFVDLSQQPVLDRQIADGLRAQLQMESIVSGMLY 131
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ + + ++ T +G +++D +
Sbjct: 132 IELSYRKDAKPPELEPRATR----WPEIPTTPSLMAALGTGAGSVVADVVKVLYKVNEML 187
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
++ + + + +S +++ + D ++ + + + +T+ LN + + L S
Sbjct: 188 AAIDMPEINAAVVASAQSVQRLVDA-PELRTALREVPGMTAQLNRTMARVDTLAST---- 242
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
A + + + + A T + + + I L S G ++ + L++
Sbjct: 243 -ATAAIDPMAAELKGATKEMHATLQSLRKTIDETQGLLSTDSGLGFG-LEAALVNLKDAT 300
Query: 420 NHFDDCLNNFERNPQDIVWGR 440
N + E+NP ++ G+
Sbjct: 301 NALRQLMTALEQNPDMLLRGK 321
>gi|311744829|ref|ZP_07718625.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311311946|gb|EFQ81867.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 393
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/387 (10%), Positives = 111/387 (28%), Gaps = 23/387 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ +FVV L + F ++ V + P ++ L S VR G+PVG +
Sbjct: 16 VLAIFVVLALLAAVFLVF------NRSTSDKTVTVDFPQAIS-LYEGSDVRILGVPVGTV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
L + A D L A + + + G +++++ + A
Sbjct: 69 QELEARGD---RVRATISYDADIDLPADVKAMVVSPAIVGDRFVQMAPAYTSGAVLADGA 125
Query: 129 TERNQ-----RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + S + ++ + + + S + ++ I
Sbjct: 126 EIGIENTAVPVELDEIYASLNDLSVALGPDGANRDGALSSLVSDTAAQLDGQGAQLNETI 185
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ + D + + + + + + + + + +
Sbjct: 186 RNFGRLSTTLADNSDDLFGSIREVSEFVALLERNDQVVRAFNDSTAGVADLLADERDDLA 245
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ S+ + V + +RE + V + + + ++F + T+
Sbjct: 246 ATLATLSDALIDVESLVRDNRGTLRENVVNLRVVAETLANREAEFEEITVAAPTALVNVA 305
Query: 304 IA------DSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
+A +++ +S + D Q + + L I+
Sbjct: 306 LAYNGVYGTLDTHVNLPLSITELLGDPAQLLCGLLGENSEGDGPCATILGLLDLL--PID 363
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSE 384
+ + D+ A + +
Sbjct: 364 ALLPRVATANTPLDSDPAARSVAEMLA 390
>gi|317125891|ref|YP_004100003.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
gi|315589979|gb|ADU49276.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
Length = 338
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 45/137 (32%), Gaps = 4/137 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + LF + + ++ + G+ VR
Sbjct: 1 MRTAGSLVKLVLFAAVTVLSTSILALTIANVQVGSKATYRAV---FSDATGVLPGQDVRI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG I G+ + + + + + + L T AT++ + L G Y+ L+
Sbjct: 58 AGVRVGEITGVRVGADRASAV-VEFTVLTSSVLTRGTEATLKYRNLVGQRYLALAPGAGG 116
Query: 121 KKTIFQIATERNQRAMI 137
+ AT +R
Sbjct: 117 ATALADGATIPRERTHP 133
>gi|294632696|ref|ZP_06711255.1| virulence factor Mce family protein [Streptomyces sp. e14]
gi|292830477|gb|EFF88827.1| virulence factor Mce family protein [Streptomyces sp. e14]
Length = 351
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 39/105 (37%), Gaps = 2/105 (1%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
V + ++ LS +N G + V GL SVR +G+ VG + +
Sbjct: 21 LVFVAVTALATTVLGLSVANTGVGDGTHSYKALFTDVTGLVDGDSVRVSGVKVGEVTDVR 80
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + +R L STTA ++ + G Y+ L
Sbjct: 81 VV--DHRTAQVTFSVREGQTLPRSTTAAVKYLNMVGQRYLALDRG 123
>gi|294670973|ref|ZP_06735829.1| hypothetical protein NEIELOOT_02679 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307460|gb|EFE48703.1| hypothetical protein NEIELOOT_02679 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 541
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/398 (9%), Positives = 93/398 (23%), Gaps = 34/398 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L T + V + PVGR+ D E S D+ + S+ + +
Sbjct: 174 LETGAPVVYESFPVGRVESAKFDPESRRVSYTVFIEHPNDSLINSSSQFWLDSGIRIQAD 233
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ A + + + +
Sbjct: 234 GGGFQLDSAPLGALISGAI--------------------TFRTPDRAAPPAKAEGKFELY 273
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + T + S +
Sbjct: 274 DNRAAVDRLPGERAMYYTAFFRQSVRGLNAGSPVEYKGVKVGSVADVPYFGRGDSLKLFE 333
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ + Q S + + T + + ++ +
Sbjct: 334 NGWIPVRLRIEPHLIEQNSDRESREYWQKAFQTALNGGLNATLSSDNLLLGSKMIELTDA 393
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ E + R + ++ LN S +
Sbjct: 394 PSDGERLKPMAEYNGLTVIATRGGGFDDLQAQLGNLLEKFNKLPLDKTVGELNGSLAELK 453
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ N++ A + ++ + + + R + I+ S D+Q
Sbjct: 454 STLKLANSLLAKPQTQAIPAELNKTLAELRQALQGISP------------SSPVYRDVQE 501
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGR-EKGSVKI 447
+R + +T+ LN + P +++ R EK +
Sbjct: 502 TLRNIDQTLRDAQPVLNTLKEKPNALIFNRSEKDPIPK 539
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 11/64 (17%), Positives = 17/64 (26%), Gaps = 7/64 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP-------NHSLAKALI 87
SV GL+ S V + G+ VG + + + I
Sbjct: 284 GERAMYYTAFFRQSVRGLNAGSPVEYKGVKVGSVADVPYFGRGDSLKLFENGWIPVRLRI 343
Query: 88 RPDT 91
P
Sbjct: 344 EPHL 347
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 17/93 (18%), Positives = 35/93 (37%), Gaps = 8/93 (8%)
Query: 13 FV-VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVG 70
FV + L + L + GP + + S DG+ +++V R + VG++
Sbjct: 22 FVWLVPLIAFLVGGWLLFDHIRNTGPKVTLYL---DSADGIEVNNTVVRVLSVNVGKVTN 78
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ L ++ A + D + T +
Sbjct: 79 IRLREDGKG-VELTAQLNADVKHMMRSDTQFWV 110
>gi|254776979|ref|ZP_05218495.1| hypothetical protein MaviaA2_20241 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 512
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 80/255 (31%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + + +P S GL ++V + GI +G++ G+ + A
Sbjct: 27 YYLRIPSLAGIGRYTLYVELPQS-GGLYRTANVTYRGITIGKVTGVEP---TERGARATM 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I D + A + + G Y++L + + + T P+
Sbjct: 83 SIEDDYRIPADAAAHVHSVSAVGEQYVDLVSTAGREPYLVDGQTIHKSTVPSQIGPALDA 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A KI+ + + + L + + I+ +I H+D ++ +
Sbjct: 143 ANRGLAVLPRDKIASLLYETSQAVGGLGPSLRRLVDATQAIAHDFRGSIDHVDDIVERSA 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + A + IL N ++ + V ++
Sbjct: 203 PIIDSQADSADTLGRWAANLNTLAAQTARQDPALRSILANAAPTAEQVRATFGGVRESLP 262
Query: 266 DVRETTQTFQEVGQK 280
+ ++ ++
Sbjct: 263 QTLANLEVVIDMLKR 277
>gi|120401391|ref|YP_951220.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954209|gb|ABM11214.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 439
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 33/339 (9%), Positives = 95/339 (28%), Gaps = 9/339 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++S+L + + V++ + +GL VR G+PVGR++ +
Sbjct: 10 LLSVLLATILVGGLVVVVGAGGRTSQNVVVAYFENSNGLFPGDDVRVLGVPVGRVLEIEP 69
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + A I + L I+L+ + A
Sbjct: 70 QPD---RAKVTFGYDRAIQIPADAKAAILSPQLVTGRAIQLTPAYTGGPVMADGAVIDQS 126
Query: 134 RAMITATPSGINYFISNAENTSKKISDS-----SRHIQKIIENIEKPLTTTIANIETIST 188
R ++ + K + +N+ + +S
Sbjct: 127 RTVVPVEWDDFRDQLERLTELLKPTEPGGVSTLGAFVNTAADNMRGQGGAIRDTVVKLSQ 186
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
L+ H D + T + + + + + + + +++ ++
Sbjct: 187 TLSTLGDHSDDIFATFTNLSTVVTALHDSSGALEALNGNLAQVSTLLADNPDKVGLAVEA 246
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-SSKMKSKETSAFLENIADS 307
+ ++ + T+ + + L D + + T NI +
Sbjct: 247 LNAAAIEVKTFAEENRDVIGTTSDKLTSISSTLVGSLDDIKQTLHIAPTTIGNFANIYEP 306
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + A+ ++ + + + + +
Sbjct: 307 ANGALTGALAVNNFSNPIEFLCGAVQAASRLNGEQSAKL 345
>gi|326382394|ref|ZP_08204086.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199124|gb|EGD56306.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 320
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 34/297 (11%), Positives = 84/297 (28%), Gaps = 9/297 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+++ T + + ++++F + + + + GL S V G
Sbjct: 2 NRSSSTLISMVALAVVFVVGLGYLVVGVARVNPTRSEYSLTAFIDNSGGLLDTSPVMVRG 61
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL-STLRKEK 121
+PVG++ + + + + I D + + +I+ LAG YI T
Sbjct: 62 VPVGKVASINVV---DSALKVEMTIDSDHKIPQDSGMSIQNLSLAGEQYINFVPTGTATG 118
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT---- 177
++ + + ++ + S S + +
Sbjct: 119 GYFHNGDVVPADAVHVSQSVPQVLPKMAAVADGLDPASIESINKTVAEAVAGRQEDLDTI 178
Query: 178 -TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ + + D + ++ D +T T + I+ +
Sbjct: 179 GDMMHRLVNFVGKDGSVRVTADNAEFLLGLMSNTGDVLSTAAVRTPDAVNGLARIQRAFI 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + K S + D+ T+ + K+ DF S
Sbjct: 239 EFTTTSYDKWPPVLKLVEKLSGYIQILQPDLLTITRAVKPATAKVADTYVDFGSIGD 295
>gi|255658875|ref|ZP_05404284.1| ABC-type transport system [Mitsuokella multacida DSM 20544]
gi|260848823|gb|EEX68830.1| ABC-type transport system [Mitsuokella multacida DSM 20544]
Length = 428
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 37/341 (10%), Positives = 97/341 (28%), Gaps = 6/341 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG F V + LS + + V G+ +S VR +G+P
Sbjct: 2 TTEAKVGAFTVVGVVLFVAVAMLLSGVSLSGHKGYTLYAGFKQ-VIGVEPESVVRLSGVP 60
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + I + ++ T+ + G+ G +I + + + +
Sbjct: 61 VGKVKSVR---NDGGGVTVALDIDGKAKIPKGSSVTVASAGVMGEKFINILPGKDQGIYL 117
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
Q + + + + + S + + + I ++
Sbjct: 118 GDGDYLIGQEEEGMDSLMAKAGNVMD-QVQALLDSMNQVMGNPDFQKNFLQMAVNIRDMT 176
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
L + + S+ + + + M + Q E
Sbjct: 177 AHMDGLVAAMEQTMRENQGNITGMLSNLNAASAGLNRTMNQVEAMMTNLATVGADPQTAE 236
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
N++++ N +SD++ + ++ + + I + + +
Sbjct: 237 NLRLTLANIKDTSDRIAHIAENMDGAVGD-PQTAEDIKTTIRNARQMSEKAGNMMGKLED 295
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ S ++ + T + + L+D
Sbjct: 296 IKVKPSADLLYSGAKDDWKANFNVDLGPETGNFLRAGLDDI 336
>gi|288958845|ref|YP_003449186.1| hypothetical protein AZL_020040 [Azospirillum sp. B510]
gi|288911153|dbj|BAI72642.1| hypothetical protein AZL_020040 [Azospirillum sp. B510]
Length = 169
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+V S+ GL + + VR +G+ VG + GL LD ++ + L
Sbjct: 35 QGYDVTANF-NSITGLQSGADVRISGVKVGTVTGLTLDP-TSFQAVVHLSVDNSVKLPKD 92
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
T A I ++ L G ++ L E
Sbjct: 93 TAAVIASESLLGGKFLSLEPGGDPDTIKPNGKIE 126
>gi|118470845|ref|YP_884761.1| mce-family protein mce3c [Mycobacterium smegmatis str. MC2 155]
gi|118172132|gb|ABK73028.1| mce-family protein mce3c [Mycobacterium smegmatis str. MC2 155]
Length = 442
Score = 76.5 bits (185), Expect = 8e-12, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 94/286 (32%), Gaps = 14/286 (4%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+GL ++I + + GL+T ++VR +G VG++
Sbjct: 16 IGLVGIAITVVIALAALNFDKLPLLSSTKGY--SAYFADAGGLNTGATVRVSGFAVGKVE 73
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ LD L + L + A I+ + L G I++ I +
Sbjct: 74 RIRLDG---RKVLVDFTVDSAIHLGEQSEAAIKVKSLLGTKVIDV---------IPRGGG 121
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ ++ + T S + + + + ++ + ++ + + T +++
Sbjct: 122 QLHEPIPLERTTSPYQLPDALGDLATTVENLNTDDLSAALDTMAQTFAGTPPDVKIAVAG 181
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+A I+K + ++ L ++ + +
Sbjct: 182 VARLSETINKRDTELRNLLANARKATAVLATRTDQVVGLVQDSNALLAELRTQSDALDRV 241
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
S + +++ Q+ + D R+ + + + ++ + +++
Sbjct: 242 SQDISRAATQLRGFMADNRQQLRPMLDKLNGVLTIVDNRKDRLQEA 287
>gi|302560793|ref|ZP_07313135.1| virulence factor Mce family protein [Streptomyces griseoflavus
Tu4000]
gi|302478411|gb|EFL41504.1| virulence factor Mce family protein [Streptomyces griseoflavus
Tu4000]
Length = 352
Score = 76.5 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
FV+ + ++ + G V GL SVR +G+ VG + +
Sbjct: 23 AFVLVTALATTVLGLSVADTG-VSGGTRSYKALFTD-VTGLVDGDSVRISGVEVGEVTDV 80
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + +R D L S TA+++ + G Y+ L
Sbjct: 81 RVV--QRRTAQVTFTVREDRRLPRSATASVKYLNMVGQRYVALDRG 124
>gi|254796886|ref|YP_003081723.1| mce-related protein [Neorickettsia risticii str. Illinois]
gi|254590122|gb|ACT69484.1| mce-related protein [Neorickettsia risticii str. Illinois]
Length = 159
Score = 76.5 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 18/121 (14%), Positives = 38/121 (31%), Gaps = 2/121 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+ +L + ++ S + + I + GLS S V +G+ VGR+ + +
Sbjct: 23 TLVLLVSALIFVFLSSNFSLLKRSDCYELNAIFDNASGLSIGSDVFLSGVKVGRVTEVSI 82
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
E + + L + A + + T + + T
Sbjct: 83 --EDSFMVHIRMCVSERIRLPSDSVAMVSAGNILSTTKHINIDPGTSSEVLPPGGTFERT 140
Query: 134 R 134
R
Sbjct: 141 R 141
>gi|229494597|ref|ZP_04388360.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318959|gb|EEN84817.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 406
Score = 76.5 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/369 (9%), Positives = 101/369 (27%), Gaps = 9/369 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ + LF + F I ++ + G + ++ GL+ + V + G
Sbjct: 2 SRLALVQLVLFALIAAVVIPFGIVYVVGPQGFGGQI--LLHANMSDAFGLTKGTVVTYRG 59
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG++ + LD + + + +T + + A + AGI +++
Sbjct: 60 VQVGKVSEVELDA-GTRSARVELSLNDNTEIPTDSVAKVTMGTAAGIQNVDIYPNTNHGP 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS------RHIQKIIENIEKPL 176
+ S + S + S + ++ +
Sbjct: 119 YLRDGDEIAMPADQQPVQMSQLMLQASGVLEGIDPQAISDIGTELGNSFNGLGPSLATMI 178
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
++ A + + + SDS T + + +
Sbjct: 179 DNGGTMSAQLNDQSAELAALLSRTSTLVDSMATQSDSFVRGMAAAKNFTEQLESNAPVLI 238
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + F K + + ++ + ++ L +
Sbjct: 239 YLTDHSPAALNSAQQLFDKYHNTFGAVLANLVTVAPIISDRTDALETGLVTIPEGLAKLA 298
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ + + + + + T ++ +D Q+ A+ +
Sbjct: 299 SIVKGDRADFALVATQGPACNYDTPRREVGDLSPTSPSLAMYCPPADDLVQRGAQNAPRP 358
Query: 357 NNISALKEN 365
N++
Sbjct: 359 NDLGLQNST 367
>gi|145224744|ref|YP_001135422.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145217230|gb|ABP46634.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 484
Score = 76.5 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 97/298 (32%), Gaps = 10/298 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + LF ++ + + ++ EV +++P GL ++V
Sbjct: 1 MLTRLVRIQLTLFAIASVVGIAVMVLQYIRVPTLLGIGRIEVTLQLPE-AGGLYRFANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G++ L +D++ + A + + A +R+ G Y++L +
Sbjct: 60 YRGVQIGKVTALDVDRDG---AEATLSLSGTPRVPADLRAEVRSVSAVGEQYVDLQPRSR 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A + + + + +S+ + ++++ +
Sbjct: 117 SGPYLESGAVIPSSAVTVPQRVAPMMQNLSDL-----ITDIPKDKLAQLLDESFAAFDGS 171
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
++T++ + + +D++ T + + A ++
Sbjct: 172 GYELQTLAESMTRISADMDRVAGRTSSLIEDTAPVLDGQAASADALDTWAADLAAISAQL 231
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
I+ ++ QV + VR T + + + + ++
Sbjct: 232 VDRDPEIRRILTTGTPAAQQVTQLIEQVRPTLPVLLANLTSLGQVGLTYRAGLEQLLV 289
>gi|327405359|ref|YP_004346197.1| Mammalian cell entry related domain-containing protein [Fluviicola
taffensis DSM 16823]
gi|327320867|gb|AEA45359.1| Mammalian cell entry related domain protein [Fluviicola taffensis
DSM 16823]
Length = 345
Score = 76.5 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 35/362 (9%), Positives = 108/362 (29%), Gaps = 22/362 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K GL + + I +L + + G + P + GL +SV
Sbjct: 1 MKIKK-EVKAGLIAILAIGLLVTGINFLKGYSFFGGDA-KYTAYFP-NAGGLGASTSVYL 57
Query: 61 NGIPVGRIVGLFLDQ--EYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTL 117
NG+ +G+I+ + + + + ++ D + S+ + L
Sbjct: 58 NGVVIGKIISVDYNPSGDSLSKVKMVFTVQEDGLKIPKSSVVETGSVDLLNKGLFLFMGD 117
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
K + + + + + ++ + + + + + +
Sbjct: 118 DLSKGYYKEGEAIQGRVQL----------------DMFGQLKSYANPVMQKVSALVVNVD 161
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
TI +++ A + + + + + L +++ ++
Sbjct: 162 KTITSLKGFWDTTATSELKTSLEELKYAFKKFGNIADDVEGLVATEKVKLSRIMSNVESI 221
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
N N ++S D ++ +K++ ++ S +
Sbjct: 222 TGNLKASNEKISKIVGNFEKVSDDLVTADFKKVINNANTTIEKLNATFAEIESGKGTLGK 281
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
E + + S+ + + + + T + + + +L + ++
Sbjct: 282 LLKDEKLYNELVVTNKSLQNLVNDIELHPERYIHFSVFGAKTKGVPITGNEEKKLRNLLD 341
Query: 358 NI 359
+I
Sbjct: 342 SI 343
>gi|312887100|ref|ZP_07746704.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
gi|311300412|gb|EFQ77477.1| Mammalian cell entry related domain protein [Mucilaginibacter
paludis DSM 18603]
Length = 333
Score = 76.5 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+FV++ L S Y + + G + R +++GL ++V F+GI
Sbjct: 7 NNIKLGVFVLAGLIVMIVSFYMIGNNASMFGSGFVLKARF-NNLNGLMEGNNVLFSGIQA 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + + + + ++ + A I T+GL G I + ++ +
Sbjct: 66 GTVKSINIVNDTTIEVSMLIDSKVTAYIHTNAEAAIGTEGLMGNKVINIQPVKPNSPVVK 125
Query: 126 QIAT 129
Sbjct: 126 SGDL 129
>gi|240170053|ref|ZP_04748712.1| MCE-family protein Mce4B [Mycobacterium kansasii ATCC 12478]
Length = 350
Score = 76.5 bits (185), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 88/286 (30%), Gaps = 6/286 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ V +F +++L + + GP A + L VR GI
Sbjct: 10 RSMVIKVSIFALAMLLVAAALVVVFGDFR--FGPKATYHATFT-NASRLKAGQKVRIAGI 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + G+ L+ + + LY ST A +R + L G Y+E+++ E +
Sbjct: 67 PVGAVSGVALNPDNT--VDVTFGVDKRYTLYSSTRAVVRYENLVGDRYLEITSGPGELRK 124
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ T Q + + + +IE ++ +
Sbjct: 125 LPPGGTINAQHTQPALDLDALLGGLKPVLKGL-DADKVNTITSAVIELLQGQGGALSDVL 183
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S + + + + + + + I
Sbjct: 184 GETSAFSTALGRRDQLIGDAITNLNTVLATVDQKSAQFSASVDQLQQLITGLANNKDAIA 243
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
I ++ +D + N+ ++ + + + ++D ++ +
Sbjct: 244 GAIPPLASTTTDLTDLLRNSRRPLQGILENARPLATELDDRKAEIN 289
>gi|226305215|ref|YP_002765173.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226184330|dbj|BAH32434.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 359
Score = 76.1 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 37/291 (12%), Positives = 91/291 (31%), Gaps = 12/291 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T + +FVV + + ++ G + V L+ VR G+
Sbjct: 6 APLTKLIIFVVVTVLATGLLAASIANLGGGGGTKFNAV---FSDVTSLNEGDEVRIAGVR 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT- 123
VG++ + + + + + + L S+ ATIR + L G YI LS +
Sbjct: 63 VGQVEKIAIVNDN--QAEVQFSVSDRDWLPASSIATIRFRNLVGQRYISLSQGEGSQGQK 120
Query: 124 ------IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ T + +A++ +K + Q I + +
Sbjct: 121 ITGGDTLPLAQTRPAVNLTTLFNGFKPLFTTLSADDVNKLSYQIIQVFQGESGTISELVR 180
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T + T++ A + I + + + ++ T + + + +
Sbjct: 181 NTASLTNTVADKDAVIGAVIKNLNDVLDTVNANDKNLDSLIVNTQQLVTGLANERGVVGS 240
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
V + +++ + + ++ + T ++ +L
Sbjct: 241 AVTSLAGLTDATADLLEPTRPSIQGSITALNTLATTLNRRSDDVNAVLETL 291
>gi|315445074|ref|YP_004077953.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315263377|gb|ADU00119.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 484
Score = 76.1 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 97/298 (32%), Gaps = 10/298 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + LF ++ + + ++ EV +++P GL ++V
Sbjct: 1 MLTRLVRIQLTLFAIASVVGIAVMVLQYIRVPTLLGIGRIEVTLQLPE-AGGLYRFANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G++ L +D++ + A + + A +R+ G Y++L +
Sbjct: 60 YRGVQIGKVTALDVDRDG---AEATLSLSGTPRVPADLRAEVRSVSAVGEQYVDLQPRSR 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A + + + + +S+ + ++++ +
Sbjct: 117 SGPYLESGAVIPSSAVTVPQRVAPMMQNLSDL-----ITDIPKDKLAQLLDESFAAFDGS 171
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
++T++ + + +D++ T + + A ++
Sbjct: 172 GYELQTLAESMTRISADMDRVAGRTSSLIEDTAPVLDGQAASADALDTWAADLAAISAQL 231
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
I+ ++ QV + VR T + + + + ++
Sbjct: 232 VDRDPEIRRILTTGTPAAQQVTQLIEQVRPTLPVLLANLTSLGQVGLTYRAGLEQLLV 289
>gi|152972117|ref|YP_001337263.1| ABC transporter periplasmic substrate-binding protein [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238896700|ref|YP_002921445.1| putative ABC transport system periplasmic binding component
[Klebsiella pneumoniae NTUH-K2044]
gi|262042752|ref|ZP_06015906.1| toluene ABC superfamily ATP binding cassette transporter, binding
protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|329997631|ref|ZP_08302888.1| hypothetical protein HMPREF9538_00526 [Klebsiella sp. MS 92-3]
gi|150956966|gb|ABR78996.1| putative transport protein (ABC superfamily, peri_bind) [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|238549027|dbj|BAH65378.1| putative ABC transport system periplasmic binding component
[Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]
gi|259039977|gb|EEW41094.1| toluene ABC superfamily ATP binding cassette transporter, binding
protein [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328538941|gb|EGF64995.1| hypothetical protein HMPREF9538_00526 [Klebsiella sp. MS 92-3]
Length = 183
Score = 76.1 bits (184), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 54/146 (36%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKTEIWVGVFLLVALLAALFVCLKAANVTSLRTEPTYRLYATFDNIGGLKARSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + I + +++ IRT GL G Y+ L+ +
Sbjct: 61 GGVVVGRVADITLDPKTY-LPRVELDIDERYNHIPDTSSLAIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
+ I + + +
Sbjct: 120 DPDLGTTILKDGGTIQDTKSAMVLED 145
>gi|262201466|ref|YP_003272674.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262084813|gb|ACY20781.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 395
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/279 (13%), Positives = 66/279 (23%), Gaps = 8/279 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F+ +L + + W + + D V+GL S V G+PVGRI +
Sbjct: 19 IFMALLLVGAIVAGLWYAFGAESDTRTVHAEFAF---VNGLYEGSKVTVLGVPVGRIDSV 75
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + L + +A + + ++EL AT
Sbjct: 76 EPAGD---RVKVTVSMPASIDLPANVSAYVLNPSVISDRHLELGPAYTGGPKFADGATIP 132
Query: 132 NQRAMITATPSGINYFISNAENTSKKIS--DSSRHIQKIIENIEKPLTTTIANIETISTV 189
+R + + I + I + T
Sbjct: 133 LERTHSPISFDQLLDSIGTLTKIMGPADSARNPDDPNSIGTLLASTAKAWDGRGTEFGTT 192
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+A S T+ DS N T + Q Q
Sbjct: 193 MAGLASASGVFGARTEDLQDLIDSLNQLMTTFRTKQVSLDGLVRSMSVLSAQWSTADQDI 252
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ V V + + L
Sbjct: 253 TGPINDLKVVFDQINGFVMAHGNDVGVVAENLRALGDTL 291
>gi|41409704|ref|NP_962540.1| hypothetical protein MAP3606 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398536|gb|AAS06156.1| hypothetical protein MAP_3606 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 518
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/318 (11%), Positives = 95/318 (29%), Gaps = 6/318 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S G++T VR G+ V
Sbjct: 8 NRVRIGLMGIVVTVLVIGVGQSFTSVPMLFAKPSYYG-QFTDS-GGINTGDKVRIAGMDV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ GL +D + H + K I +T + + I+T + G +++ ++
Sbjct: 66 GKVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIKTDTILGKKILDVEARGSQQLRPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + S + + I+ L++ + +
Sbjct: 122 STLPLGQSTTPYQIYDAFFDVTKAAQGWDIETVKQSLHVLSQTIDQTYPHLSSALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + + ++ ++ + T Q +N +L N
Sbjct: 182 FSDTIGKRDEQVKHLLAQANQVASVLGDRSDQIDRLLVNTKTLLAAFNERGQAINALLGN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
I S + N H + + + Q+ D L + + K +
Sbjct: 242 IAAFSEQVKGLINDNPNLNHVLEQLRTVSDILVQRKDDLANGLTEVGKFLPSLNEAIASG 301
Query: 306 DSTSNMRSSISAIREITD 323
+ +++ +
Sbjct: 302 PFFKVVLHNLALYQISQP 319
>gi|119384013|ref|YP_915069.1| hypothetical protein Pden_1268 [Paracoccus denitrificans PD1222]
gi|119373780|gb|ABL69373.1| Mammalian cell entry related domain protein [Paracoccus
denitrificans PD1222]
Length = 155
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 5/111 (4%)
Query: 24 SIYWLSRSNQYD---GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+ W + ++ E+ P +VDG+ + VR G+ VGR+ + L+ + H
Sbjct: 23 FLVWSTTGSRLGVSLAGGYELRAAFP-NVDGIEVGTDVRVAGVRVGRVSAVDLNPQTY-H 80
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ A+ + L + A I++ GL G YIEL E
Sbjct: 81 AEARLRLPDSIRLPSDSAALIQSDGLLGGAYIELQPGGAPDNLAPGDEIED 131
>gi|296171127|ref|ZP_06852579.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894317|gb|EFG74071.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 479
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 48/151 (31%), Gaps = 5/151 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
S+ + +FV+ L + ++ + V + +P GL +V +
Sbjct: 5 SRRILIQLAVFVIVALAGGAVMAFGYIQLPAMFGVGRYRVTVELPQ-AAGLYPSGNVTYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A ++ + A + +Q G Y+ L
Sbjct: 64 GTEVGRVESVRL---TDTGVAAVLSLKSGIDIPSDLDAQVHSQSAVGEQYVALLPRADSP 120
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAE 152
++ ++ + ++ +
Sbjct: 121 PLRDGDVIRPDRVSVPPDLDTMLDAANRGLQ 151
>gi|289627427|ref|ZP_06460381.1| PqiB family protein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646132|ref|ZP_06477475.1| PqiB family protein [Pseudomonas syringae pv. aesculi str. 2250]
gi|330866703|gb|EGH01412.1| PqiB family protein [Pseudomonas syringae pv. aesculi str. 0893_23]
Length = 559
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/404 (6%), Positives = 87/404 (21%), Gaps = 35/404 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S + + I VG++VG L ++ D + T +
Sbjct: 172 TDDLGSLDIGSPIYYRRIQVGQVVGYELSKDGRGVDIQIFINAPNDQYITTDTRFWNASG 231
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I + +
Sbjct: 232 VDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKLADENAEFKI------------- 278
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ ++ + V + +
Sbjct: 279 -----------FDDQATALAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVD 327
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D K I ++ + ++ + F G +
Sbjct: 328 LDYDPATKTFPGIVGAVIYPKRLGAAESKLQELGGKGDEEEQSARVLGAFVANGLRAQVR 387
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-N 343
+ + + + + + + +E ++ +
Sbjct: 388 NGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSKLPID 447
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+ ++ +S++ +S+ + + T N
Sbjct: 448 ELAKNLNGSLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE--------DSP 498
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 499 ARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
>gi|58040553|ref|YP_192517.1| hypothetical protein GOX2125 [Gluconobacter oxydans 621H]
gi|58002967|gb|AAW61861.1| Hypothetical protein GOX2125 [Gluconobacter oxydans 621H]
Length = 319
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/311 (12%), Positives = 89/311 (28%), Gaps = 18/311 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG FV+ + + + + ++ G+ GLS S V F
Sbjct: 1 MNRQA---LVGAFVLGGTGLIVAAFVLFGNFHPF-TRTEKAVLVFHGASSGLSVGSPVTF 56
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELST 116
G+ VG + + ++ + IRPD L ST + L
Sbjct: 57 RGVQVGAVDRVVIEYNPATKDAYIPVFVTIRPDNIVLTSSTHHRPGMEELVQQGLRGEMN 116
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
L+ +I + P + ++ S + + E
Sbjct: 117 LKSFVTGTSEIDLDFAPSTPAVLHPDIARITEIPTKQSTIAAMTQSLQDLPLKQIGENAD 176
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + + + + + + D+ + + D ++ +
Sbjct: 177 ATLASVRQLSDQLDRELPALVQSI----------RDTSDHSRDMVDAARKTVTDLEPVLT 226
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + + ++ + + + Q + ++ + S S+ + E
Sbjct: 227 RTLLSVDRLANEGATQLNARGHELHAVLQNSNDAVQQASKSLANLESMTSPRSADRANLE 286
Query: 297 TSAFLENIADS 307
S A S
Sbjct: 287 ASLRDIAAAAS 297
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/251 (8%), Positives = 88/251 (35%), Gaps = 11/251 (4%)
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ T + +++ + + + V Q L + +S+
Sbjct: 68 VIEYNPATKDAYIPVFVTIRPDNIVLTSSTHHRPGMEELVQQGLRGEMNLKSFVTGTSEI 127
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
++ +I S ++ +S + + ++ + + S
Sbjct: 128 DLDFAPSTPAVLHPDIARITEIPTKQSTIAAMTQSLQDLPLKQIGENADATLASVRQLSD 187
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQK--------FAELMSKINNIS--ALKENNSLF 369
++ + ++ +I + + ++ D+++K + ++ ++ + N+
Sbjct: 188 QLDRELPALVQSIRDTSDHSRDMVDAARKTVTDLEPVLTRTLLSVDRLANEGATQLNARG 247
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
+ + D ++ ++ + ++ ++ + + +++ +R + + +
Sbjct: 248 HELHAVLQNSNDAVQQASKSLANL-ESMTSPRSADRANLEASLRDIAAAASALRGFATDV 306
Query: 430 ERNPQDIVWGR 440
ERNPQ ++ GR
Sbjct: 307 ERNPQLLLTGR 317
>gi|330987376|gb|EGH85479.1| PqiB family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 559
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/404 (7%), Positives = 87/404 (21%), Gaps = 35/404 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S + + I VG++VG L ++ D + T +
Sbjct: 172 TDDLGSLDIGSPIYYRRIQVGQVVGYELSKDGRGVDIQIFINAPNDQYITTDTRFWNASG 231
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I + +
Sbjct: 232 VDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKLADENAEFKI------------- 278
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ ++ + V + +
Sbjct: 279 -----------FDDQATALAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVD 327
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D K I ++ + ++ + F G +
Sbjct: 328 LDYDPATKTFPGIVGAVIYPKRLGAAESKLQELGGKGDEEEQSARVLGAFVANGLRAQVR 387
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-N 343
+ + + + + + + +E ++ +
Sbjct: 388 NGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSKLPID 447
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
D ++ +S++ +S+ + + T N
Sbjct: 448 DLAKNLNGSLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE--------DSP 498
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 499 ARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
>gi|282858610|ref|ZP_06267772.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
gi|282588614|gb|EFB93757.1| conserved hypothetical protein [Prevotella bivia JCVIHMP010]
Length = 326
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/320 (12%), Positives = 89/320 (27%), Gaps = 10/320 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ L V + FF + +L + + P ++ + G++ +S+ NG+ VG
Sbjct: 8 EIKIALVAVLAIVVLFFGLQFLKGLSLFSHPA-RYQMKFSD-ISGIAPTTSIFANGVKVG 65
Query: 67 RIVGLFLDQEYP-NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
+ + D + P + I L T A I + + + +
Sbjct: 66 TVKRINYDYDNPNGPIMVDVDIDAGMKLPEDTHADIISDLMGNAKVNLIVGKSRNF---- 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
E N + + K + + + + P +
Sbjct: 122 ---LEENGVINGQINAGALGQMKTMIPYVEKMLPKLDSILAHVNSLLADPAMKGTLHNVD 178
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
T + + + T +T+ + + I + N
Sbjct: 179 KITADLTTSTKQLNAIMAQVNIALPGLTSKTNTLLTNANSVMTNANNGIQDVRGAMKGAN 238
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
++ N S + T+ V T + K++ M L N
Sbjct: 239 TMITHLNNQLSGIDLQATMAKVNTTIDHVNSLTAKLNSNQGSLGLLMNDPTLYHNLNNAM 298
Query: 306 DSTSNMRSSISAIREITDQR 325
S ++ +++ A +
Sbjct: 299 VSADSLLTNLKAHPKRYVHF 318
>gi|170721755|ref|YP_001749443.1| hypothetical protein PputW619_2580 [Pseudomonas putida W619]
gi|169759758|gb|ACA73074.1| Mammalian cell entry related domain protein [Pseudomonas putida
W619]
Length = 551
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/414 (9%), Positives = 97/414 (23%), Gaps = 33/414 (7%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
Y P + + L S V F IPVG++V LD++ D
Sbjct: 161 YGEPGKHFTLH-TQDLGSLDIGSPVYFRKIPVGQVVAYALDKDGKGVDVEVFVHAPNDAF 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ +T I E T S + +
Sbjct: 220 VTANTR----------------------FWNASGIDVEVGANGFALKTESLSSILVGGIA 257
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ + + + +
Sbjct: 258 FRAPDFNPNDTVASEDQRFELFADQNSALAPPAGKAQYLALRFDQAMRGLKVDAPVEFLG 317
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ +L + + I+ Q K + + +D +
Sbjct: 318 VEIGRVVSVNLDFDEKQRSFPV----NVGIVIYPQRLGRAHEKMLKALQHDPNDEASAAK 373
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ L + S + + +A + + +
Sbjct: 374 LMGTFID--NGLRAQARSGNLLTGQLYIALDFFPKAEKVAFDPTARPVMIPTVPGSLELL 431
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + + S ++ ++ SL + + + + T +++ + S
Sbjct: 432 QEQLQTMVDKVNRLP-LERIASNLDANL-VELRKSLTQFNGKTLPGVQSTLAEVSTTLKS 489
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ L S + + +L + + RNP+ ++ GR +
Sbjct: 490 ANSTLAEDSPQ-REQLTQTLDELGRMSRSLRELADYLGRNPESLIRGRPDNAAP 542
>gi|118471570|ref|YP_887180.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118172857|gb|ABK73753.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 495
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 57/152 (37%), Gaps = 5/152 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + +F ++ + S ++ +L + V + +P S GL S+V
Sbjct: 1 MITRFIRTQLIIFTITSVVASAMMVFSYLQAPVLFGIGRITVTLELP-STGGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ GI VG++ + + +LA ++ + A +R+ G Y++L
Sbjct: 60 YRGIEVGKVTDVRPTRSG---ALATLSLQTSPRIPADLQADVRSVSAVGEQYVDLRPRTD 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + + + + +S
Sbjct: 117 DAPYLQDGSVITAANTSVPQKVGPMLDQMSAL 148
>gi|226349633|ref|YP_002776747.1| putative Mce family protein [Rhodococcus opacus B4]
gi|226245548|dbj|BAH55895.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 332
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/296 (10%), Positives = 88/296 (29%), Gaps = 14/296 (4%)
Query: 1 MESKN----YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M +K+ +G+ +L GL
Sbjct: 1 MATKSFLERNPIRLGVIGTLVLVGVLAVALNFDTIPGIGPKTYHAEFL---DASGLVVGD 57
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELS 115
+ + G+ VG++ + L+ + + D L T A I+ + G YIEL+
Sbjct: 58 TAQIAGVKVGKVREISLNGD---KVEVEFDADSGDARLGNDTRAAIKVETALGRRYIELT 114
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + T S ++ + +S + + + E +
Sbjct: 115 PEGEGELGRGDTIPVSRTTSGYDVTRSLEEVTDKVSKTDTVDLSGALDQLSAVEEALPPD 174
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L +++ + +S +A+ + + ++ T ++
Sbjct: 175 LKSSLTGLSRLSETVASRDADLRHLLTNTAGVSTVLAERSQRVAALLGQGQSLFDSLNQR 234
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+++IL + ++ + + T + + +++ + ++
Sbjct: 235 ADSIHRILVQTREIADELTALKR---DNEATLAPTLEQMDTLVTTLNNNYDNINAS 287
>gi|66047366|ref|YP_237207.1| hypothetical protein Psyr_4139 [Pseudomonas syringae pv. syringae
B728a]
gi|71735731|ref|YP_276265.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|257483484|ref|ZP_05637525.1| toluene tolerance protein Ttg2C, putative [Pseudomonas syringae pv.
tabaci ATCC 11528]
gi|289676092|ref|ZP_06496982.1| toluene tolerance protein Ttg2C, putative [Pseudomonas syringae pv.
syringae FF5]
gi|302185304|ref|ZP_07261977.1| toluene tolerance protein Ttg2C, putative [Pseudomonas syringae pv.
syringae 642]
gi|63258073|gb|AAY39169.1| Mce4/Rv3499c/MTV023.06c protein [Pseudomonas syringae pv. syringae
B728a]
gi|71556284|gb|AAZ35495.1| toluene tolerance protein Ttg2C, putative [Pseudomonas syringae pv.
phaseolicola 1448A]
gi|320322485|gb|EFW78578.1| toluene tolerance protein Ttg2C, putative [Pseudomonas syringae pv.
glycinea str. B076]
gi|320330046|gb|EFW86033.1| toluene tolerance protein Ttg2C, putative [Pseudomonas syringae pv.
glycinea str. race 4]
gi|330875107|gb|EGH09256.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv. glycinea
str. race 4]
gi|330895264|gb|EGH27602.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv. japonica
str. M301072PT]
gi|330937996|gb|EGH41777.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv. pisi str.
1704B]
gi|330950263|gb|EGH50523.1| toluene tolerance protein Ttg2C [Pseudomonas syringae Cit 7]
gi|330969695|gb|EGH69761.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv. aceris
str. M302273PT]
gi|330981136|gb|EGH79239.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv. aptata
str. DSM 50252]
gi|330987099|gb|EGH85202.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv.
lachrymans str. M301315]
gi|331011543|gb|EGH91599.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv. tabaci
ATCC 11528]
Length = 155
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ T VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ I+ L +TA+I T GL G YI LS
Sbjct: 61 AGVTIGKVTAIDLDRDTFTG-RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGD 119
Query: 120 EKKTIFQIATERNQ 133
+K Q
Sbjct: 120 DKLLKDGGTIHDTQ 133
>gi|332041055|gb|EGI77423.1| hypothetical protein HGR_06461 [Hylemonella gracilis ATCC 19624]
Length = 156
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 1/117 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME VGLFV+ L F + + + + +V GL ++V+
Sbjct: 1 MERSKNDVWVGLFVLLGLAALVFLALQAANLLHLSFQSSYRVEAMFDNVGGLKPRAAVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VGR+ G+ D + + + + ++ I T GL G YI +
Sbjct: 61 GGVVVGRVAGISFD-DKSFQARVRIDLENRYKFPKDSSLKILTSGLLGDQYIGIEAG 116
>gi|298486743|ref|ZP_07004799.1| Paraquat-inducible protein B [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298158610|gb|EFH99674.1| Paraquat-inducible protein B [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 559
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/404 (6%), Positives = 87/404 (21%), Gaps = 35/404 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S + + I VG++VG L ++ D + T +
Sbjct: 172 TDDLGSLDIGSPIYYRRIQVGQVVGYELSKDGRGVDIQIFINAPNDQYITTDTRFWNASG 231
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I + +
Sbjct: 232 VDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKLADENAEFKI------------- 278
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ ++ + V + +
Sbjct: 279 -----------FDDQATALAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVD 327
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D K I ++ + ++ + F G +
Sbjct: 328 LDYDPATKTFPGIVGAVIYPKRLGAAESKLQELGGKGDEEEQSARVLGAFVANGLRAQVR 387
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-N 343
+ + + + + + + +E ++ +
Sbjct: 388 NGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSKLPID 447
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+ ++ +S++ +S+ + + T N
Sbjct: 448 ELAKNLNGSLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE--------DSP 498
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 499 ARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
>gi|145224740|ref|YP_001135418.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315445070|ref|YP_004077949.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|145217226|gb|ABP46630.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315263373|gb|ADU00115.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 341
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 84/286 (29%), Gaps = 8/286 (2%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
F + + + + + QY V + V L SVRF G+ +G + L
Sbjct: 11 FALFVTVMALLTGCLFAVFGQYRSGSTNVYSAVFKDVSNLRAGESVRFAGVRIGTVKDLS 70
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + L T A +R L G ++EL + + A
Sbjct: 71 MQPD--KTVVVTFDAERGLVLTSGTRAVVRYLNLVGDRFLELVDDEGSTRILPAGARIPV 128
Query: 133 QRAMITATPSGINYFISN------AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
++ + + A+ + + + +Q +E L+ T + +
Sbjct: 129 EQTAPALDLDLLLGGLKPVIKGLDAQEVNNLSAALIQIVQGQGGTLESLLSRTSSFSNAL 188
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ I + T D + T + + + ++ +
Sbjct: 189 ADRTEVIDRLIVNLQTTLGTLADQRDDFSEGLTRLHRLVTELSAERQPIGAAIDSLSAGT 248
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
S+ + + +TV + + +++ +S
Sbjct: 249 ASLSDLLTDTRPPLADTVDQLHRLAPNLESKLDRLETAISKAPENY 294
>gi|296394450|ref|YP_003659334.1| mammalian cell entry-like domain-containing protein [Segniliparus
rotundus DSM 44985]
gi|296181597|gb|ADG98503.1| Mammalian cell entry related domain protein [Segniliparus rotundus
DSM 44985]
Length = 347
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/296 (12%), Positives = 93/296 (31%), Gaps = 12/296 (4%)
Query: 2 ESKNYYTS--VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
E + + FVV+++ +Y+ Y +V + GL + SVR
Sbjct: 13 ERRFQLVLGVIAAFVVTVILAGTAIVYFF----PYGEKRYQVRQYVS---GGLKSGDSVR 65
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + L+ + H L K I D + ++ ++ G Y++L K
Sbjct: 66 MAGVEIGQVRSVALEGD---HVLVKFDINNDIRVGDQSSTEVKLLTPIGGHYLDLKLKGK 122
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
E I ER+ +S + N+
Sbjct: 123 EPLGDKTIPVERSHSPFDEFGDDKPQDPLSERKPWEVLDVVDKATGTIQQINVGNLHKVL 182
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + + ID + + ++ M K + Q +
Sbjct: 183 DIVTKALDSQPDVIRVTIDAFAKVIDLLISREEQLRQAVSVVHEYLKEFGMEKDMLRQTL 242
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + V S + + + + ++ + + ++ + ++D +++
Sbjct: 243 HNFAKTGVVFSKMQDEFPEMLDLFSYFIKFLARPVFALENRVTNPIADIEDLLENL 298
>gi|330890321|gb|EGH22982.1| PqiB family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 559
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 29/404 (7%), Positives = 87/404 (21%), Gaps = 35/404 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S + + I VG++VG L ++ D + T +
Sbjct: 172 TDDLGSLDIGSPIYYRRIQVGQVVGYELSKDGRGVDIQIFINAPNDQYITTDTRFWNASG 231
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I + +
Sbjct: 232 VDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKLADENAEFKI------------- 278
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ ++ + V + +
Sbjct: 279 -----------FDDQATALAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVD 327
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D K I ++ + ++ + F G +
Sbjct: 328 LDYDPATKTFPGIVGAVIYPKRLGAAESKLQELGGKGDEEEQSARVLGAFVANGLRAQVR 387
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-N 343
+ + + + + + + +E ++ +
Sbjct: 388 NGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSKLPID 447
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
D ++ +S++ +S+ + + T N
Sbjct: 448 DLAKNLNGSLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE--------DSP 498
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 499 ARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
>gi|169631229|ref|YP_001704878.1| MCE-family protein [Mycobacterium abscessus ATCC 19977]
gi|169243196|emb|CAM64224.1| Hypothetical MCE-family protein [Mycobacterium abscessus]
Length = 356
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 84/284 (29%), Gaps = 11/284 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F ++++ + + + + S GL + +V +GI VG+
Sbjct: 14 VRTGIFGIAVVSMLVLVAFGYTGL-PFWPQGKQYTGYFADS-GGLESGGNVFVSGIKVGQ 71
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L + L + A IRT + G + ++
Sbjct: 72 VKDVSLAGN---KVRVDFTVDRSIRLGDQSLAAIRTTTVLGEKSLSVTPAGAG----RIT 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ S ++ ++A K + +Q I E + ++ ++
Sbjct: 125 EIPLGRTTTPYTLNSALSDLGASAGGIDKA--QLDQSLQVITEAMRDATPQLRGALDGVA 182
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
++ + + S + + + + + A ++ I E I
Sbjct: 183 SLSRTLNARDAALEQLLTHAKSVSGILSERAGQVNKLVTDGNQLFAALDERRLAISELIN 242
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ S V + + R T + V + + S
Sbjct: 243 RIQGLSQQISGFVADNRQEFRPTMEKLSVVLDDLLDRKAHISEA 286
>gi|332107649|gb|EGJ08873.1| putative ABC transporter substrate-binding protein [Rubrivivax
benzoatilyticus JA2]
Length = 164
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 35/93 (37%), Gaps = 2/93 (2%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
S G + R ++ GL + VR G+ VGR+ + LD + + I
Sbjct: 32 GSFSSSGATYALTARF-DNIGGLKARAPVRSAGVVVGRVKSISLDPQTFQGV-VEMDIDQ 89
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ A I T GL G YI L ++
Sbjct: 90 RFQFPKDSAAKILTSGLLGDQYIGLEPGGDDQN 122
>gi|71737702|ref|YP_274409.1| PqiB family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|71558255|gb|AAZ37466.1| PqiB family protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320328791|gb|EFW84790.1| PqiB family protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 559
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/404 (6%), Positives = 87/404 (21%), Gaps = 35/404 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S + + I VG++VG L ++ D + T +
Sbjct: 172 TDDLGSLDIGSPIYYRRIQVGQVVGYELSKDGRGVDIQIFINAPNDQYITTDTRFWNASG 231
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I + +
Sbjct: 232 VDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKLADENAEFKI------------- 278
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ ++ + V + +
Sbjct: 279 -----------FDDQATALAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVD 327
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D K I ++ + ++ + F G +
Sbjct: 328 LDYDPATKTFPGIVGAVIYPKRLGAAESKLQELGGKGDEEEQSARVLGAFVANGLRAQVR 387
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-N 343
+ + + + + + + +E ++ +
Sbjct: 388 NGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSKLPID 447
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+ ++ +S++ +S+ + + T N
Sbjct: 448 ELAKNLNGSLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE--------DSP 498
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 499 ARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
>gi|326799936|ref|YP_004317755.1| hypothetical protein Sph21_2534 [Sphingobacterium sp. 21]
gi|326550700|gb|ADZ79085.1| Mammalian cell entry related domain protein [Sphingobacterium sp.
21]
Length = 323
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 83/297 (27%), Gaps = 5/297 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ T VG+ + +L ++ + VDGLS V NG
Sbjct: 4 SNETKVGILATVAIAVLIIGYSFLKGNDVFTSENKFYASY--DRVDGLSVSKPVMVNGYQ 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+GR+ + L L + I D + +T A I + L G I +
Sbjct: 62 IGRVSKMSLQPN--GEILTEFKINQDYAIPANTIARIASTDLLGGKAIVFELGDSKDYAQ 119
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
N + I + + S + +
Sbjct: 120 DGDTLRANIQRNILEQVEPVQKKAEAVVAVLDSVLSSINNTINADFQRNFNRSIASIANT 179
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ T+++ S+ ++ + + ++ ++
Sbjct: 180 LNTLEHTTAQVDAIVGTQRTKLSNILSNVESISANFKNNGERITSILTNMESVTDQVAKA 239
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
N Q + N + + + V ++ + + + L ++ ++ K+ +
Sbjct: 240 NFQQTIQNANAAVADLQHIVDNINNGKGSVGLLLND-EELYNNLNNASKNLDCLMID 295
>gi|320324683|gb|EFW80757.1| PqiB family protein [Pseudomonas syringae pv. glycinea str. B076]
Length = 559
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/404 (6%), Positives = 87/404 (21%), Gaps = 35/404 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S + + I VG++VG L ++ D + T +
Sbjct: 172 TDDLGSLDIGSPIYYRRIQVGQVVGYELSKDGRGVDIQIFINAPNDQYITTDTRFWNASG 231
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I + +
Sbjct: 232 VDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKLADENAEFKI------------- 278
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ ++ + V + +
Sbjct: 279 -----------FDDQATALAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVD 327
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D K I ++ + ++ + F G +
Sbjct: 328 LDYDPATKTFPSIVGAVIYPKRLGAAESKLQELGGKGDEEEQSARVLGAFVANGLRAQVR 387
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-N 343
+ + + + + + + +E ++ +
Sbjct: 388 NGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSKLPID 447
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+ ++ +S++ +S+ + + T N
Sbjct: 448 ELAKNLNGSLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE--------DSP 498
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 499 ARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
>gi|226349632|ref|YP_002776746.1| putative Mce family protein [Rhodococcus opacus B4]
gi|226245547|dbj|BAH55894.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 369
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/361 (13%), Positives = 105/361 (29%), Gaps = 15/361 (4%)
Query: 1 MESKNY---YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M ++ + L VV + + W++ + I S GL
Sbjct: 2 MATRTTSRVPAKILLLVVIVAALVLGTGAWVTGHS------THHITAFFRSTSGLYVGDR 55
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V G+ VG+I + + + + + A I L YI+L+
Sbjct: 56 VMILGVEVGQINDIVPEGD---QVRVEFSYDGKYDVPADAKAAIVAPVLVTGRYIQLAPA 112
Query: 118 RKEKKTIFQIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ T + A+ + A++ + D + + + N L
Sbjct: 113 YVGGDKMADGQTIPVERTAVPVEFDEVKEQVVKLAQDVGRTPEDPDGSLNRFVTNTADAL 172
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ L++ S + K + + + + + + A
Sbjct: 173 RGNGQTLHDSLVQLSDATSTLSKGGEDLFASVRNLQTFTSALATNEQQITAFSRELATTS 232
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK- 295
+N + N+ + + ++V + + R T + L D + S
Sbjct: 233 SMLNDNRTELDALLNSMLATFNEVTAFLQNNRGALTTDVGKLTDLTRQLVDREDTLASIL 292
Query: 296 -ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
L N + +S++A ++D S I + + D K ++
Sbjct: 293 HTAPTSLSNFYNIYDPDSNSLTAAIAVSDLPPDPRSLICALLTTANAPADECSKATGALA 352
Query: 355 K 355
Sbjct: 353 T 353
>gi|92114130|ref|YP_574058.1| hypothetical protein Csal_2008 [Chromohalobacter salexigens DSM
3043]
gi|91797220|gb|ABE59359.1| Mammalian cell entry related protein [Chromohalobacter salexigens
DSM 3043]
Length = 547
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/395 (10%), Positives = 109/395 (27%), Gaps = 30/395 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L + + G VGR+ D E D + +T I + +
Sbjct: 170 LRAGDPITYQGFTVGRVENTEFDPEEKEMRHRLYIQSPYDVLVTDTTRFWISSGVDVRLD 229
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ +++ E+ + S ++
Sbjct: 230 SQGFRVNVESMESLIGGGVTFGVP-----------------EDVAMGHPAESEATYQLFS 272
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ E T ++ + + + + + +
Sbjct: 273 DEESAREGTFDRYLEYVLLVDDTVRGLSRGDSVEYRGVRVGTVEAVPWRFSAPQPDTLNR 332
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L ++ + +++ + ++ T + L D +
Sbjct: 333 FAIPVLIRIEPQRFDDAMANFDAEDWRARLERMFEHGLRATLKAGNLLT--GALFVDLNF 390
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + A + I + ++ + +E I ++LND+
Sbjct: 391 RDDPEPYEALTFEGKTVFPTTSGGFAQIEQKVSNLLDKLNEL-EVEPILTSLNDTLTTTR 449
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS--QSGLNDI 408
M K+N+I+ + L D R+ + +N + + LQ FS G ++
Sbjct: 450 ATMRKVNDIANSVDT--LLND-----PATRELPQNLNETLRQTRDTLQGFSPDSQGYREL 502
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ + +L+ + + P +++ RE+
Sbjct: 503 NDTLSRLESLMRDLQPVVRTLSEKPNALIFDREET 537
Score = 51.1 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 24/90 (26%), Gaps = 9/90 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-------FLDQEYPNHSLAKALI 87
E ++ + +V GLS SV + G+ VG + + D I
Sbjct: 282 FDRYLEYVLLVDDTVRGLSRGDSVEYRGVRVGTVEAVPWRFSAPQPDTLNRFAIPVLIRI 341
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTL 117
P + A +
Sbjct: 342 EPQR--FDDAMANFDAEDWRARLERMFEHG 369
Score = 36.4 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 43/453 (9%), Positives = 118/453 (26%), Gaps = 36/453 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + L + GP + ++ + +G+ + ++ + VGR+ + L
Sbjct: 21 IVPLVAVLIGAWMLYDNLSALGPTITLEMK---NAEGIEAGKTLIKTRNVEVGRVEDVTL 77
Query: 74 DQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGLA--GITYIELSTLRKEKKTIFQIATE 130
++ + + A+ + L + + GI+ + + +
Sbjct: 78 SEDMSHTIITARMKPDTERMLNDEARFWVVKPRIDREGISGLGTVLSGAYIQLLPGNGET 137
Query: 131 RNQRAMITATPSGINYFISNAENTSKK---ISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + P S + + T + E
Sbjct: 138 AQREFEVLDQPPVAPPDAPGIRVNLVSKVGSSLRAGDPITYQGFTVGRVENTEFDPEEKE 197
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
I ++ T S + +++ M I + E++
Sbjct: 198 MRHRLYIQSPYDVLVTDTTRFWISSGVDVRLDSQGFRVNVESMESLIGGGVTFGVPEDVA 257
Query: 248 VSSNNFVKSSDQVINTVHDVRE-TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ +++ Q+ + RE T + E +D + S + + +
Sbjct: 258 MGHPAESEATYQLFSDEESAREGTFDRYLEYVLLVDDTVRGLSRGDSVEYRGVRVGTVEA 317
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS--QKFAELMS-KINNISALK 363
+ I ++ +N + + + +
Sbjct: 318 VPWRFSAPQPDTLNRFAIPVLIRIEPQRFDDAMANFDAEDWRARLERMFEHGLRATLKAG 377
Query: 364 EN------------------NSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS---- 401
+L + + T +I + + ++ + L
Sbjct: 378 NLLTGALFVDLNFRDDPEPYEALTFEGKTVFPTTSGGFAQIEQKVSNLLDKLNELEVEPI 437
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ LND R VN + ++ +P
Sbjct: 438 LTSLNDTLTTTRATMRKVNDIANSVDTLLNDPA 470
>gi|253687837|ref|YP_003017027.1| Mammalian cell entry related domain protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754415|gb|ACT12491.1| Mammalian cell entry related domain protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 547
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/394 (8%), Positives = 98/394 (24%), Gaps = 33/394 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L + S V + IPVGR+ L+++ + + + D P
Sbjct: 167 DDLGSLDSGSPVYYRRIPVGRVASYQLNRDGRS---VQLQVFIDAP-------------- 209
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y T + + T + ++ + + +
Sbjct: 210 ----YDRFVTPNTRFWNASGVDLSVDANGFRLKTQTLAAVMAGGIAFSTPDLDSTIARPE 265
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + + ++ + + +
Sbjct: 266 PLTTYKLASDRESALSPPDGPP-----------ILFKLRFDRSLHGLEIGAPVEFSSVKI 314
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+D K + + + + Q E + +
Sbjct: 315 GHVTTIELDYSKTGYRFPTVVSIEVFPNRLGNVLDKLPKSTTSLEQQTAEFTRDLVEHGL 374
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ T ++ + + S +
Sbjct: 375 RAQVAPSNLLTGQLYISLDFVPDAAKVPFDINARPLVLPTVNGGFDRLQTQMASIIGKID 434
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + + N + ++ N +L + + + + + + L++ S L+
Sbjct: 435 NLPLDAIGRNMNTTLVEANKALRQVNGQTLPEANRLMKNMQLAARRAQDVLEDDSPMQLS 494
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
I ++++Q T+ +R+P+ ++ GR
Sbjct: 495 -ITQSLQEMQRTLRALRSLAEQIDRHPESLLQGR 527
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/65 (21%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKA 85
S + DGP +R S+ GL + V F+ + +G + + LD + ++
Sbjct: 278 SALSPPDGPPILFKLRFDRSLHGLEIGAPVEFSSVKIGHVTTIELDYSKTGYRFPTVVSI 337
Query: 86 LIRPD 90
+ P+
Sbjct: 338 EVFPN 342
Score = 47.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 6/77 (7%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQ 75
L + + + G E+++ S GL + V++ + VG + + L Q
Sbjct: 26 ALAMLTGLAMLI---HTWSGTGPEIVVSF-QSATGLEAGRTIVKYKDVAVGTVKDISLSQ 81
Query: 76 EYPNHSLAKALIRPDTP 92
+ N L + +
Sbjct: 82 DS-NQVLVTVQLNKNAE 97
>gi|148284857|ref|YP_001248947.1| putative ABC transporter substrate binding protein [Orientia
tsutsugamushi str. Boryong]
gi|146740296|emb|CAM80677.1| putative ABC transporter substrate binding protein [Orientia
tsutsugamushi str. Boryong]
Length = 161
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/123 (21%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T VG V+ + + Y + + +V+GL+ SSV +GI +G
Sbjct: 7 ETFVGFCVMLFVTLCIYFGYKTYNDYYIKDNNFKTVFATFQNVEGLNKGSSVFVSGIKIG 66
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ L L + A+ + D L + A I +GL G YI + +E +
Sbjct: 67 TVEKLTLVPSSFD-VAAELKLSADINLPNDSQAIIMNRGLLGEKYITIIPGVEENYIADK 125
Query: 127 IAT 129
Sbjct: 126 GEI 128
>gi|300789437|ref|YP_003769728.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299798951|gb|ADJ49326.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 331
Score = 76.1 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 6/105 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+VG ++ + S G GL + VR G+ V
Sbjct: 8 NPIAVGAVTALVMA-LIGGATFFSDDLPVIGGGTTYRAEFHE-AAGLRPNDEVRVAGVKV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G + + L + H + +T + TTA I+ + L G
Sbjct: 66 GEVTDVRLAGD---HVEVLFRV-RETWVGDRTTAAIKIKTLLGQK 106
>gi|254773842|ref|ZP_05215358.1| hypothetical protein MaviaA2_04077 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 576
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/285 (8%), Positives = 78/285 (27%), Gaps = 13/285 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F+++ + +++ V + +P + GL S+V
Sbjct: 1 MLTRFVRIQLAIFLIAGTIGVISMVLFYIQAPTLLGIGRMTVTLELPAT-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G++ + L A + + TA + + G Y++L
Sbjct: 60 YRGVQLGKVTAVGLTPSG---VKATLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPRTN 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + I + ++ + K +
Sbjct: 117 SPPYLHDGSVIAMRDTKIPQPVGPMLDQVNALVQSIPKTKLGQLLDESFQGFNGSGYD-- 174
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++ ++ + T ++ T +
Sbjct: 175 ------LGSLIDSSQTLSRDANGVVDRTRALTEDTGPLLDTQAQTTDSIRTWARSFAGIS 228
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ ++ N K + + + T + + +
Sbjct: 229 DVMVNNDSHFRTILEKGPETANEASRLLDQIKPTLPVLLANLTTI 273
>gi|118463631|ref|YP_880213.1| mce-family protein mce1f [Mycobacterium avium 104]
gi|118164918|gb|ABK65815.1| mce-family protein mce1f [Mycobacterium avium 104]
Length = 575
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/285 (8%), Positives = 78/285 (27%), Gaps = 13/285 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F+++ + +++ V + +P + GL S+V
Sbjct: 1 MLTRFVRIQLAIFLIAGTIGVISMVLFYIQAPTLLGIGRMTVTLELPAT-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G++ + L A + + TA + + G Y++L
Sbjct: 60 YRGVQLGKVTAVGLTPSG---VKATLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPRTN 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + I + ++ + K +
Sbjct: 117 SPPYLHDGSVIAMRDTKIPQPVGPMLDQVNALVQSIPKTKLGQLLDESFQGFNGSGYD-- 174
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++ ++ + T ++ T +
Sbjct: 175 ------LGSLIDSSQTLSRDANGVVDRTRALTEDTGPLLDTQAQTTDSIRTWARSFAGIS 228
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ ++ N K + + + T + + +
Sbjct: 229 DVMVNNDSHFRTILEKGPETANEASRLLDQIKPTLPVLLANLTTI 273
>gi|41406863|ref|NP_959699.1| hypothetical protein MAP0765 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395213|gb|AAS03082.1| hypothetical protein MAP_0765 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 576
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/285 (8%), Positives = 78/285 (27%), Gaps = 13/285 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F+++ + +++ V + +P + GL S+V
Sbjct: 1 MLTRFVRIQLAIFLIAGTIGVISMVLFYIQAPTLLGIGRMTVTLELPAT-GGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G++ + L A + + TA + + G Y++L
Sbjct: 60 YRGVQLGKVTAVGLTPSG---VKATLSLSTSPKVPADLTAEVLSVSAVGEQYVDLRPRTN 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + I + ++ + K +
Sbjct: 117 SPPYLHDGSVIAMRDTKIPQPVGPMLDQVNALVQSIPKTKLGQLLDESFQGFNGSGYD-- 174
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++ ++ + T ++ T +
Sbjct: 175 ------LGSLIDSSQTLSRDANGVVDRTRALTEDTGPLLDTQAQTTDSIRTWARSFAGIS 228
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ ++ N K + + + T + + +
Sbjct: 229 DVMVNNDSHFRTILEKGPETANEASRLLDQIKPTLPVLLANLTTI 273
>gi|118467050|ref|YP_884133.1| mce-family protein mce1c [Mycobacterium avium 104]
gi|118168337|gb|ABK69234.1| mce-family protein mce1c [Mycobacterium avium 104]
Length = 521
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/318 (11%), Positives = 94/318 (29%), Gaps = 6/318 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S G++T VR G+ V
Sbjct: 8 NRVRIGLMGIVVTVLVIGVGQSFTSVPMLFAKPSYYG-QFTDS-GGINTGDKVRIAGMDV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ GL +D + H + K I +T + + I+T + G +++ ++
Sbjct: 66 GKVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIKTDTILGKKILDVEARGSQQLRPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + S + + I+ L+ + +
Sbjct: 122 STLPLGQSTTPYQIYDAFFDVTKAAQGWDIETVKQSLHVLSQTIDQTYPHLSPALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + + ++ ++ + T Q +N +L N
Sbjct: 182 FSDTIGKRDEQVKHLLAQANQVASVLGDRSDQIDRLLVNTKTLLAAFNERGQAINALLGN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
I S + N H + + + Q+ D L + + K +
Sbjct: 242 IAAFSEQVKGLINDNPNLNHVLEQLRTVSDILVQRKDDLANGLTEVGKFLPSLNEAIASG 301
Query: 306 DSTSNMRSSISAIREITD 323
+ +++ +
Sbjct: 302 PFFKVVLHNLALYQISQP 319
>gi|262195119|ref|YP_003266328.1| hypothetical protein Hoch_1888 [Haliangium ochraceum DSM 14365]
gi|262078466|gb|ACY14435.1| Mammalian cell entry related domain protein [Haliangium ochraceum
DSM 14365]
Length = 529
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/354 (12%), Positives = 123/354 (34%), Gaps = 12/354 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S + VG+ V ++ ++ W + + G + + + GL S V
Sbjct: 1 MKSLSNGIKVGILFVVMVLGTYG--VWSAVTAPSSGEKSFELGAMFRDASGLPKGSRVVV 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG I+ L ++ ++ +R D P++ + ++ L G Y+EL
Sbjct: 59 AGLPVGEIIDLDIEG---RYARIGFRVREDLPVWSNAIVFKKSSSLLGDYYLELDPGTP- 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + ++ + ++I +S ++ ++ ++
Sbjct: 115 -EALDATGNIVTNTRLGADDTVATVVEATSPDELLRRIDESMPNVDNVLLSVRDLSEDLR 173
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ I + + + + + I ++ ++ I + +
Sbjct: 174 RVVNGPLLSVSERIDGLVQT-----ESETVARILERLDRSMVNIQAITNDVRDITGGRNS 228
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
QI ++ ++ + V++ +V +T +E +D ++++ SS +
Sbjct: 229 QIDRILEELEAASSEARNLVVSARTEVEQTGSKVREKLDMVDDIMANTSSITGKIDEDEG 288
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ + ++ I E + + T + S S +S
Sbjct: 289 TLGRLVNDPTIADNVEDITEDAKGFLDGLLNLQTYVGLRSEYTVGSGSLRSYVS 342
>gi|315443555|ref|YP_004076434.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261858|gb|ADT98599.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 503
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/298 (10%), Positives = 82/298 (27%), Gaps = 11/298 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ + + G ++ + + + + Q + P + VR
Sbjct: 2 MATRKRWVA-GTAILLAILLVTGAAFLV---RQVFFGPMTITAYFPT-ATAIYPGDEVRV 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY---IELSTL 117
+G+ VG I + + + D + + A I Q L Y
Sbjct: 57 SGVEVGTIDKIEPEGTQT---KMTLKVDRDVQIPANAKAVIVAQNLVAARYVQLTPAYRE 113
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + A+ + +E + S I + +++ +
Sbjct: 114 GDGATMADGGVIPKERTAIPVEWDEVKTQLMRLSEELGPQAGASGTSISRFVDSAANAME 173
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ L+ + + T + L + A
Sbjct: 174 GNGDKLRETLRQLSGAARIFAEGSGNIVDIIKNLQIFVTALRDSKDQIVLFQNRLATLTS 233
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
VN ++ + + + +V V R+ T ++ +L+D +++
Sbjct: 234 VVNDNRSDLDAALTDLSFAIGEVQRFVAGSRDATVEQIRSLGQVTQVLADNRLALENV 291
>gi|108801578|ref|YP_641775.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119870732|ref|YP_940684.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771997|gb|ABG10719.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119696821|gb|ABL93894.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 352
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G+F + ++ + + + G+ + V +GI
Sbjct: 7 ANPLRTGIFGIVLVTCLVLVSFGYTGL-PFFPQGKSYEAYFTD-AGGIIPGNDVNVSGIT 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VG++ G+ L + + + + + I+T + G
Sbjct: 65 VGKVDGVELAGD---VAKVNFTVDRKVRVGDQSMVAIKTDTVLGEK 107
>gi|114767024|ref|ZP_01445932.1| hypothetical protein 1100011001191_R2601_18433 [Pelagibaca
bermudensis HTCC2601]
gi|114540808|gb|EAU43872.1| hypothetical protein R2601_18433 [Roseovarius sp. HTCC2601]
Length = 149
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 44/123 (35%), Gaps = 3/123 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG V++ + + S++G++ S VR
Sbjct: 1 MTTSTTEVLVGGAVLAAAIAFGAYAVNTTGFE-LHETGYPLSASF-RSLEGVTVGSDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + L+ E + ++ D + + I ++GL G ++E+S
Sbjct: 59 AGVKVGTVTEISLNPETFR-ADMGMTLQDDILIPDDSAILISSEGLLGGNFVEISPGGSP 117
Query: 121 KKT 123
Sbjct: 118 FYY 120
>gi|152992581|ref|YP_001358302.1| hypothetical protein SUN_0988 [Sulfurovum sp. NBC37-1]
gi|151424442|dbj|BAF71945.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 546
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 50/409 (12%), Positives = 114/409 (27%), Gaps = 17/409 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ D ++R P + T + + I VGR+ + L + I
Sbjct: 151 RSDKNGEYFVLRTPRGDSAVKTGTPIYLKNIRVGRVEYVMLGLDD-VFVDVIVFIDKRYV 209
Query: 93 --LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
++ + +R+ A I L + Q A E + +
Sbjct: 210 PYVHTDSKFWVRSTLDAEIVNGSLDVNVAPVADLLQGAIEFSTTGRDANRTVPDTFAFLL 269
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+N S + H +K I+ +IA ++ S V + + T +
Sbjct: 270 HKNKSSVNTKKLGHEKKEIDFFMLHTEDSIAKLKIGSPVRYDGFKIGSVVEITLSYDKKT 329
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
T T D + + + + ++T+ +
Sbjct: 330 HKMNGTVLTEIDTS---------VFDDLSDANDTGRENLYRAVEEGLRARVDTIDPITGR 380
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ + + K T + + I + +
Sbjct: 381 LYVNLFFTDSDGNKSMEETGKYARIPTVRSVNGDMMAGLLKIMDKINRLPIEELVASLNK 440
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ E N N ++ + + +N ++ K + + A+ T + + +
Sbjct: 441 VVKESEKPVKNANVVLEELKKTVKNLNTLTGKKSFARMPDEVDNALKELTRTLKTTQKVV 500
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
GNN I ++ + +T + L R P +++G
Sbjct: 501 KGYGNN-----SLLSRQISETLKTVSKTSREMQEFLKMLNRKPNSLIFG 544
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 49/464 (10%), Positives = 127/464 (27%), Gaps = 41/464 (8%)
Query: 2 ESKNYY---TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SS 57
+K + + F+ I+ WL+ Y E+ I P + +GL S
Sbjct: 11 STKFNFFTSIWIVPFIALIIAG------WLA-YQYYSELGPEIKIIFPNN-EGLKAGQSQ 62
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+++ +PVG + + L ++ + A + Y + +A
Sbjct: 63 IKYKDVPVGTVRKITLQEDGNG-VVVIARMDKVAEPYLNDSAKFWIVKPELGVSGISGLD 121
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
IA+++ + S ++ + + + +
Sbjct: 122 TLISGNYIGIASKKGGILKKNFV-------------GMEHAYRSDKNGEYFVLRTPRGDS 168
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ + + +
Sbjct: 169 AVKTGTPIYLKNIRVGRVEYVMLGLDDVFVDVIVFIDKRYVPYVHTDSKFWVRSTLDAEI 228
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ N+ ++ + + R TF + K ++ + KE
Sbjct: 229 VNGSLDVNVAPVADLLQGAIEFSTTGRDANRTVPDTFAFLLHKNKSSVNTKKLGHEKKEI 288
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
F+ + DS + ++ + + T++ + + + +
Sbjct: 289 DFFMLHTEDSIAKLKIGSPVRYDGFKIGSVVEITLSYDKKTHKMNGTVLTEIDTSV--FD 346
Query: 358 NISALKENNSLFKDAQRAMHT-FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN------ 410
++S + ++ RA+ R + I+ + NL G ++
Sbjct: 347 DLSDANDTGR--ENLYRAVEEGLRARVDTIDPITGRLYVNLFFTDSDGNKSMEETGKYAR 404
Query: 411 --LVRKLQ-ETVNHFDDCLNNFERNP-QDIVWGREKGSVKIYKP 450
VR + + + ++ R P +++V K + KP
Sbjct: 405 IPTVRSVNGDMMAGLLKIMDKINRLPIEELVASLNKVVKESEKP 448
>gi|114328089|ref|YP_745246.1| ABC transporter substrate-binding protein [Granulibacter
bethesdensis CGDNIH1]
gi|114316263|gb|ABI62323.1| ABC transporter substrate-binding protein [Granulibacter
bethesdensis CGDNIH1]
Length = 323
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 92/285 (32%), Gaps = 13/285 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIPVGR 67
VG V++ + ++ + P E+ I +P + V GLS + V GI G
Sbjct: 27 WVGFLVLACIAVFAGAVIEAGFLRDWLKPPGELRILLPQTGVGGLSPGADVEVMGIHAGM 86
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG-LAGITYIELSTLRKEKKTIFQ 126
I + L+ + ++LA+ + + + + ATI+ + +AG ++ L+ +
Sbjct: 87 IRRMKLNADGEMYALAEIDPQAEPFIRQDSKATIKLRYAVAGAAFVSLTRGTGQPLDWNY 146
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
S S + K+ + Q I EN+ L +
Sbjct: 147 AVLSATTDQNPMEMLS------STITDIRKQALPLLHNAQMITENLNAILKNIRDGKGSA 200
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+L ++ + + + L+ S + L + N+
Sbjct: 201 GRLLTDDTLVKEAESSLASLQQAMARLDPIVEHADGLLAS-----TNVVLNNMRSATGNL 255
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+S + V D+ + + + L+ S
Sbjct: 256 SKASKDLPGVMQNVSGITKDIPPLVLQARATARDLQKLIEQVRSL 300
>gi|120404931|ref|YP_954760.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957749|gb|ABM14754.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 479
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/302 (10%), Positives = 84/302 (27%), Gaps = 15/302 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRS--NQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + LF V L + + V +++P GL + +V +
Sbjct: 5 RRMKIQLALFAVIALMAMGVMGVHFMKLPAKLFGVGRYTVTVQLPQ-AGGLYSGGNVTYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L P A ++ + A + +Q G Y+ L +
Sbjct: 64 GTEVGRVEAVRL---TPGGVDAVLSLKSGIDVPSDLRAEVHSQSAIGEQYVALLPRSGDA 120
Query: 122 KTIFQIATERNQRAMITATPS---------GINYFISNAENTSKKISDSSRHIQKIIENI 172
+ + + + N + ++ + + + I
Sbjct: 121 RPLRDGDVITPADTSVPPNVNTLLADANVGLQAIPRDNLQTVVEESYAAVGGLGPELSRI 180
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
T L I ++ + T + +
Sbjct: 181 VDSSTKLAIEARRHLDPLITLIDQSQPVLDSQTRTSEAIQAWAAQVATVTTQLQTQDQTL 240
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
A + + + ++ + + V+ + V + T+ + +++ L S
Sbjct: 241 ARVIDDGGESADAVRQLVDRVKPTLPIVLANLVSVGQVAVTYHDNIEQLLVLFPAVVSAE 300
Query: 293 KS 294
++
Sbjct: 301 QA 302
>gi|302525038|ref|ZP_07277380.1| secreted protein [Streptomyces sp. AA4]
gi|302433933|gb|EFL05749.1| secreted protein [Streptomyces sp. AA4]
Length = 351
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 41/126 (32%), Gaps = 5/126 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F++ + + ++ + L+ VR +G+ VG+I G
Sbjct: 31 IFILVTVLATVVLALSITGGSVGGSQRYGATFV---DATALNVGDDVRISGVKVGQIEG- 86
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
LD N + + + + TA I+ + + G Y+ L R +
Sbjct: 87 -LDVVDQNRAHVSFSLENGRTVPANVTAVIKYRNMVGQRYLALERPRSAAGVLPPGGEIP 145
Query: 132 NQRAMI 137
R
Sbjct: 146 LDRTTP 151
>gi|311277834|ref|YP_003940065.1| Mammalian cell entry related domain-containing protein
[Enterobacter cloacae SCF1]
gi|308747029|gb|ADO46781.1| Mammalian cell entry related domain protein [Enterobacter cloacae
SCF1]
Length = 183
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VG+F++ L + F + + ++ GL S VR
Sbjct: 1 MQTKKSEIWVGVFLLVALLAALFICLKAADLTSLRTEPTYRVYATFDNIGGLKVRSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD + I + +++ +IRT GL G ++ L+
Sbjct: 61 GGVVIGRVEEIALDPKTY-LPRVTLDIEDRYNQIPDTSSLSIRTSGLLGEQFLALNVGFD 119
Query: 120 EKKT 123
+ +
Sbjct: 120 DPEM 123
>gi|111023089|ref|YP_706061.1| hypothetical protein RHA1_ro06126 [Rhodococcus jostii RHA1]
gi|110822619|gb|ABG97903.1| possible secreted protein [Rhodococcus jostii RHA1]
Length = 395
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 54/129 (41%), Gaps = 3/129 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +++ + LF+V + F + +++ + + P + R+ GL+ +SV +
Sbjct: 1 MMTRHVVAQLVLFLVISIAAMLFGLRYVAGPDTFGSP-IHLSARL-DHAAGLAQGASVNY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG I + ++ E L + P T + +TA I T+ GI +++
Sbjct: 59 RGVGVGTISSVDVNPEGTGVVL-GIELHPGTQVPAGSTAKITTENAIGIQALDIMPDSAN 117
Query: 121 KKTIFQIAT 129
+
Sbjct: 118 PPYLADGDV 126
>gi|224371973|ref|YP_002606139.1| ABC-type transporter, periplasmic substrate-binding protein
[Desulfobacterium autotrophicum HRM2]
gi|223694692|gb|ACN17975.1| ABC-type transporter, periplasmic substrate-binding protein
[Desulfobacterium autotrophicum HRM2]
Length = 339
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/339 (12%), Positives = 100/339 (29%), Gaps = 22/339 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +GLFV+ + L + + V SV GL S V++
Sbjct: 1 MSEQANNFKLGLFVIISF-ALLVTALALLGAGDFFKQETLVETCFNESVQGLDVGSPVKY 59
Query: 61 NGIPVGRIVGL----FLDQEYPNHSLAKALIRPDTPLY---------------PSTTATI 101
G+ +G++ + + ++ L + D L T +
Sbjct: 60 RGMDIGKVKEITGASRVYGVRSDYVLVIISLFEDVSLGQPGGSVKDKIEHAVAEGLTVQM 119
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
GL G Y+E + + + ++ I E + + P+ I + + KK+ D
Sbjct: 120 AFMGLTGAAYLETNYMGETERIPLTIPWEPKHPYIP-SKPNKITQMGESLDRIMKKLEDI 178
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ L+ + I + + + ++ T DS T +
Sbjct: 179 NIQGVLAELQSVIALSAAKLDNANIKEISTQTATLLREIRTTNARLAELFDSTQTKGLMN 238
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
D +++ ++ K I + + ++ + R I
Sbjct: 239 DARAAVNGAKDIVESSKAP-ISQALNEFRGAAATANSLAGSLDKTSRLLGDMVWVNTDSI 297
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
++ + ++ + + + +
Sbjct: 298 KDVVDNLKITSENLRQMSQDIKRYPARLLFEAPPEKEKT 336
Score = 43.4 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 15/126 (11%), Positives = 44/126 (34%), Gaps = 21/126 (16%)
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRD------------ 381
I+ I++ ++ +++ + + L DA+ A++ +D
Sbjct: 202 NIKEISTQTATLLREIRTTNARLAELFDSTQTKGLMNDARAAVNGAKDIVESSKAPISQA 261
Query: 382 ---------TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
T+ + + L + + I+++V L+ T + + +R
Sbjct: 262 LNEFRGAAATANSLAGSLDKTSRLLGDMVWVNTDSIKDVVDNLKITSENLRQMSQDIKRY 321
Query: 433 PQDIVW 438
P +++
Sbjct: 322 PARLLF 327
>gi|77920341|ref|YP_358156.1| paraquat-inducible ABC-type transporter, periplasmic component
[Pelobacter carbinolicus DSM 2380]
gi|77546424|gb|ABA89986.1| paraquat-inducible ABC-type transporter, periplasmic component
[Pelobacter carbinolicus DSM 2380]
Length = 326
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/327 (11%), Positives = 101/327 (30%), Gaps = 8/327 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + Y +GLFV+ + + +I L + V SV GL S+V+
Sbjct: 1 MSERANYVKIGLFVIGAIIIAVAAIIVLG-AGSLFQKQILVETYFDESVQGLDIGSAVKV 59
Query: 61 NGIPVGRIVGLFLD----QEYPNHSLAKALIRPDTPLYPSTTAT--IRTQGLAGITYIEL 114
G+ VG++ + L + L + + + + ++ Q G+
Sbjct: 60 RGVKVGKVEAITLVDSVYPTEKRYVLVRIALLSRSLGRTAEVIQRGLQEQTDQGLRLRMA 119
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ Q + I +I +A +T + +++ I K +++++
Sbjct: 120 FQGVTGLAFLEADYLPAEQAPCLEIDWQPIYPYIPSAPSTITRYTEAVDKILKNLDSLDI 179
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHT-TQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + A + + ++ + + T+ + + A
Sbjct: 180 AALSGGIEQAITTLNRAMEEARVAQISDQSLALLNELRVTNQRLETLLVDGRAPLQQFFA 239
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + + + D + +R+ + Q I+ L +F +
Sbjct: 240 TLPDLSRSLTRSARQLETLTARLPDDLAPLGQSLRQVSALLTSEQQTIETTLENFRQTSE 299
Query: 294 SKETSAFLENIADSTSNMRSSISAIRE 320
+ + S + + +
Sbjct: 300 NLLDMSENARSYPSQMLFGAPPTPVEP 326
>gi|120435992|ref|YP_861678.1| secreted MCE family protein [Gramella forsetii KT0803]
gi|117578142|emb|CAL66611.1| secreted MCE family protein [Gramella forsetii KT0803]
Length = 319
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 88/291 (30%), Gaps = 10/291 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ L ++ + F +L N D + V+GLS S V NG+
Sbjct: 6 SREVKTALLAITAIVILIFGYSFLKGENLLDNSRTFYAVY--DDVEGLSPSSEVTINGLK 63
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG+I G+ L ++ D ++ A I + G + + + I
Sbjct: 64 VGQITGIDFL-NETGDLLVSFTVKNDFRFSKNSEAKIYGGSIIGGKSLAIVPQYDSEMGI 122
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + I + + I E ++ I
Sbjct: 123 AKSGDTLKGDKEEGIMELVNDRLTPLQKKLEGTIVSADSMLTAITEILDDSTRNNIKGTF 182
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + +S TF + ++ T+ +K + +N+I
Sbjct: 183 RNLDATVASFKVTADELQGIV-KGNSEKLNRTFTNLDEMSTNFNKFSDTLTNMNINKITG 241
Query: 245 NIQVSSNNFVKSSDQVINTVH------DVRETTQTFQEVGQKIDHLLSDFS 289
+++ +F S+++ + + ++++ LL D
Sbjct: 242 DLEKVIADFEGISNKLNSKEGTAGKLINDDAVYNNLDRATKQLEQLLQDIK 292
>gi|304382864|ref|ZP_07365347.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304336049|gb|EFM02296.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 300
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/268 (12%), Positives = 83/268 (30%), Gaps = 5/268 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + L + F+ + +L + + I ++ GLST S +
Sbjct: 1 MQFFTKEVKIALVAIVGGVILFYGLNFLKGITVFSSDNSYTIA--FHNISGLSTSSPIYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + + D + L I + + ++A I + L I L
Sbjct: 59 DGYRVGVVKSIDYDYRNHDTILVHVDINKEFRIPKGSSAEIVSDLLGNIQVNLLLANNP- 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ I + I + K+ I ++ + +
Sbjct: 118 RERIEPGEVIVGNLNDGAVGQ--MKDMIPTIQKMLPKLDSIMASINVLLADPAIAQSLHN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T ++ ++ +V + + + L +L ++ + K++
Sbjct: 176 VRTITSDLTVSTKQLNVLMTTLNHRVPGMLGKANDILSNTQQLTNNLAQIDVTSTMAKID 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVR 268
L+ +Q+ + + ++D
Sbjct: 236 ATLDGVQLFTQKLNNEQGTLGLLLNDPS 263
>gi|317403201|gb|EFV83723.1| mce like protein [Achromobacter xylosoxidans C54]
Length = 166
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 37/97 (38%), Gaps = 2/97 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S P + +V GL + V+ G+ VGR+ G+ D + ++ +
Sbjct: 32 STFSFAPTYTLTANF-DNVGGLKVRAPVKSAGVVVGRVAGISFD-DKTFQAVVSMNLETA 89
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
++A I T GL G Y+ L+ +E
Sbjct: 90 YQFPKDSSAAILTSGLLGEQYLGLTPGSEEDNFADGG 126
>gi|262203807|ref|YP_003275015.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262087154|gb|ACY23122.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 405
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 22/288 (7%), Positives = 88/288 (30%), Gaps = 6/288 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+G+ + + + + + Y P++ GL V +G+ VG
Sbjct: 32 RVQIGVIGLVVTALVVITAMQMDKL-PYLSPISTYSAYF-DDAGGLVKGDIVSVSGVNVG 89
Query: 67 RIVGLFL-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
+ + L D + + + + A I+T+ + G + + +
Sbjct: 90 TVEKIALADTDQGTKVRVDFRMADTVEIGDQSQAAIKTETVLGRRNLTVIPHPGGRIKPG 149
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + +E + +++++ + + ++ + + +
Sbjct: 150 GSIPVSQTISPYSLQDALEGATSTLSETDTDQLNEALQTLTVTFQSTPTQVQGAVNGVAR 209
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S +A+ + + ++ +N L + + Q++
Sbjct: 210 LSKTVADRDNALRALLSKANQVSRVVGDRNQQINQLLLDANTLVGEVQARRFALQQLISG 269
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
++ + + + ++ + + + + D + +
Sbjct: 270 LRDVTTQL---NGFIAENNEQLKPSLEKLNRLMTILSDKERDLKATID 314
>gi|33598745|ref|NP_886388.1| mce related protein [Bordetella parapertussis 12822]
gi|33574875|emb|CAE39538.1| mce related protein [Bordetella parapertussis]
Length = 168
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S P ++ ++ GL + V+ G+ VGR+ + D + ++ +
Sbjct: 32 STFSFAPTYQLTANF-DNIGGLKVRAPVKSAGVVVGRVSRIAFD-DKTFQAVVTFDLETA 89
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTL 117
++A I T GL G Y+ L+
Sbjct: 90 YRFPTDSSAAILTSGLLGEQYVGLAPG 116
>gi|307131032|ref|YP_003883048.1| Paraquat-inducible protein B [Dickeya dadantii 3937]
gi|306528561|gb|ADM98491.1| Paraquat-inducible protein B [Dickeya dadantii 3937]
Length = 556
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 51/400 (12%), Positives = 108/400 (27%), Gaps = 23/400 (5%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S V + + VGR+ L ++ + D P R +
Sbjct: 167 DDLGSLDIGSPVYYRRVQVGRLAPYHLKEDGRG---VSLQVFIDAPYDRLVQPDTRFWNV 223
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+G+ + + K + + + S +++
Sbjct: 224 SGVDLSVGANGFRLKTQTVAAVLAGGIAFATPESNKDSDKTPAINSPVSYRLAPDQESAM 283
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ P + A + T +T + + F TI D+
Sbjct: 284 SAPDGQAIPFRLRFERALHGLDIGAPVEFSSVTIGRVTAITLDYNPTGYRFPTIVDVEVY 343
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
++ +D + E+ + H +R + ++
Sbjct: 344 PARLGNLLDKLPGSSPSESPSPVETVNKAALFTRDLVAHGLRAQAVPGNLLTGQLYVSFD 403
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
F N S + +E+I +NLN++
Sbjct: 404 FVPDAPN----VRFNPNARPIELPTVSGGLDKLQAQLGGIVAKVNNMPLESIGNNLNNTL 459
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + + +N N A M + T+E I L +F+Q
Sbjct: 460 VELNKTLRLVN--------NQTLPTANSLMKQTQLTTENAQELIAEDSPLLIHFTQ---- 507
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+++ T+ + ERNP+ ++ GR S
Sbjct: 508 ----TLQEASRTLRTLREFTEQLERNPESLLRGRSSDSAP 543
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 33/284 (11%), Positives = 79/284 (27%), Gaps = 13/284 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKA 85
S + DG +R ++ GL + V F+ + +GR+ + LD + ++
Sbjct: 281 SAMSAPDGQAIPFRLRFERALHGLDIGAPVEFSSVTIGRVTAITLDYNPTGYRFPTIVDV 340
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ P A + L + S +T+ + A +
Sbjct: 341 EVYP---------ARLGNL-LDKLPGSSPSESPSPVETVNKAALFTRDLVAHGLRAQAVP 390
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + N T++ I M
Sbjct: 391 GNLLTGQLYVSFDFVPDAPNVRFNPNARPIELPTVSGGLDKLQAQLGGIVAKVNNMPLES 450
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + +++ N L+ + +++ EN Q T+
Sbjct: 451 IGNNLNNTLVELNKTLRLVNNQTLPTANSLMKQTQLTTENAQELIAEDSPLLIHFTQTLQ 510
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ T +T +E ++++ S ++ + S
Sbjct: 511 EASRTLRTLREFTEQLERNPESLLRGRSSDSAPNAADDRSASPK 554
Score = 44.5 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 9/82 (10%)
Query: 13 FV-VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
FV V L S + +S GP + R S GL ++V++ + VG +
Sbjct: 23 FVPVIALAISLAMLV---QSRLSAGPDITLSFR---SATGLEAGKTTVKYKDVTVGIVKD 76
Query: 71 LFLDQEYPNHSLAKALIRPDTP 92
+ ++ + + L + + +
Sbjct: 77 IVIN-DDGSRVLVRVQLNKNAE 97
>gi|134098923|ref|YP_001104584.1| Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|291009383|ref|ZP_06567356.1| Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|133911546|emb|CAM01659.1| possible Mce family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 339
Score = 75.7 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/145 (12%), Positives = 40/145 (27%), Gaps = 6/145 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F+ L + ++ G R L+ VR G+ +G + +
Sbjct: 13 IFLFVTLVATATLGVTIANVGM--GDKVAYTARFTD-ATSLNPGDDVRMAGVRIGEVEAV 69
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-KEKKTIFQIATE 130
+ + + + TA IR + + G Y+ L + + A
Sbjct: 70 EVA--DRRFAEVTFAVDAHRAVSRHATAAIRYRNMVGQRYLSLDQGPLPMDRVLAPGAHI 127
Query: 131 RNQRAMITATPSGINYFISNAENTS 155
+R + +
Sbjct: 128 PLERTRPAVDLTAMFNGFKPLFQAL 152
>gi|293609505|ref|ZP_06691807.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827957|gb|EFF86320.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 566
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/403 (9%), Positives = 107/403 (26%), Gaps = 39/403 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + T+ Q
Sbjct: 200 DDLGSLDVGSPIYYRRINVGQITAYKLSNDGK---------------------TVELQTF 238
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S ++
Sbjct: 239 IRAPYDKFVTTDARFWQASGIDVSLNASGFSLDTQSLASIVAGGIAFGIPESSRATTAAN 298
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
N+ + + + + + H + + +I +
Sbjct: 299 HSRFNLWDSKSEALKDPDGQPRGVIMYFDHSLRGLSVGAPIDFMGIEIGNVKSINAEFYN 358
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 359 NYKQIRMRVEAVIYPSRVENGQALNPNSNIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 418
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + +N+N
Sbjct: 419 PKAKPATLQILSDDRVVIPTTPTELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLNNMNT 478
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ A + D ++ + +
Sbjct: 479 AIESTDKLVKQLDGKVA-PGLQATLDDVRKTVRSSESILSS---------------DAPL 522
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
D++ ++++ + E++P+ I+ G+ +
Sbjct: 523 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGKTPETDDE 565
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
DG VI+ S+ GLS + + F GI +G + + + +
Sbjct: 316 DGQPRGVIMYFDHSLRGLSVGAPIDFMGIEIGNVKSINAEFYNNYKQIRMRVE 368
>gi|330888612|gb|EGH21273.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv. mori str.
301020]
Length = 155
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ T VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD + I+ L +TA+I T GL G YI LS
Sbjct: 61 AGVTIGKVTAIDLDHDTFTG-RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGD 119
Query: 120 EKKTIFQIATERNQ 133
+K Q
Sbjct: 120 DKLLKDGGTIHDTQ 133
>gi|257054986|ref|YP_003132818.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584858|gb|ACU95991.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 329
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 94/283 (33%), Gaps = 10/283 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G ++L + G GL+ + VR GI V
Sbjct: 11 NPLVLGAVGTALLAGVLVATVNYENLPLIGGGTT-YQAEFAE-AAGLAPTNEVRVAGIKV 68
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + L ++ L + D + T+A I+ + L G Y+ L +
Sbjct: 69 GEVTDVELAED---RVLVSFRV-SDAWIGNRTSAEIKIKTLLGQKYLALHPMGDAVLDPD 124
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
T + + +++++ S R + + + E+ + + + + +
Sbjct: 125 DPIPLGRTTTPYDVTTAFEQLATTAGSIDTEQLARSFRTLGQTFDGAEEHVRSALNGLTS 184
Query: 186 ISTVLANNISHIDKMMHTTQVT----PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+S +A+ + ++ SSD + +L+ + + +
Sbjct: 185 LSRTIASRDEELADLLANAHTIADTLADSSDEFDRLIEDGNLLLTELDHRREAIHDLLAG 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + S +++Q+ T+ ++ T Q+ ++D
Sbjct: 245 AQDLAEQISGLVADNTEQLAPTLAELDAVTDILQQHRDELDRT 287
>gi|257054447|ref|YP_003132279.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584319|gb|ACU95452.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 394
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/369 (10%), Positives = 108/369 (29%), Gaps = 9/369 (2%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL + +L + W D V ++ GL +SVR G+ VG +
Sbjct: 13 GLAMACVLGLVIATGLW---WTLKDTNRKHVTAYFTQAI-GLYAGNSVRILGVEVGEVTS 68
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ + + + + A I L Y++L+ + A
Sbjct: 69 VRPEGD---RVRVEMTYDRRFTVPADAKALIVAPALVSDRYVQLAPAYTGGDQLDDGAVI 125
Query: 131 RNQRAMITATPSGINYFISNAENTS-KKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
R + ++ +S +++ + +++ + L + T
Sbjct: 126 PLSRTSVPLEIDELSESLSRVSEALGPDGANADGALSDLLDTAAENLDGNGRALHEAITR 185
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
L + + T + + +D + A + + N+ +
Sbjct: 186 LGDAAGTLSGSSDDLFGTVENLAKLSNTLAASDDDMREFEERLADVSDFLERERHNLAAT 245
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ V + ++D RE ++ + +I +L D + ++ + + +
Sbjct: 246 VTELGTTLQLVDDFINDNRERVKSNVDKLAEITQVLVDQRAA-LAETLDIAPLALGNLVN 304
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLF 369
++ + + + + + N+ + +L + +
Sbjct: 305 TYNAASGTLDTRPNMNELTEPPLLMVCNLLKQTPRALDALGKLCADAAGVLDGVVQLPSL 364
Query: 370 KDAQRAMHT 378
A++
Sbjct: 365 AQTVNALNK 373
>gi|77457092|ref|YP_346597.1| hypothetical protein Pfl01_0865 [Pseudomonas fluorescens Pf0-1]
gi|77381095|gb|ABA72608.1| putative ABC transport system, substrate-binding protein
[Pseudomonas fluorescens Pf0-1]
Length = 155
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSPTSTTDTYKLYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S +
Sbjct: 61 AGVTIGKVTAIDLDRDSFTG-RVTLQVDKSVDNLPTDSTASILTAGLLGEKYIGISVGGE 119
Query: 120 EKKTIFQIATERNQ 133
+ + Q
Sbjct: 120 DTRLKDGGTIHDTQ 133
>gi|326333396|ref|ZP_08199642.1| putative secreted protein [Nocardioidaceae bacterium Broad-1]
gi|325948792|gb|EGD40886.1| putative secreted protein [Nocardioidaceae bacterium Broad-1]
Length = 422
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 46/133 (34%), Gaps = 5/133 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ + +F++ L F +R V++ G+ D+ V +
Sbjct: 1 MITRRTKMQLMIFLLITLVGVSFVGARYARLGSLFVKDHYVVMAHFEQSGGIYEDAEVDY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ +G++ L L++ I + + A + + G Y+EL
Sbjct: 61 RGVKIGQVGELVLNRSG---VDVTLKIDNAWKDKIPADSLAVVGNRSAVGEQYVELQPQS 117
Query: 119 KEKKTIFQIATER 131
K + + +
Sbjct: 118 KGAPYLEEGSEIA 130
>gi|258646568|ref|ZP_05734037.1| putative ABC transport system substrate-binding protein [Dialister
invisus DSM 15470]
gi|260403981|gb|EEW97528.1| putative ABC transport system substrate-binding protein [Dialister
invisus DSM 15470]
Length = 158
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
G+ IL + ++ + +DG + SV G+ + VR+ G+ VG
Sbjct: 4 EVKTGMMAFIILVVAMAVFLFVRPKDWFDGNYFRMTASFS-SVQGIKKGNEVRYAGVRVG 62
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ + + + + I+ D + T+ G+ G Y+++
Sbjct: 63 EVSKISTEGNEG---ILEMRIKKDAQIPLDAEFTVSQSGVIGDYYVDIRGGH 111
>gi|300784338|ref|YP_003764629.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793852|gb|ADJ44227.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 397
Score = 75.7 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/377 (11%), Positives = 104/377 (27%), Gaps = 16/377 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ T + V L + ++ +V GL SSVR G+
Sbjct: 9 RSLVTWLAFACVLALIVTAGLYLVFR-----SSNGTKLSAYFGKTV-GLYAGSSVRVLGV 62
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG + + + + D PL A + L Y++L+
Sbjct: 63 PVGEVTDVTPQGD---AVRVDMRVD-DVPLPAGVGAVVVAPSLVSDRYVQLTPAYDSGPV 118
Query: 124 IFQIATE-RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ +++ A + + ++ + +++ L A+
Sbjct: 119 LASGTVLAKDRTATPVELDDLYSSLDKLSTALGPNGANKDGALSGVLDTAANTLKGNGAS 178
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ + LA+ +D T + +S +D + A + +
Sbjct: 179 LNSTVGQLADLAKTLDGSKDDLFSTVQNLNSFTGALAQSDRQLNEFYGRVADVSRFLAAD 238
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ + + + V V+D + ++ + + +L D + + A
Sbjct: 239 SSEVGAALQSLGGALGDVQQFVNDNKTALESNVDKLASLSKVLVDQRAALAEVLDIAPTG 298
Query: 303 NIADSTSNMRSSIS----AIREITDQRQKIISTINTIENITSNLNDSSQKF-AELMSKIN 357
S +S + + + D+ +L ++
Sbjct: 299 ATNFINSYDAASGTIAVRDNLNELTNPPILTVCRLISAVTPKEVPDALGNICKQLAPILD 358
Query: 358 NISALKENNSLFKDAQR 374
L + Q
Sbjct: 359 GALKLPTIPQVLNSLQN 375
>gi|284043088|ref|YP_003393428.1| hypothetical protein Cwoe_1625 [Conexibacter woesei DSM 14684]
gi|283947309|gb|ADB50053.1| Mammalian cell entry related domain protein [Conexibacter woesei
DSM 14684]
Length = 559
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/406 (10%), Positives = 106/406 (26%), Gaps = 44/406 (10%)
Query: 4 KNYY--TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ ++ VGL + +L + + + V S + L S VR
Sbjct: 17 RKHWSRFRVGLIAIVVLIIPVYLAF---TKDIPFTSGYRVTAVF-ESANNLRAGSPVRIA 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + + N S + I D P++ T IR + +
Sbjct: 73 GVNVGRVKSVA-RYKDTNLSQVEMEISEDGLPIHEDATLKIRPRIFLEGNF--------- 122
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + SR +
Sbjct: 123 FVDLRPGTPGSPDVPDGGTIGVTQTSTPVQLDQLLTALQSDSR--------EDLQHVLEE 174
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
S + + + + +++ T ++ I+ +
Sbjct: 175 YGAALNSKPTPEQDAELPESVRGLTGAQGLNNAAAPGARALRNATIVNDAIRGEKPGDLA 234
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + ++ S Q+ + + + T F + + + + ++
Sbjct: 235 KTIASVARLSRTLESREGQLQDLIVNFNLTASAFANQSGALSETIRLLGPTLATARSALR 294
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ A ++ + + + + +N S + +
Sbjct: 295 SVDAALPSTRAWAR---------------EILPGVRETAATVNASFPWI----EQTRALL 335
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
E L + A + R +P I + Q F++ L
Sbjct: 336 GPDELQGLMAELTPATKDLARLTNASIRLLPEIDDFSQCFAKVILP 381
>gi|239931481|ref|ZP_04688434.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291439857|ref|ZP_06579247.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291342752|gb|EFE69708.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 352
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 37/106 (34%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
FVV + ++ + + V GL SVR +G+ VG + +
Sbjct: 23 AFVVVTALATTVLGLSVADTG-VGTGTSTYRALFTD-VTGLVDGDSVRISGVEVGEVTDV 80
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + +R D L S TA ++ + G YI L
Sbjct: 81 RVV--QRRTAQVTFTVREDRRLPRSATAAVKYLNMVGQRYIALDRG 124
>gi|257485188|ref|ZP_05639229.1| PqiB family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|331010907|gb|EGH90963.1| PqiB family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 559
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/404 (7%), Positives = 87/404 (21%), Gaps = 35/404 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S + + I VG++VG L ++ D + T +
Sbjct: 172 TDDLGSLDIGSPIYYRRIQVGQVVGYELSKDGRGVDIQIFINAPNDQYITTDTRFWNASG 231
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I + +
Sbjct: 232 VDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKLADENAEFKI------------- 278
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ ++ + V + +
Sbjct: 279 -----------FDDQATALAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVD 327
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D K I ++ + ++ + F G +
Sbjct: 328 LDYDPATKTFPGIVGAVIYPKRLGAAESKLQELGGKGDEEEQSARVLGAFVANGLRAQVR 387
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-N 343
+ + + + + + + +E ++ +
Sbjct: 388 NGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSKLPID 447
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
D ++ +S++ +S+ + + T N
Sbjct: 448 DLAKNLNGSLSELQKTLKQVN-SSVLPQMRGTLQQAEKTMGTANDSFAE--------DSP 498
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 499 ARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 542
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
>gi|171058396|ref|YP_001790745.1| hypothetical protein Lcho_1713 [Leptothrix cholodnii SP-6]
gi|170775841|gb|ACB33980.1| Mammalian cell entry related domain protein [Leptothrix cholodnii
SP-6]
Length = 356
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 34/94 (36%), Gaps = 4/94 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + +GLF + L ++ + + ++ GS+ GL + V F
Sbjct: 1 MTPRPHALRIGLFAIGGLALLVMAVASVFG-GRLFADSERAVLHFNGSIYGLQIGAPVVF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALIRPDT 91
G+ +G +V + L + + +
Sbjct: 60 RGVRMGGVVSIGLVNDAQGAGFQIPVVVELDSEL 93
>gi|145222153|ref|YP_001132831.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145214639|gb|ABP44043.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 565
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F + + ++++L V G+ +++V
Sbjct: 1 MLDRLTRIQLSIFAIVTVLSVGAVALFYLHVPAAVGIGAYNVTANFVA-GGGIYQNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G + + L +A+ + DTP+ + TAT+++ G YI+L
Sbjct: 60 YRGVTIGHVESVGLSDNS---VVARMQLNSDTPVPENVTATVKSVSAIGEQYIDLVPPED 116
Query: 120 EKKTIFQIATERN 132
+ + + ++
Sbjct: 117 ASQQMLRDGSDIG 129
>gi|118471359|ref|YP_889042.1| mce-family protein mce1f [Mycobacterium smegmatis str. MC2 155]
gi|118172646|gb|ABK73542.1| mce-family protein mce1f [Mycobacterium smegmatis str. MC2 155]
Length = 576
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 50/132 (37%), Gaps = 5/132 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ T + +F ++ + ++ ++ V +++P + GL S+V
Sbjct: 1 MLTRFIRTQLIIFTIASIVGVAVMLFAYMQVPTLLGLGRITVTLQLPAT-GGLYQFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G +G++ + L + + A + + A +R+ G Y+EL +
Sbjct: 60 YRGSQIGKVTAVELTETG---AEATLSLDRSPKVPADLQAQVRSMSAVGEQYVELLPRKD 116
Query: 120 EKKTIFQIATER 131
+ +
Sbjct: 117 SGPYLENGSVIP 128
>gi|4336800|gb|AAD17959.1| toluene tolerance protein Ttg2C [Pseudomonas putida]
Length = 161
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 53/134 (39%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSASPSSDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S +
Sbjct: 61 AGVTIGKVTAIDLDRDSYTG-RVTLQLDKSVDNLPTDSTASILTAGLLGEKYIGISVGGE 119
Query: 120 EKKTIFQIATERNQ 133
++ Q
Sbjct: 120 DQVLKDGGTIHDTQ 133
>gi|126437562|ref|YP_001073253.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126237362|gb|ABO00763.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 352
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 35/106 (33%), Gaps = 5/106 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G+F + ++ + + + G++ + V +GI
Sbjct: 7 TNPLRTGIFGIVLVTCLVLVSFGYTGL-PFFPQGKSYEAYFTD-AGGITPGNDVNVSGIT 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VG++ G+ L + + + + + + I+T + G
Sbjct: 65 VGKVDGVELAGD---AAKVNFTVDREVRVGDQSMVAIKTDTVLGEK 107
>gi|226943415|ref|YP_002798488.1| organic solvent tolerance ABC efflux transporter, substrate binding
protein [Azotobacter vinelandii DJ]
gi|226718342|gb|ACO77513.1| organic solvent tolerance ABC efflux transporter, substrate binding
protein [Azotobacter vinelandii DJ]
Length = 156
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ T VGLF+++ + +S + ++ GL+ + V
Sbjct: 1 MQTRTLETGVGLFILAGMLALLLLALRVSGLTVSTNGDTYRLYAYFDNIAGLTNRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD+ + L +TA+I T GL G Y+ +S
Sbjct: 61 AGVAIGKVTAIDLDRNSYTG-RVTMELEKRVDNLPTDSTASILTAGLLGEKYVGISVG 117
>gi|239982862|ref|ZP_04705386.1| secreted protein [Streptomyces albus J1074]
gi|291454705|ref|ZP_06594095.1| secreted protein [Streptomyces albus J1074]
gi|291357654|gb|EFE84556.1| secreted protein [Streptomyces albus J1074]
Length = 351
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
F+V + + + ++ + V GL SVR +G+ VG + +
Sbjct: 22 AFLVVTVLATTVLGFSIANTG-VRTGTTTYKALFTD-VTGLLDGDSVRISGVKVGEVTDV 79
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + ++ + L S TA ++ + G Y+ L
Sbjct: 80 RVV--DRRLAQVTFTVQKERTLPRSATAAVKYLNMVGQRYVSLDRG 123
>gi|33594618|ref|NP_882262.1| mce related protein [Bordetella pertussis Tohama I]
gi|33603819|ref|NP_891379.1| mce related protein [Bordetella bronchiseptica RB50]
gi|33564694|emb|CAE44016.1| mce related protein [Bordetella pertussis Tohama I]
gi|33577944|emb|CAE35209.1| mce related protein [Bordetella bronchiseptica RB50]
Length = 168
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 35/87 (40%), Gaps = 2/87 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S P ++ ++ GL + V+ G+ VGR+ + D + ++ +
Sbjct: 32 STFSFAPTYQLTANF-DNIGGLKVRAPVKSAGVVVGRVSRIAFD-DKTFQAVVTFDLETA 89
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTL 117
++A I T GL G Y+ L+
Sbjct: 90 YRFPTDSSAAILTSGLLGEQYVGLAPG 116
>gi|57168792|ref|ZP_00367923.1| conserved hypothetical protein [Campylobacter coli RM2228]
gi|57019839|gb|EAL56522.1| conserved hypothetical protein [Campylobacter coli RM2228]
Length = 274
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 43/101 (42%), Gaps = 1/101 (0%)
Query: 25 IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
+ WL ++ + I SV GL + VR G+ +G + + + +
Sbjct: 1 MLWLGGYSK-EESFEYYEIHTQESVAGLGIKAPVRLLGVEIGNVENISIYDKENLGVNIL 59
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
I+ TP+ T AT++ QG+ G+ +++L K +
Sbjct: 60 IKIKKGTPIKEDTFATLQFQGITGLKFVQLQGGSKNSPKLQ 100
>gi|303247226|ref|ZP_07333500.1| Mammalian cell entry related domain protein [Desulfovibrio
fructosovorans JJ]
gi|302491385|gb|EFL51273.1| Mammalian cell entry related domain protein [Desulfovibrio
fructosovorans JJ]
Length = 337
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 5/114 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K +GLFV S + I+ P SV GL + V F
Sbjct: 1 MSAKANKPLIGLFV-LGALALALGAIVALGSGMFFTQKYRCIMFFPNSVSGLEVGAPVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALI-RPDTPLYPSTTATIRTQGLAGIT 110
G+P+G + + ++ + I + Q LA
Sbjct: 60 RGVPIGSVTEISIEADPSKLHFFIPVVVEIMGGKIKIIHDKGIQKGLQNLAQAR 113
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 43/109 (39%), Gaps = 3/109 (2%)
Query: 337 NITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
I S + +QK + + ++++ + + L A A+ + T + I +
Sbjct: 228 EIRSKVGPLAQKLDQALQNYSDLAKNLDRRSEGLSTSASGAIKSLDATLKDGRAAIGNFQ 287
Query: 395 NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ + S + D+ + ++ + N ER+P+ ++ G+
Sbjct: 288 KVINSNS-PTVTDLNRSLSEIAGAARAIRELANFLERHPEALIQGKGGP 335
>gi|325270016|ref|ZP_08136624.1| hypothetical protein HMPREF9141_1834 [Prevotella multiformis DSM
16608]
gi|324987601|gb|EGC19576.1| hypothetical protein HMPREF9141_1834 [Prevotella multiformis DSM
16608]
Length = 326
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/319 (10%), Positives = 89/319 (27%), Gaps = 10/319 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+ L + + FF + +L + + ++ + GLS + V +G VG
Sbjct: 9 VKIALVAILAVVVLFFGMQFLKGLSVFSTDTHYRMM--FSDITGLSNSTPVYASGFKVGT 66
Query: 68 IVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D P I + T A I + + + + + + +
Sbjct: 67 VKSIEYDYARPGEPIDVGVDIDKSMKIPEGTKAEIISDLMGNVKVVLVFGKSSRM--LKE 124
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ T + + + + K+ + + + P + +
Sbjct: 125 NGVIDGRI--NDGTLGDMKSMVPSIQKMLPKLDSILASMNIL---LADPAIKSSIHNVNR 179
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T + + + + + + I + N
Sbjct: 180 ITANLTTSTQELNRLLAQADRSLPVLTAKAGRVMDNANGMMTNANSGITEARGAIRRANG 239
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+++ N S V T+ V T + + K++ M L +
Sbjct: 240 MMTTLNDKVSGIDVQGTMTKVNATLEHMNTLTAKLNSNEGTMGLLMNDPTLYNNLNSTMR 299
Query: 307 STSNMRSSISAIREITDQR 325
S ++ +++ A +
Sbjct: 300 SADSLLTNLKAHPKRYVHF 318
>gi|239907928|ref|YP_002954669.1| hypothetical protein DMR_32920 [Desulfovibrio magneticus RS-1]
gi|239797794|dbj|BAH76783.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 336
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 4/90 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K T +GLFV + S + I+ P SV GL + V F
Sbjct: 1 MSGKANKTMIGLFV-LGALTLALAAIVALGSGVFFTKTFPCIMYFPNSVSGLEVGAPVLF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALI 87
G+P+G + + ++ + + I
Sbjct: 60 RGVPIGSVKEISIEADASRLHFYIPVVIEI 89
Score = 40.7 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 18/175 (10%), Positives = 54/175 (30%), Gaps = 4/175 (2%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
V + L + + + + + S + + S
Sbjct: 162 LPEIPTVPSTFEKLTETIKQLPLQELVNRLIGAVTGIEQLVNSP-ELTKMPAKIDAVLTS 220
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + S+ F + ++ + + A+ AM +F T ++
Sbjct: 221 GGELVTELRAQVGPLSKNFEDAAQSFTELAKHLDKRTEGISVSAKTAMDSFDATMKESRA 280
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
I + + S + D+ + ++ + + ER+P+ ++ G+
Sbjct: 281 AISRFQKIINSDS-PTVTDLNRALSEIAAAARAIRELADYLERHPEALIQGKGGP 334
>gi|153004840|ref|YP_001379165.1| hypothetical protein Anae109_1978 [Anaeromyxobacter sp. Fw109-5]
gi|152028413|gb|ABS26181.1| Mammalian cell entry related domain protein [Anaeromyxobacter sp.
Fw109-5]
Length = 568
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/377 (8%), Positives = 102/377 (27%), Gaps = 11/377 (2%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VG+ +I + + D V GL+ S V+
Sbjct: 1 MKPAVNRALAVGILAAVTGLAFLVAITFFRKGGFSDRDSYLVHAYF-RDATGLTWKSRVQ 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT-IRTQGLAGITYIELSTLR 118
GI +G + + L+ + ++ D L+ T I L +E
Sbjct: 60 IAGIQIGEVDDIRLEG---ARARLDIRVKNDVELHKDACLTKIYPSALLPDAVLEAVPGS 116
Query: 119 KEKKTIFQIATERNQR---AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + E + ++ A + D + ++ ++ +
Sbjct: 117 DASPKLKDLPEEEREIACARAAATAQELMDSMAKIASDVQTITGDLADTVKGDQGSLREI 176
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + V+A I +++ + + I ++ + ++ +
Sbjct: 177 VENLARITRQVDQVVAEEGQTISEIL--ANTREFTGALAEISARDKERIHNIARNVEDLT 234
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + + + +
Sbjct: 235 SRLNVVLASVQDILDPQGGGAPGTPGAKGVPGAPGAPGTPGAPGAPGTPGALAGTPEQRA 294
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ A + + + +S++++ + ++ + S + + +
Sbjct: 295 QAQAEARGVKQAVDRLNTSLASLDSMLEKVNEGKSPAGKLLVDERLGRKVGEAVEGISDY 354
Query: 356 INNISALKENNSLFKDA 372
++ + L+ L +
Sbjct: 355 VDRLVKLQIQLQLRSEW 371
>gi|70731896|ref|YP_261638.1| PqiB family protein [Pseudomonas fluorescens Pf-5]
gi|68346195|gb|AAY93801.1| PqiB family protein [Pseudomonas fluorescens Pf-5]
Length = 563
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/398 (9%), Positives = 85/398 (21%), Gaps = 38/398 (9%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR--PDTPLYPSTTATIRT 103
+ L S V + I VG++V L K + D + T +
Sbjct: 176 TDDLGSLDIGSPVYYRRIEVGQVVSYQLANSGKG-VDVKIFVNSPNDKYVTTDTRFWNAS 234
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR 163
+ L + +I +
Sbjct: 235 GVDVTLGANGLKVNTESVSSILAGGI--------------------AFVEPKYSPNAKPA 274
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
T + + + V + + D
Sbjct: 275 DENAEYTLFGDQDTALAPPDGAPYYIRMRFDQALRGLSVNAPVEFLGVNIGKVVSMDLDY 334
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + L D V + + F + G +
Sbjct: 335 DEQRKYFPTLVGAVIYPERLGKAHEKLVKQTGGEDDVRSA-----KLIGAFVKNGLRAQP 389
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
+ + + + + ++ I+
Sbjct: 390 RSGNLLTGQLYISLDFVTNAKPVAYDATARPLEIPTVPGSMDKLQEQLQAVVDKISKLP- 448
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQ-RAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ + +N A E K + RDT E+ + + S + S
Sbjct: 449 -----IDSIAANLNGSLA--EMQKTLKQVNGEVLPQMRDTLEQSKKTLASANESFSEDSP 501
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + ++Q T + R+P+ ++ GR
Sbjct: 502 Q-RQKLGQAMEEVQRTARSVRVLSDFLGRHPEALIRGR 538
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
DG + +R ++ GLS ++ V F G+ +G++V + LD +
Sbjct: 294 DGAPYYIRMRFDQALRGLSVNAPVEFLGVNIGKVVSMDLDYDEQRK 339
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/504 (6%), Positives = 124/504 (24%), Gaps = 70/504 (13%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ +V L + + + + + ++ GP + + +GL + + V++
Sbjct: 22 RTRRFNVSLVWLVPIVAALVGLSMVVHNSLSAGPEISIS---FQTAEGLEANKTQVKYKN 78
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTA-----------------TIRTQ 104
+ +G++ + L + +AK + P + T+ +
Sbjct: 79 VVIGKVTSIALS-DDRKKVVAKVELDQSAEPFTADDSLFWVVRPRIGANGISGVDTLLSG 137
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
G + + K + + T + + +
Sbjct: 138 AFIGADAGKSEKRKDSFKGLETPPPITYGQKGKRFTLHTDDLGSLDIGSPVYYRRIEVGQ 197
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKM------------------------ 200
+ + + + +
Sbjct: 198 VVSYQLANSGKGVDVKIFVNSPNDKYVTTDTRFWNASGVDVTLGANGLKVNTESVSSILA 257
Query: 201 ----------------MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
D +
Sbjct: 258 GGIAFVEPKYSPNAKPADENAEYTLFGDQDTALAPPDGAPYYIRMRFDQALRGLSVNAPV 317
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ V S D + T +++ + ++ + I
Sbjct: 318 EFLGVNIGKVVSMDLDYDEQRKYFPTLVGAVIYPERLGKAHEKLVKQTGGEDDVRSAKLI 377
Query: 305 -ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
A + +R+ + +T Q + + + + + + + ++ + +
Sbjct: 378 GAFVKNGLRAQPRSGNLLTGQLYISLDFVTNAKPVAYDATARPLEIPTVPGSMDKL--QE 435
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ ++ + + +N + + L+ + L +++ + + ++T+ +
Sbjct: 436 QLQAVVDKISKL--PIDSIAANLNGSLAEMQKTLKQVNGEVLPQMRDTLEQSKKTLASAN 493
Query: 424 DCLNNFERNPQDIVWGREKGSVKI 447
+ + E +PQ G+ V+
Sbjct: 494 ESFS--EDSPQRQKLGQAMEEVQR 515
>gi|325122783|gb|ADY82306.1| paraquat-inducible protein [Acinetobacter calcoaceticus PHEA-2]
Length = 555
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/403 (8%), Positives = 107/403 (26%), Gaps = 39/403 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 189 DDLGSLDVGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 227
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S ++
Sbjct: 228 IRAPYDKFVTTDARFWQASGIDVSLNASGFSLDTQSLASIVAGGIAFGIPESSRATTAAN 287
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
N+ + + + + + H + + +I +
Sbjct: 288 HSRFNLWDSKSEALKDPDGQPRGVIMYFDHSLRGLSVGAPIDFMGIEIGNVKSINAEFYN 347
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 348 NYKQIRMRVEAVIYPSRVENGQALNPNSNIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 407
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + +N+N
Sbjct: 408 PKAKPATLQILSDDRVVIPTTPTELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLNNMNT 467
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ A + D ++ + +
Sbjct: 468 AIESTDKLVKQLDGKVA-PGLQATLDDVRKTVRSSESILSS---------------DAPL 511
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
D++ ++++ + E++P+ I+ G+ +
Sbjct: 512 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGKTPETDDE 554
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
DG VI+ S+ GLS + + F GI +G + + + +
Sbjct: 305 DGQPRGVIMYFDHSLRGLSVGAPIDFMGIEIGNVKSINAEFYNNYKQIRMRVE 357
>gi|118619943|ref|YP_908275.1| MCE-family protein Mce6C [Mycobacterium ulcerans Agy99]
gi|118572053|gb|ABL06804.1| MCE-family protein Mce6C [Mycobacterium ulcerans Agy99]
Length = 348
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/290 (11%), Positives = 80/290 (27%), Gaps = 15/290 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T +G +S+ ++ + + + L D+ V G+PV
Sbjct: 19 NKTWLGFVGLSLAVVMIGALLLVKQGGI---GYRRYTAEFLQAAS-LQPDNVVSVAGVPV 74
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G ++ + L H A+ ++ + L T A I+ + G YI+L
Sbjct: 75 GNVISVRLAGN---HVEARLRVKDNIALGRDTRAAIKITTIFGSRYIDLHP--------T 123
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
Q + T + + A++T I + + + L
Sbjct: 124 GAGVPPGQTIDLAHTEVPYDLQAALADSTRTFEQVDGDRIASSLTVLGQALNGLPDVFPQ 183
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ S I + S+ + + +
Sbjct: 184 ALENVRALSSVISQRRDQLGTLLKSTQNVTDILRRQQSDLGSMIRQGQDLIGEFVAHSAA 243
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + V D R + + +++ L++ + ++
Sbjct: 244 FHAMMQALTQVVGSLRTIVVDDRAALEDVVQTMEQLSAKLAEQDALFRNL 293
>gi|169631671|ref|YP_001705320.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243638|emb|CAM64666.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 346
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/294 (14%), Positives = 85/294 (28%), Gaps = 16/294 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E ++ +G+ V ++ S+ Q + L V
Sbjct: 14 EDRS-KFWIGMIAVGVVAAIIASMLL---YRQIGFGYTRYQAEFAQAAQ-LKKGDYVSVA 68
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG + + LD L +R + L T A I+T L G YIEL
Sbjct: 69 GVDVGEVKSVVLDG---TKVLVDLRVRDEVKLGAETQAAIKTTTLLGSRYIELRP----- 120
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
T N+R ++ T + A+ + + + + I+ + K L
Sbjct: 121 ---RGAGTIPNKRIALSHTEVPYDLQALLADTAATYEQVDATKLAQSIDILAKQLEGLPE 177
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ L + + S+ + L +
Sbjct: 178 ALPEAMRNLKDLSGIVSTRRTQIGELLKSASTVTATLHRQQANLGHLVFQGRDLLGEFVS 237
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ Q + K D + V R + + + + + SD M++
Sbjct: 238 RKASFQRLMASITKVVDLLSKVVVKDRPAFEKLLQQLRDVTAMASDHDDYMRNL 291
>gi|289771849|ref|ZP_06531227.1| secreted protein [Streptomyces lividans TK24]
gi|289702048|gb|EFD69477.1| secreted protein [Streptomyces lividans TK24]
Length = 354
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 71/256 (27%), Gaps = 12/256 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G S GL VR G+ VG++ G+ LD + D +
Sbjct: 47 FGGGTTYSADFSESA-GLDEGDEVRIAGVKVGQVTGVALDG---AKVKVTFEVE-DAWIG 101
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
TTA I + + G Y+ L + + R + T S + + + +
Sbjct: 102 DRTTAAIAIKTVLGDKYLAL-------DPLGSGRQDPGARIPLARTTSPYDVTQAFQDLS 154
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + E I + ++ +T L++ I K S
Sbjct: 155 GTVDDIDTGRLAESFETISDTFKDSPPHVRKAATGLSDLSKSISKRDAKLSELLKGSARF 214
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
L ++ I ++ V D +
Sbjct: 215 TKTLENNKSSFETLIEDGGPLLGELRDRRTAISALLKGSQDLGTELGGLVEDNEKQLGPT 274
Query: 275 QEVGQKIDHLLSDFSS 290
+ ++ +L ++
Sbjct: 275 LKALGRVTSVLEKNNT 290
>gi|256787962|ref|ZP_05526393.1| secreted protein [Streptomyces lividans TK24]
Length = 351
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 71/256 (27%), Gaps = 12/256 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G S GL VR G+ VG++ G+ LD + D +
Sbjct: 44 FGGGTTYSADFSESA-GLDEGDEVRIAGVKVGQVTGVALDG---AKVKVTFEVE-DAWIG 98
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
TTA I + + G Y+ L + + R + T S + + + +
Sbjct: 99 DRTTAAIAIKTVLGDKYLAL-------DPLGSGRQDPGARIPLARTTSPYDVTQAFQDLS 151
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + E I + ++ +T L++ I K S
Sbjct: 152 GTVDDIDTGRLAESFETISDTFKDSPPHVRKAATGLSDLSKSISKRDAKLSELLKGSARF 211
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
L ++ I ++ V D +
Sbjct: 212 TKTLENNKSSFETLIEDGGPLLGELRDRRTAISALLKGSQDLGTELGGLVEDNEKQLGPT 271
Query: 275 QEVGQKIDHLLSDFSS 290
+ ++ +L ++
Sbjct: 272 LKALGRVTSVLEKNNT 287
>gi|148261997|ref|YP_001236124.1| hypothetical protein Acry_3015 [Acidiphilium cryptum JF-5]
gi|326405506|ref|YP_004285588.1| hypothetical protein ACMV_33590 [Acidiphilium multivorum AIU301]
gi|146403678|gb|ABQ32205.1| Mammalian cell entry related domain protein [Acidiphilium cryptum
JF-5]
gi|325052368|dbj|BAJ82706.1| hypothetical protein ACMV_33590 [Acidiphilium multivorum AIU301]
Length = 329
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/313 (12%), Positives = 85/313 (27%), Gaps = 25/313 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME + GLFV+ + S P A SV GL S+V+F
Sbjct: 1 MEPRGAALRTGLFVIGAI--VVLVGLVFLLSGNMFRPGAVYESYFRESVQGLDVGSAVKF 58
Query: 61 NGIPVGRIVGL-------------FLDQEYPNHSLAKALIRPDT---------PLYPSTT 98
G+ +G++ + L+++ + + + I P +
Sbjct: 59 RGVTIGKVSEIGLVAADYPPPDPKNLNEKVYHQVVVQYRIDPRKLGRDADILEAIQHGLR 118
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ QG+ G+ Y+ELS + + + +I + PS + + +
Sbjct: 119 VQVAPQGITGLAYLELSFVNPQNNPPQSVPWTP-HHLVIPSVPSTLTEVQDAVQGFLNNM 177
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ LAN + ++ H + + +++
Sbjct: 178 RHVKLGRTIDTLTSMIDTVNRELTTGSAHEALANVNGLLVELKHQVRQADLPATTRSMRT 237
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
T + + + + V +
Sbjct: 238 LADGTQTREILQQLETTSAALAKASAAMPALIAQSEATIRHANEATAMVERQMLPILQSL 297
Query: 279 QKIDHLLSDFSSK 291
++ L D S
Sbjct: 298 KQASANLEDLSDT 310
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 15/187 (8%), Positives = 48/187 (25%), Gaps = 4/187 (2%)
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
V + L++ ++ + + + + S I +
Sbjct: 139 PQNNPPQSVPWTPHHLVIPSVPSTLTEVQDAVQGFLNNMRHVKLGRTIDTLTSMIDTVNR 198
Query: 321 ITDQRQKIISTINTIENITS-NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTF 379
+ N + + ++ + + + +
Sbjct: 199 ELTTGSAHEALANVNGLLVELKHQVRQADLPATTRSMRTLADGTQTREILQQLETTSAAL 258
Query: 380 RDTSEKINRYIPSIGNNL---QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
S + I + + + +++ L++ + +D + +RNP
Sbjct: 259 AKASAAMPALIAQSEATIRHANEATAMVERQMLPILQSLKQASANLEDLSDTLKRNPAAA 318
Query: 437 VWGREKG 443
+ GRE
Sbjct: 319 LRGREPP 325
>gi|271964521|ref|YP_003338717.1| resistance to organic solvents ABC transporter periplasmic
component-like protein [Streptosporangium roseum DSM
43021]
gi|270507696|gb|ACZ85974.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component-like protein
[Streptosporangium roseum DSM 43021]
Length = 355
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/105 (16%), Positives = 39/105 (37%), Gaps = 3/105 (2%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
FVV +L + + ++ + + ++ V GL V+ G PVG++ +
Sbjct: 20 FVVFLLVTATLIVLIGAQIARVNVGDTYSLVATFDDVSGLHEGDQVKIAGAPVGQVDSIE 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + ++ + ++A +R + G I L
Sbjct: 80 VV---DGRAEVVLSVQAAVRVPSDSSAAVRWRNTIGQRVIYLEPG 121
>gi|15843108|ref|NP_338145.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|215405537|ref|ZP_03417718.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|215413409|ref|ZP_03422093.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|215429002|ref|ZP_03426921.1| virulence factor mce family protein [Mycobacterium tuberculosis
T92]
gi|215432464|ref|ZP_03430383.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|215447829|ref|ZP_03434581.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|218755273|ref|ZP_03534069.1| virulence factor mce family protein [Mycobacterium tuberculosis GM
1503]
gi|219559563|ref|ZP_03538639.1| virulence factor mce family protein [Mycobacterium tuberculosis
T17]
gi|254366842|ref|ZP_04982883.1| MCE-family protein mce4D [Mycobacterium tuberculosis str. Haarlem]
gi|254552598|ref|ZP_05143045.1| virulence factor mce family protein [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260188548|ref|ZP_05766022.1| virulence factor mce family protein [Mycobacterium tuberculosis
CPHL_A]
gi|260202675|ref|ZP_05770166.1| virulence factor mce family protein [Mycobacterium tuberculosis
T46]
gi|260206863|ref|ZP_05774354.1| virulence factor mce family protein [Mycobacterium tuberculosis
K85]
gi|289555762|ref|ZP_06444972.1| MCE-family protein mce4D [Mycobacterium tuberculosis KZN 605]
gi|294995734|ref|ZP_06801425.1| virulence factor mce family protein [Mycobacterium tuberculosis
210]
gi|297636152|ref|ZP_06953932.1| virulence factor mce family protein [Mycobacterium tuberculosis KZN
4207]
gi|297733152|ref|ZP_06962270.1| virulence factor mce family protein [Mycobacterium tuberculosis KZN
R506]
gi|313660483|ref|ZP_07817363.1| virulence factor mce family protein [Mycobacterium tuberculosis KZN
V2475]
gi|13883454|gb|AAK47959.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|134152351|gb|EBA44396.1| MCE-family protein mce4D [Mycobacterium tuberculosis str. Haarlem]
gi|289440394|gb|EFD22887.1| MCE-family protein mce4D [Mycobacterium tuberculosis KZN 605]
gi|328460269|gb|AEB05692.1| MCE-family protein mce4D [Mycobacterium tuberculosis KZN 4207]
Length = 450
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 78/283 (27%), Gaps = 9/283 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V++++ +Y LS + I+ S GL VR G+PVG I +
Sbjct: 18 VIALVAALVGGVYVLSSTGNKRT-----IVGYFTSAVGLYPGDQVRVLGVPVGEIDMIEP 72
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF-QIATERN 132
+ D + A I + L +I+L+ + + + +
Sbjct: 73 RSSD---VKITMSVSKDVKVPVDVQAVIMSPNLVAARFIQLTPVYTGGAVLPDNGRIDLD 129
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ A+ A + S + + I L ++ LA
Sbjct: 130 RTAVPVEWDEVKEGLTRLAADLSPAAGELQGPLGAAINQAADTLDGNGDSLHNALRELAQ 189
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ T + + +D A Q + N+ +
Sbjct: 190 VAGRLGDSRGDIFGTVKNLQVLVDALSESDEQIVQFAGHVASVSQVLADSSANLDQTLGT 249
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ + + + T LSD S ++
Sbjct: 250 LNQALSDIRGFLRENNSTLIETVNQLNDFAQTLSDQSENIEQV 292
>gi|254527053|ref|ZP_05139105.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Prochlorococcus marinus
str. MIT 9202]
gi|221538477|gb|EEE40930.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Prochlorococcus marinus
str. MIT 9202]
Length = 281
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 77/283 (27%), Gaps = 6/283 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG ++ + F +WL + + GLS S V +
Sbjct: 1 MRRSLRDSIVGFSLLGGILIFTFFSFWLRGVRLSSKNWY--LFAEFNNASGLSKKSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI--TYIELSTLR 118
GI VG I + L + P+ L A + T G ++ +
Sbjct: 59 RGILVGSIEDI-LFTNESIKAKIVLN-NPEIILPRPAFARVVTNSFLGGDVQVALETSDK 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
K I + +E+ +I I ++ + IE L +
Sbjct: 117 TIPKNIAKPRSEKCDTKLIVCQGDTITGKQLSSLSNITNKISQLLKETNQENLIENILKS 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T + ++ + + N N I I + +
Sbjct: 177 IDQFDRTQENLDELIYLSKQEIQRVEPLIKEIRIAANHLNNILSSIDDKETLDDIKLTIN 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + Q +R+ T + +I
Sbjct: 237 AASSIATKIDDMSDDFEKLTQDKEFTKSIRDLTIGLSKFLNEI 279
>gi|254430514|ref|ZP_05044217.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Cyanobium sp. PCC 7001]
gi|197624967|gb|EDY37526.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Cyanobium sp. PCC 7001]
Length = 349
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/345 (10%), Positives = 82/345 (23%), Gaps = 11/345 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG +++ + + WL + V GL+ S V F
Sbjct: 1 MRRSVREAIVGFSLLAAVAGAVGFSLWLRGLS-LTRQFWTVEASFNQ-AAGLAARSPVVF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG + + + E +A+ I P L A + L G
Sbjct: 59 RGVMVGSVRSVRVTPE---AVIAELEITNPSLKLALPAKAVVGQGSLLGGEAQVSLVSTG 115
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ R+ T + + E T + + + + +
Sbjct: 116 TPME-TSAPSPRSADCPRTRMLCNGSRIKGSEEPTLGSVISRMEALLQQGDKEQLVQKFA 174
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
T + + + + T + L +++ A++ K
Sbjct: 175 GVASSVDKTSKDAAAFLEEGRALVGSLEQSVQEVQPTIANLNASSAHLRRLMAALENPKT 234
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
L+ ++ D V V+ + + + + +
Sbjct: 235 VAELQQTVSNAEQLTARWDAVGGDVN----KLTADPRFMDGLRSVAVGLGAFFEELYPAR 290
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ + + T +
Sbjct: 291 TAAAQDKAERERAAKGKGKEKETASGKATGQGSGAPTEAAQQGRS 335
>gi|15610632|ref|NP_218013.1| MCE-family protein MCE4D [Mycobacterium tuberculosis H37Rv]
gi|31794672|ref|NP_857165.1| MCE-family protein MCE4D [Mycobacterium bovis AF2122/97]
gi|121639415|ref|YP_979639.1| Mce-family protein mce4D [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663360|ref|YP_001284883.1| MCE-family protein Mce4D [Mycobacterium tuberculosis H37Ra]
gi|148824703|ref|YP_001289457.1| MCE-family protein mce4D [Mycobacterium tuberculosis F11]
gi|224991911|ref|YP_002646600.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800538|ref|YP_003033539.1| MCE-family protein mce4D [Mycobacterium tuberculosis KZN 1435]
gi|254234082|ref|ZP_04927407.1| MCE-family protein mce4D [Mycobacterium tuberculosis C]
gi|289445093|ref|ZP_06434837.1| MCE-family protein mce4D [Mycobacterium tuberculosis T46]
gi|289449198|ref|ZP_06438942.1| MCE-family protein mce4D [Mycobacterium tuberculosis CPHL_A]
gi|289571729|ref|ZP_06451956.1| MCE-family protein mce4D [Mycobacterium tuberculosis T17]
gi|289576230|ref|ZP_06456457.1| MCE-family protein mce4D [Mycobacterium tuberculosis K85]
gi|289747332|ref|ZP_06506710.1| MCE-family protein mce4d [Mycobacterium tuberculosis 02_1987]
gi|289752217|ref|ZP_06511595.1| MCE-family protein mce4D [Mycobacterium tuberculosis T92]
gi|289755626|ref|ZP_06515004.1| MCE-family protein mce4d [Mycobacterium tuberculosis EAS054]
gi|289759655|ref|ZP_06519033.1| MCE-family protein mce4D [Mycobacterium tuberculosis T85]
gi|289763676|ref|ZP_06523054.1| MCE-family protein mce4D [Mycobacterium tuberculosis GM 1503]
gi|298526976|ref|ZP_07014385.1| mce-family protein mce4d [Mycobacterium tuberculosis 94_M4241A]
gi|308232482|ref|ZP_07416183.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu001]
gi|308371367|ref|ZP_07424717.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu003]
gi|308372567|ref|ZP_07429086.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu004]
gi|308373764|ref|ZP_07433596.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu005]
gi|308374898|ref|ZP_07437784.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu006]
gi|308376147|ref|ZP_07446182.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu007]
gi|308377376|ref|ZP_07441996.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu008]
gi|308378350|ref|ZP_07482282.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu009]
gi|308379530|ref|ZP_07486625.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu010]
gi|308380717|ref|ZP_07490842.2| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu011]
gi|308406179|ref|ZP_07495393.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu012]
gi|2924433|emb|CAA17733.1| MCE-FAMILY PROTEIN MCE4D [Mycobacterium tuberculosis H37Rv]
gi|31620269|emb|CAD95712.1| MCE-FAMILY PROTEIN MCE4D [Mycobacterium bovis AF2122/97]
gi|121495063|emb|CAL73549.1| Mce-family protein mce4D [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124599611|gb|EAY58715.1| MCE-family protein mce4D [Mycobacterium tuberculosis C]
gi|148507512|gb|ABQ75321.1| MCE-family protein Mce4D [Mycobacterium tuberculosis H37Ra]
gi|148723230|gb|ABR07855.1| MCE-family protein mce4D [Mycobacterium tuberculosis F11]
gi|224775026|dbj|BAH27832.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322041|gb|ACT26644.1| MCE-family protein mce4D [Mycobacterium tuberculosis KZN 1435]
gi|289418012|gb|EFD15252.1| MCE-family protein mce4D [Mycobacterium tuberculosis T46]
gi|289422156|gb|EFD19357.1| MCE-family protein mce4D [Mycobacterium tuberculosis CPHL_A]
gi|289540661|gb|EFD45239.1| MCE-family protein mce4D [Mycobacterium tuberculosis K85]
gi|289545483|gb|EFD49131.1| MCE-family protein mce4D [Mycobacterium tuberculosis T17]
gi|289687860|gb|EFD55348.1| MCE-family protein mce4d [Mycobacterium tuberculosis 02_1987]
gi|289692804|gb|EFD60233.1| MCE-family protein mce4D [Mycobacterium tuberculosis T92]
gi|289696213|gb|EFD63642.1| MCE-family protein mce4d [Mycobacterium tuberculosis EAS054]
gi|289711182|gb|EFD75198.1| MCE-family protein mce4D [Mycobacterium tuberculosis GM 1503]
gi|289715219|gb|EFD79231.1| MCE-family protein mce4D [Mycobacterium tuberculosis T85]
gi|298496770|gb|EFI32064.1| mce-family protein mce4d [Mycobacterium tuberculosis 94_M4241A]
gi|308213826|gb|EFO73225.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu001]
gi|308329031|gb|EFP17882.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu003]
gi|308332870|gb|EFP21721.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu004]
gi|308336453|gb|EFP25304.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu005]
gi|308340331|gb|EFP29182.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu006]
gi|308344186|gb|EFP33037.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu007]
gi|308348116|gb|EFP36967.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu008]
gi|308352880|gb|EFP41731.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu009]
gi|308356693|gb|EFP45544.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu010]
gi|308360647|gb|EFP49498.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu011]
gi|308364264|gb|EFP53115.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu012]
gi|323717838|gb|EGB27029.1| MCE-family protein mce4D [Mycobacterium tuberculosis CDC1551A]
gi|326905338|gb|EGE52271.1| MCE-family protein mce4D [Mycobacterium tuberculosis W-148]
gi|328864238|gb|AEB53202.1| MCE family protein 4D [Mycobacterium tuberculosis]
Length = 451
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 78/283 (27%), Gaps = 9/283 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V++++ +Y LS + I+ S GL VR G+PVG I +
Sbjct: 19 VIALVAALVGGVYVLSSTGNKRT-----IVGYFTSAVGLYPGDQVRVLGVPVGEIDMIEP 73
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF-QIATERN 132
+ D + A I + L +I+L+ + + + +
Sbjct: 74 RSSD---VKITMSVSKDVKVPVDVQAVIMSPNLVAARFIQLTPVYTGGAVLPDNGRIDLD 130
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ A+ A + S + + I L ++ LA
Sbjct: 131 RTAVPVEWDEVKEGLTRLAADLSPAAGELQGPLGAAINQAADTLDGNGDSLHNALRELAQ 190
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ T + + +D A Q + N+ +
Sbjct: 191 VAGRLGDSRGDIFGTVKNLQVLVDALSESDEQIVQFAGHVASVSQVLADSSANLDQTLGT 250
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ + + + T LSD S ++
Sbjct: 251 LNQALSDIRGFLRENNSTLIETVNQLNDFAQTLSDQSENIEQV 293
>gi|157412651|ref|YP_001483517.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9215]
gi|157387226|gb|ABV49931.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9215]
Length = 281
Score = 75.4 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 77/283 (27%), Gaps = 6/283 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG ++ + F +WL + + GLS S V +
Sbjct: 1 MRRSLRDSIVGFSLLGGILIFTFFSFWLRGVRLSSKNWY--LFAEFNNASGLSKKSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI--TYIELSTLR 118
GI VG I + L + P+ L A + T G ++ +
Sbjct: 59 RGILVGSIEDI-LFTNESIKAKIVLN-NPEIILPRPAFARVVTNSFLGGDVQVALETSDK 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
K I + +E+ +I I ++ + IE L +
Sbjct: 117 TIPKNIAKPRSEKCDTKLIICQGDTITGKQLSSLSNITNRISQLLKETNQENLIENILNS 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T + ++ + + N N I I + +
Sbjct: 177 IDQFDRTQENLDELIYLSKQEIQRVEPLIKEIRIAANHLNNILSSIDDKETLDDIKLTIN 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + Q +R+ T + +I
Sbjct: 237 AASSIATKIDDMSDDFEKLTQDKEFTKSIRDLTIGLSKFLNEI 279
>gi|289627578|ref|ZP_06460532.1| toluene tolerance protein Ttg2C, putative [Pseudomonas syringae pv.
aesculi str. NCPPB3681]
gi|298488499|ref|ZP_07006529.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|298156840|gb|EFH97930.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330869990|gb|EGH04699.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv. aesculi
str. 0893_23]
Length = 155
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ T VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNIAGLTVRAKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD + I+ L +TA+I T GL G YI LS
Sbjct: 61 AGVTIGKVTAIDLDHDTFTG-RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVG-G 118
Query: 120 EKKTIFQIATERNQR 134
+ K + AT + +
Sbjct: 119 DDKLLKDGATIHDTQ 133
>gi|330998667|ref|ZP_08322397.1| hypothetical protein HMPREF9439_00010 [Parasutterella
excrementihominis YIT 11859]
gi|329576528|gb|EGG58036.1| hypothetical protein HMPREF9439_00010 [Parasutterella
excrementihominis YIT 11859]
Length = 336
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/321 (10%), Positives = 87/321 (27%), Gaps = 20/321 (6%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ VG+ +V ++ + + + Y P V SV+GLS + V+F GI +G
Sbjct: 9 HFWVGMSIVIVIAILIGLLCTV-FTPNYFRPKTIVETYFTESVNGLSPGAPVKFKGIDIG 67
Query: 67 RIVGLFLD----QEY----------PNHSLAKALIRPDT---PLYPSTTATIRTQGLAGI 109
++ + L + I + L +R Q
Sbjct: 68 KVTEISLSSKVYPDDHISLFSPDASVAVVRMIVYIDENQLKEQLPDLIQKGLRFQTELAG 127
Query: 110 TYIELSTLRKEKKTIFQIATERNQR--AMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ ++ P+ I+ EN ++ K
Sbjct: 128 VTGTIYLAANFLNPTLYPPEIKDVPWKPKYIYVPATISLTNEILENIQHFLATLQNIKTK 187
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
I + + T + ++ DK+ + +S ++ + D+
Sbjct: 188 IDDVTPDAVKTQSTKELLTTLNNTVSMLDPDKLHTLLSNAENYVNSSHSILSKVDVARVN 247
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + + + S + + + + + +E+ + + +
Sbjct: 248 SLLSELTKTTEKLNTTLHETKGSGLVTQLNKTISGADQAIVDNRYNIRELILNLKDISDN 307
Query: 288 FSSKMKSKETSAFLENIADST 308
+S
Sbjct: 308 LKILSESLAQDPNFLAPRPHH 328
>gi|303279751|ref|XP_003059168.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
gi|226459004|gb|EEH56300.1| ATP-binding cassette superfamily [Micromonas pusilla CCMP1545]
Length = 331
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/281 (11%), Positives = 81/281 (28%), Gaps = 5/281 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF++ + + + W+ N + + P G+ + VR G+ VG ++
Sbjct: 47 VGLFILGGMALTALVVNWVLGVNFNKMRSYQAFVEFPF-ACGIQVGTQVRVRGVKVGNVL 105
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + E + D + ++ GL T I+++ K +
Sbjct: 106 SVRPNLE---RVEVLVEMDDDGIVIPRNSLVEANQSGLIAETIIDITPEIPIPKAQWGPL 162
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + G + + + + T + +
Sbjct: 163 DSGCEGEGLVVCDRGKIQGTPGVSMDELVGICTKLAREMDSNDGIAKMFATAETAQDLMK 222
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
L + ++ + + + T +TI L K + I K + ++ Q
Sbjct: 223 NLEPLLLEAAEIAKELRPMLQNVQEQGTLDTIELLAGHATKAVTDIRELKRTILTDDNQE 282
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + + V + +L
Sbjct: 283 MLRQSITIMTKTLQHMEKVSGDISSVSGDPATRQNLRHLIQ 323
>gi|315442592|ref|YP_004075471.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260895|gb|ADT97636.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 565
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 52/133 (39%), Gaps = 5/133 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F + + ++++L V G+ +++V
Sbjct: 1 MLDRLTRIQLSIFAIVTVLSVGAVALFYLHVPAAVGIGAYNVTANFVA-GGGIYQNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
F G+ +G + + L +A+ + DTP+ + TAT+++ G YI+L
Sbjct: 60 FRGVTIGHVESVGLSDNS---VVARMQLNSDTPVPENVTATVKSVSAIGEQYIDLVPPED 116
Query: 120 EKKTIFQIATERN 132
+ + + ++
Sbjct: 117 ASQQMLRDGSDIG 129
>gi|237798607|ref|ZP_04587068.1| mce-like protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021460|gb|EGI01517.1| mce-like protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 155
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ T VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNLAGLTVRAKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG++ + LD++ I+ L +TA+I T GL G YI +S
Sbjct: 61 AGVTVGKVTAIDLDRDTFTG-RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGISVGGD 119
Query: 120 EKKTIFQIATERNQ 133
+K Q
Sbjct: 120 DKLLKDGGTIHDTQ 133
>gi|326331670|ref|ZP_08197958.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950469|gb|EGD42521.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 347
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 5/130 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
Y +G F + F++ + G + V+GL + +VR G+
Sbjct: 15 ATYLKLGAFTLV--AGLAFALVLGTLKAPVAGDLVTYTAEF-ADVNGLHEEDAVRIAGVS 71
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + + + + + + + ++R Q +AG ++ + R K +
Sbjct: 72 VGKVTDITVTA--AGKATVELTVSRKQQVLDTARLSVRYQNIAGQRFLGIEQTRGSGKPL 129
Query: 125 FQIATERNQR 134
A R
Sbjct: 130 AAGARIPATR 139
>gi|330891013|gb|EGH23674.1| PqiB family protein [Pseudomonas syringae pv. mori str. 301020]
Length = 522
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/421 (9%), Positives = 111/421 (26%), Gaps = 36/421 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S V + I VG++V L ++ + D
Sbjct: 130 FGAKGTRFTLH-AEDMGSLDVGSPVYYRRIQVGQVVACHLSEDGKGVDAEIFINAPNDRF 188
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + L + T+ + ++ P +
Sbjct: 189 VTTDTRFWNASGIGLTVDADGLKIKTESVSTLLAGGVAFVEPGYGSSAPRAAEHARFKLF 248
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+K I + + + + + N + + + S
Sbjct: 249 EDQQKALSPPDGEPGYIRMMFRQSLRGLEVNSPVEFMGINLGRVVSVDLDYDAASKSFSS 308
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
L + +K+++ + ++ + I +++ + + +
Sbjct: 309 IVGAVIYPDRLGRANEKILETLGTPDDSRTAQLIADFVKQGLRAQPRSASLLTG------ 362
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
L + + + + ++E + +S +
Sbjct: 363 ----------QLYISLGFFANAAPVQFDVNARPLIIPTVPGELEKMQEQVQLIVEKVSKL 412
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
++ I NLN S + + N + + + R T E +
Sbjct: 413 P-VQEIAGNLNGSLDEAYKTFKLFNA--------DVVPELHTVLGQSRSTMEMAGAALAE 463
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI-YKPK 451
+ + ++Q T + RNP+ ++ GR + V Y P
Sbjct: 464 --------DSPVRQQVNRTMDEVQRTARSVRVLTDYISRNPEALIRGRTRQDVPSVYTPA 515
Query: 452 H 452
+
Sbjct: 516 N 516
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ DG + + S+ GL +S V F GI +GR+V + LD +
Sbjct: 255 LSPPDGEPGYIRMMFRQSLRGLEVNSPVEFMGINLGRVVSVDLDYD 300
>gi|229490752|ref|ZP_04384590.1| secreted protein [Rhodococcus erythropolis SK121]
gi|229322572|gb|EEN88355.1| secreted protein [Rhodococcus erythropolis SK121]
Length = 415
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 47/124 (37%), Gaps = 5/124 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG VV++L + ++ N V + S G+ T++ V + G+PVGR+
Sbjct: 10 LVGFVVVALLGLIYVGAKYVRLDNLMGFGQYTVKTELATS-GGIFTNAEVTYRGVPVGRV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L ++ I P + S A + + G Y++L + +
Sbjct: 69 GDMSLTEDG---IQVDLKIDNSAPEIPASARAVVANRSAIGEQYVDLQPDTDQGPFLEDG 125
Query: 128 ATER 131
+
Sbjct: 126 SVIA 129
>gi|23011785|ref|ZP_00052044.1| COG1463: ABC-type transport system involved in resistance to
organic solvents, periplasmic component
[Magnetospirillum magnetotacticum MS-1]
Length = 230
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/227 (11%), Positives = 69/227 (30%), Gaps = 11/227 (4%)
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ I + + + ++ D + V ++ +
Sbjct: 1 MPTIFADSSDIQDMMAAAKQIAQRADDVLQRLDKVVAGNEGAINRTLANVEAFSKTLAEA 60
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
S + + ++ + + I + ++ + + L+ S+ +
Sbjct: 61 GPSIAGLVKAVDGQRLNRVIENADTFSASLAKSGPDIEAGLHDARVLAAKLSASADRIDG 120
Query: 352 LMSKINNISALK----------ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
++ E + A FR SE +++ +I + S
Sbjct: 121 VLKGAEGFLGSASGQQGAGTFAEIREAAISVRDAGKAFRTLSENLDKRTANISTSFNRLS 180
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ +++ L Q T+N + ER+P +++G K S+ Y
Sbjct: 181 GTSRREVEALSTDGQRTLNTLSRAARSLERDPSQVIFGG-KPSLPEY 226
>gi|262377331|ref|ZP_06070555.1| toluene tolerance efflux transporter [Acinetobacter lwoffii
SH145]
gi|262307784|gb|EEY88923.1| toluene tolerance efflux transporter [Acinetobacter lwoffii
SH145]
Length = 225
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S+ +VG+FV+ FF +S ++ + + +V+G+ + V
Sbjct: 1 MKSRTSELAVGVFVILFAIALFFLAMRVSGLVGHNISDSYKMTATFENVNGIKPRAKVAL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+G+ VG++ + LD + +
Sbjct: 61 SGVKVGQVDDITLDPVT-RLATVHMTLDGSL 90
>gi|300782540|ref|YP_003762831.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|41581804|gb|AAS07748.1| putative secreted protein [Amycolatopsis mediterranei S699]
gi|299792054|gb|ADJ42429.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 421
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 43/134 (32%), Gaps = 4/134 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + FVV + +++ + G + G+ T++ V +
Sbjct: 1 MLIRRTKIQLIAFVVISVVAIVYALIRFAGLGSVFGNDGYTVKLQLNESGGIFTNAEVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G +GR+ + L A I P P + A + + G Y++L
Sbjct: 61 RGYNIGRVGEMRLTATG---LEADLNIDPSAPKVPADLDAVVANRSAVGEQYVDLKPKAD 117
Query: 120 EKKTIFQIATERNQ 133
+ + +
Sbjct: 118 QGPYLAAGSVIPAT 131
>gi|262202874|ref|YP_003274082.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262086221|gb|ACY22189.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 390
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 71/279 (25%), Gaps = 6/279 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSN-QYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ + +G + ++ F+ Q + I P S GL S V G
Sbjct: 9 RKHSVLLGNLALIVVMLIGFAYLAFGTLRWQPFTGKYHLTINFPIS-GGLQDTSRVTLRG 67
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG + + + K + D + + AG Y++ +
Sbjct: 68 TKVGDVDSIRVQPNS---VQVKVSVDDDVKINRNAVVAALGLSAAGEQYVDFQPPSADGP 124
Query: 123 TIFQIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
T Q + T P + + E + S +
Sbjct: 125 YFADGDTINAGQTRVTTPFPQLLESSLDLIEQIDPQKLRSIIDNLNTAVTSDDGQNQLHT 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
++ T+ A+ + + Q + + S I + +
Sbjct: 185 LFDSGGTIFASLYRVLPQTTKLIQDSGTILKTTAGIQPDLGTTVSSISSIVNAAVASDKE 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
I + + + + + +V ++
Sbjct: 245 IRTLLDRGPTQLTSLTGSLGQLNDPLADLLTQMLDVARQ 283
>gi|117164589|emb|CAJ88135.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
Length = 367
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/291 (13%), Positives = 91/291 (31%), Gaps = 10/291 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+V + + +L Y R + G GL VR G+ V
Sbjct: 32 NPVAVAIVGLLLLALLTVFAYNADRLSLTGGGTT-YTADFTE-AAGLDAGDEVRVAGVKV 89
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + LD + + D + TTA I + L G Y+ L L ++
Sbjct: 90 GEVTSVALDGD---RVKVTFEVE-DAWIGDRTTAAIAIKTLLGDKYLALDPLGSARQDPG 145
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + T + + + ++++++S I + E + +
Sbjct: 146 ARIPKTRTTSPYDVTQAFQDLSGTVDAIDTQQLAESFETISQTFEKSPPHVRKAATGLSD 205
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S ++ + +++ + + +SK ++ +LE
Sbjct: 206 LSRTVSKRDRELSELLKGSARFTKTLESKKAGFETLIEDAGPLLGELRDRRDAISALLEG 265
Query: 246 IQVSSNNF----VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + Q+ T+ + T ++ G ++D L+
Sbjct: 266 SRDLGTELGGLVADNDKQLDPTLKALGRVTTVLEKNGTQLDKTLALVGPYY 316
>gi|319951380|ref|ZP_08025205.1| virulence factor Mce family protein [Dietzia cinnamea P4]
gi|319434977|gb|EFV90272.1| virulence factor Mce family protein [Dietzia cinnamea P4]
Length = 351
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 91/293 (31%), Gaps = 10/293 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ + +F + + S G V GL T VR G
Sbjct: 11 SRATLVKLAIFTTVMALVLAALVVVFSEYR--SGDYERYNAAFTD-VSGLETGDKVRIAG 67
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG++ + L + + + + D ++ ST A +R + L G Y+EL ++
Sbjct: 68 VEVGKVDRIDLAEGNT--ADVRFTVAGDQIVHVSTEAVVRYENLTGDRYLELRRGEGDQS 125
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ E I+ T ++ + + ++ E+I K
Sbjct: 126 PL-----EPGGSLPISQTSPALDLDALLGGFRPLFRALDPGQVNQLSESIVKVFQGEAGT 180
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
++ + ++ I + ++ T + ++
Sbjct: 181 VQDLLASTSSLTQTIADRDQLIGDVITNLNAVLTTVADNQENVDTIVDDLQQLVSGLSAN 240
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
I S +S + + DVR + ++ L+++ +++
Sbjct: 241 SNQIGESVTRLNDASANMTTLLADVRPALREDVAQIDRVAQLINEDEPFVENV 293
>gi|167031982|ref|YP_001667213.1| hypothetical protein PputGB1_0967 [Pseudomonas putida GB-1]
gi|166858470|gb|ABY96877.1| Mammalian cell entry related domain protein [Pseudomonas putida
GB-1]
Length = 161
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 57/135 (42%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSASPSSDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSYTG-RVTLQLDKSVDNLPTDSTASILTAGLLGEKYIGISVG-G 118
Query: 120 EKKTIFQIATERNQR 134
E + + + AT + +
Sbjct: 119 EDQVLKEGATIHDTQ 133
>gi|293602527|ref|ZP_06684973.1| hypothetical protein HMPREF0004_0549 [Achromobacter piechaudii ATCC
43553]
gi|292819289|gb|EFF78324.1| hypothetical protein HMPREF0004_0549 [Achromobacter piechaudii ATCC
43553]
Length = 310
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 3/125 (2%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+F + +L + W+ R + I +V GL+ S+VR+ G+PVG++
Sbjct: 3 GIFTLVLLAAAALVAVWIGRDR---TKLQPYEIISATAVSGLNPQSAVRYQGVPVGKVQS 59
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
L L+ + P + + P+TP+ ST A + QG+ GI +EL K + A
Sbjct: 60 LALNPDKPGQVRIRIGVAPNTPITESTWAELGVQGVTGIANVELRDDGSSIKRLASSAEH 119
Query: 131 RNQRA 135
Sbjct: 120 PAAIP 124
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 21/167 (12%), Positives = 55/167 (32%), Gaps = 6/167 (3%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ Q+ LLS+ + +N+ T++++++ + + D + + T+
Sbjct: 129 FLDRIEQRGGKLLSNVEEATEQLRRVLSEQNVQALTASLQNATDITQSLRDASRDLGPTL 188
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
I + +L +S++ +I + + A ++ R +
Sbjct: 189 AKIGPLVDSLGSTSRQADRAAREI------ADLAQQSRQALARLNAPDGPLSVATRSLND 242
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
I L + N+ + L + PQ ++G
Sbjct: 243 IALAAARLDGETLPAVTNMAANVSAAARGATITLRRVDSTPQSFLFG 289
>gi|296139951|ref|YP_003647194.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
gi|296028085|gb|ADG78855.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
Length = 350
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/283 (15%), Positives = 102/283 (36%), Gaps = 6/283 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +VG + +L + S +++ R G GL + VR G+
Sbjct: 18 RRSPVTVGAMGIVVLLMATASAFFIDRLPLI-GAGTTYTALFSE-AAGLLPSNEVRVAGV 75
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + + LD + + + D L +T+A+I+ + + G Y+ L +
Sbjct: 76 KVGTVQAVELDTKA-AKAKVTFRAK-DVWLGENTSASIQIKTVLGQKYVALEPRGANRLD 133
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENT--SKKISDSSRHIQKIIENIEKPLTTTIA 181
+ T+ + A S + I + T + + + ++ N+ + LT
Sbjct: 134 PQRPITDTTSPYDVVAAFSDASASIDKTDTTKLAASMRTLADAFRETPPNVRESLTGITR 193
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
ETI+ +D+ T+++ +++ T T L+ + + + +
Sbjct: 194 LSETINKRDEELQRLLDQAGKTSKILADRTETFRTLITDAGLLLTTLNQRQDDITRLLRT 253
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + Q+ + +R+ Q Q+ + ++
Sbjct: 254 TQSLSTTLTGIVRDNEQQIGPALASLRQVVQLLQDNKKGLEST 296
>gi|297191131|ref|ZP_06908529.1| MCE family protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197721746|gb|EDY65654.1| MCE family protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 385
Score = 75.0 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/357 (10%), Positives = 94/357 (26%), Gaps = 15/357 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
VV ++ + W V P +V G+ S VR G+ VG + +
Sbjct: 19 AAVVGVMLVCAAVVLW------PREEPVRVTAYFPRTV-GIYPGSDVRVLGVRVGEVTEI 71
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + P + A I + Y+++ + + + A
Sbjct: 72 VPEG---GRVRVELEYEPGRKVPADAQAAIINSSVVSDRYVQMLPVYRGGPVMRDGAVIP 128
Query: 132 NQRAM-----ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
R S + + K SR + N++ +E +
Sbjct: 129 QSRTAVPVELDRVFDSLHTTAEALGPKGANKDGSLSRLLGVSAGNLDGQGEQMHRTVEDL 188
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S + + T + + + + + + + +
Sbjct: 189 SLAVTTLSDGRQDLFGTVRNLQVFTAALAADDKSVRSFNDSLAAVADQLAGERKDLAAAL 248
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ S V N + E + +V + + + + ++ T A
Sbjct: 249 KHLGVALGDVSRFVKNNKKALTEDVKGLSKVTKVLVTQRAALAELLEVAPTGLSNLQNAY 308
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ S+ + ++ ++ N + +L + + A
Sbjct: 309 NPSSGTLDTRNNPDHPQDPAALLCSLLKTTGDAGGENPDCAELDKLFDSLPEVPASG 365
>gi|260434669|ref|ZP_05788639.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Synechococcus sp. WH
8109]
gi|260412543|gb|EEX05839.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Synechococcus sp. WH
8109]
Length = 286
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 39/113 (34%), Gaps = 6/113 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG V+ + + WL + R GL+ S V +
Sbjct: 1 MRRSVRDAIVGFTVIGGIIGCSSAALWLRGV-HLGLSHWTLTARF-NDAAGLAERSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYI 112
GI VG + + + E +A+ I D L TAT+ + L G +
Sbjct: 59 RGILVGSVRSILVTSES---VVAELEINKADLRLPLPVTATVGSASLLGGSAR 108
>gi|118473126|ref|YP_884764.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118174413|gb|ABK75309.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 495
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 3/140 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F V + F I+ ++ G + GL +V
Sbjct: 1 MIHRRTKIQLAIFCVIAVVFGTVMIFGYMRLPAHLFGIGLYTVNLDLDRTGGLYPTGNVT 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G VGR+ + L + A ++ + A + +Q G Y+EL
Sbjct: 61 YRGTEVGRVESVGLSEN--GGVRAVLKLKSGIDIPSDLRAEVHSQSAIGEQYVELLPRSA 118
Query: 120 EKKTIFQIATERNQRAMITA 139
+ + I
Sbjct: 119 AAPPLQDGDVIAAKDVFIPP 138
>gi|89076554|ref|ZP_01162864.1| putative paraquat-inducible protein B [Photobacterium sp. SKA34]
gi|89047788|gb|EAR53386.1| putative paraquat-inducible protein B [Photobacterium sp. SKA34]
Length = 547
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/406 (8%), Positives = 96/406 (23%), Gaps = 31/406 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ LS V ++G VGR+ D ++ +
Sbjct: 161 VVLTSHQAGKLSVGDPVLYDGFTVGRVEKTNFDINSKLA-------NYQLFIFEPYNRLV 213
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
RT + + E + + E + + +
Sbjct: 214 RTTSNFIMQSGMNVQMSAEGFNVKIGSLES---------LITGGVTFQTPSDEQGVVQNK 264
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ + + + +I + K +
Sbjct: 265 QLTHYRLYNSEKDYRQKMYDKSLKFVMLFKESIRGLKAGAPIEYRGIQIGTVKKVPLRLP 324
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + N ++ +R T + + +
Sbjct: 325 TSEEGFTSEQIPVLVRIDLGRVYNHSNEGTLAGLRANFEKEFQKGLRATLKPGSLLTGAL 384
Query: 282 ---DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
+ D + K + + I T+N++
Sbjct: 385 YIGTDVYKDEKPEKAMKYDGYDVFPTKTGDLAEVQKQLTSMLTKFNKLPIEDTLNSMTAT 444
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ A++ ++ I K+ +L D + ++ + T +
Sbjct: 445 LKASEKTMNSAAKVTKDLDRILKQKDTQTLPSDIKASLKEIQATLNGFSPNSAP------ 498
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+Q+ + + ++ + L P +V+G EK
Sbjct: 499 ------YQSLQSSLEQFEQVMTELKPVLRQLNEKPNSLVFGDEKAK 538
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 25/264 (9%), Positives = 66/264 (25%), Gaps = 16/264 (6%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------DQEYPNHSLAKALIRPDTPLY 94
++ S+ GL + + + GI +G + + L + I
Sbjct: 289 FVMLFKESIRGLKAGAPIEYRGIQIGTVKKVPLRLPTSEEGFTSEQIPVLVRIDLGRVYN 348
Query: 95 PSTTATIRTQGLAGIT-YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
S T+ + + + ++ A P +
Sbjct: 349 HSNEGTLAGLRANFEKEFQKGLRATLKPGSLLTGALYIGTDVYKDEKPE---------KA 399
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
D + ++K LT+ + + N + + +
Sbjct: 400 MKYDGYDVFPTKTGDLAEVQKQLTSMLTKFNKLPIEDTLNSMTATLKASEKTMNSAAKVT 459
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
K+ + T L+++ L +S + + + E
Sbjct: 460 KDLDRILKQKDTQTLPSDIKASLKEIQATLNGFSPNSAPYQSLQSSLEQFEQVMTELKPV 519
Query: 274 FQEVGQKIDHLLSDFSSKMKSKET 297
+++ +K + L+
Sbjct: 520 LRQLNEKPNSLVFGDEKAKDPIPL 543
>gi|294788756|ref|ZP_06753997.1| mce family protein [Simonsiella muelleri ATCC 29453]
gi|294483238|gb|EFG30924.1| mce family protein [Simonsiella muelleri ATCC 29453]
Length = 171
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/119 (21%), Positives = 43/119 (36%), Gaps = 3/119 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWL--SRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ VGLFV+ + + + R V+ + GL ++ +
Sbjct: 1 MKKSILEFWVGLFVLLGVLALAVLSFRVAGGRDGFSGSSKNYVLYAEFSDIGGLKVNAPI 60
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
R G+ VGR+ + LD + + + +A I T GL G YI L
Sbjct: 61 RSAGVLVGRVNQITLDPQTY-QAKVTLNVENQYKFSSDVSAQILTSGLLGEQYIGLVQG 118
>gi|281356268|ref|ZP_06242761.1| Mammalian cell entry related domain protein [Victivallis vadensis
ATCC BAA-548]
gi|281317637|gb|EFB01658.1| Mammalian cell entry related domain protein [Victivallis vadensis
ATCC BAA-548]
Length = 339
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/293 (13%), Positives = 102/293 (34%), Gaps = 7/293 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ +G F++ + + + +Q P + + SV+GL+ S V++ G
Sbjct: 2 NEANKVKLGAFLLISITLLITAFL-AAGISQIFSPKFHAVTILNTSVEGLAVGSPVKYLG 60
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+P+G+I + + +E I P + T + +
Sbjct: 61 MPIGKITRMAM-RENDGCVAVYFDIFPAAVETEDSDDDTGTVADIANIMHRKNLMCFINA 119
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
T ++ P+ + S S S I N
Sbjct: 120 AGIMGGTYLELSINESSQPALPHLEFKPQPGVSYIPSRPSHIGNAIQNISRMLDELEKVN 179
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
++ L + +++ +++ +++ N +T+ + + L ++ +++K+N+
Sbjct: 180 FIQLADKLNQTLDNMNDILNQSELRSTLKSVNNICSTLENTVQRLQTVLSDANVEKLNRS 239
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++NI +S N ++ + ++ T + + +L+ S K
Sbjct: 240 IDNIDISVQNLKRTV-----SSDELSATVKNLNQFLTDARRVLNSAESSGKQL 287
>gi|183984676|ref|YP_001852967.1| MCE-family protein [Mycobacterium marinum M]
gi|183178002|gb|ACC43112.1| MCE-family protein [Mycobacterium marinum M]
Length = 360
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 80/287 (27%), Gaps = 8/287 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G + + L+ + GL+ + V +GI
Sbjct: 7 AGLIRAGF--IGAVLIVLVIAVGLNPEQLLQRATTVRYQALFSDAGGLAVGNDVTVSGIK 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + G+ L L + L +TA IRT L G + + +
Sbjct: 65 VGTVSGMSLQ---RGDVLVTFTVNGGVELGADSTAHIRTGSLLGQRVLTVESAGGHTLRP 121
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + + + A + ++ S + + + I L + +
Sbjct: 122 MAVIPVSRTSSPYSLSEAVSDAATDIAGTNTDALNQSLDTLSETLNQIAPQLGPSFDGLT 181
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+S L + +++ ++ L + Q + ++L
Sbjct: 182 RLSQALNGRNQTLGELLKGAADVTGILSQRSQQLNTLILNADDLLSMLVARRQAIVRLLA 241
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + V + + T + V ++ + +
Sbjct: 242 STSAVAKQLS---GLVHDNESKLAPTLERLNAVTAMLEKNRDNLAKA 285
>gi|72383491|ref|YP_292846.1| putative ABC transporter [Prochlorococcus marinus str. NATL2A]
gi|72003341|gb|AAZ59143.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Prochlorococcus marinus
str. NATL2A]
Length = 281
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG ++ L ++ WL + E+ GL+ S V +
Sbjct: 1 MRRSLRDAFVGFSLLGGLVIFSGAMLWLRDF-RLGSKTWEISASFKD-ASGLAKMSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGI 109
GI VG + + K I D L A I T + G
Sbjct: 59 RGIIVGSVQNISFTPNT---VETKIKINNDNLILPKPVIAKIVTSSMLGG 105
>gi|326331734|ref|ZP_08198022.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950533|gb|EGD42585.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 329
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/324 (11%), Positives = 93/324 (28%), Gaps = 11/324 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+ + + + + + L + + G + GL + V GI VGR+
Sbjct: 13 GVITIVAIALALTAAFNLRKLPWFAGTTYQAE---FSDTSGLHVGNRVEIAGIRVGRVSD 69
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK----KTIFQ 126
+ +D + + T + + A I L G Y++++ I
Sbjct: 70 IEIDG---AKVVVSFSVE-GTEIGHRSEAKIGVLNLLGEKYLDITPQGGRTLDAGSRIPL 125
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
T + T + + +K ++ S + K ++ A +TI
Sbjct: 126 ARTSAGSDIVGTFGDLAETTEAIDTQQLAKALTTMSGTLDKAGPEVQGAFQGIAALSQTI 185
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ S + Q+ D + + + Q +
Sbjct: 186 AARGDELESLLQDAEKVVQLVNERKQDIIGVMENGDQVFAELIQRRQAIHQLLVNATALA 245
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ ++ Q+ + + + + + + + ++ D
Sbjct: 246 EQLQALVKENQKQIGPALDALEQALKFLNARDEDLTKTIQNYGPYASILINIIGTGPWFD 305
Query: 307 STSNMRSSISAIREITDQRQKIIS 330
+ + I + + +R I+
Sbjct: 306 AYLANLTGIVSGEFVPGRRPGIVQ 329
>gi|172064287|ref|YP_001811938.1| hypothetical protein BamMC406_5278 [Burkholderia ambifaria MC40-6]
gi|171996804|gb|ACB67722.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
MC40-6]
Length = 531
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/452 (9%), Positives = 117/452 (25%), Gaps = 58/452 (12%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEV-----------------IIRIPGSVDG 51
VG +S L Y + + + + S+
Sbjct: 113 RVGATGISGLGTLLSGAYIGADLGRSPHKQTDFAGLETPPAVTADQQGRRYLLHGDSLGS 172
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S V + + VG++VG LD++ + Q Y
Sbjct: 173 IDIGSPVFYRHLQVGQVVGFSLDKDGTG---------------------VDVQAFVKAPY 211
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKII 169
+ + + + T S + ++ ++
Sbjct: 212 DKYVGTNTRWWHASGVDLRLDSNGLKLNTQSLATVVVGGLAFQSPPEQADAPPAADNASF 271
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
T V+ + + V N +
Sbjct: 272 RLAPDQAEAMRDPDGTPLMVVMRFDQSLRGLSVGAPVDLRGIALGQVTNIGIEYNEHSRT 331
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSDF 288
+ + L ++ ++ H V + + G + L
Sbjct: 332 FSMKVTMALYPSRLSRHSDTALPAPDTAGGHDLLEHLVLQGLRGQLRTGSLLTGQLYVAL 391
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
K+ S + + +++ ++ + + + + I ++LN + +
Sbjct: 392 DMFPKAPRASVDVHRTPVELPTVPNTLDELQVQLADIARKLDKVP-FDQIGNSLNGALEH 450
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+L ++ + A+ + + T + + +D+
Sbjct: 451 ANQLFGHLDE--------QVVPQARDTLAAAQRTFDAAQATLRQ--------DSPMQSDV 494
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ ++ L T+ + + ER+P+ +++G+
Sbjct: 495 HDAMQSLTHTLQSLNTLADYLERHPEALLFGK 526
>gi|296138970|ref|YP_003646213.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
gi|296027104|gb|ADG77874.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
Length = 344
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 52/137 (37%), Gaps = 7/137 (5%)
Query: 1 MES-KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+S K+ + +F ++ ++ L + G + V GL VR
Sbjct: 1 MKSIKSTAIKIAIFAALMILILVLTMQAL--TRPPAGKLDTFHADFKD-VSGLKVGDDVR 57
Query: 60 FNGIPVGRIVGLFLDQEYPNH---SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
G+ VG++ + + Q + + ++ D T IR Q L G ++E+ T
Sbjct: 58 MLGVQVGKVTDVAVQQSSDHRLSNASVSFTVQRDRKFRADDTLAIRYQNLTGSRFLEVQT 117
Query: 117 LRKEKKTIFQIATERNQ 133
K I Q T ++
Sbjct: 118 NAKSTAPIVQAGTTIDE 134
>gi|26987696|ref|NP_743121.1| hypothetical protein PP_0960 [Pseudomonas putida KT2440]
gi|24982382|gb|AAN66585.1|AE016286_9 toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Pseudomonas putida KT2440]
gi|18149138|dbj|BAB83591.1| hypothetical protein [Pseudomonas putida]
gi|313497329|gb|ADR58695.1| Ttg2C [Pseudomonas putida BIRD-1]
Length = 161
Score = 75.0 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 56/135 (41%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSASPSSDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSYTG-RVTLQLDKSVDNLPTDSTASILTAGLLGEKYIGISVG-G 118
Query: 120 EKKTIFQIATERNQR 134
E + + AT + +
Sbjct: 119 EDEVLKDGATIHDTQ 133
>gi|328880851|emb|CCA54090.1| virulence factor mce family protein [Streptomyces venezuelae ATCC
10712]
Length = 424
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 47/139 (33%), Gaps = 7/139 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M ++ F+V + F + +Y G V + + + GL T S V
Sbjct: 1 MITRTVRLKNLAFLVIAVLVLGFVGVRYADLGRYAGVADHYTVRVHLART-GGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + +A+ I+ P + A + G YI+L
Sbjct: 60 TYRGVSVGRVGAIDLTADG---VVAELRIKKSAPAIPADARAVVAGLSAVGEQYIDLRPE 116
Query: 118 RKEKKTIFQIATERNQRAM 136
+ A
Sbjct: 117 SDAGPFLADGARIEQSDTQ 135
>gi|269200090|gb|ACZ28673.1| Ttg2C [Pseudomonas putida]
Length = 161
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSASPSSDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSYTG-RVTLQLDKSVDNLPTDSTASILTAGLLGEKYIGISVG-G 118
Query: 120 EKKTIFQIATERNQR 134
E + AT + +
Sbjct: 119 EDDVLKDGATIHDTQ 133
>gi|324998177|ref|ZP_08119289.1| putative secreted protein [Pseudonocardia sp. P1]
Length = 431
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 4/137 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K + + + ++ + + ++ G + G+ T + V +
Sbjct: 1 MITKTVRWQLIALAIVTIVGVGYAGFRYAGLDRIFGATTYPVTVQMADSGGIFTGADVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ L L Q + I +P + T A + G Y++L +
Sbjct: 61 RGVSVGRVGPLSLSQSG---VDVQLDIANGSPEIPADTRAVVGNLSPIGEQYVDLQPVAD 117
Query: 120 EKKTIFQIATERNQRAM 136
+T+ A +R
Sbjct: 118 GGETLAAGAVIPQERTQ 134
>gi|120401393|ref|YP_951222.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954211|gb|ABM11216.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 481
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 46/130 (35%), Gaps = 6/130 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRS--NQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + +F V L ++ + + VI+++ + GL + +V +
Sbjct: 5 RRIKIQLAIFAVIALAAMAIMVFQFMKLPAQLFGVGRYTVIMQLSKT-GGLYSTGNVTYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L + A ++ + A + +Q G Y+ LS
Sbjct: 64 GTEVGRVQEVRLTDDG---VEAVLSLKSGIEIPSDLEAEVHSQSAIGEQYVALSPRNGSS 120
Query: 122 KTIFQIATER 131
+ + +
Sbjct: 121 RPLREGDVIT 130
>gi|148241319|ref|YP_001226476.1| ABC-type transport system, periplasmic component [Synechococcus sp.
RCC307]
gi|147849629|emb|CAK27123.1| ABC-type transport system, periplasmic component [Synechococcus sp.
RCC307]
Length = 298
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 42/110 (38%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++G +++ L +WL+ + + +R GL+ S V +
Sbjct: 1 MRRSVREATIGFSLLAALVGGLGLWFWLTGV-VFGQKTYSIRLRF-QDAAGLAPQSVVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGI 109
G+PVG + + + +A I LY TA IR+ L G
Sbjct: 59 QGVPVGSVHSVTPEA---GWVAVEAKINDRSLKLYRPITAQIRSGSLLGG 105
>gi|330958006|gb|EGH58266.1| toluene tolerance protein Ttg2C [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 155
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 54/134 (40%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ T VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDTYKLYAYFDNLAGLTVRAKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ I+ L +TA+I T GL G YI LS
Sbjct: 61 AGVTIGKVTAIDLDRDTFTG-RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVGGD 119
Query: 120 EKKTIFQIATERNQ 133
+K Q
Sbjct: 120 DKMLKDGGTIHDTQ 133
>gi|328952597|ref|YP_004369931.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
gi|328452921|gb|AEB08750.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
Length = 328
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 93/309 (30%), Gaps = 6/309 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
VG+FV++ L + + + + G + R SV GL+ + V G+ V
Sbjct: 10 EAKVGVFVLAALLLLGYMSLRVGKFSFVTWGEQFPLQARFT-SVSGLAENGRVEIAGVEV 68
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
GRI + L +L L+RP L A IRT+G+ G YIEL + +
Sbjct: 69 GRIKAIHL---SDGRALVDLLLRPGLDLRQDAQARIRTKGMLGEKYIELELGSPDNPALP 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
++ ++ + ++ ++D Q + I T
Sbjct: 126 AGGVI-SRTESAVEFDQLLSKVPALLDDFRPILNDVRAVSQTLQRVIGTTEGETSLKEIL 184
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ A+ K+ + A +L + L
Sbjct: 185 ENFNQASKSLSQVARGLERGEGTLGKLLKDDGLYREVQGVVREVQSAAKNLTAFSDKLAR 244
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ V + + ++ L + K + ++N+
Sbjct: 245 GDGTIAKLVNDKGLYEQANQAITRLNRVAHKIDAAEGTLGKLVNDKSLYDDAKKAVKNVN 304
Query: 306 DSTSNMRSS 314
+ ++
Sbjct: 305 QAMEGIKEQ 313
>gi|309779665|ref|ZP_07674424.1| PqiB family protein [Ralstonia sp. 5_7_47FAA]
gi|308921606|gb|EFP67244.1| PqiB family protein [Ralstonia sp. 5_7_47FAA]
Length = 531
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/450 (8%), Positives = 111/450 (24%), Gaps = 54/450 (12%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIP-----------------GSVDG 51
VG +S L Y + + S+
Sbjct: 113 RVGASGISGLGTLLSGAYIGVDIGHSKDSQTQFVGLESPPSVTTDQQGRQFSLHGDSLGS 172
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + V + + VG++VG LD++ + + + P Y
Sbjct: 173 VDIGAPVFYRHLQVGQVVGFALDKQGGG---VQVKVFVNAP------------------Y 211
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + T S + + +
Sbjct: 212 DKYVGTNTRWWHASGVDLRLDSSGLKLNTQSLATVIVGGL------AFQTPQGQPDGPPP 265
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + ++ + + + + +T +
Sbjct: 266 PDSAVFSLASDESDAMREPDGAPLTVVMRFNQSLRGLSVGAPVDLRGIALGNVTDIGIEY 325
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+++ + S + ++ E Q G + + + +
Sbjct: 326 DEAAKTFSMRVVMALYPSRLSRRSNTSLPAPDTPGGHEMLQHLVMQGLRGQLRMGNLLTG 385
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ-KFA 350
F + + RS + + + + + + D
Sbjct: 386 QLYVALDMFPKAPRATVDVHRSPVELPTVPNSLDELQVQLADIAKKLNQVPFDKIGSNLN 445
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ N + + + A+ + + + T + +D+
Sbjct: 446 GALENANRLFGHLDT-EVVPQARDTLASAQQTFNAAQATLRQ--------DSPLQSDVHE 496
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++L T+ + + ER+P+ +++G+
Sbjct: 497 AMQELTRTLQSLNALTDYLERHPESLLFGK 526
>gi|168041713|ref|XP_001773335.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675377|gb|EDQ61873.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 346
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/277 (10%), Positives = 73/277 (26%), Gaps = 6/277 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLFV+S + ++ W+ + G++ + VR G+ VG +V
Sbjct: 62 VGLFVLSGMLLLTITLVWVKGKQIRAKTRKYEAVFEFQQAQGITVGTPVRIRGVDVGNVV 121
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ E + + + + + GL T I+++ R I +
Sbjct: 122 QVRPSLE-KIDVVVELS-DAGIVVPRNALVEVNQSGLISETLIDVTPRRP----IPKPTV 175
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + E + + + + E +
Sbjct: 176 GPLDPNCRSEGLIVCDRERMKGEQGVSLDELVGICTKIARQIDALGVERMASMAERLIDA 235
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ + + K+ + + DL +A + +
Sbjct: 236 VQDARPLLLKVQSMAGDVEPLLKEVREGSLLKDLENLTKVAAEAGRDLSTLNKIVLTSDN 295
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
S + T+ + ++ V +
Sbjct: 296 MVLLRDSVSTLTKTLQHIENISRDVSGVTGDAKTRNN 332
>gi|163803694|ref|ZP_02197555.1| paraquat-inducible protein B [Vibrio sp. AND4]
gi|159172505|gb|EDP57369.1| paraquat-inducible protein B [Vibrio sp. AND4]
Length = 548
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/413 (8%), Positives = 110/413 (26%), Gaps = 34/413 (8%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTAT 100
I+ L V + G VGR+ D E + +P D+ + T
Sbjct: 161 IVLTHREAGKLGVGDPVIYKGFTVGRVETTSFDVETRRALYQLFIFKPYDSLVRTKTHFW 220
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + ++ +++ + +
Sbjct: 221 LTSGVDLQLSAEGFEVKFGSLESLITGGVTFDTAP----------------GAAAGDPVT 264
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
++ ++ ++ + ++ + + +
Sbjct: 265 EDMLYYRLFDDAKQVREGMYDEYIQFVMMFEESVRGLKRKAPVEYRGLRIGTVMKVPMRM 324
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ ++ + S+ + +R T +T +
Sbjct: 325 PTPEEEFSAKKIPVLVRIELGRVYENLPSNQLPMLKDKLKTEFAKGLRGTLKTGNLLTGA 384
Query: 281 I---DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
+ SD + SK + + T+N++
Sbjct: 385 LYIDTDFYSDEEPYVSSKFEGYDVFPTKQGGFAQVQRQVNDFLTKLNSLPMEDTLNSLNK 444
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
N + + + ++ + ++ ++ +D + ++ + T +
Sbjct: 445 TLKNSEKTLASAERVANSVDRLLNQEDTKAIPEDIRNSLEQLQKTLDGY----------- 493
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ + N++++ +++L++ + F L P +V+G + VK P
Sbjct: 494 -GPNSTMYNEMESTLKELEQVMTEFKPVLKQLNEKPNSLVFGED--EVKDPTP 543
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ ++ SV GL + V + G+ +G ++ +
Sbjct: 286 EYIQFVMMFEESVRGLKRKAPVEYRGLRIGTVMKV 320
>gi|118463921|ref|YP_883677.1| mce-family protein mce2f [Mycobacterium avium 104]
gi|118165208|gb|ABK66105.1| mce-family protein mce2f [Mycobacterium avium 104]
Length = 508
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 78/255 (30%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + +P S GL ++V + GI +G++ G+ + A
Sbjct: 23 YYLRIPSLAGIGRYTLYAELPQS-GGLYRTANVTYRGITIGKVTGVEP---TERGARATM 78
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + A + + G Y++L + + + T P+
Sbjct: 79 SIEDGYRIPADAAAHVHSVSAVGEQYVDLVSTAGREPYLVDGQTIHKSTVPSQIGPALDA 138
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A KI+ + + + L + + I+ +I H+D ++ +
Sbjct: 139 ANRGLAVLPRDKIASLLYETSQAVGGLGPSLRRLVDATQAIAHDFRGSIDHVDDIVERSA 198
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + A + IL N ++ + V ++
Sbjct: 199 PIIDSQADSADTLGRWAANLNTLAAQTARQDPALRSILANAAPTAEQVRATFGGVRESLP 258
Query: 266 DVRETTQTFQEVGQK 280
+ ++ ++
Sbjct: 259 QTLANLEVVIDMLKR 273
>gi|319950495|ref|ZP_08024408.1| Mce family protein Mce4C [Dietzia cinnamea P4]
gi|319435854|gb|EFV91061.1| Mce family protein Mce4C [Dietzia cinnamea P4]
Length = 340
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 90/295 (30%), Gaps = 10/295 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E + +VG V ++ + L G + GL+ S VR
Sbjct: 8 EPRFSNATVGAIGVLVILALTAVSFRLDAL-PIVGAGPKYTAYFSE-AAGLAGGSEVRVA 65
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG + + L+ + + D L T A+I+ + + G Y+ L+ +
Sbjct: 66 GVKVGVVTDVALEGD---KVAVGFRAK-DAWLGDDTRASIQLKTVLGQKYLALTPAGTGE 121
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ A + + + E K+++S + ++ + +
Sbjct: 122 LETAEPIPLERTVAPYDVVTAFSSAAETLGEIDDAKLAESLVTLTDTMQASPEEFRGAVD 181
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHS----SDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ +S +++ + + +++ T+ + +D T +
Sbjct: 182 GMARLSQTVSSRDAELRRLLEATRTSSQIVADRNDDFRRLIIGTGQLLGELNERAESLKL 241
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ ++ + T+ + + +++ + +
Sbjct: 242 VLASTRGLSIELRRFVAENEAEFKPTLDSLDSALAVLTDHEEELRASIHNLGPFY 296
>gi|251773081|gb|EES53635.1| Mammalian cell entry related domain protein [Leptospirillum
ferrodiazotrophum]
Length = 177
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 49/140 (35%), Gaps = 8/140 (5%)
Query: 1 MESKNY----YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+ VGL V I + + ++ +V GL+ +
Sbjct: 3 MKRSTNLPLSEFRVGLIVGGSFLVGAMVIIAYGKISGIFSRQVDMTALF-RNVQGLTQGA 61
Query: 57 SVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIE 113
VR GI G + G+ + + + + + L T+A I TQGL G+ Y+E
Sbjct: 62 PVRLMGIDSGYVSGVEFVRFQGKRYVKVSMRLSRERFRELSAGTSAEIHTQGLMGVKYVE 121
Query: 114 LSTLRKEKKTIFQIATERNQ 133
LS R + +
Sbjct: 122 LSPGRSSDGPLNASLPIMGK 141
>gi|123965557|ref|YP_001010638.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9515]
gi|123199923|gb|ABM71531.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9515]
Length = 281
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 83/283 (29%), Gaps = 6/283 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG ++ + F +WL + + GLS S V +
Sbjct: 1 MRRSLRDSIVGFSLLGGILIFTFFSFWLRGVKLSSKNWY--LFAEFNNASGLSKKSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI--TYIELSTLR 118
GI VG I + L + P+ L A + T G ++ +
Sbjct: 59 RGILVGSIEDI-LFTNESIKAKIVLN-NPEIILPKPAFAKVVTNSFLGGDVQVSLETSQK 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
K I + +E +I I ++ + + IE + +
Sbjct: 117 TIPKDIAKAISEECDSELIVCQGDTITGKQLSSLSNITNRINQILKESNQENLIENVVNS 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+T + +++ + + + N+I I + D +
Sbjct: 177 IDQFDKTQENLDELIYLSKQEILRVKPLIKEVTVAAGHLNSILSAIDNEDTLKDIKLTIN 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + ++ + + +R+ T + +I
Sbjct: 237 AAESISGKLDNMSDDFEGLMKDKELTKSLRDLTIGLSKFLNEI 279
>gi|262201125|ref|YP_003272333.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262084472|gb|ACY20440.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 379
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 89/299 (29%), Gaps = 7/299 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ S+G + ++ S ++L G A + GL + VR G+
Sbjct: 39 RRSPVSIGAIGLLVVVMLAVSSFYLQSL-PLVGAGARYTAKFTE-AAGLKPGNEVRVAGV 96
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + G+ L+ + + +T L T A+I+ + + G ++ L+ E
Sbjct: 97 KVGEVDGVKLNGD---RVDVSFRV-TNTWLGNQTQASIQIKTILGQKFLSLTPRGSEPAD 152
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ T+ + S + + + + + + T ++
Sbjct: 153 PDEPFTDTVAPYDVVEAFSD-AAKQLTGDPNGGNPGIDTTQVATSLRVLSDAFSGTAGDM 211
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+A I Q ++ + + L ++N
Sbjct: 212 GPALNGIARLSQTIASRDQEVQKLLLATKDTSQILADRNETFVRLIAGAGQLLDELNNRQ 271
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+I + + V D + + + ++ LL + ++ T
Sbjct: 272 RSISALLASTTSLGASLTGIVRDNEQQIGPALDALKGVNDLLKRQNDNLRQTITYMAPF 330
>gi|308189079|ref|YP_003933210.1| ABC transport system, periplasmic solute-binding protein yrbD
precursor [Pantoea vagans C9-1]
gi|308059589|gb|ADO11761.1| Putative ABC transport system, periplasmic solute-binding protein
yrbD precursor [Pantoea vagans C9-1]
Length = 181
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 1/120 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG+F++ L + F ++ + ++ GL S V+
Sbjct: 1 MQSKKSEIWVGIFMIMALLAALFLALRVADLKSMGTEPTWKLYATFDNIGGLKASSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + L+ + + + + +++ +RTQGL G ++ L+
Sbjct: 61 GGVVIGRVTDIELEPKTLLPRVTMEISDQYANKISDTSSLAVRTQGLLGEQFLALNLGFD 120
>gi|183984954|ref|YP_001853245.1| MCE-family protein Mce4B [Mycobacterium marinum M]
gi|183178280|gb|ACC43390.1| MCE-family protein Mce4B [Mycobacterium marinum M]
Length = 350
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 77/259 (29%), Gaps = 3/259 (1%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ V + L VR G+PVG + + L+ + I
Sbjct: 34 FGDFRFGPTNVYHATFTNASRLKAGQKVRIAGVPVGSVKAVDLNPDNT--IDVAFAIDRA 91
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+Y ST A IR + L G Y+E+++ E + + T + + +
Sbjct: 92 YTMYSSTRAVIRYENLVGDRYLEITSGPGELRKLPPGGTINAEHTQPALDLDALLGGLRP 151
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ +IE ++ + S + T
Sbjct: 152 VLKGL-DADKVNTVTGAVIELLQGQGGALANVLADTSAFSTALARRDQLIGDTITNLNSV 210
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + + + + + + I I ++ ++ + N+ ++
Sbjct: 211 LATVDQRSAQFSASVDQLQQLITGLAENKDVIAGAIPPLASTTTDLTELLKNSRRPLQGL 270
Query: 271 TQTFQEVGQKIDHLLSDFS 289
+ + + ++D+ + +
Sbjct: 271 LENARPLATELDNRKDEVN 289
>gi|291298698|ref|YP_003509976.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
gi|290567918|gb|ADD40883.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
Length = 432
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 51/133 (38%), Gaps = 9/133 (6%)
Query: 1 MESKNYYTSVGLFVVSILF-FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ +G+F + L +F + +L + V + + G ++V
Sbjct: 1 MISRKLRLQIGVFALISLLGIAFVGVRYLG----WFDSSYVVYVDAKET-GGAYEHAAVA 55
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+P+GR+ + L + + + I +T + A + + G Y++L
Sbjct: 56 YRGVPIGRVGEVKLHGKG---ARMELRIDSETKVPKDVKAVVAQRSAVGEQYVDLRPNTA 112
Query: 120 EKKTIFQIATERN 132
E + + +
Sbjct: 113 EGPYLGEGDVVDD 125
>gi|120405551|ref|YP_955380.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958369|gb|ABM15374.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 499
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 16/133 (12%), Positives = 43/133 (32%), Gaps = 6/133 (4%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + +F V ++ ++ V + +P + GL +V
Sbjct: 1 MRLTRQILIQMAIFAVIATTALVIMVFAYMRLPAFLGIGQYRVTLELPET-GGLYPRGNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VG + + L A + + + + A + + G +++L
Sbjct: 60 TYRGVEVGEVKSVQL---TDTGVEAVLSLNDNVEIPANLEAEVHSVSSVGEQFVQLLPRS 116
Query: 119 KEKKTIFQIATER 131
+ +
Sbjct: 117 ADGPVLKDGDVIP 129
>gi|114047608|ref|YP_738158.1| hypothetical protein Shewmr7_2113 [Shewanella sp. MR-7]
gi|113889050|gb|ABI43101.1| Mammalian cell entry related domain protein [Shewanella sp. MR-7]
Length = 554
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/398 (9%), Positives = 103/398 (25%), Gaps = 25/398 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP--DTPLYPSTTATIRTQGL 106
LS V + G VGR+ + E + + I D + ++ + +
Sbjct: 172 AGKLSVGDPVLYEGFRVGRVENTGFNTER-REAFYQLFINKPYDELVRDNSQFWLTSGIN 230
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
++ L+ +T+ +G +E + +R
Sbjct: 231 MQLSAKGLNLQVGSLETLLTGGVSFG---FPEGRLAGAKMTEDGSEFRLYDSQELARESM 287
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
L + I +++ + F+ T +
Sbjct: 288 YDKYLEFVMLFDESIRGLHDGASVEFRGITIGEVLKSPLTLQQLDPHFGRFSHGTIPVLV 347
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + + + + + T + + + L S
Sbjct: 348 KIDLARVFEHAEQVGLDNLRTEIERELQSGLRASLKTGNLLTGALFIDLD-------LYS 400
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
D + + + + T + N +
Sbjct: 401 DAKPYQNANFMGYPIFPTKRAGVAEIQKQVGQLITKLNNLPLEKTFTEVNATLQNTASAL 460
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+++++ + ++ + +E SL D Q+ + T ++ S
Sbjct: 461 SQWSKVGASLDQVLQQQEVLSLPADMQQTLQTVSSVAKGYGPE------------SSVYV 508
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++Q +++LQ + + P ++ G + +
Sbjct: 509 ELQTSLQQLQTLMKELAPLSRQLNQKPNALILGTDLPA 546
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
E ++ S+ GL +SV F GI +G +
Sbjct: 290 KYLEFVMLFDESIRGLHDGASVEFRGITIGEV 321
>gi|124025082|ref|YP_001014198.1| putative ABC transporter [Prochlorococcus marinus str. NATL1A]
gi|123960150|gb|ABM74933.1| possible ABC transporter [Prochlorococcus marinus str. NATL1A]
Length = 281
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 34/110 (30%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG ++ L ++ WL + E+ GL+ S V +
Sbjct: 1 MRRSLRDAFVGFSLLGGLVIFSGAMLWLRDF-RLGSKTWEISASFKD-ASGLAKMSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGI 109
GI VG + + K + D L A I T + G
Sbjct: 59 RGIIVGSVQKISFTPNT---VETKIKLNNDNLILPKPVIAKIVTSSMLGG 105
>gi|126436740|ref|YP_001072431.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236540|gb|ABN99940.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 444
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/289 (11%), Positives = 87/289 (30%), Gaps = 16/289 (5%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M++ + +G ++ + + + S G+ + V
Sbjct: 1 MKTFSERSPIVIGAIGCALTAGMVVAALNYDKL-PFFDDSKGYSAYFAES-GGIIAGAPV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ +G VG + + LD L K + L T A I+T+ L G +E+
Sbjct: 59 QVSGFRVGEVTSVELDGP---RVLIKFGVDKGVRLGDRTEAAIKTKTLLGAKILEV---S 112
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ A ++ P + + ++ + + + +
Sbjct: 113 PRGDGEQREAIPMDRTRPPYQLPDALGDLTTTI------SGLNTDQLSESLAVLADTFHD 166
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T +++ +A ++K + +++ L +
Sbjct: 167 TPPDVKVAVQGVARFADTLNKRDEHLRNLLSNANKATAVLAQRSDQVVSLIADTNALLLE 226
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + S N + Q+ + + RET + + ++ ++ +
Sbjct: 227 LQGQSAALDQISGNISAVTQQLKGFIGENRETLKPAIDKLNEVLAVVDN 275
>gi|118619251|ref|YP_907583.1| MCE-family protein Mce4B [Mycobacterium ulcerans Agy99]
gi|118571361|gb|ABL06112.1| MCE-family protein Mce4B [Mycobacterium ulcerans Agy99]
Length = 350
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 77/259 (29%), Gaps = 3/259 (1%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ V + L VR G+PVG + + L+ + I
Sbjct: 34 FGDFRFGPTNVYHATFTNASRLKAGQKVRIAGVPVGSVKAVDLNPDNT--IDVAFAIDRA 91
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+Y ST A IR + L G Y+E+++ E + + T + + +
Sbjct: 92 YTMYSSTRAVIRYENLVGDRYLEITSGPDELRKLPPGGTINAEHTQPALDLDALLGGLRP 151
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ +IE ++ + S + T
Sbjct: 152 VLKGL-DADKVNTVTGAVIELLQGQGGALANVLADTSAFSTALARRDQLIGDTITNLNSV 210
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + + + + + + I I ++ ++ + N+ ++
Sbjct: 211 LATVDQRSAQFSASVDQLQQLITGLAENKDVIAGAIPPLASTTTDLTELLKNSRRPLQGL 270
Query: 271 TQTFQEVGQKIDHLLSDFS 289
+ + + ++D+ + +
Sbjct: 271 LENARPLATELDNRKDEVN 289
>gi|302347124|ref|YP_003815422.1| hypothetical protein HMPREF0659_A7408 [Prevotella melaninogenica
ATCC 25845]
gi|302150915|gb|ADK97176.1| conserved hypothetical protein [Prevotella melaninogenica ATCC
25845]
Length = 326
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 3/104 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+ + + + FF I +L + A I+ + GLST + V G VG
Sbjct: 9 VRIAIVAILAIVVLFFGIQFLRGIS-LFSNDAHYKIKF-NDITGLSTSTPVYARGFKVGI 66
Query: 68 IVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + D + + + TTA I + + +
Sbjct: 67 VRNIDYDYDKLGESITVDIDVEKTLRIPEGTTAEIVSDIMGNVK 110
>gi|226361931|ref|YP_002779709.1| Mce family protein [Rhodococcus opacus B4]
gi|226240416|dbj|BAH50764.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 477
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/328 (7%), Positives = 87/328 (26%), Gaps = 10/328 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ + +F + + ++ + + +P S GL ++V +
Sbjct: 4 TRFVRIQLTIFSILTVVALTVMGLHYMRLPALAGIGQYTLTVDLPTS-GGLYGTANVTYR 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G +G + + + A + T + A + ++ G Y++L +
Sbjct: 63 GATIGTVTDVVPTASG---ARATLRVDSSTKIPADARAEVHSRSAIGEQYVDLVPSGIDG 119
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ R + + + ++ + + +I+ T
Sbjct: 120 PYLQDGDVIPVDRTSVPQDIAPMFDTVNKGLE-----AIPEDKLATLIDESYNAFNGTGE 174
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+I+ + + + T + + +
Sbjct: 175 DIQRLLESSSAVAATAADTADPTSRLIEDAAPFLRSQVDSGPALQEWVRHLREVSAQAAG 234
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
++ +S ++ +R TT ++ + ++ ++
Sbjct: 235 RDAQVRSIFQTAPAASTELTELFRRLRPTTPILLANLTRLGQVAVTYNRSLEQALVLVPP 294
Query: 302 ENIADSTSNMRSSISAIREITDQRQKII 329
T + + S + D +
Sbjct: 295 SVGLMKTMTVPNEDSTGAALMDFNLNLN 322
>gi|162147576|ref|YP_001602037.1| putative toluene tolerance protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209542209|ref|YP_002274438.1| Mammalian cell entry related domain-containing protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|161786153|emb|CAP55735.1| putative toluene tolerance protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|209529886|gb|ACI49823.1| Mammalian cell entry related domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 155
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 44/129 (34%), Gaps = 3/129 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +++ + +L F Y + + R S +GL + V+ G+
Sbjct: 3 RENGSAIVFSGLVLLVAGAFYAYARASQVDLGNDRYALSARFI-SANGLHVGAEVQLAGV 61
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVGR+ + LD + + D L + I + + G + + +
Sbjct: 62 PVGRVTAIALDP-ATAMANVGFTLDRDLSLPADSGVMIGSATMTGDDALMVVPGKA-PAR 119
Query: 124 IFQIATERN 132
+ A N
Sbjct: 120 LPPGAVITN 128
>gi|74316996|ref|YP_314736.1| ABC-type transport system periplasmic component [Thiobacillus
denitrificans ATCC 25259]
gi|74056491|gb|AAZ96931.1| ABC-type transport system periplasmic component [Thiobacillus
denitrificans ATCC 25259]
Length = 308
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/293 (14%), Positives = 88/293 (30%), Gaps = 9/293 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ VGLF + LF + + +L + + + E+ + S DG++ V F+GI +G
Sbjct: 5 HFKVGLFAATSLFLAAVFVVYLLHARGFFEDIFELRLA-AASADGVAPGVPVVFSGIEIG 63
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
R+ L L+ + A+ L R L ++T T+ + G S
Sbjct: 64 RVSTLGLNDDGGIVIRAEFLERNAKWLRETSTFTLDKPLVGGAKIRVDSPDLDAPTLADG 123
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN---- 182
+ P+ + + N + + T
Sbjct: 124 STVLLLSSDVSKEIPALVERVKAILANVEHLTRKDGEVNATLANVEKLTGRMTGEYGMLE 183
Query: 183 ----IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + +++ ++ +D T + L
Sbjct: 184 GLLGSAEKARAVTDSLDKTRALITKLDGIALKTDRWLFAPDGVAEETRASLAQVRLMLND 243
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
L+ N V S V D+ + +K + L+++ + K
Sbjct: 244 AQASLKKADAVMANAVDISADVKQGTQDIAALRSEIDDAVRKANALVNEINKK 296
>gi|88803693|ref|ZP_01119217.1| hypothetical protein PI23P_00335 [Polaribacter irgensii 23-P]
gi|88780426|gb|EAR11607.1| hypothetical protein PI23P_00335 [Polaribacter irgensii 23-P]
Length = 315
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 83/291 (28%), Gaps = 8/291 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ +G+ V I+ + +L N + ++ + GLS S V NG+
Sbjct: 2 SKELKLGIITVGIIVLFVWGFNFLKGENLFASGSRVFLVEYAK-IGGLSKASPVTINGLK 60
Query: 65 VGRIVGLFLDQ--EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT----YIELSTLR 118
VG++ + D E + + + + I + +
Sbjct: 61 VGKVDKIEFDTSIERRGSLIVTFTVENEFEFSRKSIVKIYSPNPLSGSSLAIIPNYEGET 120
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ E + I + + I + + S + E +
Sbjct: 121 AVSGDLLYGEMEESLFTSIGERLNPLQQKIERVIVRTDTLFSSINRVLNENSVNEINRSI 180
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + + +T ++K ++ + S+ + + K
Sbjct: 181 ANLSGAISDIRQTIQAVNTMISDNQENLTSTIKNTKKITENLSKVSDSISAIDFGEMVAK 240
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + N S + ++D R + ++++ LL D
Sbjct: 241 AEEAVGNFNQMSRKINDGGGTIGKLLNDER-MYDNLEAATKELEELLRDIK 290
>gi|134103290|ref|YP_001108951.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|291004491|ref|ZP_06562464.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915913|emb|CAM06026.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 341
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/109 (22%), Positives = 39/109 (35%), Gaps = 4/109 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V V ++ I L+ +N R V L+ VR G+ VG +
Sbjct: 10 LVKFLVFVLVTVLATGILVLTIANNDLRSAETYTARFTD-VTALNEGDEVRIAGVKVGEV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + + + + D L S TAT++ + L G YI L
Sbjct: 69 QDIAVV--DRRVAEVRFTV-TDRRLPESVTATVKYRNLVGQRYISLEQG 114
>gi|239982866|ref|ZP_04705390.1| secreted protein [Streptomyces albus J1074]
gi|291454709|ref|ZP_06594099.1| secreted protein [Streptomyces albus J1074]
gi|291357658|gb|EFE84560.1| secreted protein [Streptomyces albus J1074]
Length = 424
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 49/139 (35%), Gaps = 7/139 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F++ + F + ++ G V +++P + GL T S V
Sbjct: 1 MITLAVRLKNLAFLIIAVLVLSFLGIRYADLGRFAGVADHYTVTVQLPRT-GGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + A+ I+ P + T A + + G YI+L
Sbjct: 60 TYRGVSVGRVGPIGLTGDG---VSAELRIKKSAPRIPADTEAVVASLSAVGEQYIDLRPA 116
Query: 118 RKEKKTIFQIATERNQRAM 136
+ A
Sbjct: 117 SDGGPYLADGARIEQADTQ 135
>gi|239787372|emb|CAX83848.1| ABC-type transport system subunit [uncultured bacterium]
Length = 317
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/298 (12%), Positives = 91/298 (30%), Gaps = 10/298 (3%)
Query: 1 MES-KNYYTSVGLFVVSILFFSF-FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M + Y +VG FV++ R+ D +V G+ + V
Sbjct: 1 MRTLDTNYVAVGAFVLAGAAGLITALALLTGRTGSADMYYTGY-----DNVSGIKYGTVV 55
Query: 59 RFNGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ G VG++ + E ++ + + A I + GL I+L
Sbjct: 56 SYEGYRVGQVEWVKPYGEKGKPRFKVALAVQEGWEIPEDSVAAITSSGLLAAVSIDLRAG 115
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
R E + + + + A S + + + + + ++ + L
Sbjct: 116 RSETLAKPEAVLQGASSSNMMAMVSSLAGDMGDLTQ--NGLKPLLASLLHYVDTLGSTLE 173
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T ++ L+ ++S + + S+ ++D + +
Sbjct: 174 KTAPDLLANMQTLSKDLSKRGPAILENAESLSGRLSQAGERVLSDKNIDEMDKTVKMMGE 233
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + + + + + T + V ID + + S ++
Sbjct: 234 LKATKAQVDHLIAQLNATADNAKPSVAQGLTDLNHTLRVVSSSIDSITVNMESTSRNM 291
>gi|226305219|ref|YP_002765177.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226184334|dbj|BAH32438.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 415
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 5/124 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG VV++L + ++ N V + S G+ T++ V + G+PVGR+
Sbjct: 10 LVGFVVVALLGLIYVGAKYVRLDNLMGFGQYTVKTELATS-GGIFTNAEVTYRGVPVGRV 68
Query: 69 VGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L + I P + S A + + G Y++L + +
Sbjct: 69 GDMSLTDDG---IQVDLKIDNSAPEIPASARAVVANRSAIGEQYVDLQPDTDQGPFLADG 125
Query: 128 ATER 131
+
Sbjct: 126 SVIA 129
>gi|223940416|ref|ZP_03632269.1| Mammalian cell entry related domain protein [bacterium Ellin514]
gi|223890911|gb|EEF57419.1| Mammalian cell entry related domain protein [bacterium Ellin514]
Length = 329
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/119 (18%), Positives = 40/119 (33%), Gaps = 2/119 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG FV+ L + + P ++++ G+ GL T S+V
Sbjct: 1 MSQARKEIKVGFFVLICLSLLGLLLLQFGKGTSLFRPTYTILLK-SGNAGGLKTRSTVLM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG I + L+ + I ++ I G G ++ +
Sbjct: 60 AGVGVGTISRIQLNPDGKG-VTIYLKIYKQYEIHKDARIVIEQSGFLGDPFVAIYPGDN 117
>gi|254823475|ref|ZP_05228476.1| mce-family protein mce1c [Mycobacterium intracellulare ATCC 13950]
Length = 520
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/318 (11%), Positives = 90/318 (28%), Gaps = 6/318 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S G++T VR G+ V
Sbjct: 8 NRVRIGLMGIVVTVLVIGVGQSFTSVPMLFAKPSYYG-QFTDS-GGINTGDKVRIAGLDV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ G+ +D + H K I +T + + I+T + G +++ +
Sbjct: 66 GKVEGIKIDGD---HIRLKFSIGTNT-IGTESRLAIKTDTILGKKILDVEARGNQPLRPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + S + + I+ L+ + +
Sbjct: 122 ASLPLGQSTTPYQIYDAFFDVTKAAQGWDIDTVKQSLHVLSQTIDQTYPHLSPALEGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + + ++ ++ + Q +N +L N
Sbjct: 182 FSDTIGKRDEEVKHLLAQANQVAGVLGDRSDQIDRALVNAKTLLAAFNERGQAINALLAN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
I S D N H + + + Q+ D L + + K +
Sbjct: 242 IAAFSEQVKGLLDDNPNINHVLEQLRTLSDILVQRKDDLANGLTEVGKFLPSLNEAIASG 301
Query: 306 DSTSNMRSSISAIREITD 323
+ +++ +
Sbjct: 302 PFFKVVLHNLALYQISQP 319
>gi|326335009|ref|ZP_08201209.1| secreted MCE family protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692814|gb|EGD34753.1| secreted MCE family protein [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 326
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/337 (7%), Positives = 92/337 (27%), Gaps = 14/337 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + ++ + F +L + + S GL T ++V NG+
Sbjct: 4 SKEAKTAIIILLGVASFIFGYNFLKSTPLFSTDR-NYHAVFTHS-GGLQTGTNVTVNGVS 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + + +D + + D ++ A I + L + +
Sbjct: 62 VGAVKDIKIDP-RTAKIVVSFSCKKDFTFSKNSKAEIYSSLL----------GNTGLQIL 110
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + T S + + + + + ++++ + T+
Sbjct: 111 PALDGATPAQPGDTIPSSIQASLMDAIGANLEPTAKNLNKVLNSVDSLMITFSHTLDAKA 170
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ ++ ++ ++ + +T++ + + +
Sbjct: 171 QKDIKESLANLNVTLQNMNKASVSLNNILASSGVPLQKSLTNVHTISENFVHLSDSLSKI 230
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + + +V + + + T ++ L ++ + +
Sbjct: 231 QVGKLVAHLEGTLSEVNGLLQQIEKGNGTISKLLND-PKLYNNLQTATSELGLLMEDIRL 289
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
S + + Q + +I+
Sbjct: 290 NPKRYVHISVFGKKNQAYETPQTVEPSISERAEKNQK 326
>gi|288802025|ref|ZP_06407466.1| mce related protein [Prevotella melaninogenica D18]
gi|288335460|gb|EFC73894.1| mce related protein [Prevotella melaninogenica D18]
Length = 326
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/321 (11%), Positives = 84/321 (26%), Gaps = 17/321 (5%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+ + + + FF I +L + A I+ + GLST + V G VG
Sbjct: 9 VRIAIVAILAIVVLFFGIQFLRGIS-LFSNDAHYKIKF-NDITGLSTSTPVYARGFKVGI 66
Query: 68 IVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + D + + + TTA I + + G + L + K
Sbjct: 67 VRNIDYDYDKLGESITVDVDVEKTLRIPEGTTAEIVSD-IMGNVKVVLQFGKSTKFLEPN 125
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + + + K+ + T
Sbjct: 126 GWIDGG-------------INDGTLGDLKSMVPSIQKMLPKLDSILGSVNTLLADPALQS 172
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S + I+ T + + + +D +
Sbjct: 173 SVHNVDKITANLTTSTRELNTLLAQVNGSLPVMTAKAGRVMDNANGMMVNANKGITEARG 232
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ N + S+ DV T ++ L + +S + ++
Sbjct: 233 AIRGANTMMSNLNNKVNGLDVEATMAKVNATLDNMNSLTAKLNSNEGTMGLMLNDASLYK 292
Query: 307 STSNMRSSISAIREITDQRQK 327
+ ++ S ++ K
Sbjct: 293 NLNSTMRSADSLLTNLKAHPK 313
>gi|54022509|ref|YP_116751.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014017|dbj|BAD55387.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 473
Score = 74.6 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 50/137 (36%), Gaps = 7/137 (5%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ ++ + +F V + ++ + EV + + + GL ++V
Sbjct: 1 MKLTRFVRIQLAIFAVLTVVGLTVMAGTYVQLPAMFGIGRYEVTVELAAT-GGLYEHANV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTL 117
+ G VGR+ + L + AK I + A +R+ G Y++ +
Sbjct: 60 AYRGTNVGRVQEVRLTPDG---VAAKLSIDSSQKIPADVDAWVRSVSAIGEQYVDLIPPE 116
Query: 118 RKEKKTIFQIATERNQR 134
+ + + A +R
Sbjct: 117 QPGRGNLADGAVIPVER 133
>gi|296114405|ref|ZP_06833059.1| Mammalian cell entry related domain protein [Gluconacetobacter
hansenii ATCC 23769]
gi|295979166|gb|EFG85890.1| Mammalian cell entry related domain protein [Gluconacetobacter
hansenii ATCC 23769]
Length = 322
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/310 (12%), Positives = 100/310 (32%), Gaps = 13/310 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T+VG FV+ ++ + + + ++ G+++GL + V
Sbjct: 1 MAER--QTTVGAFVLGGALLGVAAVVLFGKFHPF-SATNNAVVIFDGAINGLGIGAPVTL 57
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG + + + + + + +R D T +T +QGL +L
Sbjct: 58 EGVQVGAVEKIGIKFDPASHKAYIPVTIQLRAD-----RTKSTEHSQGLTAEGLPDLIQH 112
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ Q + ++ P+ + ++ S + PL
Sbjct: 113 GLRAELHMQSFVTGQEEIDLSFDPATPARLHPGMSDLTEIPVRESEMQKLTDTLTTLPLK 172
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T N + + + + +DK + ++ + D T + +
Sbjct: 173 TIATNADEMLVSIRSLAERLDKDLPPLV--TSVKETSDRSRVTVDTATDTIRDLDKRLDV 230
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++ I + ++ + + + T ++ + + + S+ + ++
Sbjct: 231 TLSSIDRLANSGTQQLDSRGAELHDLLINSNNTVTEARQTLAGLHDITAPSSADRANLDS 290
Query: 298 SAFLENIADS 307
S A S
Sbjct: 291 SLRDLAAAAS 300
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNI--SALKENNSLFKDAQRAMHTFRDTSEKI 386
+ T++ T + D ++ +S I+ + S ++ +S + + +T +
Sbjct: 208 DRSRVTVDTATDTIRDLDKRLDVTLSSIDRLANSGTQQLDSRGAELHDLLINSNNTVTEA 267
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + + + + S + ++ + +R L + + ERNPQ ++ GR
Sbjct: 268 RQTLAGLHD-ITAPSSADRANLDSSLRDLAAAASALRGFATDVERNPQLLLMGR 320
>gi|41410187|ref|NP_963023.1| hypothetical protein MAP4089 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41399021|gb|AAS06639.1| hypothetical protein MAP_4089 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 512
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 78/255 (30%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + +P S GL ++V + GI +G++ G+ + A
Sbjct: 27 YYLRIPSLAGIGRYTLYAELPQS-GGLYRTANVTYRGITIGKVTGVEP---TERGARATM 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + A + + G Y++L + + + T P+
Sbjct: 83 SIEDGYRIPADAAAHVHSVSAVGEQYVDLVSTAGREPYLADGQTIHKSTVPSQIGPALDA 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A KI+ + + + L + + I+ +I +D ++ +
Sbjct: 143 ANRGLAVLPRDKIASLLYETSQAVGGLGPSLRRLVDATQAIAHDFRGSIDDVDDIVERSA 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + A + IL N ++ + V ++
Sbjct: 203 PIIDSQADSADTLGRWAANLNTLAAQTARQDPALRSILTNAAPTAEQVRATFGGVRESLP 262
Query: 266 DVRETTQTFQEVGQK 280
+ + ++ ++
Sbjct: 263 QTLASLEVVIDMLKR 277
>gi|23013310|ref|ZP_00053220.1| COG1463: ABC-type transport system involved in resistance to
organic solvents, periplasmic component
[Magnetospirillum magnetotacticum MS-1]
Length = 163
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T G V+ + + + + G + R DG++ S+VR +G VGR
Sbjct: 9 TVTGGAVMLVGALLLILAFAVGGKSAESGDGYVLKARFNR-ADGINVGSNVRLSGTNVGR 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+V LD+ ++ +R D L T A I T GL G +IEL E+
Sbjct: 68 VVDQSLDE--RYRAVLTLRLRNDISLTSDTAAVIYTDGLLGAKFIELKPGGDEQM 120
>gi|145222150|ref|YP_001132828.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145214636|gb|ABP44040.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 352
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+F ++++ + S + G++ + V +GI
Sbjct: 7 SNPLRTGIFGIALVACLVLVSFGYSSL-PFFPQGKAYEAYF-ADAGGITPGNDVNVSGIN 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VG++ + L + + + + + + I+T + G
Sbjct: 65 VGKVNSVELAGD---AAKITFTVNREVKVGDQSLVAIKTDTVLGEK 107
>gi|296533184|ref|ZP_06895811.1| paraquat-inducible protein B [Roseomonas cervicalis ATCC 49957]
gi|296266492|gb|EFH12490.1| paraquat-inducible protein B [Roseomonas cervicalis ATCC 49957]
Length = 556
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/394 (9%), Positives = 103/394 (26%), Gaps = 17/394 (4%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ---EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
+S S V F +PVG + L D + P + D L + +
Sbjct: 173 ISQGSPVFFRDVPVGEV--LGYDPPALDGPTNLRVFIRAPYDGYLRAGSRFWNSSGANLS 230
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+ + + +F + P+ ++ ++ +
Sbjct: 231 FGGDGVKLEIESVQALFAGGIAFDTPRDEHDKPAAPPDTTYFLFESADAARAATSPDRLE 290
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ ++ + S + + + + +
Sbjct: 291 FLVYLEGSVRGLSPGAPVELRGIRIGSVTRVELTYDRESERFRVPVRIAIEPSRIAFPAG 350
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + + + + ++ ++S + + ET +++ +
Sbjct: 351 RPPLEVMAMAQHLVDQGMRF----TLRSGNLLTGQKVLSAETVPDAPPAQVRVEGDMIVL 406
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
S + A ++ + + + L S +
Sbjct: 407 PSAGGDGDDIM-----AAVSAVAGKLERFPLDEIGRNLNGALAAVNGVASSPALQQSLEN 461
Query: 349 FAELMSKINNISALKEN--NSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
A ++ + + + L + + T I SI SQ
Sbjct: 462 LAGALAGVQELVRKADGGITPLLRRLPEIANNLDQTVRSARSAIASIERGYGGDSQVN-R 520
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
I +++L +T + ER+P+ ++ GR
Sbjct: 521 QIDRTLQQLSDTARSIRLLADFLERHPEALIRGR 554
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/253 (9%), Positives = 65/253 (25%), Gaps = 8/253 (3%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN---HSLAKALIRPDTPLYPS 96
E ++ + GSV GLS + V GI +G + + L + + + I
Sbjct: 290 EFLVYLEGSVRGLSPGAPVELRGIRIGSVTRVELTYDRESERFRVPVRIAIE-----PSR 344
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
L + + + + T+ Q+ + T E
Sbjct: 345 IAFPAGRPPLEVMAMAQHLVDQGMRFTLRSGNLLTGQKVLSAETVPDAPPAQVRVEGDMI 404
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + I+ + N + ++ S ++
Sbjct: 405 VLPSAGGDGDDIMAAVSAVAGKLERFPLDEIGRNLNGALAAVNGVASSPALQQSLENLAG 464
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ L+++ +I N+ + + + + + +
Sbjct: 465 ALAGVQELVRKADGGITPLLRRLPEIANNLDQTVRSARSAIASIERGYGGDSQVNRQIDR 524
Query: 277 VGQKIDHLLSDFS 289
Q++
Sbjct: 525 TLQQLSDTARSIR 537
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 45/437 (10%), Positives = 101/437 (23%), Gaps = 42/437 (9%)
Query: 36 GPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPL 93
++ S DGLS + VR+ + VG + + L E + L
Sbjct: 41 SARGPLVTLRFASADGLSAGQTQVRYKSVTVGTVEAIRLTGELDGVDVAVRMSRDIADRL 100
Query: 94 YPSTTATI-----------RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP- 141
+ + + YIE +E + + + + P
Sbjct: 101 TEPARFWVVRPRLSAGNLSGIETIVSGAYIEFDPGPREAERRDEFRGLDDPPGVRAGEPG 160
Query: 142 ----------------SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
S + + + + I P +
Sbjct: 161 RVVTLRAPRLGAISQGSPVFFRDVPVGEVLGYDPPALDGPTNLRVFIRAPYDGYLRAGSR 220
Query: 186 ISTVLANNISH----IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
N+S + + + Q + +T D + +
Sbjct: 221 FWNSSGANLSFGGDGVKLEIESVQALFAGGIAFDTPRDEHDKPAAPPDTTYFLFESADAA 280
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
V V + + L D S+ +
Sbjct: 281 RAATSPDRLEFLVYLEGSVRGLSPGAPVELRGIRIGSVTRVELTYDRESERFRVPVRIAI 340
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF--AELMSKINNI 359
E + R + + + + N+ + S + +++
Sbjct: 341 EPSRIAFPAGRPPLEVMAMAQHLVDQGMRFTLRSGNLLTGQKVLSAETVPDAPPAQVRVE 400
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRY-IPSIGNNLQNFSQ-----SGLNDIQNLVR 413
+ S D M + K+ R+ + IG NL + +Q +
Sbjct: 401 GDMIVLPSAGGDGDDIMAAVSAVAGKLERFPLDEIGRNLNGALAAVNGVASSPALQQSLE 460
Query: 414 KLQETVNHFDDCLNNFE 430
L + + + +
Sbjct: 461 NLAGALAGVQELVRKAD 477
>gi|325273316|ref|ZP_08139588.1| toluene tolerance ABC transporter periplasmic substrate-binding
protein [Pseudomonas sp. TJI-51]
gi|324101549|gb|EGB99123.1| toluene tolerance ABC transporter periplasmic substrate-binding
protein [Pseudomonas sp. TJI-51]
Length = 161
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSASPSSDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSYTG-RVTLQLDKSVDNLPTDSTASILTAGLLGEKYIGISVG 117
>gi|257094946|ref|YP_003168587.1| Mammalian cell entry related domain-containing protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047470|gb|ACV36658.1| Mammalian cell entry related domain protein [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 555
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/413 (7%), Positives = 116/413 (28%), Gaps = 20/413 (4%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPD 90
G + GS L + + F I VG++ LDQ+ D
Sbjct: 160 GGTPGRFFRLKAATLGS---LDYGTPIYFRRIQVGQVASYSLDQDGRELTVRIFVNAPYD 216
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ P T + ++ L+ + ++ + + + +
Sbjct: 217 QFVKPETRFWQASGLDFSLSANGLNVQTESLASLLIGGLAFDTPDLNVQSEAAAAETSFE 276
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ ++ ++ + + +
Sbjct: 277 LFADQAVAMKAPERGATQYVLYFDESVRGLSAGAPVTLLGLPIGEVVSVRLDAGDRKKLQ 336
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
++ + + + KV + +R
Sbjct: 337 VRARVLVAAYPQRFLDVLADPQELTGGKVLTPALRKSIIEQLV------ARGLRAQLRTG 390
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
++ +D+ + S+++ + +++ + +++I ++ I +
Sbjct: 391 NLLTGQLYVALDYASNPASARIDWLSEPPVFPVMKGGLTDIEAKLTSILGKLER-LPIDA 449
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ ++ + L + + L+ + + E ++ +A+R++ + +
Sbjct: 450 IGSELKQSLAALGATLKNVDTLVKRWDGEL-TPELSATLVEARRSLAAAEGAFAAAGKTM 508
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ L D++ + +++ + ER+P+ ++ G+ +
Sbjct: 509 AP--------GSTTLEDLRATLTEVKRAAQSMRGLTDYLERHPEALIRGKSEE 553
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 39/112 (34%), Gaps = 10/112 (8%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
++ + + I+ + + + I S +GL ++V++
Sbjct: 20 RTRLSPVWI----IPIIAALLGGWIVVQKI---LAEGPTIEISFS-SAEGLEAGKTTVKY 71
Query: 61 NGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
NG+ VG + L + + ++ + L T+ + +AG +
Sbjct: 72 NGVDVGTVESLKVAADRQRINARVQMAPETRDWLLEDTSFWVVRPRIAGGSI 123
>gi|281421239|ref|ZP_06252238.1| mce related protein [Prevotella copri DSM 18205]
gi|281404774|gb|EFB35454.1| mce related protein [Prevotella copri DSM 18205]
Length = 299
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 84/284 (29%), Gaps = 6/284 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ L + + +F I +L N + I + GL + + +G VG
Sbjct: 6 EIKIALVAIVGILVMYFGINFLKGMNLFSTNNTYFIT--FDDIQGLGASTPIYADGYKVG 63
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ GL D + K I D + + A I + L G + L ++ +
Sbjct: 64 TVDGLEYDYKENGPIKVKVDIIKDLRIPQGSKAEIV-KDLMGNLQVNLLLANNPRERVEP 122
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + E K+ + ++ + + T
Sbjct: 123 GGIIPGAVNGGMMDKAA--NLVPVVEKMLPKLDSILTSVNALLADPALAASLHNVETITS 180
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ ++ + QV + + L +L + L KVNQ LE+
Sbjct: 181 NLTVSTRELNTLMAGLNKQVPGMIGKANGVLDNTNRLTANLASLDVQGTLNKVNQTLESA 240
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + ++D + D L+ D +
Sbjct: 241 HQFTEKLNSNQGSLGLLMNDT-KLYDNLTSTMGHADSLVIDLKA 283
>gi|260770297|ref|ZP_05879230.1| paraquat-inducible protein B [Vibrio furnissii CIP 102972]
gi|260615635|gb|EEX40821.1| paraquat-inducible protein B [Vibrio furnissii CIP 102972]
Length = 515
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/403 (9%), Positives = 108/403 (26%), Gaps = 30/403 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
I+ L V F G VGR+ D E +L + I +
Sbjct: 128 IVLTHREAGKLGVGDPVIFKGFTVGRVEKTSFDVET-RQALYQLFIFK----PYDSLIRT 182
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
R++ + + + + + P + + T+
Sbjct: 183 RSKFWLSSGVDLQLNTEGFELKLGSLESLLTGGVTFDSVPGMDSGDPLTEDMTNF----- 237
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ +++++ + +I + +
Sbjct: 238 -----RLYDDVKQLREGIYDEYIDFVMLFDESIRGLKEKAPVEYRGLRIGTVMKVPLRFP 292
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
S + ++ L + + + S + +R T +T + +
Sbjct: 293 TQEESFSVKRIPVLVRIELGRLFDHFHTDSMDEYSEKLKLEFARGLRGTLKTGSLITGAL 352
Query: 282 ---DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
D + S+ + + + T+ ++
Sbjct: 353 YIDTDFYPDAAKYEPSEFLGLSVFPTMRGGFAQVQKQVNDFLYKINKLPMEDTLESLNQT 412
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + + IN + E + D ++++ + T +
Sbjct: 413 LKTSERTLASAERMANSINKLLNQNETQQIPADIRQSLQQLQKTLDGY------------ 460
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+ + +D+++ +++L++ + F L P +V+G +
Sbjct: 461 GPNSTMYSDMESTLKELEKVMTEFKPVLKQLNDKPNALVFGVD 503
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 25/267 (9%), Positives = 75/267 (28%), Gaps = 13/267 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ ++ S+ GL + V + G+ +G ++ + L ++
Sbjct: 253 EYIDFVMLFDESIRGLKEKAPVEYRGLRIGTVMKVPLRFPTQEE---SFSVK-----RIP 304
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
I L + + EK + R + + +
Sbjct: 305 VLVRIELGRLFDHFHTDSMDEYSEKLKLEFARGLRGTLKTGSLITGALY-----IDTDFY 359
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + + ++ + A ++ I+ + + S+ T
Sbjct: 360 PDAAKYEPSEFLGLSVFPTMRGGFAQVQKQVNDFLYKINKLPMEDTLESLNQTLKTSERT 419
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + S++K++ + Q++ + + D+ T + ++
Sbjct: 420 LASAERMANSINKLLNQNETQQIPADIRQSLQQLQKTLDGYGPNSTMYSDMESTLKELEK 479
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLEN 303
V + +L + K + N
Sbjct: 480 VMTEFKPVLKQLNDKPNALVFGVDDVN 506
>gi|226349630|ref|YP_002776744.1| putative Mce family protein [Rhodococcus opacus B4]
gi|226245545|dbj|BAH55892.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 492
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 77/289 (26%), Gaps = 11/289 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK + +F + + S+Y N+ G + GL + V +
Sbjct: 1 MRSKLVRAQLVIFTLVAVVAVANSVYSYMGFNRLSGIGMYSVDVELERAGGLYASALVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + L + + H + D P+ ST A +R+ G Y++L +
Sbjct: 61 RGVDVGVVRSLDVTPD---HVTVHLQLDSDHPIPKSTDAYVRSVSAIGEQYVDLVPPTSQ 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ R + + + + +S + +++
Sbjct: 118 GPFLADGDVIDRSRTTLPVSAAQVVDEVSTLLEGL--------PKDDLKTTVDEAYAAFD 169
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T+S ++ ++ I T T +
Sbjct: 170 GAGPTLSRLIDSSRPLIALAQANLGPTTTLITDAEPVLTAVNSAGPDIARFSTDLASFTE 229
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q+ N + + + + + +
Sbjct: 230 QLTMNDAQIRGTLDNGPAFFDAFGGTLADLQPSLPLLLANLQSVGEVLR 278
>gi|170723416|ref|YP_001751104.1| hypothetical protein PputW619_4255 [Pseudomonas putida W619]
gi|169761419|gb|ACA74735.1| Mammalian cell entry related domain protein [Pseudomonas putida
W619]
Length = 161
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSASPSSDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSYTG-RVTLQLDGKVDNLPTDSTASILTAGLLGEKYIGISVG-G 118
Query: 120 EKKTIFQIATERNQR 134
E++ + + AT + +
Sbjct: 119 EEEVLKEGATIHDTQ 133
>gi|192359021|ref|YP_001982088.1| hypothetical protein CJA_1608 [Cellvibrio japonicus Ueda107]
gi|190685186|gb|ACE82864.1| conserved domain protein [Cellvibrio japonicus Ueda107]
Length = 324
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/294 (12%), Positives = 97/294 (32%), Gaps = 4/294 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++K+ + +G FV F ++ + S + V++ GSV GL + V+
Sbjct: 3 KTKSLH--IGSFVTGAFILVFIALLFFSG-GKLFSQKERVVMYFDGSVQGLQVGAPVKLK 59
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +G IV + L+ + N L + D + T+ I+ +
Sbjct: 60 GVVLGDIVDIQLNIQNDNQPLVT-AVTADLIMKRITSKGADVSEDFFHEAIKQGLRAQLN 118
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
F + TP + ++ +D + + E K L +
Sbjct: 119 YQSFLTGLLYVELDFFPNTPVRLYKLQNDLFELPTVATDFEEISKNLQEINIKSLVDNLD 178
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ +A + D ++ + + N + + + + +
Sbjct: 179 QVAQQLNSIARSGVIQDTLLSFDKAAKSMDKTANNLDREMAQLNKQLDITTRELNRLLRT 238
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ E + + N ++ + ++ QT + + L++ ++ ++
Sbjct: 239 LNEQTPILAQNLNQNLLSLQQSLDQFTRVAQTLEHTLSEDAPLVNQLNTTLQDV 292
>gi|289647004|ref|ZP_06478347.1| toluene tolerance protein Ttg2C, putative [Pseudomonas syringae pv.
aesculi str. 2250]
Length = 155
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/135 (22%), Positives = 58/135 (42%), Gaps = 3/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ T VGLF+++ + +S + + + ++ GL+ + V
Sbjct: 1 MQNRAIETGVGLFLLAGILALLLLALRVSGLSTSASTDSYKLYAYFDNIAGLTVRAKVSM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD + I+ L +TA+I T GL G YI LS
Sbjct: 61 AGVTIGKVTAIDLDHDTFTG-RVTLEIQKKVDNLPSDSTASILTAGLLGEKYIGLSVG-G 118
Query: 120 EKKTIFQIATERNQR 134
+ K + AT + +
Sbjct: 119 DDKLLKDGATIHDTQ 133
>gi|315442589|ref|YP_004075468.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260892|gb|ADT97633.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 352
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+F ++++ + S + G++ + V +GI
Sbjct: 7 SNPLRTGIFGIALVACLVLVSFGYSSL-PFFPQGKAYEAYF-ADAGGITPGNDVNVSGIN 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VG++ + L + + + + + + I+T + G
Sbjct: 65 VGKVNSVELAGD---AAKITFTVNREVKVGDQSLVAIKTDTVLGEK 107
>gi|258545604|ref|ZP_05705838.1| paraquat-inducible protein B [Cardiobacterium hominis ATCC 15826]
gi|258519156|gb|EEV88015.1| paraquat-inducible protein B [Cardiobacterium hominis ATCC 15826]
Length = 543
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/404 (8%), Positives = 119/404 (29%), Gaps = 28/404 (6%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRT 103
I S G++ +++ + GI VG+I + + Y N + A D + +T +
Sbjct: 158 ITDSASGVNVGTAIYYRGISVGQIEQIRFSERYDNLYLTAFIHAPYDHLITNNTKFWNIS 217
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR 163
+ + + + + + + + + S
Sbjct: 218 GINFSMGAEGANLEVESLEALVRGGITFSTPTTL----------------NTNDTPASPG 261
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
+ + EN T E + + + + + +
Sbjct: 262 TVYTLFENERASTERTGFEKEYYVVYFDDTTRGLRQGAPVYFNGMSIGEVIDIRLLYDET 321
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + + + N + + + + + ++
Sbjct: 322 KNTAVTPVLIALEPDRIDRVNRQEKRDRNLITDLVK-HGLQASLETGSLITGDKIITLNQ 380
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
D S K + ++ + + + + + + ++ + N + T+ L
Sbjct: 381 YPDDIRSLRKDEYSNYPVLPSRAGSISQLTDDISAIVASVKKLPLEEIANNTKEATAALK 440
Query: 344 DSSQK--FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ L + ++ + + Q+A + ++++ I ++G L+
Sbjct: 441 SALATPAVKTLGASLDKTLKQLD--KTLQSVQKAGDSTDKALAQLDKQIKTLGKQLEQTL 498
Query: 402 QSGLND------IQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + +Q ++ +Q ++ +D + + P ++ G
Sbjct: 499 YNIGPESNLTYTLQETLKTVQRSMKSINDVMRKIDDKPNVLIMG 542
Score = 56.9 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 34/105 (32%), Gaps = 3/105 (2%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ + + ++ + GL + V FNG+ +G ++ + L + ++ ++
Sbjct: 272 ASTERTGFEKEYYVVYFDDTTRGLRQGAPVYFNGMSIGEVIDIRLLYDETKNTAVTPVL- 330
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
L P + Q I + ++ +
Sbjct: 331 --IALEPDRIDRVNRQEKRDRNLITDLVKHGLQASLETGSLITGD 373
Score = 45.3 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 47/463 (10%), Positives = 115/463 (24%), Gaps = 43/463 (9%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL+ ++ + I S +GL + +R+ + VG + + L
Sbjct: 19 IVALGIGLWLA-YSRLSQIGPNIHITFT-SAEGLEAGKTKIRYKDLAVGTVTSIDLS-ND 75
Query: 78 PNHSLAKALIRPDTP--LYPSTTATI-----------RTQGLAGITYIELSTLRK----- 119
+ A + L + I + YI +S ++
Sbjct: 76 LKQIIVTAQMSRTAEPLLKKDSQFWIVKPQISASGVTGLGTIVSGNYIAVSPGKEADSAN 135
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + ++ + + N S I++I +
Sbjct: 136 QFAGLDEAPQIQSTEEGLRVRLITDSASGVNVGTAIYYRGISVGQIEQIRFSERYDNLYL 195
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
A I L N + + + ++ N + +
Sbjct: 196 TAFIHAPYDHLITNNTKFWNI--SGINFSMGAEGANLEVESLEALVRGGITFSTPTTLNT 253
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH------LLSDFSSKMK 293
N + F T + F + + + +
Sbjct: 254 NDTPASPGTVYTLFENERASTERTGFEKEYYVVYFDDTTRGLRQGAPVYFNGMSIGEVID 313
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ +N A + + I + Q ++ + I + + +
Sbjct: 314 IRLLYDETKNTAVTPVLIALEPDRIDRVNRQEKRDRNLITDLVKHGLQASLETGSLITGD 373
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
I + SL KD + I++ I + + + L +I N +
Sbjct: 374 KIITLNQYPDDIRSLRKDEYSNYPVLPSRAGSISQLTDDISAIVASVKKLPLEEIANNTK 433
Query: 414 KLQETV-------------NHFDDCLNNFERNPQDIVWGREKG 443
+ + D L ++ Q + +
Sbjct: 434 EATAALKSALATPAVKTLGASLDKTLKQLDKTLQSVQKAGDST 476
>gi|313499344|gb|ADR60710.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 546
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/405 (9%), Positives = 93/405 (22%), Gaps = 36/405 (8%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + L SS+ + IPVG +V L + + DT + T
Sbjct: 168 VLVASDLGSLDIGSSIYYRKIPVGEVVSFALQGDGKGVEIGVFVQAPYDTFVTADTRFWN 227
Query: 102 RTQG-LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + + + A P+ + +S
Sbjct: 228 ASGIDMQIGANGLKVDTESLSSILVGGLAFGSPDFAAQAEPAADQARFQLFADRDMALSP 287
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
Q + ++ + + ++ +
Sbjct: 288 PHGQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQTFPVVVDAVI--- 344
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + + R+ TF E G +
Sbjct: 345 ---------------------YPQRLGPVHRKMLAVFKHTEGDMEGARKLIGTFVEHGLR 383
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ + + + + + I Q +E I
Sbjct: 384 AQARSGNLITGQMFISLDFYPDAPKVTFDMAANPIMIPTLPGSLEQLQEQLQRVVERIAK 443
Query: 341 NL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + ++ +L + + A+ T N I +
Sbjct: 444 LPLESIAGNLDGSLRELRASLKQFNGQTL-PEVKVALDEVHKTLRTANSAISEDSPQRER 502
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + +L+ D + R+P+ ++ GR K +
Sbjct: 503 --------MGETLDELERMSRSLRDLADYLGRHPESLIRGRPKAA 539
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 67/247 (27%), Gaps = 6/247 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + +R ++ GLS + V F G+ GR+ + LD + + D +YP
Sbjct: 290 GQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQ---TFPVVVDAVIYP 346
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+ + L + + + + E RA + + +
Sbjct: 347 QRLGPVHRKML--AVFKHTEGDMEGARKLIGTFVEHGLRAQARSGNLITGQMFISLDFYP 404
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ I P + + V ++ + + +
Sbjct: 405 DAPKVTFDMAANPIMIPTLPGSLEQLQEQLQRVVERIAKLPLESIAGNLDGSLRELRASL 464
Query: 216 TFNTITDLITSLDKMIK-AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
L + + L+ N + ++ D++ +R+
Sbjct: 465 KQFNGQTLPEVKVALDEVHKTLRTANSAISEDSPQRERMGETLDELERMSRSLRDLADYL 524
Query: 275 QEVGQKI 281
+ +
Sbjct: 525 GRHPESL 531
>gi|269128540|ref|YP_003301910.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268313498|gb|ACY99872.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 343
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/322 (14%), Positives = 95/322 (29%), Gaps = 16/322 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + +G+FV + ++ D + I V GL + VR
Sbjct: 1 MRTASAALKLGIFVTVTGLVTAVLALTIANVRFVDSVRYK---AIFTDVTGLLKNDDVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPD----TPLYPSTTATIRTQGLAGITYIELST 116
+G+ VG++ + L + I + L S +R + L G YIEL+
Sbjct: 58 SGVRVGQVEDIKL---RGTQAEVTFSIGREGVFRAGLPRSVELHLRYRNLVGQRYIELTD 114
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
A E + + + Q++ + +
Sbjct: 115 TAP------ANAGEYLRPGETIPAERTHPALDLTVLFNGFRPLFKALEPQQVNTLAMQIV 168
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T T+++VLA+ S + + QV D+ NT D +
Sbjct: 169 QTLQGEAGTVNSVLAHVASLTNTLADRDQVIGQVIDNLNTVLGTIDSRHEQVNKMVLDLR 228
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
V+ + + + ++ + T +++ + ++ L + K
Sbjct: 229 ALVSGLAADREAIFDSVAAINQLTGTTTELLKDVRPGLKSDIAHLNKLADTLADHEKDLN 288
Query: 297 TSAFLENIADSTSNMRSSISAI 318
SS +
Sbjct: 289 LLFKRTPDRIERLMAASSYGSW 310
>gi|296394451|ref|YP_003659335.1| mammalian cell entry-like domain-containing protein [Segniliparus
rotundus DSM 44985]
gi|296181598|gb|ADG98504.1| Mammalian cell entry related domain protein [Segniliparus rotundus
DSM 44985]
Length = 363
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 49/136 (36%), Gaps = 9/136 (6%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
K + +++ F S+ + ++ G V GL VR +G+
Sbjct: 2 KAGSALLKFLAFALIVFVCSSVMFRILTSPVKGATDRFTAVF-NDVSGLWAGGDVRMSGV 60
Query: 64 PVGRIVGLFL-----DQEYP--NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
VG++ + D + P H+ + P+Y + +R Q L GI Y+E+
Sbjct: 61 LVGKVERVEPVVDGADPDNPDLAHAHVVFTLERKYPVYRDSRFAVRYQNLLGIRYLEIIP 120
Query: 117 LR-KEKKTIFQIATER 131
+ + + R
Sbjct: 121 PEGPGNQRLKDGSVIR 136
>gi|330430335|gb|AEC21669.1| virulence protein transporter [Pusillimonas sp. T7-7]
Length = 167
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 2/99 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S+ G +V ++ GL + V+ +G+ VGR+ + D ++A +
Sbjct: 32 SSFSFGSTYQVQAYF-DNLGGLKVRAPVKSSGVVVGRVSSIGFD-NQRFQAVATLDLEEK 89
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
++A+I T GL G YI L+ +EK
Sbjct: 90 YTFPTDSSASILTSGLLGEQYIGLTPGGEEKNLAQGGQI 128
>gi|104780317|ref|YP_606815.1| toluene tolerance ABC transporter periplasmic substrate-binding
protein [Pseudomonas entomophila L48]
gi|95109304|emb|CAK14001.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Pseudomonas entomophila L48]
Length = 161
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSASPSSDTYKVYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSYTG-RVTLQLDKQVDNLPTDSTASILTAGLLGEKYIGISVG 117
>gi|289552426|ref|ZP_06441636.1| MCE-family protein mce1F [Mycobacterium tuberculosis KZN 605]
gi|289437058|gb|EFD19551.1| MCE-family protein mce1F [Mycobacterium tuberculosis KZN 605]
Length = 514
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 81/255 (31%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + +P S GL ++V + GI +G++ + + +
Sbjct: 26 YYLRIPSLVGIGQYTLKADLPAS-GGLYPTANVTYRGITIGKVTAVEPTDQG---ARVTM 81
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + + +A + + G YI+L + K T P+ N
Sbjct: 82 SIASNYKIPVDASANVHSVSAVGEQYIDLVSTGAPGKYFSSGQTITKGTVPSEIGPALDN 141
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A ++KI + + + L + + + I NI ++ ++ +
Sbjct: 142 SNRGLAALPTEKIGLLLDETAQAVGGLGPALQRLVDSTQAIVGDFKTNIGDVNDIIENSG 201
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + + A Q V IL +++ V +++
Sbjct: 202 PILDSQVNTGDQIERWARKLNNLAAQTATRDQNVRSILSQAAPTADEVNAVFSGVRDSLP 261
Query: 266 DVRETTQTFQEVGQK 280
+ ++ ++
Sbjct: 262 QTLANLEVVFDMLKR 276
>gi|215448452|ref|ZP_03435204.1| MCE-family protein mce1F [Mycobacterium tuberculosis T85]
gi|289760276|ref|ZP_06519654.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289715840|gb|EFD79852.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
Length = 435
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 81/255 (31%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + +P S GL ++V + GI +G++ + + +
Sbjct: 27 YYLRIPSLVGIGQYTLKADLPAS-GGLYPTANVTYRGITIGKVTAVEPTDQG---ARVTM 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + + +A + + G YI+L + K T P+ N
Sbjct: 83 SIASNYKIPVDASANVHSVSAVGEQYIDLVSTGAPGKYFSSGQTITKGTVPSEIGPALDN 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A ++KI + + + L + + + I NI ++ ++ +
Sbjct: 143 SNRGLAALPTEKIGLLLDETAQAVGGLGPALQRLVDSTQAIVGDFKTNIGDVNDIIENSG 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + + A Q V IL +++ V +++
Sbjct: 203 PILDSQVNTGDQIERWARKLNNLAAQTATRDQNVRSILSQAAPTADEVNAVFSGVRDSLP 262
Query: 266 DVRETTQTFQEVGQK 280
+ ++ ++
Sbjct: 263 QTLANLEVVFDMLKR 277
>gi|215425380|ref|ZP_03423299.1| MCE-family protein mce1F [Mycobacterium tuberculosis T92]
gi|289748650|ref|ZP_06508028.1| MCE-family protein mce1F [Mycobacterium tuberculosis T92]
gi|289689237|gb|EFD56666.1| MCE-family protein mce1F [Mycobacterium tuberculosis T92]
Length = 515
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 81/255 (31%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + +P S GL ++V + GI +G++ + + +
Sbjct: 27 YYLRIPSLVGIGQYTLKADLPAS-GGLYPTANVTYRGITIGKVTAVEPTDQG---ARVTM 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + + +A + + G YI+L + K T P+ N
Sbjct: 83 SIASNYKIPVDASANVHSVSAVGEQYIDLVSTGAPGKYFSSGQTITKGTVPSEIGPALDN 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A ++KI + + + L + + + I NI ++ ++ +
Sbjct: 143 SNRGLAALPTEKIGLLLDETAQAVGGLGPALQRLVDSTQAIVGDFKTNIGDVNDIIENSG 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + + A Q V IL +++ V +++
Sbjct: 203 PILDSQVNTGDQIERWARKLNNLAAQTATRDQNVRSILSQAAPTADEVNAVFSGVRDSLP 262
Query: 266 DVRETTQTFQEVGQK 280
+ ++ ++
Sbjct: 263 QTLANLEVVFDMLKR 277
>gi|15607315|ref|NP_214688.1| MCE-family protein MCE1F [Mycobacterium tuberculosis H37Rv]
gi|148659938|ref|YP_001281461.1| MCE-family protein Mce1F [Mycobacterium tuberculosis H37Ra]
gi|167970295|ref|ZP_02552572.1| MCE-family protein Mce1F [Mycobacterium tuberculosis H37Ra]
gi|306774264|ref|ZP_07412601.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu001]
gi|306974598|ref|ZP_07487259.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu010]
gi|307082307|ref|ZP_07491477.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu011]
gi|307082651|ref|ZP_07491764.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu012]
gi|2213511|emb|CAB09741.1| MCE-FAMILY PROTEIN MCE1F [Mycobacterium tuberculosis H37Rv]
gi|148504090|gb|ABQ71899.1| MCE-family protein Mce1F [Mycobacterium tuberculosis H37Ra]
gi|308217098|gb|EFO76497.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu001]
gi|308356002|gb|EFP44853.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu010]
gi|308359957|gb|EFP48808.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu011]
gi|308367524|gb|EFP56375.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu012]
gi|328864218|gb|AEB53192.1| MCE family protein 1F [Mycobacterium tuberculosis]
Length = 515
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 81/255 (31%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + +P S GL ++V + GI +G++ + + +
Sbjct: 27 YYLRIPSLVGIGQYTLKADLPAS-GGLYPTANVTYRGITIGKVTAVEPTDQG---ARVTM 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + + +A + + G YI+L + K T P+ N
Sbjct: 83 SIASNYKIPVDASANVHSVSAVGEQYIDLVSTGAPGKYFSSGQTITKGTVPSEIGPALDN 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A ++KI + + + L + + + I NI ++ ++ +
Sbjct: 143 SNRGLAALPTEKIGLLLDETAQAVGGLGPALQRLVDSTQAIVGDFKTNIGDVNDIIENSG 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + + A Q V IL +++ V +++
Sbjct: 203 PILDSQVNTGDQIERWARKLNNLAAQTATRDQNVRSILSQAAPTADEVNAVFSGVRDSLP 262
Query: 266 DVRETTQTFQEVGQK 280
+ ++ ++
Sbjct: 263 QTLANLEVVFDMLKR 277
>gi|15839552|ref|NP_334589.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31791352|ref|NP_853845.1| MCE-family protein MCE1F [Mycobacterium bovis AF2122/97]
gi|121636086|ref|YP_976309.1| MCE-family protein mce1F [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148821366|ref|YP_001286120.1| MCE-family protein mce1F [Mycobacterium tuberculosis F11]
gi|215406167|ref|ZP_03418348.1| MCE-family protein mce1F [Mycobacterium tuberculosis 02_1987]
gi|215414039|ref|ZP_03422698.1| MCE-family protein mce1F [Mycobacterium tuberculosis 94_M4241A]
gi|215433094|ref|ZP_03431013.1| MCE-family protein mce1F [Mycobacterium tuberculosis EAS054]
gi|218755908|ref|ZP_03534704.1| MCE-family protein mce1F [Mycobacterium tuberculosis GM 1503]
gi|219555972|ref|ZP_03535048.1| MCE-family protein mce1F [Mycobacterium tuberculosis T17]
gi|224988559|ref|YP_002643246.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253797096|ref|YP_003030097.1| MCE-family protein mce1F [Mycobacterium tuberculosis KZN 1435]
gi|254366625|ref|ZP_04982669.1| MCE-family protein mce1F [Mycobacterium tuberculosis str. Haarlem]
gi|254549113|ref|ZP_05139560.1| MCE-family protein mce1F [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185037|ref|ZP_05762511.1| MCE-family protein mce1F [Mycobacterium tuberculosis CPHL_A]
gi|260199177|ref|ZP_05766668.1| MCE-family protein mce1F [Mycobacterium tuberculosis T46]
gi|260203319|ref|ZP_05770810.1| MCE-family protein mce1F [Mycobacterium tuberculosis K85]
gi|289441549|ref|ZP_06431293.1| MCE-family protein mce1F [Mycobacterium tuberculosis T46]
gi|289445705|ref|ZP_06435449.1| MCE-family protein mce1F [Mycobacterium tuberculosis CPHL_A]
gi|289568073|ref|ZP_06448300.1| MCE-family protein mce1F [Mycobacterium tuberculosis T17]
gi|289572754|ref|ZP_06452981.1| MCE-family protein mce1F [Mycobacterium tuberculosis K85]
gi|289747941|ref|ZP_06507319.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289756239|ref|ZP_06515617.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289764290|ref|ZP_06523668.1| MCE-family protein mce1F [Mycobacterium tuberculosis GM 1503]
gi|297632652|ref|ZP_06950432.1| MCE-family protein mce1F [Mycobacterium tuberculosis KZN 4207]
gi|297729627|ref|ZP_06958745.1| MCE-family protein mce1F [Mycobacterium tuberculosis KZN R506]
gi|298527566|ref|ZP_07014975.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|306779008|ref|ZP_07417345.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu002]
gi|306782796|ref|ZP_07421118.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu003]
gi|306787163|ref|ZP_07425485.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu004]
gi|306791719|ref|ZP_07430021.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu005]
gi|306795763|ref|ZP_07434065.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu006]
gi|306801759|ref|ZP_07438427.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu008]
gi|306805970|ref|ZP_07442638.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu007]
gi|306970366|ref|ZP_07483027.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu009]
gi|313656953|ref|ZP_07813833.1| MCE-family protein mce1F [Mycobacterium tuberculosis KZN V2475]
gi|13879664|gb|AAK44403.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31616937|emb|CAD93044.1| MCE-FAMILY PROTEIN MCE1F [Mycobacterium bovis AF2122/97]
gi|121491733|emb|CAL70195.1| MCE-family protein mce1F [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|134152137|gb|EBA44182.1| MCE-family protein mce1F [Mycobacterium tuberculosis str. Haarlem]
gi|148719893|gb|ABR04518.1| MCE-family protein mce1F [Mycobacterium tuberculosis F11]
gi|224771672|dbj|BAH24478.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253318599|gb|ACT23202.1| MCE-family protein mce1F [Mycobacterium tuberculosis KZN 1435]
gi|289414468|gb|EFD11708.1| MCE-family protein mce1F [Mycobacterium tuberculosis T46]
gi|289418663|gb|EFD15864.1| MCE-family protein mce1F [Mycobacterium tuberculosis CPHL_A]
gi|289537185|gb|EFD41763.1| MCE-family protein mce1F [Mycobacterium tuberculosis K85]
gi|289541826|gb|EFD45475.1| MCE-family protein mce1F [Mycobacterium tuberculosis T17]
gi|289688469|gb|EFD55957.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289696826|gb|EFD64255.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289711796|gb|EFD75812.1| MCE-family protein mce1F [Mycobacterium tuberculosis GM 1503]
gi|298497360|gb|EFI32654.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|308328036|gb|EFP16887.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu002]
gi|308332316|gb|EFP21167.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu003]
gi|308336067|gb|EFP24918.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu004]
gi|308339698|gb|EFP28549.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu005]
gi|308343705|gb|EFP32556.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu006]
gi|308347425|gb|EFP36276.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu007]
gi|308351477|gb|EFP40328.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu008]
gi|308352052|gb|EFP40903.1| MCE-family protein mce1F [Mycobacterium tuberculosis SUMu009]
gi|323717163|gb|EGB26372.1| MCE-family protein mce1F [Mycobacterium tuberculosis CDC1551A]
gi|326905930|gb|EGE52863.1| MCE-family protein mce1F [Mycobacterium tuberculosis W-148]
gi|328456883|gb|AEB02306.1| MCE-family protein mce1F [Mycobacterium tuberculosis KZN 4207]
Length = 515
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 81/255 (31%), Gaps = 4/255 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y+L + + +P S GL ++V + GI +G++ + + +
Sbjct: 27 YYLRIPSLVGIGQYTLKADLPAS-GGLYPTANVTYRGITIGKVTAVEPTDQG---ARVTM 82
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + + +A + + G YI+L + K T P+ N
Sbjct: 83 SIASNYKIPVDASANVHSVSAVGEQYIDLVSTGAPGKYFSSGQTITKGTVPSEIGPALDN 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A ++KI + + + L + + + I NI ++ ++ +
Sbjct: 143 SNRGLAALPTEKIGLLLDETAQAVGGLGPALQRLVDSTQAIVGDFKTNIGDVNDIIENSG 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + + A Q V IL +++ V +++
Sbjct: 203 PILDSQVNTGDQIERWARKLNNLAAQTATRDQNVRSILSQAAPTADEVNAVFSGVRDSLP 262
Query: 266 DVRETTQTFQEVGQK 280
+ ++ ++
Sbjct: 263 QTLANLEVVFDMLKR 277
>gi|226946432|ref|YP_002801505.1| PqiB family protein [Azotobacter vinelandii DJ]
gi|226721359|gb|ACO80530.1| PqiB family protein [Azotobacter vinelandii DJ]
Length = 537
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/427 (11%), Positives = 114/427 (26%), Gaps = 45/427 (10%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
F+ + Q D P E ++R + L+ S V F + VG++VG LD
Sbjct: 150 FAALEVPPVIQLDTPGREFVLR-SADLGSLAMGSPVFFRRLQVGQVVGYQLDGNGRG--- 205
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ + P Y T I + + T S
Sbjct: 206 VSLRLFVNAP------------------YDRFVTDNSRFWNASGIDVKLGAGGIEVDTQS 247
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
+ + + + +S + + + + + D+ +
Sbjct: 248 LASLLLGGVAFETPE--ESVALPGAAPDTPFELFADRARAMRNPERDVLKMVLLFDESLR 305
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
+ +T + L+ + I + + +
Sbjct: 306 GLETGAPVDFRGIAIGEVTAIRVELEPDSRRIVMPVEISLYPERLRLRSRDKDLPRLSGE 365
Query: 263 TVHDVRE--TTQTFQEVGQKIDHLLSDFS---SKMKSKETSAFLENIADSTSNMRSSISA 317
E + + + + L T+ +
Sbjct: 366 ARRRFLEELVAKGLRAQLRSGNLLTGQLYVGLDFFPQATTARIDWDSEPPGLPTTGGSLG 425
Query: 318 IREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
+ + QR +E I ++L + Q + L+ +++ + + +
Sbjct: 426 ELQASLQRVAGRLEKLPLEQIGADLRQTLQTTSRLLHRLD--------TQVAPEVVATLG 477
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
R + + + D + +R+L T + ER+P+ ++
Sbjct: 478 EARKAVDTAQNMMA--------ADEPLQQDTREAIRELGRTARSLRALADYLERHPEALL 529
Query: 438 WGREKGS 444
WG++K
Sbjct: 530 WGKKKSE 536
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 38/97 (39%), Gaps = 8/97 (8%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQ 75
++ WL+ + D VI + S +GL + V++ + +G + + L +
Sbjct: 32 LVAALIGG--WLAVKSILDRG--PVIDIVFKSAEGLEAGKTKVKYKDVDIGLVTAVSLSR 87
Query: 76 EYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
+ LA A + D L T + ++G +
Sbjct: 88 D-LRQVLASAELVKDFQPHLVEDTRFWLVKPRISGGS 123
>gi|156975124|ref|YP_001446031.1| hypothetical protein VIBHAR_02851 [Vibrio harveyi ATCC BAA-1116]
gi|156526718|gb|ABU71804.1| hypothetical protein VIBHAR_02851 [Vibrio harveyi ATCC BAA-1116]
Length = 548
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/404 (7%), Positives = 105/404 (25%), Gaps = 32/404 (7%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATI 101
+ L V + G VGR+ D E + +P D+ + T +
Sbjct: 162 VLTHREAGKLGVGDPVIYKGFTVGRVEATSFDVETRRALYQLFIFKPYDSLVRTKTHFWL 221
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + +++ + + A
Sbjct: 222 TSGVDLQLNAGGFEVKFGSLESLITGGVTFDTVPGLDAGDEVTEDM-------------- 267
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ +++++ + ++ + +
Sbjct: 268 --LHFRLFDDVKQVREGMYDEYIQFVMMFEESVRGLKAKAPVEYRGLRIGTVMKVPMRMP 325
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + SS +R T +T + +
Sbjct: 326 RPDEDFSAKKIPVLVRIELGRVYENLPSSQLQKFKEKLEEEFTKGLRGTLKTGNLLTGAL 385
Query: 282 ---DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
D + SK + + T+N++
Sbjct: 386 YIDTDFYPDEEPYVPSKFEDYDVFPTKQGGFAQVQRQVNDFLTKLNGLPMEDTLNSLNKT 445
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
N + + + ++ + ++ ++ D ++++ + T +
Sbjct: 446 LKNSEKTLASAERVANSVDRLLNQEDTKAIPADIRKSLEQLQKTLDGY------------ 493
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ + +++++ +++L++ + F L P +V+G ++
Sbjct: 494 GPNSTMYSEMESTLKELEQVMTEFKPVLKQLNEKPNSLVFGEDE 537
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 24/262 (9%), Positives = 75/262 (28%), Gaps = 15/262 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-----FLDQEYPNH---SLAKALIR 88
+ ++ SV GL + V + G+ +G ++ + D+++ L + +
Sbjct: 286 EYIQFVMMFEESVRGLKAKAPVEYRGLRIGTVMKVPMRMPRPDEDFSAKKIPVLVRIELG 345
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
PS+ + + + + + + A + P Y
Sbjct: 346 RVYENLPSSQLQ-KFKEKLEEEFTKGLRGTLKTGNLLTGALYIDTD----FYPDEEPYVP 400
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
S E+ + Q + + +E L + + +K + + +
Sbjct: 401 SKFEDYDVFPTKQGGFAQVQRQVNDFLTKLNGLPMEDTLNSLNKTLKNSEKTLASAERVA 460
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+S D + + K ++ + + + ++ + + +
Sbjct: 461 NSVDRLLNQEDTKAIPADIRKSLEQLQKTLDG--YGPNSTMYSEMESTLKELEQVMTEFK 518
Query: 269 ETTQTFQEVGQKIDHLLSDFSS 290
+ E + + +
Sbjct: 519 PVLKQLNEKPNSLVFGEDEVND 540
>gi|84494804|ref|ZP_00993923.1| putative mce-related protein [Janibacter sp. HTCC2649]
gi|84384297|gb|EAQ00177.1| putative mce-related protein [Janibacter sp. HTCC2649]
Length = 413
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 78/262 (29%), Gaps = 8/262 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G V +V GL S VR G+ VG++ + E + D +
Sbjct: 28 RGEKVTVTGDFARAV-GLYAGSDVRVLGVRVGKVTAVEPRGET---VRVTFEVDEDIKVP 83
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
+ A + L Y++L + A +R A P ++ + ++
Sbjct: 84 ANAQAAVVAPSLVSDRYVQLLPAYTSGPVMQNGAAIPRERT---AVPVELDRISQSLDDL 140
Query: 155 SKKISDSSRHIQ-KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + ++ N + ++ + + + +
Sbjct: 141 MVALGPEGANKEGALSRVLDTSARNLKGNGQNLNDMNRGLSQAVQTFAEGRGDLFATVKN 200
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
TF + + + + + +Q+ S + + V++
Sbjct: 201 LETFTGMLATNDAQVRRLNTDLSKVSDQLDGERDDLSAALKNLAVALSEISSFVKDNRAV 260
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ ++ L + +SK +
Sbjct: 261 LTDDVDQLTKLTTAVASKRDAL 282
>gi|148548349|ref|YP_001268451.1| hypothetical protein Pput_3139 [Pseudomonas putida F1]
gi|148512407|gb|ABQ79267.1| Mammalian cell entry related domain protein [Pseudomonas putida F1]
Length = 546
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/405 (9%), Positives = 93/405 (22%), Gaps = 36/405 (8%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + L SS+ + IPVG +V L + + DT + T
Sbjct: 168 VLVASDLGSLDIGSSIYYRKIPVGEVVSFALQGDGKGVEIGVFVQAPYDTFVTADTRFWN 227
Query: 102 RTQG-LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + + + A P+ + +S
Sbjct: 228 ASGIDMQIGANGLKVDTESLSSILVGGLAFGSPDFAAQAEPAADQARFQLFADRDMALSP 287
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
Q + ++ + + ++ +
Sbjct: 288 PHGQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQSFPVVVDAVI--- 344
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + + R+ TF E G +
Sbjct: 345 ---------------------YPQRLGPVHRKMLAVFKHTEGDMEGARKLIGTFVEHGLR 383
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ + + + + + I Q +E I
Sbjct: 384 AQARSGNLITGQMFISLDFYPDAPKVTFDMAANPIMIPTLPGSLEQLQEQLQRVMERIAK 443
Query: 341 NL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + ++ +L + + A+ T N I +
Sbjct: 444 LPLESIAGNLDGSLRELRASLRQFNGQTL-PEVKVALDEVHKTLRTANSAISEDSPQRER 502
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + +L+ D + R+P+ ++ GR K +
Sbjct: 503 --------MGETLDELERMSRSLRDLADYLGRHPESLIRGRPKAA 539
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 67/247 (27%), Gaps = 6/247 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + +R ++ GLS + V F G+ GR+ + LD + + D +YP
Sbjct: 290 GQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQ---SFPVVVDAVIYP 346
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+ + L + + + + E RA + + +
Sbjct: 347 QRLGPVHRKML--AVFKHTEGDMEGARKLIGTFVEHGLRAQARSGNLITGQMFISLDFYP 404
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ I P + + + ++ + + +
Sbjct: 405 DAPKVTFDMAANPIMIPTLPGSLEQLQEQLQRVMERIAKLPLESIAGNLDGSLRELRASL 464
Query: 216 TFNTITDLITSLDKMIK-AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
L + + L+ N + ++ D++ +R+
Sbjct: 465 RQFNGQTLPEVKVALDEVHKTLRTANSAISEDSPQRERMGETLDELERMSRSLRDLADYL 524
Query: 275 QEVGQKI 281
+ +
Sbjct: 525 GRHPESL 531
>gi|118471840|ref|YP_890124.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118173127|gb|ABK74023.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 352
Score = 74.2 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 12/103 (11%), Positives = 32/103 (31%), Gaps = 5/103 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F + ++ + + + G+ + V +GI VG+
Sbjct: 10 LRTGIFGIVLVTAVVLVSFGYTGL-PFFPQGKPYEAYF-ADAGGIEVGNDVNVSGITVGK 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + L + + + + + I+T + G
Sbjct: 68 VSDVELAGD---AAKVTFTVDRKIKVGDQSLVAIKTDTVLGQK 107
>gi|33860847|ref|NP_892408.1| putative ABC transporter [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|33633789|emb|CAE18748.1| possible ABC transporter [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 281
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 77/283 (27%), Gaps = 6/283 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG ++ L F +WL + + GLS S V +
Sbjct: 1 MRRSLRDSIVGFSLLGGLLVFTFFSFWLRGVKLSSKNWY--LFAEFNNASGLSKKSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG I + L + P+ L A + T G ++
Sbjct: 59 RGILVGSIEDI-LFTNESIKAKIVLN-NPEIILPKPAFARVVTNSFLGGDVQVALETSEK 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR--HIQKIIENIEKPLTT 178
++ G + S + ++ IE + +
Sbjct: 117 TIPKNTPKAISDKCDSKLIICQGDTITGKQLSSLSNITNRINQLLKESNQENLIENVVNS 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+T + +++ + + + N I I + + +
Sbjct: 177 IDQFDKTQENLDELIYLSKQEIIRVKPLIKEVTIAAGHLNNILSTINDEETLKDIKLTIE 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + ++ + + +R+ T + +I
Sbjct: 237 AAESISGKFDNMSDDFEQLMKDKELTKSIRDLTIGLSKFLNEI 279
>gi|77463762|ref|YP_353266.1| ABC transporter substrate-binding protein [Rhodobacter sphaeroides
2.4.1]
gi|221639632|ref|YP_002525894.1| hypothetical protein RSKD131_1533 [Rhodobacter sphaeroides KD131]
gi|77388180|gb|ABA79365.1| possible ABC transporter, substrate-binding protein [Rhodobacter
sphaeroides 2.4.1]
gi|221160413|gb|ACM01393.1| Mammalian cell entry related domain protein precursor [Rhodobacter
sphaeroides KD131]
Length = 156
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 26/114 (22%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 22 FFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
I + + D + SVDG+S + VR G+ VG + GL L+ +
Sbjct: 19 IGFIVYAGQVAGITRDSGSYPLKASF-RSVDGISVGTDVRLAGVKVGSVTGLALNPQTY- 76
Query: 80 HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ A ++ L + I ++GL G Y+EL + E Q
Sbjct: 77 FADATISVKQGIELPTDSAILISSEGLLGGNYVELVPGGALETLAAGEEIEDTQ 130
>gi|119385419|ref|YP_916475.1| hypothetical protein Pden_2692 [Paracoccus denitrificans PD1222]
gi|119375186|gb|ABL70779.1| Mammalian cell entry related domain protein [Paracoccus
denitrificans PD1222]
Length = 688
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 48/418 (11%), Positives = 114/418 (27%), Gaps = 43/418 (10%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ + I SV GL T + V+F G+ VGR+ L + +
Sbjct: 301 SRALRLTMLIDESVKGLETGADVQFMGLTVGRVTRL--------AARIVQDADDQDRVEQ 352
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
T + + L A
Sbjct: 353 EVTLALTPERLGLS----------------------GDVTPEQALDFMAGQVRGGLRARL 390
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+Q + + + ++ + I T Q +
Sbjct: 391 ASAGFFGTSLQVELVELPDAEPAELDREGRPHPIIPSVPGDISDFSETAQGFLTRVGNLP 450
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE--TTQT 273
+ + ++ + + I ++ + + ++ ++ ++RE
Sbjct: 451 IEEALKSVTDMMNSVTAIASSEDTRAIPGALRGTLEDAQAAAGEIRQVTTELRESGAVGQ 510
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS--AIREITDQRQKIIST 331
+ + + + A + E + + +
Sbjct: 511 LRRMVDEAAAAAEAVKLAAADVPAMVDQIDAAAVKIEAVDYAAIGTEAEGILRDVRALLG 570
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
E + NL+++ + + L++ + + +A N+ A A D ++++ +
Sbjct: 571 TEDAEQLPRNLSETLKSASGLLNDLRDGNAAGSLNNALASASTAAQDVSDAAKRLPQLSA 630
Query: 392 SIGNNLQNFS---------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ S N+ NL+R+++ N F ERNPQ + GR
Sbjct: 631 RLEALAARADAVIAAYGDRSSFNNETINLMREMRRAANAFGSLARTIERNPQAFILGR 688
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 45/433 (10%), Positives = 114/433 (26%), Gaps = 34/433 (7%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRP 89
+ +++ S G++ + V F G+PVGR+ L L +
Sbjct: 167 LTSFGEKGTWIVLAAERS-RGMTEGAPVLFRGLPVGRMQNLRLSETDEGVLTDVFIAAPY 225
Query: 90 DTPLYPSTTATIRTQG----------LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
D L +T + L + + E T+ + +
Sbjct: 226 DELLTTNTVFWDTSGFSVSLGAQGVSLNVNSLASVLQGGAEFATLTSGGAPVENGHVFSL 285
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
P + + S+ + + + + + T LA I
Sbjct: 286 QPDRSAAEANLFADESRALRLTMLIDESVKGLETGADVQFMGLTVGRVTRLAARIVQDAD 345
Query: 200 MMHTTQVTPHSSDSKNTFNTITD-LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ + + D + + L + +
Sbjct: 346 DQDRVEQEVTLALTPERLGLSGDVTPEQALDFMAGQVRGGLRARLASAGFFGTSLQVELV 405
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
++ + + + + +SDFS + T I ++ ++ ++++
Sbjct: 406 ELPDAEPAELDREGRPHPIIPSVPGDISDFSETAQGFLTRVGNLPIEEALKSVTDMMNSV 465
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
I + + ++ + ++ +++ A+ + + +A A
Sbjct: 466 TAIASSEDTRAIP-GALRGTLEDAQAAAGEIRQVTTELRESGAVGQLRRMVDEAAAAAEA 524
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQS--------------------GLNDIQNLVRKLQET 418
+ + + + I G D + L R L ET
Sbjct: 525 VKLAAADVPAMVDQIDAAAVKIEAVDYAAIGTEAEGILRDVRALLGTEDAEQLPRNLSET 584
Query: 419 VNHFDDCLNNFER 431
+ LN+
Sbjct: 585 LKSASGLLNDLRD 597
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 37/491 (7%), Positives = 105/491 (21%), Gaps = 50/491 (10%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGI 63
GL + L I L +I G++ ++++F I
Sbjct: 25 ARAVRAGL-PLIWLVPIVALIVTLGVGWNAIASRGTLISVAFKDATGITPGETALKFREI 83
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + ++ + D Y A +
Sbjct: 84 TVGKVESVRFTED-LQQVEVNMRVDKDLAPYIDKDAQFWIVRPQVSAQGISRLDTVLTGS 142
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + T +++ I ++ + + E
Sbjct: 143 FVEGYWDNQVDGPQTRFQGLDKPPLTSFGEKGTWIVLAAERSRGMTEGAPVLFRGLPVGR 202
Query: 184 ETISTVLANNISHI--------------DKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ + + + S + + + S+ +
Sbjct: 203 MQNLRLSETDEGVLTDVFIAAPYDELLTTNTVFWDTSGFSVSLGAQGVSLNVNSLASVLQ 262
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ S N D + + + + L +
Sbjct: 263 GGAEFATLTSGGAPVENGHVFSLQPDRSAAEANLFADESRALRLTMLIDESVKGLETGAD 322
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ A + +E+T ++ L+ + +
Sbjct: 323 VQFMGLTVGRVTRLAARIVQDADDQDRVEQEVTLALTPERLGLSGDVTPEQALDFMAGQV 382
Query: 350 A-------------------ELMSKINNISALKE-----------NNSLFKDAQRAMHTF 379
EL+ + A + D F
Sbjct: 383 RGGLRARLASAGFFGTSLQVELVELPDAEPAELDREGRPHPIIPSVPGDISDFSETAQGF 442
Query: 380 RDTSEKI--NRYIPSIGNNLQNFSQ-SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ + S+ + + + + + D + + L+ T+ + ++
Sbjct: 443 LTRVGNLPIEEALKSVTDMMNSVTAIASSEDTRAIPGALRGTLEDAQAAAGEIRQVTTEL 502
Query: 437 VWGREKGSVKI 447
G ++
Sbjct: 503 RESGAVGQLRR 513
>gi|229494429|ref|ZP_04388192.1| mce-related protein [Rhodococcus erythropolis SK121]
gi|229318791|gb|EEN84649.1| mce-related protein [Rhodococcus erythropolis SK121]
Length = 412
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 48/134 (35%), Gaps = 3/134 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ Y + F++ + + + + V + + + G++ S V +
Sbjct: 1 MKNRTVYFEIAAFLLIAVVST-TYVLRQVGAGDPFTGTFSVTVEL-ENAAGIAPGSEVAY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + +D + I D + + I + ++LS+
Sbjct: 59 RGVTVGDVESVEVDSAQD-LVVMTLSIAADKQIPNDSHVAISQDTAVPVLKVQLSSQTDG 117
Query: 121 KKTIFQIATERNQR 134
+ + + +R
Sbjct: 118 GPYLVEGSVVPTER 131
>gi|113970203|ref|YP_733996.1| hypothetical protein Shewmr4_1865 [Shewanella sp. MR-4]
gi|113884887|gb|ABI38939.1| Mammalian cell entry related domain protein [Shewanella sp. MR-4]
Length = 554
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/396 (8%), Positives = 98/396 (24%), Gaps = 21/396 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V + G VGR+ + E + + I +Q
Sbjct: 172 AGKLSVGDPVLYEGFRVGRVENTGFNTER-REAFYQLFINK----PYDELVRDNSQFWLT 226
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+ + + + T + + + ++ DS +
Sbjct: 227 SGINMQLSAKGLNLQVGSLETLLTGGVSFGFPEGRLAGAKITEDGSEFRLYDSQELASES 286
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + A+ + + F + +
Sbjct: 287 MYDKYLEFVMLFDESIRGLHDGASVEFRGITIGEVLKSPLTLQQLDPHFGRFSHGTIPVL 346
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I + + + + + + + + ++ T L SD
Sbjct: 347 VKIDLARVFEHAEQVGLDNLRTEIERELQSGLRASLKTGNLLTGALFIDLD----LYSDA 402
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + + T + N + +
Sbjct: 403 KPYQNANFMGYPIFPTKRAGVAEIQKQVGQLITKLNNLPLEKTFTEVNATLQNTASALSQ 462
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
++++ + ++ + +E SL D Q+ + T ++ S ++
Sbjct: 463 WSKVGASLDQVLQQQEVLSLPADMQQTLQTVSSVAKGYGPE------------SSVYVEL 510
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
Q +++LQ + + P ++ G + +
Sbjct: 511 QTSLQQLQTLMKELAPLSRQLNQKPNALILGADLPA 546
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
E ++ S+ GL +SV F GI +G +
Sbjct: 290 KYLEFVMLFDESIRGLHDGASVEFRGITIGEV 321
>gi|257054449|ref|YP_003132281.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584321|gb|ACU95454.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 420
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/292 (13%), Positives = 87/292 (29%), Gaps = 5/292 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + F+V + +++ + + G + S G+ T + V +
Sbjct: 1 MLVRKTKIQLVAFLVVSVLAVAYALVRFTDVEKTFGAGGYTVHLHLTSSGGIFTGAEVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G +G + L L ++ A+ LI PDTP + TI + G Y++L +
Sbjct: 61 RGYNIGEVGRLSLTEDGLA---AELLIEPDTPRVPRELDVTIANRSAVGEQYVDLRPVTD 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
E + +R T P+ ++ +S + + E
Sbjct: 118 EGPYLADGDVIGPERV-STPVPAEDLITDLDSLASSVPTESLRTIVDESYEAFHGTGEHL 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
++T S ++ + + ++N +T + +
Sbjct: 177 QRLMDTTSEFTRVAKEYLPQTVELLDKGSTVLRTQNDLSTYMRSFSEDLAALSQTLKDSD 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
I I V+ + S + + + + L
Sbjct: 237 GDIRNLIDVAPDAATTVSGVLAESGPGLSNVVANLLTTSNVLITRLDGVEQA 288
>gi|269966524|ref|ZP_06180607.1| paraquat-inducible protein B [Vibrio alginolyticus 40B]
gi|269828868|gb|EEZ83119.1| paraquat-inducible protein B [Vibrio alginolyticus 40B]
Length = 548
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/403 (8%), Positives = 114/403 (28%), Gaps = 26/403 (6%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATI 101
+ L V + G VGR+ D + + +P D+ + T +
Sbjct: 162 VLTHREAGKLGVGDPVIYKGFTVGRVEKTSFDVDTRKALYQLFIFKPYDSLVRTRTKFWL 221
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + +++ + + +
Sbjct: 222 NSGVDLQLNAEGFEVKFGSLESMLTGGVTFDTVPGLESGEQLTENM-------------- 267
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ ++I++ + + ++ + + +
Sbjct: 268 --VNFRLYDDIKQLREGMYDDYIEFVMLFDESVRGLKRKAPVEYRGLRIGTVMRVPMRLP 325
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++ + S + + +R T +T +
Sbjct: 326 TPEENFSAKKIPVLVRIELGRVYGDFQSQSLPMLKDKLKNEFAKGLRGTLKTGNLLTG-- 383
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
L D + D MR + ++ + I+ + +E +
Sbjct: 384 -ALYVDADFYPNDEPYVPSKFADLDVFPTMRGGFAQVQRQVNDFLNKINNLP-MEETLDS 441
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
LN + + + ++ ++ + K+ Q R + +++ + + G N
Sbjct: 442 LNSTLKTSEKTLASAERVADSIDKLLNQKETQEIPTDIRQSLQQLQKTLDGYGPN----- 496
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ ++++ +++L+ + F L P +V+G ++ S
Sbjct: 497 STMYSEMEATLKELESVMTEFKPVLKQLNEKPNSLVFGEDEIS 539
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP------NHSLAKALIR 88
E ++ SV GL + V + G+ +G ++ + + P I
Sbjct: 286 DYIEFVMLFDESVRGLKRKAPVEYRGLRIGTVMRVPMRLPTPEENFSAKKIPVLVRIE 343
>gi|226361058|ref|YP_002778836.1| Mce family protein [Rhodococcus opacus B4]
gi|226239543|dbj|BAH49891.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 415
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 49/439 (11%), Positives = 129/439 (29%), Gaps = 44/439 (10%)
Query: 1 MESKNYYTSVGLFVVSILFFSF-FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ + F + + ++ N +V + S G+ T++ V
Sbjct: 1 MRSRLVKVQLVAFAIVAMLGLVYVGAKYVRLDNLLGFGEYDVNAQFKDS-GGIFTNAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ G+PVGR+ L L + + I P + S A + + G Y++L
Sbjct: 60 YRGVPVGRVGDLSLTADG---INVELKISSGGPDIPASAKAVVANRSAIGEQYVDLQPDS 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + Q + T P ++ S + + ++
Sbjct: 117 DQGPFLEQGSVITEADT-STPVPVEQVLMATDGLVRSVPVDSLRTVVTQLGTAFNGKGED 175
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+++ST+ + + + + + + + +++ ++ +
Sbjct: 176 LQTLADSLSTLTKDGLDVLPQTLALIRDSQTVLATQSDQSSAIE---------------- 219
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
S++ + Q+ + D+R +I L+++ + + T+
Sbjct: 220 ---------QFSSDLDAVAAQLRTSDPDLRAIIDKGIPASDEIGQLVNETGPSLTTDLTN 270
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ + + + E + +
Sbjct: 271 LAAVGEKLAPQAIA-------LRPILMFLPAIAASASTVAPGDGTVHQGIVLETNNPPSC 323
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
+ + + +R F DT + + + Q S +G+ +V +T
Sbjct: 324 TIGYEGTQEILAEMKRQDPNFDDTQQDFPFNAKANCDAPQG-SVTGVRSADRIVFADPDT 382
Query: 419 VNHFD----DCLNNFERNP 433
+ +D + NP
Sbjct: 383 IQPWDFKPKVMPDTLNLNP 401
>gi|153833327|ref|ZP_01985994.1| paraquat-inducible protein B [Vibrio harveyi HY01]
gi|148870336|gb|EDL69262.1| paraquat-inducible protein B [Vibrio harveyi HY01]
Length = 548
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 31/404 (7%), Positives = 106/404 (26%), Gaps = 32/404 (7%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATI 101
+ L V + G VGR+ D E + +P D+ + T +
Sbjct: 162 VLTHREAGKLGVGDPVIYKGFTVGRVETTSFDVETRRALYQLFIFKPYDSLVRTKTHFWL 221
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + +++ + + A
Sbjct: 222 TSGVDLQLNAEGFEVKFGSLESLITGGVTFDTVPGLGAGDEVTEDM-------------- 267
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ +++++ + ++ + + +
Sbjct: 268 --LHFRLFDDVKQVREGMYDEYIQFVMMFEESVRGLKRKAPVEYRGLRIGTVMKVPMRMP 325
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + SS +R T +T + +
Sbjct: 326 TPEEDFSAKKIPVLVRIELGRVYENLPSSQLPRFKEKLKEEFAKGLRGTLKTGNLLTGAL 385
Query: 282 ---DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
D + SK + + T+N++
Sbjct: 386 YIDTDFYPDEEPYVPSKFEDYDVFPTKQGGFAQVQRQVNDFLTKLNSLPMEDTLNSLNKT 445
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
N + + + ++ + ++ ++ D ++++ + T +
Sbjct: 446 LKNSEKTLASAERVANSVDRLLNQEDTKAIPADIRKSLEQLQKTLDGY------------ 493
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ + +++++ +++L++ + F L P +V+G ++
Sbjct: 494 GPNSTMYSEMESTLKELEQVMTEFKPVLKQLNEKPNSLVFGEDE 537
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 24/262 (9%), Positives = 75/262 (28%), Gaps = 15/262 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-----FLDQEYPNH---SLAKALIR 88
+ ++ SV GL + V + G+ +G ++ + ++++ L + +
Sbjct: 286 EYIQFVMMFEESVRGLKRKAPVEYRGLRIGTVMKVPMRMPTPEEDFSAKKIPVLVRIELG 345
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
PS+ R + + + + + A + P Y
Sbjct: 346 RVYENLPSSQLP-RFKEKLKEEFAKGLRGTLKTGNLLTGALYIDTD----FYPDEEPYVP 400
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
S E+ + Q + + +E L + + +K + + +
Sbjct: 401 SKFEDYDVFPTKQGGFAQVQRQVNDFLTKLNSLPMEDTLNSLNKTLKNSEKTLASAERVA 460
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+S D + + K ++ + + + ++ + + +
Sbjct: 461 NSVDRLLNQEDTKAIPADIRKSLEQLQKTLDG--YGPNSTMYSEMESTLKELEQVMTEFK 518
Query: 269 ETTQTFQEVGQKIDHLLSDFSS 290
+ E + + +
Sbjct: 519 PVLKQLNEKPNSLVFGEDEVND 540
>gi|291287594|ref|YP_003504410.1| Mammalian cell entry related domain protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290884754|gb|ADD68454.1| Mammalian cell entry related domain protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 335
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/302 (11%), Positives = 91/302 (30%), Gaps = 9/302 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+N VG F+ + I + V+ I S +GLS V ++G
Sbjct: 7 RNLEIKVGFFIFLTIIMIAVMIVGFLVTQDVFTRKVHVVF-IAASGEGLSKSMPVMYSGF 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ ++ + L + A + + + A I+ QG+ G + LS
Sbjct: 66 QLAKVHKIELRDDGMVELRANIPEKYTKWIKADSEAKIQAQGVIGANALVLSGGT----- 120
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + I + E I +I + +I + +
Sbjct: 121 -YSDPDIDDGHTYQLTREKAITDILVKVEPMIDDIRSILSNISGVTTSISEKRPKIEELL 179
Query: 184 ETISTVLANNISHIDKM--MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + + A+ + + + T + I + + + +
Sbjct: 180 DGVGALGADINNKQGSLGYLARTDYLKNEIQQIIDKIKIIENNVEKITIAVNDRVDESQP 239
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+L+N + ++++ + ++ E+ Q + + +D + +
Sbjct: 240 VLQNFDKGLIAVKEGAEKIGDLAKNIDESVTKIQPTLDNTNKITADVAETTTNLIDLREQ 299
Query: 302 EN 303
+
Sbjct: 300 TD 301
>gi|237807053|ref|YP_002891493.1| Mammalian cell entry related domain-containing protein [Tolumonas
auensis DSM 9187]
gi|237499314|gb|ACQ91907.1| Mammalian cell entry related domain protein [Tolumonas auensis DSM
9187]
Length = 545
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 30/399 (7%), Positives = 88/399 (22%), Gaps = 25/399 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LS V + G VGR+ + S D + +T +
Sbjct: 168 LSIGDPVLYRGFTVGRVEQAEFKSDSRQMSYQLFIQAPYDALVTSNTRFWLNRGIQLQAA 227
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ +TI + P G S +
Sbjct: 228 TDGIKIKTGTLETILSGGV-------SFSVPPGWELGQPVKGYRSFNLYADEDSSTIRRY 280
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ A ++ V + + +
Sbjct: 281 QDKVDYILLFDESVRGLNPGAPVEYRGIQVGSVLAVPFSVPGNDLLTARSRQIPVLIRIE 340
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I L N + V+ + ++ ++ +
Sbjct: 341 PGRIRGDMDKDQLPNWEKEFTTAVRQGLRASLRSGNLLTGALYV-----DLNFYPDLPKT 395
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + A + I + + + + +
Sbjct: 396 TGLGELANYRTLPTASGGLARIEQQVVQLLNKLNQLDIEQVLTNAQTMLTETEAAMANVR 455
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
++ + ++ I+ + + L + +R + + T + ++ S ++
Sbjct: 456 QVSASMDKIANQQSSQELPAELKRTLAEMQQTLKGLSA------------SSPAYGELNR 503
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
++ L + P +++ + + +
Sbjct: 504 SIQSLNRVLREVQPMARTLNEKPNALLFQPDTATDPEPR 542
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/253 (10%), Positives = 68/253 (26%), Gaps = 11/253 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-------FLDQEYPNHSLAKALIR 88
+ I+ SV GL+ + V + GI VG ++ + L I
Sbjct: 281 QDKVDYILLFDESVRGLNPGAPVEYRGIQVGSVLAVPFSVPGNDLLTARSRQIPVLIRIE 340
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
P + + Q + + + ++ + +
Sbjct: 341 PG-RIRGDMD---KDQLPNWEKEFTTAVRQGLRASLRSGNLLTGALYVDLNFYPDLPKTT 396
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
E + + ++ IE L + ++ + + V
Sbjct: 397 GLGELANYRTLPTASGGLARIEQQVVQLLNKLNQLDIEQVLTNAQTMLTETEAAMANVRQ 456
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
S+ N + + ++Q+ + L + +S + + +V+
Sbjct: 457 VSASMDKIANQQSSQELPAELKRTLAEMQQTLKGLSASSPAYGELNRSIQSLNRVLREVQ 516
Query: 269 ETTQTFQEVGQKI 281
+T E +
Sbjct: 517 PMARTLNEKPNAL 529
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 38/454 (8%), Positives = 118/454 (25%), Gaps = 38/454 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + ++ + + GP+ + + + +GL + ++ + +G++ + L
Sbjct: 19 LIPIVAACIGLWMVVTTINSQGPLITLEM---DNAEGLEPGKTPIKARSVEIGKVQTVRL 75
Query: 74 DQEYPNHSLAK--ALIRPDTPLYPSTTATI-----------RTQGLAGITYIELSTLRKE 120
H + + + L T + L +Y+EL + +
Sbjct: 76 -GNDLKHVIVTAQMNVEAEPLLREDTRFWVVKPRVGKSGISGLNTLLSGSYLELQPGKSK 134
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T P S ++ + + +
Sbjct: 135 EHKLEF-TVLDTPPVTPTNAPGLRIELSSEQDSALSIGDPVLYRGFTVGRVEQAEFKSDS 193
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + A + + + I
Sbjct: 194 RQMSYQLFIQAPYDALVTSNTRFWLNRGIQLQAATDGIKIKTGTLETILSGGVSFSVPPG 253
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL------------SDF 288
L +F +D+ +T+ ++ + + L
Sbjct: 254 WELGQPVKGYRSFNLYADEDSSTIRRYQDKVDYILLFDESVRGLNPGAPVEYRGIQVGSV 313
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ S + L + + + ++ + +S +
Sbjct: 314 LAVPFSVPGNDLLTARSRQIPVLIRIEPGRIRGDMDKDQLPNWEKEFTTAVRQGLRASLR 373
Query: 349 FAELMS-----KINNISALKENNSLFKDAQ-RAMHTFRDTSEKINRYIPSIGNNLQNFS- 401
L++ +N L + L + A R + T +I + + + N L
Sbjct: 374 SGNLLTGALYVDLNFYPDLPKTTGLGELANYRTLPTASGGLARIEQQVVQLLNKLNQLDI 433
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ L + Q ++ + + + + + ++
Sbjct: 434 EQVLTNAQTMLTETEAAMANVRQVSASMDKIANQ 467
>gi|331699189|ref|YP_004335428.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953878|gb|AEA27575.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
Length = 408
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 41/135 (30%), Gaps = 4/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ + +V L + + G + G+ + + V +
Sbjct: 1 MITRTVRRQLFALLVITLVGVGYVGIRYAGLGTVFGATTYPVTMQLADSGGIFSGADVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ L + + I P + A +R G Y++LS
Sbjct: 61 RGVSVGRVGDLTVTPTG---VDVRLDIDRTAPAIPADLHAAVRDLSAIGEQYVDLSPDST 117
Query: 120 EKKTIFQIATERNQR 134
+ + R
Sbjct: 118 GGPMLGAGSVIPAAR 132
>gi|296167385|ref|ZP_06849787.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897329|gb|EFG76933.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 537
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 43/397 (10%), Positives = 103/397 (25%), Gaps = 13/397 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ +G V+ L + W Y ++ + + L V+ G
Sbjct: 16 TRAT-VVIGSLVIV-LALVAGFVGW----KLYQKLTNNTVVAYFPAANALYPGDKVQIMG 69
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG I + + + S A I L I+L K
Sbjct: 70 LRVGAIDKIEPAGD---KMKVTFHYENKYRVPASANAVILNPTLVASRAIQLEPPYKGGP 126
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ A +R + P + ++ N K+ + + + +A
Sbjct: 127 VLADNAVIPEERTQV---PVEWDQLRNSITNIISKLGPTPEQPTGPFGEVIESYADGLAG 183
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN-TITDLITSLDKMIKAIDLQKVNQ 241
N+S ++ + + + +
Sbjct: 184 KGKEINTTLTNLSQALTALNEGRGDFFAVVKSLALFVNALHKDDQQFVALNQNLADFTTR 243
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ N +N + + + + + + + L
Sbjct: 244 LAHNDSDLANAIQQLDSLLSTVRPFLDKNRSVLTYDINNLATVTNTILQPDPLNGLETAL 303
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + SN+ I S N ++ I S++ S+ + +++
Sbjct: 304 HILPTAASNINQVYHPSHGSVVAIPAITSFANPMQFICSSIQAGSRLGYQESAELCAQYL 363
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+S+ + T+E + + I LQ
Sbjct: 364 APILDSIKFNYLPFGANLFSTAEVLPKEIAYSEPRLQ 400
>gi|228472689|ref|ZP_04057449.1| mammalian cell entry related domain protein [Capnocytophaga
gingivalis ATCC 33624]
gi|228276102|gb|EEK14858.1| mammalian cell entry related domain protein [Capnocytophaga
gingivalis ATCC 33624]
Length = 329
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/346 (10%), Positives = 97/346 (28%), Gaps = 19/346 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + ++ + F +L + + S GL T ++V
Sbjct: 1 MKI-SKEAKTAIIILLGVGSFIFGYNFLKSTPLFSSDK-NYHAVFTHS-GGLQTGTNVTV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLR 118
NG+ VG + + +D + + D ++ A I + G G+ +
Sbjct: 58 NGVTVGAVKKIQIDP-ATAKIIVSFSCKKDFTFSKNSQAEIYSSLLGNTGLQILPALDGA 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + S ++ +N E T+K ++ ++ + L
Sbjct: 117 PQAQ--------PGDTLPSHIQASLMDAIGANLEPTAKNLNKVLSSTDSLMTTFSRTLDA 168
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
S N + +S ++ ++ T ++ D
Sbjct: 169 KAQQDIKESLANLNVTLQQMSRASVSLNNLLASAQAPLHKSLHNVETLSGNFVQLSDSLS 228
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
Q+ + + + + + ++ + L ++ +
Sbjct: 229 KLQVGKLMAHVESTLTQVDGLLKEVQKGGGTVSKLLTDP-----KLYNNLQTATSELGLL 283
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ S + + K+ + I+ + S+ N
Sbjct: 284 MEDIRLNPKRYVHISIFGKKNKEYETPTKVETPISERISEQSSENQ 329
>gi|126462592|ref|YP_001043706.1| hypothetical protein Rsph17029_1827 [Rhodobacter sphaeroides ATCC
17029]
gi|126104256|gb|ABN76934.1| Mammalian cell entry related domain protein [Rhodobacter
sphaeroides ATCC 17029]
Length = 156
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 25/114 (21%), Positives = 43/114 (37%), Gaps = 4/114 (3%)
Query: 22 FFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ + + D + SVDG+S + VR G+ VG + GL L+ +
Sbjct: 19 IGFVVYAGQVAGITRDSGSYPLKASF-RSVDGISVGTDVRLAGVKVGSVTGLALNPQTY- 76
Query: 80 HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ A ++ L + I ++GL G Y+EL + E Q
Sbjct: 77 FADATISVKQGIELPTDSAILISSEGLLGGNYVELVPGGALETLAAGEEIEDTQ 130
>gi|148546242|ref|YP_001266344.1| hypothetical protein Pput_0999 [Pseudomonas putida F1]
gi|148510300|gb|ABQ77160.1| Mammalian cell entry related domain protein [Pseudomonas putida F1]
Length = 160
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 4/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + ++ S +V ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLALRVSGLSASPSSDTYKVYAYF-DNIAGLTVRAKVTM 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 60 AGVTIGKVTAIDLDRDSYTG-RVTLQLDKSVDNLPTDSTASILTAGLLGEKYIGISVG-G 117
Query: 120 EKKTIFQIATERNQR 134
E + AT + +
Sbjct: 118 EDDVLKDGATIHDTQ 132
>gi|257054446|ref|YP_003132278.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584318|gb|ACU95451.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 328
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/277 (13%), Positives = 86/277 (31%), Gaps = 7/277 (2%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
+ + F S+ G GL TD VR G+ VG +
Sbjct: 12 IAIVGITLLFLGTLAALNSDDLPLIGGGTTYRAEFSE-AAGLETDDEVRIAGVKVGEVTD 70
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ LD L + D + TTA I+ + L G Y+ L E
Sbjct: 71 IDLDG---AKVLVSFKV-SDAWIGDETTAAIKIKTLLGRKYLALDPSGDEPLDPNTTIPL 126
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
A + + + +++ S + + N + + + + +S +
Sbjct: 127 ERTTAPYDVLEAFRGLSRTVDDIDVNQLARSFDVLSRTFANTPEDVRGALEGLSELSDTI 186
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
A+ + +++ T+ + ++ + + + + ++ +L + S
Sbjct: 187 ASRDQQLSELLEGTRRISQTLADRDAELAVLLEDGNELLEELSAREEAISAMLTGTRKLS 246
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
D + V E ++ Q+ L++
Sbjct: 247 EQLRGLVDDNEEQLQPVLEKLDQLTDMLQRNQESLAE 283
>gi|255262172|ref|ZP_05341514.1| paraquat-inducible protein B, putative [Thalassiobium sp. R2A62]
gi|255104507|gb|EET47181.1| paraquat-inducible protein B, putative [Thalassiobium sp. R2A62]
Length = 795
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/406 (10%), Positives = 119/406 (29%), Gaps = 22/406 (5%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LDQEYPNHSLA----KALIRPDTPL 93
++ + + GL + V NG+ +G + G+ +D + + +R
Sbjct: 296 QLSVVFDDNASGLIVGAPVELNGVSIGEVTGITGLVDPDTFGDTRVRLLATMALRSSKMG 355
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY---FISN 150
+ T R IF + + P+ I+
Sbjct: 356 LGDQISVSETLDFLEDRVSAGLRARLASANIFTGGLKVEFALLNAPAPASIDRGGIPFPV 415
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
T I+D + + + E I + + + D +
Sbjct: 416 FPTTGSDIADVAATAEGVFERINNLPIEEVLQSAISALDAGTTLLAGDDLNAVPGEILRL 475
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
++ ++ + +S + ++++ V V +
Sbjct: 476 VGDARGVIGSDEVQALPAQIGETATALTSAVTDVQSILSQLEEQDAVNRIVFAVEAVGQA 535
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ E Q++ L+S + + + E I + + ++++ +
Sbjct: 536 ATSADESLQRLPDLISQIDALVATANDLPLEELITEGSRLIQTTNNYFA----------- 584
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ ++ + + L + + L+S IN + + + A +A +D + + I
Sbjct: 585 -LEGVQALPNELKLALAEINTLVSGINAEDGSAKLVTAIEQAGQAASQVQDAASDLPALI 643
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
++ + ++ + + V D + P ++
Sbjct: 644 SNLTQLSERVRDMPVDQVIDEVNTFLSAATRLIDTPDA-RELPAEL 688
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/234 (10%), Positives = 66/234 (28%), Gaps = 11/234 (4%)
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ + L + + Q L N + + + IN + +
Sbjct: 564 PLEELITEGSRLIQTTNNYFALEGVQALPNELKLALAEINTLVSGINAEDGSAKLVTAIE 623
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
+ GQ + S S + + +
Sbjct: 624 QAGQAASQVQDAASDLP--ALISNLTQLSERVRDMPVDQVIDEVNTFLSAATRLIDTPDA 681
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
+ + LND+ + +M ++ + ++ N+ A A + + ++++ + +
Sbjct: 682 RELPAELNDALAELTTIMGELRDGGVIENANTTLAAASDAAKSVQTAADELPALVSRLNR 741
Query: 396 NLQNFSQSGLN---------DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
L + + + +R +Q + ER P ++ GR
Sbjct: 742 VLAQAETTLSGLDEDSTLNYEARTALRDIQAAADAVTSLARAIERRPNSLLTGR 795
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/383 (8%), Positives = 89/383 (23%), Gaps = 4/383 (1%)
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
+GLS + + + GI VGRI + + + + A + + ST +
Sbjct: 174 EGLSDGTPILYKGIEVGRISNSRIAPDGISSIADAFIEAPYNDLINTSTRFWDTSGFTFS 233
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
I + ++ + F + + S +
Sbjct: 234 IGADGADVDFQSLASLLSGGITFDTIISGGEMVEDETIFRLYQDENLARASVFADPDSDA 293
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + I + +T + +
Sbjct: 294 LLQLSVVFDD--NASGLIVGAPVELNGVSIGEVTGITGLVDPDTFGDTRVRLLATMALRS 351
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ D V++ L+ ++ + +++ N +
Sbjct: 352 SKMGLGDQISVSETLDFLEDRVSAGLRARLASANIFTGGLKVEFALLNAPAPASIDRGGI 411
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ S + A + + E Q T +LN +
Sbjct: 412 PFPVFPTTGSDIADVAATAEGVFERINNLPIEEVLQSAISALDAGTTLLAGDDLNAVPGE 471
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN-NLQNFSQSGLND 407
L+ + E +L + + + + N +
Sbjct: 472 ILRLVGDARGVIGSDEVQALPAQIGETATALTSAVTDVQSILSQLEEQDAVNRIVFAVEA 531
Query: 408 IQNLVRKLQETVNHFDDCLNNFE 430
+ E++ D ++ +
Sbjct: 532 VGQAATSADESLQRLPDLISQID 554
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 9/98 (9%), Positives = 28/98 (28%), Gaps = 10/98 (10%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F ++ Y + I G+ + V++
Sbjct: 20 RASIVWIIPFAALLISLVLAW-------QNYSSRGPLIEITF-NDASGVQEGETEVKYRD 71
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ +GR+ + + + + ++ D + A
Sbjct: 72 VTIGRVAKVGFT-DDLSKVIVTVRLKNDVARFADGDAQ 108
>gi|226365589|ref|YP_002783372.1| Mce family protein [Rhodococcus opacus B4]
gi|226244079|dbj|BAH54427.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 395
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 56/131 (42%), Gaps = 3/131 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +++ + LF+V + F + +++ + + P + R+ GL+ +SV +
Sbjct: 1 MMTRHVVAQLVLFLVISVAAILFGLRYVTGPDTFGNP-IHLTARL-DHAAGLAQGASVNY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG+I + +++ L + P T + +TA I T+ GI +++ +
Sbjct: 59 RGVGVGKISSVDVNEAGTGIVL-GIELHPGTQVPAGSTAKITTENAIGIQALDIMPGSAD 117
Query: 121 KKTIFQIATER 131
+
Sbjct: 118 PPYLVDGDLIE 128
>gi|91226896|ref|ZP_01261493.1| paraquat-inducible protein B [Vibrio alginolyticus 12G01]
gi|91188859|gb|EAS75144.1| paraquat-inducible protein B [Vibrio alginolyticus 12G01]
Length = 548
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/403 (8%), Positives = 114/403 (28%), Gaps = 26/403 (6%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATI 101
+ L V + G VGR+ D + + +P D+ + T +
Sbjct: 162 VLTHREAGKLGVGDPVIYKGFTVGRVEKTSFDVDTRKALYQLFIFKPYDSLVRTRTKFWL 221
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + +++ + + +
Sbjct: 222 NSGVDLQLNAEGFEVKFGSLESMLTGGVTFDTVPGLESGEQLTENM-------------- 267
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ ++I++ + + ++ + + +
Sbjct: 268 --VNFRLYDDIKQLREGMYDDYIEFVMLFDESVRGLKRKAPVEYRGLRIGTVMRVPMRLP 325
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++ + S + + +R T +T +
Sbjct: 326 TPEENFSAKKIPVLVRIELGRVYGDFQSQSLPMLKDKLKSEFAKGLRGTLKTGNLLTG-- 383
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
L D + D MR + ++ + I+ + +E +
Sbjct: 384 -ALYVDADFYPNDEPYVPSKFADLDVFPTMRGGFAQVQRQVNDFLNKINNLP-MEETLDS 441
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
LN + + + ++ ++ + K+ Q R + +++ + + G N
Sbjct: 442 LNSTLKTSEKTLASAERVADSIDKLLNQKETQEIPTDIRQSLQQLQKTLDGYGPN----- 496
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ ++++ +++L+ + F L P +V+G ++ S
Sbjct: 497 STMYSEMEATLKELESVMTEFKPVLKQLNEKPNSLVFGEDEIS 539
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
E ++ SV GL + V + G+ +G ++ +
Sbjct: 286 DYIEFVMLFDESVRGLKRKAPVEYRGLRIGTVMRV 320
>gi|21220883|ref|NP_626662.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|10798660|emb|CAC12796.1| putative secreted protein [Streptomyces coelicolor A3(2)]
Length = 351
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/256 (13%), Positives = 71/256 (27%), Gaps = 12/256 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G S GL VR G+ VG++ G+ LD + D +
Sbjct: 44 FGGGTTYSADFSESA-GLDEGDEVRIAGVKVGQVTGVALDG---AKVKVSFEVE-DAWIG 98
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
TTA I + + G Y+ L + + R + T S + + + +
Sbjct: 99 DRTTAAIAIKTVLGDKYLAL-------DPLGSGRQDPGARIPLARTTSPYDVTQAFQDLS 151
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + E I + ++ +T L++ I K S
Sbjct: 152 GTVDDIDTGRLAESFETISDTFKDSPPHVRKAATGLSDLSKSISKRDAKLSELLKGSARF 211
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
L ++ I ++ V D +
Sbjct: 212 TKTLENNKSSFETLIEDGGPLLGELRDRRTAINALLKGSQDLGTELGGLVKDNEKQLGPT 271
Query: 275 QEVGQKIDHLLSDFSS 290
+ ++ +L ++
Sbjct: 272 LKALGRVTSVLEKNNT 287
>gi|126695651|ref|YP_001090537.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9301]
gi|126542694|gb|ABO16936.1| possible ABC transporter [Prochlorococcus marinus str. MIT 9301]
Length = 281
Score = 73.8 bits (178), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 79/283 (27%), Gaps = 6/283 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG ++ + F +WL + + GLS S V +
Sbjct: 1 MRRSLRDSIVGFSLLGGILIFTFFSFWLRGVRLSSKNWY--LFAEFNNASGLSKKSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VG I + E + P+ L A + T G +
Sbjct: 59 RGILVGSIEDIIFTNESIKAKIVL--NNPEIILPRPAFARVVTNSFLGGDVQVALEASDK 116
Query: 121 K--KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
K I + +E +I + I ++ + IE +T+
Sbjct: 117 TILKNIAKPISEECDAKLIVCQGNTITGKQLSSLSNITNRISQLLKETNQENLIENIVTS 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T + ++ + + + N N I I + +
Sbjct: 177 IDQFDRTQENLDELIFLSKQELQRVEPLIKEITIAANHLNNILSTIDDKETLNDIKLTIN 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + ++ + Q +R+ T + +I
Sbjct: 237 AARSISTKIDNMSDDFEKLTQDKELTKSIRDLTIGLSKFLNEI 279
>gi|294996102|ref|ZP_06801793.1| MCE-family protein mce2B [Mycobacterium tuberculosis 210]
Length = 108
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 4/109 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ +G+ + + F+ I + V GL VR
Sbjct: 1 MKTTGTTIKLGIVWLVLSVFTVMIIVVFGQVR--FHHTTGYSAVFTH-VSGLRAGQFVRA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
G+ VG++ + L + L + L +TTA+IR L G
Sbjct: 58 AGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTASIRYLNLIGE 105
>gi|239945577|ref|ZP_04697514.1| putative Mce family protein [Streptomyces roseosporus NRRL 15998]
gi|239992044|ref|ZP_04712708.1| putative Mce family protein [Streptomyces roseosporus NRRL 11379]
gi|291449032|ref|ZP_06588422.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291351979|gb|EFE78883.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 339
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 75/277 (27%), Gaps = 12/277 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
W + S + S GL VR G+ VG + G+ LD
Sbjct: 30 WRADSLPFVDNGTTYSADFTESA-GLDDGDEVRIAGVKVGEVTGVSLDG---AKVRVDFR 85
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
++ D + S+T I + L G Y+ + + + R + T S +
Sbjct: 86 VK-DAWIGDSSTVGIAIKTLLGEKYLAV-------DPLGDAPQDPGSRITASRTTSPYDV 137
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + K E I + ++ + L+ + +
Sbjct: 138 TQAFNGLGETIGEIDTDQLAKSFETISATFKDSPPHVRNAANGLSALSRTVSERDAQLAT 197
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
SS + L +V ++I + Q+ V D
Sbjct: 198 LLSSSKKLTKTLDGKKSSFETLLEDGNLLLGEVQARRDSIHLLLTGTRDLGTQLTGLVKD 257
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ +L + + +
Sbjct: 258 NDKQLGPTLASLGRVTAVLVKNRKSLDKVLATTGSYS 294
>gi|215447830|ref|ZP_03434582.1| MCE-family protein mce4C [Mycobacterium tuberculosis T85]
gi|289759656|ref|ZP_06519034.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|294995733|ref|ZP_06801424.1| MCE-family protein mce4C [Mycobacterium tuberculosis 210]
gi|289715220|gb|EFD79232.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|326905339|gb|EGE52272.1| MCE-family protein mce4C [Mycobacterium tuberculosis W-148]
Length = 357
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 5/103 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F + ++ + S + G++ +SV +G+ VG
Sbjct: 15 LRTGIFGLVLVICVVLIAFGYSGL-PFWPQGKTYDAYFTD-AGGITPGNSVYVSGLKVGA 72
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + L + + + + A IRT + G
Sbjct: 73 VSAVSLAGNS---AKVTFSVDRSIVVGDQSLAAIRTDTILGER 112
>gi|167586173|ref|ZP_02378561.1| Mammalian cell entry related domain protein [Burkholderia ubonensis
Bu]
Length = 531
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/449 (10%), Positives = 129/449 (28%), Gaps = 52/449 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-----------------IRIPGSVDG 51
VG +S L + + + + + S+
Sbjct: 113 RVGATGISGLGTLLSGAFIGADLGRSPQKQTDFTGLETPPAVTADQQGRRYLLHGDSLGS 172
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S V + + VG++VG LD++ P + R +G+
Sbjct: 173 IDIGSPVFYRHLQVGQVVGFSLDKDGTG---VDVQAFVKAPYDKYVSVNTRWWHASGVDL 229
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S+ K + +P G A+N +++ + +
Sbjct: 230 RLDSSGLKLNTQSLATVIVGG---LAFQSPPGQTDAPQAADNAPFRLAPDEADAMRDPDG 286
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + ++ ++ + + + +T + +
Sbjct: 287 TP-----LMVVMRFDQSLRGLSVGAPVDLRGIVLGQVTNFGIEYNEHTRNFSMKVTMALY 341
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + L + + + + +R + ++ +D +
Sbjct: 342 PSRLSRHSDTALPAPDTAGGHELLEHLVLQGLRGQLRTGSLLTGQLYVALDMFPKAPRAS 401
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ ++ T L + ++ ++ I+ I DQ + I +NLN + +
Sbjct: 402 VDARRTPVELPTVPNTLDELQVQIADIARKLDQVP--------FDRIGNNLNGALAHANQ 453
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L ++ + A+ + + T + +D+
Sbjct: 454 LFGHLDE--------QVVPQARDTLAAAQRTFNAAESTLRQ--------DSPMQSDVHEA 497
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++ L T+ + + ER+P+ +++G
Sbjct: 498 MQSLTHTLQSLNALADYLERHPESLLFGN 526
>gi|269961746|ref|ZP_06176106.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833529|gb|EEZ87628.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 548
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/407 (7%), Positives = 107/407 (26%), Gaps = 32/407 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTAT 100
I+ L V + G VGR+ D E + +P D+ + T
Sbjct: 161 IVLTHREAGKLGVGDPVIYKGFTVGRVETTSFDVETRRALYQLFIFKPYDSLVRTKTHFW 220
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + + +++ + +
Sbjct: 221 LSSGVDLQLNAEGFEVKFGSLESLITGGVTFDTLP----------------GQGAGDEVK 264
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
++ +++++ + + ++ + + +
Sbjct: 265 EDMLHFRLFDDVKQVREGMYDDYIQFVMMFEESVRGLKRKAPVEYRGLRIGTVMKVPMRM 324
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ ++ + SS +R T +T +
Sbjct: 325 PTPEEDFSAKKIPVLVRIELGRVYENLPSSELPRFKEKLKEEFAKGLRGTLKTGNLLTGA 384
Query: 281 I---DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
+ D + SK + + T+N++
Sbjct: 385 LYIDTDFYPDEDPYVPSKFEDFDVFPTKQGGFAQVQRQVNDFLSKLNSLPMEDTLNSLNK 444
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
N + + + ++ + + ++ D ++++ + T +
Sbjct: 445 TLKNSEKTLASAERVANSVDRLLNQDDTKAIPSDIRKSLEQLQKTLDGY----------- 493
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + +++++ +++L++ + F L P +V+G ++ S
Sbjct: 494 -GPNSTMYSEMESTLKELEKVMTEFKPVLKQLNEKPNSLVFGEDEVS 539
Score = 46.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 36/113 (31%), Gaps = 9/113 (7%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-----FLDQEYPNH---SLAKALIR 88
+ ++ SV GL + V + G+ +G ++ + ++++ L + +
Sbjct: 286 DYIQFVMMFEESVRGLKRKAPVEYRGLRIGTVMKVPMRMPTPEEDFSAKKIPVLVRIELG 345
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
PS+ R + + + + + A + P
Sbjct: 346 RVYENLPSSELP-RFKEKLKEEFAKGLRGTLKTGNLLTGALYIDTDFYPDEDP 397
>gi|330994623|ref|ZP_08318546.1| putative phospholipid ABC transporter-binding protein mlaD
[Gluconacetobacter sp. SXCC-1]
gi|329758264|gb|EGG74785.1| putative phospholipid ABC transporter-binding protein mlaD
[Gluconacetobacter sp. SXCC-1]
Length = 151
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 41/105 (39%), Gaps = 2/105 (1%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ +L F IY + + + R S +GL + V +G+PVGR++ + LD
Sbjct: 14 LVLLVAGGFCIYARASQSGGSQDRYPMTARFV-SANGLKVGADVDMDGVPVGRVLSIKLD 72
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ + + L T+ I + L T + + +
Sbjct: 73 PTTY-MANVGFTLDRNIALPDDTSLAIGSPTLTADTALLVQAGQS 116
>gi|315224139|ref|ZP_07865979.1| virulence factor Mce family protein [Capnocytophaga ochracea F0287]
gi|314945872|gb|EFS97881.1| virulence factor Mce family protein [Capnocytophaga ochracea F0287]
Length = 316
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + VV+ + + +L + + P S GL T + + NG+
Sbjct: 4 SREIKTAIIVVAGIAAFYIGFNFLKSKS-FFNKTNTYYAYFPHS-GGLKTGTQITVNGVK 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
VG + + L +E D ++ A + L G
Sbjct: 62 VGSVEAVDL-EEKSAKIKITMECADDFKFSKNSVAELYNSLLGGA 105
>gi|15610633|ref|NP_218014.1| MCE-family protein MCE4C [Mycobacterium tuberculosis H37Rv]
gi|15843109|ref|NP_338146.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31794673|ref|NP_857166.1| MCE-family protein MCE4C [Mycobacterium bovis AF2122/97]
gi|148663361|ref|YP_001284884.1| MCE-family protein Mce4C [Mycobacterium tuberculosis H37Ra]
gi|148824704|ref|YP_001289458.1| MCE-family protein mce4C [Mycobacterium tuberculosis F11]
gi|167967135|ref|ZP_02549412.1| MCE-family protein mce4C [Mycobacterium tuberculosis H37Ra]
gi|215405538|ref|ZP_03417719.1| MCE-family protein mce4C [Mycobacterium tuberculosis 02_1987]
gi|215413410|ref|ZP_03422094.1| MCE-family protein mce4C [Mycobacterium tuberculosis 94_M4241A]
gi|215429003|ref|ZP_03426922.1| MCE-family protein mce4C [Mycobacterium tuberculosis T92]
gi|215432465|ref|ZP_03430384.1| MCE-family protein mce4C [Mycobacterium tuberculosis EAS054]
gi|218755274|ref|ZP_03534070.1| MCE-family protein mce4C [Mycobacterium tuberculosis GM 1503]
gi|219559564|ref|ZP_03538640.1| MCE-family protein mce4C [Mycobacterium tuberculosis T17]
gi|253800539|ref|YP_003033540.1| MCE-family protein mce4C [Mycobacterium tuberculosis KZN 1435]
gi|254234083|ref|ZP_04927408.1| MCE-family protein mce4C [Mycobacterium tuberculosis C]
gi|254366843|ref|ZP_04982884.1| MCE-family protein mce4C [Mycobacterium tuberculosis str. Haarlem]
gi|254552599|ref|ZP_05143046.1| MCE-family protein mce4C [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260188549|ref|ZP_05766023.1| MCE-family protein mce4C [Mycobacterium tuberculosis CPHL_A]
gi|260202676|ref|ZP_05770167.1| MCE-family protein mce4C [Mycobacterium tuberculosis T46]
gi|260206864|ref|ZP_05774355.1| MCE-family protein mce4C [Mycobacterium tuberculosis K85]
gi|289445094|ref|ZP_06434838.1| MCE-family protein mce4C [Mycobacterium tuberculosis T46]
gi|289449199|ref|ZP_06438943.1| MCE-family protein mce4C [Mycobacterium tuberculosis CPHL_A]
gi|289555763|ref|ZP_06444973.1| MCE-family protein mce4C [Mycobacterium tuberculosis KZN 605]
gi|289571730|ref|ZP_06451957.1| MCE-family protein mce4C [Mycobacterium tuberculosis T17]
gi|289576231|ref|ZP_06456458.1| MCE-family protein mce4C [Mycobacterium tuberculosis K85]
gi|289747333|ref|ZP_06506711.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289752218|ref|ZP_06511596.1| MCE-family protein mce4C [Mycobacterium tuberculosis T92]
gi|289755627|ref|ZP_06515005.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289763677|ref|ZP_06523055.1| MCE-family protein mce4C [Mycobacterium tuberculosis GM 1503]
gi|297636153|ref|ZP_06953933.1| MCE-family protein mce4C [Mycobacterium tuberculosis KZN 4207]
gi|297733153|ref|ZP_06962271.1| MCE-family protein mce4C [Mycobacterium tuberculosis KZN R506]
gi|298526977|ref|ZP_07014386.1| mce-family protein mce4c [Mycobacterium tuberculosis 94_M4241A]
gi|306777847|ref|ZP_07416184.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu001]
gi|306782578|ref|ZP_07420915.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu002]
gi|306786396|ref|ZP_07424718.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu003]
gi|306790765|ref|ZP_07429087.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu004]
gi|306795295|ref|ZP_07433597.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu005]
gi|306799483|ref|ZP_07437785.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu006]
gi|306805329|ref|ZP_07441997.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu008]
gi|306809515|ref|ZP_07446183.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu007]
gi|306969622|ref|ZP_07482283.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu009]
gi|306973965|ref|ZP_07486626.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu010]
gi|307081673|ref|ZP_07490843.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu011]
gi|307086281|ref|ZP_07495394.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu012]
gi|313660484|ref|ZP_07817364.1| MCE-family protein mce4C [Mycobacterium tuberculosis KZN V2475]
gi|2924434|emb|CAA17734.1| MCE-FAMILY PROTEIN MCE4C [Mycobacterium tuberculosis H37Rv]
gi|13883455|gb|AAK47960.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31620270|emb|CAD95713.1| MCE-FAMILY PROTEIN MCE4C [Mycobacterium bovis AF2122/97]
gi|124599612|gb|EAY58716.1| MCE-family protein mce4C [Mycobacterium tuberculosis C]
gi|134152352|gb|EBA44397.1| MCE-family protein mce4C [Mycobacterium tuberculosis str. Haarlem]
gi|148507513|gb|ABQ75322.1| MCE-family protein Mce4C [Mycobacterium tuberculosis H37Ra]
gi|148723231|gb|ABR07856.1| MCE-family protein mce4C [Mycobacterium tuberculosis F11]
gi|253322042|gb|ACT26645.1| MCE-family protein mce4C [Mycobacterium tuberculosis KZN 1435]
gi|289418013|gb|EFD15253.1| MCE-family protein mce4C [Mycobacterium tuberculosis T46]
gi|289422157|gb|EFD19358.1| MCE-family protein mce4C [Mycobacterium tuberculosis CPHL_A]
gi|289440395|gb|EFD22888.1| MCE-family protein mce4C [Mycobacterium tuberculosis KZN 605]
gi|289540662|gb|EFD45240.1| MCE-family protein mce4C [Mycobacterium tuberculosis K85]
gi|289545484|gb|EFD49132.1| MCE-family protein mce4C [Mycobacterium tuberculosis T17]
gi|289687861|gb|EFD55349.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289692805|gb|EFD60234.1| MCE-family protein mce4C [Mycobacterium tuberculosis T92]
gi|289696214|gb|EFD63643.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289711183|gb|EFD75199.1| MCE-family protein mce4C [Mycobacterium tuberculosis GM 1503]
gi|298496771|gb|EFI32065.1| mce-family protein mce4c [Mycobacterium tuberculosis 94_M4241A]
gi|308213827|gb|EFO73226.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu001]
gi|308324768|gb|EFP13619.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu002]
gi|308329032|gb|EFP17883.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu003]
gi|308332871|gb|EFP21722.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu004]
gi|308336454|gb|EFP25305.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu005]
gi|308340332|gb|EFP29183.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu006]
gi|308344187|gb|EFP33038.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu007]
gi|308348117|gb|EFP36968.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu008]
gi|308352881|gb|EFP41732.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu009]
gi|308356694|gb|EFP45545.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu010]
gi|308360648|gb|EFP49499.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu011]
gi|308364265|gb|EFP53116.1| MCE-family protein mce4C [Mycobacterium tuberculosis SUMu012]
gi|323717839|gb|EGB27030.1| MCE-family protein mce4C [Mycobacterium tuberculosis CDC1551A]
gi|328460270|gb|AEB05693.1| MCE-family protein mce4C [Mycobacterium tuberculosis KZN 4207]
gi|328864236|gb|AEB53201.1| MCE family protein 4C [Mycobacterium tuberculosis]
Length = 357
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 5/103 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F + ++ + S + G++ +SV +G+ VG
Sbjct: 15 LRTGIFGLVLVICVVLIAFGYSGL-PFWPQGKTYDAYFTD-AGGITPGNSVYVSGLKVGA 72
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + L + + + + A IRT + G
Sbjct: 73 VSAVSLAGNS---AKVTFSVDRSIVVGDQSLAAIRTDTILGER 112
>gi|213962123|ref|ZP_03390387.1| secreted MCE family protein [Capnocytophaga sputigena Capno]
gi|213955129|gb|EEB66447.1| secreted MCE family protein [Capnocytophaga sputigena Capno]
Length = 316
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + VV+ + + +L + ++ P S GL T + + NG+
Sbjct: 4 SREIKTAIIVVAGIVAFYVGFNFLKSKSLFNKTNTYY-AYFPHS-GGLKTGTQITVNGVK 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
VG + + L +E D ++ A + L G
Sbjct: 62 VGSVEAVDL-EEKSAKIKITMECSDDFKFSKNSVAELYNSLLGGA 105
>gi|126432881|ref|YP_001068572.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126232681|gb|ABN96081.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 360
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/258 (12%), Positives = 82/258 (31%), Gaps = 7/258 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ GL+ + V+ +G+ VG + + LD +L + L +
Sbjct: 39 SVKYRAVFAE-AGGLAAGNDVKVSGVTVGTVSDVVLD---KGKALVTFSLDGKVRLGSDS 94
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
TA IRT L G + + + + + + T + ++ + A+ +
Sbjct: 95 TAHIRTGTLLGERMLTVEPKGSRRLGPMEAIPVSRTSSPYSLTEAVSDFTANTADTDTAT 154
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
++ S + + I+ + L T + +S L + + ++ ++
Sbjct: 155 LNQSLDILSETIDRLAPQLGPTFDGLTELSRSLNDRDETLGDLLAGAADVTAILSERSQQ 214
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
L + + + +L N S V + ++ T + V
Sbjct: 215 VNTLLLSANDLLAVLEQRRYAIVNLLANTSAMSQQLT---GLVRDNEQELAPTLEKLNSV 271
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ ++ + +
Sbjct: 272 SEMLERNRDNIGKALNGL 289
>gi|26989296|ref|NP_744721.1| hypothetical protein PP_2577 [Pseudomonas putida KT2440]
gi|24984147|gb|AAN68185.1|AE016451_9 PqiB family protein [Pseudomonas putida KT2440]
Length = 546
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/405 (9%), Positives = 92/405 (22%), Gaps = 36/405 (8%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + L SS+ + IPVG +V L + + DT + T
Sbjct: 168 VLVASDLGSLDIGSSIYYRKIPVGEVVSFALQDDGKGVEIGVFVQAPYDTFVTADTRFWN 227
Query: 102 RTQG-LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + + + A P+ + +S
Sbjct: 228 ASGIDMQIGANGLKVDTESLSSILVGGLAFGSPDFAAQAEPAADQARFQLFADRDMALSP 287
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
Q + ++ + + ++ +
Sbjct: 288 PHGQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQSFPVVVDAVI--- 344
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + + R+ TF E G +
Sbjct: 345 ---------------------YPQRLGPVHRKMLAVFKHTEGDMQGARKLIGTFVEHGLR 383
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ + + + + I Q +E I
Sbjct: 384 AQARSGNLITGQMFISLDFYPDAPKVAFDMAADPIMIPTLPGSLEQLQEQLQRVMERIAK 443
Query: 341 NL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + ++ +L + + A+ T N I +
Sbjct: 444 LPLESIAGNLDGSLRELRASLRQFNGQTL-PEVKVALDEVHKTLRTANSAISEDSPQRER 502
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + +L+ D + R+P+ ++ GR K +
Sbjct: 503 --------MGETLDELERMSRSLRDLADYLGRHPESLIRGRPKAA 539
Score = 56.5 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/247 (10%), Positives = 67/247 (27%), Gaps = 6/247 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + +R ++ GLS + V F G+ GR+ + LD + + D +YP
Sbjct: 290 GQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDATRQ---SFPVVVDAVIYP 346
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+ + L + + + + E RA + + +
Sbjct: 347 QRLGPVHRKML--AVFKHTEGDMQGARKLIGTFVEHGLRAQARSGNLITGQMFISLDFYP 404
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ I P + + + ++ + + +
Sbjct: 405 DAPKVAFDMAADPIMIPTLPGSLEQLQEQLQRVMERIAKLPLESIAGNLDGSLRELRASL 464
Query: 216 TFNTITDLITSLDKMIK-AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
L + + L+ N + ++ D++ +R+
Sbjct: 465 RQFNGQTLPEVKVALDEVHKTLRTANSAISEDSPQRERMGETLDELERMSRSLRDLADYL 524
Query: 275 QEVGQKI 281
+ +
Sbjct: 525 GRHPESL 531
>gi|254294264|ref|YP_003060287.1| hypothetical protein Hbal_1905 [Hirschia baltica ATCC 49814]
gi|254042795|gb|ACT59590.1| Mammalian cell entry related domain protein [Hirschia baltica ATCC
49814]
Length = 166
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 41/117 (35%), Gaps = 2/117 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T VG+ VV+ + E+ + G ++G+ + VR
Sbjct: 1 MRDSLFETIVGIAVVAAAGVFLWFSLQ-QSEKTAGNGSYELTAQFTGPINGVLQGTDVRL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG + + LD+ + L TTA I + G +I L
Sbjct: 60 MGVKVGVVTDVELDKARL-VPKITMNVAEGIELDEDTTAKIASDGFLSGPHIALLPG 115
>gi|331001493|ref|ZP_08325111.1| hypothetical protein HMPREF9439_02782 [Parasutterella
excrementihominis YIT 11859]
gi|329568222|gb|EGG50039.1| hypothetical protein HMPREF9439_02782 [Parasutterella
excrementihominis YIT 11859]
Length = 331
Score = 73.8 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 106/316 (33%), Gaps = 23/316 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K Y +GLFVV+ + + SI L + P AE+ S+ GL + V+F
Sbjct: 1 MGVKTNYFRLGLFVVAAIAAAIASILILLGPS-LGKPYAEMETYFQFSISGLEVGAPVKF 59
Query: 61 NGIPVGRIVGL------------FLDQEYPNHSLAKA-------LIRPDTPLYPSTTATI 101
GI VG++ + + E ++ + + Y + I
Sbjct: 60 RGIQVGQVQEILLSTEAYPSSSQEILSETKAVAVVRMRMELAGKEVESHLQDYINHGLRI 119
Query: 102 RTQ--GLAGITYIELSTLRKEKKTIFQIATE-RNQRAMITATPSGINYFISNAENTSKKI 158
+TQ G+ G Y+ + L +K ++ + + + I + PS N + N + +
Sbjct: 120 QTQLAGITGSLYLSVDFLDPKKYPADRVPFDWKPKYLFIPSAPSLSNEIVENVKGFLASL 179
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ + ++ + + + + +
Sbjct: 180 DSLNINKDLQETVPVIQSLIANLERIANGIDPSSFNKLGSSLSNLLNQADNKINQFDINQ 239
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
T + + +L + + + + +N + V N +DV T ++
Sbjct: 240 LNTLIAQLDKSAEQIGNLSQKAETKQLVTNLTNLSRNLNQMVSNNGYDVTVTLMNLSKIA 299
Query: 279 QKIDHLLSDFSSKMKS 294
Q + +L ++ S
Sbjct: 300 QNLKNLTNNISDSASE 315
>gi|302523377|ref|ZP_07275719.1| secreted protein [Streptomyces sp. SPB78]
gi|302432272|gb|EFL04088.1| secreted protein [Streptomyces sp. SPB78]
Length = 447
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 46/388 (11%), Positives = 105/388 (27%), Gaps = 17/388 (4%)
Query: 11 GLFVVSILFFSFFSI------------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
G V L + + L V + V L S V
Sbjct: 14 GAAAVLALCLTLGIVPVPALGFDGIEDLPLPGGADLGPHPYTVTADMKD-VLNLVPRSDV 72
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ N + +GR+ + L + + I D L T A + L G Y++L
Sbjct: 73 KVNDVTIGRVTAISLA-DDGWTARVTLRINGDVRLPSGTGARLEQSSLLGEKYVQLVEPE 131
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKIIENIEKPL 176
+ R + +S ++ + + K + E +
Sbjct: 132 DGGGRLRSGDRIPLSRTARDTEVEEVFGALSLLLNGGGVNQLKSITTELNKAVGGRESQV 191
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAID 235
+T+ ++T+ T L ++ S I + + + K + D + K ++
Sbjct: 192 RSTLRRVDTLVTDLDDHRSEITAALDAVNRLSATLAHRKQDVGAVLDDLAPGLKTLEEQR 251
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + V D++ + + + L +
Sbjct: 252 GSLMTMLRSLDRLQDVAVDTIDRSKADMVADLKALAPSLRSLADAGKDLPDSLQVLLTYP 311
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
T L + N I+A T + + +
Sbjct: 312 FTDEVLNGVHGDYLNAYLHITAADGTTLIPPLAPEDPDDGAGAPGGPTPGGDTLRKSAGE 371
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTS 383
+ ++ + A + ++ S
Sbjct: 372 PSGKKGATDDEASKGTAPQDTASWSTAS 399
>gi|120403837|ref|YP_953666.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956655|gb|ABM13660.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 360
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/340 (11%), Positives = 107/340 (31%), Gaps = 10/340 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ G + + + + L + S GL+ ++V+ +G+
Sbjct: 7 SSLVRAGF--IGAVLIALVIVVGLQPQQLWSMATSVRYQAVFAES-GGLAAGNNVKVSGV 63
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + + LD ++ + PL TTA+I + G + L +E
Sbjct: 64 TVGSVSDVELD---RGTAVVTFSVAGAVPLGGDTTASIGIATVLGERVLVLRPAGRESLG 120
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + + T + + + + + I+ S + IE I L T +
Sbjct: 121 AMGVIPLSRTGSPYSLTDAIGEFTSNTEQTDTAAINQSLDTLSDTIERIAPQLAPTFDGV 180
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+S L + + ++ + + + + + + A+ Q+ I+
Sbjct: 181 TRLSKSLNSRNESLSGLLEAA---SDVTGVLSERSAQVNSLLLNANDLLAVLQQRRYAIV 237
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ + S V + ++ T + V + ++ + ++ +K +
Sbjct: 238 NLLASTTAVAQQLSGMVADNERELAPTLEKLNTVAEMLERNRDNITASLKGLAKYQVTQG 297
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
A + + ++ Q +
Sbjct: 298 EAVNNGFFYNGFASNLLPGPAIQPFLDYALGYRRGVDAGQ 337
>gi|256820939|ref|YP_003142218.1| Mammalian cell entry related domain-containing protein
[Capnocytophaga ochracea DSM 7271]
gi|256582522|gb|ACU93657.1| Mammalian cell entry related domain protein [Capnocytophaga
ochracea DSM 7271]
Length = 316
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + VV+ + + +L + ++ P S GL T + + NG+
Sbjct: 4 SREIKTAIIVVAGIAAFYIGFNFLKSKSLFNKTNTYY-AYFPHS-GGLKTGTQITVNGVK 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
VG + + L +E D ++ A + L G
Sbjct: 62 VGSVEAVDL-EEKSAKIKITMECSDDFKFSKNSVAELYNSLLGGA 105
>gi|254229655|ref|ZP_04923066.1| paraquat-inducible protein B [Vibrio sp. Ex25]
gi|262393801|ref|YP_003285655.1| paraquat-inducible protein B [Vibrio sp. Ex25]
gi|151937854|gb|EDN56701.1| paraquat-inducible protein B [Vibrio sp. Ex25]
gi|262337395|gb|ACY51190.1| paraquat-inducible protein B [Vibrio sp. Ex25]
Length = 548
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/403 (9%), Positives = 116/403 (28%), Gaps = 26/403 (6%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATI 101
+ L V + G VGR+ D + + +P D+ + T +
Sbjct: 162 VLTHREAGKLGVGDPVIYKGFTVGRVEKTSFDVDTRKALYQLFIFKPYDSLVRTRTKFWL 221
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + +++ + S ++
Sbjct: 222 NSGVDLQLNAEGFEVKFGSLESMLTGGVTFDTVP----------------GLESGELLTE 265
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ ++I++ + + ++ + +
Sbjct: 266 DMVNFRLYDDIKQLREGMYDDYIEFVMLFDESVRGLKANAPVEYRGLRIGTVTRVPMRLP 325
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++ + S + + +R T +T +
Sbjct: 326 TPEENFSAKKIPVLVRVELGRVYGDLESQSLSMFKEKLKEEFARGLRGTLKTGNLLTG-- 383
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
L D + D MR + ++ + I+++ +E ++
Sbjct: 384 -ALYIDADFYPNDDQYVPSEFEGLDVFPTMRGGFAQVQRQVNDFLNKINSLP-MEETLNS 441
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
LN + + + ++ ++ + K+ Q R + +++ + + G N
Sbjct: 442 LNSTLKTSEKTLASAERVADSIDKLLNQKETQEIPTDIRQSLQQLQKTLDGYGPN----- 496
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ N+++ +++L+ + F L P +V+G ++ S
Sbjct: 497 STMYNEMEATLKELESVMTEFKPVLKQLNEKPNSLVFGEDEIS 539
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
E ++ SV GL ++ V + G+ +G + +
Sbjct: 286 DYIEFVMLFDESVRGLKANAPVEYRGLRIGTVTRV 320
>gi|269128536|ref|YP_003301906.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268313494|gb|ACY99868.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 493
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 35/315 (11%), Positives = 96/315 (30%), Gaps = 7/315 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ V++++ S ++ ++ + G V + + S G+ T++ V + G+ VGR+
Sbjct: 11 LLAFLVITVVGISVVAVRYIGIGREALGRQYTVYVDLTES-GGVFTNAEVTYRGVTVGRV 69
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLY-PSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L K L+ D + T A + + G YI+L +K
Sbjct: 70 GPMEL---TDTGIRVKLLLDSDHKIPWDGTVAVVANRSAVGEQYIDLQPTKKPGPDGKIS 126
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISD--SSRHIQKIIENIEKPLTTTIANIET 185
P+ + + + SS + Q + +++ +
Sbjct: 127 GPYLGDGGKYDTIPADRTRLPVSTAELLRNVDKLISSVNPQHLRTIVDELDKAFNGSASD 186
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ +L ++ + + T + T + + Q+ +
Sbjct: 187 LQAILDDSNRLLQTAEESYDDTSRLLHNSRTVLDTQRQMGGHIRAFARDLNTLTTQLRRD 246
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + + E + T + + +S++ + L +
Sbjct: 247 DPALRSTLDATVPASAEATELIDELSPTLPVLLANMTVTGQVMTSRIAGLRSLFILYPMT 306
Query: 306 DSTSNMRSSISAIRE 320
+ + + +
Sbjct: 307 VAGAFTVTPGDGTQH 321
>gi|34557287|ref|NP_907102.1| hypothetical protein WS0897 [Wolinella succinogenes DSM 1740]
gi|34483003|emb|CAE10002.1| hypothetical protein WS0897 [Wolinella succinogenes]
Length = 463
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/338 (13%), Positives = 113/338 (33%), Gaps = 8/338 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
VG+FV S + F ++R + + + G+ GL + V+ NG+
Sbjct: 4 SEVKVGIFVFSAIVMLFLMSTQINRFSVGQKSGYPIEALL-GNASGLEMYAKVKVNGVES 62
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + ++L + + A ++ + + + + + G YIEL +
Sbjct: 63 GHVSRVYLYEN---QAYATLFLQEGVKIPVDSKVLLTQESMLGSKYIELIPGASLEVVER 119
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + S + + E ++ +++ + ET
Sbjct: 120 NGVLKNQKIMSSFDQTSD-SINEAAVEFKEFIKEAREVLNEESRQDLTQTFANLRRVTET 178
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
I +LA N S + K + ++ S +S K+ I++
Sbjct: 179 IEAMLAENRSELKKAIEGVRLMASS---LEGAGREFGTTSSKFGTTADTINAKLPHIVDR 235
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + + ++D ++ F G ++ + L D+ S + E +
Sbjct: 236 VDSVVTGADEVIQENKQPLNDALKSVDQFFSNGNRVVNKLDDYLSIVDRSEIEVGMRVEH 295
Query: 306 DSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
+ + +++ + + + I + ++ + +N
Sbjct: 296 LARDSYSKGYASLYYKPNPTRYYMFDIVSTDDYSKEIN 333
>gi|15609106|ref|NP_216485.1| MCE-family protein MCE3D [Mycobacterium tuberculosis H37Rv]
gi|15841444|ref|NP_336481.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|148661778|ref|YP_001283301.1| MCE-family protein Mce3D [Mycobacterium tuberculosis H37Ra]
gi|148823183|ref|YP_001287937.1| MCE-family protein mce3D [Mycobacterium tuberculosis F11]
gi|254232139|ref|ZP_04925466.1| MCE-family protein mce3D [Mycobacterium tuberculosis C]
gi|289443453|ref|ZP_06433197.1| MCE-family protein mce3D [Mycobacterium tuberculosis T46]
gi|289447586|ref|ZP_06437330.1| MCE-family protein mce3D [Mycobacterium tuberculosis CPHL_A]
gi|289554254|ref|ZP_06443464.1| MCE-family protein mce3D [Mycobacterium tuberculosis KZN 605]
gi|289570059|ref|ZP_06450286.1| MCE-family protein mce3D [Mycobacterium tuberculosis T17]
gi|289746092|ref|ZP_06505470.1| MCE-family protein mce3d [Mycobacterium tuberculosis 02_1987]
gi|289754066|ref|ZP_06513444.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289762124|ref|ZP_06521502.1| MCE-family protein mce3D [Mycobacterium tuberculosis GM 1503]
gi|298525463|ref|ZP_07012872.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|308231994|ref|ZP_07414538.2| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu001]
gi|308370877|ref|ZP_07423054.2| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu003]
gi|308403074|ref|ZP_07493708.2| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu012]
gi|2950439|emb|CAA17842.1| MCE-FAMILY PROTEIN MCE3D [Mycobacterium tuberculosis H37Rv]
gi|13881683|gb|AAK46295.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|124601198|gb|EAY60208.1| MCE-family protein mce3D [Mycobacterium tuberculosis C]
gi|148505930|gb|ABQ73739.1| MCE-family protein Mce3D [Mycobacterium tuberculosis H37Ra]
gi|148721710|gb|ABR06335.1| MCE-family protein mce3D [Mycobacterium tuberculosis F11]
gi|289416372|gb|EFD13612.1| MCE-family protein mce3D [Mycobacterium tuberculosis T46]
gi|289420544|gb|EFD17745.1| MCE-family protein mce3D [Mycobacterium tuberculosis CPHL_A]
gi|289438886|gb|EFD21379.1| MCE-family protein mce3D [Mycobacterium tuberculosis KZN 605]
gi|289543813|gb|EFD47461.1| MCE-family protein mce3D [Mycobacterium tuberculosis T17]
gi|289686620|gb|EFD54108.1| MCE-family protein mce3d [Mycobacterium tuberculosis 02_1987]
gi|289694653|gb|EFD62082.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289709630|gb|EFD73646.1| MCE-family protein mce3D [Mycobacterium tuberculosis GM 1503]
gi|298495257|gb|EFI30551.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|308215313|gb|EFO74712.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu001]
gi|308330465|gb|EFP19316.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu003]
gi|308365774|gb|EFP54625.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu012]
gi|326903576|gb|EGE50509.1| MCE-family protein mce3D [Mycobacterium tuberculosis W-148]
gi|328458738|gb|AEB04161.1| MCE-family protein mce3D [Mycobacterium tuberculosis KZN 4207]
Length = 423
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/352 (9%), Positives = 87/352 (24%), Gaps = 14/352 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +K L +L D ++ + +G+ V
Sbjct: 1 MTTKLRRARSVLATALVLVAGVILAM-----RTADAAARTTVVAYFDNSNGVFAGDDVLI 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG+IV + + + A I + L I+L+
Sbjct: 56 RGVPVGKIVKIEPQP---LRAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAG 112
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKP 175
T+ +R ++ + + + +N+
Sbjct: 113 GPTMADGTVIPQERTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQ 172
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
T I +S ++ H + T + + + + + + ++
Sbjct: 173 GATIRDTIIKLSQAISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLL 232
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKS 294
++I + + + + + + + D L + S
Sbjct: 233 ADGPDKIGQAAEDLNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHIS 292
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
NI + + + A + + + I +
Sbjct: 293 PTVLQNFNNIFEPANGALTGALAGNNMANPIAFLCGAIQAASRLGGEQAAKL 344
>gi|302523965|ref|ZP_07276307.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302432860|gb|EFL04676.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 420
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 23/136 (16%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQ-YDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F + + +++ + + V +++ S G+ T++ V
Sbjct: 1 MLLRRTKIQLVVFAIISVVAIVYALIRFAGLGTVFGSSGYTVKLQLNES-GGIFTNAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ G VGR+ L L Q A I P P + A + + G Y++L
Sbjct: 60 YRGFNVGRVGQLRLTQTG---LEADLNIDPSAPRVPADLDAVVANRSAVGEQYVDLRPKN 116
Query: 119 KEKKTIFQIATERNQR 134
+ + + R
Sbjct: 117 DQGPYLASGSVIPAAR 132
>gi|303256381|ref|ZP_07342395.1| putative ABC-type transport system, periplasmic component
[Burkholderiales bacterium 1_1_47]
gi|302859872|gb|EFL82949.1| putative ABC-type transport system, periplasmic component
[Burkholderiales bacterium 1_1_47]
Length = 331
Score = 73.4 bits (177), Expect = 6e-11, Method: Composition-based stats.
Identities = 49/316 (15%), Positives = 106/316 (33%), Gaps = 23/316 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K Y +GLFVV+ + + SI L + P AE+ S+ GL + V+F
Sbjct: 1 MGVKTNYFRLGLFVVAAIAAAIASILILLGPS-LGKPYAEMETYFQFSISGLEVGAPVKF 59
Query: 61 NGIPVGRIVGL------------FLDQEYPNHSLAKA-------LIRPDTPLYPSTTATI 101
GI VG++ + + E ++ + + Y + I
Sbjct: 60 RGIQVGQVQEILLSTEAYPSSSQEILSETKAVAVVRMRMELAGKEVESHLQDYINHGLRI 119
Query: 102 RTQ--GLAGITYIELSTLRKEKKTIFQIATE-RNQRAMITATPSGINYFISNAENTSKKI 158
+TQ G+ G Y+ + L +K ++ + + + I + PS N + N + +
Sbjct: 120 QTQLAGITGSLYLSVDFLDPKKYPADRVPFDWKPKYLFIPSAPSLSNEIVENVKGFLASL 179
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ + ++ + + + + +
Sbjct: 180 DSLNINKDLQETVPVIQSLIANLERIANGIDPSSFNKLGSSLSNLLNQADNKINQFDINQ 239
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
T + + +L + + + + +N + V N +DV T ++
Sbjct: 240 LNTLIAQLDKSAEQIGNLSQKAETKQLVTNLTNLSRNLNQMVSNNGYDVTVTLMNLSKIA 299
Query: 279 QKIDHLLSDFSSKMKS 294
Q + +L ++ S
Sbjct: 300 QNLKNLTNNISGSASE 315
>gi|108797257|ref|YP_637454.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866342|ref|YP_936294.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108767676|gb|ABG06398.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692431|gb|ABL89504.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 360
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/258 (12%), Positives = 81/258 (31%), Gaps = 7/258 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ GL+ + V+ +G+ VG + + LD +L + L +
Sbjct: 39 SVKYRAVFAE-AGGLAAGNDVKVSGVTVGTVSDVVLD---KGKALVTFSLDGKVRLGSDS 94
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
TA IRT L G + + + + + + T + ++ + A+ +
Sbjct: 95 TAHIRTGTLLGERMLTVEPKGSRRLGPMEAIPVSRTSSPYSLTEAVSDFTANTADTDTAT 154
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
++ S + + I+ + L T + +S L + + ++ ++
Sbjct: 155 LNQSLDILSETIDRLAPQLGPTFDGLTELSRSLNDRDETLGDLLAGAADVTAILSERSQQ 214
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
L + + + +L N S V + ++ + V
Sbjct: 215 VNTLLLSANDLLAVLEQRRYAIVNLLANTSAMSQQLT---GLVRDNEQELAPALEKLNSV 271
Query: 278 GQKIDHLLSDFSSKMKSK 295
+ ++ + +
Sbjct: 272 SEMLERNRDNIGKALNGL 289
>gi|88607977|ref|YP_506411.1| mce-related protein [Neorickettsia sennetsu str. Miyayama]
gi|88600146|gb|ABD45614.1| mce-related protein [Neorickettsia sennetsu str. Miyayama]
Length = 145
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 36/121 (29%), Gaps = 2/121 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+ +L + ++ S + + I GLS S V +G+ GRI L +
Sbjct: 9 TLVLLVSALIFVFLSSNFSLLKRGGCYELNAIFDDALGLSIGSDVLLSGVKAGRITKLSI 68
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + I L + A I + T + + T
Sbjct: 69 GE--SFRVHVRMCIDEGVRLPRDSVAVISAGNIFSTTKNINIDPGISSEILPPGGTFETT 126
Query: 134 R 134
R
Sbjct: 127 R 127
>gi|254497754|ref|ZP_05110527.1| toluene tolerance protein Ttg2C [Legionella drancourtii LLAP12]
gi|254353047|gb|EET11809.1| toluene tolerance protein Ttg2C [Legionella drancourtii LLAP12]
Length = 134
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 39/112 (34%), Gaps = 2/112 (1%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+S + + + + GL + V G+ +G + + L ++
Sbjct: 1 MAMKVSNISDLMSAKSYNVTADFTDIGGLKVRAPVTVAGVKIGEVTHIELQP-GELNAKV 59
Query: 84 KALIRPDTPLY-PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
++ D + ++A I TQGL G YI + +++ +
Sbjct: 60 TMRLQSDKKIPYEDSSARILTQGLLGSNYISIVPGFDDEENKAHPYLQNGDV 111
>gi|149201010|ref|ZP_01877985.1| hypothetical protein RTM1035_15332 [Roseovarius sp. TM1035]
gi|149145343|gb|EDM33369.1| hypothetical protein RTM1035_15332 [Roseovarius sp. TM1035]
Length = 153
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 2/101 (1%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+ ++ S DG+S + VR G+ VGR+ + LD E
Sbjct: 21 FLIYAGKTTGMTTGSAREYQLSASF-RSADGVSVGTDVRLAGVKVGRVTQIALDPETYR- 78
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ ++ + + I ++GL G Y+E+
Sbjct: 79 AKTTFTVQEGINVPDDSAVAISSEGLLGGNYVEIMPGGSPF 119
>gi|118466487|ref|YP_884132.1| mce-family protein mce1d [Mycobacterium avium 104]
gi|118167774|gb|ABK68671.1| mce-family protein mce1d [Mycobacterium avium 104]
Length = 537
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/407 (10%), Positives = 111/407 (27%), Gaps = 42/407 (10%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G V+ L + W Y+ ++ + + L V+ G+ VG
Sbjct: 20 VILGALVIV-LALVVGYVGW----RLYEKLTNNTVVAYFPAANALYPGDKVQIMGLRVGA 74
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I + + + + + +A I L I+L K +
Sbjct: 75 IDKIEPSGD---KMKVTFHYQNKYRVPANASAVILNPTLVASRAIQLEPPYKGGPVLADN 131
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
A +R + P + ++ N K+ ++ + + + +
Sbjct: 132 AVIPEERTQV---PVEWDQLRNSITNIISKLGPTAEQPKGPFGEVIESFADGL------- 181
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
A + + + + +L D Q+ + +N+
Sbjct: 182 ---AGKGKQFNTTLTNLSRALTALNEGRGDFFAVVRSLALFVNALHQDDQQFVALNQNLA 238
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL----LSDFSSKMKSKETSAFLEN 303
+ S + N + T + K + + + + + L
Sbjct: 239 DFTTRLAHSDGDLANAIEQFDSLLTTVRPWLDKNRGVLTYDVKNLETATNALLQPDPLNG 298
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ + + ++ + I +I + I +I N + + + +
Sbjct: 299 LETALHVLPTAAANINQIYHPSHGSVVAIPSITNFANPMQFICSAIQA-----GSRLGYQ 353
Query: 364 ENNSLFKD-AQRAMHTFR-----------DTSEKINRYIPSIGNNLQ 398
E+ L + + T+E + + + LQ
Sbjct: 354 ESAELCAQYLAPILDAIKFNYPPFGLNLFSTAETLPKEVAYSEPRLQ 400
>gi|308373286|ref|ZP_07431725.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu005]
gi|308338201|gb|EFP27052.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu005]
Length = 386
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|241767741|ref|ZP_04765356.1| Mammalian cell entry related domain protein [Acidovorax delafieldii
2AN]
gi|241361259|gb|EER57840.1| Mammalian cell entry related domain protein [Acidovorax delafieldii
2AN]
Length = 325
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 56/128 (43%), Gaps = 3/128 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME+K++ + G+ +L + + + E + V GL ++VR+
Sbjct: 1 MENKSHALAAGV---FVLVVAALLAALAVWLTRDNSSYQEYELTSKDGVTGLQPQAAVRY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + D + + L + + P+ PST A + QG+ G+ ++ L +
Sbjct: 58 KGVAVGKVTRIGFDPQVAGNVLIRIAVNDQAPITPSTFAVLGYQGVTGLAHVLLDDAGEV 117
Query: 121 KKTIFQIA 128
+ + +
Sbjct: 118 QPELPRGP 125
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 19/189 (10%), Positives = 52/189 (27%), Gaps = 12/189 (6%)
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
S + E ++I+ LL D + K S + T+
Sbjct: 129 PRLPLRSSPLSRLAEQGPAILGQVDEATRRINQLLGDENQKRFSTALDNLGQAAGGVTTL 188
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + ++E ++ + + + + + + S ++ ++A
Sbjct: 189 TQRLDATVKE------RLDPALAALPPLAGDARQTLHALQQAGSSVSTLAAD------IG 236
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ + +++ ++ F S L +
Sbjct: 237 QTNKRLSAEGGAIDQLTLGSQALVRAADRFGSSTLPRVNRAAEDTSRAARQLGRTAGGVS 296
Query: 431 RNPQDIVWG 439
NPQ ++G
Sbjct: 297 ENPQLFIYG 305
>gi|325104154|ref|YP_004273808.1| Mammalian cell entry related domain protein [Pedobacter saltans DSM
12145]
gi|324973002|gb|ADY51986.1| Mammalian cell entry related domain protein [Pedobacter saltans DSM
12145]
Length = 314
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/302 (15%), Positives = 89/302 (29%), Gaps = 17/302 (5%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ T VG+ + +L ++ + I VDGL+ V NG
Sbjct: 4 SNETKVGILASFAIAIFIIGYNFLKGNDVFTQEKDFYAIY--DKVDGLTVSKPVLVNGYQ 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+GR+ L L Q LA I P + +T A + + L G +
Sbjct: 62 IGRVAALTLQQN--GKILANFKIAPKYDIPKNTIARLESTDLLGSKAVVFDLGNSTAYAA 119
Query: 125 -------FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
A +Q + + + + + I + + T
Sbjct: 120 DGDTLNSNIQANILDQMEPVQKKAQILISRLDSVLVSVNNILNPNFQKNIESSFNSIAGT 179
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ + + S++ KN IT ++T+ +K+ I
Sbjct: 180 LQTLESTSKTVDGMVTVQSKRIDNILANAESISANLKNNNEQITGILTNFNKVSDEIAKA 239
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVH------DVRETTQTFQEVGQKIDHLLSDFSSK 291
Q LEN + + + ++V + + +D L+ D +
Sbjct: 240 NFKQTLENANQAVADLQTAINKVNKGNGSLALLLNDDKLYNNLNNASHNLDKLMIDLRAN 299
Query: 292 MK 293
K
Sbjct: 300 PK 301
>gi|239931485|ref|ZP_04688438.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291439861|ref|ZP_06579251.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291342756|gb|EFE69712.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 425
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 7/139 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F++ + + + +Y G V +R+P + GL T S V
Sbjct: 1 MITLAVRLKNLAFLLVAVLALSYLGLRYADLGRYVGVADHYTVDVRLPRT-GGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + +A+ I+ P + T A + G YI+L
Sbjct: 60 TYRGVSVGRVGPIGLTADG---VVAELRIKKSAPRIPADTRAVVAGLSAVGEQYIDLRPE 116
Query: 118 RKEKKTIFQIATERNQRAM 136
+ + A
Sbjct: 117 SDGGPYLAEGARIEQADTQ 135
>gi|193213349|ref|YP_001999302.1| Mammalian cell entry related domain-containing protein
[Chlorobaculum parvum NCIB 8327]
gi|193086826|gb|ACF12102.1| Mammalian cell entry related domain protein [Chlorobaculum parvum
NCIB 8327]
Length = 292
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 23/119 (19%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E K G+F + L F+ + + R+ + + I + +V+GL+ ++ V
Sbjct: 6 ELKWSDLKTGIFFLLGLGFAAYLGLVIGRNTSVFTGVTTIKI-MTENVNGLAENNFVAVA 64
Query: 62 GIPVGRIVGLFLDQEYPN-HSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTL 117
G +G + L E + +A ++ + + + A+IR+ G+ G Y+++
Sbjct: 65 GKKIGTVSSLNFATENDSLFVVANLKLQNEYANLVTKDSKASIRSLGVLGDKYVDIKAG 123
>gi|121639416|ref|YP_979640.1| Mce-family protein mce4C [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224991912|ref|YP_002646601.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121495064|emb|CAL73550.1| Mce-family protein mce4C [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224775027|dbj|BAH27833.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length = 357
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 5/103 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F + ++ + S + G++ +SV +G+ VG
Sbjct: 15 LRTGIFGLVLVICVVLIAFGYSGL-PFWPQGKPYDAYFTD-AGGITPGNSVYVSGLKVGA 72
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + L + + + + A IRT + G
Sbjct: 73 VSAVSLAGNS---AKVTFSVDRSIVVGDQSLAAIRTDTILGER 112
>gi|111018963|ref|YP_701935.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110818493|gb|ABG93777.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 415
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 48/133 (36%), Gaps = 6/133 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSF-FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ + F + + ++ N +V + S G+ T++ V
Sbjct: 1 MRSRLVRIQLVAFAIVAMLGLVYVGAKYVRLDNLLGFGEYDVNAQFKDS-GGIFTNAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ G+PVGR+ L L + + I P + S A + + G Y++L
Sbjct: 60 YRGVPVGRVGDLSLTADG---INVELKISSGGPDIPASAKAVVANRSAIGEQYVDLQPDS 116
Query: 119 KEKKTIFQIATER 131
+ + Q +
Sbjct: 117 DQGPFLEQGSVIT 129
>gi|289208498|ref|YP_003460564.1| hypothetical protein TK90_1320 [Thioalkalivibrio sp. K90mix]
gi|288944129|gb|ADC71828.1| Mammalian cell entry related domain protein [Thioalkalivibrio sp.
K90mix]
Length = 337
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/322 (14%), Positives = 98/322 (30%), Gaps = 33/322 (10%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ + +GLF+V L +++ ++ + + I SV GL + V+F
Sbjct: 1 MSARQH-FRLGLFIVGGLVALVTALFIMT-AGNIFRASIPIETYIDSSVQGLEIGAPVKF 58
Query: 61 NGIPVGRIVGLFLD----------QEYPNHSLAKALIRPDTP-----------------L 93
G+ +G I L +E + + +A + PD +
Sbjct: 59 RGVTIGEITNLGFTSVEYQQDVDPRERKRYVMVEARLWPDRFAASAREQDFEADVLKNLV 118
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
I QG+ G+ Y+E ++ + E + I ++PS F+ AEN
Sbjct: 119 DAGLRVRIAAQGITGMNYLEADFSDPDEHPPLEHDWEP-RSIYIPSSPSIAVQFMEYAEN 177
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
K+I N + + I ++ T + S
Sbjct: 178 LLKRIDGLDIEGVIENLNSLLVTVDDTVSSLDTGGLNQRADDLISELEQTMRTADRVMQS 237
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
D + KAI + ++ + +++ +
Sbjct: 238 VEALVEHPDTQALPSETRKAIQELRRTAEAADVAGLVDRMDSMVERLDRGMDVSES---K 294
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
E ++ +S S
Sbjct: 295 LLETLDELQGAISGLRSLSDDV 316
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/275 (9%), Positives = 83/275 (30%), Gaps = 13/275 (4%)
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + M+ + S + D++ +L + +
Sbjct: 67 TNLGFTSVEYQQDVDPRERKRYVMVEARLWPDRFAASAREQDFEADVLKNLVDAGLRVRI 126
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
N + + + + + + + + ++ +
Sbjct: 127 AAQGITGMNYLEADFSDPDEHPPLEHDWEPRSIYIPSSPSIAVQFMEYAENLLKRIDGLD 186
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+EN+ + ++S++ ++ +++ S L + + +M +
Sbjct: 187 IEGVIENLNSLLVTVDDTVSSLDTGGLNQR--------ADDLISELEQTMRTADRVMQSV 238
Query: 357 NNISALKENNSLFKDAQRAMHTFRDTSEKIN-----RYIPSIGNNLQNFSQSGLNDIQNL 411
+ + +L + ++A+ R T+E + + S+ L + +
Sbjct: 239 EALVEHPDTQALPSETRKAIQELRRTAEAADVAGLVDRMDSMVERLDRGMDVSESKLLET 298
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ +LQ ++ ++ RNP ++G +
Sbjct: 299 LDELQGAISGLRSLSDDVRRNPGGALFGAPPPRSR 333
>gi|120406147|ref|YP_955976.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958965|gb|ABM15970.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 453
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/355 (10%), Positives = 86/355 (24%), Gaps = 24/355 (6%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ ++ + L V+ + W +R+ + S GL VR
Sbjct: 1 MK-RSRWLRTALVGVLVATLAIGAYLVWPNRAGHK-------VTAYFTSAVGLYPGDDVR 52
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+PVG I + I D + A + L +I+L+
Sbjct: 53 VVGVPVGTIDSIEP---RAGDVKITMTIDGDVKVPAEAKALVIAPNLVSARFIQLAPAYT 109
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A R A P + S ++ +Q + ++ T
Sbjct: 110 GGTVMADGAEIGLDRT---AVPVEWDEVKEQLTQLSTQLGPHEGSVQGPLTDVVNQAADT 166
Query: 180 IANIETISTVLANNISHIDKMMHT--------TQVTPHSSDSKNTFNTITDLITSLDKMI 231
+S + + D+ + N ++ +
Sbjct: 167 FDGNGDTFRRAVRELSQTAGRLGDSRTDLFGTIRNLQILVDALSNSNEQIVQFSNHVASV 226
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS- 290
+ + + + + + + + + D
Sbjct: 227 SQVLADATTDLDVTLGTLNQALTDVRGFLGESNEALIGQVNKLTDFTNILTAQSDDIEQI 286
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + NI + + + + Q I T N +
Sbjct: 287 LHITPNGLSNFYNIYNPAQGTVGGLLTLPNFGNPVQFICGGTFDAAATTDNYKRA 341
>gi|308377881|ref|ZP_07480745.2| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu009]
gi|308354318|gb|EFP43169.1| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu009]
Length = 384
Score = 73.4 bits (177), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|322434412|ref|YP_004216624.1| Mammalian cell entry related domain protein [Acidobacterium sp.
MP5ACTX9]
gi|321162139|gb|ADW67844.1| Mammalian cell entry related domain protein [Acidobacterium sp.
MP5ACTX9]
Length = 361
Score = 73.4 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 31/323 (9%), Positives = 94/323 (29%), Gaps = 13/323 (4%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVII-RIPGSVDGLSTDSSVRF 60
E + +G+ V+ ++ ++ S+ ++ + + G+ ++V
Sbjct: 6 EVRWSQLKIGVIVLVAAVILVTLLFLMTSSSGLGVLSKKLTVSVYFENAAGIKEGAAVNL 65
Query: 61 NGIPVGRIVGLFLDQEYPNH---SLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELS 115
G+ +G + + + + + L +TA + T G+ G T ++++
Sbjct: 66 QGVTIGAVKSVSVTADPARKLTPVRVVMKLDSKYQSELKEDSTAALTTVGVLGDTVVDIN 125
Query: 116 TLRKEKKTIFQIA-----TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + + ++ A+ I + + + + +
Sbjct: 126 SQVAHGAPLKDGDELHTLETPSITDVVKASQGTIEQLNVILAKMNTIVDNLQSGKGSVGQ 185
Query: 171 NIEKP--LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
I P A +E + T+ N + + + + + + TSL
Sbjct: 186 LINNPDLYNKANATVEELHTLEVNLNNGKGSIGKLVTDDTMYNRLNDAAGKLDQIATSLQ 245
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ L N ++ + + Q++ LS+
Sbjct: 246 GGHGTAGKLLYDETLYNNLNATLTKTNALLGDVQNGKGAAGMLINDPAFAQQLRDTLSNT 305
Query: 289 SSKMKSKETSAFLENIADSTSNM 311
++ + +
Sbjct: 306 NAIVAGVNQGKGTLGKLANDDQA 328
>gi|78778676|ref|YP_396788.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9312]
gi|78712175|gb|ABB49352.1| putative ABC transporter [Prochlorococcus marinus str. MIT 9312]
Length = 281
Score = 73.4 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG ++ + F +WL + + + GLS S V +
Sbjct: 1 MRRSLRDSIVGFSLLGGILTFTFFSFWLKGV-RLSSKNWHLFAEF-NNASGLSKKSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI--TYIELSTLR 118
GI VG I + L + P+ L A + T G ++ +
Sbjct: 59 RGILVGSIDDI-LFTNESIQAKIVLN-NPEIILPKPAFARVVTNSFLGGDVQVALETSEK 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
K I + +E+ +I I ++ + IE + +
Sbjct: 117 TISKNIAKPTSEKCDSKLIICQGDTITGKQLSSLSNITNRLSQLLKESNQENIIENIVKS 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T + +++ + + + N N I I + + +
Sbjct: 177 IDQFDRTQENLDELIYLSKQEILRIEPLINEITIAANHLNKILSTIDNEETLNDIKLTIN 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++ + +R+ T + +I
Sbjct: 237 AASSISSKMDDVSDDFVKLTKDKELTKSIRDLTIGLSKFLNEI 279
>gi|123967849|ref|YP_001008707.1| putative ABC transporter [Prochlorococcus marinus str. AS9601]
gi|123197959|gb|ABM69600.1| possible ABC transporter [Prochlorococcus marinus str. AS9601]
Length = 281
Score = 73.4 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 79/283 (27%), Gaps = 6/283 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG ++ + F +WL + + GLS S V +
Sbjct: 1 MRRSLRDSIVGFSLLGGILTFTFFSFWLRGVRLSTKNWY--LFAEFNNASGLSKKSPVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI--TYIELSTLR 118
GI VG I + L + P+ L A + T G ++ +
Sbjct: 59 RGILVGSIEDI-LFTNESIKAKIVLN-NPEIILPRPAFARVVTNSFLGGDVQVALETSDK 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
K I + +E+ +I I ++ + IE + +
Sbjct: 117 TIPKNIAKPISEKCNTKLIICQGDTITGKQLSSLSNITNKISQLLKDTNQENLIENIVNS 176
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
T + ++ + + + N N I I + +
Sbjct: 177 IDQFDRTQENLDELIYLSKKELERVEPLIKEITIAANHLNNILSTIDDKETLNDIKLTIN 236
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++ + Q +R+ T + +I
Sbjct: 237 AARSISTKIDGMSDDFEKLTQDKELTKSIRDLTIGLSKFLNEI 279
>gi|70728305|ref|YP_258054.1| toluene tolerance ABC transporter periplasmic substrate-binding
protein [Pseudomonas fluorescens Pf-5]
gi|68342604|gb|AAY90210.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Pseudomonas fluorescens Pf-5]
Length = 155
Score = 73.4 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 52/134 (38%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLSPTASTDTYKLYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +G++ + LD++ + L +TA+I T GL G YI +S +
Sbjct: 61 AGVTIGKVTAIDLDRDSFTG-RVTMQLEKRVDNLPTDSTASILTAGLLGEKYIGISVGGE 119
Query: 120 EKKTIFQIATERNQ 133
E Q
Sbjct: 120 EALLKDGGTIHDTQ 133
>gi|294086100|ref|YP_003552860.1| ABC transporter [Candidatus Puniceispirillum marinum IMCC1322]
gi|292665675|gb|ADE40776.1| ABC-type transport system [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 356
Score = 73.4 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/356 (9%), Positives = 105/356 (29%), Gaps = 11/356 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K G+FV+ F + +V GL + + V +
Sbjct: 1 MRLKQADLMAGIFVLGGAFLIVTIFVIVRGQLGLYDRYH----AFFSNVAGLRSGAVVVY 56
Query: 61 NGIPVGRIVGLF-LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G VG + + + + I + + A I L I++
Sbjct: 57 EGYTVGSVDSIEPISSDKGMRFRINLDITSGWHIPQDSVAEISAISLLSANAIQIKAGSG 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
E+ + + ++ + A+++ + + + + ++
Sbjct: 117 ERLPVGSEIASMDAVNVMAEISRTADKLTMIAQSSLAPL------LDTVRDILDSEGREA 170
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + +++ ++ I M + S + +IT + ++++ +
Sbjct: 171 LKGMTGLTSQISQQAPEIMTNMQQASQNIANVASASNSASITRTLDNMERTSQVTLGISQ 230
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ + ++ T + + I+++ + ++ +
Sbjct: 231 RTNRIVSDMNMARINAALAHFEQASAALQSTLEIANRAVRNIENITDNQNATHITSVLDD 290
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
E +A + +S + I D + + N++ + ++ +
Sbjct: 291 ISETVATMNEIVSTSSHTSKVIQDISLASSDRVESFLLRMENVSLNLEEMTARIRD 346
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 19/201 (9%), Positives = 69/201 (34%), Gaps = 9/201 (4%)
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + ++ + + + Q+ +++ +S S + L+N+
Sbjct: 160 RDILDSEGREALKGMTGLTSQISQQAPEIMTNMQQASQNIANVASASNSASITRTLDNME 219
Query: 306 DSTSNMR--SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
++ S + +I + + E ++ L + + + I NI+ +
Sbjct: 220 RTSQVTLGISQRTNRIVSDMNMARINAALAHFEQASAALQSTLEIANRAVRNIENITDNQ 279
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPS---IGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ +T +N + + +Q+ S + + +++ + +++
Sbjct: 280 NAT----HITSVLDDISETVATMNEIVSTSSHTSKVIQDISLASSDRVESFLLRMENVSL 335
Query: 421 HFDDCLNNFERNPQDIVWGRE 441
+ ++ NP ++ G +
Sbjct: 336 NLEEMTARIRDNPSLLIMGSQ 356
>gi|21220880|ref|NP_626659.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|10798657|emb|CAC12793.1| putative secreted protein [Streptomyces coelicolor A3(2)]
Length = 433
Score = 73.0 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 7/137 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F++ + F + +Y G V + +P + GL T S V
Sbjct: 1 MITLAVRLKNLAFLLIAVLALSFLGIRYADLGRYVGVADYYTVDVHLPRT-GGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L E +A+ I+ P + T A + G YI+L
Sbjct: 60 TYRGVSVGRVGPIDLTAEG---VVAELRIKKSAPRIPADTKAVVAGLSAVGEQYIDLRPE 116
Query: 118 RKEKKTIFQIATERNQR 134
+
Sbjct: 117 SDGSPYLADGTRIEQAD 133
>gi|302551008|ref|ZP_07303350.1| MCE family protein [Streptomyces viridochromogenes DSM 40736]
gi|302468626|gb|EFL31719.1| MCE family protein [Streptomyces viridochromogenes DSM 40736]
Length = 393
Score = 73.0 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 40/348 (11%), Positives = 90/348 (25%), Gaps = 9/348 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
A V P +V G+ S VR G+ +G + + + + D +
Sbjct: 50 RKEPARVTAYFPRTV-GIYPGSDVRVLGVRIGEVRKITPEG---GRVRVELEYDADRKVP 105
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM-----ITATPSGINYFIS 149
A I + Y++L + + + R S +
Sbjct: 106 ADAQAAIINSSVVSDRYVQLLPVYRSGPALRDGDEIPESRTAVPVELDRVFDSLHTTAEA 165
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ K SR + +N++ +E +S + + T Q
Sbjct: 166 LGPEGANKDGALSRLLGVSADNLDGQGENVHRMVEDLSEAVTTLSDGRTDLFGTVQNLQV 225
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ + + S + A + + ++ S+ V N +
Sbjct: 226 FTAALAADDKSVRSFNSSLAKVAAQLAGERKDLAAALKNLGTALGDVSEFVKNNKKSLTS 285
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+V + + + ++ T N A + S + ++
Sbjct: 286 NVSGLSKVTKVLVTQRAALQELLEVAPTGMSNLNNAYNPSAGTLDTRNNPDRPQDPASLL 345
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
+I ++ D F L + + A
Sbjct: 346 CSILKTTGEKTDCGDLRDLFDSLPEVPQGTAVTGTVDRTLGGILGASA 393
>gi|83312110|ref|YP_422374.1| paraquat-inducible protein B [Magnetospirillum magneticum AMB-1]
gi|82946951|dbj|BAE51815.1| Paraquat-inducible protein B [Magnetospirillum magneticum AMB-1]
Length = 535
Score = 73.0 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 35/399 (8%), Positives = 93/399 (23%), Gaps = 38/399 (9%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + L S V F IPVG I L + + L A D + T
Sbjct: 170 VLVARDIGSLDVGSPVFFRRIPVGHIESYALQPDGHSLFLSAFVKAPYDRFVTDGTRFWH 229
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + T + + + E+ I
Sbjct: 230 ASGVDLR--------------------LDAGGLKLNTQSLAAMLLGGVAFESPDGNIEAP 269
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ A ++ + + V ++
Sbjct: 270 EAAPATRFALAADHDSALKAPDGEAYPLVLRFHQTVRGLTIGAPVDFRGAELGQVRAITM 329
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + L+ + Q R +
Sbjct: 330 AYDRETADFTPVVTVDVYPDRLDVVGADPKPLTDEQRQRRLVELVRRGLRAQLRTGNLVT 389
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
L + + + + + + + ++ I N
Sbjct: 390 GQLYVALDFFPNAPPVKLNPAAEPPELPTVPGDFEELYKQVQAILRKLDKVP-LDAIGQN 448
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
L+ + + + ++ + + + + ++ R + E + +
Sbjct: 449 LHATMKHLDAMTARTDK--------EVLPELRDSLKEMRASMESLTAAMAGDAP------ 494
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D + ++ L E ++ +R P+ ++ GR
Sbjct: 495 --LQQDTRQALKGLTEATRSLKRLTDSLDRQPESLLQGR 531
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY---PNHSLAKALIRPD 90
DG +++R +V GL+ + V F G +G++ + + + + + PD
Sbjct: 291 DGEAYPLVLRFHQTVRGLTIGAPVDFRGAELGQVRAITMAYDRETADFTPVVTVDVYPD 349
>gi|315181366|gb|ADT88279.1| paraquat-inducible protein B [Vibrio furnissii NCTC 11218]
Length = 519
Score = 73.0 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/403 (9%), Positives = 108/403 (26%), Gaps = 30/403 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
I+ L V F G VGR+ D E +L + I +
Sbjct: 132 IVLTHREAGKLGVGDPVIFKGFTVGRVEKTSFDVET-RQALYQLFIFK----PYDSLIRT 186
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
R++ + + + + + P + + T+
Sbjct: 187 RSKFWLSSGVDLQLNTEGFELKLGSLESLLTGGVTFDSVPGMDSGDPLTEDMTNF----- 241
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ +++++ + +I + +
Sbjct: 242 -----RLYDDVKQLREGIYDEYIDFVMLFDESIRGLKAKAPVEYRGLRIGTVMKVPLRLP 296
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
S + ++ L + + + + + +R T +T + +
Sbjct: 297 TQEESFSVKRIPVLVRIELGRLFDNFHTDSMDEYNEKLKLEFARGLRGTLKTGSLITGAL 356
Query: 282 ---DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
D + S+ + + + T+ ++
Sbjct: 357 YIDTDFYPDAAKYEPSEFLGLSVFPTMRGGFAQVQKQVNDFLYKINKLPMEDTLESLNQT 416
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + + IN + E + D ++++ + T +
Sbjct: 417 LKTSERTLASAERMANSINKLLNQNETQQIPADIRQSLQQLQKTLDGY------------ 464
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+ + +D+Q+ +++L++ + F L P +V+G +
Sbjct: 465 GPNSTMYSDMQSTLKELEKVMTEFKPVLKQLNDKPNALVFGVD 507
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 25/267 (9%), Positives = 76/267 (28%), Gaps = 13/267 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ ++ S+ GL + V + G+ +G ++ + L ++
Sbjct: 257 EYIDFVMLFDESIRGLKAKAPVEYRGLRIGTVMKVPLRLPTQEE---SFSVK-----RIP 308
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
I L + + EK + R + + +
Sbjct: 309 VLVRIELGRLFDNFHTDSMDEYNEKLKLEFARGLRGTLKTGSLITGALY-----IDTDFY 363
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + + ++ + A ++ I+ + + S+ T
Sbjct: 364 PDAAKYEPSEFLGLSVFPTMRGGFAQVQKQVNDFLYKINKLPMEDTLESLNQTLKTSERT 423
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + S++K++ + Q++ + + D++ T + ++
Sbjct: 424 LASAERMANSINKLLNQNETQQIPADIRQSLQQLQKTLDGYGPNSTMYSDMQSTLKELEK 483
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLEN 303
V + +L + K + N
Sbjct: 484 VMTEFKPVLKQLNDKPNALVFGVDDVN 510
>gi|312137899|ref|YP_004005235.1| mce family protein mce1c [Rhodococcus equi 103S]
gi|311887238|emb|CBH46547.1| putative Mce family protein Mce1C [Rhodococcus equi 103S]
Length = 356
Score = 73.0 bits (176), Expect = 8e-11, Method: Composition-based stats.
Identities = 44/299 (14%), Positives = 105/299 (35%), Gaps = 21/299 (7%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VG+ ++ + I L ++ AE+ + GLS V G+P GR+
Sbjct: 36 VGIVLLVAGLAAAIGIPKLWYLSRTSPYSAEL-----ANASGLSDGDPVYVAGVPAGRVE 90
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
G+ + H + PL TTA++R + + G Y+E+
Sbjct: 91 GIDIAGN---HVRVDFRLDDGQPLGNRTTASVRLETVLGKRYLEVVPAGVVTAENADATA 147
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISD-----SSRHIQKIIENIEKPLTTTIANIE 184
T P ++ +A + + +I R + +++ + + L +A +
Sbjct: 148 ANVIPLARTTVPYSLDDMSRDATDAATEIDTASLEAMMRTLSEVMPDDPEQLGRVLAGVS 207
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
S V++ N ID+++ ++ + + + T A+ + + +++E
Sbjct: 208 GASAVVSRNAEQIDQLLEMSRSVSDLAVRQGDSLSTTVANAQTIVRTLAVRREVLTELVE 267
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK--------IDHLLSDFSSKMKSK 295
N++ ++ + + + + Q+ +D L + +
Sbjct: 268 NLRSVLSSLASTYTEHEEEFGQMTTNLVDVTDTLQRNADHIGQILDRLPRALRAATDAT 326
>gi|254777451|ref|ZP_05218967.1| hypothetical protein MaviaA2_22671 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 488
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/407 (10%), Positives = 111/407 (27%), Gaps = 42/407 (10%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G V+ L + W Y+ ++ + + L V+ G+ VG
Sbjct: 20 VILGALVIV-LALVVGYVGW----RLYEKLTNNTVVAYFPAANALYPGDKVQIMGLRVGA 74
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I + + + + + +A I L I+L K +
Sbjct: 75 IDKIEPSGD---KMKVTFHYQNKYRVPANASAVILNPTLVASRAIQLEPPYKGGPVLADN 131
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
A +R + P + ++ N K+ ++ + + + +
Sbjct: 132 AVIPEERTQV---PVEWDQLRNSITNIISKLGPTAEQPKGPFGEVIESFADGL------- 181
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
A + + + + +L D Q+ + +N+
Sbjct: 182 ---AGKGKQFNTTLTNLSRALTALNEGRGDFFAVVRSLALFVNALHQDDQQFVALNQNLA 238
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL----LSDFSSKMKSKETSAFLEN 303
+ S + N + T + K + + + + + L
Sbjct: 239 DFTTRLAHSDGDLANAIEQFDSLLTTVRPWLDKNRGVLTYDVKNLETATNALLQPDPLNG 298
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ + + ++ + I +I + I +I N + + + +
Sbjct: 299 LETALHVLPTAAANINQIYHPSHGSVVAIPSITNFANPMQFICSAIQA-----GSRLGYQ 353
Query: 364 ENNSLFKD-AQRAMHTFR-----------DTSEKINRYIPSIGNNLQ 398
E+ L + + T+E + + + LQ
Sbjct: 354 ESAELCAQYLAPILDAIKFNYPPFGLNLFSTAETLPKEVAYSEPRLQ 400
>gi|75908886|ref|YP_323182.1| hypothetical protein Ava_2674 [Anabaena variabilis ATCC 29413]
gi|75702611|gb|ABA22287.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 470
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/417 (10%), Positives = 132/417 (31%), Gaps = 17/417 (4%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ WL+R G + ++ + G+ ++VR+ G+ VGRI + PN
Sbjct: 33 VILLWLNRYTA-AGSSYKAVVEF-ANAGGMQRGATVRYRGVKVGRISQIQP---GPNAVE 87
Query: 83 AKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLR--KEKKTIFQIATERNQRAMITA 139
+ + D + GL + I+++ + + + + ++I
Sbjct: 88 VEIEFAQSDLIIPRDVVIEANQTGLISESIIDITPKSSLPTGQNLTKPLDKNCDNSLIVC 147
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
S + I + + + S + E ++ + + + V A
Sbjct: 148 NNSRLKGQIGISVDALIRSSTDFANTYNNPEFYQRVNRLLETSAQAATGVAALTQDFRGL 207
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
+ + NT T+ +T ++ +S +
Sbjct: 208 TKSFQGQLGTFASTANTVQRATNELTVSTTKTVNQFGITADKFGTTATQASRLLSDLNSL 267
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + E ++ +++ S + ++N+ ++N + + +R
Sbjct: 268 LNTNRSSLVGALNNITETSNQLRLTVTNLSPSLNRLTQGELIKNLETLSANAAQASANLR 327
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTF 379
T+ + + ++ + + + ++ S ++ ++ + +
Sbjct: 328 NATESLNDPKNAVL-LQQTLDSARLTFENTQKITSDLDELTGDPSFRQNLRQLVNGLSGL 386
Query: 380 RDTSEKI--NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+++++ + ++ +++ + I +L N + + PQ
Sbjct: 387 VSSTDQMEQQAKLATVLESMKAAADKPNITIPSL------ATNPLPNAVTIANNQPQ 437
>gi|224437095|ref|ZP_03658076.1| hypothetical protein HcinC1_03965 [Helicobacter cinaedi CCUG 18818]
gi|313143565|ref|ZP_07805758.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128596|gb|EFR46213.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 253
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/256 (17%), Positives = 76/256 (29%), Gaps = 4/256 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME Y +G IL + WL+R V G+ T++ + +
Sbjct: 1 MERNVRYVWIGAIFFIILILMILFVLWLNRFELDSAKYTRYYAYSADEVSGVGTNTPIHY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GI VGR+ + LI + + + +QGLAG Y+ L E
Sbjct: 61 KGISVGRVQSVGFKDIKSGVIAIAMLIDSKLEIKQNAKVIVASQGLAGANYLSLIQGEGE 120
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
A E+ R ++ E + + + + E LT I
Sbjct: 121 ----TLQANEQGDRVIMLDKGGLDKILGKAGEISEDMTALLANLNRTFNEENLNNLTEMI 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + ++ LA+ + +DK M + + L A
Sbjct: 177 KELRSSTSSLASLSAQMDKNMKNGEYNVREILTPTLLQLQGSLQDMSRFFNTATRFVDKV 236
Query: 241 QILENIQVSSNNFVKS 256
+ KS
Sbjct: 237 DKNPYDSLFGKQNDKS 252
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 18/139 (12%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL-- 368
++ ++ + I+ ++ I + S+ L++ +N + N+L
Sbjct: 115 IQGEGETLQANEQGDRVIMLDKGGLDKILGKAGEISEDMTALLANLNRTFNEENLNNLTE 174
Query: 369 -FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
K+ + + + S ++++ + + N++ L +Q ++ + N ++
Sbjct: 175 MIKELRSSTSSLASLSAQMDKNMKNGEYNVREILTPTLLQLQGSLQDMSRFFNTATRFVD 234
Query: 428 NFERNPQDIVWGREKGSVK 446
++NP D ++G++ K
Sbjct: 235 KVDKNPYDSLFGKQNDKSK 253
>gi|124268283|ref|YP_001022287.1| putative ABC transport system substrate-binding protein
[Methylibium petroleiphilum PM1]
gi|124261058|gb|ABM96052.1| putative ABC transport system substrate-binding protein
[Methylibium petroleiphilum PM1]
Length = 160
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 25/119 (21%), Positives = 43/119 (36%), Gaps = 1/119 (0%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VGLFV+ F + ++ GL + V+
Sbjct: 1 MQKSKHDVWVGLFVMIGAAAIVFLALKAGNLLSLSFDDTYTVSARFDNIGGLKVRAPVKS 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+V + D + + + + ++A I T GL G YI L +
Sbjct: 61 AGVVVGRVVAIGFDADTY-QARVEIDLEKRFGFPADSSAKILTSGLLGEQYIGLEPGTE 118
>gi|306803687|ref|ZP_07440355.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu008]
gi|308349688|gb|EFP38539.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu008]
Length = 379
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|262201128|ref|YP_003272336.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262084475|gb|ACY20443.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 413
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/303 (14%), Positives = 101/303 (33%), Gaps = 8/303 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK + +FV+ L + +R ++ G ++ G+ T++ V +
Sbjct: 1 MLSKLAKIQLIVFVIVGLVAIVYVGAKYARLDKLAGVGMYKVVAELPDSGGIFTNAEVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+PVGR+ L L Q+ + P + S A + ++ G +++L
Sbjct: 61 LGVPVGRVGQLKLTQKG---VDVTLELNSGGPDIPASAVAVVASRSAIGEQFVDLQPTST 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + + + + + K + LT
Sbjct: 118 GAPYLADGSRITKSQLPPPLQDVVASAIDFTSSIPVDDLHTVITELGKAFNGQGENLTRL 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF----NTITDLITSLDKMIKAID 235
+ ++ +S +NI ++ + V + ++ + +LIT+ +
Sbjct: 178 VDSLGKLSRAGVDNIGATVDLIDNSNVVLQTQAEQSDEILAWSRSINLITATLQSSDPDL 237
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + SN ++ + V D+ E +T Q G + S+
Sbjct: 238 RRLLTTGTLSATQISNLIQRNGGDLSKVVKDLGEVARTVQPAGYATSTTFAMLSALSAGS 297
Query: 296 ETS 298
T
Sbjct: 298 HTP 300
>gi|254465312|ref|ZP_05078723.1| mammalian cell entry related [Rhodobacterales bacterium Y4I]
gi|206686220|gb|EDZ46702.1| mammalian cell entry related [Rhodobacterales bacterium Y4I]
Length = 694
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/418 (10%), Positives = 109/418 (26%), Gaps = 28/418 (6%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
V + SV GL++ ++VR G+ VG + L A + D P
Sbjct: 292 SEGVSVAVAFDESVAGLASGAAVRLGGVKVGEVSTLN----------AAIQNQNDEPEVR 341
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+ L G+ E + A + RA + A + I
Sbjct: 342 LIAKLLLQPALMGL---PPGAGEAEVLDFLEQAVDGGLRARLAAAGLLSSELIVELVTLD 398
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + + + T + + + + S
Sbjct: 399 EAAPARFDRSAEPFPELPSAPSDLPDFTATAEGAMERISELPVEELM--AQAIATLASIE 456
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ + ++ + + + ++ + +V++
Sbjct: 457 DLASADSTREVPAAAVALLEDTRALVADPGTRALPAELTAAVTELRAILTEVQQGNAAAN 516
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
+ S S E A + + D + S + + + +
Sbjct: 517 LSAALEQGSKAAASLAAASDELPALVSDFRDLAAKANSLEAEELIRSASQLMNSADALIG 576
Query: 336 ENITSN----LNDSSQKFAELMSKINNISALKENNSLFKD-------AQRAMHTFRDTSE 384
+ L + + + + + N+ A S
Sbjct: 577 TEEARDLPPALTGALDEVRATLEALRQGGLVDNANATMASARGAADAVAAAAEGLPALSA 636
Query: 385 KINRYIPSIGNNLQNFSQSGLNDIQNL--VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++ R + + ++ + + L +R+++ ER+P +++G+
Sbjct: 637 RLERLVAQSEALIASYGARSSFNSETLDALREVKTAARAVSQLARKIERDPNSLLFGK 694
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 94/403 (23%), Gaps = 18/403 (4%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGLAGIT 110
+S + V F G+ VGR+ L + + A D + +T +
Sbjct: 177 ISEGAPVLFRGVEVGRLEQPRLTASGDSVVVDAFIDAPHDRRINSATRFWDTSGFSVSFG 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
LS ++ E + P G + E+ + + Q
Sbjct: 237 ASGLSLDVDSIASLVAGGIEFDTV-FDGGKPVGKDTVFDIHEDEAAARRTAFARSQSEGV 295
Query: 171 NIEKPLTTTIANIETISTVLANNIS--HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++ ++A + + + V + + + Q + + +
Sbjct: 296 SVAVAFDESVAGLASGAAVRLGGVKVGEVSTLNAAIQNQNDEPEVRLIAKLLLQPALMGL 355
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + ++ + + +
Sbjct: 356 PPGAGEAEVLDFLEQAVDGGLRARLAAAGLLSSELIVELVTLDEAAPARFDRSAEPFPEL 415
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
S A + M E + + +
Sbjct: 416 PSAPSDLPDF-----TATAEGAMERISELPVEELMAQAIATLASIEDLASADSTREVPAA 470
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR--------YIPSIGNNLQNF 400
L+ + A +L + A+ R ++ + G+
Sbjct: 471 AVALLEDTRALVADPGTRALPAELTAAVTELRAILTEVQQGNAAANLSAALEQGSKAAAS 530
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDC-LNNFERNPQDIVWGREK 442
+ +++ LV ++ + R+ ++ +
Sbjct: 531 LAAASDELPALVSDFRDLAAKANSLEAEELIRSASQLMNSADA 573
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 8/96 (8%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIP 64
+ V L ++ L S + Y + I + G+ + ++VR+ +
Sbjct: 21 NLSLVWLVPLAALAVSLGVAWQA-----YSSRGVLIRITF-ENASGVVANETAVRYRDVA 74
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+G++ L ++ + A I Y A
Sbjct: 75 IGQVEELGFTED-LSKVTVWARIDKKIAPYLDQDAA 109
>gi|322835507|ref|YP_004215533.1| hypothetical protein Rahaq_4827 [Rahnella sp. Y9602]
gi|321170708|gb|ADW76406.1| Mammalian cell entry related domain protein [Rahnella sp. Y9602]
Length = 531
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/401 (10%), Positives = 97/401 (24%), Gaps = 37/401 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S+V + +PVGR+ L + + D P T+ R
Sbjct: 167 DDLGSLDIGSAVYYRRVPVGRVSSYALRPDGKG---VSLNVFIDAPYDRFVTSATRFWNA 223
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+G+ S + K N +
Sbjct: 224 SGVDLSLDSEGLQIKTQTMASVIAGG----------------IAFANPPDDSTAKPAASH 267
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
++ + + T + + M V S D +
Sbjct: 268 RVYTLADDQASAMTPPDGTPQVLQLRFQQSLRGMKTGAPVEFSSVKLGKVTAIELDYDPA 327
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ I + ++ L ++Q K + + + G +
Sbjct: 328 ASRFISVVTIEVYPNRLGHVQ------EKLPKPEKDGQQQAATFLRDMVKHGLRAQARTG 381
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + + S + I +++
Sbjct: 382 NLLTGQLYISLDFVPSALPVSFDMTVRPLQIPTLNGGFDHLQEQLATLIGKLSTMP---- 437
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ S +N +L + ++ + T + ++ + S L S
Sbjct: 438 --IESIGSNLNATLGNLN-QTLIQVNRQVLPQTTQTLRQFDQTMGSAQTLLAADSP---- 490
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + + Q T+ R PQ ++ GR + +
Sbjct: 491 -LLQTLAEFQRTLYSLRTLTGLLTRQPQALIAGRNSENKEQ 530
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPD 90
+ +R S+ G+ T + V F+ + +G++ + LD + S+ + P+
Sbjct: 290 LQLRFQQSLRGMKTGAPVEFSSVKLGKVTAIELDYDPAASRFISVVTIEVYPN 342
>gi|299769442|ref|YP_003731468.1| paraquat-inducible protein [Acinetobacter sp. DR1]
gi|298699530|gb|ADI90095.1| paraquat-inducible protein [Acinetobacter sp. DR1]
Length = 553
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/403 (9%), Positives = 106/403 (26%), Gaps = 39/403 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 187 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 225
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S ++
Sbjct: 226 IRAPYDKFVTTDARFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPESSHATMAAN 285
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ N+ + + + + H + + +I
Sbjct: 286 QSRFNLWDSKSEALKEPDGQPRGVIMYFDHSLRGLSVGAPIDFMGIEIGNVKSINAEFYD 345
Query: 227 LDKMIKA-IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
K I+ ++ +EN Q + N D V + T + +D
Sbjct: 346 HYKQIRMRVEAVIYPSRVENGQALNPNSEIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 405
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + + ++ + +N+N
Sbjct: 406 PKAKPATLQILSDNRVVIPTTPTELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLNNMNT 465
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ +L+ +++ A + D ++ + +
Sbjct: 466 AIASTDKLVKQLDGKVA-PGLQATLDDVRKTVRSSESILSS---------------DAPL 509
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
D++ ++++ + E++P+ I+ G+ +
Sbjct: 510 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGKTPEADDE 552
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
DG VI+ S+ GLS + + F GI +G + + + ++ +
Sbjct: 303 DGQPRGVIMYFDHSLRGLSVGAPIDFMGIEIGNVKSINAEFYDHYKQIRMRVE 355
>gi|256787965|ref|ZP_05526396.1| secreted protein [Streptomyces lividans TK24]
gi|289771852|ref|ZP_06531230.1| secreted protein [Streptomyces lividans TK24]
gi|289702051|gb|EFD69480.1| secreted protein [Streptomyces lividans TK24]
Length = 433
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 7/137 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F++ + F + +Y G V + +P + GL T S V
Sbjct: 1 MITLAVRLKNLAFLLIAVLALSFLGIRYADLGRYVGVADYYTVDVHLPRT-GGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L E +A+ I+ P + T A + G YI+L
Sbjct: 60 TYRGVSVGRVGPIDLTAEG---VVAELRIKKSAPRIPADTKAVVAGLSAVGEQYIDLRPE 116
Query: 118 RKEKKTIFQIATERNQR 134
+
Sbjct: 117 SDGSPYLADGTRIEQAD 133
>gi|240173462|ref|ZP_04752120.1| MCE-family protein Mce1D [Mycobacterium kansasii ATCC 12478]
Length = 535
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/345 (11%), Positives = 102/345 (29%), Gaps = 13/345 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG + +L + W Y ++ + + L V+ G
Sbjct: 16 TRAT-VIVGTL-IVVLALVAAFVGW----RLYQKLTNNTVVAYFPAANALYPGDKVQIMG 69
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG+I + + + + + +A I L I+L K
Sbjct: 70 LQVGKIDSIEAAGD---KMKVTFHYQNQYKVPANASAVILNPTLVASRSIQLEPPYKGGP 126
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ A +R + P + ++ N K+ + + + + + +A
Sbjct: 127 VLADNAVIPIERTQV---PVEWDELRNSITNIIDKLGPTEQQPKGPFGEVLESFANGLAG 183
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+N+S ++ + + + +L +
Sbjct: 184 KGKQFNTTLDNLSRALTALNEGRGDFFAVVRSLALFVNALHQDDAQFVALNQNLADLTGR 243
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQT-FQEVGQKIDHLLSDFSSKMKSKETSAFL 301
L + + ++ ++ D ++ T+ +T + + + L
Sbjct: 244 LVSSDQALSDALQQFDSLLTTIRPFLDTNREVLTHDVNNLAEATNTLLQPEPLNGLETAL 303
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + SN+ +I S N ++ I S++ +S
Sbjct: 304 HVLPTAASNVNQIYHPSHGSVVAIPEITSFANPMQFICSSIQAAS 348
>gi|226304161|ref|YP_002764119.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183276|dbj|BAH31380.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 412
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 48/134 (35%), Gaps = 3/134 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ Y + F++ + + + + V + + + G++ S V +
Sbjct: 1 MKNRTVYFEIVAFLLIAVVST-TYVLRQVGAGDPFTGTFSVTVEL-ENAAGIAPGSEVAY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + +D + I D + + I + ++LS+
Sbjct: 59 RGVTVGDVESVEVDSAQD-LVVMTLSIAADKQIPNDSHVAISQDTAVPVLKVQLSSQTDG 117
Query: 121 KKTIFQIATERNQR 134
+ + + +R
Sbjct: 118 GPYLVEGSVVPTER 131
>gi|120401164|ref|YP_950993.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119953982|gb|ABM10987.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 523
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/289 (13%), Positives = 86/289 (29%), Gaps = 6/289 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+ + IL + + + G+++ VR G+
Sbjct: 7 SNRIRGGMMGIIILVLVIGVGQSFASVPMLF-ATPTYYAQFSDT-GGINSGDKVRIAGVD 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + + +D + L + T + + IRT + G +E+ E
Sbjct: 65 VGTVRSMEIDGD---RVLIGYGL-GGTEIGTESRVAIRTDTILGRRNLEIDPRGSEPLRA 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + A +K + DS + + I+ L+ + +
Sbjct: 121 NGVLPLGQTTTPYQIYDAFFDVSNNTAGWDTKTVRDSLNVLSETIDQTSPHLSAALDGVA 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
S + I +++ +++ + V+Q+LE
Sbjct: 181 RFSDTIGKRDEQIKQLLANANKVAGVLGNRSEQINQLFVNAQSLLAAINERNYAVSQLLE 240
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ S D N H + + + ++ L SS K
Sbjct: 241 RVDTFSTQVRGFIDDNPNLNHVLEQLRVISDVLAERKLDLADTLSSLSK 289
>gi|308372104|ref|ZP_07427410.2| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu004]
gi|308334405|gb|EFP23256.1| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu004]
Length = 372
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|167034285|ref|YP_001669516.1| hypothetical protein PputGB1_3288 [Pseudomonas putida GB-1]
gi|166860773|gb|ABY99180.1| Mammalian cell entry related domain protein [Pseudomonas putida
GB-1]
Length = 546
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/404 (9%), Positives = 87/404 (21%), Gaps = 34/404 (8%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + L SS+ + IPVG +V L + + D+ + T
Sbjct: 168 VLTASDLGSLDVGSSIYYRKIPVGEVVSFALQDDGKGVEIGVFVQAPYDSFVTADTRFWN 227
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ I L + +I +
Sbjct: 228 ASGVDMQIGANGLKVDTESLSSILVGGLAFGSPDFAPQAEPAADQARFQLFADRDLALAP 287
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ ++ ++ + + +
Sbjct: 288 PHGQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYDAARQTFPVVVDAVIYPQ 347
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
L + + RE TF E G +
Sbjct: 348 RL-----------------------GPVHRKMLAVFKHTEGDMDGARELIGTFVEHGLRA 384
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
+ + + + + + I Q +E I
Sbjct: 385 QARSGNLITGQMFISLDFYPDAPKVAFDMAANPIIIPTLPGSLEQLQEQLQRVVERIAKL 444
Query: 342 L-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + ++ +L D + A+ T N I +
Sbjct: 445 PLESIAGNLDGSLRELRASLKQFNGQTL-PDVKVALDEVHKTLRTANSAISEDSPQRER- 502
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + +L+ D + R+P+ ++ GR K +
Sbjct: 503 -------MGETLDELERMSRSLRDLADYLGRHPESLIRGRPKAA 539
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 40/129 (31%), Gaps = 5/129 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + +R ++ GLS + V F G+ GR+ + LD + + + D +YP
Sbjct: 290 GQAQYLQLRFDQAMRGLSVGAPVEFKGVEFGRVTSIQLDYD---AARQTFPVVVDAVIYP 346
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+ + L + + + E RA + + +
Sbjct: 347 QRLGPVHRKML--AVFKHTEGDMDGARELIGTFVEHGLRAQARSGNLITGQMFISLDFYP 404
Query: 156 KKISDSSRH 164
+
Sbjct: 405 DAPKVAFDM 413
>gi|306782577|ref|ZP_07420914.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu002]
gi|308324767|gb|EFP13618.1| MCE-family protein mce4D [Mycobacterium tuberculosis SUMu002]
Length = 345
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 78/283 (27%), Gaps = 9/283 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V++++ +Y LS + I+ S GL VR G+PVG I +
Sbjct: 18 VIALVAALVGGVYVLSSTGNKRT-----IVGYFTSAVGLYPGDQVRVLGVPVGEIDMIEP 72
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF-QIATERN 132
+ D + A I + L +I+L+ + + + +
Sbjct: 73 RSSD---VKITMSVSKDVKVPVDVQAVIMSPNLVAARFIQLTPVYTGGAVLPDNGRIDLD 129
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ A+ A + S + + I L ++ LA
Sbjct: 130 RTAVPVEWDEVKEGLTRLAADLSPAAGELQGPLGAAINQAADTLDGNGDSLHNALRELAQ 189
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ T + + +D A Q + N+ +
Sbjct: 190 VAGRLGDSRGDIFGTVKNLQVLVDALSESDEQIVQFAGHVASVSQVLADSSANLDQTLGT 249
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ + + + T LSD S ++
Sbjct: 250 LNQALSDIRGFLRENNSTLIETVNQLNDFAQTLSDQSENIEQV 292
>gi|306808261|ref|ZP_07444929.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu007]
gi|308345385|gb|EFP34236.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu007]
Length = 400
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 39 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 94
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 95 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 145
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 146 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 205
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 206 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 265
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 266 ALDKLNGVLAIVENRKERVRQA 287
>gi|119717043|ref|YP_924008.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119537704|gb|ABL82321.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 422
Score = 73.0 bits (176), Expect = 9e-11, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 40/134 (29%), Gaps = 6/134 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI-YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + F+V + +L ++ G V +P S GL S V
Sbjct: 1 MST-GVKVRIAAFLVLSAVGVVYVAGSYLGFVDRILGRGITVHATLPTS-GGLFEGSEVT 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ +G++ + E + T L + + G Y++
Sbjct: 59 YRGVKIGKVSAMTATAEG---VRLDLALEEGTRLPADSPMYVHNLSAVGEQYLDFEPADA 115
Query: 120 EKKTIFQIATERNQ 133
+ T
Sbjct: 116 AGPYVAAGDTLHGT 129
>gi|308370876|ref|ZP_07423053.2| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu003]
gi|308330571|gb|EFP19422.1| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu003]
Length = 394
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|224824234|ref|ZP_03697342.1| Mammalian cell entry related domain protein [Lutiella nitroferrum
2002]
gi|224603653|gb|EEG09828.1| Mammalian cell entry related domain protein [Lutiella nitroferrum
2002]
Length = 528
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 51/464 (10%), Positives = 109/464 (23%), Gaps = 65/464 (14%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-----------------LSTDSS 57
VS L Y + + E V G LS
Sbjct: 99 VSGLGTLLSGAYIQLQPGKSPERKTEFQALASAPVTGPDVPGLRIRLNGQNVRVLSVADP 158
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V + G VGR+ D + Q Y L T
Sbjct: 159 VLYQGFQVGRVETAHFDPATR---------------------QMNYQLFIEQPYDRLVTD 197
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + T S + + + P
Sbjct: 198 TSRFWVASGLQISATAEGLKIRTGSLETLVSGGVAFDVPRGRPLGGRVANMTPFNLYPDQ 257
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+I E S + ++ D+ + V T+ L L + + +
Sbjct: 258 DSIN--EQYSGRHIDYLAFFDESVRGLTVGAPVEYRGLRIGTVQALPYPLKSQKRWVLGE 315
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL----------LSD 287
+ +L I+ S R + + L
Sbjct: 316 RRIPVLLRIEPDRIESFTQSRPNDWQQEIERAIGEGLNARLKTGSLLTGAVFVDLDFDGK 375
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + + K+ +T+NT + + +
Sbjct: 376 LRERHTASVDGLPVLPTTSGGLAQIETKVIALLNKLNGLKLDTTLNTADQTLAEGQRTLS 435
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ L +++ + A + L +D + + + T ++
Sbjct: 436 EVRRLTQRLDRLLAQPDTQQLPQDLRGTLQELQQTLNGVSPQ------------SPAYQQ 483
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+Q + L + + + + P +++ R S + +PK
Sbjct: 484 LQQSLSTLNQLLREMRPVVRTLDETPNALLFNR---SARDPEPK 524
Score = 49.9 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 42/446 (9%), Positives = 111/446 (24%), Gaps = 32/446 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLST-DSSVRFNGIPVGRIVGLFL 73
+ + ++ + + GP + + S +G++ +++R + +G++ + L
Sbjct: 4 IVPIIAMLAGLWMIYDTWSKLGPEITLNMA---SAEGITPEKTTIRVLDVNIGKVTAVRL 60
Query: 74 DQEYPN-HSLAKALIRPDTPLYPSTTATI-----------RTQGLAGITYIELSTLRKE- 120
+ + A+ D+ L + + L YI+L +
Sbjct: 61 SPDNKSVRVTARLDADTDSLLSVDSRFWVVKPRIDKTGVSGLGTLLSGAYIQLQPGKSPE 120
Query: 121 ----KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + +G N + + + ++ +
Sbjct: 121 RKTEFQALASAPVTGPDVPGLRIRLNGQNVRVLSVADPVLYQGFQVGRVETAHFDPATRQ 180
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
IE L + S T + T + + +
Sbjct: 181 MNYQLFIEQPYDRLVTDTSRFWVASGLQISATAEGLKIRTGSLETLVSGGVAFDVPRGRP 240
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ----------KIDHLLS 286
+ ++Q D +I + +
Sbjct: 241 LGGRVANMTPFNLYPDQDSINEQYSGRHIDYLAFFDESVRGLTVGAPVEYRGLRIGTVQA 300
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
K I I + + + E + + L S
Sbjct: 301 LPYPLKSQKRWVLGERRIPVLLRIEPDRIESFTQSRPNDWQQEIERAIGEGLNARLKTGS 360
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI-NRYIPSIGNNLQNFSQSGL 405
+ ++ L+E ++ D + T +I + I + + L
Sbjct: 361 LLTGAVFVDLDFDGKLRERHTASVDGLPVLPTTSGGLAQIETKVIALLNKLNGLKLDTTL 420
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFER 431
N + + Q T++ +R
Sbjct: 421 NTADQTLAEGQRTLSEVRRLTQRLDR 446
>gi|117164590|emb|CAJ88136.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
Length = 352
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 37/106 (34%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
F+V + +S + G++ SVR +G+ VG + +
Sbjct: 23 AFLVVTALATTVLGLSVSGTG-VGDDSVSYKALFTD-ATGVTDGDSVRISGVEVGEVTDV 80
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + +R D L STTA ++ + G YI L
Sbjct: 81 RVV--DRRTAQVTFSVRDDRTLPRSTTAAVKYLNMVGQRYIALDRG 124
>gi|325673335|ref|ZP_08153027.1| hypothetical protein HMPREF0724_10809 [Rhodococcus equi ATCC 33707]
gi|325555925|gb|EGD25595.1| hypothetical protein HMPREF0724_10809 [Rhodococcus equi ATCC 33707]
Length = 348
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
V F + LS + D V V+GL + V G+ VGR
Sbjct: 9 AKVLGFCAVGAACASLVANTLSVPVRGDSERYTVE---FTDVEGLHEGNPVTMAGVRVGR 65
Query: 68 IVGLFL--DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + + ++ + D L +TTA +R + G Y
Sbjct: 66 VDSIAFADAGGGTSKAIVGIEVSSDHSLDRNTTAAVRYGDMLGARY 111
>gi|189423566|ref|YP_001950743.1| hypothetical protein Glov_0495 [Geobacter lovleyi SZ]
gi|189419825|gb|ACD94223.1| Mammalian cell entry related domain protein [Geobacter lovleyi SZ]
Length = 360
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/366 (10%), Positives = 109/366 (29%), Gaps = 25/366 (6%)
Query: 1 MESKNYYT-----SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
ME ++ G+F++ L + +I + + + P + + I + +V GL
Sbjct: 1 ME-RSNQIGWAQVRAGVFILITLLLAAGAILLMGQKTKLFIPTSTIRITMK-NVMGLKEG 58
Query: 56 SSVRFNGIPVGRIVGLFL-DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYI 112
+ V G+ VG + + + N L A + + P + TI+T+GL G Y+
Sbjct: 59 APVWLAGVDVGVVQQIRFENPRDTNEVLIVAEVDSKAHKKIGPDSIITIKTRGLMGEKYV 118
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ + ++ ++K + + I++N+
Sbjct: 119 ---------------DILPSASYYDRPVSRFNGKAVHTLDDVAQKAGVTFEKLNSIVDNV 163
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ T + + + + + + +
Sbjct: 164 QSGKGTLGLLATDTKLYINAVQLSSELNTLAGNINRGQGTLGKLARSGEPYDKLMQILSR 223
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
A + Q + + ++++ + +E+ +++ + +
Sbjct: 224 ADKTLQDIQTADGSLNRLIHDKALYTKLVSLAEKSNQAADDVRELNRRLTSKDTTLGMLL 283
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+E ++ N + + + + + + LN + L
Sbjct: 284 SDRELYDKGLSLITRADNSMKDLESAAARIKAGEGTAGKLINEKELYEKLNRAVDNMDAL 343
Query: 353 MSKINN 358
M I
Sbjct: 344 MVDIRK 349
>gi|315443158|ref|YP_004076037.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261461|gb|ADT98202.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 486
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + +F + + ++ ++ +V + +P + GL S+V
Sbjct: 1 MRVTRQMLIQLAIFSLLAVTALGIMVFGYMRLPEMVGIGQYKVTLELPET-GGLYERSNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G VG + + L A+ + D + A++R+Q G ++EL
Sbjct: 60 TYRGSQVGIVESVGL---TDRGVAAELSLNSDVKIPADLIASVRSQSAVGEQFVELVPQS 116
Query: 119 KEKKTIFQIATERNQR 134
+ + R
Sbjct: 117 GDGPVLRNGDVISRDR 132
>gi|196019061|ref|XP_002118919.1| hypothetical protein TRIADDRAFT_62904 [Trichoplax adhaerens]
gi|190577724|gb|EDV18595.1| hypothetical protein TRIADDRAFT_62904 [Trichoplax adhaerens]
Length = 367
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
F S ++ D +I I ++DG+ S V+ +G+ +G++ LD + + +
Sbjct: 100 FFSNDKSSDHKLDKNDQYIINAIFDNIDGIKLGSGVKVSGVVIGKVTSQRLDYDTYS-AE 158
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ LI L ++A I + + G Y
Sbjct: 159 VQMLINKKIKLPEDSSAQIVSSSILGDKY 187
>gi|182434826|ref|YP_001822545.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326775344|ref|ZP_08234609.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
gi|178463342|dbj|BAG17862.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326655677|gb|EGE40523.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
Length = 411
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 54/144 (37%), Gaps = 7/144 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F+V + + Y G V +++P + GL T S+V
Sbjct: 1 MITLAIRLKNLAFLVIAALALGYLGVRYADLGHYVGLRSYYTVTVQLPQT-GGLYTHSNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + A+ I D P+ S TA + G Y++L
Sbjct: 60 SYRGVSVGRVGPIELTENG---VEAQLRIEKDAPPIPDSLTAVVANLSAVGEQYVDLRPT 116
Query: 118 RKEKKTIFQIATERNQRAMITATP 141
R+E + + I A P
Sbjct: 117 REEGPFLGNGSVIDEADTTIPAPP 140
>gi|170699230|ref|ZP_02890282.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
IOP40-10]
gi|170135890|gb|EDT04166.1| Mammalian cell entry related domain protein [Burkholderia ambifaria
IOP40-10]
Length = 531
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/449 (9%), Positives = 125/449 (27%), Gaps = 52/449 (11%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEV-----------------IIRIPGSVDG 51
VG +S L Y + + + + S+
Sbjct: 113 RVGATGISGLGTLLSGAYIGADLGRSPHEQTDFAGLETPPAVTADQQGRRYLLHGDSLGS 172
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S V + + VG++VG LD++ P R +G+
Sbjct: 173 IDIGSPVFYRHLQVGQVVGFSLDKDGTG---VDVQAFVKAPYDKYVGTNTRWWHASGVDL 229
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S K + + + + +
Sbjct: 230 RLDSNGLKLNTQSLATVVVGG--------LAFQSPPEQADAPPAADNASFRLAPDEAEAM 281
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ T + + ++ ++ + + + ++ T + +
Sbjct: 282 RDPDGTPLMVVMRFDQSLRGLSVGAPVDLRGIALGQVTNIGIEYDEHSRTFSMKVTMALY 341
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + L + + + + +R + ++ +D +
Sbjct: 342 PSRLSRHSDTALPAPDTAGGHELLEHLVLQGLRGQLRTGSLLTGQLYVALDMFPKAPRAS 401
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ T L + ++ ++ ++ I D+ + I ++LN + + +
Sbjct: 402 VDVHRTPVELPTVPNTLDELQVQLADIARKLDKVP--------FDRIGNSLNGALEHANQ 453
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L ++ + A+ + + T + + +D+ +
Sbjct: 454 LFGHLDE--------QVVPQARDTLAAAQRTFDAAQATLRQ--------DSPMQSDVHDA 497
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++ L T+ + + ER+P+ +++G+
Sbjct: 498 MQSLTHTLQSLNTLADYLERHPEALLFGK 526
>gi|325860074|ref|ZP_08173200.1| virulence factor Mce family protein [Prevotella denticola CRIS
18C-A]
gi|327314701|ref|YP_004330138.1| virulence factor Mce family protein [Prevotella denticola F0289]
gi|325482359|gb|EGC85366.1| virulence factor Mce family protein [Prevotella denticola CRIS
18C-A]
gi|326944921|gb|AEA20806.1| virulence factor Mce family protein [Prevotella denticola F0289]
Length = 329
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/321 (9%), Positives = 84/321 (26%), Gaps = 17/321 (5%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+ L + + FF + +L + + ++ + GLST + V NG VG
Sbjct: 12 VKIALVAILAVVVLFFGMQFLKGLSFFSTDT-RYQMKFSD-ITGLSTSTPVYANGFKVGA 69
Query: 68 IVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + P I + TTA I + + + + + + +
Sbjct: 70 VKSIEYNYARPGDAVNVGVDIDKSMNIPEGTTAEIVSDLMGNVKVVLVFGKSSRM--LAE 127
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + + + K+ +
Sbjct: 128 NGVIDGRI------------NDGTLGDMKSMVPPLQKMLPKLDSILASVNMLLADPAIKG 175
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S N I+ + + + + +D +
Sbjct: 176 SLHNVNLITSNLTTSTRELNRLLAQANSSLPLLTANAGRVMDNANGMMKNANGGITEARG 235
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + DV+ T + ++ L + +S + ++ +
Sbjct: 236 AIRGAKGMLETLNGKVNGIDVQGTMTKVNTTLEHLNTLTAKLNSNEGTMGLLMNDPSLYN 295
Query: 307 STSNMRSSISAIREITDQRQK 327
+ + S ++ K
Sbjct: 296 NLNTTVRSADSLLNNIKTHPK 316
>gi|183980446|ref|YP_001848737.1| MCE-family protein Mce1D [Mycobacterium marinum M]
gi|183173772|gb|ACC38882.1| MCE-family protein Mce1D [Mycobacterium marinum M]
Length = 535
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/339 (7%), Positives = 89/339 (26%), Gaps = 12/339 (3%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
++ L + Y ++ S + L V+ G+ VG+I +
Sbjct: 20 VIIGSLVLVLGLVAAFVGLKLYQKLTNNTVVAYFPSANALYPGDKVQIMGLQVGKIDNIE 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + + +A I L I+L K + A
Sbjct: 80 PAGD---KMKVTFHYQNKYKVPANASAVILNPTLVASRTIQLEPPYKGGPVLADNAVIPL 136
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+R + P + ++ N K+ + + + + +
Sbjct: 137 ERTQV---PVEWDELRNSITNIIDKLGPTKDQPTGPFGEVLESFANGLEGKGKQINTTLD 193
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++S ++ + + L + + + +
Sbjct: 194 SLSRALTALNEGRGDFFA------VVRSLALFVNALHQDDKQFVALNQNLADVTGRLVGY 247
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
S+ + + + + + + +++ + + L + + +
Sbjct: 248 DRDLSNALQQFDSLLSTVRPFLDKNREVLTYDVNNLAEATNTLLQPDPLNGLETALHVLP 307
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
++ S + +I + + I + + +
Sbjct: 308 TAASNVNQIYHPAHGSVVAVPEITSFANPMQFVCSSIQA 346
>gi|95930826|ref|ZP_01313557.1| Mammalian cell entry related [Desulfuromonas acetoxidans DSM 684]
gi|95133068|gb|EAT14736.1| Mammalian cell entry related [Desulfuromonas acetoxidans DSM 684]
Length = 550
Score = 73.0 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/453 (8%), Positives = 108/453 (23%), Gaps = 35/453 (7%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEV-----------------IIRIPGSVDG 51
+G +S L Y + I
Sbjct: 108 RIGASGISGLGTLLSGAYIELSPGSGSAGHDHFKGLNEPPLTPANTPGLHVTLIGTDQTS 167
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L++ V + G VGR+ D + + + P T R +GI
Sbjct: 168 LNSGEPVLYRGFEVGRVEKTAFDTNKRQ---IRFSLFINAPYDDLITENTRFWNASGIAV 224
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + E +S H
Sbjct: 225 KMDAEGVRLNSESVESLLIGGVSFALPDNLPPGGAVDDGREFLLYPDKESINHTSYKHTA 284
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
L + + I K++ + + + +
Sbjct: 285 DYLLLFDSSVRGLLPGAPVTYRGLEIGKVVGISFDYLPEENLYLDNDYKMVPVLIRLTPA 344
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
I Q ++ K + T + + + + +D
Sbjct: 345 ALTGNDTPQTIAAMQQRLEDSIAKGLRATLKTGNLLTGSLYISLDFLDHPPE--ADLQHI 402
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + I + T+ + ++ ++ ++ + +
Sbjct: 403 AGYVVLPTLSGGFDQIQNKITQLLDTINN-----LPLKETVLSADSTLKSIGSAATQADQ 457
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
++++++ + ++ +L + + + R + S +
Sbjct: 458 VLAELDQLLGDEDTQNLPLELRNTLENLRHNLGGLAGDFSS--------GSPFYRKLNGN 509
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ +LQ+T++ D P ++++
Sbjct: 510 LDQLQKTLHSVDQLSVQLATQPSELLFSDPLPE 542
>gi|306797806|ref|ZP_07436108.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu006]
gi|308341896|gb|EFP30747.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu006]
Length = 369
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|118616798|ref|YP_905130.1| MCE-family protein Mce1D [Mycobacterium ulcerans Agy99]
gi|118568908|gb|ABL03659.1| MCE-family protein Mce1D [Mycobacterium ulcerans Agy99]
Length = 535
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/339 (7%), Positives = 88/339 (25%), Gaps = 12/339 (3%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
++ L + Y ++ S + L V+ G+ VG+I +
Sbjct: 20 VIIGSLVLVLGLVAAFVGLKLYQKLTNNTVVAYFPSANALYPGDKVQIMGLQVGKIDNIE 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + + +A I L I+L K + A
Sbjct: 80 PAGD---KMKVTFHYQNKYKVPANASAVILNPTLVASRTIQLEPPYKGGPVLADNAVIPL 136
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+R + P + ++ N K+ + + + + +
Sbjct: 137 ERTQV---PVEWDELRNSITNIIDKLGPTKDQPTGPFGEVLESFANGLEGKGKQINTTLD 193
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++S ++ + + L + + + +
Sbjct: 194 SLSRALIALNEGRGDFFA------VVRSLALFVNALHQDDKQFVALNQNLADVTGRLVGY 247
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
S+ + + + + + + +++ + + L + + +
Sbjct: 248 DRDLSNALQQFDSLLSTVRPFLDKNREVLTYDVNNLAEATNTLLQPDPLNGLETALHVLP 307
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
++ S + I + + I + + +
Sbjct: 308 TAASNVNHIYHPAHGSVVAVPEITSFANPMQFVCSSIQA 346
>gi|255076347|ref|XP_002501848.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
gi|226517112|gb|ACO63106.1| ATP-binding cassette superfamily [Micromonas sp. RCC299]
Length = 392
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 44/119 (36%), Gaps = 5/119 (4%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF++ + + +I W+ N + + P G+ ++VR G+ VG ++
Sbjct: 108 VGLFILGGISLTALTIQWILGLNFNKLRSYQAFVEFPF-ACGIQVGTTVRVRGVKVGNVL 166
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ E + D + ++ GL T I+++ K +
Sbjct: 167 SVRPSLE---KVEVLIEMDDDGIVIPRNSLVEANQSGLIAETIIDITPELPIPKAQWGP 222
>gi|226364098|ref|YP_002781880.1| Mce family protein [Rhodococcus opacus B4]
gi|226242587|dbj|BAH52935.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 404
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/285 (13%), Positives = 83/285 (29%), Gaps = 8/285 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
LF V I + + + + + G+ V G+ VGRI +
Sbjct: 15 LFAVMIAVALVGLL----TAAWIENHSVNHVTAYFRNTTGMYVGDRVMILGVEVGRITTI 70
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
D E + + + A + L YI+L+ T+
Sbjct: 71 EPDGE---RVRVEFDYDNEYDVPADAKAAVVAPTLVTGRYIQLAPAYSGGPTLSDGDEIP 127
Query: 132 -NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
++ A+ + +E+ + + + + + L T + + T L
Sbjct: 128 LDRTAVPVEFDEIKKQVVKLSEDAGRTPEHPDGSLNRFVSSTAHTLDGTGSALHDSLTHL 187
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
++ + ++ T + T +D A +N +
Sbjct: 188 SDAATTLNASGEALFGTVENLQKFTTALAASDQQIRAFSGELANVSGLLNANRTELDALL 247
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ + + +V V D R + I LL D + S
Sbjct: 248 SSMLTTFQEVTKFVEDNRGALVENTGQLETITRLLVDRQDTLMSI 292
>gi|134098924|ref|YP_001104585.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|133911547|emb|CAM01660.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 318
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/102 (22%), Positives = 33/102 (32%), Gaps = 9/102 (8%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG V++ + S G G GL VR G+ VG +
Sbjct: 1 MVGALVMT----LIGLGTFFSDELPAIGGGTTYTAEF-GEAAGLKPGDEVRVAGVKVGEV 55
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ LD + D L T+A+IR + L G
Sbjct: 56 RDVALDG---ARVRVAFRV-RDAWLGDRTSASIRIKTLLGQK 93
>gi|326383095|ref|ZP_08204784.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198231|gb|EGD55416.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 413
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 96/287 (33%), Gaps = 6/287 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VG+ V I + R Y ++ + GL T V G+ VG +
Sbjct: 27 VGIIGVLITAMVVIMAMQMDRL-PYLSQISTYGVYF-DDAGGLVTGDVVLVAGVNVGTVE 84
Query: 70 GLFL-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
G+ L D + + + + T A I+T+ + G + ++ + + +
Sbjct: 85 GISLEDTDEGLKARVDFRLNDTVVMGDRTRAAIKTETVLGRRNLTITPIGTGRIKPGESI 144
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + + A + +++ + + + ++ + + +S
Sbjct: 145 PVDATVSPYSLSDALEDATTTLATTDTDQLNKALETLTETFSKTPANVSGAVEGVSRLSK 204
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+A+ + + +++ + ++ + + I + + Q+++ +
Sbjct: 205 AIADRDNALSELLRRARGVTEVVGQRSNQIRDMLVDANALLGELNIRREALRQVIKGTKD 264
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + ++ F V ++ +F + +
Sbjct: 265 VTAEIT---GFIEDNNEQLKPVLDKFNRVLDILNDNEDNFGKAIDNL 308
>gi|90577616|ref|ZP_01233427.1| putative paraquat-inducible protein B [Vibrio angustum S14]
gi|90440702|gb|EAS65882.1| putative paraquat-inducible protein B [Vibrio angustum S14]
Length = 547
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/406 (8%), Positives = 102/406 (25%), Gaps = 31/406 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ L+ V ++G VGR+ D ++ +
Sbjct: 161 VVLTSHEAGKLAVGDPVLYDGFTVGRVEKTSFDINNKQA-------NYQLFIFEPYNRLV 213
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
RT + + E + + E + + +
Sbjct: 214 RTTSNFIMQSGMNVQMGAEGFNVKIGSLES---------LITGGVTFKTPSDEQGVVQNK 264
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++ ++ + + +I + + +
Sbjct: 265 QLKHYRLFDSAQDYHAKMYDKSLKFVMLFKESIRGLKAGAPIEYRGIQIGTVQKVPLRLP 324
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + N + + +R T +T + +
Sbjct: 325 TSEEGFTSEEIPVLVRIDLGRVYNHSDEGTLESLRAYLEKEFKNGLRATLKTGNLLTGAL 384
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ---KIISTINTIENI 338
+ + K + + S + + + + T+N++
Sbjct: 385 YIGTDVYKGEKPEKPLKYDDYEVFPTKSGGLAEVQKQLTNLLNKFNKLPVEDTLNSMTAT 444
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ A + ++ I K+ +L D + ++ ++T + +
Sbjct: 445 LKASEKTMNSAARVTQDLDRILKQKDTQTLPSDIKASLKEIQNTLNGFSPNAAA------ 498
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++Q + + ++ + L P +V+G EK
Sbjct: 499 ------YQNLQGALVQFEQVMTELQPVLRQLNEKPNSLVFGDEKAK 538
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/207 (12%), Positives = 58/207 (28%), Gaps = 17/207 (8%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------DQEYPNHSLAKALIR------ 88
++ S+ GL + + + GI +G + + L + I
Sbjct: 289 FVMLFKESIRGLKAGAPIEYRGIQIGTVQKVPLRLPTSEEGFTSEEIPVLVRIDLGRVYN 348
Query: 89 -PDTPLYPSTTATIRTQGLAGITYIELS----TLRKEKKTIFQIATERNQRAMITATPSG 143
D S A + + G+ + T T + +
Sbjct: 349 HSDEGTLESLRAYLEKEFKNGLRATLKTGNLLTGALYIGTDVYKGEKPEKPLKYDDYEVF 408
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
AE + + ++ + +E+ +T T+ E A +D+++
Sbjct: 409 PTKSGGLAEVQKQLTNLLNKFNKLPVEDTLNSMTATLKASEKTMNSAARVTQDLDRILKQ 468
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKM 230
SD K + I + +
Sbjct: 469 KDTQTLPSDIKASLKEIQNTLNGFSPN 495
>gi|50085794|ref|YP_047304.1| paraquat-inducible protein [Acinetobacter sp. ADP1]
gi|49531770|emb|CAG69482.1| paraquat-inducible protein [Acinetobacter sp. ADP1]
Length = 557
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/402 (8%), Positives = 107/402 (26%), Gaps = 39/402 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L ++ ++ Q
Sbjct: 191 DDLGSLDVGSPIYYRRINVGQITAYNLSKDGK---------------------SVELQTF 229
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T + N T S + + S++
Sbjct: 230 VRSPYDKFVTTDARFWQASGVDVTLNASGFNLDTQSLASIVAGGIAFGYPESSNAGVANN 289
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
N+ + + + + +H + + +I +
Sbjct: 290 HSHFNLFDSRSDAMKEPDGRPRHIIMYFNHSLRGLSAGAPIDFMGIEIGNVKSINVEFNA 349
Query: 227 LDKM--IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
++ + +++ ++ N + S +R + +D
Sbjct: 350 QYTQLRMRVEAVIYPSRLAHGKELDPNGEIFRSFIQQGWRAQMRTGNLLTGQNYIALDKF 409
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ + A + + + + + ++ + +N+N
Sbjct: 410 PKAKPASLIMHADGAAEVPTTPTELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLNNMNT 469
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ A + D +R M + +
Sbjct: 470 TIESTDKLVKQLDGKVA-PGFQATLDDVRRTMQSSQSILSS---------------DAPM 513
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
D++ ++++ + E++P+ ++ G+ + +
Sbjct: 514 QQDVRRALQQMTRAAASLQLMADYIEQHPESLIRGKTPEADR 555
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 18/101 (17%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DG +I+ S+ GLS + + F GI +G + + ++ + +R + +Y
Sbjct: 307 DGRPRHIIMYFNHSLRGLSAGAPIDFMGIEIGNVKSINVEFNAQYT---QLRMRVEAVIY 363
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
PS A + G + + + + Q
Sbjct: 364 PSRLAHGKELDPNGEIFRSFIQ-QGWRAQMRTGNLLTGQNY 403
>gi|300774196|ref|ZP_07084063.1| ABC superfamily ATP binding cassette transporter, permease protein
[Sphingobacterium spiritivorum ATCC 33861]
gi|300758875|gb|EFK55704.1| ABC superfamily ATP binding cassette transporter, permease protein
[Sphingobacterium spiritivorum ATCC 33861]
Length = 337
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/305 (13%), Positives = 96/305 (31%), Gaps = 3/305 (0%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E+K VGLFV+ L I L + V V GL ++V F+
Sbjct: 5 ENKRT-LVVGLFVLIGLIILIAGILTLGGQQKKFTKTLTVTTEF-EDVKGLKVGNNVWFS 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG + + + + + + A + + GL G + I L +
Sbjct: 63 GVKVGIVKDISFESIKYVKVVMSIEAKSSEFIRKDAVAKLGSDGLIGNSIITLVGGSQTA 122
Query: 122 KTIFQIATERNQRAMITA-TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ I + + + ++ N ++ + S+++ + LT +
Sbjct: 123 QPIEDGDILHSAKGTDMEAMMATLSVNNDNLVEITRNFAVLSQNLVDGKGMVGAMLTDSS 182
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ ++ N + + + ++ N I L T +
Sbjct: 183 MVVSLSKSLDNLNKLMTNANQASNNLVAVTNKLNNNQGLIHQLSTDTAVFASLRESAAQL 242
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q + + + + ++ +N ++V E +I +L + + + +
Sbjct: 243 QGVTQTASALMSNLNATSARLNDKNNVVGALTNDPEGAAEIKQILRNLNLSTAKLDQNME 302
Query: 301 LENIA 305
Sbjct: 303 AMQSN 307
>gi|209516510|ref|ZP_03265365.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
gi|209503114|gb|EEA03115.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
Length = 553
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/461 (9%), Positives = 126/461 (27%), Gaps = 59/461 (12%)
Query: 3 SKNYYTSV--------GLFVVSILFFSFFSIYWLSRSN---------------QYDGPMA 39
++ V G+ + L + + RS P
Sbjct: 124 TRGTRFWVVRPRVGANGISGLGTLLSGAYIGVDIGRSAERQSAFLGLENPPIVTTGQPGR 183
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ +R S+ + + + ++ + VG++VG LD+ + + P
Sbjct: 184 QYTLR-GESLGSIDIGAPIFYHRVQVGQVVGYSLDRGGEG---VTVQVFVNAPFDQYVGT 239
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
R +G+ S+ K + A + S
Sbjct: 240 NTRWWHASGVDLRLDSSGLKLNTQSLATVVVGG--------LAFQTPPGQGAGQPAADKS 291
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ E + ++ ++ + +
Sbjct: 292 VFRLAADEADAMREPDGVPLTVVMRFDQSLRGLSVGAPVDLRGIVLGQVTDIGIEYDDTH 351
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
T + + ++ + L + + + +R + ++
Sbjct: 352 KTFSMKVSMALYPDRLSRRSSDALPAPDSPGGHELLEHLVMEGLRGQLRTGSLLTGQLYV 411
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+D + + L + ++ ++ ++ I +Q + I
Sbjct: 412 ALDMFPKAPRASVDVHRNPIELPTVPNTLDELQVQVADIARKLNQVP--------FDRIG 463
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+NLN + + L ++ + A+ + + T +
Sbjct: 464 ANLNGALENANRLFGHMD--------TEVVPQARDTLAAAQRTFSTAESTLRGAAP---- 511
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D+Q+ +++L T+ + + ERNPQ +++G+
Sbjct: 512 ----MQSDVQDAMQQLTRTLQSLNALADYLERNPQALLFGK 548
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 8/94 (8%), Positives = 29/94 (30%), Gaps = 10/94 (10%)
Query: 2 ESKNYYT--SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSV 58
E++ + + L + + + V+ + +G+ + V
Sbjct: 34 ETRKRWLPSLIWLVPLICALIGVALV------ARSVAEKGPVVTVTFNNAEGMEAGKTKV 87
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
R+ + +G + + L + + + +
Sbjct: 88 RYKDVEIGSVQAITLSGD-LRRVIVSIQLSKEAE 120
>gi|320353356|ref|YP_004194695.1| Mammalian cell entry related domain-containing protein
[Desulfobulbus propionicus DSM 2032]
gi|320121858|gb|ADW17404.1| Mammalian cell entry related domain protein [Desulfobulbus
propionicus DSM 2032]
Length = 543
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/398 (9%), Positives = 112/398 (28%), Gaps = 27/398 (6%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
++ L S V + I VG++V L + + I+ T T T+
Sbjct: 171 DTLGSLDIGSPVYYRQIQVGQVVSYTLKPDGKS-----VEIKIFVQAPHHTQVTNNTRFW 225
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+ + K + + + ++ ++ +
Sbjct: 226 NASGFDLTLNAQGLKVDTQSMVSILTG------------GIAFDLPKETQPGEEAQENSS 273
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ + I +L + + ++ DL +
Sbjct: 274 FFLYADRNAIQEKKYTIRNYYVLLFDESVRGLSVGAPVELYGIKLGEVVDLKLEFDLDSK 333
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + ++ + + + + + + Q L+
Sbjct: 334 KFFVPVIVAMEPERISAAKKEEALKIAEHDPGTFLKALVEQQGLRAQLQSGNLLTGQLMV 393
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + + S N + + S ++E + + + + I L +
Sbjct: 394 NLVFVSDAPKASLSDWNGFKAIPTIPGSFERLQESLGKITASLEKVK-FDQIGGELQQTL 452
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
Q+ ++++ + + ++T ++ + + + + S
Sbjct: 453 QETRTTVAEMGGFAKQLN--------KETTPKLQETLVELQKTLVEVQQGMGKDSPLNY- 503
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + +L T+ + N + PQ I++G+EK +
Sbjct: 504 NTTKTLEELSMTLRALRELANTLDNQPQSILYGKEKQA 541
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/278 (10%), Positives = 74/278 (26%), Gaps = 24/278 (8%)
Query: 24 SIYWLSRSNQYDGPMA---EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+ R+ + ++ SV GLS + V GI +G +V L L+ + +
Sbjct: 274 FFLYADRNAIQEKKYTIRNYYVLLFDESVRGLSVGAPVELYGIKLGEVVDLKLEFDLDSK 333
Query: 81 ---SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ +A + + L + +
Sbjct: 334 KFFVPVIVAME-----PERISAAKKEEALKIAEHDP-------------GTFLKALVEQQ 375
Query: 138 TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI 197
+ + + + S + + TI I+
Sbjct: 376 GLRAQLQSGNLLTGQLMVNLVFVSDAPKASLSDWNGFKAIPTIPGSFERLQESLGKITAS 435
Query: 198 DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSS 257
+ + Q+ + T + K + K+ + L +Q + +
Sbjct: 436 LEKVKFDQIGGELQQTLQETRTTVAEMGGFAKQLNKETTPKLQETLVELQKTLVEVQQGM 495
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ ++ +T + + + L + ++ +S
Sbjct: 496 GKDSPLNYNTTKTLEELSMTLRALRELANTLDNQPQSI 533
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/461 (8%), Positives = 115/461 (24%), Gaps = 39/461 (8%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ ++ V + + L + + + I S DGL + ++F
Sbjct: 19 RRRFSIVWIVPLVALVIGGWLAFKA-----ISEKGPTITITF-ASADGLEAGKTKIKFKD 72
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT-----------------ATIRTQG 105
+ +G++ + L ++ + +I+ P T T+ +
Sbjct: 73 VEIGQVETIALSEDVSKVVVTAKMIKGSEPYLTDQTKFWVVRPRISGGSVSGLGTVLSGA 132
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
GI + T + + + + + +
Sbjct: 133 YIGIDGSKAGTPTRHFTGLEVPPVVTVGQPGRHFVLQADTLGSLDIGSPVYYRQIQVGQV 192
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ ++ N + T ++ K ++ ++T
Sbjct: 193 VSYTLKPDGKSVEIKIFVQAPHHTQVTNNTRFWNASGFDL-TLNAQGLKVDTQSMVSILT 251
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT-----------QTF 274
+ Q + EN + + T+ +
Sbjct: 252 GGIAFDLPKETQPGEEAQENSSFFLYADRNAIQEKKYTIRNYYVLLFDESVRGLSVGAPV 311
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ G K+ ++ + +A + ++ +
Sbjct: 312 ELYGIKLGEVVDLKLEFDLDSKKFFVPVIVAMEPERISAAKKEEALKIAEHDPGTFLKAL 371
Query: 335 IENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--RAMHTFRDTSEKINRYIPS 392
+E S +N + + D +A+ T + E++ +
Sbjct: 372 VEQQGLRAQLQSGNLLTGQLMVNLVFVSDAPKASLSDWNGFKAIPTIPGSFERLQESLGK 431
Query: 393 IGNNLQNFS-QSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
I +L+ ++Q +++ + TV +
Sbjct: 432 ITASLEKVKFDQIGGELQQTLQETRTTVAEMGGFAKQLNKE 472
>gi|302523962|ref|ZP_07276304.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302432857|gb|EFL04673.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 331
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/289 (13%), Positives = 88/289 (30%), Gaps = 8/289 (2%)
Query: 1 MES--KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+S K + L ++++ + G GL D+ V
Sbjct: 4 MKSFQKRNPIPIALVGIAVMALGLVAAMNSEDLPVIGGGTT-YSADFSE-AAGLQKDNDV 61
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG++ + LD ++ D + TTA I+ + L G Y+ L
Sbjct: 62 RIAGVKVGKVSDIKLDG---ASVKVSFKVK-DAWMGDKTTAAIKIKTLLGQKYLALDPQG 117
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + + ++S S I + N + +
Sbjct: 118 NGNLDPGSPIPRDRTMSPYDVLDAFRGLSQTVDAIDTNQLSKSFEAITQTFSNTPQDVKG 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++ + +S +A S + ++ T+ + ++ + Q
Sbjct: 178 ALSGLSKLSDTIAKRDSQLANLLANTRQVSQTLVDRDAEVQKLITDGNQLLDEIGKREQA 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ +L+ + S D ++ V + Q+ L+
Sbjct: 238 IKTLLDGSKQLSTQLQGLIDDNDGQLNPVLTQLDQLTSMLQRNQDSLAQ 286
>gi|41408288|ref|NP_961124.1| hypothetical protein MAP2190 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396644|gb|AAS04507.1| hypothetical protein MAP_2190 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 341
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/282 (12%), Positives = 81/282 (28%), Gaps = 11/282 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F +L + + + +GP L T SVR GI VG
Sbjct: 9 VKFGVFAAVMLMLTTSLFFIFGQFR--NGPTHSYSAVFID-ASQLKTGDSVRVAGIRVGT 65
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ G+ L + A D L T A +R L G Y+EL + + +
Sbjct: 66 VNGIALQPDNKVVVDFDAD--DDVALTTGTRAAVRYLNLVGDRYLELIIGPGSMRVLPEG 123
Query: 128 ATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ M + + + ++ + + Q + ++ L T +
Sbjct: 124 SQISIDHTMPSLDLDLLLGGLKPVIQGLNPQDVNALAGALLQVFQGQGQTLQSLLAKTSS 183
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
++ + ID + + + + + + +
Sbjct: 184 FSNDVAGKNKAIETLIDNLNTVVRTLSDQGSQFSGAIERLQRLVTDLAHDRDPIGDAIQA 243
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ ++ + + TV + + ++D
Sbjct: 244 LATGTASVTDLLSAARPPLSGTVDQLNRLAPLLEHGKGRLDD 285
>gi|289762123|ref|ZP_06521501.1| MCE-family protein mce3C [Mycobacterium tuberculosis GM 1503]
gi|289709629|gb|EFD73645.1| MCE-family protein mce3C [Mycobacterium tuberculosis GM 1503]
Length = 410
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|318059759|ref|ZP_07978482.1| secreted protein [Streptomyces sp. SA3_actG]
Length = 454
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/390 (11%), Positives = 104/390 (26%), Gaps = 17/390 (4%)
Query: 11 GLFVVSILFFSFFSI------------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
G V L + + L V + V L S V
Sbjct: 16 GAAAVLALCLTLGIVPVPALGFDGIEDLPLPGGADLGPHPYTVTADMKD-VLNLVPRSDV 74
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ N + +GR+ + L + + I D L T A + L G Y++L
Sbjct: 75 KVNDVTIGRVTAISLA-DDGWTARVTLRINGDVRLPSGTGARLEQSSLLGEKYVQLVEPE 133
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKIIENIEKPL 176
+ R + +S ++ + + K + E +
Sbjct: 134 DGGGRLRSGDRIPLSRTARDTEVEEVFGALSLLLNGGGVNQLKSITTELNKAVGGRESQV 193
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQV-TPHSSDSKNTFNTITDLITSLDKMIKAID 235
+T+ ++T+ T L ++ S I + + + K + D + K ++
Sbjct: 194 RSTLRRVDTLVTDLDDHRSDITAALDAVNRLSATLAHRKQDVGAVLDDLAPGLKTLEEQR 253
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + V D++ + + + L +
Sbjct: 254 GSLMTMLRSLDRLQDVAVDTIDRSKADMVADLKALAPSLRSLADAGKDLPDSLQVLLTYP 313
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
T L + N I+A T + + +
Sbjct: 314 FTDEVLNGVHGDYLNAYLHITAADGTTLIPPLAPEDPDDGAGAPGGPTPGGDTLRKSAGE 373
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEK 385
+ ++ + A + + S
Sbjct: 374 PSGKKGATDDEASKGTAPQDTASRSTASRS 403
>gi|282866019|ref|ZP_06275067.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
gi|282559058|gb|EFB64612.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
Length = 338
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/270 (12%), Positives = 78/270 (28%), Gaps = 12/270 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ G S GL T VR G+ VG + G+ LD ++ D +
Sbjct: 37 FVGGGTTYSADFTESA-GLDTGDEVRIAGVKVGEVTGVSLDG---GTVKVDFRVK-DAWI 91
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
S+T I + L G Y+ + + + R + T S + +
Sbjct: 92 GDSSTVGIAIKTLLGEKYLAV-------DPLGDAPQDPGSRITVGRTTSPYDVTQAFDGL 144
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + E I + + ++ + + L+ + + S
Sbjct: 145 GETIEEIDTAQLAQSFETISETFKDSPPDVRSAAEGLSALSKTVSERDAQLATLLAGSKR 204
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ ++I + Q+ V D + +
Sbjct: 205 LTKTLATRKSSFETLLEDGNLLLGEIQARRDSIHLLLTGTRDLGTQLTGLVTDNNKQLRP 264
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ +L + + A N
Sbjct: 265 TLDSLSRVTGVLVKNRKSLDKVLSLAGSYN 294
>gi|302525037|ref|ZP_07277379.1| secreted protein [Streptomyces sp. AA4]
gi|302433932|gb|EFL05748.1| secreted protein [Streptomyces sp. AA4]
Length = 327
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 85/282 (30%), Gaps = 7/282 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+ L R G GL D VR GI V
Sbjct: 8 NPLVLGVVGSVALAAVLTGTLNYHRLPFLGG--TTYQAEFTE-AAGLQADDEVRIAGIKV 64
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + + L + H L ++ + T+A I+ + L G ++ L + ++
Sbjct: 65 GEVSEVDLADD---HVLVSFRVK-HAWIGDRTSAQIKIKTLLGRKFLALDPAGRAEQNPD 120
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
Q T + + +K+++ S I N + + T + +
Sbjct: 121 QPIPRARTVTPYDVTDAFNGLADTAGAIDTKQLATSFSTISDTFRNSPQHVRTALDGLSA 180
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S +++ + I +++ + + + N L ++Q+L
Sbjct: 181 LSKTVSSRDNEIAELLANARKLTTTIANSNDDFEKLVKDGDLLLTELDHRRDAIHQLLVG 240
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
Q + + ++ Q+ D L+
Sbjct: 241 TQQLAKQLSGLVADNTAQLAPALRQLNQVTDLLQRQDANLAQ 282
>gi|182434829|ref|YP_001822548.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178463345|dbj|BAG17865.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 339
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/277 (12%), Positives = 76/277 (27%), Gaps = 12/277 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
W + S + G S GL+ VR G+ VG + G+ LD
Sbjct: 30 WRADSLPFVGGGTSYSADFTESA-GLTDGDEVRIAGVKVGEVTGVSLDG---AKVRVDFR 85
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
+ + + S+T I + L G Y+ + + + R + T S +
Sbjct: 86 VE-NAWIGDSSTVGIAVKTLLGEKYLAV-------DPLGDAPQDPGSRITASRTTSPYDV 137
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + K E I + ++ + + L+ + +
Sbjct: 138 TQAFNGLGETIGEIDTAQLAKSFEAISTTFKDSPPHVRSAADGLSALSRTVSERDAQLAT 197
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S + + L ++ ++I + Q+ V D
Sbjct: 198 LLRDSKKLTKTLAGKNSSFETLLKDGNLLLGEIRARRDSIHLLLTGTRDLGTQLTGLVRD 257
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ +L + +
Sbjct: 258 NDKQLGPTLASLGRVTAVLVKNRKSLDKVLAMTGSYS 294
>gi|229588434|ref|YP_002870553.1| putative ABC transporter substrate-binding protein [Pseudomonas
fluorescens SBW25]
gi|229360300|emb|CAY47157.1| putative ABC transport system, substrate-binding protein
[Pseudomonas fluorescens SBW25]
Length = 155
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTVEIGVGLFLLAGILALLLLALRVSGLSASPTADTYKLYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSFTG-RVTMQLDKKVDNLPTDSTASILTAGLLGEKYIGVSVG 117
>gi|262203806|ref|YP_003275014.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262087153|gb|ACY23121.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 419
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/266 (11%), Positives = 70/266 (26%), Gaps = 6/266 (2%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ + SV L VR G+ VG++ + +
Sbjct: 24 GYTVFTRATTKTFTAYFASVTSLYKGDPVRVLGVNVGKVDEITP---RRGDVKVVLQVDK 80
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ P+ A I Q L +++L+ + + + AT +R A P +
Sbjct: 81 NVPIPSDAMAVIVAQSLVSGRFVQLTPVYSKGGEMADGATIPMERT---AVPMEWDDIKK 137
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+K + + + + I N I+ + + +
Sbjct: 138 QLTRLTKAVGPQADNDGAAVAAINTFDANLAGNGAAINNSITQMSDVLGTLAAGRGDLFA 197
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ + + + +N ++ SD + +
Sbjct: 198 TIQNLQKLTDALSQSHEQLVQFNGRIASVSSILAQNTTELNDALHGVSDAMTEVRTFIER 257
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSK 295
E Q++ L + K +
Sbjct: 258 NGAAITESSQRLATTLRIVADKDEQL 283
>gi|308369575|ref|ZP_07418318.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu002]
gi|308327135|gb|EFP15986.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu002]
Length = 358
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|289645124|ref|ZP_06477148.1| virulence factor Mce family protein [Frankia symbiont of Datisca
glomerata]
gi|289505064|gb|EFD26139.1| virulence factor Mce family protein [Frankia symbiont of Datisca
glomerata]
Length = 351
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/348 (10%), Positives = 94/348 (27%), Gaps = 10/348 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T + L ++ + + +++ G GL V+ G +
Sbjct: 9 NLTVIALVGIAGTLLAIAGTFQVAKLPFIAGDSYT--AHFTE-AGGLQPGDPVKVAGTQI 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ G+ LD + L +TTA I+T L G Y+ L
Sbjct: 66 GKVTGVGLDGPD---VKVTFTAK-HVRLGDATTAQIKTNTLLGARYLSLVPRGDRPLGGG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
A + T + + +++++ + + + + +
Sbjct: 122 GDIPVARTTAPYSITQGLDDVSGQVGQVDTEQLAQALSTFSDAFRDTAGDIGPAMDGLTR 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S + + I ++ T + T L + ++++L N
Sbjct: 182 LSETIGSRDQAIRELFARTGSVTEVFRQRTRQITTLMLDGNSLLAELESRRASLHRLLVN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
++ V + ++ + + S+ S + +
Sbjct: 242 TTAVADQIS---GLVTDNNQQLKPALTELNATLELLRRNQSNIVSAVSQVASFITGFGEG 298
Query: 306 DSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
++ ++ I L + +L+
Sbjct: 299 VASGPWFQGSLDAAVGAVGTHDLVPQIPLPAGQPQPLTPTLPSLGDLL 346
>gi|255531765|ref|YP_003092137.1| Mammalian cell entry related domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255344749|gb|ACU04075.1| Mammalian cell entry related domain protein [Pedobacter heparinus
DSM 2366]
Length = 316
Score = 72.7 bits (175), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/302 (13%), Positives = 85/302 (28%), Gaps = 17/302 (5%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T VG+ + +L + + + R P VDGL V NG
Sbjct: 4 ANETKVGILAAFSITLLIIGYNFLKGNAIFSNETV-LYARYPR-VDGLGVSKPVLINGFQ 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+GR+ L L + LA I+ + ++ A + L G I + +
Sbjct: 62 IGRVDKLQLQSDGS--ILATLKIKGKYEIPKNSIAKLEGTDLLGSKAIVMELGTGQDFAQ 119
Query: 125 FQIATERN-------QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
N + I + + + I + + T
Sbjct: 120 DGDTLNANVAKGLLETVQPVQKKAELIITKMDSILTSVNSILNPNFQKNVDKSFNSIAST 179
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ + V SS+ K I ++ ++ + +
Sbjct: 180 LSSLEATSKKVDNLVGSEGSRVSAILANVEAISSNLKKNNEKINGILNNIGNITDQVAAA 239
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVH------DVRETTQTFQEVGQKIDHLLSDFSSK 291
Q +EN + + ++V N + + + + +D+L+ D
Sbjct: 240 NFKQTIENANKAMADLQTIVNKVNNGQGTLGMLVNDTKMYENLNNASKNLDNLMIDLKQN 299
Query: 292 MK 293
K
Sbjct: 300 PK 301
>gi|312959005|ref|ZP_07773524.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Pseudomonas fluorescens WH6]
gi|311286775|gb|EFQ65337.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Pseudomonas fluorescens WH6]
Length = 155
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + + ++ GL+ + V
Sbjct: 1 MQNRTVEIGVGLFLLAGILALLLLALRVSGLSASPTADTYKLYAYFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD++ + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLDRDSFTG-RVTMQLDKKVDNLPTDSTASILTAGLLGEKYIGVSVG 117
>gi|306776200|ref|ZP_07414537.1| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu001]
gi|308215380|gb|EFO74779.1| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu001]
Length = 390
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|296116338|ref|ZP_06834954.1| Mammalian cell entry related domain protein [Gluconacetobacter
hansenii ATCC 23769]
gi|295977157|gb|EFG83919.1| Mammalian cell entry related domain protein [Gluconacetobacter
hansenii ATCC 23769]
Length = 154
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 37/119 (31%), Gaps = 2/119 (1%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ +L + F Y + D + R S +GL + V G+ VGR+ + LD
Sbjct: 14 LVLLVAAGFCAYARASQMGPDRGGRPLTARFI-SANGLKVGADVELGGVSVGRVTSIVLD 72
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + L T+ +I + L + + +
Sbjct: 73 PTTY-MANVGFTVDRAVNLPADTSLSIGSPSLTADMALMVRAGDSKATLSPDAPITDTH 130
>gi|145225114|ref|YP_001135792.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145217600|gb|ABP47004.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 360
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/340 (10%), Positives = 102/340 (30%), Gaps = 10/340 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
G + + + + L + GL+ + V+ +G+
Sbjct: 7 ASLVRAGF--LGAVLIALVIVVGLQPQQLWAMATSVRYQAVFAE-AGGLAAGNEVKVSGV 63
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + + LD +L + + +TTAT+ + G + L
Sbjct: 64 TVGSVSDVALD---RGSALVTFSVDSAVRVGDATTATVGISTVLGERVLVLKPDGSRSLG 120
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + + T + + + + I+ S + + IE + L T +
Sbjct: 121 SMGVIPLTRTGSPYSLTDAVGEFTTNTEGTDTAAINQSLDTLSETIERVAPQLGPTFDGV 180
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+S L + + ++ + + + + + + A+ + I+
Sbjct: 181 SRLSKSLNSRNESLGALLDAA---ADVTGVLSERSAQVNTLLLNANDLLAVLQDRRYAIV 237
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ + S V + ++ T + V + ++ + S+ +K +
Sbjct: 238 NLLASTTAVAQELSGMVEDNEQELAPTLEKLNTVSEMLERNRDNISASLKGLAKYQVTQG 297
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
A + + ++ Q + +
Sbjct: 298 EAVNNGFFYNGFASNLLPGPAIQPFLDYALGFRRGVNAGQ 337
>gi|126432723|ref|YP_001068414.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126232523|gb|ABN95923.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 528
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 81/291 (27%), Gaps = 6/291 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ GL + IL + G G++ VR G+
Sbjct: 7 SNRLRGGLMGIIILVLVVGVGQSFASVPMLFAKPRY--FAQFGDTGGINPGDKVRIAGVD 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG ++ ++ + + + T + + A IRT + G IE+
Sbjct: 65 VGEVLKTEIEGD---KVVVGFTL-GGTQIGSDSRAAIRTDTILGRKNIEIEPRGSTALEA 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
I + + S + + + +S + + I+ L+ + +
Sbjct: 121 NGILPLGQTTTPYQIYDAFFDLTKSASGWDTTSVRESLNVLSETIDQTYPHLSAALDGVA 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
S + + +++ ++ + V Q+LE
Sbjct: 181 RFSDTIGKRDEQLKQLLANANKIAGVLGERSGQVNALLVNAQTLLAAINERSYAVGQLLE 240
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ S D N + + + ++ L+ ++ K
Sbjct: 241 RVSAFSEQVEGFIDDNPNLNRVLEQLRVISDILVERKFDLVDVLTTLSKFT 291
>gi|54023083|ref|YP_117325.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014591|dbj|BAD55961.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 334
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 50/134 (37%), Gaps = 6/134 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +GLF + + + R D E + +GL VR
Sbjct: 1 MTVRAAAWRLGLFAAVMAVVLALVLAAIQRPVAGDTETHE---ALFTDANGLKVGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + L+Q + + + + TP+Y ++ IR Q L G YI+L
Sbjct: 58 FGVQVGKVERIGLEQ---SMAKVRFTVTTATPIYDNSRLAIRYQNLTGQRYIDLQQEPTP 114
Query: 121 KKTIFQIATERNQR 134
+ A R
Sbjct: 115 GVRLAPGAVVGADR 128
>gi|302529895|ref|ZP_07282237.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302438790|gb|EFL10606.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 351
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/287 (14%), Positives = 84/287 (29%), Gaps = 16/287 (5%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VGL V+ F + + G GL T + VR G+ VGR
Sbjct: 36 ALVGLTVL----ALGFLAALQAPNLPIIGDGTAYAAEFSE-AAGLQTGNDVRIAGVKVGR 90
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + LD + L T+A+IR + + G Y+ L +
Sbjct: 91 VSQVSLDG---ASVRVSFRV-AGAWLGDRTSASIRIKTVLGQKYLAL-------DPVGVG 139
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + + T + + + + + + + + I T A++
Sbjct: 140 SLDPDTPIPRERTTVPYDVLPAFQQLATTVDAIDTTRLAQSFRAISDTFARTPADVRVTL 199
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
T L+ + + + + D + + L +V Q IQ
Sbjct: 200 TGLSRLSDSLSARDAKLAHLLAQTRTVSATLADRDAELTRLLTDGNLLLDEVRQRESAIQ 259
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + +V V D ++ LL + +
Sbjct: 260 SLLDGARRLGAEVSGLVADNDRELGPVLAQLDRLTALLERNRASLAE 306
>gi|254466892|ref|ZP_05080303.1| ABC transporter substrate binding protein [Rhodobacterales
bacterium Y4I]
gi|206687800|gb|EDZ48282.1| ABC transporter substrate binding protein [Rhodobacterales
bacterium Y4I]
Length = 150
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 3/133 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M G V++ + ++ G ++ S++G+S + VR
Sbjct: 1 MSHNPTEVLAGGVVLAAAIAFAVYAGQAAGLSR-AGATYDLSASF-RSLEGVSVGTDVRL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + G+ L+ E + + ++ + + I ++GL G ++E+
Sbjct: 59 AGVKIGTVTGVDLNPETFR-ADTRFSVKQGIEIPDDSAVVISSEGLLGGNFVEIMPGGSA 117
Query: 121 KKTIFQIATERNQ 133
E Q
Sbjct: 118 FAFEPGDEIEDTQ 130
>gi|189347230|ref|YP_001943759.1| Mammalian cell entry related domain protein [Chlorobium limicola
DSM 245]
gi|189341377|gb|ACD90780.1| Mammalian cell entry related domain protein [Chlorobium limicola
DSM 245]
Length = 292
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 56/128 (43%), Gaps = 8/128 (6%)
Query: 1 MES----KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M + K G+F + L F+ + + +++ + + + + V GL+ ++
Sbjct: 1 MRNPNALKWSDLRTGIFFLLGLGFAAYLGLVVGKNSSLFTGVTTIKV-LSQDVQGLAENN 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIE 113
V +G +G + L + + +A+ +R + + ATIR+ G+ G Y++
Sbjct: 60 FVSVSGKKIGTVSKLDFVTNNDSLYVVAELRLRNEFAVLVTKDAKATIRSLGVLGDKYVD 119
Query: 114 LSTLRKEK 121
+ T + +
Sbjct: 120 IITGKGPQ 127
>gi|326775347|ref|ZP_08234612.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
gi|326655680|gb|EGE40526.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
Length = 339
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/277 (12%), Positives = 76/277 (27%), Gaps = 12/277 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
W + S + G S GL+ VR G+ VG + G+ LD
Sbjct: 30 WRADSLPFVGGGTSYSADFTESA-GLTDGDEVRIAGVKVGEVTGVSLDG---AKVRVDFR 85
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
+ + + S+T I + L G Y+ + + + R + T S +
Sbjct: 86 VE-NAWIGDSSTVGIAVKTLLGEKYLAV-------DPLGDAPQDPGSRITASRTTSPYDV 137
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + K E I + ++ + + L+ + +
Sbjct: 138 TQAFNGLGETIGEIDTAQLAKSFEAISTTFKDSPPHVRSAADGLSALSRTVSERDAQLAT 197
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S + + L ++ ++I + Q+ V D
Sbjct: 198 LLRDSKKLTKTLAGKNSSFETLLKDGNLLLGEIRARRDSIHLLLTGTRDLGTQLTGLVRD 257
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
E ++ +L + +
Sbjct: 258 NDEQLGPTLASLGRVTAVLVKNRKSLDKVLAMTGSYS 294
>gi|15609105|ref|NP_216484.1| MCE-family protein MCE3C [Mycobacterium tuberculosis H37Rv]
gi|148661777|ref|YP_001283300.1| MCE-family protein Mce3C [Mycobacterium tuberculosis H37Ra]
gi|148823182|ref|YP_001287936.1| MCE-family protein mce3C [Mycobacterium tuberculosis F11]
gi|215430878|ref|ZP_03428797.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289443452|ref|ZP_06433196.1| MCE-family protein mce3C [Mycobacterium tuberculosis T46]
gi|289447585|ref|ZP_06437329.1| MCE-family protein mce3C [Mycobacterium tuberculosis CPHL_A]
gi|289554255|ref|ZP_06443465.1| MCE-family protein mce3C [Mycobacterium tuberculosis KZN 605]
gi|289754065|ref|ZP_06513443.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|313658858|ref|ZP_07815738.1| MCE-family protein mce3C [Mycobacterium tuberculosis KZN V2475]
gi|2950438|emb|CAA17841.1| MCE-FAMILY PROTEIN MCE3C [Mycobacterium tuberculosis H37Rv]
gi|148505929|gb|ABQ73738.1| MCE-family protein Mce3C [Mycobacterium tuberculosis H37Ra]
gi|148721709|gb|ABR06334.1| MCE-family protein mce3C [Mycobacterium tuberculosis F11]
gi|289416371|gb|EFD13611.1| MCE-family protein mce3C [Mycobacterium tuberculosis T46]
gi|289420543|gb|EFD17744.1| MCE-family protein mce3C [Mycobacterium tuberculosis CPHL_A]
gi|289438887|gb|EFD21380.1| MCE-family protein mce3C [Mycobacterium tuberculosis KZN 605]
gi|289694652|gb|EFD62081.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|326903575|gb|EGE50508.1| MCE-family protein mce3C [Mycobacterium tuberculosis W-148]
Length = 410
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|301167971|emb|CBW27557.1| putative membrane protein [Bacteriovorax marinus SJ]
Length = 456
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/296 (8%), Positives = 77/296 (26%), Gaps = 4/296 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL ++ + + ++ + G I G+ + ++ GI
Sbjct: 2 NEFKIGLMAIATMVMVAYMSLKITSNQSGFGEYVTYRT-IVTDASGIFPKTPIKIAGINA 60
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
GRI + L +L + + + + ++T G G YI++ +++
Sbjct: 61 GRIKKIELQGN---QALITFEVLENVIVVKDSKLQVKTVGFLGDKYIQIQMGESQERLTA 117
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
++ A + + + + + K + +S ++ +
Sbjct: 118 NSFIVSDEGAGVEKLVKDASDVLKDVKVMMKTLRESISPEGEVSPVKRILNDFAVVAENA 177
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ + + TD M + +
Sbjct: 178 RIATDSLKTVIKGNEEKMNNLIANLERFSEQIAYHTDDQEQDSAMKDLRKILANADAMTA 237
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+K + + E ++ ++ ++ S
Sbjct: 238 DLKDLVADIKVGKGTLGKILVEEEIADEVKQTLSSVNKIVGRVSDIRTELSGYMGA 293
>gi|226364099|ref|YP_002781881.1| Mce family protein [Rhodococcus opacus B4]
gi|226242588|dbj|BAH52936.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 333
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/292 (10%), Positives = 82/292 (28%), Gaps = 16/292 (5%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+GL ++L F G GL+ + + G+ VG
Sbjct: 11 AFRMGLIGTAVLIGVLFLALNFKSIPGISGATT-YHAEF-ADASGLAVGDTTQIAGVKVG 68
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
+ L + + + L TTA I+ + G Y+E++ R +
Sbjct: 69 EVKELSISG---GKVDVEFDVDSGAVGLGDDTTAAIKVETALGRRYVEITPGRHGELADN 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ T + +E + +S + + + + + L +++ +
Sbjct: 126 ATIPLAQTSSGYDITRALEEVTDKVSETDTVNLSGALEQVSSVEDELPPDLRSSLDGLSR 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S +++ + +++ + I + +
Sbjct: 186 LSETVSSRDEELRRLLAGA----------ADVSKILADRDGQVSALFGQGQSLFAALNNR 235
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
V+S R+ T ++ L++ +S +
Sbjct: 236 ADTIHRVLVQSRQVADALTGLSRDNAATLGPTLDQMKTLVATLNSNYDNINA 287
>gi|254823476|ref|ZP_05228477.1| hypothetical protein MintA_26338 [Mycobacterium intracellulare ATCC
13950]
Length = 510
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/412 (11%), Positives = 113/412 (27%), Gaps = 43/412 (10%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ +G V+ L + W Y+ ++ + + L V+ G
Sbjct: 16 SRAS-VIIGSLVIV-LALVVGYVGW----RLYEKLTNNTVVAYFPAANALYPGDKVQIMG 69
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG I + + + + +A I L I+L K
Sbjct: 70 LRVGAIDKIEPTGD---KMKVTFHYENKYRVPANASAVILNPTLVASRAIQLEPPYKGGP 126
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ A +R + + + + I K+ E+P
Sbjct: 127 VLADNAVIPEERTQVPV-------------EWDQLRNSITNIISKLGPTAEQPKGPFGEV 173
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
IE+ + LA + + + + +L D + +
Sbjct: 174 IESFANGLAGKGKQFNTTLSNLSQALTALNEGRGDFFAVVRSLALFVNALHQDDAQFVAL 233
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL----LSDFSSKMKSKETS 298
+N+ + + + N + T + K + +++ + +
Sbjct: 234 NQNLADFTTRLAHNDTDLSNAIQQFDSLLTTVRPWLDKNAGVLTYDVNNLETATNALLQP 293
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
L + + + ++ + I +I + I +I N + + +
Sbjct: 294 DSLNGLETALHVLPTAAANINQIYHPSHGSVVAIPSITNFANPMQFICSAIQA-----GS 348
Query: 359 ISALKENNSLFKD-AQRAMHTFR-----------DTSEKINRYIPSIGNNLQ 398
+E+ L + + T+E + + + LQ
Sbjct: 349 RLGYQESAELCAQYLAPILDAIKFNYPPFGLNLFSTAETLPKQVAYSEPRLQ 400
>gi|89092166|ref|ZP_01165121.1| paraquat-inducible protein B [Oceanospirillum sp. MED92]
gi|89083901|gb|EAR63118.1| paraquat-inducible protein B [Oceanospirillum sp. MED92]
Length = 550
Score = 72.3 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 30/394 (7%), Positives = 98/394 (24%), Gaps = 28/394 (7%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
+ LS +V + G PVGRI + D + D + ++ +
Sbjct: 168 SDNAHSLSVGETVLYRGFPVGRIEQVEFDPKAREARYGLFIKAPYDQLVTTNSRFWNMSG 227
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
++ ++ T+ + + + + +++
Sbjct: 228 VQLNLSADGVNVQTGSLDTLLSGGVTFDVLSGENPGKKSQDGDSFRLYSDFSSVTEQPYA 287
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ + + + ++T S +
Sbjct: 288 YYNEYLLLFDQSVRGLVAGAPVEFRGVRIGTVEKISFQIGELTGESDPRIPVIIRLEPGR 347
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D + Q + + + D L
Sbjct: 348 LGFDDAENVLTGAHEKLRYWVQQGMRASLKSGNLLTGSLFVDF---------------DL 392
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
D + + + ++ ++ I +++ S+
Sbjct: 393 YPDADKANVIEFEGYPVIPTISGGLLQLENKLIAVLNKIEQLQVEPVIAQLDSTLSSSEQ 452
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ Q+ + +I ++ K+ +L ++ + + + ++ +
Sbjct: 453 AIQQLEATLEQIEKLTRSKDTRALPEELKSTLKELQTMAQGFSP------------DSRL 500
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ + LQ+T+ L + P +++
Sbjct: 501 YQEMNRSLDTLQQTLKQLQPILKTLDEKPNALIF 534
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/282 (10%), Positives = 82/282 (29%), Gaps = 24/282 (8%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-----FLDQEYPNHSLAKALIRPDT 91
E ++ SV GL + V F G+ +G + + L E + P
Sbjct: 288 YYNEYLLLFDQSVRGLVAGAPVEFRGVRIGTVEKISFQIGELTGESDPRIPVIIRLEPG- 346
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
L + T + Y + + ++
Sbjct: 347 RLGFDDAENVLTGAHEKLRYWVQ---QGMRASLKSGNLLTGSLF---------------V 388
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ +D + I+ + ++ + +E + N I + Q+ S
Sbjct: 389 DFDLYPDADKANVIEFEGYPVIPTISGGLLQLENKLIAVLNKIEQLQVEPVIAQLDSTLS 448
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
S+ + + ++K+ ++ D + + + L++ + ++ +
Sbjct: 449 SSEQAIQQLEATLEQIEKLTRSKDTRALPEELKSTLKELQTMAQGFSPDSRLYQEMNRSL 508
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRS 313
T Q+ +++ +L K + A + +
Sbjct: 509 DTLQQTLKQLQPILKTLDEKPNALIFDAPKSSDPIPGGDTNE 550
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + +Y + V I DG+ + ++ + VG++ + L
Sbjct: 28 LIALCIGGWMVY-----QDWANRGQLVTISFIT-ADGIEEGKTPIKVKSVQVGKVESVRL 81
Query: 74 DQEYPNH-SLAKALIRPDTPLYPSTTATI 101
+ + N + + L +T +
Sbjct: 82 NFDDNNVLVKVRIEPEAEQLLRENTKFWV 110
>gi|146313263|ref|YP_001178337.1| hypothetical protein Ent638_3629 [Enterobacter sp. 638]
gi|145320139|gb|ABP62286.1| Mammalian cell entry related domain protein [Enterobacter sp. 638]
Length = 187
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 2/147 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VG+F+V L + F + + ++ GL S VR
Sbjct: 1 MQTRKSEIWVGVFLVLALLAALFICLRAADITSIRTEPTYRLYATFDNIGGLKARSPVRI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+ + LD++ + I + +++ +IRT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVADITLDEKTY-LPRVEMEIEERYNHIPDTSSLSIRTSGLLGEQYLALNVGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINY 146
+ + I + + +
Sbjct: 120 DPELGTSILKDGGVIQDTKSAMVLEDM 146
>gi|307080020|ref|ZP_07489190.1| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu011]
gi|308362188|gb|EFP51039.1| MCE-family protein mce3C [Mycobacterium tuberculosis SUMu011]
Length = 370
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 35 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 91 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 142 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 202 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 261
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 262 ALDKLNGVLAIVENRKERVRQA 283
>gi|302187349|ref|ZP_07264022.1| PqiB family protein [Pseudomonas syringae pv. syringae 642]
Length = 554
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/411 (10%), Positives = 101/411 (24%), Gaps = 35/411 (8%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
Y + G + L S V + I VG+I L + + D
Sbjct: 162 YGTKGTRFTLH-AGDLGSLEVGSPVYYRRIQVGQIAAFHLSADGKGVDAEVFINAPNDRF 220
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ T + + L + TI + T P
Sbjct: 221 VTTDTRFWNASGVGMTLDADGLRIKTESVSTILAGGVAFVEPDYSTNAPRAAERARFTLF 280
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ +K I I + + + + + + +
Sbjct: 281 DDQQKALSPPDGEPGYIHMIFSQSLRGLEVNSPVEFMGITLGRVVSVDLDYDAASKSFTS 340
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
L + +K++K + + + + I +++ + + +
Sbjct: 341 IVGALIYPDRLGMANEKIVKTLGVTDDARTAQLIADFVKRGLRAQPRSESLLTG------ 394
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
L + + + + ++E Q +S +
Sbjct: 395 ----------QLYISLGFIANAAPVPFDVSAQPLIIPTVPGELEKMQEQVQQIIDKVSNV 444
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
++ I NLN S + + N + + + R T E +
Sbjct: 445 P-VQEIADNLNGSLGEAQKTFGLFNE--------QVMPELHGVLLQSRSTMEVAGAALAE 495
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
I + +Q + RNP+ ++ GR +
Sbjct: 496 --------DSPVRQQIDRTIDDVQRMARSVRVLTDYLSRNPEALIRGRTRQ 538
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 24/46 (52%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ DG + + S+ GL +S V F GI +GR+V + LD +
Sbjct: 287 LSPPDGEPGYIHMIFSQSLRGLEVNSPVEFMGITLGRVVSVDLDYD 332
>gi|219557922|ref|ZP_03536998.1| virulence factor mce family protein [Mycobacterium tuberculosis
T17]
Length = 402
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 84/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL ++V +G PVG++ + LD L + + D L
Sbjct: 39 FFNQGTRVSAYF-ADAGGLRIGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 94
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 95 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 145
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 146 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 205
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 206 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 265
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 266 ALDKLNGVLAIVENRKERVRQA 287
>gi|168052870|ref|XP_001778862.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669731|gb|EDQ56312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 72/277 (25%), Gaps = 6/277 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF++S + ++ W+ + G++ + VR G+ VG +V
Sbjct: 37 VGLFIMSGVLLLAITLVWVKGKQIRAQTRKYEAVFEFQLAQGITVGTPVRIRGVDVGNVV 96
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ E + + + + + GL T I+++ R I +
Sbjct: 97 QVRPSLE-KIDVVVELS-DAGIVVPRNALVEVNQSGLISETLIDVTPRRP----IPKPTV 150
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + E + + + + E +
Sbjct: 151 GPLDPKCPSEGLIVCDRERIKGEQGVSLDELVGICTKIARQIDGLGVERMASMAERLGDA 210
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ + K+ + + D +A + +
Sbjct: 211 VQEARPLLLKVQSMAEDVEPLLKEVREGGLLKDFEKLTKVAAEAGRDLSNLNKVVLTSDN 270
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ S + T+ V ++ V +
Sbjct: 271 TELLRDSVSTLTKTLKHVESISKDVSGVTGDAKTRNN 307
>gi|83311843|ref|YP_422107.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Magnetospirillum
magneticum AMB-1]
gi|82946684|dbj|BAE51548.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Magnetospirillum
magneticum AMB-1]
Length = 185
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/115 (25%), Positives = 48/115 (41%), Gaps = 3/115 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T G V+ + + + + G + R DG++ S+VR +G VG+
Sbjct: 31 TVTGGAVMLVGALLLMLAFAVGGKSADSGDGYALKARFNR-ADGINVGSAVRLSGTVVGK 89
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+V LD+ ++ +R D L T A I T GL G +IEL ++
Sbjct: 90 VVEQSLDE--RYRAVLTLQLRKDIQLTLDTAAVIYTDGLLGAKFIELKPGGDDQM 142
>gi|218753680|ref|ZP_03532476.1| virulence factor mce family protein [Mycobacterium tuberculosis GM
1503]
Length = 414
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 39 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 94
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 95 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 145
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 146 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 205
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 206 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 265
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 266 ALDKLNGVLAIVENRKERVRQA 287
>gi|297190647|ref|ZP_06908045.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197719874|gb|EDY63782.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 350
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 91/286 (31%), Gaps = 9/286 (3%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
+ + + + G GL VR G+ VG + + L
Sbjct: 38 YKADALPFVGGGTTYRADFTE-AAGLDEGDEVRIAGVKVGEVTAVALAG---ARVRVDFK 93
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
+ D + S+T I + L G Y+ + L + + + T +
Sbjct: 94 V-RDAWIGDSSTVAIAIKTLLGDKYLAVDPLGTRGQDPAEPIPSSRTTSPFDVTQAFNGL 152
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + ++K+++S R I ++ + + +S ++ + + +++ ++
Sbjct: 153 GETIGKIDTEKLAESFRTITDTFKDSPPNVRNAATGLSALSRSVSERDAQLAELLKGSKQ 212
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF----VKSSDQVIN 262
+ D K + + + ++ +L + + Q+
Sbjct: 213 LTRTLDGKKSSFELLLEDGNDLLGEIRARRDAIHALLTGTKSLGIQLGGVVQDNKRQLKP 272
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
T+ + + T + +++D L+ + + D+
Sbjct: 273 TLDALGKVTAVLLKNRKQLDRTLALAGPYYRLVGNTLGNGRWFDTY 318
>gi|17227677|ref|NP_484225.1| hypothetical protein alr0181 [Nostoc sp. PCC 7120]
gi|17135159|dbj|BAB77705.1| alr0181 [Nostoc sp. PCC 7120]
Length = 476
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/416 (9%), Positives = 130/416 (31%), Gaps = 25/416 (6%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ WL+R G + ++ + G+ ++VR+ G+ VGRI + PN
Sbjct: 33 VILLWLNRYTA-AGSSYKAVVEF-ANAGGMQRGATVRYRGVKVGRISQIQP---GPNAVE 87
Query: 83 AKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLR--KEKKTIFQIATERNQRAMITA 139
+ + + + GL + I+++ +T+ + + ++I
Sbjct: 88 VEIEFAQSNLIIPRDVVIEANQTGLISESIIDITPKSSLPTGQTLPKPLDKNCDNSLIIC 147
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
S + I + + + S + E ++ + + ++V A
Sbjct: 148 NNSRLKGQIGISVDALIRSSTDFANTYTNPEFYQRVNRLLETSAQAATSVAALTQDFRGL 207
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
+ + NT T+ +T ++ +S +
Sbjct: 208 TKSFQGQLGTFASTANTVQRATNELTVSTTKTVNQFGITADKFGTTATQASRLLSDLNSL 267
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + E ++ +++ S + ++N+ ++N + + +R
Sbjct: 268 LNTNRSSLVSALNNITETSNQLRLTVTNLSPSLNRLTQGELIKNLEALSANAAQASANLR 327
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTF 379
T+ + + ++ + + + ++ S ++ ++ + +
Sbjct: 328 NATESLNDPKNAVL-LQQTLDSARLTFENTQKITSDLDELTGDPNFRQNLRQLVNGLSGL 386
Query: 380 RDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
++++I + + + ++ + + + + +P
Sbjct: 387 VSSTDQIEQQAK----------------LATTLESMKAAADKPNITIPSLATHPSS 426
>gi|83593774|ref|YP_427526.1| hypothetical protein Rru_A2439 [Rhodospirillum rubrum ATCC 11170]
gi|83576688|gb|ABC23239.1| Mammalian cell entry related [Rhodospirillum rubrum ATCC 11170]
Length = 271
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
ES T +G VV + + +V + DG+ S VR
Sbjct: 3 ESPRRETLIGGAVVLLGVALLAATSINRHDASGQAGAYQVEAVFNRT-DGIGIGSPVRLA 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
GIP+GRIVG LD EY ++ + L T A I+T GL G Y
Sbjct: 62 GIPIGRIVGHKLDPEY--RAIVTMRLDLPNELPDDTAAKIQTDGLLGSKY 109
>gi|297743846|emb|CBI36729.3| unnamed protein product [Vitis vinifera]
Length = 382
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 4/125 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S+ WL + + G+ + VR G+ VG +
Sbjct: 100 VGLFLVSGTVLLVLSLAWLRGFQLRSKFRKYLAVFEFTQACGICKGTPVRIRGVTVGNV- 158
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ ++ A + D + ++ + GL T I+++
Sbjct: 159 -IQVNP-SLKSIEAVVEVEDDKIIIPQNSLIEVNQSGLLMETLIDITPRDPLPTPSVGPL 216
Query: 129 TERNQ 133
Sbjct: 217 DPDCT 221
>gi|147779029|emb|CAN71395.1| hypothetical protein VITISV_036125 [Vitis vinifera]
Length = 408
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 21/125 (16%), Positives = 40/125 (32%), Gaps = 4/125 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S+ WL + + G+ + VR G+ VG +
Sbjct: 100 VGLFLVSGTVLLVLSLAWLRGFQLRSKFRKYLAVFEFTQACGICKGTPVRIRGVTVGNV- 158
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ ++ A + D + ++ + GL T I+++
Sbjct: 159 -IQVNP-SLKSIEAVVEVEDDKIIIPQNSLIEVNQSGLLMETLIDITPRDPLPTPSVGPL 216
Query: 129 TERNQ 133
Sbjct: 217 DPDCT 221
>gi|111021675|ref|YP_704647.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110821205|gb|ABG96489.1| MCE family protein [Rhodococcus jostii RHA1]
Length = 471
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/359 (9%), Positives = 98/359 (27%), Gaps = 7/359 (1%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + +F + + ++ + EV +R+P S GL ++V
Sbjct: 1 MRMTRFVRIQLIIFSILTVIGLVVMSIQYVKVPVLFGVGRYEVSVRLP-STGGLYPHANV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G +G + + L + AK + D + A +++ G Y++L R
Sbjct: 60 AYRGTNIGVVENVTLTGDG---VEAKMSLDSDYKIPADVDAAVKSVSAVGEQYVDLIP-R 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + S S +Q +I+
Sbjct: 116 DGAAEANGPYLADGDVIPLDRATIPQDVGEMLDQADELLASISDTRLQTVIDEAFTAFNG 175
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ +++ + + D T+ ++ +
Sbjct: 176 SGPDLQRLIDSARLFVEEADANSDATKALIDQVGPLLDTQVVSSDAIRSWTQDLVTFTDQ 235
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ +++ ++ + D++ T + + ++ ++
Sbjct: 236 LRASDPSLRSVLEKGPGTAQEATQLFQDLQPTLPILLRNLVSVGQVGVIYNKSIEQVLVI 295
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
A T+ + + Q T + S + + + +
Sbjct: 296 YPPLTAALVTAATGGPVEDGAIVDFALQLHDPPACTTGFLPPEQRRSGDQTDPIATPND 354
>gi|88607489|ref|YP_504679.1| mce-related protein [Anaplasma phagocytophilum HZ]
gi|88598552|gb|ABD44022.1| mce-related protein [Anaplasma phagocytophilum HZ]
Length = 150
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/104 (21%), Positives = 40/104 (38%), Gaps = 3/104 (2%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY 77
+ F + LS ++ V V+GL S VR +G+ +G + + LD +
Sbjct: 20 IALGSFMLNRLSHQVRFYNRCNLVTASFSD-VNGLRVGSDVRVSGVNIGSVTAMSLDSDN 78
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ I L ++A+I L G YI++ +
Sbjct: 79 LP--VVTLCIHKGLLLPVDSSASITYADLLGKRYIDIIPGADDN 120
>gi|296169582|ref|ZP_06851202.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895848|gb|EFG75543.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 465
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/297 (11%), Positives = 83/297 (27%), Gaps = 10/297 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ V L V+ + + + + + VR
Sbjct: 1 MISR-NRLKVWLAVLLAALTVIGAGVAIRNT---FFRPKTITAYFTT-ATAIYPGDDVRV 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+GI VG I + + + + P+ A I Q L Y++L+ +
Sbjct: 56 SGIKVGSISAIHPEG---TRARITMHVDHGVPIPADAKAVIVAQNLVAARYVQLTPAYRS 112
Query: 121 KKTIFQIA--TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + A+ + + A + SS + + I++ L
Sbjct: 113 SGATMRDGAIIPVERTAVPVEWDEVKDQLMRLATDLGPNSQVSSSSVGRFIDSAANALGG 172
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ L+ + + + T ++ A
Sbjct: 173 NGDKLRQTLAQLSGVGRILADHSGNIVDIIKNLQTFVTALRDSNQQLVQFNNRLATLSSV 232
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ ++ + N + +V + + R+ T + +L D +K+
Sbjct: 233 LDDSRSDLDAALTNLSSALPEVQRFIGETRDQTSEQVARLADLTQILVDNKMALKNV 289
>gi|239931482|ref|ZP_04688435.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291439858|ref|ZP_06579248.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291342753|gb|EFE69709.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 361
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 76/249 (30%), Gaps = 5/249 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G GL VR G+ VG + G+ LD + D L
Sbjct: 55 FGGGTHYSADFSE-AAGLDEGDEVRIAGVKVGEVTGVALDG---ARVKVTFEVE-DAWLG 109
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
TTA I + L G Y+ L L ++ + T + + + E
Sbjct: 110 DRTTAAIAIKTLLGDKYLALDPLGSGRQDPGSRIPLSRTTSPYDVTQAFQDLGSTVEEID 169
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
++++++S + + EN + + +S ++ + + +++ + + ++
Sbjct: 170 TRRLAESFETLSETFENSPPHVRKAADGLSALSRSVSERDAELSELLEGSARFTKTLQNR 229
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + +L+ + + + +
Sbjct: 230 KSSFETLIEDGGSLLGELQDRRDAIRALLKGSRKLGIELAGLVEDNEKQLGPTLKALGRV 289
Query: 275 QEVGQKIDH 283
+V +K +
Sbjct: 290 TDVLEKNNT 298
>gi|119714953|ref|YP_921918.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119535614|gb|ABL80231.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 379
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/205 (12%), Positives = 64/205 (31%), Gaps = 14/205 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S V +V +L + +++ + P ++ + S VR
Sbjct: 1 MSSILKRAVVPAVLVILLVAAALTMFR-------GEDHKTLTAHFPRAIS-IYEGSDVRV 52
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+PVG++ + + D L A I + G +++L+ +
Sbjct: 53 LGVPVGKVDTVTPSGTD---VVVTMTYDADLKLPADAKAVIIAPSIVGDRFVQLTPVYTG 109
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ AT R A P ++ S+ ++ + + + + ++ +
Sbjct: 110 GDVLADGATLAGDRT---AVPLELDQIYSSLDDLTVALGPTGANRNGAFSDLLETTAENF 166
Query: 181 ANIETISTVLANNISHIDKMMHTTQ 205
+ + + + +
Sbjct: 167 GGQGAKFHQTIQDFGKLSQTLDDNK 191
>gi|167970510|ref|ZP_02552787.1| virulence factor mce family protein [Mycobacterium tuberculosis
H37Ra]
gi|215404238|ref|ZP_03416419.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|215411650|ref|ZP_03420446.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|253798984|ref|YP_003031985.1| MCE-family protein mce3C [Mycobacterium tuberculosis KZN 1435]
gi|254232138|ref|ZP_04925465.1| MCE-family protein mce3C [Mycobacterium tuberculosis C]
gi|260186939|ref|ZP_05764413.1| virulence factor mce family protein [Mycobacterium tuberculosis
CPHL_A]
gi|260201061|ref|ZP_05768552.1| virulence factor mce family protein [Mycobacterium tuberculosis
T46]
gi|289746093|ref|ZP_06505471.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|294996890|ref|ZP_06802581.1| virulence factor mce family protein [Mycobacterium tuberculosis
210]
gi|297634537|ref|ZP_06952317.1| virulence factor mce family protein [Mycobacterium tuberculosis KZN
4207]
gi|297731525|ref|ZP_06960643.1| virulence factor mce family protein [Mycobacterium tuberculosis KZN
R506]
gi|124601197|gb|EAY60207.1| MCE-family protein mce3C [Mycobacterium tuberculosis C]
gi|253320487|gb|ACT25090.1| MCE-family protein mce3C [Mycobacterium tuberculosis KZN 1435]
gi|289686621|gb|EFD54109.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|328458739|gb|AEB04162.1| MCE-family protein mce3C [Mycobacterium tuberculosis KZN 4207]
Length = 414
Score = 72.3 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 39 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 94
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 95 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 145
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 146 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 205
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 206 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 265
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 266 ALDKLNGVLAIVENRKERVRQA 287
>gi|315445481|ref|YP_004078360.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315263784|gb|ADU00526.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 360
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/340 (10%), Positives = 101/340 (29%), Gaps = 10/340 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYD-GPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
G + + + + L + GL+ + V+ +G+
Sbjct: 7 ASLVRAGF--LGAVLIALVIVVGLQPQQLWAMATSVRYQAVFAE-AGGLAPGNEVKVSGV 63
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + + L+ +L + + +TTAT+ + G + L
Sbjct: 64 TVGSVSDVALE---RGTALVTFSVDSAVRVGDATTATVGISTVLGERVLVLKPEGTRSLG 120
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + + T + + + + I+ S + IE I L T +
Sbjct: 121 SMGVIPLTRTGSPYSLTDAVGEFTTNTEGTDTAAINQSLDTLSDTIERIAPQLGPTFDGV 180
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+S L + + ++ + + + + + + A+ + I+
Sbjct: 181 SRLSKSLNSRNESLVALLDAA---ADVTGVLSERSAQVNTLLLNANDLLAVLQDRRYAIV 237
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ + S V + ++ T + V + ++ + S+ +K +
Sbjct: 238 NLLSSTTAVAQELSGMVADNEQELAPTLEKLNTVSEMLERNRDNISASLKGLAKYQVTQG 297
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
A + + ++ Q + +
Sbjct: 298 EAVNNGFFYNGFASNLLPGPAIQPFLDYALGFRRGVNAGQ 337
>gi|126732551|ref|ZP_01748349.1| hypothetical protein SSE37_10647 [Sagittula stellata E-37]
gi|126706997|gb|EBA06065.1| hypothetical protein SSE37_10647 [Sagittula stellata E-37]
Length = 149
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
F +Y + + G + S++G++ + VR G+ VG + + L+ +
Sbjct: 21 FGVYTIQSTGFSLGGTGYDLTASFRSIEGVTVGTDVRLAGVKVGSVTDIVLNPQTYRADT 80
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ + + I ++GL G Y+E+S
Sbjct: 81 V-VTVEEGIQIPDDSAIIIASEGLLGGNYVEISPGGSPFF 119
>gi|145222692|ref|YP_001133370.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215178|gb|ABP44582.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 448
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/311 (11%), Positives = 82/311 (26%), Gaps = 9/311 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ + +G+ VR G+PVGRI + + E + A I
Sbjct: 35 VVAYFENSNGIYEGDDVRILGVPVGRITSIEPEPE---RVKISFWYDDRYDVPADAAAAI 91
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ L I+L+ + + A QR ++ + + T +
Sbjct: 92 LSPALVTARAIQLTPVYTGGPVLGDNAVIPLQRTVVPVEWDQVRAQLERLSETLQPTEPG 151
Query: 162 SRHI-----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
EN+ + +S + + T + +
Sbjct: 152 GVSPLGSVINTTAENLRGQGADIRETVIKLSQAFSALGDRSTDIFSTIKNLAILVSALQD 211
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + + + +++ I+ + V + T+
Sbjct: 212 STDLMRQLNQNLASVSGLLTDGPDEVANAIRDLNAAVGDVQSFVAENRESLGTTSDKLAG 271
Query: 277 VGQKIDHLLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
V + L D + T NI SS+ I + Q + +
Sbjct: 272 VTTALTESLEDIKQFLHVAPSTFQNYINIWQPAQGAVSSVPQINNFANPIQFLCGAVQAA 331
Query: 336 ENITSNLNDSS 346
+ + +
Sbjct: 332 SRLGAEESAKL 342
>gi|21673164|ref|NP_661229.1| VpsC protein [Chlorobium tepidum TLS]
gi|21646243|gb|AAM71571.1| vpsC protein [Chlorobium tepidum TLS]
Length = 292
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/119 (16%), Positives = 52/119 (43%), Gaps = 4/119 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E K G+F + L F+ + + ++ + + + + V+GL+ ++ V
Sbjct: 6 ELKWSDLKTGIFFLLGLGFAAYLGLVIGKNTSIFTGVTTIKV-MTRDVNGLAENNFVSVA 64
Query: 62 GIPVGRIVGLFLDQEYPN-HSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTL 117
G +G + L + + +A+ ++ + + + A+IR+ G+ G Y+++
Sbjct: 65 GKKIGTVSKLDFSTQNDSLFVVAELKLQNEYANLVTKDSKASIRSLGVLGDKYVDIKAG 123
>gi|271964517|ref|YP_003338713.1| resistance to organic solvents ABC transporter periplasmic
component-like protein [Streptosporangium roseum DSM
43021]
gi|270507692|gb|ACZ85970.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component-like protein
[Streptosporangium roseum DSM 43021]
Length = 460
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 6/111 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ ++G FVV + + ++ + + + + P + S GL V +
Sbjct: 1 MRNR-IRINLGFFVVLGVVMTVWAFTSIIKLDIVERP-YRISAEFLSS-PGLVRGFDVAY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G+ +GRI + L + I D L TA +R + G Y
Sbjct: 58 LGVRIGRIDDVALAP---GKIVVGLSINRDVRLPLGVTAEVRRKSAIGEPY 105
>gi|328953276|ref|YP_004370610.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
gi|328453600|gb|AEB09429.1| Mammalian cell entry related domain protein [Desulfobacca
acetoxidans DSM 11109]
Length = 317
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/303 (9%), Positives = 82/303 (27%), Gaps = 9/303 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
GLF+ L + + + ++ P S + L S+V+ +G++
Sbjct: 11 LAGLFLFLTLIVGVSLVLLIGLGKGWFQRQQTYQVKFPQSYN-LQPGSAVKMFNTEIGKV 69
Query: 69 VGLFLDQ-EYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
L + + N + + + + + A + + + G ++ +S I
Sbjct: 70 TRLRISRLRDENQVVITIRVDAEYSDLIRLDSIAEVESPTILGSEFLSISPGTYGYPPIE 129
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
T ++ A + + +S+ + +++ + +K LTT
Sbjct: 130 AYGTIPSRVQKTLADYLEEFQPEESLRKAKQFVSNMAFLSEQLKSHEQKLLTTLNNFDAV 189
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ ++L + +M + + +
Sbjct: 190 LVSILEAKGTLGQLLMQKDFYGRLELALSRVEAILKNSEELTKN-----LKAASENVPGL 244
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + + + R+ + + + + L
Sbjct: 245 VHNVGQQLDQVKNLLTELQDAARKLPGLLETTDEAARTGKEVLDAVKANPIVKMTLPETP 304
Query: 306 DST 308
S
Sbjct: 305 PSQ 307
>gi|302525034|ref|ZP_07277376.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302433929|gb|EFL05745.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 401
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/302 (14%), Positives = 97/302 (32%), Gaps = 10/302 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ V FVV L + F + + G + + G+ T+ V +
Sbjct: 1 MLTRRIRIQVIAFVVVALAATSFVGAKYAGIARLFGAGSYTVHLELSEGGGIFTNGEVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGRI L L + A L+ P + + A + + G Y++L
Sbjct: 61 RGVAVGRIGQLRLTEHGM---EADLLLDTSAPQIPANARAIVANRSAVGEQYVDLQPSGD 117
Query: 120 EKKTIFQIATERNQ----RAMITATPSGINYFISNA--ENTSKKISDSSRHIQKIIENIE 173
+ + + + S ++ ++ E+ +++ +Q +++
Sbjct: 118 QGPYLEDGSVLPRSSTALPLPVQTFLSDVDALTASVPTEDLRTVVNELDNALQGSGPDLQ 177
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ T + ++ S L +D + SS + F+ L S
Sbjct: 178 LLMDTARSFTDSASAHLPQTTKLLDDGSTVLKTQAASSTAWRDFSRDARLFASQLASSDG 237
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
Q + + +S + + ++ T F ++ LL +
Sbjct: 238 DLRQLIATAPPAASQVTGLLRDNSPGLPILMANLLTTADVFSARTDGLEQLLVTLPKTVA 297
Query: 294 SK 295
+
Sbjct: 298 AT 299
>gi|145225115|ref|YP_001135793.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145217601|gb|ABP47005.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 343
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 5/105 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T F ++++ + G S L++ SVR GI VG
Sbjct: 8 ATKFAAFGLTMVVLTAGLFMIFGEYR--SGAANRYSAVFTDSSS-LTSGDSVRAAGIRVG 64
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ L + + + L T +R L G Y
Sbjct: 65 TVRGVTLQDDNT--VVVDFDADDNVRLTEGTRIAVRYLNLVGDRY 107
>gi|240170395|ref|ZP_04749054.1| MCE-family protein [Mycobacterium kansasii ATCC 12478]
Length = 373
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 89/304 (29%), Gaps = 8/304 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G F+ ++L ++ GL+ + V +G+
Sbjct: 7 AGLVRAG-FIGTVLVIMVIAVGLSPEQLIQWATAVRYQAVFSE-AGGLAQGNDVTISGMK 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + + L + +L I+ L TTA IRT L G + L + K
Sbjct: 65 VGSVSDVAL---HNGDALVTFNIKGSVLLGSDTTAHIRTGSLLGQRVLTLESAGSGKLHP 121
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + + + + A + ++ S + ++ I L +
Sbjct: 122 MDVIPISRTSSPYSLSEALSDLTTDVAGTNTDTLNQSLDTLSTTLDQIAPQLGPAFDGVT 181
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+S L + + ++ ++ L + + Q++ Q+L
Sbjct: 182 RLSQTLNSRNKSLRDLLQGAADVTKILSQRSAQVNTLILDANTLLSVLVARRQEIVQLLA 241
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
N + V + + T V ++ + S + +
Sbjct: 242 NTSAVAKQLS---GLVHDNESKLAPTLTRLNSVIAMLEKNRDNLSQALPGLAKYQLTQGE 298
Query: 305 ADST 308
A S
Sbjct: 299 AISN 302
>gi|120401390|ref|YP_951219.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954208|gb|ABM11213.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 437
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/335 (12%), Positives = 97/335 (28%), Gaps = 16/335 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ P + GL T + V +G PVG++ + LD L I + L
Sbjct: 35 FLNPGKQYSAYF-ADAGGLFTGAGVEVSGYPVGKVSDISLDGP---RVLVTFKILGNINL 90
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T ATIRT+ L G + + + A + + I T S + +
Sbjct: 91 GEQTEATIRTKSLLGTKVLNVMP---------RGAGKLDGPIPIERTSSPYQLPDALGDL 141
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + T +++T +A I++ + ++
Sbjct: 142 ARTVSGIDTNQLSDSLSMLAQTFADTPPHLKTAVEGVARFAETINQHDDQMRSLLDNAAK 201
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
L ++ E + N S+Q+ + + R+
Sbjct: 202 VTAVLAERTEQVVTLVHDTNALLAQLRTQSEALDAIWFNISAVSEQLRGFIAENRQ---E 258
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ +K++ +L+ ++ + + L N + S + +
Sbjct: 259 LKPALEKLNGVLTIVDNRKDRLQKAVKLLNSYAMSLGESVSSGPFFKAYVANLLPGQFVQ 318
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + + +L
Sbjct: 319 PFIDAAFSDLGLDPNVLAPSELTDPQLGQPGTPAL 353
>gi|315443156|ref|YP_004076035.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261459|gb|ADT98200.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 448
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/311 (11%), Positives = 83/311 (26%), Gaps = 9/311 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ + +G+ VR G+PVGRI + + E + A I
Sbjct: 35 VVAYFENSNGIYEGDDVRILGVPVGRITSIEPEPE---RVKISFWYDDRYDVPADAAAAI 91
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ L I+L+ + + A QR ++ + + T +
Sbjct: 92 LSPALVTARAIQLTPVYTGGPVLGDNAVIPLQRTVVPVEWDQVRAQLERLSETLQPTEPG 151
Query: 162 SRHI-----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
EN+ + +S + + T + +
Sbjct: 152 GVSPLGSVINTTAENLRGQGADIRETVIKLSQAFSALGDRSTDIFSTIKNLAILVSALQD 211
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + + + +++ I+ + V V + T+
Sbjct: 212 STDLMRQLNQNFASVTGLLTDGPDEVAAAIRDLNAAVVDVQSFVAENRESLGTTSDKLAG 271
Query: 277 VGQKIDHLLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
V ++ L D T NI SS+ I + Q + +
Sbjct: 272 VTTALNESLEDIKQFLHVGPSTFQNYINIWQPAQGAVSSVPQINNFANPIQFLCGAVQAA 331
Query: 336 ENITSNLNDSS 346
+ + +
Sbjct: 332 SRLGAEESAKL 342
>gi|117164586|emb|CAJ88132.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
Length = 435
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 45/137 (32%), Gaps = 7/137 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F+V + F + +Y G V + +P + GL T S V
Sbjct: 1 MITLAVRLKNLAFLVIAVLVLGFVGIRYADLGRYVGAADYYTVDVELPRT-GGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + +A I+ P + A + G YI+L
Sbjct: 60 TYRGVSVGRVGPIDLTADG---VVAHLRIKKSAPSIPADARAVVAGLSAVGEQYIDLRPE 116
Query: 118 RKEKKTIFQIATERNQR 134
+
Sbjct: 117 SDTGPYLEDGTRIEQPD 133
>gi|255534297|ref|YP_003094668.1| Mce4 protein [Flavobacteriaceae bacterium 3519-10]
gi|255340493|gb|ACU06606.1| Mce4 protein [Flavobacteriaceae bacterium 3519-10]
Length = 318
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/303 (10%), Positives = 90/303 (29%), Gaps = 7/303 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ GL + + ++ + + +V+GL+ + V NG+
Sbjct: 4 SKEIKAGLIALLAIIGFVILFQFMKGKSLFTTDNIFY--AQFDNVEGLAASNPVSINGLK 61
Query: 65 VGRIVGLFLDQEYPNHS--LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG++ + + + K I + +T I GL + ++
Sbjct: 62 VGQVDEIIPITQNDGKIHFVVKVTIDDNFEFSKRSTLEIFEPGLMSGKEMRVNLAYGSPM 121
Query: 123 TIFQIATERN-QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ +M+ S + + +++ + + +I+ K +
Sbjct: 122 AKDGDTLKGAFTLSMMNNISSQVGPVKDQLQIVLRRVDSLTNNANQILNEENKMEIRALL 181
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + + + N T++DK + D V +
Sbjct: 182 RNLNTTVSSFESTARQTNALVANNDPRVQRMLDNANLATISARTAIDKYGRVADEVDVQK 241
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRET--TQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ I S K + + + +E+ + ++ ++ ++ + +T+
Sbjct: 242 LNNTIDKLSQTADKLNGVISGIQNGEGSLGKLTQDEELYRNLNESSANLNNLILDLKTNP 301
Query: 300 FLE 302
Sbjct: 302 KRY 304
>gi|108760892|ref|YP_632092.1| Mce family protein [Myxococcus xanthus DK 1622]
gi|108464772|gb|ABF89957.1| Mce family protein [Myxococcus xanthus DK 1622]
Length = 336
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 63/192 (32%), Gaps = 11/192 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + VG V++ + ++ + V G+V + V+
Sbjct: 1 MDERRLELKVGALVLAAIVGVLLLLWLMGELKLGSETGLAVDFGHTGNV---VKGAPVKL 57
Query: 61 NGIPVGRIVGLFLDQEYPNH------SLAKALIRPDT--PLYPSTTATIRTQGLAGITYI 112
G+ VGR+ + L E + + + P+ L T+ T G+ G Y+
Sbjct: 58 GGVQVGRVQDIQLQPERRDAQGRPLPVRMELAVAPEAVGALRKDARVTVATVGILGEPYL 117
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
EL+ ++ A + + F+ ++ ++ R + + +
Sbjct: 118 ELNPGSAPERLPAGTAVRGTDAPRLDVLAEQLTRFVDLLSQMLEEDPEAIRGLAANVSRL 177
Query: 173 EKPLTTTIANIE 184
+ L +
Sbjct: 178 ARTLDQLLTENR 189
>gi|324997543|ref|ZP_08118655.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 428
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 39/130 (30%), Gaps = 7/130 (5%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQY---DGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T VGL VV L V S L VR +
Sbjct: 15 TLVGLGVVLFLVGIVVFAITAQNGLPGYLPGVERTSVKASFDDS-GALRNGDDVRIADVR 73
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + + L+ ++A + +Y TA I + G Y++L ++ +
Sbjct: 74 VGYVSDIALE---DGRAVATMQLDNGREVYNDATAGIGARSALGQKYVDLKPGTEQAGEM 130
Query: 125 FQIATERNQR 134
AT
Sbjct: 131 ASGATIATTT 140
>gi|300783699|ref|YP_003763990.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793213|gb|ADJ43588.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 330
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 92/279 (32%), Gaps = 8/279 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQ-YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+G V+ + + L+ N G GL +D VR GI
Sbjct: 8 NPIVLG--VIGSVALAALLTVTLNYDNLPIVGGGTTYEAEFSE-AAGLQSDDEVRIAGIK 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + G+ L + H L ++ + + T+A I+ + L G ++ L+ +
Sbjct: 65 VGEVRGVQLADD---HVLVSFRVK-NAWIGDRTSAEIKIKTLLGRKFLALNPTGDGVQDP 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ T + + +K+++DS + N + + + + +
Sbjct: 121 GRPIPRTRTVTPYDVTDAFNGLADTVGAIDTKQLADSFTTLSDTFRNSPEHVRSALDGLS 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+S +++ S I +++ + + + N +L + +L+
Sbjct: 181 RLSKTVSSRDSQIAELLANARKLTTTLANSNDDFEKLIGDGNLLLTELNSRRDAIRDLLD 240
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + + ++ ++ ++ +
Sbjct: 241 GSARLAGQLSGLVRDDSDALKPALQSLNQVTDLLKRQND 279
>gi|161522828|ref|YP_001585757.1| hypothetical protein Bmul_5802 [Burkholderia multivorans ATCC
17616]
gi|160346381|gb|ABX19465.1| Mammalian cell entry related domain protein [Burkholderia
multivorans ATCC 17616]
Length = 531
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/453 (9%), Positives = 114/453 (25%), Gaps = 60/453 (13%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY------------------DGPMAEVIIRIPGSVD 50
+G +S L Y + + D + S+
Sbjct: 113 RIGATGISGLGTLLSGAYIGADLGRSPQKETAFTGLETPPAVTADQQGRRYRLH-GDSLG 171
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ S V + + VG++VG LD++ + + P
Sbjct: 172 SIDIGSPVFYRHLQVGQVVGFSLDEKGTG---VDVQVFVNAP------------------ 210
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKI 168
Y + + + + T S + ++ +
Sbjct: 211 YDKYVDNNTRWWHASGVDLRLDSNGLKLNTQSLATVVVGGLAFQSPPGQPDAPQAADNAS 270
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
T V+ + + V N +
Sbjct: 271 FRLAPDEADAMRDPDGTPLMVVMRFDQSLRGLSVGAPVDLRGIALGQVTNIGIEYNERTR 330
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ + L ++ ++ H V + + G + L
Sbjct: 331 NFSMKVTMALYPSRLSRHSDTALPAPDTAGGHELLEHLVVQGLRGQLRTGSLLTGQLYVA 390
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
K+ S + + +++ ++ + + + + I +NLN +
Sbjct: 391 LDMFPKAPRASVDVHRTPVELPTVPNTLDELQVQIADIARKLDQVP-FDRIGNNLNGALA 449
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
EL ++ + A + + T + + +D
Sbjct: 450 HANELFGHLD--------QQVVPQAHDTLAAAQRTFDAAESTLRQNSP--------MQSD 493
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ ++ L T+ + + ER+P+ +++G+
Sbjct: 494 VHEAMQSLTHTLQSLNALADYLERHPEALLFGK 526
>gi|186472383|ref|YP_001859725.1| hypothetical protein Bphy_3535 [Burkholderia phymatum STM815]
gi|184194715|gb|ACC72679.1| Mammalian cell entry related domain protein [Burkholderia phymatum
STM815]
Length = 531
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/396 (8%), Positives = 96/396 (24%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
S+ + + + ++ + G++VG LD + +
Sbjct: 168 ESLGSIDIGAPIFYHRVQAGQVVGYSLDPRGAG-VIVTVFVN------------------ 208
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH-- 164
Y + + + + T S + S D+ +
Sbjct: 209 --APYDQYVRTNTRWWHASGVDLRLDSNGLKLNTQSLATVVVGGLAFQSPTGQDAGQPAA 266
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ + V+ + + V + +
Sbjct: 267 DKAVFRLAADEPDAMREPDGPPLNVIMRFNQSLRGLSVGAPVDLRGIALGQVTDIGIEYN 326
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + L + + H V E + G +
Sbjct: 327 EKQKSFSMKVSMALYPDRLSRRSSEALPAPDTPGGHELLQHLVMEGLRGQLRTGNLLTGQ 386
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
L + + + ++ + I +NLN
Sbjct: 387 LYVALDMFPKAPRATVDVHGNPIELPTVPNTLDELQVQIADIARKLNQVPFDKIGANLNG 446
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + L ++ + A+ + + T +
Sbjct: 447 ALENANRLFGHMD--------TEVVPQARDTLAAAQKTFSTAESTLRQTAP--------M 490
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+D+Q+ +++L T+ + + ER+PQ +++G+
Sbjct: 491 QSDVQDAMQQLTRTLQSLNTLADYLERHPQALLFGK 526
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/102 (20%), Positives = 37/102 (36%), Gaps = 3/102 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS---LAKALIRPDT 91
DGP VI+R S+ GLS + V GI +G++ + ++ S + PD
Sbjct: 285 DGPPLNVIMRFNQSLRGLSVGAPVDLRGIALGQVTDIGIEYNEKQKSFSMKVSMALYPDR 344
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
S+ A G ++ + + + Q
Sbjct: 345 LSRRSSEALPAPDTPGGHELLQHLVMEGLRGQLRTGNLLTGQ 386
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 6/79 (7%), Positives = 27/79 (34%), Gaps = 2/79 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L ++ ++ + ++ + +G+ + V++ + +G + + L
Sbjct: 21 LIWLVPLVSALIGMALVARSIADKGPLVTVTFNNAEGMEAGKTKVKYKDVEIGAVQAVTL 80
Query: 74 DQEYPNHSLAKALIRPDTP 92
+ + + D
Sbjct: 81 SSD-LRRVIVSIQLSKDAE 98
>gi|114764611|ref|ZP_01443815.1| paraquat-inducible protein, putative [Pelagibaca bermudensis
HTCC2601]
gi|114542987|gb|EAU46007.1| paraquat-inducible protein, putative [Roseovarius sp. HTCC2601]
Length = 794
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/427 (8%), Positives = 114/427 (26%), Gaps = 24/427 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-----FLDQEYPNHSLA 83
S +Q ++++ SV GL + V + G+ +G + L + E A
Sbjct: 277 SVFSQSIDNAVDLVVEFDESVRGLEAGAPVTYRGLKIGAVNALGAFIDDVSGEQRVKLRA 336
Query: 84 KALIRPDTPLYPSTTAT-------IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
I P TA + G+ S + + ++ T
Sbjct: 337 SISIDPRALGLEDDTAAEAEIITFLSESVQDGLRARLASQGLFSQSLMVELVTIPEAEPA 396
Query: 137 ITATPSGINYFISNAE----NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + E + + + I + +
Sbjct: 397 ALGIFDTEAPVLPSVESNVPDVAATAEGLFQRIDDLPVEELMEQAIATLRSVESFAGDPD 456
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ + S+ T +L ++ + + ++ + E + + +
Sbjct: 457 LRAVPGSVSGLLDEARGLIGSEETQALPGELNATVTALREIVEDLREAGTAEKLAAALDG 516
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS-NM 311
++D V + ++ T+ + +++ L++ ++ +
Sbjct: 517 ATAATDSVSSVATEITAATEEVPALIEEMRDLVAKANALQLEAFVDRATALADSADRLIA 576
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK-ENNSLFK 370
+ A+ + + + + + ++++ + + + +
Sbjct: 577 SDATQALPGEINATVAELRGVAEDLRAADAIGRLMSTLESASAAADSVTGVAMDLSGATE 636
Query: 371 DAQRAMHTFRDTSEKINRY-----IPSIGNNLQNFSQ-SGLNDIQNLVRKLQETVNHFDD 424
+ R E N I N + + + + + L L ++
Sbjct: 637 QVPALVDDLRRLVETANDLPLEAFIEQATNLVASADRLVDSDQTRALPGALTRMLDEARS 696
Query: 425 CLNNFER 431
L
Sbjct: 697 ALEELRE 703
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 39/384 (10%), Positives = 101/384 (26%), Gaps = 9/384 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LS + + GI VGRI L + A D + ST +
Sbjct: 169 LSAGAPIFHQGIEVGRIETPRLLESGNGVIADAFIEAPHDRRVTTSTRFWDTSGFNVNFG 228
Query: 111 YIELSTLRKEKKTIFQIATERNQRAM-ITATPSGINYFISNAENTSKKISDSSRHIQKII 169
L + + + PS + + + E ++ S +
Sbjct: 229 PQGLDLSVGSVAALIRGGIAFDTVVSGGNPVPSRYVFDLFDDETAARDSVFSQSIDNAVD 288
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+E + T I ++ + K + D +
Sbjct: 289 LVVEFDESVRGLEAGAPVTYRGLKIGAVNALGAFIDDVSGEQRVKLRASISIDPRALGLE 348
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
A + + + + E++Q + S ++ T + I +
Sbjct: 349 DDTAAEAEIITFLSESVQDGLRARLASQGLFSQSLMVELVTIPEAEPAALGIFDTEAPVL 408
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS-NLNDSSQK 348
+ + ++A + + I + Q I + + +L
Sbjct: 409 PS-----VESNVPDVAATAEGLFQRIDDLPVEELMEQAIATLRSVESFAGDPDLRAVPGS 463
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY-IPSIGNNLQNFSQSGLND 407
+ L+ + + +E +L + + R+ E + + + + +
Sbjct: 464 VSGLLDEARGLIGSEETQALPGELNATVTALREIVEDLREAGTAEKLAAALDGATAATDS 523
Query: 408 IQNLVRKLQETVNHFDDCLNNFER 431
+ ++ ++ +
Sbjct: 524 VSSVATEITAATEEVPALIEEMRD 547
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 46/438 (10%), Positives = 117/438 (26%), Gaps = 28/438 (6%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYP 78
+ +I L + A + I + G+ +++RF + +G + +
Sbjct: 22 IAALAITLLIAWQSWAERGARIEITF-ENAAGIVPGETALRFRDVNIGLVEDVTFA-NDL 79
Query: 79 NHSLAKALIRPDTP--LYPSTTAT-----IRTQGLAGITYIELSTLRKEKKTIFQIAT-- 129
+ A I L + G++G++ + + + A
Sbjct: 80 SSVRIGARIDNIVAESLPSDAEFWVVRPEVSASGISGLSTVLSGVYIEAAFEPQEGAEAT 139
Query: 130 --ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
E A + + A + + + + Q I + + I+
Sbjct: 140 RFEGRDTAPLVRPGMRGTRIVLRAPDGAMLSAGAPIFHQGIEVGRIETPRLLESGNGVIA 199
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
T + + + S+ +I+ N
Sbjct: 200 DAFIEAPHDRRVTTSTRFWDTSGFNVNFGPQGLDLSVGSVAALIRGGIAFDTVVSGGNPV 259
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
S F D+ ++ ++ + D + + + +
Sbjct: 260 PSRYVFDLFDDETAARDSVFSQSIDNAVDLVVEFDESVRGLEAGAPVTYRGLKIGAVNAL 319
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ + R I +E+ T+ + +E + + + A +
Sbjct: 320 GAFIDDVSGEQRVKLRASISIDPRALGLEDDTAAEAEIITFLSESVQ--DGLRARLASQG 377
Query: 368 LFKD--------AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL----VRKL 415
LF A + +PS+ +N+ + + + Q + V +L
Sbjct: 378 LFSQSLMVELVTIPEAEPAALGIFDTEAPVLPSVESNVPDVAATAEGLFQRIDDLPVEEL 437
Query: 416 QETVNHFDDCLNNFERNP 433
E + +F +P
Sbjct: 438 MEQAIATLRSVESFAGDP 455
>gi|289570058|ref|ZP_06450285.1| MCE-family protein mce3C [Mycobacterium tuberculosis T17]
gi|289543812|gb|EFD47460.1| MCE-family protein mce3C [Mycobacterium tuberculosis T17]
Length = 428
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 84/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL ++V +G PVG++ + LD L + + D L
Sbjct: 65 FFNQGTRVSAYF-ADAGGLRIGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 120
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 121 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 171
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 172 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 231
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 232 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 291
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 292 ALDKLNGVLAIVENRKERVRQA 313
>gi|262202876|ref|YP_003274084.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262086223|gb|ACY22191.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 394
Score = 71.9 bits (173), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/281 (14%), Positives = 78/281 (27%), Gaps = 12/281 (4%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+ LF+V + + + G EV +V GL + V G+PVG++
Sbjct: 43 LALFIVVGVS---GCSFIPAGWKVGLGQAIEVTAYF-DNVAGLYESNDVAVLGMPVGQVT 98
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ I D P+ TA I + +IELS + +
Sbjct: 99 KVEPQGN---RVKVTFTINKDVPVPAEATAAIVNTSIVTTRHIELSPAYEGGPKL----- 150
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
E T P + + + + + + I+ N + I
Sbjct: 151 EDGGVVKQTKAPVSVGELFDSIDQLVVALGGDGNGAGPLADMIDITSGIASGNGQAIREA 210
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
L S + + + + + Q + E
Sbjct: 211 LNQLGSASEVVSGNSDTLRQLVITIQGLTSKLVANYPKMTAFSNSVNQVAMLLREQSPGL 270
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + NT ++ T T ++ L ++ S
Sbjct: 271 LATLGDLNTALQNTTSFLQNNTGTISSSLGRLAALAANLSD 311
>gi|312130858|ref|YP_003998198.1| mammalian cell entry related domain protein [Leadbetterella
byssophila DSM 17132]
gi|311907404|gb|ADQ17845.1| Mammalian cell entry related domain protein [Leadbetterella
byssophila DSM 17132]
Length = 308
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 41/107 (38%), Gaps = 3/107 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ VG+ + L ++ +L ++ + E + V GL ++V +NG+
Sbjct: 4 SKEVKVGILGIIGLVLLYYGFNFLKGTDIFSS-TREYKLTFKD-VMGLEVSNTVSYNGVQ 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
VGR+ + + E ++ + + + + GL G
Sbjct: 62 VGRVASVTPNYEKDE-VDVVVALKKEVTVTDQSEMILADDGLVGGKI 107
>gi|145223097|ref|YP_001133775.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215583|gb|ABP44987.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 367
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/311 (12%), Positives = 90/311 (28%), Gaps = 4/311 (1%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
GL+ + V +GI VG + + LD +L I L TTA
Sbjct: 41 RYQALFTE-AGGLTVGNDVTVSGIKVGSVSSIKLD---NGDALVGFTIDGKYALGSDTTA 96
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
IRT L G + L + Q+ + + T + + + ++ ++
Sbjct: 97 HIRTGTLLGERVLALDSEGSGTLDPQQVIPTTRTSSPYSLTDAVSELTSNTRDTDTEALN 156
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
S + + ++ I L T + +S L + + +++ T ++
Sbjct: 157 QSLDTLSQTLDQIAPQLGPTFDGLSRLSQSLNSRNDSLAELLRTAGEVTGIFSERSKQVN 216
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
L ++ + + +L NI S + E + +
Sbjct: 217 TLILNSNDLLAVLNERRYAITSLLSNISAVSQQLSGLVADNEAELAPALERLNNVTRMLE 276
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
K L+ + + N ++ + +I
Sbjct: 277 KNRDNLARMLPGAAKYYLTQGEIVSNGAYYNALVPNVQPAQLLQPFLEYAFGFRNGVDIG 336
Query: 340 SNLNDSSQKFA 350
+++ +
Sbjct: 337 QPPDNAGPRAQ 347
>gi|262279624|ref|ZP_06057409.1| paraquat-inducible protein [Acinetobacter calcoaceticus RUH2202]
gi|262259975|gb|EEY78708.1| paraquat-inducible protein [Acinetobacter calcoaceticus RUH2202]
Length = 566
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/403 (9%), Positives = 106/403 (26%), Gaps = 39/403 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + N + Q
Sbjct: 200 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGKN---------------------VELQTF 238
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S ++
Sbjct: 239 IRAPYDKFVTTDARFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGYPESSHATMAAN 298
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ N+ + + + H + + ++
Sbjct: 299 QSRFNLWDSKGEALKEPDGQPRGVIMYFDHSLRGLTVGAPIDFMGIEIGNVKSVNAEFYD 358
Query: 227 LDKMIKA-IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
K I+ ++ +EN Q + N D + + T + +D
Sbjct: 359 HYKQIRMRVEAVIYPSRVENGQALNPNSEIFKDFIEHGWRAQMRTGNLLTGQNYIALDKF 418
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + + ++ + +N+N
Sbjct: 419 PKAKPATLQILGDNRVVIPTTPTELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLNNMNT 478
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ + Q + R T + S
Sbjct: 479 AIESTDKLVKQLDG--------KVAPGLQATLDDVRKTVRSSESILSSDAP--------L 522
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
D++ ++++ + E++P+ I+ G+ +
Sbjct: 523 QQDVRKALQQMTRAAASLQLMSDYIEQHPESIIRGKTPEADDE 565
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
DG VI+ S+ GL+ + + F GI +G + + + ++ +
Sbjct: 316 DGQPRGVIMYFDHSLRGLTVGAPIDFMGIEIGNVKSVNAEFYDHYKQIRMRVE 368
>gi|126642249|ref|YP_001085233.1| paraquat-inducible protein [Acinetobacter baumannii ATCC 17978]
Length = 531
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/396 (9%), Positives = 107/396 (27%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 165 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 203
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 204 IRAPYDKFVTTDTRFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 263
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + + H + + + +I +
Sbjct: 264 KSRFNLWDSKAEALKEPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYN 323
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 324 NYKQIRMRVEAVIYPSRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 383
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + N+N
Sbjct: 384 PKAKPATLQILNDGRVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 443
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ A + D ++ + +
Sbjct: 444 AIESTDKLVKQLDGKVA-PGLQATLDDVRKTVRSSESILSS---------------DAPL 487
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 488 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGK 523
Score = 44.5 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
VI+ S+ GL+ + + F GI +G I + + +
Sbjct: 287 VIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVE 333
>gi|323719533|gb|EGB28659.1| MCE-family protein mce3C [Mycobacterium tuberculosis CDC1551A]
Length = 408
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 65 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 120
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 121 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 171
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 172 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 231
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 232 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 291
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 292 ALDKLNGVLAIVENRKERVRQA 313
>gi|41409705|ref|NP_962541.1| hypothetical protein MAP3607 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41398537|gb|AAS06157.1| hypothetical protein MAP_3607 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 537
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/407 (10%), Positives = 111/407 (27%), Gaps = 42/407 (10%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+G V+ L + W Y+ ++ + + L V+ G+ VG
Sbjct: 20 VILGSLVIV-LALVVGYVGW----RLYEKLTNNTVVAYFPAANALYPGDKVQIMGLRVGA 74
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I + + + + + +A I L I+L K +
Sbjct: 75 IDKIEPSGD---KMKVTFHYQNKYRVPANASAVILNPTLVASRAIQLEPPYKGGPVLADN 131
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
A +R + P + ++ N K+ ++ + + + +
Sbjct: 132 AVIPEERTQV---PVEWDQLRNSITNIISKLGPTAEQPKGPFGEVIESFADGL------- 181
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
A + + + + +L D Q+ + +N+
Sbjct: 182 ---AGKGKQFNTTLTNLSRALTALNEGRGDFFAVVRSLALFVNALHQDDQQFVALNQNLA 238
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL----LSDFSSKMKSKETSAFLEN 303
+ S + N + T + K + + + + + L
Sbjct: 239 DFTTRLAHSDGDLANAIEQFDSLLTTVRPWLDKNRGVLTYDVKNLETATNALLQPDPLNG 298
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ + + ++ + I +I + I +I N + + + +
Sbjct: 299 LETALHVLPTAAANINQIYHPSHGSVVAIPSITNFANPMQFICSAIQA-----GSRLGYQ 353
Query: 364 ENNSLFKD-AQRAMHTFR-----------DTSEKINRYIPSIGNNLQ 398
E+ L + + T+E + + + LQ
Sbjct: 354 ESAELCAQYLAPILDAIKFNYPPFGLNLFSTAETLPKEVAYSEPRLQ 400
>gi|282866022|ref|ZP_06275070.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
gi|282559061|gb|EFB64615.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
Length = 409
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 50/137 (36%), Gaps = 7/137 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F+V + + + +Y G V +++P + GL T S V
Sbjct: 1 MITLATRLKNIAFLVIAVLVLGYLGVRYADLGRYVGLRDYYTVKVQLPQT-GGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + A+ I D P+ S A + G YI+L
Sbjct: 60 TYRGVSVGRVGPIELTDDG---VEAELRIENDAPPIPDSLRAVVAGLSAVGEQYIDLRPT 116
Query: 118 RKEKKTIFQIATERNQR 134
R + + +
Sbjct: 117 RADGPFLGNGSVIDQAD 133
>gi|311744210|ref|ZP_07718014.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311312383|gb|EFQ82296.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 376
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 23/112 (20%), Positives = 38/112 (33%), Gaps = 5/112 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F + + S DG E + L+ VR G+ VGR
Sbjct: 13 ARFGIFALVSVI--VTSALVGIIGGVGDGTFTEYRAVYT-NASELAPGDDVRVAGVAVGR 69
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
I + + ++ + D L T A++R L G Y+ L+
Sbjct: 70 IKDVDFEGRD--RAVVTFEVLEDVALTDRTEASVRYLNLIGDRYMALTEGPP 119
>gi|146277491|ref|YP_001167650.1| hypothetical protein Rsph17025_1451 [Rhodobacter sphaeroides ATCC
17025]
gi|145555732|gb|ABP70345.1| Mammalian cell entry related domain protein [Rhodobacter
sphaeroides ATCC 17025]
Length = 156
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 24 SIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
+ + ++ D + S +G+S + VR G+ VG + L L+ + +
Sbjct: 21 FLVYAGQTAGITRDSGSYPLTASF-RSAEGISVGTDVRLAGVKVGTVTALALNPQTF-FA 78
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
A ++ L + I ++GL G Y+EL + E Q
Sbjct: 79 DATISVKQGIELPTDSAILISSEGLLGGNYVELMPGGALENLAPGEEIEDTQ 130
>gi|15841443|ref|NP_336480.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|298525462|ref|ZP_07012871.1| virulence factor Mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|13881682|gb|AAK46294.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|298495256|gb|EFI30550.1| virulence factor Mce family protein [Mycobacterium tuberculosis
94_M4241A]
Length = 440
Score = 71.5 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 65 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 120
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 121 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 171
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 172 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 231
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 232 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 291
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 292 ALDKLNGVLAIVENRKERVRQA 313
>gi|262201467|ref|YP_003272675.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262084814|gb|ACY20782.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 347
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/310 (13%), Positives = 107/310 (34%), Gaps = 11/310 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+ + L + ++ + AE+ + GL+T V G+P GRI
Sbjct: 36 GIITLLTLMLIAIGVPQINYHARTSPFTAEL-----ANASGLTTADPVLVAGVPAGRIEA 90
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ L + + D PL T AT+R + + G Y+E+ +
Sbjct: 91 IDLAGD---RVRVGFRLDNDLPLGNQTRATVRPRTVLGKRYLEIIPA-GRGEVGPGNTIP 146
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
++ + + + + + I L ++A + +
Sbjct: 147 LSRTTVPYNLDDISSAAVHTSREIDSGAVRAMIATMNQIMPNGTTLDASMAGAAGATAAI 206
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
+ +D+++ ++ + ++ + T + A+ + ++++N+++
Sbjct: 207 TETGAQLDQLLVVSKKLAEVTAQQSDSVSSAFSSTQIIVQTLAVRRMVLTRLVDNLRIVL 266
Query: 251 NNFVKSSDQVI--NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + Q+ + V+++ T T + ID +L M++ + N AD
Sbjct: 267 DQMATTFPQIPMGDLVNNIASVTTTLKSNVTTIDGILEQLPPAMRTITDATGNGNWADVV 326
Query: 309 SNMRSSISAI 318
S +
Sbjct: 327 SPSAVIPDNM 336
>gi|262201126|ref|YP_003272334.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262084473|gb|ACY20441.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 445
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/290 (10%), Positives = 81/290 (27%), Gaps = 17/290 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ V + + + +++W+ ++ +V G+ S VR G+ V
Sbjct: 19 RHIVVLVIGLILALILAGALWWV----FSSMGTTKITATFHRTV-GIYEGSDVRVLGVAV 73
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + E + L A + Y++L+
Sbjct: 74 GKVDSVEPQGET---VKVTMTVDRGVELPADVRAVQIIPSVVADRYVQLAPAYSGGPKAS 130
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ T T P ++ + E+ SK + + + + ++
Sbjct: 131 RDITLGLD---KTLVPVEVDQIYRSVEDLSKALGPQGANKEGAVSDV------IATGAAN 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ I + S + ++ S + A Q Q+
Sbjct: 182 LQGNGQKLGDAIKNLSGAATTLSDSRGNLVDTIKNLNVFVSALRENDAQVRQFNTQMASF 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q + + + + + + + ++I L D ++
Sbjct: 242 NQFLAGERNQLAASLNKLSIALGDVATFLADNREQIGETLKDLQPTTQAL 291
>gi|116619715|ref|YP_821871.1| hypothetical protein Acid_0580 [Candidatus Solibacter usitatus
Ellin6076]
gi|116222877|gb|ABJ81586.1| Mammalian cell entry related domain protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 357
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 5/122 (4%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + VG+ ++ I+ L+ S + A + + G++ + VR N
Sbjct: 6 KVRWSQLKVGILGLAAFLILSVLIFLLTSSRGFFQKTAILYTYM-DDASGMAEGTPVRLN 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP----LYPSTTATIRTQGLAGITYIELSTL 117
G +G + + L + +++ + + A I L G +I ++
Sbjct: 65 GFTIGSLDAIQLTTSNEAKKSVQFVMKVQEKYLPQIPVDSVAGISAANLLGDKFINITKG 124
Query: 118 RK 119
R
Sbjct: 125 RD 126
>gi|302560794|ref|ZP_07313136.1| virulence factor Mce family protein [Streptomyces griseoflavus
Tu4000]
gi|302478412|gb|EFL41505.1| virulence factor Mce family protein [Streptomyces griseoflavus
Tu4000]
Length = 358
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 63/186 (33%), Gaps = 5/186 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G + GL VR G+ GR+ G+ LD + D +
Sbjct: 52 FGGGTQYSADFSE-AAGLDEGDEVRIAGVKAGRVTGVALDG---ARVKVTFEVE-DAWIG 106
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
TTA I + L G Y+ L L ++ + T + + + +
Sbjct: 107 DRTTAAIAIKTLLGDKYLALDPLGSRRQDPGTRIPLTRTTSPYDVTQAFQDLGSTVGDID 166
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
++++++S I EN + + +S ++ + + +++ + + ++
Sbjct: 167 TRRLAESFETISDTFENSPPHVRNAADGLSALSKSVSKRDAELSELLKGSARFTKTLENH 226
Query: 215 NTFNTI 220
+
Sbjct: 227 KSSFET 232
>gi|284034017|ref|YP_003383948.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
gi|283813310|gb|ADB35149.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
Length = 431
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 5/130 (3%)
Query: 3 SKNYYTSVGLFVVSILF-FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ + +F++ + ++ + V S G+ + + V +
Sbjct: 4 TRTVRIQLMVFLLITVVGIAYVGGKYAQIDKLLFDDDYTVSASFAES-GGIFSGAEVTYR 62
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G PVGR+ L L + I + + A + + G Y++L R
Sbjct: 63 GQPVGRVGELRLLDDG---VQVDLDIDQEVKIPNDLVAVVANRSAIGEQYVDLQPRRDTG 119
Query: 122 KTIFQIATER 131
+ +T
Sbjct: 120 PYLQDRSTIA 129
>gi|189348333|ref|YP_001941529.1| paraquat-inducible protein B [Burkholderia multivorans ATCC 17616]
gi|189338471|dbj|BAG47539.1| paraquat-inducible protein B [Burkholderia multivorans ATCC 17616]
Length = 555
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/453 (9%), Positives = 114/453 (25%), Gaps = 60/453 (13%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY------------------DGPMAEVIIRIPGSVD 50
+G +S L Y + + D + S+
Sbjct: 137 RIGATGISGLGTLLSGAYIGADLGRSPQKETAFTGLETPPAVTADQQGRRYRLH-GDSLG 195
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ S V + + VG++VG LD++ + + P
Sbjct: 196 SIDIGSPVFYRHLQVGQVVGFSLDEKGTG---VDVQVFVNAP------------------ 234
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKI 168
Y + + + + T S + ++ +
Sbjct: 235 YDKYVDNNTRWWHASGVDLRLDSNGLKLNTQSLATVVVGGLAFQSPPGQPDAPQAADNAS 294
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
T V+ + + V N +
Sbjct: 295 FRLAPDEADAMRDPDGTPLMVVMRFDQSLRGLSVGAPVDLRGIALGQVTNIGIEYNERTR 354
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ + L ++ ++ H V + + G + L
Sbjct: 355 NFSMKVTMALYPSRLSRHSDTALPAPDTAGGHELLEHLVVQGLRGQLRTGSLLTGQLYVA 414
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
K+ S + + +++ ++ + + + + I +NLN +
Sbjct: 415 LDMFPKAPRASVDVHRTPVELPTVPNTLDELQVQIADIARKLDQVP-FDRIGNNLNGALA 473
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
EL ++ + A + + T + + +D
Sbjct: 474 HANELFGHLD--------QQVVPQAHDTLAAAQRTFDAAESTLRQNSP--------MQSD 517
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ ++ L T+ + + ER+P+ +++G+
Sbjct: 518 VHEAMQSLTHTLQSLNALADYLERHPEALLFGK 550
>gi|300782538|ref|YP_003762829.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|41581802|gb|AAS07746.1| putative secreted protein [Amycolatopsis mediterranei S699]
gi|299792052|gb|ADJ42427.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 394
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/370 (10%), Positives = 97/370 (26%), Gaps = 16/370 (4%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G + +L W D + G+V GL +SVR G+ +G +
Sbjct: 13 GFTIAIVLALVVAGGIW---WTLKDAGRNHLTAYFAGAV-GLYEGNSVRMLGVDMGTVTK 68
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ + A I L Y++L+ I A
Sbjct: 69 ITPMGN---QVKVDFEYDRSVAVPADAKALIVAPSLVSDRYVQLAPAYTGGPRISDGAVI 125
Query: 131 RNQRAMITAT---------PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
R + + A + + + + N + T
Sbjct: 126 GLDRTEVPLEVDQLAASLARVSETLGPNGANKSGSLSNLLNTAAANVDGNGKALHDTITK 185
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ T+ N + + + + +DS + + + + +
Sbjct: 186 LGQAAGTLSGNKDDLFSTVENLGKFSQTLADSDKQVRSFESQLAGVSGYLASEKDNLAAT 245
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + +V + + + + L
Sbjct: 246 VQQLGTTLTAVQAFIDANHDRLKSNVDKLAGITKVLVDQRSSLAEILDVAPVGLSNLVNT 305
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
N A T + R +++ + + + + I L ++ + A ++ K+ + +
Sbjct: 306 YNGAAGTLDARPNLNELTQPPLVMICRLLKQVGSKGIPDVLGNACESIAGVVDKVIPLPS 365
Query: 362 LKENNSLFKD 371
+ + +
Sbjct: 366 VAQTVQALQS 375
>gi|312137898|ref|YP_004005234.1| mce family lipoprotein mce1b [Rhodococcus equi 103S]
gi|311887237|emb|CBH46546.1| putative Mce family lipoprotein Mce1B [Rhodococcus equi 103S]
Length = 348
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 36/106 (33%), Gaps = 5/106 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
V F + LS + D V V+GL + V G+ VGR
Sbjct: 9 AKVLGFCAVGAACASLVANTLSVPVRGDSERYTVE---FTDVEGLHEGNPVTMAGVRVGR 65
Query: 68 IVGLFL--DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + + ++ + + L +TTA +R + G Y
Sbjct: 66 VDSIAFADAGGGTSKAVVGIEVSSEHSLDRNTTAAVRYGDMLGARY 111
>gi|120405347|ref|YP_955176.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958165|gb|ABM15170.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 483
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 72/297 (24%), Gaps = 12/297 (4%)
Query: 3 SKNYYTSVGLFVVSILFFS--FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
S+ + LF+ L Y + + VI+ +P GL +V +
Sbjct: 4 SRRIRIQLALFMAVTLGAFGVLGFGYLNAPATWLGVGRYTVIVELPD-AAGLYATGNVSY 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G VGR+ + L + A +R D P+ A + + G Y+ L+
Sbjct: 63 RGTNVGRVTDVRL---GASGVEAVLSLRTDVPIPSDLDAAVHSVTAIGEQYVALTP---- 115
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + +++ +++ +
Sbjct: 116 --RAAAPPLRDGDVIPRDRASVPPDVNTLLESTNRAFEAIPDQNLSVLVDESYRAFGGLG 173
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ I K + + T A +
Sbjct: 174 PELARIVEGSTRLAVDARKNLEPLVALIEGTAPVLDTQVDTSAAIQDWSSQMAEIAGQFR 233
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
E + S D++ + T + + + ++
Sbjct: 234 DRDEELAGVLEKVGPSFDELQTLFQRFQPTLPVLMANLVTVGQVAVAYQPALEQLLV 290
>gi|260549453|ref|ZP_05823672.1| paraquat-inducible protein [Acinetobacter sp. RUH2624]
gi|260407562|gb|EEX01036.1| paraquat-inducible protein [Acinetobacter sp. RUH2624]
Length = 566
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/396 (9%), Positives = 106/396 (26%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 200 DDLGSLDIGSPIYYRRINVGQITAYNLADDGK---------------------SVELQTF 238
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 239 IRAPYDKFVTTDARFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 298
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + H + + + +I +
Sbjct: 299 KSHFNLWDSKAEALKEPDGQPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSVKSINAEFYN 358
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN + N D V + T + +D
Sbjct: 359 NYKQIRMRVEAVIYPSRVENGLALNPNSEIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 418
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ +++ + + + + + + ++ + N+N
Sbjct: 419 PKAKPATLQTLNDGRVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 478
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ A + D ++ + +
Sbjct: 479 AIESTDKLVKQLDGKVA-PGLQATLDDVRKTVRSSESILSS---------------DAPL 522
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 523 QQDVRKALQQMTRAAASLQLMSDYIEQHPESIIRGK 558
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
DG VI+ S+ GL+ + + F GI +G + + + +
Sbjct: 316 DGQPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSVKSINAEFYNNYKQIRMRVE 368
>gi|120401940|ref|YP_951769.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954758|gb|ABM11763.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 427
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 69/268 (25%), Gaps = 9/268 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G V S G+ T VR G+ VG+I + E + +
Sbjct: 32 GNRTHVTAYFTNS-TGIYTGDDVRILGVRVGQIDTIEAQPE---QVKITFWVDDRYKIPA 87
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
A I + L I+L + A +R + + + +
Sbjct: 88 DAQAVILSPSLVSARAIQLVPAYDGGPVMPTQAVIPLERTAVPVEWDDLRGQLQKLVDAL 147
Query: 156 KKISD-----SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ + EN+ I +S + H D + T +
Sbjct: 148 QPTQPGGISTVGAFVNMAAENLRGSGADIHDTIIQLSQAFSALGDHSDDVFATIRDLSLV 207
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + + A+ + ++ I ++ + + V
Sbjct: 208 VTALQESKDVLRALNDNLAATTALLANQPGEVDRAIADINDVVTEVTGFAAENREPVGTA 267
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + ++ L D + T
Sbjct: 268 SDLLASISDTLNRSLDDIKQTLHVAPTQ 295
>gi|108797100|ref|YP_637297.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866185|ref|YP_936137.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108767519|gb|ABG06241.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692274|gb|ABL89347.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 528
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/291 (12%), Positives = 83/291 (28%), Gaps = 6/291 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ GL + IL + G G++ VR G+
Sbjct: 7 SNRLRGGLMGIIILVLVVGVGQSFASVPMLFAKPRY--FAQFGDTGGINPGDKVRIAGVD 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG ++ ++ + + + T + + A IRT + G IE+ E
Sbjct: 65 VGEVLKTEIEGD---KVVVGFTL-GGTQIGSDSRAAIRTDTILGRKNIEIEPRGSEALQS 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + S + +K + +S + + I+ L+ + +
Sbjct: 121 NGVLPLGQTTTPYQIYDAFFDLTKSASGWDTKSVRESLNVLSETIDQTYPHLSAALDGVA 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
S + + +++ ++ + V Q+LE
Sbjct: 181 RFSDTIGKRDEQLKQLLANANKIAGVLGERSGQVNALLVNAQTLLAAINERSYAVGQLLE 240
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ S D N + + + ++ L+ ++ K
Sbjct: 241 RVSAFSEQVEGFIDDNPNLNRVLEQLRVISDILVERKFDLVDVLTTLSKFT 291
>gi|326382398|ref|ZP_08204090.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199128|gb|EGD56310.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 334
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
Query: 1 MESKN-YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ K+ T + + + + + DGP +E GL VR
Sbjct: 1 MKLKSLTPTIIKIVAFAAVIGVLTYVIIAILEPSSDGPSSERSAVFSD-ASGLKPRDGVR 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G+ VG + + L ++ + D + +TTA +R Q L G Y
Sbjct: 60 LAGVKVGYVTAIDL---KGATAVVHFQLNDDVTITSNTTAAVRYQNLLGQRY 108
>gi|326382977|ref|ZP_08204666.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198113|gb|EGD55298.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 413
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/322 (9%), Positives = 92/322 (28%), Gaps = 14/322 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ + +F V + + +R ++ G + G+ +++ V +
Sbjct: 1 MTSRLVKIQLIVFAVIGVLAIVYVGAKYARLDKLVGVSTYKVTLHMPDASGVFSNAEVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+PVG + + + + P + S A + + G +I+L
Sbjct: 61 RGVPVGLVGDMTMVPNG---VDVTLNMNSGAPKVPASAKAVVANRSAIGEQFIDLQPTSS 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + + ++S + LT
Sbjct: 118 AGPYLVNGSQIEGAQMPPKLQDVIADTITLTKTIPVDQLSSVIHELGTAFNGKGDDLTHL 177
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I++++T+S NI I +++ N + + +
Sbjct: 178 ISSLDTLSKSGVRNIEPITQLIQN----------SNVVLSTQAEQSDDILAWSKNLDKVS 227
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q++ + + +++ ++ ++ + + + +
Sbjct: 228 AQLVSSDPAIRRILTDAPRAATALSTFLQDNGADATKLIHQLGETVHTAAPASFATGATF 287
Query: 300 FLENIADSTSNMRSSISAIREI 321
+ + + S+ +
Sbjct: 288 AMLSALSAGSHSAAPGDGQIHF 309
>gi|308379087|ref|ZP_07484970.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu010]
gi|308358260|gb|EFP47111.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu010]
Length = 397
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/262 (11%), Positives = 85/262 (32%), Gaps = 13/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 65 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 120
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T I+T+GL G +++++ + + I T S + +
Sbjct: 121 GNRTEVAIKTKGLLGSKFLDVTP---------RGDGRLDSPIPIERTTSPYQLPDALGDL 171
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+ +A +D+ + + ++
Sbjct: 172 AATISGLHTERLSESLATLAQTFADTPAHFRNAIHGVARLAQTLDERDNQLRSLLANAAK 231
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ L ++ + N ++Q+ + + R+ +
Sbjct: 232 ATGVLANRTDQIVGLVRDTNVVLAQLRTQSAALDRIWANISAVAEQLRGFIAENRQQLRP 291
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ + ++ + +++
Sbjct: 292 ALDKLNGVLAIVENRKERVRQA 313
>gi|306968085|ref|ZP_07480746.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu009]
gi|308354210|gb|EFP43061.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu009]
Length = 416
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/339 (9%), Positives = 86/339 (25%), Gaps = 11/339 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V++ + R+ ++ + +G+ V G+PVG+IV +
Sbjct: 4 VLATALVLVAGVILAMRTADAAARTT--VVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEP 61
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + A I + L I+L+ T+ +
Sbjct: 62 QP---LRAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQE 118
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKPLTTTIANIETIST 188
R ++ + + + +N+ T I +S
Sbjct: 119 RTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTIIKLSQ 178
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H + T + + + + + + ++ ++I + +
Sbjct: 179 AISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIGQAAED 238
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADS 307
+ + + + + D L + S NI +
Sbjct: 239 LNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEP 298
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + A + + + I +
Sbjct: 299 ANGALTGALAGNNMANPIAFLCGAIQAASRLGGEQAAKL 337
>gi|330991191|ref|ZP_08315144.1| Paraquat-inducible protein B [Gluconacetobacter sp. SXCC-1]
gi|329761777|gb|EGG78268.1| Paraquat-inducible protein B [Gluconacetobacter sp. SXCC-1]
Length = 323
Score = 71.5 bits (172), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/298 (11%), Positives = 86/298 (28%), Gaps = 12/298 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T+VG FV+ +I + + + P ++ V+GL + V F
Sbjct: 1 MAER--QTTVGAFVLGGALLGVTAIALFGQFHPF-SPTNRAMVIFDSPVNGLGVGAPVTF 57
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+G+ VG + + + + + + + + A + L L
Sbjct: 58 DGVQVGHVDHIAVQFDPQTHQAYIPVTLELEANGA----RMAGSHGRALDTKELPRLIEN 113
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ Q + +T P + + S + PL
Sbjct: 114 GLRAELHMQSFVTGQEEIDLTFDPGVPAKLHPGLSPLIEIPARESDMQKLTDALTALPLK 173
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
N + + + +D+ + + + + + D T + +
Sbjct: 174 NIANNADAMLVSIRTLADKLDRDLPPLVDSVRA--TSDHTRVTVDTATDAIRDLDHRMDG 231
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ I + D++ + + +T + + + + S+ +
Sbjct: 232 TLASINHLADTGTAQLDARGDELHTLLVNSNDTVTEARGALAGLHDITAPSSADRSNI 289
Score = 44.5 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 21/173 (12%), Positives = 57/173 (32%), Gaps = 4/173 (2%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ-KII 329
+ L ++ + + + + + D +
Sbjct: 150 LIEIPARESDMQKLTDALTALPLKNIANNADAMLVSIRTLADKLDRDLPPLVDSVRATSD 209
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNI--SALKENNSLFKDAQRAMHTFRDTSEKIN 387
T T++ T + D + ++ IN++ + + ++ + + DT +
Sbjct: 210 HTRVTVDTATDAIRDLDHRMDGTLASINHLADTGTAQLDARGDELHTLLVNSNDTVTEAR 269
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + + + S + ++I + +R L + ERNPQ ++ GR
Sbjct: 270 GALAGLHD-ITAPSSADRSNIDSSLRDLAAAAAALRGFATDVERNPQLLLMGR 321
>gi|58038514|ref|YP_190478.1| putative toluene tolerance protein [Gluconobacter oxydans 621H]
gi|58000928|gb|AAW59822.1| Putative toluene tolerance protein [Gluconobacter oxydans 621H]
Length = 154
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 42/128 (32%), Gaps = 5/128 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAE---VIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G + S L + + + + GP + + S +GL T ++V G+PVGR
Sbjct: 10 GAILASGLVLAIAGTFLVYGNALRKGPDFQGEILHAAF-NSANGLHTGANVDLAGVPVGR 68
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+V + LD + + L T I + +++ +
Sbjct: 69 VVSITLDP-RTQMADVAFTVDQRLHLPVDTAVGIGAPTMTADNALQIQPGHSHTTLSGEG 127
Query: 128 ATERNQRA 135
+
Sbjct: 128 KITDTRDQ 135
>gi|317125887|ref|YP_004099999.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
gi|315589975|gb|ADU49272.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
Length = 426
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 5/132 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + F++ L ++ +++ G V + S G+ + V
Sbjct: 1 MITRGVRVRLAAFLLLSLGLVSVLSASYVGLTDKVLGGSYVVSADLADS-GGIFVGAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VG + GL L+ + L A + T + T A + + G Y++L R
Sbjct: 60 YRGVTVGSVEGLRLNGDG---VLVDARLDRGTEVPADTRAVVENRSAVGEQYLDLQPRRD 116
Query: 120 EKKTIFQIATER 131
+
Sbjct: 117 GGPFLAAGDVIP 128
>gi|312137902|ref|YP_004005238.1| mce family protein mce1f [Rhodococcus equi 103S]
gi|311887241|emb|CBH46550.1| putative Mce family protein Mce1F [Rhodococcus equi 103S]
Length = 403
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 18/127 (14%), Positives = 48/127 (37%), Gaps = 3/127 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ + LF ++ F I +++ + P + + + GL+ +SV + G
Sbjct: 2 RRVVLVQLVLFAITAAVVVPFGIAYVAGPGAFRDP-IRLHANMS-NALGLTAATSVTYRG 59
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG++ + L + + + + T + + A + +AGI +++
Sbjct: 60 VQVGKVASVVLVPDRGG-ARIEFDLDAGTRIPRDSIAKVGMGTVAGIQSVDIFPNTDTGP 118
Query: 123 TIFQIAT 129
+
Sbjct: 119 FLADGDE 125
>gi|293606224|ref|ZP_06688587.1| paraquat-inducible protein B [Achromobacter piechaudii ATCC 43553]
gi|292815371|gb|EFF74489.1| paraquat-inducible protein B [Achromobacter piechaudii ATCC 43553]
Length = 554
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 53/399 (13%), Positives = 124/399 (31%), Gaps = 32/399 (8%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L S V F I VGR++G LD+ + D P T T+
Sbjct: 181 DLGSLDIGSPVYFRRINVGRVIGYELDKTGTA---VNVEVFVDAP--NDKFVTNATRFWN 235
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
K + + + S + + + + +
Sbjct: 236 ASGVDFSVNADGLKVRTQSLVSMAVGGVAFESVQSVRDGSAPAPADAKFDLYPTEAAAKA 295
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ P+ V A + + TQ+ + F ++ D
Sbjct: 296 NPDGEAFPIRMRFDQSIRGLAVGAPIDFSGITLGNVTQINLDFDPATKRFYSLVDATLYP 355
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
++ L +V + + + + + + +R +T + ++ +L +
Sbjct: 356 ER------LGRVYEEVRERALKDGDVAGVRLLGVMIKYGLRAQLRTSNLLTGQLYVVLDN 409
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
F + + T + I N+ + I + +KI + I +L +
Sbjct: 410 FPNAKPVEFTPSDPAVIPTIPGNLDQLQQQVSNIVAKIEKI-----PFDKIGEDLRTTLA 464
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
++LM++++ + +AQ + R++ IN + S + N
Sbjct: 465 STSKLMNRLDK--------QVTPEAQSMLKQARESMANINSMLASDASLPVN-------- 508
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ +++L + + NP+ ++ GR K +
Sbjct: 509 TEKAMQELSRAARSLRALADFLQSNPEALLRGRGKDPIP 547
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/247 (11%), Positives = 65/247 (26%), Gaps = 7/247 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DG + +R S+ GL+ + + F+GI +G + + LD + + D LY
Sbjct: 298 DGEAFPIRMRFDQSIRGLAVGAPIDFSGITLGNVTQINLDFDPATK---RFYSLVDATLY 354
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
P + + + L + + + RA + + +N
Sbjct: 355 PERLGRVYEE----VRERALKDGDVAGVRLLGVMIKYGLRAQLRTSNLLTGQLYVVLDNF 410
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + I +S
Sbjct: 411 PNAKPVEFTPSDPAVIPTIPGNLDQLQQQVSNIVAKIEKIPFDKIGEDLRTTLASTSKLM 470
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
N + + +N +L + N K+ ++ +R
Sbjct: 471 NRLDKQVTPEAQSMLKQARESMANINSMLASDASLPVNTEKAMQELSRAARSLRALADFL 530
Query: 275 QEVGQKI 281
Q + +
Sbjct: 531 QSNPEAL 537
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 8/82 (9%), Positives = 28/82 (34%), Gaps = 9/82 (10%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+S+ + + V +++ S W+ + +GL + +R+
Sbjct: 23 KSRISWIWLVPIVAALMGMSLVIRTWMQAGPDISIS--------FNTAEGLEVGKTQLRY 74
Query: 61 NGIPVGRIVGLFLDQEYPNHSL 82
+ +G + + + + +
Sbjct: 75 KDVNIGTVKSIGFNSDRSKVVV 96
>gi|306789089|ref|ZP_07427411.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu004]
gi|308334299|gb|EFP23150.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu004]
Length = 418
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/339 (9%), Positives = 86/339 (25%), Gaps = 11/339 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V++ + R+ ++ + +G+ V G+PVG+IV +
Sbjct: 6 VLATALVLVAGVILAMRTADAAARTT--VVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEP 63
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + A I + L I+L+ T+ +
Sbjct: 64 QP---LRAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQE 120
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKPLTTTIANIETIST 188
R ++ + + + +N+ T I +S
Sbjct: 121 RTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTIIKLSQ 180
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H + T + + + + + + ++ ++I + +
Sbjct: 181 AISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIGQAAED 240
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADS 307
+ + + + + D L + S NI +
Sbjct: 241 LNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEP 300
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + A + + + I +
Sbjct: 301 ANGALTGALAGNNMANPIAFLCGAIQAASRLGGEQAAKL 339
>gi|308379088|ref|ZP_07484971.2| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu010]
gi|308358188|gb|EFP47039.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu010]
Length = 430
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/339 (9%), Positives = 86/339 (25%), Gaps = 11/339 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V++ + R+ ++ + +G+ V G+PVG+IV +
Sbjct: 18 VLATALVLVAGVILAMRTADAAARTT--VVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEP 75
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + A I + L I+L+ T+ +
Sbjct: 76 QP---LRAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQE 132
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKPLTTTIANIETIST 188
R ++ + + + +N+ T I +S
Sbjct: 133 RTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTIIKLSQ 192
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H + T + + + + + + ++ ++I + +
Sbjct: 193 AISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIGQAAED 252
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADS 307
+ + + + + D L + S NI +
Sbjct: 253 LNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEP 312
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + A + + + I +
Sbjct: 313 ANGALTGALAGNNMANPIAFLCGAIQAASRLGGEQAAKL 351
>gi|239501392|ref|ZP_04660702.1| paraquat-inducible protein [Acinetobacter baumannii AB900]
Length = 553
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/396 (9%), Positives = 106/396 (26%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 187 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 225
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 226 IRAPYDKFVTTDTRFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 285
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + + H + + +I +
Sbjct: 286 KSRFNLWDSKAEALKEPDGLPRGVIMYFDHSLRGLSVGAPIDFMGIEIGNVKSINAEFYN 345
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 346 NYKQIRMRVEAVIYPSRVENGQALNPNSNIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 405
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + N+N
Sbjct: 406 PKAKPATLQILSDDRVVIPTTPTELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 465
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ A + D ++ + +
Sbjct: 466 AIESTDKLVKQLDGKVA-PGLQATLDDVRKTVRSSESILSS---------------DAPL 509
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 510 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGK 545
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
VI+ S+ GLS + + F GI +G + + + +
Sbjct: 309 VIMYFDHSLRGLSVGAPIDFMGIEIGNVKSINAEFYNNYKQIRMRVE 355
>gi|224093031|ref|XP_002309784.1| predicted protein [Populus trichocarpa]
gi|222852687|gb|EEE90234.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 4/115 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S+ WL + + G+ T + VR G+ VG +V
Sbjct: 88 VGLFLVSGAVLVALSLAWLRGFQLRSKFRKYLAVIEFAQASGICTGTHVRIRGVTVGEVV 147
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ A + D + ++ + GL T I+++ K
Sbjct: 148 RVNP---SLKSIEAVVEVEDDKIFIPRNSLVEVNQSGLLMETMIDITPRDPIPKP 199
>gi|83594242|ref|YP_427994.1| hypothetical protein Rru_A2910 [Rhodospirillum rubrum ATCC 11170]
gi|83577156|gb|ABC23707.1| Mammalian cell entry related [Rhodospirillum rubrum ATCC 11170]
Length = 317
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 84/283 (29%), Gaps = 7/283 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
S+ VG FV+ +L + L+ + +V G+ + V +
Sbjct: 3 SSRVNSLIVGGFVLILLGGIIAAATILAG----KTGSTDTYFTSYDNVTGIKYGTQVLYE 58
Query: 62 GIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G +G++ + +Q S + ++ + + TI T GL I + E
Sbjct: 59 GYRIGQVDEIIPEQRAEGTSFRLRLAVQKGWRIPEGSQTTIATSGLLSAVAINIRGGTAE 118
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKIIENIEKPLTT 178
+ A + + + + ++ + ++ + ++ L
Sbjct: 119 ASLTPGSEIPGGASGGMFAAINDLASEVGTLSRDGLEPLVAKLNAYVDTLGGSLADNLPA 178
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N S +A ++ I + + A
Sbjct: 179 ILGNARITSEAIARDLPPIIARVDRFTARLDAEVLSQKNIDGLGASIGNISAFSAELNGL 238
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
++ + Q S+ V +++ D+R T + I
Sbjct: 239 GRELRQTGQTLDGMVAGSAPLVDSSLRDLRYTLRALASSIDAI 281
Score = 41.5 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 43/124 (34%), Gaps = 1/124 (0%)
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRA 375
I II+ ++ S + L + I NISA E N L ++ ++
Sbjct: 186 TSEAIARDLPPIIARVDRFTARLDAEVLSQKNIDGLGASIGNISAFSAELNGLGRELRQT 245
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
T + S +L+ ++ + I + ++ + + +NP
Sbjct: 246 GQTLDGMVAGSAPLVDSSLRDLRYTLRALASSIDAITFNMEGASRDMKEFSRSLRQNPGV 305
Query: 436 IVWG 439
++ G
Sbjct: 306 LLRG 309
>gi|323719456|gb|EGB28583.1| MCE-family protein mce3D [Mycobacterium tuberculosis CDC1551A]
Length = 435
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/339 (9%), Positives = 86/339 (25%), Gaps = 11/339 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V++ + R+ ++ + +G+ V G+PVG+IV +
Sbjct: 23 VLATALVLVAGVILAMRTADAAARTT--VVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEP 80
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + A I + L I+L+ T+ +
Sbjct: 81 QP---LRAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQE 137
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKPLTTTIANIETIST 188
R ++ + + + +N+ T I +S
Sbjct: 138 RTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTIIKLSQ 197
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H + T + + + + + + ++ ++I + +
Sbjct: 198 AISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIGQAAED 257
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADS 307
+ + + + + D L + S NI +
Sbjct: 258 LNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEP 317
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + A + + + I +
Sbjct: 318 ANGALTGALAGNNMANPIAFLCGAIQAASRLGGEQAAKL 356
>gi|153819627|ref|ZP_01972294.1| paraquat-inducible protein B [Vibrio cholerae NCTC 8457]
gi|126509831|gb|EAZ72425.1| paraquat-inducible protein B [Vibrio cholerae NCTC 8457]
Length = 387
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/400 (9%), Positives = 92/400 (23%), Gaps = 37/400 (9%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ L+ V + G VGR+ D E +
Sbjct: 7 VLTNKEAGKLNVGDPVMYEGFTVGRVESAQFDVESKKA---------------------Q 45
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
Q Y +L R I + + +
Sbjct: 46 YQLFIFAPYDKLVNTRSFFWLNSGINL-----------QLNAEGLEFSLGSIESLLKGGV 94
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
Q E+ +P+T + V D + + S +
Sbjct: 95 TFGQLQEEDSGQPITQQLTEFRLFDDVKQIREGMFDDYIEFVMMFDESVRGLKPSAPVEY 154
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + K + + I + ++ + + + +
Sbjct: 155 RGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIELGRLYDNFNKADLPALKSRMQQEFFK 214
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTS-NMRSSISAIREITDQRQKIISTINTIENITSN 341
L + + + + ++ + +
Sbjct: 215 GLKASLKTGNLVTGALYIDTDYYPEEKIDGLKHFDGYPLFPTKQGGFAEVQKQVTELLRK 274
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
LN + ++ +N+ E + ++ I + + L F
Sbjct: 275 LNGLP--MDDTLASLNSTLKTSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFG 332
Query: 402 --QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ +++ +R+L + + F L P +++G
Sbjct: 333 PESTVYRELETTLRELNQVMAEFKPVLRTINEKPNALIFG 372
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY------PNHSLAKALIR 88
E ++ SV GL + V + G+ +G + + L N I
Sbjct: 129 FDDYIEFVMMFDESVRGLKPSAPVEYRGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIE 188
>gi|296167384|ref|ZP_06849786.1| mce-family protein mce1c [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295897328|gb|EFG76932.1| mce-family protein mce1c [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 530
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/318 (9%), Positives = 89/318 (27%), Gaps = 6/318 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + G+ VR G+ V
Sbjct: 8 NRVRIGLMGIIVTLLVIGVGQSFTSVPMLMAKPHYY--GQFTDTGGIGVGDKVRIAGVDV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ L ++ + H L K + T + + I+T + G +++ +K
Sbjct: 66 GKVEALNIEGD---HILVKFNLGTAT-IGTESRLAIKTDTILGKKIVDVEARGNQKLRPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + +S + + I+ L+ + +
Sbjct: 122 DSLPIGQSTTPYQIYDAFFDVTRAAQGWNIDTVKESLHVLSQTIDQTYPHLSAALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + + ++ ++ + + Q ++ +L N
Sbjct: 182 FSDTIGKRDEQVKHLLAQANQVASVLGDRSDQVDRLLVNAKNLLVAFNERGQAIDALLSN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ S + N H + + Q + ++ D + + K + +
Sbjct: 242 VAAFSEQVKGLINDNPNLNHVLEQLRQVSDILKERKDDVAVGLTEVGKFLPSLNEAISSG 301
Query: 306 DSTSNMRSSISAIREITD 323
+ +++ + +
Sbjct: 302 PFFKVVLHNLAPYQILQP 319
>gi|118470369|ref|YP_887178.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118171656|gb|ABK72552.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 485
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/346 (11%), Positives = 101/346 (29%), Gaps = 15/346 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T + L + L + + + GP I+ S + VR G+ VG
Sbjct: 12 TRILLVALVALTAAGGGVVL---YQKNFGPKT--IVAHFTSATAIYPGDEVRVAGVKVGN 66
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY-----IELSTLRKEKK 122
I + + ++ D P+ A I Q L Y
Sbjct: 67 IKTIDAAGTT---AKMTLEVQRDVPIPADAKAIIVAQNLVSARYVQLTPPYGVDGADGPV 123
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
++ A+ A + S + + I++ +
Sbjct: 124 MADGAEIGVDRTAVPVEWDEVKEQLTRLATDLGPANGVSETSLGRFIDSTANAMAGNGDK 183
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ T ++ + + T + + T ++ + A ++
Sbjct: 184 LRTTIAQMSEVGRILGEGSGNIVGTLQNLQTFVTALRDSNAQIVQFQGSLADVTSVIDGS 243
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ + + ++ V + R+ T + ++ +LSD S+ +K+
Sbjct: 244 RSDLDAAVKDLSEAVGLVQGFISGTRDQTAEQIQRLAEVTQVLSDNSTVVKN--VLHAAP 301
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
N + N+ + + + + + I + + +++ +
Sbjct: 302 NALVNGYNIYNPDTGGPRGSFAMNNFANPVAVICSAIGAVENATSE 347
>gi|114326854|ref|YP_744011.1| paraquat-inducible protein B [Granulibacter bethesdensis CGDNIH1]
gi|114315028|gb|ABI61088.1| paraquat-inducible protein B [Granulibacter bethesdensis CGDNIH1]
Length = 572
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 51/395 (12%), Positives = 118/395 (29%), Gaps = 7/395 (1%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
V + T + V F PVG ++ L + D ++ + +
Sbjct: 180 VGQIGTGAPVFFRDRPVGEVLSLDVGKPGESGTMTIFIRAPFDKYVHEGSFFWSASGMSV 239
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ + + + + A + TP + S S H Q
Sbjct: 240 STSGGDFRVEIESLQALLSGAVAFDTPNEALETPEATDKTNFFLFRDRDTASSSHYHEQL 299
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
K + + + D + + + L
Sbjct: 300 QFVTYLKGDLSGLDKYAPVLIYGIRVGFVTDVHLGFDSKSNTVIVPVHFVVQPERLKIKG 359
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ K ++ ++ + + E Q + ++ D ++
Sbjct: 360 PPVSKEESEARLAALVRRGLRARLATTSYITGAQAIELVMDENGQD-SVLTREGDAVVLQ 418
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
++ +A + IA + + + I +Q + ++ I E + + L D S+
Sbjct: 419 QATGTDFAGLTASVGAIAAKLNAI--PFAEIGANLNQTLEGVAAIAKGEQLRNTLRDVSK 476
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
A + +N A K L + + + T + N + S+ N S +
Sbjct: 477 TMASVRELADN--ANKGATPLLRRLPQISQDLQATLSRANTLVGSLDNGYGANSHFN-RE 533
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ L+ +L +T + +R+P+ ++ GR K
Sbjct: 534 LDRLMAQLNDTARSIRILADLLDRHPEALILGRAK 568
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 25/73 (34%), Gaps = 7/73 (9%)
Query: 25 IYWLSRSNQYDGPMAE----VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+ + + + G + GL + V GI VG + + L + ++
Sbjct: 281 FFLFRDRDTASSSHYHEQLQFVTYLKGDLSGLDKYAPVLIYGIRVGFVTDVHLGFDSKSN 340
Query: 81 ---SLAKALIRPD 90
+++P+
Sbjct: 341 TVIVPVHFVVQPE 353
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 39/465 (8%), Positives = 111/465 (23%), Gaps = 48/465 (10%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ + W+ + + +GL + VR + +G + + L
Sbjct: 36 ILAAICVIWIG-YRTISQEGPTITLTFQT-GEGLVAGQTKVRHKAVDLGTVQSINLS-ND 92
Query: 78 PNHSLAKALIRPDTP--LYPSTTATI-----------RTQGLAGITYIELSTLRKEKKTI 124
+H + +R + L + + + +IEL R
Sbjct: 93 MSHVVVTIAMRQEAENVLTDHARFWVVRPRLSAGDISGLETIVSGAFIELDPGRPGGNYR 152
Query: 125 F-------QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ A ++ + I + + + + T
Sbjct: 153 YQFTGLEAPPAVRSDEPGKTFTLKAFRVGQIGTGAPVFFRDRPVGEVLSLDVGKPGESGT 212
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
TI + + + +
Sbjct: 213 MTIFIRAPFDKYVHEGSFFWSASGMSVSTSGGDFRVEIESLQALLSGAVAFDTPNEALET 272
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS-------- 289
N + + SS + V + + L+
Sbjct: 273 PEATDKTNFFLFRDRDTASSSHYHEQLQFVTYLKGDLSGLDKYAPVLIYGIRVGFVTDVH 332
Query: 290 ---SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + ++ + E + ++ T++ +
Sbjct: 333 LGFDSKSNTVIVPVHFVVQPERLKIKGPPVSKEESEARLAALVRRGLRARLATTSYITGA 392
Query: 347 QKFAELMSK--INNISALKENNSLFKDAQRA-----MHTFRDTSEKINRY-IPSIGNNLQ 398
Q +M + +++ + + + + A + + K+N IG NL
Sbjct: 393 QAIELVMDENGQDSVLTREGDAVVLQQATGTDFAGLTASVGAIAAKLNAIPFAEIGANLN 452
Query: 399 NFSQSGL-----NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ ++N +R + +T+ + +N + ++
Sbjct: 453 QTLEGVAAIAKGEQLRNTLRDVSKTMASVRELADNANKGATPLLR 497
>gi|94987487|ref|YP_595420.1| paraquat-inducible protein B [Lawsonia intracellularis
PHE/MN1-00]
gi|94731736|emb|CAJ55099.1| Paraquat-inducible protein B [Lawsonia intracellularis
PHE/MN1-00]
Length = 319
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 4/95 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T +G FV + +I + ++ A ++ S+ GLS S V F
Sbjct: 1 MSHQVSKTLIGAFVAGSILLLIIAIIFFGSVKLFNS-TATFVMFFDKSISGLSPGSPVVF 59
Query: 61 NGIPVGRIVGLFLDQ---EYPNHSLAKALIRPDTP 92
G+PVGR++ + +D+ + + +T
Sbjct: 60 MGVPVGRVIDIKVDKISNDIGFTIPVYVELYENTH 94
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 32/245 (13%), Positives = 76/245 (31%), Gaps = 14/245 (5%)
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ ++ T + + +L + NF+
Sbjct: 84 PVYVELYENTHTIFIKHNLPQEEEEETEYLNNLIKQGLRASLAQQSLLTGQLMIELNFIT 143
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
Q+ T + T V K+D++L + +S K + L +N +
Sbjct: 144 PESQMDTTHVVFYKGTPVIPTVPSKLDNILKELTSLPLDKISGNIL-----EITNSLKIL 198
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
E + ++ + ++ + N S + K + L +
Sbjct: 199 LNTPETPNIIPQLSNFLHQGLAAVAEFNQSLIDIRKASKKYGTMV-----EGLNTELSLT 253
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ + + IN + N + L DI ++++++ + N ERNP+
Sbjct: 254 LKEATKSFQTINNTTERLLGN----NSPTLLDIHHMLQEVSKAAKAIRILANMLERNPEV 309
Query: 436 IVWGR 440
++ G+
Sbjct: 310 LIRGK 314
>gi|296163929|ref|ZP_06846565.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900710|gb|EFG80080.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 347
Score = 71.1 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/296 (14%), Positives = 81/296 (27%), Gaps = 11/296 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K T+V + + I + + + GL VR
Sbjct: 1 MK-KITATAVKFSTAVLTLIAVTVIIVVVFAQLRFNKTSSYTAEFST-ASGLRAGQFVRA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLR 118
+G+ +G++ + + E + + PLY STTA+IR L G Y+E
Sbjct: 59 SGVEIGKVSSVRIT-EGGHRVRVDFEVDRSVPLYQSTTASIRYADLLGQRYVELKRGDGE 117
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENI 172
+ + R + + + + Q I
Sbjct: 118 GMDRVLPPGGFIPLSRTEPALDLDALIGGFKPVFRALDPDKVNTIATAIVTVFQGQGGTI 177
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L T I+ I + + T + D + +
Sbjct: 178 NDILDQTAQLTAQIAGRDQAIGEVISNLNVVLETTVKHRKEFDQTIDNVDKLITGLSNQA 237
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
V I ++ + + V V+ T Q + +D +L D
Sbjct: 238 DPLAANVAHIGNVAGTLADLLSDNRPLLQKAVGYVQNTLQPLIDRLDYVDGVLRDA 293
>gi|284034020|ref|YP_003383951.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
gi|283813313|gb|ADB35152.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
Length = 337
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 92/289 (31%), Gaps = 9/289 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
++G+ ++++ + + G + + GL + +R G+ V
Sbjct: 8 NQLTIGVVGLTVIGLIMLAAFKAQDLPLIGG-GTKYSAQFSE-AGGLKKNDEIRVAGVRV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ + L+ H ++ L T A ++ + L G Y++L+ +
Sbjct: 66 GQVRAVELEG---THVRVDFVVDRGVKLGERTGAEMKIKTLLGQKYLKLTPAGGGELKEG 122
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + +++ + + +N + ++ +
Sbjct: 123 AQIPLERTVSAYDVVDAFTDLATTTERIDTAQLARALDTLSTTFKNTPDEVKASLTGLSR 182
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+S +A + K++ + +N + ++Q+L +
Sbjct: 183 LSRNVAKRDEELKKLLQHSDTVTKILADRNQQLITLMKDGNTVLQAVQARRALIHQLLVS 242
Query: 246 IQVSSNN----FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
Q S ++ + T+ V + + +D + +
Sbjct: 243 TQKLSAQVTALVRENRKDLAPTLQKVNAVLAILLQNQKSLDASIRGLAP 291
>gi|312141005|ref|YP_004008341.1| mce family protein mce4d [Rhodococcus equi 103S]
gi|311890344|emb|CBH49662.1| putative Mce family protein Mce4D [Rhodococcus equi 103S]
Length = 415
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 74/263 (28%), Gaps = 5/263 (1%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ SV G+ S VR G+ VG + + + + +
Sbjct: 36 GTTKITAYFDKSV-GIYEGSDVRVLGVKVGTVDSVEPQGD---QVQVTMTVDRGVDIPAD 91
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS- 155
A T + YI+L+ + + + AT +R + ++
Sbjct: 92 AKAAQVTPSVVSDRYIQLTPVYTGGEKMANDATIPRERTATPVEVDQLYASVTELSEALG 151
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
++ + +++ L + T L+ + T +
Sbjct: 152 PNGANKDGALSNLVDTAAANLDGNGDALGNTFTQLSAAARTLSDSRADIFDTVKNLQVFV 211
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ D A + EN+ ++ N + V V D RE Q
Sbjct: 212 SALAANDAQVRQFNTQLADFSGYLAGEKENLGLALNQLSLALGDVARFVEDNRELLQGNI 271
Query: 276 EVGQKIDHLLSDFSSKMKSKETS 298
E + ++D + +
Sbjct: 272 EGLTTVTQTVADQRDSLAEALVT 294
>gi|294788985|ref|ZP_06754225.1| paraquat-inducible protein B [Simonsiella muelleri ATCC 29453]
gi|294483087|gb|EFG30774.1| paraquat-inducible protein B [Simonsiella muelleri ATCC 29453]
Length = 582
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/409 (9%), Positives = 105/409 (25%), Gaps = 34/409 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-----------EYPNHSLAK----ALIRPDTPLYPS 96
LS S V F VG + D + PN SL + +
Sbjct: 174 LSVGSPVLFENHTVGTVESAKFDPKTQMVNYSIFIQSPNESLITSASLFWLDSGVSIRTD 233
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
+ + K Q + I + S
Sbjct: 234 GSGISVNAPPLPALLSGAISFFTPKFIDNQTPVTNGDQFKIYNDRRELESQPSPRTLYYV 293
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ S +I IE + ++ + + ++ +
Sbjct: 294 AFFNQSVRGLEIGAPIEYKGIKIGTVADVPYFDGSDGFNLLKNGKIPVRLRLEPYLLETN 353
Query: 217 FNTITDLITSLDKMIKAIDLQK-------VNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ L + N ++ ++ + KS ++ V++
Sbjct: 354 NRRELHQSKEYWENEIQAALNRGLTASIVSNNMILGSKMIELSDEKSDLPILKPVNEYHG 413
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
T G ++ L + ++ + I +++ + ++
Sbjct: 414 HTVIASRSGSSLEDLQAQVGKLLEKFNALPLEKTIGSLNADLAELKNTLKSAQTMLASTQ 473
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
T+ + + + + M+ +N + + + + + R+T + ++
Sbjct: 474 QTMQNVNQAVITGDKTLKSANNAMNSVNKLINNPSIQQMPTELNQTLRDLRETLKGVSPQ 533
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++Q ++ + T+ + + P +++
Sbjct: 534 ------------SPVYQEVQTTLQSIDRTLKDVKPVIKTLKEKPNSLIF 570
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/295 (9%), Positives = 84/295 (28%), Gaps = 9/295 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALIRP 89
+ SV GL + + + GI +G + + + D + + P
Sbjct: 288 RTLYYVAFFNQSVRGLEIGAPIEYKGIKIGTVADVPYFDGSDGFNLLKNGKIPVRLRLEP 347
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
L + + I+ + R +I + + + +
Sbjct: 348 -YLLETNNRRELHQSKEYWENEIQAALNRGLTASIVSNNMILGSKMIELSDEKSDLPILK 406
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+SR + + ++ + + + + D +
Sbjct: 407 PVNEYHGHTVIASRSGSSLED-LQAQVGKLLEKFNALPLEKTIGSLNADLAELKNTLKSA 465
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ +T T+ ++ ++ K + N +++ + + ++ T+ D+RE
Sbjct: 466 QTMLASTQQTMQNVNQAVITGDKTLKSANNAMNSVNKLINNPSIQQMPTELNQTLRDLRE 525
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
T + + + S ++ + + N I++ +
Sbjct: 526 TLKGVSPQSPVYQEVQTTLQSIDRTLKDVKPVIKTLKEKPNSLIFNHNIQDPNPK 580
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 51/478 (10%), Positives = 135/478 (28%), Gaps = 59/478 (12%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS-SVRF 60
+ + + + + + I+ L ++ + GP +++ + +G+ ++ +VR
Sbjct: 12 KVRQTNALISTVWIIPVLAAIIGIWLLIQNYREKGPEITLLL---DNAEGIEVNTTAVRI 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI-----------RTQGLAG 108
+ VGRI + L Q+ +L A+ + + T I L
Sbjct: 69 LSVDVGRITKVRLRQDQKGVALTARLNKDVEDLMREDTQFWIVKPRIDQNGITGLNTLVS 128
Query: 109 ITYIELSTLRKEKKTIFQ-----IATERNQRAMITATPSGINYFISNAE----------- 152
+YI S + E + + I SG N + +
Sbjct: 129 GSYIAFSPGKSEVEKSTFEVSDLPPVTAIGQNGIRVYLSGKNTKMLSVGSPVLFENHTVG 188
Query: 153 -----------NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ +I + + +I T + ++ N + ++
Sbjct: 189 TVESAKFDPKTQMVNYSIFIQSPNESLITSASLFWLDSGVSIRTDGSGISVNAPPLPALL 248
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
N + + ++ Q + L + + +
Sbjct: 249 SGAISFFTPKFIDNQTPVTNGDQFKIYNDRRELESQPSPRTLYYVAFFNQSVRGLEIGAP 308
Query: 262 NTVHDVRETT---QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
++ T + + + L + E N +
Sbjct: 309 IEYKGIKIGTVADVPYFDGSDGFNLLKNGKIPVRLRLEPYLLETNNRRELHQSKEYWENE 368
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAEL----------MSKINNISALKENNSL 368
+ R S ++ + S + + S + ++L + + L
Sbjct: 369 IQAALNRGLTASIVSNNMILGSKMIELSDEKSDLPILKPVNEYHGHTVIASRSGSSLEDL 428
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
+ + F + + I S+ +L ++ L Q ++ Q+T+ + + +
Sbjct: 429 QAQVGKLLEKFNAL--PLEKTIGSLNADLAEL-KNTLKSAQTMLASTQQTMQNVNQAV 483
>gi|291298695|ref|YP_003509973.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
gi|290567915|gb|ADD40880.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
Length = 346
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 82/294 (27%), Gaps = 7/294 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
G + I + + + + GL+ + VR G+ V
Sbjct: 28 NVKRTGAITLVIAIMAVLGAFQMDDLVLLASGSSY--TAQLRDAAGLTPGTEVRVAGVKV 85
Query: 66 GRIVGLFLDQEYPNH--SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
G+I + L I D + T A++R + + G Y+ + +
Sbjct: 86 GKITSVDLAGLGTQKPHVDVDFRIDGDVTMGDRTAASVRLKTVLGQRYLAIEPKGDGELK 145
Query: 124 IFQIATERNQRA---MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I T R + + + + S + +++ L
Sbjct: 146 NDTIPTSRTATPLDVVDAVNNLADTVGEIDTDQLGTALEVLSDTFADTNDEVDESLKGIS 205
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+TIS+ ++ T+V + + + + K K +
Sbjct: 206 ELSKTISSRNEELGDLLESARSVTKVLAERDEEFKKLVSDGNKLLGEVKNRKEAIHDLLA 265
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + + + + ++ + ++ L++ +K+
Sbjct: 266 STVTLSEELQGLVDDQEKDLAPALTKLDGVVDLLKDNQENLEKTLTNMGPFLKA 319
>gi|153827985|ref|ZP_01980652.1| paraquat-inducible protein B [Vibrio cholerae 623-39]
gi|229523836|ref|ZP_04413241.1| paraquat-inducible protein B [Vibrio cholerae bv. albensis VL426]
gi|148876566|gb|EDL74701.1| paraquat-inducible protein B [Vibrio cholerae 623-39]
gi|229337417|gb|EEO02434.1| paraquat-inducible protein B [Vibrio cholerae bv. albensis VL426]
Length = 542
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/392 (8%), Positives = 104/392 (26%), Gaps = 33/392 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLA 107
LS V + G VGR+ D E D + + + +
Sbjct: 168 AGKLSVGDPVMYEGFTVGRVESTQFDVESKKAQYQLFIFAPYDKLVNTRSFFWLNSGINL 227
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ L +++ + + + + +
Sbjct: 228 QLNAEGLEFSLGSIESLLKGGVTFG-----------------QLQEDDSGQQITQQMTEF 270
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ + K + + ++ + K + + + T+
Sbjct: 271 LLFDDVKQIREGMYGDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVY 330
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + L ++ + + ++ + + + + L D
Sbjct: 331 INIKRIPVLVRIELGRLYDNFGTTDLPNLKKRMQDEFAKGLKASLKTGNLVT--GALYID 388
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + +++ + + ++ + + + S LN + +
Sbjct: 389 TDYFPDEPADPLTQFDGYPMFPTKQGGFAEVQKQVTELLRKLNGLPMDDTLAS-LNSTLK 447
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
L++ I +E +L D Q ++ T + +
Sbjct: 448 TSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFGPE------------STVYRE 495
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ +R+L + + F L P +++G
Sbjct: 496 LETTLRELNQVMAEFKPVLRTINEKPNALIFG 527
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH--------SLAKALI 87
G E ++ SV GL + V + G+ +G + + L E N L + +
Sbjct: 285 GDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVYINIKRIPVLVRIEL 344
>gi|145347473|ref|XP_001418189.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578418|gb|ABO96482.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 306
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/288 (12%), Positives = 91/288 (31%), Gaps = 5/288 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+++ + SF W+ + + G+ ++VR G+ G ++
Sbjct: 21 VGLFMITGVALSFVIWGWIQGLLSFARKNSYQAFIEFPVACGIQVGTNVRIRGVKAGSVL 80
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI-- 127
+ E L + + P+ ++ GL T I+++ +
Sbjct: 81 SVQPSLE-KVEVLVEMD-DKNVPIPRNSLIEANQSGLIAETIIDITPAIPIPVAQWGPLD 138
Query: 128 -ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
E + +S E + ++ N T T + T
Sbjct: 139 SGCEGEGVIVCDRGKIKGLPGVSMDELVGICTKLAREMERQDGMNKMFDTTDTARRLMTT 198
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
L + I + + + + +T ++ ++ + I+ + + + + +
Sbjct: 199 LQPLLREAAQIAQELRPMMQGVNEQGTLDTLESLAGQTSATVEDIRKLKDAILTEENQEL 258
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
S + + + Q + V + + HL+ S + +
Sbjct: 259 LRQSISTLTKTLQHVEKVSGDISSVSGDPSTRANLRHLIQSLSRLVDA 306
>gi|184158724|ref|YP_001847063.1| paraquat-inducible protein B [Acinetobacter baumannii ACICU]
gi|294843017|ref|ZP_06787700.1| paraquat-inducible protein [Acinetobacter sp. 6014059]
gi|183210318|gb|ACC57716.1| Paraquat-inducible protein B [Acinetobacter baumannii ACICU]
gi|193077762|gb|ABO12631.2| paraquat-inducible protein [Acinetobacter baumannii ATCC 17978]
Length = 553
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/396 (9%), Positives = 107/396 (27%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 187 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 225
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 226 IRAPYDKFVTTDTRFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 285
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + + H + + + +I +
Sbjct: 286 KSRFNLWDSKAEALKEPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYN 345
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 346 NYKQIRMRVEAVIYPSRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 405
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + N+N
Sbjct: 406 PKAKPATLQILNDGRVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 465
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ + Q + R T + S
Sbjct: 466 AIESTDKLVKQLDG--------KVAPGLQATLDDVRKTVRSSESILSSDAP--------L 509
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 510 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGK 545
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
VI+ S+ GL+ + + F GI +G I + + +
Sbjct: 309 VIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVE 355
>gi|153802177|ref|ZP_01956763.1| paraquat-inducible protein B [Vibrio cholerae MZO-3]
gi|153826253|ref|ZP_01978920.1| paraquat-inducible protein B [Vibrio cholerae MZO-2]
gi|124122312|gb|EAY41055.1| paraquat-inducible protein B [Vibrio cholerae MZO-3]
gi|149740018|gb|EDM54193.1| paraquat-inducible protein B [Vibrio cholerae MZO-2]
Length = 542
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/392 (8%), Positives = 104/392 (26%), Gaps = 33/392 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLA 107
LS V + G VGR+ D E D + + + +
Sbjct: 168 AGKLSVGDPVMYEGFTVGRVESTQFDVESKKAQYQLFIFAPYDKLVNTRSFFWLNSGINL 227
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ L +++ + + + + +
Sbjct: 228 QLNAEGLEFSLGSIESLLKGGVTFG-----------------QLQEDDSGQQITQQMTEF 270
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ + K + + ++ + K + + + T+
Sbjct: 271 LLFDDVKQIREGMYGDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVY 330
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + L ++ + + ++ + + + + L D
Sbjct: 331 INIKRIPVLVRIELGRLYDNFGTTDLPNLKKRMQDEFAKGLKASLKTGNLVT--GALYID 388
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + +++ + + ++ + + + S LN + +
Sbjct: 389 TDYFPDEPADPLTQFDGYPMFPTKQGGFAEVQKQVTELLRKLNGLPMDDTLAS-LNSTLK 447
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
L++ I +E +L D Q ++ T + +
Sbjct: 448 TSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFGPE------------STVYRE 495
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ +R+L + + F L P +++G
Sbjct: 496 LETTLRELNQVMAEFKPVLRTINEKPNALIFG 527
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH--------SLAKALI 87
G E ++ SV GL + V + G+ +G + + L E N L + +
Sbjct: 285 GDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVYINIKRIPVLVRIEL 344
>gi|294838769|ref|ZP_06783452.1| Paraquat-inducible protein B [Acinetobacter sp. 6013113]
gi|294857248|ref|ZP_06795017.1| Paraquat-inducible protein B [Acinetobacter sp. 6013150]
gi|301344822|ref|ZP_07225563.1| Paraquat-inducible protein B [Acinetobacter baumannii AB056]
gi|301510473|ref|ZP_07235710.1| Paraquat-inducible protein B [Acinetobacter baumannii AB058]
gi|301596618|ref|ZP_07241626.1| Paraquat-inducible protein B [Acinetobacter baumannii AB059]
Length = 553
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/396 (9%), Positives = 108/396 (27%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 187 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 225
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 226 IRAPYDKFVTTDTRFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 285
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + + + H + + + +I +
Sbjct: 286 KSRFNLWESKAEALKEPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYN 345
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 346 NYKQIRMRVEAVIYPSRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 405
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + N+N
Sbjct: 406 PKAKPATLQILNDGRVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 465
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ A + D ++ + +
Sbjct: 466 AIESTDKLVKQLDGKVA-PGLQATLDDVRKTVRSSESILSS---------------DAPL 509
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 510 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGK 545
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
VI+ S+ GL+ + + F GI +G I + + +
Sbjct: 309 VIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVE 355
>gi|146302311|ref|YP_001196902.1| hypothetical protein Fjoh_4584 [Flavobacterium johnsoniae UW101]
gi|146156729|gb|ABQ07583.1| Mammalian cell entry related domain protein [Flavobacterium
johnsoniae UW101]
Length = 321
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/351 (8%), Positives = 104/351 (29%), Gaps = 33/351 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ V++ + + +L + + ++ +V+ LS + V NG+
Sbjct: 4 TREIKTAILVIASILLFIWGYSFLKGKDLFTN--YTILYAEYDNVEDLSLSAPVTLNGLA 61
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+G++ + +D E L + ++ D P+ ++TA I + L I++ +K
Sbjct: 62 IGKVNKITID-EVTGKLLVELQLKTDFPISKTSTAVIYSPSLIAGKQIKIVPNFTDKNLA 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + E++ + ++
Sbjct: 121 EDGEKLASTVEL------------------------------GLTESLGGKIEPIQQKLD 150
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + ++ ++ + T+ + + +D K
Sbjct: 151 KMLVNIDVLVTGLNNTLDKNTQENLKKTIAELSQTMAQFHKASGSLNNILDTNKGQINGM 210
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + + D+ +T + + K+D L+++ +S + + +
Sbjct: 211 VSNFNKVSNNFNKISDSLNKADLGKTVRNLNQTLAKVDGLMANLNSGKGTAGKLLNDDAL 270
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
++ + + + + ++ ++ K
Sbjct: 271 YNNLAKTSKELELLLQDVRLYPTRYVNVSLFGKKNKPYVAPTENTNSTDKK 321
>gi|229515137|ref|ZP_04404597.1| paraquat-inducible protein B [Vibrio cholerae TMA 21]
gi|254285307|ref|ZP_04960272.1| paraquat-inducible protein B [Vibrio cholerae AM-19226]
gi|150424579|gb|EDN16515.1| paraquat-inducible protein B [Vibrio cholerae AM-19226]
gi|229347842|gb|EEO12801.1| paraquat-inducible protein B [Vibrio cholerae TMA 21]
Length = 542
Score = 71.1 bits (171), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/392 (8%), Positives = 104/392 (26%), Gaps = 33/392 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLA 107
LS V + G VGR+ D E D + + + +
Sbjct: 168 AGKLSVGDPVMYEGFTVGRVESTQFDVESKKAQYQLFIFAPYDKLVNTRSFFWLNSGINL 227
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ L +++ + + + + +
Sbjct: 228 QLNAEGLEFSLGSIESLLKGGVTFG-----------------QLQEDDSGQQITQQMTEF 270
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ + K + + ++ + K + + + T+
Sbjct: 271 LLFDDVKQIREGMYGDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNIY 330
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + L ++ + + ++ + + + + L D
Sbjct: 331 INIKRIPVLVRIELGRLYDNFGTTDLPNLKKRMQDEFAKGLKASLKTGNLVT--GALYID 388
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + +++ + + ++ + + + S LN + +
Sbjct: 389 TDYFPDEPADPLTQFDGYPMFPTKQGGFAEVQKQVTELLRKLNGLPMDDTLAS-LNSTLK 447
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
L++ I +E +L D Q ++ T + +
Sbjct: 448 TSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFGPE------------STVYRE 495
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ +R+L + + F L P +++G
Sbjct: 496 LETTLRELNQVMAEFKPVLRTINEKPNALIFG 527
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 21/59 (35%), Gaps = 6/59 (10%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN------HSLAKALIR 88
G E ++ SV GL + V + G+ +G + + L E N I
Sbjct: 285 GDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNIYINIKRIPVLVRIE 343
>gi|169795459|ref|YP_001713252.1| paraquat-inducible protein [Acinetobacter baumannii AYE]
gi|169148386|emb|CAM86251.1| paraquat-inducible protein [Acinetobacter baumannii AYE]
Length = 566
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/396 (9%), Positives = 108/396 (27%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 200 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 238
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 239 IRAPYDKFVTTDTRFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 298
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + + + H + + + +I +
Sbjct: 299 KSRFNLWESKAEALKEPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYN 358
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 359 NYKQIRMRVEAVIYPSRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 418
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + N+N
Sbjct: 419 PKAKPATLQILNDGRVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 478
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ + Q + R T + S
Sbjct: 479 AIESTDKLVKQLDG--------KVAPGLQATLDDVRKTVRSSESILSSDAP--------L 522
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 523 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGK 558
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
VI+ S+ GL+ + + F GI +G I + + +
Sbjct: 322 VIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVE 368
>gi|169633869|ref|YP_001707605.1| paraquat-inducible protein [Acinetobacter baumannii SDF]
gi|169152661|emb|CAP01660.1| paraquat-inducible protein [Acinetobacter baumannii]
gi|322507465|gb|ADX02919.1| pqiB [Acinetobacter baumannii 1656-2]
Length = 566
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/396 (9%), Positives = 107/396 (27%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 200 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 238
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 239 IRAPYDKFVTTDTRFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 298
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + + H + + + +I +
Sbjct: 299 KSRFNLWDSKAEALKEPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYN 358
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 359 NYKQIRMRVEAVIYPSRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 418
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + N+N
Sbjct: 419 PKAKPATLQILNDGRVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 478
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ + Q + R T + S
Sbjct: 479 AIESTDKLVKQLDG--------KVAPGLQATLDDVRKTVRSSESILSSDAP--------L 522
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 523 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGK 558
Score = 44.2 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
VI+ S+ GL+ + + F GI +G I + + +
Sbjct: 322 VIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVE 368
>gi|229520655|ref|ZP_04410078.1| paraquat-inducible protein B [Vibrio cholerae TM 11079-80]
gi|229342210|gb|EEO07205.1| paraquat-inducible protein B [Vibrio cholerae TM 11079-80]
Length = 542
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/392 (8%), Positives = 104/392 (26%), Gaps = 33/392 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLA 107
LS V + G VGR+ D E D + + + +
Sbjct: 168 AGKLSVGDPVMYEGFTVGRVESTQFDVESKKAQYQLFIFAPYDKLVNTRSFFWLNSGINL 227
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ L +++ + + + + +
Sbjct: 228 QLNAEGLEFSLGSIESLLKGGVTFG-----------------QLQEDDSGQQITQQMTEF 270
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ + K + + ++ + + + + + T+
Sbjct: 271 LLFDDVKQIREGMYGDYIEFVMMFDESVRGLRPLAPVEYRGLRIGTVTKIPLKTESTNVY 330
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + L ++ + + ++ + + + + L D
Sbjct: 331 INIKRIPVLVRIELGRLYDNFGTTDLPNLKKRMQDEFAKGLKASLKTGNLVT--GALYID 388
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + +++ + + ++ + + + S LN + +
Sbjct: 389 TDYFPDEPTDPLTQFDGYPMFPTKQGGFAEVQKQVTELLRKLNGLPMDDTLAS-LNSTLK 447
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
L++ I +E +L D Q ++ T + +
Sbjct: 448 TSEALLASAERILKKQETQNLPADIQASLKQLETTIGGFGPE------------STVYRE 495
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ +R+L + + F L P +++G
Sbjct: 496 LETTLRELNQVMAEFKPVLRTINEKPNALIFG 527
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH--------SLAKALI 87
G E ++ SV GL + V + G+ +G + + L E N L + +
Sbjct: 285 GDYIEFVMMFDESVRGLRPLAPVEYRGLRIGTVTKIPLKTESTNVYINIKRIPVLVRIEL 344
>gi|213158601|ref|YP_002319899.1| paraquat-inducible protein B [Acinetobacter baumannii AB0057]
gi|215482944|ref|YP_002325149.1| Paraquat-inducible protein B [Acinetobacter baumannii AB307-0294]
gi|213057761|gb|ACJ42663.1| paraquat-inducible protein B [Acinetobacter baumannii AB0057]
gi|213988770|gb|ACJ59069.1| Paraquat-inducible protein B [Acinetobacter baumannii AB307-0294]
Length = 555
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/396 (9%), Positives = 108/396 (27%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 189 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 227
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 228 IRAPYDKFVTTDTRFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 287
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + + + H + + + +I +
Sbjct: 288 KSRFNLWESKAEALKEPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYN 347
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 348 NYKQIRMRVEAVIYPSRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 407
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + N+N
Sbjct: 408 PKAKPATLQILNDGRVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 467
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ + Q + R T + S
Sbjct: 468 AIESTDKLVKQLDG--------KVAPGLQATLDDVRKTVRSSESILSSDAP--------L 511
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 512 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGK 547
Score = 44.2 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
VI+ S+ GL+ + + F GI +G I + + +
Sbjct: 311 VIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVE 357
>gi|332043639|gb|EGI79834.1| Mammalian cell entry related domain protein [Lacinutrix algicola
5H-3-7-4]
Length = 312
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 37/115 (32%), Gaps = 4/115 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + V++ + F +L N +G + +GL++ S V G
Sbjct: 2 SREVKTAILVIAGIALFVFGFNYLKGENLLEGDNSFYTTFEY---NGLTSSSPVTIKGNN 58
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
VGRI + D E + + + + GL G I +
Sbjct: 59 VGRISDIKYDFET-GKTRVAFQVDEQLKFSKDSKIRLYELGLMGGNGIAIIPGDS 112
>gi|308804922|ref|XP_003079773.1| ABC-type transport system-like (ISS) [Ostreococcus tauri]
gi|116058230|emb|CAL53419.1| ABC-type transport system-like (ISS) [Ostreococcus tauri]
Length = 449
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/288 (12%), Positives = 93/288 (32%), Gaps = 5/288 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF++S + +F W+ + + G+ ++VR G+ G ++
Sbjct: 164 VGLFIISGVAVTFIIWGWIQGLLSFARKNSYQAFIEFPVACGIQVGTNVRVRGVKAGTVL 223
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ E L + + P+ ++ GL T I+++ +
Sbjct: 224 SVQPSLE-KVDVLVEMD-DKNVPIPRNSVIEANQSGLIAETIIDITPALPIPNAQWGPLD 281
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + G + + + +N + + T + + + T
Sbjct: 282 SGCEGEGLIVCDRGKIKGVQGVSMDELVGICTKLAREMERQNGVQQMFATTESAQRLMTT 341
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
L + ++ H + + + + T +T+ DL ++ I K + + Q
Sbjct: 342 LQPLLREAAQIAHELRPMMQNVNEQGTLDTLEDLAGKTSATVEDIRRLKTTILTDENQEL 401
Query: 250 SNNFVKSSDQVINTVHDVRETTQTF---QEVGQKIDHLLSDFSSKMKS 294
+ + + + V V + + HL+ S + +
Sbjct: 402 LRQSISTLTKTLQHVEKVSGDISSVSGDPSTRTNLRHLIQSLSRLVDA 449
>gi|289523215|ref|ZP_06440069.1| virulence factor Mce family protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503758|gb|EFD24922.1| virulence factor Mce family protein [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 453
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 27/361 (7%), Positives = 95/361 (26%), Gaps = 37/361 (10%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL V L I+ + +++P GL + V +G+
Sbjct: 3 REVKIGLVVFLGLALLAGLIFVSGG-RLVRQRGYILEVQLPE-AKGLPPGAPVYISGVET 60
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + +FL I+ + + ++ GL G +++ + I
Sbjct: 61 GYVEDVFL---TDRGVTVSVFIKEGVNIPSDSKFFVQGGGLLGEASLQIRRGSSDTFIIP 117
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + +++ + +S +
Sbjct: 118 PGPVKGTTTPDVWSVLEEMERNLNSLRSFIDNLSGLIGDEELEDLKRAMK---------- 167
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ ++ + ++D ++ ++
Sbjct: 168 ----------------RIPSFLESAEEASESLKGLSDEGKVFLGDMRGRMGTFLDNANGM 211
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + ++ T+ + + + +++D + E ++N +
Sbjct: 212 VSNINEILAENRQTFKETMANASDLVARLSAMAEELDQ------GGPFAAEVKQLVKNAS 265
Query: 306 DSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKEN 365
D+ + + + + + ++ + + + I I +
Sbjct: 266 DAALAFERFVVELEKTFFSEGGDGDGKGNLPKLLEDVRQTQEAAQSALKAIQKIEVKGDV 325
Query: 366 N 366
+
Sbjct: 326 S 326
>gi|326382588|ref|ZP_08204279.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198707|gb|EGD55890.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 389
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/329 (10%), Positives = 93/329 (28%), Gaps = 8/329 (2%)
Query: 4 KNYYTSVG--LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ +G V+ +L F + + +V + P S GL S V
Sbjct: 9 RKRKIMLGNLALVLVMLAGLAFLAFNSLSWRPWQS-TYQVTVHFPAS-GGLQDTSKVMLR 66
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G +G + + + P +R D + + AG Y+ ++ +
Sbjct: 67 GAEIGDVKNIQV---TPGSVDVTVELRDDYQINKGAKFSALGLSAAGEQYVNITPTSDDG 123
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ Q+ +TA G+ + + +S + I ++ +
Sbjct: 124 PYLQDGDEIAMQQTHVTADFPGMLQSTLDVISQIDAPKLTSTLKELEIALNDRGPNQLKS 183
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + A+ + + Q + + + + + +
Sbjct: 184 IFHSGGVIFADLAKVLPQTTKLIQNSGTILKTTAEIQPDLGTLAGGMDSLFTAAVSADKE 243
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + F + + + + F +V ++ L + + + +
Sbjct: 244 LRTLLGRGPGQFTSLTGSLATITDPLSDVLTQFLDVARQ-GALRAPALATLFPAIRDWSI 302
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIIS 330
E ++++I ++
Sbjct: 303 EAQKMFHDGAWWALASIYPRPSCNYQLAP 331
>gi|108800635|ref|YP_640832.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119869774|ref|YP_939726.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771054|gb|ABG09776.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119695863|gb|ABL92936.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 367
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/343 (11%), Positives = 95/343 (27%), Gaps = 5/343 (1%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+ V ++ R + + G++ + V +G+ VG+
Sbjct: 10 IKAGIIGVVLMILVIMIGLQPIRLLSWATAL-RYQALFTE-AGGIAGGNDVTVSGLKVGQ 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L +L + L TTA IRT L G + L + Q
Sbjct: 68 VSSVELV---NGDALVSFTVDGKYALGSDTTAHIRTGTLLGERVLALESEGSGTLDRDQP 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + T + + AE + ++ S + + ++ I L T + +S
Sbjct: 125 IPTSRTSSPFSLTDAVSELTANTAETDTDSLNRSLDTLSETLDQIAPQLGPTFDGVSRLS 184
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
L N + +++ T ++ L ++ + + +L +
Sbjct: 185 RSLNNRNESLAELLKTAGDVTGIFSERSQQVNSLILNSNDLLAVLNERRYAITSLLRSTA 244
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
S + + + + ++ L+ + +
Sbjct: 245 AVSRELTGVVAENEQELAPTLKHLNEVMAMLERNRDNLAKILPGAAKYYLTQGEIVSNGA 304
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
N ++ + +D+ +
Sbjct: 305 YYNALVPNIQPAQLLQPFLDYAFGFRRGMDAGQPPDDAGPRAE 347
>gi|121603101|ref|YP_980430.1| hypothetical protein Pnap_0184 [Polaromonas naphthalenivorans CJ2]
gi|120592070|gb|ABM35509.1| Mammalian cell entry related domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 310
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 47/103 (45%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ D + ++ GL + VRF G+PVG++ + D + + L + I P
Sbjct: 30 RDDTQRDLYEMSTAETISGLQPQAVVRFRGVPVGKVERIGFDDKVKGNVLIRVSIDRAAP 89
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ ST AT+ +QG+ G+ +I+L + + + + +
Sbjct: 90 MMQSTFATVASQGVTGLGFIQLDDNGESTQRLVPNDDDPPRIP 132
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 17/148 (11%), Positives = 56/148 (37%), Gaps = 12/148 (8%)
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ + + ++ + I + + + S++N ++ ++ + +S
Sbjct: 146 DAIFTQAEQAATRINQLLSRQNEEAINTAVTQLAEAASSINRLAKGLEPTVATLPALSR- 204
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIP----------SIGNNLQNFSQSGLNDIQNLV 412
++++ K + A T+ ++N ++ ++ FS + L + +
Sbjct: 205 -DSSATMKALKSASDEVGLTARRLNEKGGPLDKLRDGGTALAAGVETFSAATLPKLGEVA 263
Query: 413 RKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ T+ +N + NPQ +++G
Sbjct: 264 DETARTMRQLRRTVNAVDDNPQALIFGN 291
>gi|269124783|ref|YP_003298153.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268309741|gb|ACY96115.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 337
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 31/90 (34%), Gaps = 2/90 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ P ++ + GL ++ V+ G+ VG++ + L I
Sbjct: 31 RPFADPGTRLVAEFGRAGQGLGDNAPVKIRGMDVGKVTKVELTA--AGRVRVTMHIDRKV 88
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ + TA I + G ++ L E
Sbjct: 89 RVPDTVTAAIEPTSVFGPKFVNLKPGPHEH 118
>gi|120406148|ref|YP_955977.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958966|gb|ABM15971.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 355
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 37/106 (34%), Gaps = 5/106 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+F ++++ + + + G++ +SV +GI
Sbjct: 10 SNPLRTGIFGIALVTCLVLVSFGYTSL-PFWPQGKSYEAYF-ADAGGITPGNSVNVSGIS 67
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VG++ + L + + + + + + I+T + G
Sbjct: 68 VGKVSAVELAGD---AAKITFTVDREVKVGDQSLVAIKTDTVLGEK 110
>gi|169631637|ref|YP_001705286.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243604|emb|CAM64632.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 417
Score = 70.7 bits (170), Expect = 4e-10, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 52/142 (36%), Gaps = 4/142 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + G+ +++ L + + + + EV I +P S GL + V
Sbjct: 15 MGHRQRFWLSGMALLATLLVACAYLMVGALRARAFASTYEVSIELPES-GGLIPEQDVAL 73
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + P +A+ I + T + AG Y++ + +
Sbjct: 74 RGMRVGRVDSVTPSPRGP---IARIHIESGVKIPVGTPVRVSGLSPAGEQYVDFAPVTTA 130
Query: 121 KKTIFQIATERNQRAMITATPS 142
+ + +A + + S
Sbjct: 131 GPYLSNGSVITRGQATVPVSLS 152
>gi|325675358|ref|ZP_08155042.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|325553329|gb|EGD23007.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 415
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 74/263 (28%), Gaps = 5/263 (1%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ SV G+ S VR G+ VG + + + + +
Sbjct: 36 GTTKITAYFDKSV-GIYEGSDVRVLGVKVGTVDSVEPQGD---QVQVTMTVDRGVDIPAD 91
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS- 155
A T + YI+L+ + + + AT +R + ++
Sbjct: 92 AKAAQVTPSVVSDRYIQLTPVYTGGEKMANDATIPRERTATPVEVDQLYASVTELSEALG 151
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
++ + +++ L + T L+ + T +
Sbjct: 152 PNGANKDGALSNLVDTAAANLDGNGDALGNTFTQLSAAARTLSDSRADIFDTVKNLQVFV 211
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ D A + EN+ ++ N + V V D RE Q
Sbjct: 212 SALAANDEQVRQFNTQLADFSGYLAGEKENLGLALNQLSLALGDVARFVEDNRELLQGNI 271
Query: 276 EVGQKIDHLLSDFSSKMKSKETS 298
E + ++D + +
Sbjct: 272 EGLTTVTQTVADQRDSLAEALVT 294
>gi|153212032|ref|ZP_01947849.1| paraquat-inducible protein B [Vibrio cholerae 1587]
gi|124116828|gb|EAY35648.1| paraquat-inducible protein B [Vibrio cholerae 1587]
Length = 542
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 33/392 (8%), Positives = 103/392 (26%), Gaps = 33/392 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLA 107
LS V + G VGR+ D E D + + + +
Sbjct: 168 AGKLSVGDPVMYEGFTVGRVESTQFDVESKKAQYQLFIFAPYDKLVNTRSFFWLNSGINL 227
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ L +++ + + + + +
Sbjct: 228 QLNAEGLEFSLGSIESLLKGGVTFG-----------------QLQEDDSGQQITQQMTEF 270
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ + K + + ++ + K + + + T+
Sbjct: 271 LLFDDVKQIREGMYGDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVY 330
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + L ++ + + ++ + + + + L D
Sbjct: 331 INIKRIPVLVRIELGRLYDNFGTTDLPNLKKRMQDEFAKGLKASLKTGNLVT--GALYID 388
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + +++ + + ++ + + + S LN +
Sbjct: 389 TDYFPDEPADPLTQFDGYPMFPTKQGGFAEVQKQVTELLRKLNGLPMDDTLAS-LNSMLK 447
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
L++ I +E +L D Q ++ T + +
Sbjct: 448 TSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFGPE------------STVYRE 495
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ +R+L + + F L P +++G
Sbjct: 496 LETTLRELNQVMAEFKPVLRTINEKPNALIFG 527
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH--------SLAKALI 87
G E ++ SV GL + V + G+ +G + + L E N L + +
Sbjct: 285 GDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVYINIKRIPVLVRIEL 344
>gi|296138969|ref|YP_003646212.1| hypothetical protein Tpau_1242 [Tsukamurella paurometabola DSM
20162]
gi|296027103|gb|ADG77873.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 707
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/297 (12%), Positives = 96/297 (32%), Gaps = 15/297 (5%)
Query: 4 KNYYTSVGLF--VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + G+F V + + ++ + E + + VR
Sbjct: 19 RRNQLNWGIFGAVATAIILLIAGYLFV-----FQPGTKEYSADFKE-AQAVQSGVDVRVA 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
GI VG++ + L + K + + L +TT +++ G Y+ LS +
Sbjct: 73 GISVGKVSDVELLDD---RVRVKFRVDNNIFLGDATTVSMKMLTTVGGYYMALSPMGT-- 127
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + +M + E + + + + ++ E +E+ +
Sbjct: 128 SDLGSKPIPPERVSMPYSLLETFQAATPKVEK--VQATPIRQSMSQLNEALEQQPESIRN 185
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ T + +L N + D+ +V S + N + + M A +
Sbjct: 186 TVGTFNRMLDNILRQQDQAGDFVKVMAEYSTTVNQNGQLLLSLMRNMSMFFAAAEVNLAG 245
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ ++ + + + +++V F + K L+ +++ +
Sbjct: 246 FKSYLTNTTQLVQRLAPLLNVYLNNVDPLASRFDALVAKARELVKQAEPAIQNAKDM 302
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 39/315 (12%), Positives = 76/315 (24%), Gaps = 7/315 (2%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ SV GL ++V G P+G+I + + I D
Sbjct: 371 NLTTQTQAYCAELDNSV-GLYKGNTVAQFGYPIGKITDITPNGATT---RVDFEIPADRK 426
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
L + L IEL K T N + ++ T S +
Sbjct: 427 LPTNVGVVAVADSLVAQRRIELLETYKGGPTWQPGKCITNSKTPLSITESLQAVSKVVND 486
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
T + + I + K T I + L + + M +
Sbjct: 487 LTKAGGDEEFKKAMASIPALNKATQGTGPEISEATNKLGELMRNPGPGMGDVAAILDAFA 546
Query: 213 SKNTFNTIT-DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + +++ + V +
Sbjct: 547 PASDGLVQNWGEMREFFAKYAFRIKNVGEPLMDTGIGAFPQLVPLLKTLSTIFDKYGAFI 606
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
EV +L+ S + L + + + +IT + +
Sbjct: 607 APLLEVTVPATTVLAATSKQFGDL--LNILPPLIRAFQVSVDKKTLATKITYRPPSSLVP 664
Query: 332 INTIENITSNLNDSS 346
+NLN +
Sbjct: 665 SKNPAQTCNNLNRFA 679
>gi|294139020|ref|YP_003554998.1| paraquat-inducible protein B [Shewanella violacea DSS12]
gi|293325489|dbj|BAJ00220.1| paraquat-inducible protein B [Shewanella violacea DSS12]
Length = 553
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/396 (9%), Positives = 97/396 (24%), Gaps = 25/396 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L V + G VGR+ + D + + + I + A + +
Sbjct: 173 AGKLGVGDPVLYEGFTVGRVESVSFDIKS-KLANYQLFIFE----PYDSLARTNSAFMML 227
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+ + + E +T + E S H +
Sbjct: 228 SGFNIQMNAEG--VNVNVGSLESLMTGGVTFMTPDGDSESRQTEQLVHYRLFDSVHDYRE 285
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + + I + + T + P + + ++ +
Sbjct: 286 KMYEKHLDFVMMFTESIRGLKVGAPIEYRGIKIGTVKKVPLRLPTSKEGFSNKEIPVLVR 345
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ I LE +Q S S + ++ K + L +
Sbjct: 346 IDLGRIYDHSDEGSLEELQASFETEFNSGLRATLKTGNLLTGALYIGTDLYKGEKLPN-- 403
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + + T+ ++ +
Sbjct: 404 ----TRQYAGFNIFPTKTGELAEVQKQLTELLHKFNKLPVEDTLKSMTATLKVSQKTLLS 459
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ + ++ + + SL D + ++ + T ++
Sbjct: 460 AERVANDLDRLLKQNDTQSLPGDIRTSLQQIQKTLNAFGPDAAP------------YQNL 507
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + + +E + L P +V+G +K
Sbjct: 508 EGALSRFEEVMIELQPVLRQLNEKPNSLVFGDDKAK 543
Score = 51.1 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 9/68 (13%), Positives = 21/68 (30%), Gaps = 6/68 (8%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------DQEYPNHSLAKALIRPDTPLY 94
++ S+ GL + + + GI +G + + L + I
Sbjct: 294 FVMMFTESIRGLKVGAPIEYRGIKIGTVKKVPLRLPTSKEGFSNKEIPVLVRIDLGRIYD 353
Query: 95 PSTTATIR 102
S ++
Sbjct: 354 HSDEGSLE 361
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 42/445 (9%), Positives = 128/445 (28%), Gaps = 36/445 (8%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE 76
+ I+ + GP+ + + + G+ ++++ + VG + + L ++
Sbjct: 30 ILALAIGIWMFVQYISSQGPVITIRM---PNASGIEIGKTAIKSLSVNVGVVTNVQLSED 86
Query: 77 -YPNHSLAKALIRPDTPLYPSTTATI-----------RTQGLAGITYIELSTLRKEKKTI 124
A+ D L T+ + L YIE+ ++
Sbjct: 87 YSYTLVTAQMNRDSDRMLKEDTSFWVVKPRIGSGGITGLDTLLSGAYIEMQPGDDKEDRE 146
Query: 125 FQIATERNQRAMITAT-PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+A E A + A I + +E++ + + +AN
Sbjct: 147 HFVALENPPVAPVDAKGLRIILTSHHAGKLGVGDPVLYEGFTVGRVESVSFDIKSKLANY 206
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ ++++ + +++ + L + + + + ++
Sbjct: 207 QLFIFEPYDSLARTNSAFMMLSGFNIQMNAEGVNVNVGSLESLMTGGVTFMTPDGDSESR 266
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ Q+ S +++ + I L + + + +
Sbjct: 267 QTEQLVHYRLFDSVHDYREKMYEKH--LDFVMMFTESIRGLKVGAPIEYRGIKIGTVKKV 324
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF--AELMSKINNISA 361
++ + + + ++ E L S + + L + + +
Sbjct: 325 PLRLPTSKEGFSNKEIPVLVRIDLGRIYDHSDEGSLEELQASFETEFNSGLRATLKTGNL 384
Query: 362 LKENNSLFKDA--QRAMHTFRDTS---------EKINRYIPSIGNNLQNFS----QSGLN 406
L + D + R + ++ + L F+ + L
Sbjct: 385 LTGALYIGTDLYKGEKLPNTRQYAGFNIFPTKTGELAEVQKQLTELLHKFNKLPVEDTLK 444
Query: 407 DIQNLVRKLQETVNHFDDCLNNFER 431
+ ++ Q+T+ + N+ +R
Sbjct: 445 SMTATLKVSQKTLLSAERVANDLDR 469
>gi|291454706|ref|ZP_06594096.1| secreted protein [Streptomyces albus J1074]
gi|291357655|gb|EFE84557.1| secreted protein [Streptomyces albus J1074]
Length = 351
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 80/262 (30%), Gaps = 12/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
G GL VR G+ VG++ G+ LD ++ D +
Sbjct: 44 LVGGGTTYTADFSE-AAGLGDGDEVRVAGVKVGQVTGVALDG---AKVKVTFKVQ-DAWV 98
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+TA I + L G Y+ L + A + R +T T S + + +
Sbjct: 99 GDRSTAAIAIKTLLGEKYLAL-------DPLGSHAQDPGARIPLTRTTSPYDVTSAFQDL 151
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+S + + + E I + ++ +T L+ + I K S
Sbjct: 152 SSTVDEIDTGKLAESFEAISDTFKDSPPHVRNAATGLSALSASISKRDAKLAELLEGSTR 211
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
L ++ Q + I+ K S ++ V D +
Sbjct: 212 FTKTLKNRKSSFETLIEDGGPLLGELKQRRDAIRALLKGSRKLSTELGGLVDDNSKQLGP 271
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ ++ +L +++
Sbjct: 272 TLKALSRVTGVLEKNKTQLDKT 293
>gi|239982863|ref|ZP_04705387.1| secreted protein [Streptomyces albus J1074]
Length = 348
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/262 (15%), Positives = 80/262 (30%), Gaps = 12/262 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
G GL VR G+ VG++ G+ LD ++ D +
Sbjct: 41 LVGGGTTYTADFSE-AAGLGDGDEVRVAGVKVGQVTGVALDG---AKVKVTFKVQ-DAWV 95
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+TA I + L G Y+ L + A + R +T T S + + +
Sbjct: 96 GDRSTAAIAIKTLLGEKYLAL-------DPLGSHAQDPGARIPLTRTTSPYDVTSAFQDL 148
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+S + + + E I + ++ +T L+ + I K S
Sbjct: 149 SSTVDEIDTGKLAESFEAISDTFKDSPPHVRNAATGLSALSASISKRDAKLAELLEGSTR 208
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
L ++ Q + I+ K S ++ V D +
Sbjct: 209 FTKTLKNRKSSFETLIEDGGPLLGELKQRRDAIRALLKGSRKLSTELGGLVDDNSKQLGP 268
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
+ ++ +L +++
Sbjct: 269 TLKALSRVTGVLEKNKTQLDKT 290
>gi|145222694|ref|YP_001133372.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215180|gb|ABP44584.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 486
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 49/136 (36%), Gaps = 6/136 (4%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + +F + + ++ ++ +V + +P + GL S+V
Sbjct: 1 MRVTRQMLIQLLIFSLLAVTALGIMVFGYMRLPEMIGIGQYKVTLELPET-GGLYERSNV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G VG + + L A+ + D + A++R+Q G ++EL
Sbjct: 60 TYRGSQVGIVESVGL---TDRGVAAELSLNSDVSIPADLIASVRSQSAVGEQFVELVPQS 116
Query: 119 KEKKTIFQIATERNQR 134
+ + R
Sbjct: 117 GDGPALRNGDVISRDR 132
>gi|320007315|gb|ADW02165.1| virulence factor Mce family protein [Streptomyces flavogriseus ATCC
33331]
Length = 418
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 49/136 (36%), Gaps = 5/136 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIP-GSVDGLSTDSSVR 59
M + F+V + + + Y G ++I GL T S+V
Sbjct: 1 MITLATRLKNIAFLVIAVLVLGYLGARYADLGHYVGLRGYYTVKIQLPQTGGLFTHSNVT 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGR+ + L E A+ I D P + S A + + G Y++L R
Sbjct: 61 YRGVSVGRVGPIELTDEG---VEAELRIENDAPRIPDSLEAVVASLSAVGEQYVDLRPTR 117
Query: 119 KEKKTIFQIATERNQR 134
K+ + +
Sbjct: 118 KDGPFLENGSVIDQAD 133
>gi|126436259|ref|YP_001071950.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236059|gb|ABN99459.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 367
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/343 (11%), Positives = 95/343 (27%), Gaps = 5/343 (1%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+ V ++ R + + G++ + V +G+ VG+
Sbjct: 10 IKAGIIGVVLMILVIMIGLQPIRLLSWATAL-RYQALFTE-AGGIAGGNDVTVSGLKVGQ 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L +L + L TTA IRT L G + L + Q
Sbjct: 68 VSSVELV---NGDALVSFTVDGKYALGSDTTAHIRTGTLLGERVLALESEGSGTLDRDQP 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + T + + AE + ++ S + + ++ I L T + +S
Sbjct: 125 IPTSRTSSPFSLTDAVSELTANTAETDTDSLNRSLDTLSETLDQIAPQLGPTFDGVSRLS 184
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
L N + +++ T ++ L ++ + + +L +
Sbjct: 185 RSLNNRNESLAELLKTAGDVTGIFSERSQQVNSLILNSNDLLAVLNERRYAITSLLRSTA 244
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
S + + + + +K L+ + +
Sbjct: 245 AVSRELTGVVAENEQELAPTLKHLNEVMAMLEKNRDNLAKILPGAAKYYLTQGEIVSNGA 304
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
N ++ + +D+ +
Sbjct: 305 YYNALVPNIQPAQLLQPFLDYAFGFRRGMDAGQPPDDAGPRAE 347
>gi|238751353|ref|ZP_04612846.1| hypothetical protein yrohd0001_15390 [Yersinia rohdei ATCC 43380]
gi|238710411|gb|EEQ02636.1| hypothetical protein yrohd0001_15390 [Yersinia rohdei ATCC 43380]
Length = 189
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K VGLF++ + F ++ I ++ GL T+S V+
Sbjct: 1 MQTKKSEVWVGLFILIAILAVVFLCLKVADIKSVGNQPTYRIYATFDNIGGLKTNSPVKI 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ G+ LD + + I+ + +++ +RT GL G ++ L+ +
Sbjct: 61 GGVVVGRVAGITLDTQNYSP-RVAMDIQQRYDHIPDTSSLAVRTSGLLGEQFLALNVGFE 119
Query: 120 EKKT 123
+ +
Sbjct: 120 DPEM 123
>gi|300716687|ref|YP_003741490.1| Putative paraquat-inducible protein [Erwinia billingiae Eb661]
gi|299062523|emb|CAX59640.1| Putative paraquat-inducible protein [Erwinia billingiae Eb661]
Length = 536
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/401 (7%), Positives = 93/401 (23%), Gaps = 46/401 (11%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQ 104
+ L S V F + VGRI L ++ D + ++ +
Sbjct: 164 TDDLGSLDVGSPVYFRRVQVGRIASYHLQEDGKGVQLRVFIDAPYDRLVTANSRFWNVSG 223
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + I + P+ A + K ++ +
Sbjct: 224 LDLSVGSNGFQLKTQTVAAIMAGGIAFYTPDSQPSAPANPAAIFPLAADQDKAMAPADGQ 283
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ +
Sbjct: 284 EMTFR-------------------------------LRFEHSVRGLEVGAPVVFASVRIG 312
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ L +I+V +++ + D F E
Sbjct: 313 RVSAVSLDYDPHGYRFPTLVDIEVYPARMGNVLNKLPKSSGDPAMAAAVFTEDLVDHGLR 372
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN- 343
+S + + + + L+ + + + + + +I +N
Sbjct: 373 AQAVASSLLTGQLTLTLDFFPKAAKVPFDRHARPLMLPTIGGGLDEIQQQLADIVGKVNK 432
Query: 344 ----DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + +++ + +L A + + + +S+ + L
Sbjct: 433 MPLESIGNRLDSTLFELSKTLRIVNTQTLPG-ANSLLLSVQKSSDNVQNITSEDSPLLMG 491
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +++ + + R+P+ ++ GR
Sbjct: 492 --------LVQTLQESARAFKAIRNVSDQLSRHPESLIQGR 524
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRP 89
DG +R SV GL + V F + +GR+ + LD + + +L + P
Sbjct: 281 DGQEMTFRLRFEHSVRGLEVGAPVVFASVRIGRVSAVSLDYDPHGYRFPTLVDIEVYP 338
Score = 43.4 bits (99), Expect = 0.086, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 30/79 (37%), Gaps = 5/79 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + I L +S+ GP+ V+ + GL + V+F + VG + + L
Sbjct: 21 LVPMVALVIGITLLIQSHLAAGPLITVV---FTNASGLEAGKTVVKFKEVNVGVVEAVSL 77
Query: 74 DQEYPNHSLAKALIRPDTP 92
+ L + + +
Sbjct: 78 SSDD-AKVLVQVRLNKNAE 95
>gi|215406165|ref|ZP_03418346.1| MCE-family protein Mce1D [Mycobacterium tuberculosis 02_1987]
gi|289747939|ref|ZP_06507317.1| MCE-family protein mce1d [Mycobacterium tuberculosis 02_1987]
gi|289688467|gb|EFD55955.1| MCE-family protein mce1d [Mycobacterium tuberculosis 02_1987]
Length = 530
Score = 70.7 bits (170), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/394 (8%), Positives = 108/394 (27%), Gaps = 21/394 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
V+ L + Y ++ + L V+ G+PVG I +
Sbjct: 20 VVIGSLVVVLALAAGIVGVRLYQKLTNNTVVAYFTQANALYVGDKVQIMGLPVGSIDKIE 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + + +A I L I+L + + A
Sbjct: 80 PAGD---KMKVTFHYQNKYKVPANASAVILNPTLVASRNIQLEPPYRGGPVLADNAVIPV 136
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+R + P+ + + + ++ + + + + +A N
Sbjct: 137 ERTQV---PTEWDELRDSVSHIIDELGPTPEQPKGPFGEVIEAFADGLAGKGKQINTTLN 193
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++S ++ + + L + + + E +++
Sbjct: 194 SLSQALNALNEGRGDFFA------VVRSLALFVNALHQDDQQFVALNKNLAEFTDRLTHS 247
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
S+ + + F + + + H +++ ++ + L+ +
Sbjct: 248 DADLSNAIQQFDSLLAVARPFFAKNREVLTHDVNNLATVTTTLLQPDPLDGLETVLHIFP 307
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + I ++ + +++ N + + S++ + +
Sbjct: 308 TLAANINQLYHPTHGGVVSLSAFTNFANPMEFICSSIQA-GSRLGYQESAELCAQYLAPV 366
Query: 373 QRAMH--------TFRDTSEKINRYIPSIGNNLQ 398
A+ T+ + + I LQ
Sbjct: 367 LDAIKFNYFPFGLNVASTASTLPKEIAYSEPRLQ 400
>gi|260554520|ref|ZP_05826741.1| paraquat-inducible protein [Acinetobacter baumannii ATCC 19606]
gi|260411062|gb|EEX04359.1| paraquat-inducible protein [Acinetobacter baumannii ATCC 19606]
Length = 566
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 39/396 (9%), Positives = 107/396 (27%), Gaps = 39/396 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S + + I VG+I L + ++ Q
Sbjct: 200 DDLGSLDIGSPIYYRRINVGQITAYKLSDDGK---------------------SVELQTF 238
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y + T I N T S + + S+++
Sbjct: 239 IRAPYDKFVTTDTRFWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAAN 298
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLIT 225
K N+ + + + + H + + + +I +
Sbjct: 299 KSRFNLWDSKAEALKEPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYN 358
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQKIDHL 284
+ ++ ++ +EN Q + N D V + T + +D
Sbjct: 359 NYKQIRMRVEAVIYPSRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKF 418
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + + + + + + ++ + N+N
Sbjct: 419 SKAKPATLQILNDGRVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNT 478
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + +L+ +++ + Q + R T + S
Sbjct: 479 AIESTDKLVKQLDG--------KVAPGLQATLDDVRKTVRSSESILSSDAP--------L 522
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++++ + E++P+ I+ G+
Sbjct: 523 QQDVRKALQQMTRAAASLQLMADYIEQHPESIIRGK 558
Score = 44.2 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKAL 86
VI+ S+ GL+ + + F GI +G I + + +
Sbjct: 322 VIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVE 368
>gi|302523375|ref|ZP_07275717.1| secreted protein [Streptomyces sp. SPB78]
gi|302432270|gb|EFL04086.1| secreted protein [Streptomyces sp. SPB78]
Length = 354
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 35/263 (13%), Positives = 75/263 (28%), Gaps = 12/263 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR-PDTP 92
G GL VR G+ VG + + L+ + +R P T
Sbjct: 43 LVGGGTTYSADFSE-AAGLDEGDEVRIAGVKVGEVTSVGLEGD---RVKVAFRVRGPHTW 98
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ TTA I + L G Y+ L + + R ++ T S + + +
Sbjct: 99 IGDRTTAAIAIKTLLGSKYLAL-------DPLGAGRQDPGSRIPLSRTTSPYDVTSALQD 151
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
S + + K E + + ++ T L+ + S+
Sbjct: 152 LGSTIDEVDTGQLAKSFETLSDTFKDSPPDVRTAVKGLSALSRTVSSRDAELARLLKGSE 211
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
L ++ Q ++ + ++ V D E +
Sbjct: 212 QLTKTLQTRKSSFETLIDDGGSLLGELKQRRTAVKALLSGSKALGKELNGLVADNEEQLR 271
Query: 273 TFQEVGQKIDHLLSDFSSKMKSK 295
+ ++ +L + ++
Sbjct: 272 PTLKALGRVTDVLEENQGRLDRT 294
>gi|41406859|ref|NP_959695.1| hypothetical protein MAP0761 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395209|gb|AAS03078.1| hypothetical protein MAP_0761 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 372
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 94/299 (31%), Gaps = 9/299 (3%)
Query: 15 VSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
+ + + I +++ M GL+T + V +G+ VG + +
Sbjct: 14 LIGVVLAVMVILVGLSPDRFIAWATMVRYQALFTE-AGGLATGNPVVVSGMKVGTVSDVK 72
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + +L ++ + L TTA IRT L G + L + +
Sbjct: 73 L---HRGDALVTFALKGNILLGSETTAHIRTGTLLGERMLTLESAGTGTMHPMALIPVSR 129
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + T + + A + ++ S + ++ I + + +S L +
Sbjct: 130 TSSPYSLTEAVSDLTTDTAGTNTTALNQSLDTLAATLDQIAPQMGPAFDALTRLSRTLNS 189
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++ ++ + ++ L + + + Q++ +L N +
Sbjct: 190 RNKNLGELFKSAGDVTGVLSERSQQVNKLILNSDVLLQVLVARRQEIVDLLANTSAVAKQ 249
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
V + + T + V ++ + S + + A S+
Sbjct: 250 LTAL---VHDNESKLAPTLERLNSVTAMLEKNRDNISKALPGLKKFEITVGEAISSMYA 305
>gi|294632693|ref|ZP_06711252.1| virulence factor Mce family protein [Streptomyces sp. e14]
gi|292830474|gb|EFF88824.1| virulence factor Mce family protein [Streptomyces sp. e14]
Length = 412
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/319 (12%), Positives = 90/319 (28%), Gaps = 21/319 (6%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRS-----------------NQYDGPMAEVIIRIP 46
+N +VG +L + L GP +
Sbjct: 2 RNGALAVGASTGGLLALAVGFALALGAFTLTLPRFDGVEDLPLPGGADLGPHPYTVTAEL 61
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
V L ++V+ N + VGR+ + LD H+ I D L A + L
Sbjct: 62 DDVLSLVPQAAVKVNDVAVGRVTAIRLDG---WHARVTMKINGDVRLPADAGARLEQSSL 118
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS-NAENTSKKISDSSRHI 165
G Y++L K+ A F + + ++
Sbjct: 119 LGEKYVQLVAPAKDTTAARLGDGSVIPIARTGRNTEVEEVFGALSLLLNGGGVNQLKTIT 178
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
Q++ + + + +E ++T++ + H + S + +
Sbjct: 179 QELNAALGGRESEVRSTLERVNTLVTDLDDHRGDITEALDAVNRLSATLAGRKDDVRTVL 238
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ +L ++ + V D+ + + +
Sbjct: 239 TDLSPGLKTLDEQRGSLLTMLRSLDTLSGVAVSTVNAAKQDMVADLKALAPTLRALADAG 298
Query: 286 SDFSSKMKSKETSAFLENI 304
SD +++ T F + +
Sbjct: 299 SDLPDSLQALLTYPFTDEV 317
>gi|240169177|ref|ZP_04747836.1| virulence factor Mce family protein [Mycobacterium kansasii ATCC
12478]
Length = 447
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/317 (10%), Positives = 90/317 (28%), Gaps = 10/317 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
V+ S +G+ VR G+ VG+I + + + + +
Sbjct: 33 SNRTHVVAYFDNS-NGIFPGDDVRIRGVNVGKIDKIEPEP---TRVKISFWLDSEYAVPA 88
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
A I + L ++L+ T+ A +R + + +
Sbjct: 89 DAKAVIVSPTLVTARAVQLTPPYTGGATLQNDAVIPQERTAVPVEWDDVRVQLERLTQAL 148
Query: 156 KKISDSSRHI-----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ +N+ + +S L+ H + + +
Sbjct: 149 QPTEPGGSSTLGALVHTAADNLRGQGPAIRDAVIKLSQALSALGDHSGDIFTSVKNIATL 208
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + + + + + + ++ ++ ++ K S V + + T
Sbjct: 209 VTALKDSAGLLETLNGNLASVTGLLADEPGEVAGAVKDLNDVVGKVSSFVADNREALGTT 268
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETS-AFLENIADSTSNMRSSISAIREITDQRQKII 329
+ V ++ L D + T+ A N+ + I+A+ D +
Sbjct: 269 SDKLASVSTALNESLDDIKQLLHILPTTAANAANLYQPAQGSLTGIAAVNNFADPINFLC 328
Query: 330 STINTIENITSNLNDSS 346
I + + +
Sbjct: 329 GAIQAASRLGAEQSAKL 345
>gi|302560797|ref|ZP_07313139.1| virulence factor mce family protein [Streptomyces griseoflavus
Tu4000]
gi|302478415|gb|EFL41508.1| virulence factor mce family protein [Streptomyces griseoflavus
Tu4000]
Length = 178
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 48/132 (36%), Gaps = 7/132 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M + F++ + + + +Y G V +R+P + GL T S V
Sbjct: 1 MITLAVRLKNLAFLLVAVLALSYLGIRYADLGRYVGVADYYTVDVRLPRT-GGLFTHSDV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + +A+ I+ P + T A + G YI+L
Sbjct: 60 TYRGVSVGRVGPIGLTADG---VVAELRIKKSAPRIPADTRAVVAGLSAVGEQYIDLRPE 116
Query: 118 RKEKKTIFQIAT 129
+
Sbjct: 117 SDGGPYLADGTI 128
>gi|239945578|ref|ZP_04697515.1| putative Mce family protein [Streptomyces roseosporus NRRL 15998]
gi|239992045|ref|ZP_04712709.1| putative Mce family protein [Streptomyces roseosporus NRRL 11379]
Length = 394
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/329 (9%), Positives = 79/329 (24%), Gaps = 10/329 (3%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
+ ++ + + + + G+ S +R G+ VG + +
Sbjct: 9 IGAGLALVAVVAATGVSALEEDGKTTVTAYFDRATGVYAGSDLRILGVRVGTVDSVEP-- 66
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
A + + A + L YI+L+ + + A R
Sbjct: 67 -RGKEVKAVLRLDRGIDVPKDAHAVVVAPSLVADRYIQLAPAYDGGPRLAEGAVLPAARN 125
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
ATP ++ ++ S + + + + +
Sbjct: 126 ---ATPVEVDELYASITELSTALGPNGANANGAFARLLDTGAKNLDGNGKAIGDSIEQFG 182
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTIT----DLITSLDKMIKAIDLQKVNQILENIQVSSN 251
K + + + T D + + +N+ +
Sbjct: 183 KATKTLDKSSGDLFDTLKYLQGFTTMLKENDGNVRNAEQQLNTVTTFLADDKKNLSAALK 242
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ QV + R + + E I L D + + + L +
Sbjct: 243 ELGTALGQVKTFIAKNRGSLKKNVEALVPITQTLVDQRASLAEAMDTLPLAAGNVLNAYD 302
Query: 312 RSSISAIREITDQRQKIISTINTIENITS 340
++ + + +
Sbjct: 303 PANRTLNGRTNLNELSMGGPLVEPGAAAE 331
>gi|15641758|ref|NP_231390.1| paraquat-inducible protein B [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585800|ref|ZP_01675594.1| paraquat-inducible protein B [Vibrio cholerae 2740-80]
gi|121729806|ref|ZP_01682241.1| paraquat-inducible protein B [Vibrio cholerae V52]
gi|147675648|ref|YP_001217296.1| paraquat-inducible protein B [Vibrio cholerae O395]
gi|153822796|ref|ZP_01975463.1| paraquat-inducible protein B [Vibrio cholerae B33]
gi|227081901|ref|YP_002810452.1| paraquat-inducible protein B [Vibrio cholerae M66-2]
gi|229508142|ref|ZP_04397647.1| paraquat-inducible protein B [Vibrio cholerae BX 330286]
gi|229511619|ref|ZP_04401098.1| paraquat-inducible protein B [Vibrio cholerae B33]
gi|229518758|ref|ZP_04408201.1| paraquat-inducible protein B [Vibrio cholerae RC9]
gi|229607718|ref|YP_002878366.1| paraquat-inducible protein B [Vibrio cholerae MJ-1236]
gi|254848870|ref|ZP_05238220.1| paraquat-inducible protein B [Vibrio cholerae MO10]
gi|297579329|ref|ZP_06941257.1| paraquat-inducible protein B [Vibrio cholerae RC385]
gi|298498175|ref|ZP_07007982.1| paraquat-inducible protein B [Vibrio cholerae MAK 757]
gi|9656276|gb|AAF94904.1| paraquat-inducible protein B [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121549938|gb|EAX59956.1| paraquat-inducible protein B [Vibrio cholerae 2740-80]
gi|121628458|gb|EAX60949.1| paraquat-inducible protein B [Vibrio cholerae V52]
gi|126519702|gb|EAZ76925.1| paraquat-inducible protein B [Vibrio cholerae B33]
gi|146317531|gb|ABQ22070.1| paraquat-inducible protein B [Vibrio cholerae O395]
gi|227009789|gb|ACP06001.1| paraquat-inducible protein B [Vibrio cholerae M66-2]
gi|227013656|gb|ACP09866.1| paraquat-inducible protein B [Vibrio cholerae O395]
gi|229343447|gb|EEO08422.1| paraquat-inducible protein B [Vibrio cholerae RC9]
gi|229351584|gb|EEO16525.1| paraquat-inducible protein B [Vibrio cholerae B33]
gi|229355647|gb|EEO20568.1| paraquat-inducible protein B [Vibrio cholerae BX 330286]
gi|229370373|gb|ACQ60796.1| paraquat-inducible protein B [Vibrio cholerae MJ-1236]
gi|254844575|gb|EET22989.1| paraquat-inducible protein B [Vibrio cholerae MO10]
gi|297536923|gb|EFH75756.1| paraquat-inducible protein B [Vibrio cholerae RC385]
gi|297542508|gb|EFH78558.1| paraquat-inducible protein B [Vibrio cholerae MAK 757]
Length = 547
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/400 (9%), Positives = 92/400 (23%), Gaps = 37/400 (9%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ L+ V + G VGR+ D E +
Sbjct: 167 VLTNKEAGKLNVGDPVMYEGFTVGRVESAQFDVESKKA---------------------Q 205
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
Q Y +L R I + + +
Sbjct: 206 YQLFIFAPYDKLVNTRSFFWLNSGINL-----------QLNAEGLEFSLGSIESLLKGGV 254
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
Q E+ +P+T + V D + + S +
Sbjct: 255 TFGQLQEEDSGQPITQQLTEFRLFDDVKQIREGMFDDYIEFVMMFDESVRGLKPSAPVEY 314
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + K + + I + ++ + + + +
Sbjct: 315 RGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIELGRLYDNFNKADLPALKSRMQQEFFK 374
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTS-NMRSSISAIREITDQRQKIISTINTIENITSN 341
L + + + + ++ + +
Sbjct: 375 GLKASLKTGNLVTGALYIDTDYYPEEKIDGLKHFDGYPLFPTKQGGFAEVQKQVTELLRK 434
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
LN + ++ +N+ E + ++ I + + L F
Sbjct: 435 LNGLP--MDDTLASLNSTLKTSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFG 492
Query: 402 --QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ +++ +R+L + + F L P +++G
Sbjct: 493 PESTVYRELETTLRELNQVMAEFKPVLRTINEKPNALIFG 532
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY------PNHSLAKALIR 88
E ++ SV GL + V + G+ +G + + L N I
Sbjct: 289 FDDYIEFVMMFDESVRGLKPSAPVEYRGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIE 348
>gi|54027600|ref|YP_121842.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54019108|dbj|BAD60478.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 388
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/301 (12%), Positives = 89/301 (29%), Gaps = 4/301 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ + ++ R N V +++ S GL + V G VG++ + L +
Sbjct: 25 YLLVYVMRVNPLRAE-YTVTVQLDRS-GGLQPGNDVTLRGYRVGKVDSIELI-DRGQAIA 81
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER-NQRAMITATP 141
A A I + T +++ AG YI+ ++ + A + + T TP
Sbjct: 82 ATARIDQRYRIPVDTMVSVQALSGAGEQYIDFRPATEDGPYLADGAVIEFDSERVKTPTP 141
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
S+A + S + ++ + I IS +A S + +
Sbjct: 142 VWSVLDNSSALISQIDPDKFSVILAELDIALSGGPDQLRGLINGISLAMAGLDSLLPQTT 201
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ +++ + +T+ + ++ + + +
Sbjct: 202 NLITNLRTIANTTSNAQPDLATLTANSGALFEQFNNANAEVQRILDEAPGQLASLGAVLD 261
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREI 321
T + F + + L + S A + + + I
Sbjct: 262 TTTDPMTSLATNFVAITRAAQLRLPAMRALFPSLALGAEALGVPAYDNEFHAMIDIWPRP 321
Query: 322 T 322
Sbjct: 322 Y 322
>gi|255744830|ref|ZP_05418780.1| paraquat-inducible protein B [Vibrio cholera CIRS 101]
gi|262161887|ref|ZP_06030905.1| paraquat-inducible protein B [Vibrio cholerae INDRE 91/1]
gi|262169755|ref|ZP_06037446.1| paraquat-inducible protein B [Vibrio cholerae RC27]
gi|255737301|gb|EET92696.1| paraquat-inducible protein B [Vibrio cholera CIRS 101]
gi|262021989|gb|EEY40699.1| paraquat-inducible protein B [Vibrio cholerae RC27]
gi|262028619|gb|EEY47274.1| paraquat-inducible protein B [Vibrio cholerae INDRE 91/1]
Length = 542
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 36/400 (9%), Positives = 92/400 (23%), Gaps = 37/400 (9%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ L+ V + G VGR+ D E +
Sbjct: 162 VLTNKEAGKLNVGDPVMYEGFTVGRVESAQFDVESKKA---------------------Q 200
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
Q Y +L R I + + +
Sbjct: 201 YQLFIFAPYDKLVNTRSFFWLNSGINL-----------QLNAEGLEFSLGSIESLLKGGV 249
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
Q E+ +P+T + V D + + S +
Sbjct: 250 TFGQLQEEDSGQPITQQLTEFRLFDDVKQIREGMFDDYIEFVMMFDESVRGLKPSAPVEY 309
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + K + + I + ++ + + + +
Sbjct: 310 RGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIELGRLYDNFNKADLPALKSRMQQEFFK 369
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTS-NMRSSISAIREITDQRQKIISTINTIENITSN 341
L + + + + ++ + +
Sbjct: 370 GLKASLKTGNLVTGALYIDTDYYPEEKIDGLKHFDGYPLFPTKQGGFAEVQKQVTELLRK 429
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
LN + ++ +N+ E + ++ I + + L F
Sbjct: 430 LNGLP--MDDTLASLNSTLKTSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFG 487
Query: 402 --QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ +++ +R+L + + F L P +++G
Sbjct: 488 PESTVYRELETTLRELNQVMAEFKPVLRTINEKPNALIFG 527
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY------PNHSLAKALIR 88
E ++ SV GL + V + G+ +G + + L N I
Sbjct: 284 FDDYIEFVMMFDESVRGLKPSAPVEYRGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIE 343
>gi|324999477|ref|ZP_08120589.1| MCE family protein [Pseudonocardia sp. P1]
Length = 380
Score = 70.3 bits (169), Expect = 5e-10, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 4/106 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+FV++ L L + + GL + SVR G+ VG + +
Sbjct: 17 IFVIATLLVLLLVAIELG-AGFAVSRGTRYEAVFSDT-SGLQSGDSVRVAGVKVGTVEDV 74
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ E + + P+ + +R L G ++E+S
Sbjct: 75 TV--EDQDRVRVAFDVSEGRPVPQNALLAVRYLNLTGDRFLEVSRG 118
>gi|146329266|ref|YP_001209409.1| paraquat-inducible B family protein [Dichelobacter nodosus
VCS1703A]
gi|146232736|gb|ABQ13714.1| paraquat-inducible protein B family [Dichelobacter nodosus
VCS1703A]
Length = 539
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/408 (10%), Positives = 111/408 (27%), Gaps = 44/408 (10%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFL-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
S GL+ S + + G+ +G+I + DQ + A D ++ T +
Sbjct: 160 ESSKGLNIGSPLYYRGVKIGQIEQIHFGDQFSRIYITAFVRTPYDALIHNDTKFWNASGF 219
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
T +T+ + A + + D ++
Sbjct: 220 ELSFTAAGAQFSMYSMETLALGGIVLSTPD---------------ATLQNHQSFDKNKVF 264
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ A + + + S+ +
Sbjct: 265 NLYPSEKASLESDHFARTYFVLYFEDSVHGLLPHAPVEFNGMTIGEVSEIRLLYDQERKK 324
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD-VRETTQTFQEVGQKIDHL 284
+ ++ A++ ++++ + ++ + + T + + I L
Sbjct: 325 IVTPVVIALEWSRIDRAAADQEMIKTLVAQGLRASLKTGNFLTGKKMIHLALYPDNIGEL 384
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
D S+ + I + ++A+ I I +
Sbjct: 385 TPDRYSRHLTLPV--HNGGIHKIPEQISDIVAAVNHIP------------FTAIGAKTES 430
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ A KE L K Q + + TS++ + ++ ++N S+
Sbjct: 431 LLTHVDHAAESAAGMLAHKEMQQLGKTLQTTLQSVTATSKQAQNSMVNLNEQMRNLSRQL 490
Query: 405 LNDI-------------QNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ Q V+++Q + D + + P ++ G
Sbjct: 491 EATLYGLSPESSLYYSTQQTVQQMQILMRTIDGVMQKIKEKPNALLMG 538
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/262 (11%), Positives = 74/262 (28%), Gaps = 11/262 (4%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
++ SV GL + V FNG+ +G + + L + + ++
Sbjct: 281 RTYFVLYFEDSVHGLLPHAPVEFNGMTIGEVSEIRLLYDQERKKIVTPVVIALEWSRIDR 340
Query: 98 TAT----IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
A I+T G+ + K + +A + +T
Sbjct: 341 AAADQEMIKTLVAQGLRASLKTGNFLTGKKMIHLALYPDNIGELTP---DRYSRHLTLPV 397
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ I I I+ + T I ++ + M + +
Sbjct: 398 HNGGIHKIPEQISDIVAAVNHIPFTAIGAKTESLLTHVDHAAESAAGMLAHKEMQQLGKT 457
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
T + + +++ + ++ + + + ++T Q
Sbjct: 458 LQTTLQSVTATSKQAQNSMVNLNEQMRNLSRQLEATLYGL----SPESSLYYSTQQTVQQ 513
Query: 274 FQEVGQKIDHLLSDFSSKMKSK 295
Q + + ID ++ K +
Sbjct: 514 MQILMRTIDGVMQKIKEKPNAL 535
>gi|111018967|ref|YP_701939.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110818497|gb|ABG93781.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 359
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 44/310 (14%), Positives = 102/310 (32%), Gaps = 9/310 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V L V +++ ++ + +N G + V L+ VR G+ VG++
Sbjct: 8 LVKLIVFAVVTILATALLAATIANFGGGGGTKFNAIFSD-VTSLNEGDEVRIAGVRVGQV 66
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + + + + L STTATIR + L G YI L ++
Sbjct: 67 EKIAIHDD--REAEVQFTVSERDWLPASTTATIRFRNLVGQRYIALEQGEGQQGMKMSG- 123
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ M P+ + + + + + + I+ + E +
Sbjct: 124 --GDTIPMERTKPAVNLTTLFDGFRPLFQTLSADDVNKLSYQIIQVFQGESGTITELVKN 181
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL---QKVNQILEN 245
+ + DK V + +D T N D + SL + + + +
Sbjct: 182 TASLTNTVADKDRVIGAVINNLNDVLATVNQRDDQLDSLIVNTQQLVTGLANERGTVGSA 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + ++D + T ++E+ + + ++ +S +++ A
Sbjct: 242 VTSLAGLTDATADLLEPTRPSIQESITSLNTLATTLNRNSDTVNSVLQTLPVKLEKLGRA 301
Query: 306 DSTSNMRSSI 315
S +
Sbjct: 302 ASYGSWFQFY 311
>gi|254773839|ref|ZP_05215355.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 377
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 94/299 (31%), Gaps = 9/299 (3%)
Query: 15 VSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
+ + + I +++ M GL+T + V +G+ VG + +
Sbjct: 19 LIGVVLAVMVILVGLSPDRFIAWATMVRYQALFTE-AGGLATGNPVVVSGMKVGTVSDVK 77
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + +L ++ + L TTA IRT L G + L + +
Sbjct: 78 L---HRGDALVTFALKGNILLGSETTAHIRTGTLLGERMLTLESAGTGTMHPMALIPVSR 134
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + T + + A + ++ S + ++ I + + +S L +
Sbjct: 135 TSSPYSLTEAVSDLTTDTAGTNTTALNQSLDTLAATLDQIAPQMGPAFDALTRLSRTLNS 194
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++ ++ + ++ L + + + Q++ +L N +
Sbjct: 195 RNKNLGELFKSAGDVTGVLSERSQQVNKLILNSDVLLQVLVARRQEIVDLLANTSAVAKQ 254
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
V + + T + V ++ + S + + A S+
Sbjct: 255 LTAL---VHDNESKLAPTLERLNSVTAMLEKNRDNISKALPGLKKFEITVGEAISSMYA 310
>gi|262190327|ref|ZP_06048592.1| paraquat-inducible protein B [Vibrio cholerae CT 5369-93]
gi|262033784|gb|EEY52259.1| paraquat-inducible protein B [Vibrio cholerae CT 5369-93]
Length = 542
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/394 (9%), Positives = 90/394 (22%), Gaps = 37/394 (9%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V + G PVGR+ D E + Q
Sbjct: 168 AGNLNVGDPVMYEGFPVGRVESAQFDVESKKA---------------------QYQLFIF 206
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y +L R I + + + Q
Sbjct: 207 APYDKLVNTRSFLWLNSGINL-----------QLNAEGLEFSLGSIESLLKGGVTFGQSH 255
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
E+ +P+T + V D + + S + +
Sbjct: 256 EEDSGQPITQQLTEFRLFDDVKQIREGMFDDYIEFVMMFDESVRGLKPSAPVEYRGLRIG 315
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ K + + I + ++ + + + + L +
Sbjct: 316 TVSKVPLRTRTSNIDISTNRIPVLVRIELGRLYDNFNKADLPALKSRMQQEFFKGLKASL 375
Query: 289 SSKMKSKETSAFLENIADSTS-NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + ++ + + LN
Sbjct: 376 KTGNLVTGALYIDTDYYPEEKIDGLKHFDGYPLFPTKQGGFAEVQKQVTELLRKLNGLP- 434
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS--QSGL 405
+ + +N E + ++ I + + L F +
Sbjct: 435 -MDDTLDSLNGTLKASEKLLASAERILKKQETQNLPADIQASLKQLETTLGGFGPESTVY 493
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+++ +R+L + + F L P +++G
Sbjct: 494 RELETTLRELNQVMAEFKPVLRTINEKPNALIFG 527
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY------PNHSLAKALIR 88
E ++ SV GL + V + G+ +G + + L N I
Sbjct: 284 FDDYIEFVMMFDESVRGLKPSAPVEYRGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIE 343
>gi|215414037|ref|ZP_03422696.1| MCE-family protein Mce1D [Mycobacterium tuberculosis 94_M4241A]
gi|298527564|ref|ZP_07014973.1| mce-family protein mce1d [Mycobacterium tuberculosis 94_M4241A]
gi|298497358|gb|EFI32652.1| mce-family protein mce1d [Mycobacterium tuberculosis 94_M4241A]
Length = 530
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/394 (8%), Positives = 108/394 (27%), Gaps = 21/394 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
V+ L + Y ++ + L V+ G+PVG I +
Sbjct: 20 VVIGSLVVVLALAAGIVGVRLYQKLTNNTVVAYFTQANALYVGDKVQIMGLPVGSIDKIE 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + + +A I L I+L + + A
Sbjct: 80 PAGD---KMKVTFHYQNKYKVPANASAVILNPTLVASRNIQLEPPYRGGPVLADNAVIPV 136
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+R + P+ + + + ++ + + + + +A N
Sbjct: 137 ERTQV---PTEWDELRDSVSHIIDELGPTPEQPKGPFGEVIEAFADGLAGKGKQINTTLN 193
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++S ++ + + L + + + E +++
Sbjct: 194 SLSQALNALNEGRGDFFA------VVRSLALFVNALHQDDQQFVALNKNLAEFTDRLTHS 247
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
S+ + + F + + + H +++ ++ + L+ +
Sbjct: 248 DADLSNAIQQFDSLLAVARPFFAKNREVLTHDVNNLATVTTTLLQPDPLDGLETVLHIFP 307
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + I ++ + +++ N + + S++ + +
Sbjct: 308 TLAANINQLYHPTHGGVVSLSAFTNFANPMEFICSSIQA-GSRLGYQESAELCAQYLAPV 366
Query: 373 QRAMH--------TFRDTSEKINRYIPSIGNNLQ 398
A+ T+ + + I LQ
Sbjct: 367 LDAIKFNYFPFGLNVASTASTLPKEIAYSEPRLQ 400
>gi|42523260|ref|NP_968640.1| ABC-type multidrug transport system substrate-binding protein
[Bdellovibrio bacteriovorus HD100]
gi|39575465|emb|CAE79633.1| ABC-type multidrug transport system substrate-binding protein
[Bdellovibrio bacteriovorus HD100]
Length = 317
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 33/283 (11%), Positives = 82/283 (28%), Gaps = 4/283 (1%)
Query: 1 MESKNYYT--SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ K GLFVV + + + + P + DG+ + V
Sbjct: 2 MKVKFNKFERIAGLFVVLAIVGVILTAISAAVKQGWFEPKVRYTTTF-ENADGIHQGTLV 60
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ G + + L+ + L + + ++T + + G +EL+
Sbjct: 61 QMAGLRAGAVETVELESDNRIRVGFYVLGKFQDRIRENSTVQLIRPFIIGERVLELTVGN 120
Query: 119 KEKKTIF-QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+E + I A + + + SG + ++ S ++ + L
Sbjct: 121 EEFEVIPGHSAVKSIETVDLMTLMSGKHLNSYLSKLGGILESVQVLVDAFADKSRAESLV 180
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
I ++ + L + K+ T I + + + +
Sbjct: 181 RVIDRLDPLVKNLNTMSMEVIKLSKQATHDDGVQKLVGNLAVTTREINKILPELNEQNPE 240
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ Q + V ++ + + +
Sbjct: 241 MAKDLAVMTQNLAVMTKALGPAVKQVEGELPGASVRLVQALDE 283
>gi|317125889|ref|YP_004100001.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
gi|315589977|gb|ADU49274.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
Length = 404
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 42/342 (12%), Positives = 99/342 (28%), Gaps = 9/342 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G + +V GL S VR G+ VG++ + H + +
Sbjct: 43 SGAPTTISADFTRAV-GLYPGSDVRILGVKVGQVDVVEPQG---RHVRVTFSVDSRHRIP 98
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM-----ITATPSGINYFIS 149
A I L Y++L + + A R + S + ++
Sbjct: 99 ADARAAIVAPSLVSDRYVQLLPVWTAGPAMADGARIPLSRTAVPVELDRVSQSLDDLMVA 158
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ + K S ++ N++ + +S + H + T Q
Sbjct: 159 LGPDGANKDGALSALLETSAANLDGNGARLNQTVRDLSRAVTTLADHKGDLFGTVQNLQT 218
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ N + S + ++ + + ++ + S V + V+
Sbjct: 219 FTTMLADNNAAVRRLNSDLATVALQLREERDNLRGALENLGVALDEVSTFVKDNRSLVKA 278
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
V + + +++ + + A + D ++
Sbjct: 279 DVDGLVSVTSSLVTQRQALAEALENAPVALTNLSHAYHPQTGTLDTRNNAKGLDDPLLLV 338
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+I T T N + ++ +SA+ E ++L +
Sbjct: 339 CSILTGPTGTGNSGLCDDLKRAVEPRLPQLSAVPEGSTLRGE 380
>gi|293406802|ref|ZP_06650728.1| yrbD protein [Escherichia coli FVEC1412]
gi|298382543|ref|ZP_06992140.1| yrbD protein [Escherichia coli FVEC1302]
gi|312972533|ref|ZP_07786707.1| mce related family protein [Escherichia coli 1827-70]
gi|331648993|ref|ZP_08350081.1| VpsC [Escherichia coli M605]
gi|331674723|ref|ZP_08375482.1| VpsC [Escherichia coli TA280]
gi|291426808|gb|EFE99840.1| yrbD protein [Escherichia coli FVEC1412]
gi|298277683|gb|EFI19199.1| yrbD protein [Escherichia coli FVEC1302]
gi|310334910|gb|EFQ01115.1| mce related family protein [Escherichia coli 1827-70]
gi|315617276|gb|EFU97885.1| mce related family protein [Escherichia coli 3431]
gi|323154408|gb|EFZ40609.1| mce related family protein [Escherichia coli EPECa14]
gi|323165154|gb|EFZ50944.1| mce related family protein [Shigella sonnei 53G]
gi|323173547|gb|EFZ59176.1| mce related family protein [Escherichia coli LT-68]
gi|323183147|gb|EFZ68545.1| mce related family protein [Escherichia coli 1357]
gi|323936113|gb|EGB32407.1| hypothetical protein ERCG_02571 [Escherichia coli E1520]
gi|323946953|gb|EGB42969.1| hypothetical protein EREG_01530 [Escherichia coli H120]
gi|323961152|gb|EGB56766.1| hypothetical protein ERGG_02422 [Escherichia coli H489]
gi|323970244|gb|EGB65515.1| hypothetical protein ERHG_03660 [Escherichia coli TA007]
gi|331042740|gb|EGI14882.1| VpsC [Escherichia coli M605]
gi|331068162|gb|EGI39558.1| VpsC [Escherichia coli TA280]
gi|332090710|gb|EGI95804.1| mce related family protein [Shigella boydii 3594-74]
Length = 174
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 51/136 (37%), Gaps = 2/136 (1%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+F+++ L + F + + ++ GL S V G+ VGR+
Sbjct: 2 GIFLLAALLAALFVCLKAANVTSIRTEPTYTLYATFDNIGGLKARSPVSIGGVVVGRVAD 61
Query: 71 LFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ LD + I + +++ +IRT GL G Y+ L+ ++ + I
Sbjct: 62 ITLDPKTY-LPRVTLEIEQRYNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTAILK 120
Query: 130 ERNQRAMITATPSGIN 145
+ + + +
Sbjct: 121 DGDTIQDTKSAMVLED 136
>gi|186472352|ref|YP_001859694.1| hypothetical protein Bphy_3499 [Burkholderia phymatum STM815]
gi|184194684|gb|ACC72648.1| Mammalian cell entry related domain protein [Burkholderia
phymatum STM815]
Length = 324
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG F++ + +I + + Q + ++ SV GL S V F
Sbjct: 1 MNPR--PAVVGGFILGAITLGIAAIVFFGGA-QLFAKTSNAVVFFGESVAGLDVGSPVTF 57
Query: 61 NGIPVGRIVGLFL 73
+G+ +G + + +
Sbjct: 58 HGVRIGSVKRIAV 70
Score = 49.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/174 (10%), Positives = 56/174 (32%), Gaps = 1/174 (0%)
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
++ + L+ + S L ++ + ++ + + + +
Sbjct: 149 DAPEIPAIPSDLDQLRNQLAGLPLRELSGSVQQALSSLTRLSDHVDVLLEPLAQSVIRTA 208
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI 386
+ + T ++ + + A ++ ++ + R + T +
Sbjct: 209 DAATQTLHATDATVRHVEADATHTLHDLDLLLVDAREQLDARSGELSRTLVTTDRAVRQA 268
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + S+ + L + D++ R L + + ER+P +V GR
Sbjct: 269 DTLLESLND-LADPHAQFRGDLEATARDLAVSASRLRSFAETVERHPNALVIGR 321
>gi|110596849|ref|ZP_01385139.1| Mammalian cell entry-related protein [Chlorobium ferrooxidans DSM
13031]
gi|110341536|gb|EAT59996.1| Mammalian cell entry-related protein [Chlorobium ferrooxidans DSM
13031]
Length = 292
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 1 MES----KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M++ K G+F V + F+ + + +++ + V I + V GL+ ++
Sbjct: 1 MKNPNALKWSDLRTGIFFVIGIGFAAYLGLVIGKNSNLFSGVTNVRI-LSRDVQGLAENN 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
V +G +G + + + + + +A+ ++ + + + ATI++ G+ G Y++
Sbjct: 60 FVSVSGKKIGTVSKMSFVTSHDSLYVVAELKLKTEFAGLVTKDSKATIKSLGILGDKYVD 119
Query: 114 LSTLRKEK 121
+ T +
Sbjct: 120 IITGKGPP 127
>gi|118465942|ref|YP_880211.1| virulence factor Mce [Mycobacterium avium 104]
gi|118167229|gb|ABK68126.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 372
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/299 (12%), Positives = 94/299 (31%), Gaps = 9/299 (3%)
Query: 15 VSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
+ + + I +++ M GL+T + V +G+ VG + +
Sbjct: 14 LIGVVLAVMVILVGLSPDRFIAWATMVRYQALFTE-AGGLATGNPVVVSGMKVGTVSDVK 72
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + +L ++ + L TTA IRT L G + L + +
Sbjct: 73 L---HRGDALVTFALKGNILLGSETTAHIRTGTLLGERMLTLESAGTGTMHPMALIPVSR 129
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + T + + A + ++ S + ++ I + + +S L +
Sbjct: 130 TSSPYSLTEAVSDLTTDTAGTNTTALNQSLDTLAATLDQIAPQMGPAFDALTRLSRTLNS 189
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++ ++ + ++ L + + + Q++ +L N +
Sbjct: 190 RNKNLGELFKSAGDVTGVLSERSQQVNKLILNSDVLLQVLVARRQEIVDLLANTSAVAKQ 249
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
V + + T + V ++ + S + + A S+
Sbjct: 250 LTAL---VHDNESKLAPTLERLNSVTAMLEKNRDNISKALPGLKKFEITVGEAISSMYA 305
>gi|318059761|ref|ZP_07978484.1| secreted protein [Streptomyces sp. SA3_actG]
gi|318075806|ref|ZP_07983138.1| secreted protein [Streptomyces sp. SA3_actF]
Length = 354
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/263 (12%), Positives = 74/263 (28%), Gaps = 12/263 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR-PDTP 92
G GL VR G+ VG + + L+ + +R P T
Sbjct: 43 LVGGGTTYSADFSE-AAGLDEGDEVRIAGVKVGEVTSVGLEGD---RVKVAFRVRGPHTW 98
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ TTA I + L G Y+ L + + R ++ T S + + +
Sbjct: 99 IGDRTTAAIAIKTLLGSKYLAL-------DPLGAGRQDPGSRIPLSRTTSPYDVTSALQD 151
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
S + + K E + + ++ T L+ + +
Sbjct: 152 LGSTIDEVDTGQLAKSFETLSDTFKDSPPDVRTAVKGLSALSRTVSSRDAELARLLKGGE 211
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
L ++ Q ++ + ++ V D E +
Sbjct: 212 QLTKTLETRKSSFETLIDDGGSLLGELQQRRTAVKALLSGSKALGKELNGLVADNEEQLR 271
Query: 273 TFQEVGQKIDHLLSDFSSKMKSK 295
+ ++ +L + ++
Sbjct: 272 PTLKALGRVTDVLEENQGRLDRT 294
>gi|54022507|ref|YP_116749.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014015|dbj|BAD55385.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 423
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 38/127 (29%), Gaps = 4/127 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V P S +GL VR G+ VGRI + + L
Sbjct: 38 GTTTVTAYFP-STNGLYAGDDVRVLGVKVGRIDKVEP---GHERVKVTMTVDRGVDLPAD 93
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A I + L +I+L+ + + +R + I +S T
Sbjct: 94 ARAVIVSPSLVTARFIQLAPAYTGGEKLGDGDEIPIERTAVPVEWDDIKAELSKLATTLG 153
Query: 157 KISDSSR 163
+ D +
Sbjct: 154 PVGDDQQ 160
>gi|170690257|ref|ZP_02881424.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
gi|170144692|gb|EDT12853.1| Mammalian cell entry related domain protein [Burkholderia graminis
C4D1M]
Length = 539
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 36/400 (9%), Positives = 103/400 (25%), Gaps = 41/400 (10%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + + + + VG+I LD + + +L D + P T + +
Sbjct: 180 VDAGTPIFYRRLQVGQITSFALDPDGRSVTLHVFVNAPYDKFVRPDTRFWHASGVDIALD 239
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +I + P + I
Sbjct: 240 TNGVKINTQSLVSILVGGVAFDTLEHSLNEPPAAAGASFTLFENLGEAMKRQDRI----- 294
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + + + TI ++ +
Sbjct: 295 ----------------------VTRFVAEFDDSVRGLTVGAPLDFRGITIGEVSGIYTRF 332
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + N +S V + R+ G ++ + +
Sbjct: 333 DREARKLSIVVEVAFYPERFTNRYESGPTGGPVVKNTRDFADYLVSKGLRLQLRTGNLLT 392
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ F + ++ + S + + + ++ K A
Sbjct: 393 GQRYLAVDFFPDAPKSKIDWNKNPPQYPTVPNTLQSLQDSMSRLVAKLNTIPFEAIGKNA 452
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ + N + + A+ A+ + T N + + ++ +
Sbjct: 453 QATLQSANSLLTHVDKDVVPSARDALTAAQGTMTSANGALQP--------DSALQQNVGD 504
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ +L +T + ER+P+ +V G+ + +P
Sbjct: 505 AMNQLAQTAAAVRTLADYLERHPEALVRGK-----REEQP 539
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 6/72 (8%)
Query: 19 FFSFFSIYWLSRSNQYDGPM----AEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--F 72
+ S + + SV GL+ + + F GI +G + G+
Sbjct: 272 AAAGASFTLFENLGEAMKRQDRIVTRFVAEFDDSVRGLTVGAPLDFRGITIGEVSGIYTR 331
Query: 73 LDQEYPNHSLAK 84
D+E S+
Sbjct: 332 FDREARKLSIVV 343
>gi|326905928|gb|EGE52861.1| MCE-family protein mce1D [Mycobacterium tuberculosis W-148]
Length = 530
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/394 (8%), Positives = 109/394 (27%), Gaps = 21/394 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
V+ L + Y ++ + L V+ G+PVG I +
Sbjct: 20 VVIGSLVVVLALAAGIVGVRLYQKLTNNTVVAYFTQANALYVGDKVQIMGLPVGSIDKIE 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + + +A I L I+L + + A
Sbjct: 80 PAGD---KMKVTFHYQNKYKVPANASAVILNPTLVASRNIQLEPPYRGGPVLADNAVIPV 136
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+R + P+ + + + ++ + + + + +A + N
Sbjct: 137 ERTQV---PTEWDELRDSVSHIIDELGPTPEQPKGPFGEVIEAFADGLAGKGKQTNTTLN 193
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++S ++ + + L + + + E +++
Sbjct: 194 SLSQALNALNEGRGDFFA------VVRSLALFVNALHQDDQQFVALNKNLAEFTDRLTHS 247
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
S+ + + F + + + H +++ ++ + L+ +
Sbjct: 248 DADLSNAIQQFDSLLAVARPFFAKNREVLTHDVNNLATVTTTLLQPDPLDGLETVLHIFP 307
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + I ++ + +++ N + + S++ + +
Sbjct: 308 TLAANINQLYHPTHGGVVSLSAFTNFANPMEFICSSIQA-GSRLGYQESAELCAQYLAPV 366
Query: 373 QRAMH--------TFRDTSEKINRYIPSIGNNLQ 398
A+ T+ + + I LQ
Sbjct: 367 LDAIKFNYFPFGLNVASTASTLPKEIAYSEPRLQ 400
>gi|15607313|ref|NP_214686.1| MCE-family protein MCE1D [Mycobacterium tuberculosis H37Rv]
gi|15839550|ref|NP_334587.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31791350|ref|NP_853843.1| MCE-family protein MCE1D [Mycobacterium bovis AF2122/97]
gi|121636084|ref|YP_976307.1| MCE-family protein mce1D [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659936|ref|YP_001281459.1| MCE-family protein Mce1D [Mycobacterium tuberculosis H37Ra]
gi|167970293|ref|ZP_02552570.1| MCE-family protein Mce1D [Mycobacterium tuberculosis H37Ra]
gi|215433092|ref|ZP_03431011.1| MCE-family protein Mce1D [Mycobacterium tuberculosis EAS054]
gi|219555970|ref|ZP_03535046.1| MCE-family protein Mce1D [Mycobacterium tuberculosis T17]
gi|224988557|ref|YP_002643244.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|254233561|ref|ZP_04926887.1| MCE-family protein mce1D [Mycobacterium tuberculosis C]
gi|260185035|ref|ZP_05762509.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
gi|260199175|ref|ZP_05766666.1| MCE-family protein [Mycobacterium tuberculosis T46]
gi|260203317|ref|ZP_05770808.1| MCE-family protein [Mycobacterium tuberculosis K85]
gi|289441547|ref|ZP_06431291.1| MCE-family protein mce1D [Mycobacterium tuberculosis T46]
gi|289445703|ref|ZP_06435447.1| MCE-family protein mce1C [Mycobacterium tuberculosis CPHL_A]
gi|289568071|ref|ZP_06448298.1| MCE-family protein mce1D [Mycobacterium tuberculosis T17]
gi|289572752|ref|ZP_06452979.1| MCE-family protein mce1D [Mycobacterium tuberculosis K85]
gi|289756237|ref|ZP_06515615.1| MCE-family protein mce1d [Mycobacterium tuberculosis EAS054]
gi|306774262|ref|ZP_07412599.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu001]
gi|306779006|ref|ZP_07417343.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu002]
gi|306782794|ref|ZP_07421116.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu003]
gi|306787161|ref|ZP_07425483.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu004]
gi|306791717|ref|ZP_07430019.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu005]
gi|306795761|ref|ZP_07434063.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu006]
gi|306801757|ref|ZP_07438425.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu008]
gi|306805968|ref|ZP_07442636.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu007]
gi|306970364|ref|ZP_07483025.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu009]
gi|306974596|ref|ZP_07487257.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu010]
gi|307082305|ref|ZP_07491475.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu011]
gi|307082649|ref|ZP_07491762.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu012]
gi|2213509|emb|CAB09755.1| MCE-FAMILY PROTEIN MCE1D [Mycobacterium tuberculosis H37Rv]
gi|13879662|gb|AAK44401.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31616935|emb|CAD93042.1| MCE-FAMILY PROTEIN MCE1D [Mycobacterium bovis AF2122/97]
gi|121491731|emb|CAL70193.1| MCE-family protein mce1D [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124603354|gb|EAY61629.1| MCE-family protein mce1D [Mycobacterium tuberculosis C]
gi|148504088|gb|ABQ71897.1| MCE-family protein Mce1D [Mycobacterium tuberculosis H37Ra]
gi|224771670|dbj|BAH24476.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|289414466|gb|EFD11706.1| MCE-family protein mce1D [Mycobacterium tuberculosis T46]
gi|289418661|gb|EFD15862.1| MCE-family protein mce1C [Mycobacterium tuberculosis CPHL_A]
gi|289537183|gb|EFD41761.1| MCE-family protein mce1D [Mycobacterium tuberculosis K85]
gi|289541824|gb|EFD45473.1| MCE-family protein mce1D [Mycobacterium tuberculosis T17]
gi|289696824|gb|EFD64253.1| MCE-family protein mce1d [Mycobacterium tuberculosis EAS054]
gi|308217096|gb|EFO76495.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu001]
gi|308328034|gb|EFP16885.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu002]
gi|308332314|gb|EFP21165.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu003]
gi|308336065|gb|EFP24916.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu004]
gi|308339696|gb|EFP28547.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu005]
gi|308343703|gb|EFP32554.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu006]
gi|308347423|gb|EFP36274.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu007]
gi|308351475|gb|EFP40326.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu008]
gi|308352050|gb|EFP40901.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu009]
gi|308356000|gb|EFP44851.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu010]
gi|308359955|gb|EFP48806.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu011]
gi|308367522|gb|EFP56373.1| MCE-family protein mce1D [Mycobacterium tuberculosis SUMu012]
gi|323717161|gb|EGB26370.1| MCE-family protein mce1D [Mycobacterium tuberculosis CDC1551A]
Length = 530
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/394 (8%), Positives = 108/394 (27%), Gaps = 21/394 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
V+ L + Y ++ + L V+ G+PVG I +
Sbjct: 20 VVIGSLVVVLALAAGIVGVRLYQKLTNNTVVAYFTQANALYVGDKVQIMGLPVGSIDKIE 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + + +A I L I+L + + A
Sbjct: 80 PAGD---KMKVTFHYQNKYKVPANASAVILNPTLVASRNIQLEPPYRGGPVLADNAVIPV 136
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+R + P+ + + + ++ + + + + +A N
Sbjct: 137 ERTQV---PTEWDELRDSVSHIIDELGPTPEQPKGPFGEVIEAFADGLAGKGKQINTTLN 193
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++S ++ + + L + + + E +++
Sbjct: 194 SLSQALNALNEGRGDFFA------VVRSLALFVNALHQDDQQFVALNKNLAEFTDRLTHS 247
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
S+ + + F + + + H +++ ++ + L+ +
Sbjct: 248 DADLSNAIQQFDSLLAVARPFFAKNREVLTHDVNNLATVTTTLLQPDPLDGLETVLHIFP 307
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + I ++ + +++ N + + S++ + +
Sbjct: 308 TLAANINQLYHPTHGGVVSLSAFTNFANPMEFICSSIQA-GSRLGYQESAELCAQYLAPV 366
Query: 373 QRAMH--------TFRDTSEKINRYIPSIGNNLQ 398
A+ T+ + + I LQ
Sbjct: 367 LDAIKFNYFPFGLNVASTASTLPKEIAYSEPRLQ 400
>gi|319957352|ref|YP_004168615.1| mammalian cell entry related domain protein [Nitratifractor
salsuginis DSM 16511]
gi|319419756|gb|ADV46866.1| Mammalian cell entry related domain protein [Nitratifractor
salsuginis DSM 16511]
Length = 541
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/389 (10%), Positives = 102/389 (26%), Gaps = 28/389 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L S V + + G +V L + P T T R +GI
Sbjct: 181 LQIGSPVYYKQLKAGTVVSYHLAPNGRT---VLIDVFIQKPFSDLITDTTRFWNASGIDA 237
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + N E H +
Sbjct: 238 HIGADGVEIRTESLTAILSGG-------------IAFDNFEVFGPGSRVQDGHHFVLYNT 284
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
I++ T ++ + + N F + I
Sbjct: 285 IKEARKVTYTRELYFWVYFNESVRGLKAGAPVEFRGVKVGEVVNLFLVGDVKTANFKIPI 344
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ I + +S + + + G + +L +
Sbjct: 345 LIKIEPERFTITGRERNASKGMDPKVFKALVDKGLRAQLQSANLLTGSLLINLDFHPDAP 404
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L + + + + ++ I + I + ++ +
Sbjct: 405 KANLIKENGLYVFPSVPATIETLKNNVQSILNNLAAIPFK------------EIGEETRQ 452
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
++ + + + +L + + +F ++ N+ + I N + + + L
Sbjct: 453 ILGDVRQKTLPGFDATLQGVNRELLPSFVKLIDQSNQTLEEIRKNYLDTNAQIHRQMLKL 512
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +++ET + N R+P+ ++ GR
Sbjct: 513 MNEIEETSRSIRELSNYLNRHPESLIRGR 541
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 21/54 (38%), Gaps = 3/54 (5%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN---HSLAKALIRPD 90
+ SV GL + V F G+ VG +V LFL + I P+
Sbjct: 298 YFWVYFNESVRGLKAGAPVEFRGVKVGEVVNLFLVGDVKTANFKIPILIKIEPE 351
>gi|223041901|ref|ZP_03612087.1| hypothetical protein AM202_0497 [Actinobacillus minor 202]
gi|223017317|gb|EEF15742.1| hypothetical protein AM202_0497 [Actinobacillus minor 202]
Length = 173
Score = 70.3 bits (169), Expect = 6e-10, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFV+ L F ++ + + ++ GL + ++ G+ VG
Sbjct: 8 EFWVGLFVLLGLIALAFLGLRVANVQGFSSEKTYTLYATFDNIGGLKVRAPIKVGGVVVG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKE 120
R+ + LD + + D + +++ +I+T GL G YI L+
Sbjct: 68 RVSDIQLDPQTYTP-KVTLAVNEDFNKIPDTSSLSIKTAGLLGEQYIALNVGFMM 121
>gi|254550988|ref|ZP_05141435.1| virulence factor mce family protein [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 135
Score = 70.3 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V GL T ++V +G PVG++ + LD L + + D L
Sbjct: 39 FFNQGTRVSAYF-ADAGGLRTGNTVEVSGYPVGKVSSISLDGPG---VLVEFKVDTDVRL 94
Query: 94 YPSTTATIRTQGLAGITY 111
T I+T+GL G +
Sbjct: 95 GNRTEVAIKTKGLLGSKF 112
>gi|288940096|ref|YP_003442336.1| Mammalian cell entry related domain-containing protein
[Allochromatium vinosum DSM 180]
gi|288895468|gb|ADC61304.1| Mammalian cell entry related domain protein [Allochromatium vinosum
DSM 180]
Length = 557
Score = 70.3 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/393 (8%), Positives = 107/393 (27%), Gaps = 18/393 (4%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + I VG+++G L+ + D + P T + ++
Sbjct: 181 LNIGSPVYYRQIQVGQVIGYGLEPDGRAVGIEIFVAAPHDALVTPDTRFWNASGLDVSLS 240
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + ++ + + Y +++ + + + +K
Sbjct: 241 AAGVQVDTQSLLSVVLGGIAFGTPDTLDPAQAHDPYPEVFPLYRNREAAHARIYARKERY 300
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + +I + + + I +
Sbjct: 301 LLLFEGAARGLTSGAPVRLKGIDIGRVLDIQLQLDTEALEFRIPVLIEIEPERIVRRGEA 360
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + V +++E + + DV + ++ +HL+
Sbjct: 361 EAPDERRLVERLVERGLRAQLKLDSVLSGALYVDLDVDSGA-PAGRLVRQGEHLVIPTRP 419
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
T+ + + I T + ++ L + +
Sbjct: 420 GSLEAITTQLASVLEKLDTIPIEQIGRDLSQTAAGANALVNAPELKGAVIELEATLAQVR 479
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
++++ L + + + T E+ + + Q
Sbjct: 480 ATATRLD--------RELGPELTKTLRESTATLERARALLSDRSP--------LYVETQR 523
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+++++ + ER+P+ ++ G+ +G
Sbjct: 524 MLQEVANAARSMRLLTDYLERHPEALLQGKGRG 556
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN---HSLAKALIRPDTPL 93
++ G+ GL++ + VR GI +GR++ + L + I P+ +
Sbjct: 296 RKERYLLLFEGAARGLTSGAPVRLKGIDIGRVLDIQLQLDTEALEFRIPVLIEIEPERIV 355
Query: 94 YPS 96
Sbjct: 356 RRG 358
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/474 (9%), Positives = 108/474 (22%), Gaps = 50/474 (10%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
S+ + V L + L + + ++ S GL+ + V+F
Sbjct: 22 RSRGRLSLVWLIPLVALAVGVWLAV------KTWSERGPIVTIEFKSASGLAAGQTRVKF 75
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIR-----------TQGLA 107
+ +G++ + + + A ++ L T + L
Sbjct: 76 KDVDIGQVKSIDFSPD-LKTVIVSAELKRTFADFLTEHTRFWVERPRVTLSGVSGLDTLV 134
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
YI L + + E+ + + R IQ
Sbjct: 135 SGAYIALDPGQAGRSRRHFTGLEQPPVITTFEDGGRFRLRAPTLGSLNIGSPVYYRQIQV 194
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
A I ++ S S T + S+
Sbjct: 195 GQVIGYGLEPDGRAVGIEIFVAAPHDALVTPDTRFWNASGLDVSLSAAGVQVDTQSLLSV 254
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
A + F ++ + L S
Sbjct: 255 VLGGIAFGTPDTLDPAQAHDPYPEVFPLYRNREAAHARIYARKERYLLLFEGAARGLTSG 314
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
++K + L+ + + + + + + + +
Sbjct: 315 APVRLKGIDIGRVLDIQLQLDTEALEFRIPVLIEIEPERIVRRGEAEAPDERRLVERLVE 374
Query: 348 KFAELMSKINNISALKENNSL-----------------------FKDAQRAMHTFRDTSE 384
+ K++++ + L + E
Sbjct: 375 RGLRAQLKLDSVLSGALYVDLDVDSGAPAGRLVRQGEHLVIPTRPGSLEAITTQLASVLE 434
Query: 385 KINRY-IPSIGNNLQNFSQSG-----LNDIQNLVRKLQETVNHFDDCLNNFERN 432
K++ I IG +L + +++ V +L+ T+ +R
Sbjct: 435 KLDTIPIEQIGRDLSQTAAGANALVNAPELKGAVIELEATLAQVRATATRLDRE 488
>gi|255587510|ref|XP_002534297.1| conserved hypothetical protein [Ricinus communis]
gi|223525556|gb|EEF28089.1| conserved hypothetical protein [Ricinus communis]
Length = 388
Score = 70.3 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 4/115 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S+ WL + G+ T + VR G+ VG +
Sbjct: 106 VGLFLVSGAVLLALSLAWLRGFQLRSKFRKYTAVLEFAQACGICTGTPVRIRGVTVGNV- 164
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ ++ A + D + ++ + GL T I+++
Sbjct: 165 -IQVNP-SLKSIEAVVEVEDDKIIIPRNSLIEVNQSGLLMETLIDITPKDPIPSP 217
>gi|162146734|ref|YP_001601193.1| hypothetical protein GDI_0912 [Gluconacetobacter diazotrophicus PAl
5]
gi|209543279|ref|YP_002275508.1| Mammalian cell entry related domain-containing protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|161785309|emb|CAP54855.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209530956|gb|ACI50893.1| Mammalian cell entry related domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 196
Score = 70.3 bits (169), Expect = 7e-10, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 2/98 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ +DGLS S VR G+ VG++V +D + +RPD L
Sbjct: 42 EDGYRLNAAFAH-IDGLSVGSDVRLAGVTVGQVVAERVDPSSF-KAQVTFTVRPDIHLPT 99
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ A I + L G YI LS + A Q
Sbjct: 100 DSAAIITSDSLLGGKYIALSPGGNDATLHPGAAIAETQ 137
>gi|326333398|ref|ZP_08199644.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948794|gb|EGD40888.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 381
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/382 (8%), Positives = 105/382 (27%), Gaps = 35/382 (9%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +G V+++ ++ D ++ P +V L S +R
Sbjct: 1 MNKYIVPIIIGALVLAVGAWALV----------RDTGEKTLVAHFPRTVS-LYEGSDLRV 49
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++ + + R D L A + + + G Y++++
Sbjct: 50 LGVAVGKVTAVEPNGTD---VKVTMEYREDVDLPADGKAVVISPSIVGDRYVQVTPAYDG 106
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + A T+ P ++ S+ ++ + + + ++ + +
Sbjct: 107 GEKMDDGAVLSTD---KTSVPVELDQIYSSVDDLVVALGPDGANKNGALTDLLQQTAKNL 163
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ + K + S + + +
Sbjct: 164 GGQGEKINSTVGDLGKLTKTLDNRDEQFFDSAEQLEG-----------------FIGTLA 206
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + ++ + + S + ++ + + K+ + D + + ++
Sbjct: 207 ENDQTVRDFAQALAEVSSILEGERQELAASMKNLSVALTKVTQFVRD-NKAILREDIQGL 265
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
++ ++R + N + + E++ +
Sbjct: 266 NRIGKVLVKQRKALDESLRTAPLALNNLGLAYNPETGTLDTNANITMVLDEIVQNPASFL 325
Query: 361 ALKENNSLFKDAQRAMHTFRDT 382
+ + + R
Sbjct: 326 CSLVDQATNGSSAEICTQIRQM 347
>gi|311741979|ref|ZP_07715789.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311314472|gb|EFQ84379.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 397
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 21/131 (16%), Positives = 37/131 (28%), Gaps = 16/131 (12%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +T+ G+ V + + S GL VR
Sbjct: 1 MSLRQ-WTAFGVVVTVAVALFLGV-----------RGNETAVTAYFSSAVGLYPKDEVRV 48
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + I D P+ A I L +I+L+ +
Sbjct: 49 LGVKVGTVTKVEPQGD---VVKVTFSID-DQPIPADAQAAIIAPNLVNGRFIQLAPVYNG 104
Query: 121 KKTIFQIATER 131
T+
Sbjct: 105 GDTLSDGDEIP 115
>gi|254821047|ref|ZP_05226048.1| MCE-family protein Mce2A [Mycobacterium intracellulare ATCC 13950]
Length = 399
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 56/157 (35%), Gaps = 9/157 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSV 58
M + Y +VGL + ++ +Y + P+ ++ + P GL S V
Sbjct: 1 MRERPPYKTVGLVTIVVMALIVLLLY--GQFRGDLTPITQLTMVAPR--AGLVMDPGSKV 56
Query: 59 RFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELS 115
+NG+ +GR+ L + + I P + + A I+ + G Y+ LS
Sbjct: 57 TYNGVQIGRVSSLSEVTHRGKPAAKVVLDITPKYVKRIPANVAADIKATTVFGNKYVALS 116
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + ++ T + S AE
Sbjct: 117 APNHPAAHSITPSIVIDATSVTTEFNTLFETVTSIAE 153
>gi|148821364|ref|YP_001286118.1| MCE-family protein mce1D [Mycobacterium tuberculosis F11]
gi|218755906|ref|ZP_03534702.1| MCE-family protein mce1D [Mycobacterium tuberculosis GM 1503]
gi|253797094|ref|YP_003030095.1| MCE-family protein mce1D [Mycobacterium tuberculosis KZN 1435]
gi|254549111|ref|ZP_05139558.1| MCE-family protein mce1D [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289552424|ref|ZP_06441634.1| MCE-family protein mce1D [Mycobacterium tuberculosis KZN 605]
gi|289764288|ref|ZP_06523666.1| MCE-family protein mce1D [Mycobacterium tuberculosis GM 1503]
gi|297632650|ref|ZP_06950430.1| MCE-family protein mce1D [Mycobacterium tuberculosis KZN 4207]
gi|297729625|ref|ZP_06958743.1| MCE-family protein mce1D [Mycobacterium tuberculosis KZN R506]
gi|313656951|ref|ZP_07813831.1| MCE-family protein mce1D [Mycobacterium tuberculosis KZN V2475]
gi|148719891|gb|ABR04516.1| MCE-family protein mce1D [Mycobacterium tuberculosis F11]
gi|253318597|gb|ACT23200.1| MCE-family protein mce1D [Mycobacterium tuberculosis KZN 1435]
gi|289437056|gb|EFD19549.1| MCE-family protein mce1D [Mycobacterium tuberculosis KZN 605]
gi|289711794|gb|EFD75810.1| MCE-family protein mce1D [Mycobacterium tuberculosis GM 1503]
gi|328456881|gb|AEB02304.1| MCE-family protein mce1D [Mycobacterium tuberculosis KZN 4207]
Length = 530
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 35/394 (8%), Positives = 108/394 (27%), Gaps = 21/394 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
V+ L + Y ++ + L V+ G+PVG I +
Sbjct: 20 VVIGSLVVVLALAAGIVGVRLYQKLTNNTVVAYFTQANALYVGDKVQIMGLPVGSIDKIE 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + + +A I L I+L + + A
Sbjct: 80 PAGD---KMKVTFHYQNKYKVPANASAVILNPTLVASRNIQLEPPYRGGPVLADNAVIPV 136
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+R + P+ + + + ++ + + + + +A N
Sbjct: 137 ERTQV---PTEWDELRDSVSHIIDELGPTPEQPKGPFGEVIEAFADGLAGKGKQINTTLN 193
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++S ++ + + L + + + E +++
Sbjct: 194 SLSQALNALNEGRGDFFA------VVRSLALFVNALHQDDQQFVALNKNLAEFTDRLTHS 247
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
S+ + + F + + + H +++ ++ + L+ +
Sbjct: 248 DADLSNAIQQFDSLLAVVRPFFAKNREVLTHDVNNLATVTTTLLQPDPLDGLETVLHIFP 307
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + I ++ + +++ N + + S++ + +
Sbjct: 308 TLAANINQLYHPTHGGVVSLSAFTNFANPMEFICSSIQA-GSRLGYQESAELCAQYLAPV 366
Query: 373 QRAMH--------TFRDTSEKINRYIPSIGNNLQ 398
A+ T+ + + I LQ
Sbjct: 367 LDAIKFNYFPFGLNVASTASTLPKEIAYSEPRLQ 400
>gi|297834968|ref|XP_002885366.1| hypothetical protein ARALYDRAFT_898445 [Arabidopsis lyrata subsp.
lyrata]
gi|297331206|gb|EFH61625.1| hypothetical protein ARALYDRAFT_898445 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 2/114 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S WL + G+ T + VR G+ VG I+
Sbjct: 99 VGLFIVSGATLLALSWAWLRGFQMRSKFRKYQTVFELSHASGICTGTPVRIRGVTVGTII 158
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ + A+ + ++ + GL T I++ +
Sbjct: 159 RVNPSLKNIEAV-AEIE-DDKIIIPKNSLVEVNQSGLLMETMIDIMPRNPIPEP 210
>gi|54027024|ref|YP_121266.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018532|dbj|BAD59902.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 339
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/285 (14%), Positives = 90/285 (31%), Gaps = 15/285 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMA---EVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
F+ L + + L S+ + GL ++V +GI VG +
Sbjct: 17 FLWLGLAAAATVVLLLVGSSIVKQARVSDKTIHAEFAQ-AAGLRPGATVDVSGIEVGAVR 75
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L + + +R D L + A I+ + G ++EL I
Sbjct: 76 AVRLAGD---KVVVDLRVRRDLRLGANARAAIKMSTILGRLHVELVPGDGNGLPGDTIPL 132
Query: 130 ERNQRAMITATPSGINYFISNAENT--------SKKISDSSRHIQKIIENIEKPLTTTIA 181
E + S+ E + + + + L + A
Sbjct: 133 ENTSVPYNLGKVIQDTQYKSSFERIERIDPEKLRQALDVLDAQMGDSPQLTVAALDSIGA 192
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
E I+ + M + + + +S T + I + + + Q ++
Sbjct: 193 LAEVINDRRDEVDKLLKSMDEVSALVADNQNSVLLLLTRGEAIGNAVAQRQQLLKQLLDN 252
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + ++++ Q+ +HD+ T+ Q+ + +D L
Sbjct: 253 VAALSALLQEMGIENNGQLGPLIHDLNTMTEGLQKNKENLDRLYE 297
>gi|296163931|ref|ZP_06846567.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900712|gb|EFG80082.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 504
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/338 (9%), Positives = 79/338 (23%), Gaps = 13/338 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+V L SI L+ + Y+ ++ + L V+ G+ VG I +
Sbjct: 19 AIIVGSLVILLASITTLAARDFYEKMTNNTVVAYFPEANALYVGDKVQIMGVRVGAIDKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + +A I L I+L + ++ A
Sbjct: 79 EPSGD---KMKVTFHYEKKYKVPADASAVILNPALVASRVIQLEPPYEGGPSLGNHAVIP 135
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+R + P + + + K+ + + + + +A
Sbjct: 136 IERTQV---PVEWDQLRNGITDIISKLGPTPEQPKGPFGEVIESFADGLAGKGKEINSTL 192
Query: 192 NNISHIDKMMHTTQVTPH----SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+S ++ + S D A+ + +
Sbjct: 193 TGLSQALTALNDGRADFFAVLRSMALFVNALYKDDRNFVALNKDLAVFTSSLTSSDPGLA 252
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD---FSSKMKSKETSAFLENI 304
+ + + D R+ + L ++ +
Sbjct: 253 KALQQVDDMLPALRKLLADNRDGLTHDINTLADVTTALVQPEPLNALETALHVFPHFAAN 312
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
A + + I + S +
Sbjct: 313 ALAIYEPAHGALTGAIALPNFANPLQFICSAMQAGSRM 350
>gi|255645879|gb|ACU23429.1| unknown [Glycine max]
Length = 383
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 4/115 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S+ WL G+ T + VR G+ VG +
Sbjct: 101 VGLFLVSSAVLFALSLAWLKGFQMRSKFRKYTATFEFDQACGICTGTPVRIRGVTVGDV- 159
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ ++ A I D T + ++ + GL T I+++
Sbjct: 160 -IRVNP-SLRSIEAIVEIEDDKTIIPRNSLVEVNQSGLLMETIIDITPRDPIPTP 212
>gi|21553847|gb|AAM62940.1| unknown [Arabidopsis thaliana]
Length = 363
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 2/114 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S WL + G+ T + VR G+ VG I+
Sbjct: 81 VGLFIVSGATLLALSWAWLRGFQMRSKFRKYQTVFELSHASGICTGTPVRIRGVTVGTII 140
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ + A+ + ++ + GL T I++ +
Sbjct: 141 RVNPSLKNIEAV-AEIE-DDKIIIPRNSLVEVNQSGLLMETMIDIMPRNPIPEP 192
>gi|42572499|ref|NP_974345.1| TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2); lipid transporter/
phospholipid binding [Arabidopsis thaliana]
Length = 282
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 2/114 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S WL + G+ T + VR G+ VG I+
Sbjct: 99 VGLFIVSGATLLALSWAWLRGFQMRSKFRKYQTVFELSHASGICTGTPVRIRGVTVGTII 158
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ + A+ + ++ + GL T I++ +
Sbjct: 159 RVNPSLKNIEAV-AEIE-DDKIIIPRNSLVEVNQSGLLMETMIDIMPRNPIPEP 210
>gi|18402572|ref|NP_566659.1| TGD2 (TRIGALACTOSYLDIACYLGLYCEROL2); lipid transporter/
phospholipid binding [Arabidopsis thaliana]
gi|75274119|sp|Q9LTR2|TGD2_ARATH RecName: Full=Protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic;
AltName: Full=ABC transporter I family member 15;
Short=ABC transporter ABCI.15; Short=AtABCI15; Flags:
Precursor
gi|9294549|dbj|BAB02812.1| unnamed protein product [Arabidopsis thaliana]
gi|15081676|gb|AAK82493.1| AT3g20320/MQC12_7 [Arabidopsis thaliana]
gi|20334840|gb|AAM16176.1| AT3g20320/MQC12_7 [Arabidopsis thaliana]
Length = 381
Score = 70.0 bits (168), Expect = 7e-10, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 38/114 (33%), Gaps = 2/114 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S WL + G+ T + VR G+ VG I+
Sbjct: 99 VGLFIVSGATLLALSWAWLRGFQMRSKFRKYQTVFELSHASGICTGTPVRIRGVTVGTII 158
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ + A+ + ++ + GL T I++ +
Sbjct: 159 RVNPSLKNIEAV-AEIE-DDKIIIPRNSLVEVNQSGLLMETMIDIMPRNPIPEP 210
>gi|302036849|ref|YP_003797171.1| hypothetical protein NIDE1505 [Candidatus Nitrospira defluvii]
gi|190343263|gb|ACE75651.1| conserved protein of unknown function [Candidatus Nitrospira
defluvii]
gi|300604913|emb|CBK41246.1| conserved protein of unknown function, putative ABC transporter,
periplasmic binding component [Candidatus Nitrospira
defluvii]
Length = 329
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 2/124 (1%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG FV+ + + +W+S++ P V+ + S GL + V +GI VGR+
Sbjct: 15 IVGTFVLIPVLILAVAGFWMSKTEHLFEPKYHVMASLSKSY-GLEPGAPVVVSGIRVGRV 73
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI-RTQGLAGITYIELSTLRKEKKTIFQI 127
+ L+ + R + ++ I ++ + G T +E+ +
Sbjct: 74 KQVDLNDRGTVDLTLQLSTRYQDMVKGNSELHITKSGVVVGQTQVEIGAGTASSPVLTDG 133
Query: 128 ATER 131
AT R
Sbjct: 134 ATIR 137
>gi|324999475|ref|ZP_08120587.1| Mce family protein [Pseudonocardia sp. P1]
Length = 419
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 73/287 (25%), Gaps = 11/287 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ + +L + I +S + SV + VR G+ VG+I
Sbjct: 17 RILALALVVLVGAAAVILVVSSDTRQGT-------AYFASVKSIYPGDRVRIQGVDVGQI 69
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + D P+ A I + L Y++L+ K +
Sbjct: 70 DDIQPEGDT---VRIDFSWDGDYPVPAEAMAGIVSPTLVATRYLQLAPAYKGGPQLEDGG 126
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+R + + T ++ ++ N E +
Sbjct: 127 VIPVERTASPVEYDDLKEQVKRVGETLGPDGLDAQGALSRFVDVAAANAE-GGNGEKFNE 185
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ + + + + + + F + + ++
Sbjct: 186 MIKQASAAVQTLADGREDLFGTVRNLQVFVAGLGAVDGQIAEFNNRLSSVSGVLADSSDD 245
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ V ET E ++ + + +S
Sbjct: 246 LGAALAGIDRAAGDVEAFVDETGGPLTESVDRLGSVTRNLASSRDEL 292
>gi|167970509|ref|ZP_02552786.1| MCE-family protein mce3D [Mycobacterium tuberculosis H37Ra]
gi|215404237|ref|ZP_03416418.1| MCE-family protein mce3D [Mycobacterium tuberculosis 02_1987]
gi|215411651|ref|ZP_03420447.1| MCE-family protein mce3D [Mycobacterium tuberculosis 94_M4241A]
gi|215430879|ref|ZP_03428798.1| MCE-family protein mce3D [Mycobacterium tuberculosis EAS054]
gi|218753681|ref|ZP_03532477.1| MCE-family protein mce3D [Mycobacterium tuberculosis GM 1503]
gi|219557923|ref|ZP_03536999.1| MCE-family protein mce3D [Mycobacterium tuberculosis T17]
gi|253798983|ref|YP_003031984.1| MCE-family protein mce3D [Mycobacterium tuberculosis KZN 1435]
gi|254550990|ref|ZP_05141437.1| MCE-family protein mce3D [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186940|ref|ZP_05764414.1| MCE-family protein mce3D [Mycobacterium tuberculosis CPHL_A]
gi|260201062|ref|ZP_05768553.1| MCE-family protein mce3D [Mycobacterium tuberculosis T46]
gi|294996891|ref|ZP_06802582.1| MCE-family protein mce3D [Mycobacterium tuberculosis 210]
gi|297634538|ref|ZP_06952318.1| MCE-family protein mce3D [Mycobacterium tuberculosis KZN 4207]
gi|297731526|ref|ZP_06960644.1| MCE-family protein mce3D [Mycobacterium tuberculosis KZN R506]
gi|308373287|ref|ZP_07431726.2| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu005]
gi|308380237|ref|ZP_07489191.2| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu011]
gi|313658859|ref|ZP_07815739.1| MCE-family protein mce3D [Mycobacterium tuberculosis KZN V2475]
gi|253320486|gb|ACT25089.1| MCE-family protein mce3D [Mycobacterium tuberculosis KZN 1435]
gi|308338101|gb|EFP26952.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu005]
gi|308362120|gb|EFP50971.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu011]
Length = 413
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/339 (8%), Positives = 86/339 (25%), Gaps = 11/339 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++ + R+ ++ + +G+ V G+PVG+IV +
Sbjct: 1 MLATALVLVAGVILAMRTADAAARTT--VVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEP 58
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + A I + L I+L+ T+ +
Sbjct: 59 QP---LRAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQE 115
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKPLTTTIANIETIST 188
R ++ + + + +N+ T I +S
Sbjct: 116 RTVVPVEWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTIIKLSQ 175
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H + T + + + + + + ++ ++I + +
Sbjct: 176 AISALGDHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIGQAAED 235
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADS 307
+ + + + + D L + S NI +
Sbjct: 236 LNAVVADVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEP 295
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + A + + + I +
Sbjct: 296 ANGALTGALAGNNMANPIAFLCGAIQAASRLGGEQAAKL 334
>gi|111019740|ref|YP_702712.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110819270|gb|ABG94554.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 389
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 44/322 (13%), Positives = 95/322 (29%), Gaps = 10/322 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
S+ GL V G+PVG + + + + D P+
Sbjct: 40 STLHFTAYFRNSI-GLYEGDRVTIRGVPVGTVDAIDPMGD---RVRVTLTVTGDHPVPAD 95
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATER-NQRAMITATPSGINYFISNAENTS 155
A I L Y++L+ + A ++ A+ +
Sbjct: 96 AGAAIIAPTLVTGRYVQLAPTYDGGARLEDGAEIPLDKTAVPVEYDQLKKQLTELSTELG 155
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + + +++ + L +++ + ++ + + T +
Sbjct: 156 PQGYNVDGSLSELVASTGTALDGNGQSLKLALSNVSAAMQTLSDGGPDLFSTVRNLQVLV 215
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ +D +N + + + ++ V D E T
Sbjct: 216 SALAASDQQIVGFSGELRSVSTLLNNNRTELDAALASIAALLPEIRGYVDDNNEALTTDV 275
Query: 276 EVGQKIDHLLSDFSS-----KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
E I LL + + A L NI D SN + AI ++ D I +
Sbjct: 276 ESLNSIATLLMNKQDDLAQILHVTPTALADLYNIYDPASNSLTGALAIPDLPDPMSFICA 335
Query: 331 TINTIENITSNLNDSSQKFAEL 352
+ T++ + S KF ++
Sbjct: 336 LLTTVDAPQEECSRMSDKFGDM 357
>gi|296179485|gb|ADG96490.1| MceD [Gordonia cholesterolivorans]
Length = 373
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 30/356 (8%), Positives = 103/356 (28%), Gaps = 18/356 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G+ + ++ ++ L+ S ++ GL V+ G+ +G +
Sbjct: 6 RLGVPALIVIGIVVTAMVALTVSVVWERTHTARATLHFTDATGLFPGDPVKMRGVAIGTV 65
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT----- 123
+ + + S A I + L Y++
Sbjct: 66 ESVAPAPSD---VTVEVSYDDSVFVSASARAAIVSPTLVSGRYVQFVNPEPLDPEASRGA 122
Query: 124 ---------IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + A + A++ +S ++ + +
Sbjct: 123 ALADGAVVGLTRTAVPVGYDEIKKQVTDLAAQLGPTADDQKGTLSRFVDTSASVLGDNGQ 182
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
L + + ++ LA + + Q + + + + +
Sbjct: 183 SLRHAVDALSDAASTLAAGGPDLFGTVRNLQKVVTALRASDDQIVSFSAQLNDASALLDD 242
Query: 235 DLQKVNQILENIQVSSNNFVK-SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ +++ + + + + S+ DV+E T+ + + + D L +
Sbjct: 243 NRTQLDAAVGALNGMVPDLREYLSENRDALSSDVKELTRVSRLLVDREDDLAQILHTAPT 302
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ + + ++ +I+ + +++T++ + +N + +
Sbjct: 303 ALSNLYNIYDPDSNSLTGGLAIADFPDPVSLICALLTTVDAPKKECQKVNTTLTRV 358
>gi|226364212|ref|YP_002781994.1| Mce family protein [Rhodococcus opacus B4]
gi|226242701|dbj|BAH53049.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 471
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/359 (9%), Positives = 99/359 (27%), Gaps = 7/359 (1%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + +F + + ++ + EV +R+P S GL + ++V
Sbjct: 1 MRMTRFVRIQLIIFSILTVIGLVVMSIQYVKVPVLFGVGRYEVGVRLP-STGGLYSHANV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G +G + + L + AK + D + A +++ G Y++L R
Sbjct: 60 AYRGTNIGVVENVTLTGDG---VEAKMSLDSDYKIPADVDAAVKSVSAVGEQYVDLIP-R 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + S S +Q +I+
Sbjct: 116 DGAADADGPYLANGDVIPEDRATIPQDVGEMLDQADELLASISDTRLQTVIDEAFTAFNG 175
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ +++ + + D T+ T++ +
Sbjct: 176 SGPDLQRLIDSARLFVEEADANSDATKALIDQVGPLLDTQTVSSDAIRSWTQDLVTFTDQ 235
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ +++ ++ + D++ T + + ++ ++
Sbjct: 236 LRASDPSLRSVLEKGPGAAQEATQLFQDLQPTLPILLRNLVSVGQVGVIYNKSIEQVLVI 295
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
A T+ + + Q T + S + + + +
Sbjct: 296 YPPLTAALVTAATGGPVEDGAIVDFALQLHDPPACTTGFLPPEQRRSGDQTDPIATPND 354
>gi|41408289|ref|NP_961125.1| hypothetical protein MAP2191 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396645|gb|AAS04508.1| hypothetical protein MAP_2191 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 359
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 36/287 (12%), Positives = 86/287 (29%), Gaps = 7/287 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G ++ R + GL + V +G+
Sbjct: 12 ANLIRPGFIGTVLILLVVAVGLAPDRLVTWAT-TIRYEALFSE-AGGLLPGNKVLVSGVN 69
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + + LD + ++L + L +TA IRT L G + L +
Sbjct: 70 VGTVSRVSLDDD--GNALVDFGVNGKVRLGSLSTAHIRTGSLLGARVLTLESAGAGLLRP 127
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
++ + + T + + + + ++ ++ S + I+ I L T +
Sbjct: 128 SEVIPLSRTSSPYSLTEAVSDMTTNLSTTSTDTLNQSLDALSATIDQIAPQLGPTFDGVT 187
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+S + + +D ++ + + L ++ ++++L
Sbjct: 188 RLSRAINSRGESLDALLKSATDVTGILSEHSQGVNSLILDGNVLLETLVRRRDAISELLA 247
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
N+ S V + + T V ++ + S
Sbjct: 248 NVSAVSKQLT---GLVADNESKLGPTLDRLNSVAAMLEKNRDNLSKA 291
>gi|41408290|ref|NP_961126.1| hypothetical protein MAP2192 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396646|gb|AAS04509.1| hypothetical protein MAP_2192 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 444
Score = 70.0 bits (168), Expect = 8e-10, Method: Composition-based stats.
Identities = 34/342 (9%), Positives = 87/342 (25%), Gaps = 13/342 (3%)
Query: 15 VSILFFSFFSIYWLSRS--NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
+ + + S Q + P S G+ +R +G+ VG + +
Sbjct: 7 LLVTALLVGLLVGASGFLVRQTFFRPLTITAYFP-SATGIYAGDEIRVSGVKVGTVASVQ 65
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE--KKTIFQIATE 130
+ + + + A I Q L Y++L+ + A
Sbjct: 66 PQP---SRARLILHVDRHVSIPADAKAIIVAQNLVSARYVQLTPAYHRGGGPKMLDGAVI 122
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
R A P + + + +S + +
Sbjct: 123 DTDRT---AIPVEWDQVTEQLTRLATDLGPASDVSSTSVSRFITTAANALDGNGEKLRQT 179
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
+S I +++ + D + ++ I + S
Sbjct: 180 LGQLSGISRILANGS--GNIVDIIKNLQKFVTTLRDSNQQIVQFQNRLTTLSSVLDDSRS 237
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
+ S+ + R T + ++I L + + + + + A + +
Sbjct: 238 DLDAALSNLSVAVGEVQRFVAGTRDKTAEQIQRLTTVTQVLVDHRMDVENILHAAPTAFS 297
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+I II+ ++ + + +
Sbjct: 298 NGYNIYNPNTPGAMGSFIINNLSNPVHFFCDAIGAVANVTAA 339
>gi|296171125|ref|ZP_06852577.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894315|gb|EFG74069.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 427
Score = 70.0 bits (168), Expect = 9e-10, Method: Composition-based stats.
Identities = 29/325 (8%), Positives = 84/325 (25%), Gaps = 9/325 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ V+ S +G+ VR G+ VG I +
Sbjct: 28 SSTASRRTTVVAYFTNS-NGIFVGDEVRILGVAVGHIKQIQPQP---RRVKITFWYESRY 83
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ A I + L I+L+ + A R A P + +
Sbjct: 84 QVPADAKAVILSPSLVTARAIQLTPAYTGGPQLHDGAVIPQART---AVPVEWDDLRQDL 140
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
E ++ + + + + + +I + + + +
Sbjct: 141 EKLTEMLQPTHGGLSPLGSLVTTAANNLRGQGASIRDTIVKLSQAVSALSDHGNDLFSTV 200
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + + L + + + + + +D V + V +
Sbjct: 201 KNLSILVSALQSSGDLMQQLNQNLASVTALLTNDPNEVAGAVTALADVVGDVRTFVADNR 260
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ ++ + + ++ + L N + + +
Sbjct: 261 EALGTSSDRLASVSTALNASLDD--IKQALHIAPTELQNFMNIYQPAQGTLSGAPAFANF 318
Query: 332 INTIENITSNLNDSSQKFAELMSKI 356
N + + + +S+ + +K+
Sbjct: 319 ANPVAFLCGAIQAASRLGWDQSAKL 343
>gi|269128025|ref|YP_003301395.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268312983|gb|ACY99357.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 341
Score = 69.6 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 3/130 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
V L VS++ + + + + + EV + G+ VR G+
Sbjct: 9 VNQRVVALVSVSVIGAACVFAFAVGQLHLL-ERGYEVSGVFTDT-GGIKEGDDVRVAGVK 66
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
GR++ + D H + + L T A I+T L G Y++LS
Sbjct: 67 AGRVLRIEPDF-GKGHVVITWRVNSGVELGLQTRADIQTATLLGGRYLKLSGPVPADGPF 125
Query: 125 FQIATERNQR 134
+ +R
Sbjct: 126 LHQLPKSRRR 135
>gi|196232810|ref|ZP_03131660.1| Mammalian cell entry related domain protein [Chthoniobacter flavus
Ellin428]
gi|196223009|gb|EDY17529.1| Mammalian cell entry related domain protein [Chthoniobacter flavus
Ellin428]
Length = 328
Score = 69.6 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 44/145 (30%), Gaps = 13/145 (8%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ V L V+ ++ + + I P V G+ S VR+
Sbjct: 1 MKKNLSDYIVALVVILCSLVLLGALTYALSGRHGKSSDRTLEIDYPD-VTGIKLHSQVRY 59
Query: 61 NGIPVGRIVGLFL-----------DQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAG 108
G G + + L +++ N + D P+ A++ + L
Sbjct: 60 AGADAGTVTNIRLLTFAEREAAETEEQKKNAVRVTITLLKDVPPIPSDVRASLAAETLLS 119
Query: 109 ITYIELSTLRKEKKTIFQIATERNQ 133
++ LS + A +
Sbjct: 120 EKFVALSAGTPTAPKLANGAILQGH 144
>gi|326383092|ref|ZP_08204781.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198228|gb|EGD55413.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 474
Score = 69.6 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 33/282 (11%), Positives = 88/282 (31%), Gaps = 13/282 (4%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ + + +F + + + R Q G + GL +++V
Sbjct: 1 MKITHFVRVQLIIFSIVTVISMVAMAVFYIRLPQMFGIGTYNVTLEMPVTGGLYENANVS 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VG++ G+ L A I T + ++ A++R+ G ++E + +
Sbjct: 61 YRGVDVGKVTGVQLTPTG---VSASLTIDSGTDIPANSAASVRSVSAVGEQFVEFTPPKD 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
P I+ + A+ ++SD+ K+ +++ T
Sbjct: 118 PSSD----NIGDGATVQTDDVPVEISSMLDQADALLNQVSDT-----KLRSVMDEAFTAF 168
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
E + ++ + + + ++ T D + +
Sbjct: 169 NGTGEELQRLMDSMVLFVGELNKNVDTTIALVDQAGPILATQNRTADQIRSWTKDLTTVT 228
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+Q+ + ++ K + ++F +
Sbjct: 229 DQLRASRPDITDVLAKGPGVASQAQKLFEDMNESFPLAISNL 270
>gi|260575569|ref|ZP_05843567.1| Mammalian cell entry related domain protein [Rhodobacter sp. SW2]
gi|259022212|gb|EEW25510.1| Mammalian cell entry related domain protein [Rhodobacter sp. SW2]
Length = 163
Score = 69.6 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 42/112 (37%), Gaps = 4/112 (3%)
Query: 24 SIYWLSRSNQYDGP--MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
+ + + + G + SV+G++ S V+ G+ VG I L L+ + +
Sbjct: 21 FVIYAGQGTGFGGDVGRYPLKASF-RSVEGITVGSDVKLAGVKVGSITDLQLNPQTY-FA 78
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
A+ + L + I ++GL G +IE+ E Q
Sbjct: 79 DAEISMLDGVLLPDDSAILISSEGLLGGNFIEVIPGGSPINLEPGQEIEDTQ 130
>gi|46581529|ref|YP_012337.1| paraquat-inducible protein B [Desulfovibrio vulgaris str.
Hildenborough]
gi|46450951|gb|AAS97597.1| paraquat-inducible protein B [Desulfovibrio vulgaris str.
Hildenborough]
gi|311235176|gb|ADP88030.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
RCH1]
Length = 543
Score = 69.6 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/393 (9%), Positives = 106/393 (26%), Gaps = 30/393 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LS V + I VG++V D + + T + +T + +T
Sbjct: 176 LSIGMPVYYRQIQVGQVVSYGFDDDGNSVAVQIFIEAPHHTKITENTRFWNASGLDMSLT 235
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
L + +I + + + I+ + +K
Sbjct: 236 AQGLKIDTQSLTSIVSGGLAFDVPEGTPPGKEADENTVFDLYPDHDSINRQTYSFRKDWL 295
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + V + L +
Sbjct: 296 IYFDQSVRGLSVGAPVELYGIKIGEVRKIDLIYDMVRKDIRVPVIVSIEPERISDMLKAV 355
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + ++ + + ++ LL DF
Sbjct: 356 PNPESTKGEPILKWFVEDRNMRAQLKTGNLLTG-------------------QLLVDFGF 396
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + EN ++ S+ I++ + + + + I + ++ ++
Sbjct: 397 HPREPKVKLAFENGYAVVPSIPGSLEQIQDSIAHITRNLEKVP-FDKIGTRIDTLLKETT 455
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
++ + + N Q + + T E + + + + Q
Sbjct: 456 VVVKESGRFANRLN-NETTPLLQSNLIALQKTLEDLQGTLGKN--------SAFNYNTQK 506
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ +L +T+ + +R+PQ +++G+ +
Sbjct: 507 TLEELTQTLRALRELTTAIDRHPQSLLFGKGEP 539
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPD 90
I SV GLS + V GI +G + + L + I P+
Sbjct: 296 IYFDQSVRGLSVGAPVELYGIKIGEVRKIDLIYDMVRKDIRVPVIVSIEPE 346
>gi|120601308|ref|YP_965708.1| hypothetical protein Dvul_0257 [Desulfovibrio vulgaris DP4]
gi|120561537|gb|ABM27281.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
DP4]
Length = 543
Score = 69.6 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 37/393 (9%), Positives = 106/393 (26%), Gaps = 30/393 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LS V + I VG++V D + + T + +T + +T
Sbjct: 176 LSIGMPVYYRQIQVGQVVSYGFDDDGNSVAVQIFIEAPHHTKITENTRFWNASGLDMSLT 235
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
L + +I + + + I+ + +K
Sbjct: 236 AQGLKIDTQSLTSIVSGGLAFDVPEGTPPGKEADENTVFDLYPDHDSINRQTYSFRKDWL 295
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + V + L +
Sbjct: 296 IYFDQSVRGLSVGAPVELYGIKIGEVRKIDLIYDMVRKDIRVPVIVSIEPERISDMLKAV 355
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + ++ + + ++ LL DF
Sbjct: 356 PNPESTKGEPILKWFVEDRNMRAQLKTGNLLTG-------------------QLLVDFGF 396
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + EN ++ S+ I++ + + + + I + ++ ++
Sbjct: 397 HPREPKVKLAFENGYAVVPSIPGSLEQIQDSIAHITRNLEKVP-FDKIGTRIDTLLKETT 455
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
++ + + N Q + + T E + + + + Q
Sbjct: 456 VVVKESGRFANRLN-NETTPLLQSNLIALQKTLEDLQGTLGKN--------SAFNYNTQK 506
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ +L +T+ + +R+PQ +++G+ +
Sbjct: 507 TLEELTQTLRALRELTTAIDRHPQSLLFGKGEP 539
Score = 56.5 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPD 90
I SV GLS + V GI +G + + L + I P+
Sbjct: 296 IYFDQSVRGLSVGAPVELYGIKIGEVRKIDLIYDMVRKDIRVPVIVSIEPE 346
>gi|251771002|gb|EES51586.1| putative ABC transporter [Leptospirillum ferrodiazotrophum]
Length = 312
Score = 69.6 bits (167), Expect = 9e-10, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 47/142 (33%), Gaps = 6/142 (4%)
Query: 4 KNYYTSV----GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
+ + G+F++ L F +Y + + + + G+ + V+
Sbjct: 17 RANEKKIEQLAGIFLLVPLIGFIFGLYEIGVHQHVFDKRFHLYTILDQTY-GIVPGTPVK 75
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI-RTQGLAGITYIELSTLR 118
G+ VG + + + K L + + + ++ ++ ++G + +S
Sbjct: 76 LAGLDVGEVDSVDFTKLNQIKVSMKILKKYQNLIRKDSFVSVKKSGIISGDVSLRISIGT 135
Query: 119 KEKKTIFQIATERNQRAMITAT 140
I A R + +
Sbjct: 136 PWLPEIASNAKIRAETPLTMEQ 157
>gi|169628100|ref|YP_001701749.1| putative MCE family protein [Mycobacterium abscessus ATCC 19977]
gi|169240067|emb|CAM61095.1| Putative MCE family protein [Mycobacterium abscessus]
Length = 416
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/123 (17%), Positives = 43/123 (34%), Gaps = 4/123 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+ + ++L + + + V +++P S GL + V G+ +G +
Sbjct: 25 GIALAAVLLIAIGYLTVGALRVSPFSGTYRVKVQLPES-GGLLPNQDVALRGVKIGTVQS 83
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
L + Q+ A A I+ + S + AG YI + + + A
Sbjct: 84 LDITQQG---VDAVAEIQSKYKIPVSAKVRVTGLSPAGEQYINFEGVSDQGPFLKDGAVI 140
Query: 131 RNQ 133
Sbjct: 141 SQG 143
>gi|118618289|ref|YP_906621.1| MCE-family protein Mce3F [Mycobacterium ulcerans Agy99]
gi|118570399|gb|ABL05150.1| MCE-family protein Mce3F [Mycobacterium ulcerans Agy99]
Length = 487
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/122 (18%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSN--QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+F V L + ++ + V + + S GL T +V + G VGR+
Sbjct: 13 IFAVIALSVLAITFLHFAKLPAMLFGVGRYTVTMELTKS-GGLYTSGNVTYRGSEVGRVE 71
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L +A ++ + A + +Q G TY+EL +
Sbjct: 72 SVQL---TDTGVVAVLSLKSGIDIPSDLKAEVHSQTAIGETYVELLPRNATSPPLKDGDV 128
Query: 130 ER 131
R
Sbjct: 129 IR 130
>gi|297191130|ref|ZP_06908528.1| MCE family protein [Streptomyces pristinaespiralis ATCC 25486]
gi|297150774|gb|EFH30782.1| MCE family protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 337
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 58/170 (34%), Gaps = 4/170 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G GL VR G+ VG++ + LD +H ++ D
Sbjct: 48 GSGDTYSAAFSE-AGGLKPGDEVRIAGVKVGKVDEVDLDG---SHVKVVFRVKGDPKFGT 103
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
T A IR + + G Y+ L + + + ++ + +
Sbjct: 104 RTGAAIRIKTILGAKYLALQPKGSGQLRPGSEIPLERTTPAYDVVQAFSDLTTTSEKVDT 163
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
++++ + I E+ + + +I + IS +A+ + +++
Sbjct: 164 EQLAKALDTISTTFEDSPEEVRASIKGLSAISKTVASRDEDLRELLKHAD 213
>gi|294508533|ref|YP_003572592.1| Conserved hypothetical protein containing mce domain [Salinibacter
ruber M8]
gi|294344862|emb|CBH25640.1| Conserved hypothetical protein containing mce domain [Salinibacter
ruber M8]
Length = 310
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 2/96 (2%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
G V GL+ + VR G+ VG + + L+QE A+ I +
Sbjct: 32 LFGDTYAVKAEFEE-ASGLTAGNPVRMKGVNVGSVESIRLNQET-QTVRARLRIEEGIRI 89
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ A + G I + +E + AT
Sbjct: 90 PEGSHAKVAGFSGIGGVRISILPGPRENPPLPPDAT 125
>gi|118619130|ref|YP_907462.1| MCE-family protein Mce3D_1 [Mycobacterium ulcerans Agy99]
gi|118571240|gb|ABL05991.1| MCE-family protein Mce3D_1 [Mycobacterium ulcerans Agy99]
Length = 443
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/311 (10%), Positives = 83/311 (26%), Gaps = 9/311 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ + +G+ T VR G+PVG+I + E + A I
Sbjct: 36 VVAYFENSNGVFTGDEVRILGVPVGKITSIEPQPES---VRVSFWYDSKYIVPADAKAAI 92
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ L I+L+ + A QR + + ++ +
Sbjct: 93 LSPTLVTSRAIQLTPAYTGGPAMSDNAVIPRQRTAVPVEWDDVRAQLAKLTKELQPTEPG 152
Query: 162 SRHI-----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+N+ + +S + H + T + +
Sbjct: 153 GVSPLGSVINTAADNLRGEGANIRDTVIKLSQAFSALGDHSTDIFSTVKNLAILVSALQD 212
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + + + N++ ++ + + V + + T+
Sbjct: 213 STNLMRQLNQNLATVTGLLANDPNEVANAVRNLGDTVGEVQRFVADNREALGTTSDKLAG 272
Query: 277 VGQKIDHLLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
V Q ++ L D + T NI S++ + + + I
Sbjct: 273 VSQALNDSLDDVKQFLHVAPNTLQNYVNIWQPAQGAVSAVPMLNNFANPISFLCGAIQAA 332
Query: 336 ENITSNLNDSS 346
+ +
Sbjct: 333 SRLGYEQSAKL 343
>gi|134103289|ref|YP_001108950.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915912|emb|CAM06025.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 326
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/257 (13%), Positives = 86/257 (33%), Gaps = 8/257 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G+ D+ VR G+ VG + + LD + H ++ D L
Sbjct: 35 FVGGKTYQAHFTE-AAGIKPDAEVRVAGVKVGSVSDVELDGD---HVTVSFRVK-DAWLG 89
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
TTA I+ + L G Y+ L ++ + + + + + + +
Sbjct: 90 DHTTAAIKIKTLLGQKYLALDPQGSQEMSTSDPIPVQRTMSPYDVIEAFSDLSNTVGQID 149
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+K+++DS R + +T + + +S +A+ +++++ T + +
Sbjct: 150 TKQLADSFRVMSDTFSGTPDEVTGALNGLSALSRTIASRDEQLEQLLTNTSNVSKTVADR 209
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
N +L + + +L+ + S V + + T +
Sbjct: 210 NAEFERLLADGNLLLEEIRHRRESIASLLDGTRELSAQLS---GLVDDNAAQLGPTLEQL 266
Query: 275 QEVGQKIDHLLSDFSSK 291
V + + + +
Sbjct: 267 DRVTKLLQRNQDNLDAS 283
>gi|117620228|ref|YP_858243.1| paraquat-inducible protein B [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561635|gb|ABK38583.1| paraquat-inducible protein B [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 548
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/400 (5%), Positives = 93/400 (23%), Gaps = 28/400 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L S + + G +G++ E D + ++ + ++
Sbjct: 172 LGVGSPINYQGFTIGQVEEAKFLPEKSEMQYQIFINAPYDVLVSSNSRFWMTPGFEVSMS 231
Query: 111 YIELSTLRKEKKTIFQIATERN-QRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ +++ P + ++ + ++ S +
Sbjct: 232 SEGMKVKMDSLESLLDGGITMGLPPGWAPGEPVKQMDDFTLFQDQASVLAGSLDQFIDYV 291
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
E + + + + + ++ +
Sbjct: 292 FLFEDSVGGLHPGAAVEYRGIRVGTVISAPYLIDEKGVQMFQSRQIPVLARIEVQRLSHR 351
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
N + + ++ ++ ++
Sbjct: 352 Y-------------ANAEKEQWRALFGRQFKEGLRATLKTSSLLTGGKVVDLNFYPDAPR 398
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ + + ++ I + + + L + +
Sbjct: 399 FQPTKLAGYQVFPTVQAGLDQIERKVNQILDKFVDMDTAKTLNQVNHTLV-TLEQTLKNV 457
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ + + ++ + L ++ + T ++ + + D++
Sbjct: 458 SAVSANLDKFTGQSATQQLPASLNDSLKQLQSTLQEYDA------------NSQTNQDLR 505
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
V+ L + + +++ P +++ R + K
Sbjct: 506 QSVQSLNQLMRELQPLVHSLNEQPSSLIFDRARPRDPEPK 545
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 90/264 (34%), Gaps = 12/264 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ + SV GL ++V + GI VG ++ + + P+
Sbjct: 286 QFIDYVFLFEDSVGGLHPGAAVEYRGIRVGTVISAPYLIDEKG---VQMFQSRQIPV--- 339
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A I Q L ++ + +++ + +F + RA + S + +
Sbjct: 340 -LARIEVQRL---SHRYANAEKEQWRALFGRQFKEGLRATLKT--SSLLTGGKVVDLNFY 393
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + + + + + IE + + +D QV + T
Sbjct: 394 PDAPRFQPTKLAGYQVFPTVQAGLDQIERKVNQILDKFVDMDTAKTLNQVNHTLVTLEQT 453
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
++ + +LDK Q++ L + + ++ D T D+R++ Q+ +
Sbjct: 454 LKNVSAVSANLDKFTGQSATQQLPASLNDSLKQLQSTLQEYDANSQTNQDLRQSVQSLNQ 513
Query: 277 VGQKIDHLLSDFSSKMKSKETSAF 300
+ +++ L+ + + S
Sbjct: 514 LMRELQPLVHSLNEQPSSLIFDRA 537
>gi|315441809|ref|YP_004074688.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260112|gb|ADT96853.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 543
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/330 (9%), Positives = 84/330 (25%), Gaps = 9/330 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ +G V+ ++ F L + V+ ++ + V+ G+
Sbjct: 16 SRALIIGTIVLVLVVVGAFLGMKLYKQMT----TKTVVAYFTQTLA-IYPGDKVQIMGVQ 70
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG I + + + + TA+I L I+LS T+
Sbjct: 71 VGAIDKIEPAGD---KMKVTFHYEDKYKVPENATASILNPSLVASRTIQLSPAYTGGNTL 127
Query: 125 FQIAT-ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
A + ++ + + + IIE+ +
Sbjct: 128 PDNAVLDIDRTQVPVEYDDLRDSISRLLTDLGPTPEQPKGPFGDIIESAADGFAGKGKQL 187
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ L+ + +++ S + +D A
Sbjct: 188 NSTLNNLSEALFALNEGRGDFFSVVKSLATFVNALHQSDQQFVALNNDLAQFTNAFTDSD 247
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + + + + + E + ++ + + + N
Sbjct: 248 REVANALQDLDELLTTTRGFIDENGEVLAHDVQNLAEVTNAILQPEPLDGLETALHAYPN 307
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTIN 333
+A + N+ S + + +
Sbjct: 308 VAANLMNISSPNAGGIVTMPVISNFANPMQ 337
>gi|254224891|ref|ZP_04918506.1| paraquat-inducible protein B [Vibrio cholerae V51]
gi|125622579|gb|EAZ50898.1| paraquat-inducible protein B [Vibrio cholerae V51]
Length = 547
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/400 (9%), Positives = 90/400 (22%), Gaps = 37/400 (9%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ L+ V + G VGR+ D E +
Sbjct: 167 VLTNKEAGKLNVGDPVMYEGFTVGRVESAQFDVESKKA---------------------Q 205
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
Q Y +L R I + + +
Sbjct: 206 YQLFIFAPYDKLVNTRSFFWLNSGINL-----------QLNAEGLEFSLGSIESLLKGGV 254
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
Q E+ +P+T + V D + + S +
Sbjct: 255 TFGQLQEEDSGQPITQQLTEFRLFDDVKQIREGMFDDYIEFVMMFDESVRGLKPSAPVEY 314
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + K + + I + ++ N + + +
Sbjct: 315 RGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIELGRLYNNFNKADLPALKSRMQQEFFK 374
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTS-NMRSSISAIREITDQRQKIISTINTIENITSN 341
L + + + + ++ + +
Sbjct: 375 GLKASLKTGNLVTGALYIDTDYYPEEKIDGLKHFDGYPLFPTKQGGFAEVQKQVTELLRK 434
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
LN + + +N E + ++ I + + L F
Sbjct: 435 LNGLP--MDDTLDSLNGTLKASEKLLASAERILKKQETQNLPADIQASLKQLETTLGGFG 492
Query: 402 --QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ +++ +R+L + + F L P +++G
Sbjct: 493 PESTVYRELETTLRELNQVMAEFKPVLRTINEKPNALIFG 532
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 6/60 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY------PNHSLAKALIR 88
E ++ SV GL + V + G+ +G + + L N I
Sbjct: 289 FDDYIEFVMMFDESVRGLKPSAPVEYRGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIE 348
>gi|327484341|gb|AEA78748.1| Paraquat-inducible protein B [Vibrio cholerae LMA3894-4]
Length = 485
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/392 (8%), Positives = 104/392 (26%), Gaps = 33/392 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLA 107
LS V + G VGR+ D E D + + + +
Sbjct: 111 AGKLSVGDPVMYEGFTVGRVESTLFDVESKKAQYQLFIFAPYDKLVNTRSFFWLNSGINL 170
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ L +++ + + + + +
Sbjct: 171 QLNAEGLEFSLGSIESLLKGGVTFG-----------------QLQEDDSGQQITQQMTEF 213
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ + K + + ++ + K + + + T+
Sbjct: 214 LLFDDVKQIREGMYGDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVY 273
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + L ++ + + ++ + + + + L D
Sbjct: 274 INIKRIPVLVRIELGRLYDNFGTTDLPNLKKRMQDEFAKGLKASLKTGNLVT--GALYID 331
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + +++ + + ++ + + + S LN + +
Sbjct: 332 TDYFPDEPADPLTQFDGYPMFPTKQGGFAEVQKQVTELLRKLNGLPMDDTLAS-LNSTLK 390
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
L++ I +E +L D Q ++ T + +
Sbjct: 391 TSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFGPE------------STVYRE 438
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ +R+L + + F L P +++G
Sbjct: 439 LETTLRELNQVMAEFKPVLRTINEKPNALIFG 470
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH--------SLAKALI 87
G E ++ SV GL + V + G+ +G + + L E N L + +
Sbjct: 228 GDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVYINIKRIPVLVRIEL 287
>gi|289811903|ref|ZP_06542532.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 155
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 46/117 (39%), Gaps = 3/117 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
++ P +V ++ GL S VR G+ VGR+ + LD + I
Sbjct: 4 TSMRTEPTYKVYATF-DNIGGLKVRSPVRIGGVVVGRVEDISLDPKTY-LPRVTLDIEER 61
Query: 91 T-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
+ +++ +IRT GL G Y+ L+ ++ + I + + + +
Sbjct: 62 YNHIPDTSSLSIRTSGLLGEQYLALNVGFEDPELGTSILKDGSTIQDTKSAMVLEDM 118
>gi|326382980|ref|ZP_08204669.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198116|gb|EGD55301.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 361
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/108 (22%), Positives = 44/108 (40%), Gaps = 6/108 (5%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ TS+G + IL + S ++L G A + GL T + VR G+
Sbjct: 28 RRSATSIGALGLLILIMTAVSSFYLKDL-PLVGAGARYTAQFSE-AAGLKTGNEVRVAGV 85
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
VG++ + L + + +T + T A+I+ + + G Y
Sbjct: 86 KVGQVTAVKLAGD---KVDVEFSAN-NTWIGNQTQASIQIKTVLGQKY 129
>gi|318042786|ref|ZP_07974742.1| ABC-type transport system, periplasmic component [Synechococcus sp.
CB0101]
Length = 302
Score = 69.6 bits (167), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 73/266 (27%), Gaps = 7/266 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG ++ + + WL + + GL+ S+V +
Sbjct: 1 MRRSVREAIVGFTLIGAIAGTGLFWLWLRGVS-VASRTWHFRVNF-ADASGLAERSAVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG + L +A I L A ++ L G +
Sbjct: 59 RGVLVGSVDKLT---TTSAAVVADLEINDTSLQLPLPLVAQVQEASLLGGDAVVALIAPS 115
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ SG NA + S + ++++ P
Sbjct: 116 RQLPAGTPGPTAADCNRKLTVCSGATLNGVNAASISSLTVTMQKLLEQVDRENLVPELAK 175
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ A + + ++ T + + ++ +A+D K
Sbjct: 176 TTRSFDTTAKEATKFMEDGQQLIKDL-EAAVKSAQPTIDNLNASTANIRNFTRALDNPKT 234
Query: 240 NQILENIQVSSNNFVKSSDQVINTVH 265
L+N ++ + ++V V
Sbjct: 235 VSELKNTVTNAEKLTERWNEVGGDVE 260
>gi|146281425|ref|YP_001171578.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Pseudomonas stutzeri A1501]
gi|145569630|gb|ABP78736.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Pseudomonas stutzeri A1501]
gi|327479602|gb|AEA82912.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Pseudomonas stutzeri DSM 4166]
Length = 152
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 45/104 (43%), Gaps = 4/104 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ ++ ++ GL+ S V G+ +G++ + LD++ I+ D
Sbjct: 32 SVGSADTYKLYAYF-DNIAGLTVRSKVTMAGVTIGKVTAIDLDRDSYTG-RVTLEIQEDV 89
Query: 92 PL-YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
+ +TA+I T GL G Y+ +S + + + T ++ +
Sbjct: 90 NILPADSTASILTAGLLGEKYVGISVG-GDDEVLKDGDTIQDTQ 132
>gi|119897984|ref|YP_933197.1| hypothetical protein azo1693 [Azoarcus sp. BH72]
gi|119670397|emb|CAL94310.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 312
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/274 (13%), Positives = 83/274 (30%), Gaps = 1/274 (0%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ PM E ++ G+V+GL+ VR+ G+ G + + LD + P L + IR
Sbjct: 28 FSDGREPMREYVLVSEGTVNGLNVHGRVRYRGMLAGNVAHIGLDPQNPRLILVRIRIREG 87
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
P+ T A + TQGL G+ +++L + + + + I
Sbjct: 88 LPVTRGTRAMLATQGLTGLAFVQLDERGTDPTPLVGEDGSPPRIRLEPGVMEQITDRALA 147
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLT-TTIANIETISTVLANNISHIDKMMHTTQVTPH 209
A K ++D + + + + + + T +
Sbjct: 148 AAERFKTVADRVALVVDDENIARIKRSLANLEAASAGLDRALAHAPATLEAVRNTFSPQN 207
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ + + + ++ D +T+ +V
Sbjct: 208 VARLSAALANLERTTAEAAPTVAEARTLLRRLGDVSERLEQTAATAGGDLTGSTLPEVNL 267
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ +++ L+ + + T
Sbjct: 268 LLRELAHTSRRLSGLIDEVERAPQVLLTGRGERE 301
>gi|256380614|ref|YP_003104274.1| mammalian cell entry related domain protein [Actinosynnema mirum
DSM 43827]
gi|255924917|gb|ACU40428.1| Mammalian cell entry related domain protein [Actinosynnema mirum
DSM 43827]
Length = 117
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 35/116 (30%), Gaps = 11/116 (9%)
Query: 1 MES---KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M + + G + ++ W + G + + S GL S
Sbjct: 1 MATTRARARLVRWGALACVLAVVGATALRWA-----FSGVENRRVSALFASAVGLYPGSD 55
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
VR G+ VG +V + + P+ A + + G Y++
Sbjct: 56 VRVLGVRVGTVVAVEP---RGRVVRVAVELDRRVPVPADARAVVVAPSVVGDRYVQ 108
>gi|194324164|ref|ZP_03057938.1| mce related protein [Francisella tularensis subsp. novicida FTE]
gi|194321611|gb|EDX19095.1| mce related protein [Francisella tularensis subsp. novicida FTE]
Length = 160
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 18 LFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
+ F + +S ++ ++ + +V L T++SV+ G+ +GR+ + L++
Sbjct: 1 MLCLLFLTFKVSGTSFKAFNTQEYTITADFK-NVGSLRTNASVKIAGVEIGRVTKIALEK 59
Query: 76 EYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
Y ++ I D + + +A+I G+ G Y+ LS ++ I IA
Sbjct: 60 SYNGFMAVVTMAINSDKKIPANYSASIAMSGILGDNYVALSPPSEDIMAIAGIA 113
>gi|209544218|ref|YP_002276447.1| Mammalian cell entry related domain-containing protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209531895|gb|ACI51832.1| Mammalian cell entry related domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 341
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/328 (12%), Positives = 90/328 (27%), Gaps = 16/328 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +V LF++ + + R ++ V GLS + V F
Sbjct: 18 MTRQPTALAVLLFILCGIGTGIAILGSFGRFGLL-TRTERALVVFDTPVPGLSAGAPVTF 76
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + + + +RPD IR G + L
Sbjct: 77 RGVALGRVEQVNVLPDPARGRTIIPVTIRVRPDL---------IRVIPPPGTSRPRRIAL 127
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + SGI+ + + S E+ + L
Sbjct: 128 AD---LVRDGLQAHLHSQSLVVGRSGIDLDFAPGPSPPPHPGLSHLIEIPARESHWQVLR 184
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T+A + + + D T++ + F + D + + + Q
Sbjct: 185 RTLATLPIHAMAAQWQQARADGRNIATRMDATLPPMRAGFLDVRDRAHATAAALNRAETQ 244
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + QV + D+ + V + + +D +
Sbjct: 245 TGRAWAVTHTDIDHLQATARRQVHDRGADMSAVARGAHAVIVEARQVQADLRALDADTAR 304
Query: 298 SAFLENIADSTSNMRSSISAIREITDQR 325
+ D + + A R +
Sbjct: 305 TDLATTGRDIAAAGAALHDAARTVRRTP 332
>gi|311107309|ref|YP_003980162.1| Mce related family protein 3 [Achromobacter xylosoxidans A8]
gi|310761998|gb|ADP17447.1| Mce related family protein 3 [Achromobacter xylosoxidans A8]
Length = 554
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/400 (9%), Positives = 109/400 (27%), Gaps = 34/400 (8%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGL 106
+ L S V F I VGR++G LD+ D + T +
Sbjct: 181 DLGSLDIGSPVYFRRINVGRVIGYALDETGKAVNVEVFVDAPNDKFVTQGTRFWNASGVD 240
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+ L +++ +A + + ++A+ +++
Sbjct: 241 FSVNADGLKV---RTQSLVSMAVGGVAFEPVISARDAGKPAQADAQFDLYPTETAAKANP 297
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ T+ + + + + + + T
Sbjct: 298 DGEAFPIRMRFDQSIRGLTVGAPIDFSGITLGNVTQINMDFDPIAKRFYSLVDATLYPER 357
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
L ++ + + V +K + + T +
Sbjct: 358 LGRVFDEVRERAVKDGDAAGNRLLGGMIK--HGLRAQLRTANLLTGQLYVALDDFPNAKP 415
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
N+ + + ++ I +I + I +L +
Sbjct: 416 VEFKLSDPAMIPTVPGNLDQLQQQISNIVAKIEKIP------------FDKIGEDLRTTL 463
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
++LM++++ + +AQ + +++ ++N + S + N
Sbjct: 464 ASTSKLMNRLDK--------QVAPEAQNMLKQAKESMAQVNALLASDASLPVN------- 508
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ +++L + + NP+ ++ GR +
Sbjct: 509 -TEKAMQELGRAARSLRALADFLQANPEALLRGRGPDPIP 547
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/247 (10%), Positives = 64/247 (25%), Gaps = 7/247 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
DG + +R S+ GL+ + + F+GI +G + + +D + + D LY
Sbjct: 298 DGEAFPIRMRFDQSIRGLTVGAPIDFSGITLGNVTQINMDFDPIAK---RFYSLVDATLY 354
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
P + + + + + RA + ++
Sbjct: 355 PERLGRV----FDEVRERAVKDGDAAGNRLLGGMIKHGLRAQLRTANLLTGQLYVALDDF 410
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + I +S
Sbjct: 411 PNAKPVEFKLSDPAMIPTVPGNLDQLQQQISNIVAKIEKIPFDKIGEDLRTTLASTSKLM 470
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
N + + +VN +L + N K+ ++ +R
Sbjct: 471 NRLDKQVAPEAQNMLKQAKESMAQVNALLASDASLPVNTEKAMQELGRAARSLRALADFL 530
Query: 275 QEVGQKI 281
Q + +
Sbjct: 531 QANPEAL 537
Score = 44.2 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 10/91 (10%), Positives = 32/91 (35%), Gaps = 10/91 (10%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+S+ + + V +++ S W+ +GL + +R+
Sbjct: 23 KSRISWIWLVPIVAALMGLSLVVRTWMQAGPDISISFYT--------AEGLEVGKTQLRY 74
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ +G + + +++ + +A + D
Sbjct: 75 KDVNIGTVRSIGFNEDRT-KVVVQAELSKDV 104
>gi|120401976|ref|YP_951805.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954794|gb|ABM11799.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 345
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/283 (13%), Positives = 96/283 (33%), Gaps = 8/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ +G V+++ ++ + + D + + + L + V GIPV
Sbjct: 16 HSAWLGFAAVAVVAVLIGAMLLIKGA---DVGYRKYTAQFLQAAA-LQPGNPVTVAGIPV 71
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + G+ L + H +A +R D L + A I+ + G Y+ L
Sbjct: 72 GEVTGMELAGD---HVVADFTVRNDVALGEDSRAVIKVTTILGSRYLSLEPEGPGSLPDR 128
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + S K ++S + + ++ + + + + N T
Sbjct: 129 RFDLAHTEVPYD-LQEALTDVATTFEQVDSDKFAESLAILGRQLQGLPEVVPQALQNTHT 187
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ST+LA + ++ TT V + + + + + + +L
Sbjct: 188 LSTILAQRRDQLGALLETTDVVSTTLKRQQSNIASMVRQGNDLVGEFVVRRASFHAMLAA 247
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I + + + ++ + D L+ +
Sbjct: 248 ITDLVQTLSDIVIGDRPELEALLVNVRELSDMLGQHDDLVRNI 290
>gi|41406211|ref|NP_959047.1| hypothetical protein MAP0113 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41394559|gb|AAS02430.1| hypothetical protein MAP_0113 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 416
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/327 (12%), Positives = 92/327 (28%), Gaps = 10/327 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL ++ L + + +V IR+P S GL + V GI VGRI
Sbjct: 25 GLALLVALVVGAAYLALGALRVNPLESTYQVTIRLPES-GGLLANQDVSVRGIRVGRIRS 83
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
L A I T + S+ + AG YI+ + +
Sbjct: 84 LRPIPSG---VEVVANINAHTRIPASSPVRVSGLSPAGEQYIDFEPTSNTGPFLSDGSVI 140
Query: 131 RNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
Q S + + + + + + + + + T
Sbjct: 141 GPQHTTTPIPLSQVLADADGLLAQTDPKKLEIVKRELSLSNQGPQKLTDIIDGSTFLLST 200
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ VL +S + + + + + + + V+Q
Sbjct: 201 MDPVLPQTVSMLKTSRVALTTLSDKNAGLSVAARNVGDLMAGVNKMDRGYRRLVDQTPHA 260
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS-SKMKSKETSAFLENI 304
+ N F +SD ++ + ++ T + ++ + ++ S +++ T+ +
Sbjct: 261 LSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVFPNYRGSTLEALMTTMHEHGL 320
Query: 305 ADSTSNMRSSISAIREITDQRQKIIST 331
+
Sbjct: 321 WATADIYPRYTCDYGTPRRPSSSADYP 347
>gi|118468094|ref|YP_887177.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118169381|gb|ABK70277.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 358
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/306 (12%), Positives = 91/306 (29%), Gaps = 7/306 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
GL+ + V+ +G+ VG + + L + + T L T
Sbjct: 39 SVRYHAEFAE-AGGLTAGNEVKVSGVTVGTVSDVELV---NGRARVTFALDGKTRLGQDT 94
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
TA IRT L G + + + + + + T + ++ + AE +
Sbjct: 95 TAHIRTGTLLGQRVLTVEPKGSGRIGPSGVIPVSRTGSPYSLTDAVGDFTTNTAETDTAA 154
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
I+ S + + IE I L T I +S L N + ++ + ++
Sbjct: 155 INQSLDVLSETIERIAPQLAPTFDGITRLSQSLNNRNESLADLLKSASEITGILSERSEQ 214
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
L + + + +L N + V + ++ + +V
Sbjct: 215 VNRLILNANDLLAVVRDRRYVIVNLLANTSAVARQLSAL---VSDNEAELAPALEKLNKV 271
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
++ + ++ +K + A + ++ Q +
Sbjct: 272 LAMLERNRDNLTASLKGLAKYQLTQGEAVNNGFYYYGFASNLLPGPAIQPFLDYALGFRR 331
Query: 338 ITSNLN 343
+
Sbjct: 332 GVNAGQ 337
>gi|326383825|ref|ZP_08205510.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326197589|gb|EGD54778.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 347
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/286 (12%), Positives = 95/286 (33%), Gaps = 7/286 (2%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
Y + + + GL+ V G+P GRI + L + + + PL
Sbjct: 55 YRSGTSPYTAELH-NAGGLTKSDPVLVAGVPAGRIESIALAGD---RVRVGFRLDDEQPL 110
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T + +R + + G Y+E+ + ++ + + +
Sbjct: 111 GNRTRSNVRLRTVLGKRYLEIIPGGTGRVG-PDDTIPLSRTGDSYTLDDVSADVVHTSTD 169
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
++ S + + LT ++ + + ++ +D+++ + S
Sbjct: 170 IDPQVVRSMMTTMRSLIPNADRLTASMDGVSGAALAVSGTGQQLDRLLGMAKRLAGISAQ 229
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI--NTVHDVRETT 271
+ + + + + ++++ +N+++ + Q+ +V T
Sbjct: 230 QADSISTAFGNAQAIAQMLVVRREILSRLADNLRLILGKMAATFPQIPMGQLTTNVVSVT 289
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
T + +ID ++ D M++ + N AD S +
Sbjct: 290 DTLKRNVGQIDAIMVDLPPAMRTITDATGNGNWADVNSPAAILPDS 335
>gi|296166531|ref|ZP_06848962.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898143|gb|EFG77718.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 347
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 34/103 (33%), Gaps = 5/103 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+F ++ + + + G++ ++V +G+ VG+
Sbjct: 5 LRTGIFGTVLVVCVVLIAFGYAALPFWPQGKI-YDAYFSD-AGGINPGNAVYVSGLKVGK 62
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + L + + + + + A IRT + G
Sbjct: 63 VTSVGLAGDS---AKITFSVDRHVGVGDQSLAAIRTDTILGER 102
>gi|183984025|ref|YP_001852316.1| MCE-family protein Mce3D_1 [Mycobacterium marinum M]
gi|183177351|gb|ACC42461.1| MCE-family protein Mce3D_1 [Mycobacterium marinum M]
Length = 448
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/311 (10%), Positives = 82/311 (26%), Gaps = 9/311 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ + +G+ T VR G+PVG+I + E + A I
Sbjct: 36 VVAYFENSNGVFTGDEVRILGVPVGKITSIEPQPES---VKVSFWYDSKYKVPADAKAAI 92
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ L I+L+ + A QR + + ++ +
Sbjct: 93 LSPTLVTSRAIQLTPAYTGGPAMSDNAVIPRQRTAVPVEWDDVRAQLAKLTKELQPTEPG 152
Query: 162 SRHI-----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+N+ + +S + H + T + +
Sbjct: 153 GVSPLGSVINTAADNLRGEGANIRDTVIKLSQAFSALGDHSTDIFSTVKNLAILVSALQD 212
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + + N++ ++ + + V + + T+
Sbjct: 213 STNFMRQLNQNLATVTGLLANDPNEVANAVRNLGDTVGEVQRFVADNREALGTTSDKLAG 272
Query: 277 VGQKIDHLLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
V Q ++ L D + T NI S++ + + + I
Sbjct: 273 VSQALNDSLDDVKQFLHVAPNTLQNYVNIWQPAQGAVSAVPMLNNFANPISFLCGAIQAA 332
Query: 336 ENITSNLNDSS 346
+ +
Sbjct: 333 SRLGYEQSAKL 343
>gi|134103288|ref|YP_001108949.1| MCE family protein [Saccharopolyspora erythraea NRRL 2338]
gi|291004495|ref|ZP_06562468.1| MCE family protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915911|emb|CAM06024.1| MCE family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 383
Score = 69.2 bits (166), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/344 (9%), Positives = 96/344 (27%), Gaps = 22/344 (6%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
++WL + G + +V G+ VR G+ VG + + + +
Sbjct: 14 AGVWWL-----FSGSERRITAYFDAAV-GVYPGGDVRILGVAVGTVDEVRPNGKT---VR 64
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ D + A + + + Y++L+ + + T+ A ++R
Sbjct: 65 VDMSLDRDVDVPADAGAVLVSPSVVSDRYVQLAPVYRGGPTMEDGAVIPSERTATPVELD 124
Query: 143 GINYFISNAENTSKK------------ISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
+ ++ ++ + ++ + + + T+S
Sbjct: 125 QVYRSLNQLTTALGPQGANADGALTELLNTGAANLDGNGKALADSIRHLGELGTTMSGNS 184
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
+D + T + + + FNT ++S + + ++ +
Sbjct: 185 EEFFGTVDNLQRFTSMLAANDEQVRRFNTQMQQVSSFLAAERGDFAAAMAELAVALGKVE 244
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS-SKMKSKETSAFLENIADSTS 309
+ + + V + Q + +D L++ + D+ +
Sbjct: 245 GFVRDNRANLKSNVDQLNGVAQVLVKQKAALDESLNNAPLALSNLNNAYNGASGTLDTRA 304
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
N+ + + + + +
Sbjct: 305 NINELNQPPLVSVCKLLQQSGRQDVPLPLADACKSLQPVIDGVA 348
>gi|257054984|ref|YP_003132816.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584856|gb|ACU95989.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 359
Score = 68.8 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/324 (12%), Positives = 85/324 (26%), Gaps = 8/324 (2%)
Query: 1 MESKNYYTSVG-----LFVVSILFFSFFSI--YWLSRSNQYDGPMAEVIIRIPGSVDGLS 53
M+ + G L + F + L V V L
Sbjct: 1 MKRLARIIAAGTAAACLLTSAGCAAEFGGLHDLPLPGGADLGDHPYRVTAHF-DDVLDLV 59
Query: 54 TDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
+++V+ N + VGR+ + L + L+ D L T A +R L G ++E
Sbjct: 60 PNAAVKVNDVAVGRVESIELADTDDWQAEVVLLVNGDVDLPADTVANVRQSSLLGEKFVE 119
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
L R T+ + + A + ++ E E
Sbjct: 120 LEAPRHNGDEPRVPLTDGALIPVSRTNRHVEVEEVFGALSLLLNGGGITQLRTINRELNE 179
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ E ++ + T + T D + + +
Sbjct: 180 ALTGNEVKIKEFLNHIDHLVSDLDSHRHDITAALDGLNRLSATLAEREDDVRNALNDLTP 239
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ +Q + + + ++ S V + + + +D L S +
Sbjct: 240 GLAELRDQRKQLLTMLTSLDELSDVAVNVIDKTRDDLVADLEALAPVLDGLAEAGQSLPR 299
Query: 294 SKETSAFLENIADSTSNMRSSISA 317
S E A +
Sbjct: 300 SLEILASFPFTDAVLDGIEGDYLN 323
>gi|183982891|ref|YP_001851182.1| MCE-family protein Mce3F [Mycobacterium marinum M]
gi|183176217|gb|ACC41327.1| MCE-family protein Mce3F [Mycobacterium marinum M]
Length = 487
Score = 68.8 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 42/122 (34%), Gaps = 6/122 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSN--QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+F V L + ++ + V + + S GL + +V + G VGR+
Sbjct: 13 IFAVIALSVLAITFLHFAKLPAMLFGVGRYTVTMELTKS-GGLYSSGNVTYRGSEVGRVE 71
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L +A ++ + A + +Q G TY+EL +
Sbjct: 72 SVQL---TDTGVVAVLSLKSGIDIPSDLKAEVHSQTAIGETYVELLPRNATSPPLKDGDV 128
Query: 130 ER 131
R
Sbjct: 129 IR 130
>gi|294816016|ref|ZP_06774659.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|326444358|ref|ZP_08219092.1| putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
gi|294328615|gb|EFG10258.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 374
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 74/253 (29%), Gaps = 5/253 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G GL+ VR G+ VG + + L + + D +
Sbjct: 72 GGGTTYTAEFTE-AAGLTEGDEVRVAGVKVGEVTSVAL---HRGVVRVRFRA-GDLWIGD 126
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
++TA I + L G Y+ + L + + T + + E +
Sbjct: 127 ASTAAIAIKTLLGEKYLAVDPLGARTQDPGTPIPTSRTTSPYDVTQAFTGLGETIGEIDT 186
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+++ S R + EN + + +S +A + + +++ ++ + K
Sbjct: 187 DRLAASFRALADTFENSAPNVRPAATGLAALSRSVAERDTRLAELLSRSKRLTRTLAGKE 246
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+L ++++L + + + +
Sbjct: 247 DSVETLLKDGTLLLDEIRARRDAIHRLLTGTRDLGEELSGVVRDNREHLEPALTSLRNVT 306
Query: 276 EVGQKIDHLLSDF 288
V + L +
Sbjct: 307 AVLVRNRESLEEA 319
>gi|145297579|ref|YP_001140420.1| paraquat-inducible protein B [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850351|gb|ABO88672.1| paraquat-inducible protein B [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 548
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/398 (7%), Positives = 112/398 (28%), Gaps = 24/398 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L S + + G +G++ E + + + ++ +
Sbjct: 172 LGVGSPINYQGFTIGQVEEAKFLPEKS-----EMQYQIFINTPYDVLVSGNSRFWMTPGF 226
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ K + + + + + P + + ++
Sbjct: 227 EVSMSSEGMKVKMDSLESLLDGGITMGLPPG-----------WAPGEPVKQMDGFTLFQD 275
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
L ++ + +++ + + I + + +
Sbjct: 276 EASVLAGSLDQFIDYVFLFEDSVGGLHPGAAVEYRGIRVGTVISAPYLIDEKGVQMFQSR 335
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ L ++ + + ++ + + T + + D +
Sbjct: 336 QIPVLARIEVQRLSHRYANAEKEQWRALFGKQFKEGLRATLKTSSLLT--GGKVVDLNFY 393
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + A +++ + I +Q ++T + +T +N + +
Sbjct: 394 PDAPKYQAIKLAGYQVFPTVQAGLDQIERKVNQILDKFVDMDTAKTLT-QVNSTLATLDQ 452
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
+ I+ +S+ + Q+ + D+ +++ + + + D++
Sbjct: 453 TLKSISAVSSNLNKFTGQSSTQQLPASLNDSLKQLQSTLQEY-----DANSQTNQDLRQS 507
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
V+ L + + +++ P +++ R + K
Sbjct: 508 VQSLNQLMRELQPLVHSLNEQPSSLIFDRARPRDPEPK 545
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/264 (14%), Positives = 94/264 (35%), Gaps = 12/264 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ + SV GL ++V + GI VG ++ + + P+
Sbjct: 286 QFIDYVFLFEDSVGGLHPGAAVEYRGIRVGTVISAPYLIDEKG---VQMFQSRQIPV--- 339
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A I Q L ++ + +++ + +F + RA + S + +
Sbjct: 340 -LARIEVQRL---SHRYANAEKEQWRALFGKQFKEGLRATLKT--SSLLTGGKVVDLNFY 393
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + I+ + + + IE + + +D TQV + T
Sbjct: 394 PDAPKYQAIKLAGYQVFPTVQAGLDQIERKVNQILDKFVDMDTAKTLTQVNSTLATLDQT 453
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+I+ + ++L+K Q++ L + + ++ D T D+R++ Q+ +
Sbjct: 454 LKSISAVSSNLNKFTGQSSTQQLPASLNDSLKQLQSTLQEYDANSQTNQDLRQSVQSLNQ 513
Query: 277 VGQKIDHLLSDFSSKMKSKETSAF 300
+ +++ L+ + + S
Sbjct: 514 LMRELQPLVHSLNEQPSSLIFDRA 537
>gi|86158285|ref|YP_465070.1| hypothetical protein Adeh_1861 [Anaeromyxobacter dehalogenans
2CP-C]
gi|85774796|gb|ABC81633.1| conserved hypothetical protein [Anaeromyxobacter dehalogenans
2CP-C]
Length = 567
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/368 (9%), Positives = 101/368 (27%), Gaps = 5/368 (1%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VG+ V L F+ + + D V R GL+ S V+
Sbjct: 1 MKPAVNKALAVGVLVAVGLAAFLFAFTFFKKGGYSDTDSYLVYARFSD-ATGLTWKSKVQ 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI VG + + LD+ +L + I PL+ +
Sbjct: 60 IAGIQVGEVSKITLDKN---KALLQIRIDRSVPLHTDACLYKSFPSALLPDALLEVIAGS 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + E + + + + + + + + + K ++ + L
Sbjct: 117 DTAPLLSSLPEAEREIKCVREATSVQQLLDSMAKIASDVQAVTGDLAKTVQGDQGSLREI 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ N+ I+ + ++ + + + D + +L
Sbjct: 177 VENLARITRQVDQVVAQNRDSLTELIANTRDFTADLREISARDKDRIHSILANVDELTAR 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ + + + + +
Sbjct: 237 LKVAAGSLQGILDGGGAGAPGGGPAGPPGAPGAPGAPGAPGAPGTAGATPAVASQQTQAK 296
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
++ ++ + + + + + + + T E + L + + ++ + ++ +
Sbjct: 297 GVQQAVGRLNDSLARLDQLLAKVQEGKSVAGRLLTDEKMGRQLGTAVEGVSDYVDRLQKM 356
Query: 360 SALKENNS 367
+ S
Sbjct: 357 QIEVQLRS 364
>gi|183984851|ref|YP_001853142.1| MCE-family protein Mce2A [Mycobacterium marinum M]
gi|183178177|gb|ACC43287.1| MCE-family protein Mce2A [Mycobacterium marinum M]
Length = 401
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 11/135 (8%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDS 56
M+ ++ Y +GL + +L F +YW + P + + P GL +
Sbjct: 1 MDPRSRPPYKIIGLAALMVLVFFGAMLYW--QFRGTFIPKTRLTMIAPR--AGLVTDPGA 56
Query: 57 SVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
V FNG+ +GR+ + + + + + P + + +ATI+ + G Y+
Sbjct: 57 KVTFNGVQIGRVSSITEVTHDGAPAARFALDVTPKYIGSIPANVSATIKATTVFGNKYVS 116
Query: 114 LSTLRKEKKTIFQIA 128
L++ A
Sbjct: 117 LTSPTDPAPQHITPA 131
>gi|118463870|ref|YP_879403.1| mce related protein [Mycobacterium avium 104]
gi|118165157|gb|ABK66054.1| mce related protein [Mycobacterium avium 104]
Length = 416
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/327 (12%), Positives = 92/327 (28%), Gaps = 10/327 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL ++ L + + +V IR+P S GL + V GI VGRI
Sbjct: 25 GLALLVTLVVGGAYLALGALRVNPLESTYQVTIRLPES-GGLLANQDVSVRGIRVGRITS 83
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
L A I T + S+ + AG YI+ + +
Sbjct: 84 LRPIPSG---VEVVANINAHTKIPASSPVRVSGLSPAGEQYIDFEPTSNTGPFLSNGSVI 140
Query: 131 RNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
Q S + + + + + + + + + T
Sbjct: 141 GPQHTTTPIPLSQVLADADGLIAQTDPKKLEIVKRELSLSNQGPQKLTDIIDGSTFLLST 200
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ VL +S + + + + + + + V+Q
Sbjct: 201 MDPVLPQTVSMLKTSRVVLMTLSDKNAGLSVAARNVGDLMAGVNKMDRGYRRLVDQTPHA 260
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS-SKMKSKETSAFLENI 304
+ N F +SD ++ + ++ T + ++ + ++ S +++ T+ +
Sbjct: 261 LSTVDNLFDDNSDTMVGLLANLVTTARVVYLRVPALNAVFPNYRGSTLEALMTTMHEHGL 320
Query: 305 ADSTSNMRSSISAIREITDQRQKIIST 331
+
Sbjct: 321 WATADIYPRYTCDYGTPRRPSSSADYP 347
>gi|126433445|ref|YP_001069136.1| hypothetical protein Mjls_0836 [Mycobacterium sp. JLS]
gi|126233245|gb|ABN96645.1| Mammalian cell entry related domain protein [Mycobacterium sp. JLS]
Length = 350
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 15/138 (10%), Positives = 44/138 (31%), Gaps = 4/138 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++ + + + + + + + GL D+ VR
Sbjct: 1 MKTGAALWRLAISGIVAITLFILLANVIKQPTAAETRAYTAE---FTDASGLHADADVRV 57
Query: 61 NGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG++ + L+ + + ++ + + T I+ + L G+ Y+++ +
Sbjct: 58 RGVRVGKVQSVDLERRNGQSIAVVRLTCDQRYGVVSGTRLAIKFEALTGLRYVDVVDPAE 117
Query: 120 EKKTIFQIATERNQRAMI 137
+
Sbjct: 118 NYSKADLVTDVTTTMTQP 135
>gi|317508282|ref|ZP_07965962.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253457|gb|EFV12847.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 347
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/126 (23%), Positives = 48/126 (38%), Gaps = 10/126 (7%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
F+VS++ IY+ + V + GL SVR GI +G++ +
Sbjct: 25 AFIVSVILAGTAIIYFF----PFGEKPYSVRQYVT---GGLKPGDSVRLAGIDIGQVKSV 77
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L+ + H L K IR D + + ++ G ++EL KE I ER
Sbjct: 78 GLEGD---HVLVKFNIRDDIRVGDQSGTEVKLLTPVGGHFLELKLKGKEPLGDKPIPVER 134
Query: 132 NQRAMI 137
+
Sbjct: 135 SHSPFD 140
>gi|302560795|ref|ZP_07313137.1| virulence factor Mce family protein [Streptomyces griseoflavus
Tu4000]
gi|302478413|gb|EFL41506.1| virulence factor Mce family protein [Streptomyces griseoflavus
Tu4000]
Length = 339
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 41/135 (30%), Gaps = 10/135 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + G+ + +L + L+ + D + +V G+ S +R
Sbjct: 1 MSRRGR-VLTGVLALVVLVTAG-----LTTARVLDSDGTRITAYFDRAV-GVYAGSDLRI 53
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + L+ + A + + Y++L+
Sbjct: 54 LGVRVGEVESVRPRGTT---VRVGLLLDEGVKVPEGARAVVVAGSIVADRYVQLTPAYSS 110
Query: 121 KKTIFQIATERNQRA 135
+ + A R
Sbjct: 111 GPALAEGAVLPAARN 125
>gi|126433446|ref|YP_001069137.1| hypothetical protein Mjls_0837 [Mycobacterium sp. JLS]
gi|126233246|gb|ABN96646.1| Mammalian cell entry related domain protein [Mycobacterium sp. JLS]
Length = 319
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 11/138 (7%)
Query: 1 MESKNYYTS--VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ T G + + ++ ++S Q + +I + V
Sbjct: 1 MKVLRNPTVWGAGALALMTIIALVIAMVYVSPPGQ------KTVIFYTDDAAAIRPGDPV 54
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R GI VG++ L L+ +A + + + +R + G Y+ +S +
Sbjct: 55 RIAGINVGKVKDLSLESN---QIRVEARVDNSAFVGDRSQVQVRMLTVVGGYYVSISPIG 111
Query: 119 KEKKTIFQIATERNQRAM 136
I ER
Sbjct: 112 DAPLGNKPIPVERVTMPY 129
>gi|297621448|ref|YP_003709585.1| hypothetical protein wcw_1222 [Waddlia chondrophila WSU 86-1044]
gi|297376749|gb|ADI38579.1| hypothetical protein wcw_1222 [Waddlia chondrophila WSU 86-1044]
Length = 371
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/366 (11%), Positives = 104/366 (28%), Gaps = 27/366 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + +F+++ L F + +L +G + V V + V F
Sbjct: 1 MQDQMKNMLIAIFIITALAIIVFMVIFLHPYTGDEGQILHVRFTDIDKVS---VGTRVTF 57
Query: 61 NGIPVGRIVGLFLDQ-------EYPNHSLA---KALIRPDTPLYPSTTATIRTQGLAGIT 110
G PVG + + + E + + +Y S ++RT GL G
Sbjct: 58 AGKPVGEVTKISVLPEVRLGRTEKKGDVYVYELTLAVDSNLKVYNSDKVSLRTSGLLGEK 117
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
I I + ++ + + E+T + + + K++E
Sbjct: 118 SIS----------IDPEPIKPGEKLRLVNDEIIYAEGTGSVEDTFNEFKEVADKFDKVLE 167
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
I + L + + + + +T ++++ ++ +
Sbjct: 168 LITEALQELKDRGMWENIANTADNISEITARLSERWND----VDDTIVSLSEAASNTKNI 223
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ I + S T D + + L + +
Sbjct: 224 TERIHTGEGTLGRIVSSDDLYLRTNSILSKGETAMDDINHYGILFHLDKGWQRLRARRLN 283
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
M+ T N + N S+ + + + + + + ++
Sbjct: 284 LMQKLRTPQEFRNFFNDEINQISTSISRVSMVLDKSECYPCLMDDCEYQKVFAELMRRVE 343
Query: 351 ELMSKI 356
L +
Sbjct: 344 SLEENV 349
>gi|226306851|ref|YP_002766811.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226185968|dbj|BAH34072.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 439
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 45/124 (36%), Gaps = 6/124 (4%)
Query: 12 LFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
+F + + +I +L V + +P GL +++V + G +G++
Sbjct: 13 IFAILAVIGMSAAAISYLRVPTMLGIGRYSVTVELPD-AGGLYRNANVTYRGDTIGQVRS 71
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTAT-IRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L P A+ + P+ S A +R+ G Y+++ + +
Sbjct: 72 VRL---TPGVVRAELSLESAVPVPSSGLAVAVRSVSAIGEQYVDMQPSTADGPFLADGDV 128
Query: 130 ERNQ 133
+
Sbjct: 129 IGPE 132
>gi|319951379|ref|ZP_08025204.1| Mce family protein [Dietzia cinnamea P4]
gi|319434976|gb|EFV90271.1| Mce family protein [Dietzia cinnamea P4]
Length = 382
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 47/332 (14%), Positives = 97/332 (29%), Gaps = 8/332 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G++ + R +G GL T V+ G+ VG
Sbjct: 25 VRTGIWGAVGVIVLMGVSLNYDRIPYVNGMRG--ATAYVADAAGLDTGDEVQVAGMAVGS 82
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ G+ LD + + I D L TTA I+T + G + + + + + I
Sbjct: 83 VRGIDLDGD---RVRVRFDIDTDVALGADTTAQIKTDSILGRRALGVYSDGRGELEDNTI 139
Query: 128 ATERNQRAMITATPSGINYFISNA---ENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
ER + G A + + ++ + ++ + +
Sbjct: 140 PLERTSVPYSLTSALGDLSDTVEAMDTDKVDEALTVLAETMEGSSPEVRGAIDGITRLSR 199
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+++ +DK TT V SD N + + + + + + I E
Sbjct: 200 SLNERDEAVRELLDKAAGTTDVLGRRSDQINQLMVDGNTLFVQLDLRRRALSELIVNIDE 259
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ S + Q+ + + + T ID L + +
Sbjct: 260 LSRQLSGVVQDNEAQLGPALDKLEQVTDLLIRNKDDIDLGLRRIIPFSTALSEAVASGPW 319
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIE 336
++ + S + I +I E
Sbjct: 320 FNAYVSNLSIGQYQQTILRDLMPLIDDRVQPE 351
>gi|162147162|ref|YP_001601623.1| putative paraquat-inducible protein [Gluconacetobacter
diazotrophicus PAl 5]
gi|161785739|emb|CAP55310.1| putative paraquat-inducible protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 324
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/328 (12%), Positives = 90/328 (27%), Gaps = 16/328 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +V LF++ + + R ++ V GLS + V F
Sbjct: 1 MTRQPTALAVLLFILCGIGTGIAILGSFGRFGLL-TRTERALVVFDTPVPGLSAGAPVTF 59
Query: 61 NGIPVGRIVGLFLDQE---YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+ +GR+ + + + +RPD IR G + L
Sbjct: 60 RGVALGRVEQVNVLPDPARGRTIIPVTIRVRPDL---------IRVIPPPGTSRPRRIAL 110
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + SGI+ + + S E+ + L
Sbjct: 111 AD---LVRDGLQAHLHSQSLVVGRSGIDLDFAPGPSPPPHPGLSHLIEIPARESHWQVLR 167
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T+A + + + D T++ + F + D + + + Q
Sbjct: 168 RTLATLPIHAMAAQWQQARADGRNIATRMDATLPPMRAGFLDVRDRAHATAAALNRAETQ 227
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + QV + D+ + V + + +D +
Sbjct: 228 TGRAWAVTHTDIDHLQATARRQVHDRGADMSAVARGAHAVIVEARQVQADLRALDADTAR 287
Query: 298 SAFLENIADSTSNMRSSISAIREITDQR 325
+ D + + A R +
Sbjct: 288 TDLATTGRDIAAAGAALHDAARTVRRTP 315
>gi|257054445|ref|YP_003132277.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584317|gb|ACU95450.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 343
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 4/114 (3%)
Query: 25 IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
I LS +N G R + VR G+ VG++ + + + +
Sbjct: 24 ILGLSIANVNLGGTHTYTARFTD-ATSVLPGDDVRIAGVMVGKVSDVRIV--DRRIAEVE 80
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK-TIFQIATERNQRAMI 137
+ + L +T A I+ + L G Y+ L E + + T +R
Sbjct: 81 FELDRNRTLPDNTVAAIKFRNLIGQRYLSLERGEGEPQGVLEPGDTIPLERTRP 134
>gi|296165202|ref|ZP_06847749.1| virulence factor Mce family protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295899391|gb|EFG78850.1| virulence factor Mce family protein [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 94
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + ++ LF+V L + + ++S G A+ V GL VR
Sbjct: 1 MRFRGPLIALTLFMVVSLTLT--WLVYVSLRRDVAGNTAKYSAVFSD-VYGLREGDDVRM 57
Query: 61 NGIPVGRIVGLFLDQ 75
G+ VGR+ + LD
Sbjct: 58 AGVRVGRVEKIELDG 72
>gi|307565848|ref|ZP_07628309.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
gi|307345472|gb|EFN90848.1| conserved hypothetical protein [Prevotella amnii CRIS 21A-A]
Length = 326
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 36/107 (33%), Gaps = 3/107 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ L V + FF + +L + ++ + G++ + + NG+ VG
Sbjct: 8 EVKIALVAVLAIIVLFFGLQFLKGLS-LFSNSTHYQMKF-NDISGVTPTTPIFANGVKVG 65
Query: 67 RIVGL-FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
+ + + N L I D L T A I + +
Sbjct: 66 TVRDINYDYNNPNNPILVDVNIEKDMKLPIDTHADILSDIMGNTKVN 112
>gi|254818330|ref|ZP_05223331.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 372
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/319 (10%), Positives = 94/319 (29%), Gaps = 22/319 (6%)
Query: 5 NYYTSVGLF--VVSILFFSFF-----SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
GL V++++ + W + M GL+ +
Sbjct: 7 AGLVKAGLIGTVLAVMVILVGLSPDRFVAWAT--------MVRYQALFTE-AGGLAAGNP 57
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V +G+ VG + + L +L ++ + L T+A IRT L G + + +
Sbjct: 58 VIVSGMKVGTVSDVKL---RHGDALVTFAMKGNVLLGSETSAHIRTGTLLGERMLAVESA 114
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + T + + A + ++ S + ++ I +
Sbjct: 115 GSGTMHPMALIPVSRTSSPYSLTEAVSDLTTDTAGTNTAALNQSLDTLAATLDQIAPQMG 174
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ +S L + ++ + + ++ L + + Q
Sbjct: 175 PAFDALTRLSRTLNSRNKNLGDLFKSAGDVTGVLSERSQQVNKLILNSDSLLQVLVARRQ 234
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++ +L N + V + + T + V ++ + + + +
Sbjct: 235 EIVDLLANTSAVAKQLTAL---VHDNESTLAPTLERLNSVTAMLEKNRDNIAKSLAGLKK 291
Query: 298 SAFLENIADSTSNMRSSIS 316
A + + +
Sbjct: 292 FQITVGEAIAGMYAYQAFA 310
>gi|296141840|ref|YP_003649083.1| hypothetical protein Tpau_4175 [Tsukamurella paurometabola DSM
20162]
gi|296029974|gb|ADG80744.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 370
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/180 (11%), Positives = 62/180 (34%), Gaps = 7/180 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + G+ V ++ ++L ++P ++ GL + V G+
Sbjct: 8 SKWLISGIAVAIVIVLGLGGAWYLRGGT---ERSVTYCAQMPDAI-GLYEGNPVTRRGVT 63
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG++ + + + + + + + S +A + L + L T+
Sbjct: 64 VGKVTAVSAEG---AKARVEMSVSANERIPASASAVTVAKSLIASRQLALIGDDNGGPTL 120
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + ++ T S + ++ T+ + ++ Q+ + + + T I
Sbjct: 121 QPGKCIVDTKTPLSLTKSMEGVYRLTSQVTTGGGPEQTKQAQQALGALARETNGTGPQIN 180
>gi|254392562|ref|ZP_05007740.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|197706227|gb|EDY52039.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 374
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/253 (11%), Positives = 74/253 (29%), Gaps = 5/253 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G GL+ VR G+ VG + + L + + D +
Sbjct: 72 GGGTTYTAEFSE-AAGLTEGDEVRVAGVKVGEVTSVAL---HRGVVRVRFRA-GDLWIGD 126
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
++TA I + L G Y+ + L + + T + + E +
Sbjct: 127 ASTAAIAIKTLLGEKYLAVDPLGARTQDPGTPIPTSRTTSPYDVTQAFTGLGETIGEIDT 186
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+++ S R + EN + + +S +A + + +++ ++ + K
Sbjct: 187 DRLAASFRALADTFENSAPNVRPAATGLAALSRSVAERDTRLAELLSRSKRLTRTLAGKE 246
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+L ++++L + + + +
Sbjct: 247 DSVETLLKDGTLLLDEIRARRDAIHRLLTGTRDLGEELSGVVRDNREHLEPALTSLRNVT 306
Query: 276 EVGQKIDHLLSDF 288
V + L +
Sbjct: 307 AVLVRNRESLEEA 319
>gi|169631114|ref|YP_001704763.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243081|emb|CAM64109.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 359
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/342 (9%), Positives = 96/342 (28%), Gaps = 7/342 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ L V+SI+ + + + S GL + S V GI VG
Sbjct: 4 KVLLTLAVLSIISLVGAVYMAFGVLDIASTSKTNHMTLMLNSSGGLMSTSQVTLRGIKVG 63
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
R+ + + P+ + +++ AG Y+E +R E
Sbjct: 64 RVTDIQATATGLA---VSMALDSGYPIPVDSQVSVQNLSAAGEQYVEFKPVRIEPPYYSD 120
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT--TTIANIE 184
A +A T S + + + + ++ T
Sbjct: 121 GAVIPASKAAPVYTVSDLLQKGNALMQAMDADALETTLNNVAAGFVDNTKTIDELATTAR 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL--QKVNQI 242
+ ++ ++ ++ +++ T + + + ++ + + + + + ++
Sbjct: 181 LFAQMVNDDKHYLAELIGNTSTITNGLGEIRAGDILKQSAKTVPRSLAGLGDLVKVIEKL 240
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ + +D V + ++ E ++ +++
Sbjct: 241 EPIVEAGMGDGKPLTDLVDKLFDYINALSEPLSEFTTVLEPIVAPLRDVKLDAGHWLDFW 300
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ + + E + T+ +
Sbjct: 301 DSTFNNQGGLRIHLGVPEWPQPDPHQTAPGTQPAQPTAKPSA 342
>gi|296171123|ref|ZP_06852576.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894379|gb|EFG74132.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 404
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/272 (11%), Positives = 84/272 (30%), Gaps = 13/272 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ E GL T ++V+ +G G + + LD L + L
Sbjct: 39 FFKSGREYSAYFAE-AGGLLTGAAVQVSGFKAGTVDSIALDGP---RVLVTFEVDKHIRL 94
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ A+I+T+ L G +E++T + P +
Sbjct: 95 GERSEASIKTKSLLGAKILEITTRGDGGL---SGPIPLERTHAPYQLPEA------LGDL 145
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T A+++ +A + + +++
Sbjct: 146 GAAISGIDTNRLSESLAVLADTFSDTPADLKIAVAGVARFSQTLSDRDAQLRKLLTNANK 205
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
T + + L ++ + S N S Q+ + D R+T +
Sbjct: 206 ATTVLSERSDQITRLVADSNALLVQLQGQSRALDQISGNIAAVSRQIKGFIADNRQTLKP 265
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ ++ ++ + +++ ++
Sbjct: 266 ALDKLNEVLAIVDNRKERVRQAIKKFDDYALS 297
>gi|291298696|ref|YP_003509974.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
gi|290567916|gb|ADD40881.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
Length = 369
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/336 (11%), Positives = 92/336 (27%), Gaps = 12/336 (3%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ W V +V G+ S VR G+ VG I +
Sbjct: 19 AATAFFTW----QALSNNGRHVTAEFTRAV-GVYEGSDVRVLGVKVGEITSVQP---KGK 70
Query: 80 HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
I D P+ A + + Y++L+ + T R ++
Sbjct: 71 IVKVGLRIDEDYPIPDDAKAIVIPPSIVADRYVQLAPAYTGGARLEGGTTLGPDRTVVPL 130
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
+ + + I +N++ ++ + V H D
Sbjct: 131 ELDEVYESLDEFAGALGEDESLGEAIATAKKNLKGNGKDLGETLDNLGEVSEVLNEHSDD 190
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
+ T + + ++ + + + + ++ S
Sbjct: 191 IWGTVDNLAEFTKMLAESDAEVEVFNEQLAEVSTQLSDERGTLSKALRELSVALADIGRF 250
Query: 260 VINTVHDVRETTQTFQEV----GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
V + ++ + ++ ++ + L++ + N T + R +
Sbjct: 251 VDKNADKLTKSVEKLSDLSGVFARQQESLINILDYAPVALTNLDLAYNSRSGTMDTRDDL 310
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ I+T +E++ + D + AE
Sbjct: 311 LGPYDPAGFLCANIATAVALEDVPAACFDLADSLAE 346
>gi|329120672|ref|ZP_08249334.1| paraquat-inducible protein B [Neisseria bacilliformis ATCC
BAA-1200]
gi|327460469|gb|EGF06805.1| paraquat-inducible protein B [Neisseria bacilliformis ATCC
BAA-1200]
Length = 541
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/398 (8%), Positives = 94/398 (23%), Gaps = 34/398 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L + V + +PVG++ + D E DT + + + +
Sbjct: 174 LDIGAPVVYESLPVGQVESVHFDPETRRTDYTVFIGHPNDTLINARSRFWLDSGIRLRTD 233
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ A + K ++ Q +
Sbjct: 234 GGGFQLDSAPLGALISGAIAFSTPD--------------------KTAKAAAEGQQFELY 273
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ T + S +
Sbjct: 274 ANRAAADSLPGERAIYYTAFFKQSVRGLAAGSPVEYKGLRVGSVADVPYFAPGDSLKLFS 333
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ + + + + + + T T + ++ +
Sbjct: 334 DGLIPVRLRIEPHLIEKNADHESREYWQNALQTAFARGLTASLAADNLILGSKMIELADN 393
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ A + + ++ LN S +
Sbjct: 394 GSGAPLKPAAEYAGVPVIATRSGGGLDDLQNQLSALLDKLNRLPLDKTVGELNGSLAELK 453
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ N++ A + ++ + + + R T ++ + D+Q+
Sbjct: 454 HTLKSANSLLAKPQTQAIPAELNQTLAELRQTLRGVSP------------ASPVYRDVQD 501
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGRE-KGSVKI 447
+R++ T+ L+ + P +++ + K +V
Sbjct: 502 TLRRIDRTLGDAQPLLDTLKEKPNSLIFNQNSKDTVPK 539
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/76 (14%), Positives = 20/76 (26%), Gaps = 7/76 (9%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY---- 77
+ + SV GL+ S V + G+ VG + + +
Sbjct: 272 LYANRAAADSLPGERAIYYTAFFKQSVRGLAAGSPVEYKGLRVGSVADVPYFAPGDSLKL 331
Query: 78 --PNHSLAKALIRPDT 91
+ I P
Sbjct: 332 FSDGLIPVRLRIEPHL 347
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 7/98 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L + L + GP + + S +GL +++V R + VG+I + L
Sbjct: 25 IVPLLAFLVGGWLLFDHIRNTGPKITLYL---DSAEGLEVNNTVVRVLSVNVGKITNIRL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
+ A + D + T + + G
Sbjct: 82 RGDGKG-VELTAQLNADVKDMMKTDTQFWVVKPRIDGS 118
>gi|85860839|ref|YP_463041.1| hypothetical protein SYN_01688 [Syntrophus aciditrophicus SB]
gi|85723930|gb|ABC78873.1| hypothetical membrane protein [Syntrophus aciditrophicus SB]
Length = 318
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/305 (12%), Positives = 89/305 (29%), Gaps = 10/305 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VGLF++ ++ +++ + + S + L+ V
Sbjct: 1 MMFRSLEFKVGLFILITSVMIAAAVGYVAFKKDVFSRVDTYTLT-SRSGEELTEGMPVLL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VGR+ L L + K R + + I + + +
Sbjct: 60 SGFKVGRVDALELGSDGRVLIKLKIPHRYAKWIRTDSVFIINKPLIGAPRIVISTRNMSS 119
Query: 121 KK-------TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ + +N N E + ++D ++ +I+ N
Sbjct: 120 PPLSTDTIREVVVANDINETIKKLEPVVERLNRITINIETLTANLADPQGNVNQILRNTA 179
Query: 174 KPLTTTIANIETISTVLANNI--SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
K + LA+ + + T+ S +
Sbjct: 180 KLSERAARTESLLELALADPESVHAVQTALKNTEDITIQLTSILEKVDAIAEKSDESLYG 239
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
K V +L ++ K D + N + E+T+ + + ID ++ +S
Sbjct: 240 KNGVFPSVRILLIDLVGKLAKLDKFVDHINNISANADESTKELKVLRYDIDETVNSINSL 299
Query: 292 MKSKE 296
+
Sbjct: 300 VNELN 304
>gi|52840424|ref|YP_094223.1| transmembrane protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|52627535|gb|AAU26276.1| probable transmembrane protein [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 261
Score = 68.8 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/147 (16%), Positives = 48/147 (32%), Gaps = 7/147 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
YT VG+F+V L + ++ GS+ GL T + V + G+ +G
Sbjct: 20 YTLVGIFIVGALCLMILGGTFF-YIEYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIG 78
Query: 67 RIVGLFLDQEYPNH-----SLAKALIRPDTPLYPSTTA-TIRTQGLAGITYIELSTLRKE 120
+ + + + + + + I +A IT L T E
Sbjct: 79 EVKVIEITENKEHSKVLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAE 138
Query: 121 KKTIFQIATERNQRAMITATPSGINYF 147
+ I + ++ + P +
Sbjct: 139 IELIKPTPAVKYKQTYYHSYPVFPTHN 165
Score = 47.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 14/159 (8%), Positives = 51/159 (32%), Gaps = 11/159 (6%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + + + T L ++ + + + T + + ++
Sbjct: 113 DPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVFPTHNSAEKYTS 172
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ ++ + + ++ + KE + Q+ + +N+ +PS+ L
Sbjct: 173 MEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQ-- 230
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++++ + + R P+ ++ G+
Sbjct: 231 ---------SLKQITSAAYSTQNLTDYLSRYPESLLRGK 260
>gi|325674882|ref|ZP_08154569.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|325554468|gb|EGD24143.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 352
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/316 (9%), Positives = 92/316 (29%), Gaps = 7/316 (2%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
Q+ GL+ +V G+ VG++ + LD + L +
Sbjct: 34 QFLSGGVRYSAAFSE-AGGLTVGDNVTVAGVDVGKVDKVELDGQ---QVLVTFTVSEGIV 89
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
L ST A I+T + G + ++ + + + + T + + S +E
Sbjct: 90 LGDSTGADIKTNTVLGKKSLAVAPEGSGTLRVGETIPIERTNSPYSLTDALGDLGSSISE 149
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ ++ S + +++ L + + +S + + +++ +
Sbjct: 150 LDTDQLDKSLDAVSGALQDTPPELRAALDGVSRLSKSINERDESLLELLKRAEGVTKVLS 209
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
++ + + +N+++ N S V + T
Sbjct: 210 DRSDQINSLIVDGNELFGELERRRDAINELIVNTSAVSRQLS---GLVQENQAQMGPTLD 266
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + + + + ++ + + + + +
Sbjct: 267 NLNQAVAVLQRNKQNIADALDGLGPYIGALGETVASGPYFKAYVSNILPSMWWKTALDAG 326
Query: 333 NTIENITSNLNDSSQK 348
+ + +L D +
Sbjct: 327 LAPDQLPQDLQDLIPE 342
>gi|312138215|ref|YP_004005551.1| mce family protein mce2f [Rhodococcus equi 103S]
gi|311887554|emb|CBH46866.1| putative Mce family protein Mce2F [Rhodococcus equi 103S]
Length = 467
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK + +F + + R G + S GL +++V F
Sbjct: 2 MLSKFVKIQLVIFSILTVIGLVVMATQYVRLQDMAGIGRYKVTVELPSTGGLYRNANVTF 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G VG++ + L + A + + + A +R+ G +
Sbjct: 62 RGTTVGKVEEVRL---SDSGVEAVLNVDSAYDIPANVNADVRSVSAVGEQF 109
>gi|88811865|ref|ZP_01127118.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Nitrococcus mobilis
Nb-231]
gi|88790749|gb|EAR21863.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component [Nitrococcus mobilis
Nb-231]
Length = 165
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 38/90 (42%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+S + + +I ++ GL + V G+PVGR+ + +D + + +
Sbjct: 29 VSNISAFQQTQGYDVIAQFQNIGGLKVRAPVTLAGVPVGRVESIAVDPKTFEARVVLTIS 88
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTL 117
L T+A+I T GL G YI L
Sbjct: 89 DKYANLPQDTSASIFTAGLLGEQYIGLQPG 118
>gi|325003320|ref|ZP_08124432.1| ABC transporter substrate-binding protein [Pseudonocardia sp. P1]
Length = 321
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/294 (10%), Positives = 79/294 (26%), Gaps = 14/294 (4%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+GL V L + F P GL + V G+ GR+
Sbjct: 15 IGLVTVVALTLAAF------NYEALFSGATRYTAEFPE-AAGLQANDRVTVAGVEAGRVQ 67
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L+ + H + + + TTA+I L G ++ L
Sbjct: 68 SVELEGD---HVKVDFSVE-EAWVGNRTTASIEIATLLGSKFLAL---DPRGDAEQDPDA 120
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + + + + + + + + ++ +S +
Sbjct: 121 PIGRDRTKSPFDVVDAFNGLSGTIDQLDTDQLATSLTTLSDTFRETPPEIRGALDGLSRL 180
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S ++ T S + + ++ Q+ + I +
Sbjct: 181 SNTISSRDGQLKQLLANTRQLSTTLADRRGDVVKLVDDGNLLLGELQQRKDAIANLLDGV 240
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
V+ V + +R +T +V ++ + + + +
Sbjct: 241 QKLSVQLRGLVGDNQEQLRPALETVDKVLAVLEENRDNLGEILDKEAVFVRVFG 294
>gi|318075804|ref|ZP_07983136.1| secreted protein [Streptomyces sp. SA3_actF]
Length = 862
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/355 (10%), Positives = 87/355 (24%), Gaps = 22/355 (6%)
Query: 11 GLFVVSILFFSFFSI------------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
G V L + + L V + V L S V
Sbjct: 16 GAAAVLALCLTLGIVPVPALGFDGIEDLPLPGGADLGPHPYTVTADMKD-VLNLVPRSDV 74
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ N + +GR+ + L + + I D L T A + L G Y++L
Sbjct: 75 KVNDVTIGRVTAISLA-DDGWTARVTLRINGDVRLPSGTGARLEQSSLLGEKYVQLVEPE 133
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKIIENIEKPL 176
+ R + +S ++ + + K + E +
Sbjct: 134 DGGGRLRSGDRIPLSRTARDTEVEEVFGALSLLLNGGGVNQLKSITTELNKAVGGRESQV 193
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+T+ ++T+ T L ++ S I + + T + ++ +
Sbjct: 194 RSTLRRVDTLVTDLDDHRSDITAALDAV------NRLSATLAHRKQDVGAVLDDLAPGLK 247
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
Q + + + V + + + + L S +
Sbjct: 248 TLEEQRGSLMTMLRSLDRLQDVAVDTIDRSKADMVADLKALAPSLRSLADAGKDLPDSLQ 307
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + + +S +
Sbjct: 308 VLLTYPFTDEVLNGVHGDYLNAYLHITAADGTTLIPPLAPEDPDDGAGASGRADA 362
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 46/129 (35%), Gaps = 7/129 (5%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSVRF 60
++ FVV + + + +Y G V +P + GL T ++V +
Sbjct: 457 TRATLLKNIAFVVVAVLVLAYLGVRYADLGRYVGAADYYSVKAELPRT-GGLFTHANVTY 515
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + L + A+ I+ P + A + G YI+L
Sbjct: 516 RGVSVGRVGDIGLTADG---VEAQLRIKKSAPRIPEDAKAVVADLSAVGEQYIDLRPESD 572
Query: 120 EKKTIFQIA 128
+ +
Sbjct: 573 GGPYLGDGS 581
>gi|325674879|ref|ZP_08154566.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|325554465|gb|EGD24140.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 467
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 37/111 (33%), Gaps = 3/111 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK + +F + + R G + S GL +++V F
Sbjct: 2 MLSKFVKIQLVIFSILTVIGLVVMATQYVRLQDMAGIGRYKVTVELPSTGGLYRNANVTF 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G VG++ + L + A + + + A +R+ G +
Sbjct: 62 RGTTVGKVEEVRL---SDSGVEAVLNVDSAYDIPANVNADVRSVSAVGEQF 109
>gi|145220611|ref|YP_001131289.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213097|gb|ABP42501.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 416
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/128 (16%), Positives = 43/128 (33%), Gaps = 5/128 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ S G V ++ + + + N V +++P S GL + +V G+P+G
Sbjct: 22 WLSAGALVFILVVAAAYLFVGALQVNPLAK-SYRVTVQLPESA-GLLPNQNVTLRGVPIG 79
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
R+ L + A + + S+ + AG YI+ +
Sbjct: 80 RVERLDITPAG---VDAVVSMDSSVAVPMSSAVRVSGLSPAGEQYIDFVADSDAGPYLEN 136
Query: 127 IATERNQR 134
+
Sbjct: 137 GSVIAQDN 144
>gi|296534674|ref|ZP_06897073.1| ABC superfamily ATP binding cassette transporter substrate binding
protein [Roseomonas cervicalis ATCC 49957]
gi|296264999|gb|EFH11225.1| ABC superfamily ATP binding cassette transporter substrate binding
protein [Roseomonas cervicalis ATCC 49957]
Length = 181
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 36/92 (39%), Gaps = 2/92 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ + +DGL+ + VR G+ VG +V +D ++ + + P
Sbjct: 34 IGAGGAGSLTLTAKFDR-IDGLTPGADVRIGGVKVGSVVDQRIDPRTY-LAILRLRVEPG 91
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ ++A I ++ L G Y+ L +
Sbjct: 92 IAIPNDSSAEITSESLLGGKYVALVPGGSDTM 123
>gi|300775366|ref|ZP_07085228.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
gi|300506106|gb|EFK37242.1| conserved hypothetical protein [Chryseobacterium gleum ATCC 35910]
Length = 316
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/305 (8%), Positives = 82/305 (26%), Gaps = 10/305 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+ + + ++ + + +V+GL+ ++V NG+
Sbjct: 4 SKELKAGVIALLAIVGFVVLFQFMKGKSLFTTDNIFYAKY--DNVEGLAQSAAVSINGLK 61
Query: 65 VGRIVGLFLDQEYPNHS--LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG++ + + K + +++ I GL + ++ +
Sbjct: 62 VGQVDKIIPITSKDGKINFVVKVTVDNKFEFSKNSSLEIFEPGLMSGKEMRVNLMYGGPT 121
Query: 123 TIFQIATERN-QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + + + S + + ++ + ++ + + +
Sbjct: 122 AKDGDTLKGAFKLGTLGSLSSQVGPVKDQLQVVLHRVDSLMANANQVFDAQNRAEIKALL 181
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + + + T+ +LDK + Q
Sbjct: 182 ANLNKTVGALQATAGSVNNLVGHNDPKLQKVLDDASLTMQSGKVTLDKYGHLAESIDTKQ 241
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ I K + + + ++ D L ++ +S + T
Sbjct: 242 LNATIASLDATVGKLNQVIGGIDKGEGSLGKLMKD-----DQLYNNLNSASSNLNTLIED 296
Query: 302 ENIAD 306
Sbjct: 297 MKANP 301
>gi|226361933|ref|YP_002779711.1| Mce family protein [Rhodococcus opacus B4]
gi|226240418|dbj|BAH50766.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 424
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/324 (8%), Positives = 85/324 (26%), Gaps = 9/324 (2%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ + Y + + +G+ V+ G+ VG+I + D E
Sbjct: 30 TGWSLYRTSSTTTVTAYFANTNGIYVGDQVKILGVDVGKIDEIEPDGE---RMKVTFHYD 86
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
+ A I + L I+L+ + +R + +
Sbjct: 87 SQYQVPQDAKAAILSPSLVTSRAIQLTPAYTGGPALADRDEIPLERTAVPIEWDDFRAQL 146
Query: 149 SNAENTSKKISDSS-----RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ + S+ + + +++ T + +S ++ D + T
Sbjct: 147 QHLSESLGPTEQSANGPLGQFVNDAADSLSGKGTDIHTTLTKLSEAMSTLSDGRDDVFAT 206
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+ + + + + + ++ ++ + + +
Sbjct: 207 VRNLQVFVSALAASDQQIVQLNHNLASVSGVLTNSDQELATSLDSVDALVHRIGQFIGDN 266
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSS-KMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ ++ V ++ D T NI + A+ ++
Sbjct: 267 REGLGKSVDDLAAVTTMLNESRPDIEQLLHVLPNTLQNFYNIYQPAQGSMTGALAVTQMQ 326
Query: 323 DQRQKIISTINTIENITSNLNDSS 346
+ Q I I + +
Sbjct: 327 NPIQFICGAIQAASQKGAAESAKL 350
>gi|120406145|ref|YP_955974.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958963|gb|ABM15968.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 564
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/112 (15%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + +F + + +++L + V G+ +++V
Sbjct: 1 MLDRLTRLQLMIFAIVTVLSVGAVSLFYLHVPSAVGIGAYNVTANFVA-GGGIYQNANVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ G+ +G + + L +A + TP+ + TAT+++ G Y
Sbjct: 60 YRGVTIGHVKSVGL---SDTGVVAHMQLNSGTPVPENVTATVKSVSAIGEQY 108
>gi|169631668|ref|YP_001705317.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243635|emb|CAM64663.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 452
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 44/121 (36%), Gaps = 6/121 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VGL V+IL + + + +V +++ S GL + V G+P+GR+
Sbjct: 34 VVGL--VAILVICVGYVMFGTLKVNPIESEYQVKVQLHES-GGLLPNQEVTLRGVPIGRV 90
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ LD +A A I L + + AG Y++ + +
Sbjct: 91 ESVNLD---KGGVVAIAAINGSVKLPVDSEVRVSGLSPAGEQYLDFRPTTNNGPFLGNNS 147
Query: 129 T 129
Sbjct: 148 V 148
>gi|229492703|ref|ZP_04386504.1| MCE family protein [Rhodococcus erythropolis SK121]
gi|229320362|gb|EEN86182.1| MCE family protein [Rhodococcus erythropolis SK121]
Length = 439
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 6/124 (4%)
Query: 12 LFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
+F + + +I +L V + +P GL +++V + G +G++
Sbjct: 13 IFAILAVIGMSAAAISYLRVPTMLGIGRYSVTVELPD-AGGLYRNANVTYRGDTIGQVRS 71
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTAT-IRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L P A+ + P+ S A +R+ G Y+++ + +
Sbjct: 72 VRL---SPGVVRAELSLESAVPVPSSGLAVAVRSVSAIGEQYVDMQPRTADGPFLADGDV 128
Query: 130 ERNQ 133
Sbjct: 129 IGPD 132
>gi|291614202|ref|YP_003524359.1| mammalian cell entry related domain protein [Sideroxydans
lithotrophicus ES-1]
gi|291584314|gb|ADE11972.1| Mammalian cell entry related domain protein [Sideroxydans
lithotrophicus ES-1]
Length = 316
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 40/128 (31%), Gaps = 6/128 (4%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E + +G V +L + Y + + GLST +V+F
Sbjct: 14 EKRTQRFMLGAVGVMLLVLLMIAF-----KQDYFHRSTTIYF-FTPNAQGLSTGMAVKFI 67
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VG + + + + A + + L G + +E+ ++
Sbjct: 68 GFKVGSVQDVSMQPNATVRVKVALDDEYVHLIGQDAKARLIKEALVGESVVEIIPGSQQV 127
Query: 122 KTIFQIAT 129
K + +
Sbjct: 128 KQVTHNSV 135
>gi|118468362|ref|YP_884762.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118169649|gb|ABK70545.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 433
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 43/315 (13%), Positives = 91/315 (28%), Gaps = 10/315 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ S +GL V G+PVG++ + E + + + +
Sbjct: 34 RTTITAYFANS-NGLFAGDDVLILGVPVGKVKEIEPLPE---RAKVTFWVDKEFQVPADA 89
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
TA I + L I+L+ + + A +R + + + T +
Sbjct: 90 TAAILSPQLVTGRAIQLTPPYESGPELPDDAVIPIERTAVPVSWDDFRVQLEKLTRTLQP 149
Query: 158 -----ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
S I +N+ + +S + H D + T
Sbjct: 150 ETPGGTSALGNFINTAADNLRGEGDNIRDALVKLSKTVTTVSDHKDDVFSTLNNLATLVS 209
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + + + A+ +++ + I ++ V V+ V T+
Sbjct: 210 ALRDSTDVLAALNRNMAAVSALLADSPDEVGQAIADLNSLAVDVKSFVVENRDAVGTTSD 269
Query: 273 TFQEVGQKIDHLLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ + L D S T A NI + + + AI +D I
Sbjct: 270 VSASISTALVQSLDDIKQSLHIFPTTLANFGNIYEPANGSLTGALAINNFSDPISFICGA 329
Query: 332 INTIENITSNLNDSS 346
I + + +
Sbjct: 330 IEAASRLGAERSAKL 344
>gi|118466050|ref|YP_881031.1| virulence factor Mce [Mycobacterium avium 104]
gi|118167337|gb|ABK68234.1| virulence factor mce family protein [Mycobacterium avium 104]
Length = 475
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 39/131 (29%), Gaps = 4/131 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
V V +++P GL ++V + G VG++ +
Sbjct: 2 AVVALAGVGLMIFPVLKLHEKWLGVGRYTVTVQLPE-AAGLYERANVTYRGYNVGQVQSV 60
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L AK L+ DT + A + + G YI+L + +
Sbjct: 61 QL---TDTGVEAKVLLNSDTKIPSEVNAEVHSVSAIGEQYIDLLPRSADAPPLKNGDVIA 117
Query: 132 NQRAMITATPS 142
R + S
Sbjct: 118 RDRTTVPPNIS 128
>gi|168702074|ref|ZP_02734351.1| putative ABC transport system substrate-binding protein [Gemmata
obscuriglobus UQM 2246]
Length = 393
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ ++GL V+ L + I ++ E+ P ++ + VR G
Sbjct: 6 SRRQAVALGLVVLVALTLGGYGITCIADKQGVWADTVELTAGFPE-AHDITPGTPVRLRG 64
Query: 63 IPVGRIVGLF-LDQEYPNH-SLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLR 118
+ G++V + D + P + I+ LY A + GL G I +
Sbjct: 65 VDAGQVVAVEYPDHDGPGAEVTVRMKIQARYASRLYADADAQVHGTGLLGSKVISVRPGD 124
Query: 119 KEKKTIFQI 127
K +
Sbjct: 125 PTKGVLAGG 133
>gi|326333291|ref|ZP_08199538.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948935|gb|EGD41028.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 410
Score = 68.4 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/338 (9%), Positives = 93/338 (27%), Gaps = 15/338 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ V+ + + DGL V+ G+ VGR+ + + + +
Sbjct: 24 GGYYTVKDTRSTVLTAVFSNADGLYEGDDVKVLGVAVGRVTEVDPQDDG---VHVRIEVE 80
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
+ A I + L +++LS + + + R A P +
Sbjct: 81 GGQRIPAEANAAIVSPSLVSGRFVQLSPAYTDGPAMPDGGQIQLDRT---AVPVSFDEVK 137
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + ++ Q + IE + + + +
Sbjct: 138 KQLTDLATALAPDGSGKQPLRTAIETLDANLRNGNAEQLSEAVEGLRSATATLSDGRADM 197
Query: 209 HSSDSKNTFNTIT--------DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
++ S T T + A+ ++ + I+ S V + +
Sbjct: 198 FTTVSNLNSFTKNLAVNDAAVAGFTEQLSEVSAVLAANRRELTKAIEELSAALVATGELT 257
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
+ ++ + + + + + ++ + T+ + +++
Sbjct: 258 HDNRGRIKNSVRDLNLLSAALADRSNQLAAILHMAPTALIDL-FNVIDKQAITGRASLTG 316
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ D Q + + D+ +L+
Sbjct: 317 LNDAAQLVCGAVLGAGGTAQQCRDALAPLVDLIKTAQQ 354
>gi|224133242|ref|XP_002327995.1| predicted protein [Populus trichocarpa]
gi|222837404|gb|EEE75783.1| predicted protein [Populus trichocarpa]
Length = 364
Score = 68.4 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/114 (18%), Positives = 39/114 (34%), Gaps = 2/114 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS S+ WL + G+ T + VR G+ VG +V
Sbjct: 82 VGLFLVSGAVLVALSLAWLRGFLLRSQFRKYTAVLEFAQASGICTGTQVRIRGVTVGEVV 141
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ + + + + ++ + GL T I+++
Sbjct: 142 RVNPSLKSIEAV-VEVEDDKNF-IPKNSLIEVNQSGLLMETMIDITPRDPIPTP 193
>gi|89055210|ref|YP_510661.1| hypothetical protein Jann_2719 [Jannaschia sp. CCS1]
gi|88864759|gb|ABD55636.1| Mammalian cell entry related protein [Jannaschia sp. CCS1]
Length = 151
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 1/118 (0%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
+ + + S S + S +G+ + VR G+ +G + G+ L+
Sbjct: 16 VVFAAAIGFFDYASGSGAATSAERYELQATFQSAEGIGIGTEVRLGGVQIGTVTGMALNP 75
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
E + + L T +I ++ L G +Y+E+ Q
Sbjct: 76 ETF-LAETTFSVSNAIALPDDTAISIASESLLGGSYVEIIPGTSPFNLEAGGEILDTQ 132
>gi|319778666|ref|YP_004129579.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Taylorella equigenitalis MCE9]
gi|317108690|gb|ADU91436.1| Uncharacterized ABC transporter, periplasmic component YrbD
[Taylorella equigenitalis MCE9]
Length = 165
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 36/99 (36%), Gaps = 1/99 (1%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP 78
F N Y ++ +V L + +++R NG+ VGR+ + D
Sbjct: 19 IALAFLALKAGNLNTYSFEKTYRVVAKFDNVGSLKSRAAIRSNGVVVGRVNSVEFDNADF 78
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ T+ATI T G+ G YI L+
Sbjct: 79 KGV-VYLDLNEKFKFPMDTSATIMTSGILGEQYIGLTPG 116
>gi|116620393|ref|YP_822549.1| hypothetical protein Acid_1270 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223555|gb|ABJ82264.1| Mammalian cell entry related domain protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 339
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/292 (10%), Positives = 81/292 (27%), Gaps = 6/292 (2%)
Query: 4 KNYYTSVGLFVVSILF-FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ + + V++ +I +L P A + I + GL++ S VR +G
Sbjct: 6 RVNWAKFRVLAVAVAASLILGTISYLLTGGTIFEPKARLYIYM-DDATGLASGSPVRVDG 64
Query: 63 IPVGRIVGLFLDQEYP--NHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLR 118
I VG++ + L + D + +TA T G ++++++
Sbjct: 65 IGVGKVDLVELSGSNDPQRVVRVSVKVDRDRLDAITTDSTAQASTDSPIGDKFVDITSGV 124
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + + E + L T
Sbjct: 125 NPQHLQPGAEITFKGTPELMKSIDLATFQKKIHEIELLLDDVEQARSPLGKFIAGEELYT 184
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ N + + + T D + + + Q
Sbjct: 185 ELNNKIRALQQSMHAAADTTSAVGQALYTDKLYRQAMEPLQRLDESLAKLQSGQGSMGQM 244
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + D+ + Q +++ ++++ ++ +
Sbjct: 245 LRDGQQYASALGQVGELRNSIASMKRADMMNSDQMHRDLSRQVETMIQAVDT 296
>gi|15828395|ref|NP_302658.1| putative secreted protein [Mycobacterium leprae TN]
gi|221230872|ref|YP_002504288.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|13093825|emb|CAC32123.1| putative secreted protein [Mycobacterium leprae]
gi|219933979|emb|CAR72691.1| putative secreted protein [Mycobacterium leprae Br4923]
Length = 519
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 83/283 (29%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
GL V ++ + + GL+ VR G+ V
Sbjct: 8 NRLRSGLIGVLVVLLIIGVGQSFTSVPILFARPSYY--GQFTDTGGLNKGDKVRIAGMDV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ L +D + H + K I + + ++ IRT + G +E+ T +
Sbjct: 66 GKVEALKIDGD---HVVIKFSIGTN-RIGTASRLGIRTDTVLGKKVLEVETRGTQLLRPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + I S + + + I+ L+ + +
Sbjct: 122 DSLPLGQSTTPYQSYDAFFDATKVASGWNIDTIKQSLKVVSETIDQTYPHLSAALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ + + T + V+ +L N
Sbjct: 182 FSDTIGARDKEIKHLIAQANQVASVLGDRGAQVDRLLVNTKTLIAAFNERGRAVDALLGN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + + + N H + + Q + Q D L +
Sbjct: 242 VAAFAAQVQRLINDNPNLNHVLEQLHQLSGILVQHKDDLANTL 284
>gi|240169179|ref|ZP_04747838.1| virulence factor Mce family protein [Mycobacterium kansasii ATCC
12478]
Length = 482
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/266 (10%), Positives = 81/266 (30%), Gaps = 9/266 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ +V + +P S GL D +V + G+ VGR+ + L+ A ++ DT +
Sbjct: 37 FGIGHYQVTVNLPSS-GGLYKDGNVTYRGVEVGRVEDVRLNG---GGVDAVLSLKSDTKI 92
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ A + +Q G +IEL + + A + + A+
Sbjct: 93 PANVDANVHSQTAVGELFIELVPRSGDGPKLKDGDVIPADHATLPP-----DINTLLAQT 147
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + ++ +I+ + + I + + + S
Sbjct: 148 NAGLQAIPHGDLKTVIDESYTAIGGLGPELARIVKGATTLAADARANLDSLTTVIDQSKP 207
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ A +++ + ++ + ++ + + ++ T
Sbjct: 208 VLDSQINSSDSIRAWAANVAEVTRQLQEQDPALKGVLDRGPAATTEARQLIDRLKPTLPV 267
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSA 299
++ + + ++
Sbjct: 268 VLANLVNLEQVAVTYQPSLEQILVLF 293
>gi|269124782|ref|YP_003298152.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268309740|gb|ACY96114.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 355
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 36/126 (28%), Gaps = 4/126 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+ L V + + + + GL+ V+ G PVGR
Sbjct: 14 LLIKLIVYVAVTGLLTAFIGAQIAKVSLSGGWSLSATF-DDASGLARGDQVKIAGAPVGR 72
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + + + K +R + +TA IR + G + L
Sbjct: 73 VDEVKVV---DGKARVKMTVRDSVKIPADSTAAIRWRDAMGQRVVYLIPGSSTTMMRPGA 129
Query: 128 ATERNQ 133
R +
Sbjct: 130 HISRTK 135
>gi|240948314|ref|ZP_04752700.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Actinobacillus minor
NM305]
gi|240297353|gb|EER47894.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Actinobacillus minor
NM305]
Length = 173
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFV+ L F ++ + + ++ GL + ++ G+ VG
Sbjct: 8 EFWVGLFVLLGLIALAFLGLRVANVQGFSSEKTYTLYATFDNIGGLKVRAPIKVGGVVVG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKE 120
R+ + LD + + D + +++ +I+T GL G YI L+
Sbjct: 68 RVSDIQLDSQTYTP-KVTLAVNEDFNKIPDTSSLSIKTAGLLGEQYIALNVGFMM 121
>gi|254818331|ref|ZP_05223332.1| virulence factor mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 475
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/305 (10%), Positives = 85/305 (27%), Gaps = 14/305 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +V + L + ++ N + G I + + VR +G+
Sbjct: 10 RKRLAAVTAVALVGLLLAGAAVVV---RNTFFGQKT--ITAYFTTATAIYPHDEVRVSGV 64
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG I + + + D P+ A I L Y++L+ ++
Sbjct: 65 KVGTIKSIQPQG---TQAKMILKVDHDVPIPADAKAVIVASNLVSARYVQLAPAYRDSGP 121
Query: 124 IFQIA--TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + + A+ + A + K S + + I++ L
Sbjct: 122 VMRDGAVIPVERTAVPVEWDEVKTQLMRLATDLGPKSGVSGTSVGRFIDSAANALDGNGD 181
Query: 182 NIETISTVLANNISHID----KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ L+ + ++ + + N + + ++
Sbjct: 182 KLRQTLGQLSGVGRILANGSGNIVDIIKNLQTFIGALRDSNVQIEQFNGRLATLTSVVND 241
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + S + + T + E +V Q + D + + +
Sbjct: 242 SKSDLDAALTDLSTAVGEVQRFIAGTRNQTSEQIARLADVTQNLVDHHLDLENILHAAPN 301
Query: 298 SAFLE 302
+
Sbjct: 302 AFGNF 306
>gi|197336293|ref|YP_002155153.1| toluene tolerance protein TTG2C [Vibrio fischeri MJ11]
gi|197317783|gb|ACH67230.1| toluene tolerance protein TTG2C [Vibrio fischeri MJ11]
Length = 164
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 2/129 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VGLFV++ + + ++ + ++ L + S V+ G
Sbjct: 4 TRKVEFFVGLFVLAGMAALLMLLLKVADVRSGGSGEYYTLNAQFDNIGSLKSRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +GR+ + LD+E I ++ A I T GL G YI + ++
Sbjct: 64 VVIGRVDNITLDKESYLPI-VSMQIDKQFGAFPETSAAQILTSGLIGEQYIGIVPGFIDE 122
Query: 122 KTIFQIATE 130
+
Sbjct: 123 DIDMLGNGD 131
>gi|330828285|ref|YP_004391237.1| paraquat-inducible protein B [Aeromonas veronii B565]
gi|328803421|gb|AEB48620.1| Paraquat-inducible protein B [Aeromonas veronii B565]
Length = 549
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/399 (6%), Positives = 96/399 (24%), Gaps = 26/399 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L S + + G +G++ E D + ++ + ++
Sbjct: 172 LGEGSPINYQGFTIGQVEEAKFLPEKSEMQYQIFIHAPYDILVSSNSRFWMTPGFEVSMS 231
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ +++ + + +
Sbjct: 232 SEGMKVKMDSLESLIDGGITMGLPP-----------------GWAPGEPVKQMEGFTLFQ 274
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ L ++ + +N+ + + I D + K
Sbjct: 275 DEASVLAGSLDQFIDYVFLFDDNVGGLHPGAAVQYRGIRVGTVISAPYLIEDKGVQIFKS 334
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L ++ + + + + + + + + D +
Sbjct: 335 RQIPVLARIEVQRLSHRYAKAEKDQWRALFGKQFKEGLRASLKTSSLLT--GGKIIDLNF 392
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + E + + +N S
Sbjct: 393 YPDAPRFEQAKLAGYQVFPTV-QGGLDQIERKVNLILDKFVDMDMATTLTKVNGSLTTLD 451
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ I+ +SA + Q+ + ++ +++ + + + D++
Sbjct: 452 GTLKNISAVSANLNKLTAKDSTQQLPASLNESLKQLQETLQAY-----DAQSQTNQDLRQ 506
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
V+ L + + +++ P +++ R S K
Sbjct: 507 SVQTLNQLMRELQPLVHSLNEQPSSLIFDRAHPSDPEPK 545
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/270 (13%), Positives = 91/270 (33%), Gaps = 12/270 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ + +V GL ++V++ GI VG ++ E I +
Sbjct: 286 QFIDYVFLFDDNVGGLHPGAAVQYRGIRVGTVISAPYLIEDKG-----VQIFKSRQIP-- 338
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A I Q L ++ + + + +F + RA + S + +
Sbjct: 339 VLARIEVQRL---SHRYAKAEKDQWRALFGKQFKEGLRASLKT--SSLLTGGKIIDLNFY 393
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + + + + IE ++ + +D T+V + T
Sbjct: 394 PDAPRFEQAKLAGYQVFPTVQGGLDQIERKVNLILDKFVDMDMATTLTKVNGSLTTLDGT 453
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
I+ + +L+K+ Q++ L +++ D T D+R++ QT +
Sbjct: 454 LKNISAVSANLNKLTAKDSTQQLPASLNESLKQLQETLQAYDAQSQTNQDLRQSVQTLNQ 513
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ +++ L+ + + S + +
Sbjct: 514 LMRELQPLVHSLNEQPSSLIFDRAHPSDPE 543
>gi|41406208|ref|NP_959044.1| hypothetical protein MAP0110 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41394556|gb|AAS02427.1| hypothetical protein MAP_0110 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 348
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 68/258 (26%), Gaps = 7/258 (2%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ L + + GI VG + + L + H A +R
Sbjct: 40 GIKLLGVGYTHYTAEFLQAAT-LRPGNPITVAGIEVGHVTSMKLAGD---HVEAGLSVRD 95
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA---TPSGINY 146
+ PL T A I+ + G Y+EL I + + +
Sbjct: 96 NVPLGKDTRAVIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTF 155
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+++ ++ ++ + + + + + + + + +
Sbjct: 156 EQVDSDQFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNT 215
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + + +A + E + V + + +
Sbjct: 216 LRNQQSNIGHLMDQGQDLLGHLVARQATFHAMFAALTELVDQLDKIVVNNRPMLDELFAN 275
Query: 267 VRETTQTFQEVGQKIDHL 284
+ + T + + ++
Sbjct: 276 LHQLTNMVGQHDDLVRNI 293
>gi|328880854|emb|CCA54093.1| virulence factor mce family protein [Streptomyces venezuelae ATCC
10712]
Length = 348
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 5/187 (2%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
G GL T VR G+ VG + + LD + D +
Sbjct: 41 LVGGGTTYSADFTE-AAGLDTGDEVRVAGVKVGEVTEVALDG---AKVKVSFEV-GDAWV 95
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+TA I + L G Y+ L L E++ + + T + + +
Sbjct: 96 GDRSTAAIAIKTLLGEKYLALDPLGSERQDPRTRIPQSRTTSPYDVTQAFQDLSGTVDAI 155
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
++K+++S I +N + + +S ++ + + +++ ++ + ++
Sbjct: 156 DTEKLAESFETISDTFKNSPPHVRNAATGLSELSRSVSKRDAELARLLRNSKQFTKTLEN 215
Query: 214 KNTFNTI 220
K +
Sbjct: 216 KKSSFET 222
>gi|294816019|ref|ZP_06774662.1| Putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
gi|326444361|ref|ZP_08219095.1| putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
gi|294328618|gb|EFG10261.1| Putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
Length = 409
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 44/133 (33%), Gaps = 5/133 (3%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M + + V+++L F + + + V+ GL T S+V
Sbjct: 1 MITPAIRLKNLAFLVIAVLVLGFVGVRYADLGHHIGIRDHYVVRVQLERTGGLFTHSNVT 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ G+ VGR+ L L + A+ I+ P+ A + G YI+L
Sbjct: 61 YRGVSVGRVGPLRLTDDG---VEAELRIQKSAPPIPADLEAVVANLSAVGEQYIDLRPRG 117
Query: 119 KEKKTIFQIATER 131
+
Sbjct: 118 TGGPHLGDGTVIA 130
>gi|212711088|ref|ZP_03319216.1| hypothetical protein PROVALCAL_02157 [Providencia alcalifaciens DSM
30120]
gi|212686256|gb|EEB45784.1| hypothetical protein PROVALCAL_02157 [Providencia alcalifaciens DSM
30120]
Length = 187
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG F++ + F ++ + +V GL S ++
Sbjct: 1 MQSKKSEIWVGCFMLLAIAAIVFLCLKVADLQSIGSQSTYRVSASFENVGGLKVGSPIKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ G+ LD++ + + + + S++ +IRT GL G YI ++
Sbjct: 61 GGVVVGRVAGISLDKKSY-VPDVQIDLLSEYDNIPDSSSLSIRTSGLLGEQYIAMNIGPY 119
Query: 120 EKKTIFQIATERNQ 133
++ + E +
Sbjct: 120 DEDMGISMLKEGGR 133
>gi|108798628|ref|YP_638825.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867724|ref|YP_937676.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|120401539|ref|YP_951368.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|126434225|ref|YP_001069916.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|315441859|ref|YP_004074738.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|108769047|gb|ABG07769.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693813|gb|ABL90886.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|119954357|gb|ABM11362.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|126234025|gb|ABN97425.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|315260162|gb|ADT96903.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 484
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 4/133 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
SK + +F + + + +L + G + L D++V +
Sbjct: 4 SKRVRLQLAIFAMVTVVAGGSMAFAYLRLPSLLFGVGRYQVTMKLQDAASLYRDANVTYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A ++ DT + A + +Q G +++L +
Sbjct: 64 GTTVGRVSDVRL---SDAGVDAMLSLQSDTKIPADLDAHVGSQTAVGELFVDLVPRSGDG 120
Query: 122 KTIFQIATERNQR 134
+ R
Sbjct: 121 APLKNGDVIPADR 133
>gi|294632695|ref|ZP_06711254.1| virulence factor Mce family protein [Streptomyces sp. e14]
gi|292830476|gb|EFF88826.1| virulence factor Mce family protein [Streptomyces sp. e14]
Length = 365
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/260 (13%), Positives = 73/260 (28%), Gaps = 12/260 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G GL VR G+ VG++ G+ LD + +
Sbjct: 59 GGGTAYSADFSE-AAGLDKGDEVRVAGVKVGKVTGVSLDGD---KVKVTFE-TKGAWIGD 113
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
TTA I + L G Y+ L + + R + T S + + + S
Sbjct: 114 RTTAAIAIKTLLGDKYLAL-------DPLGTARQDPGSRIPLDRTTSPYDVTQAFQDLGS 166
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ ++ + K E I + + ++ +T L+ + + S
Sbjct: 167 TVDAIDTKQLAKSFETISQTFKDSPPDVRNAATGLSALSRTVSERDQELSRLLQGSQRFT 226
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
L ++ + I+ + Q+ D
Sbjct: 227 KTLQNKKSSFETLIEDGGSLLGELQDRRDAIRALLTGSRALATQLSGLTEDNDRQLGPTL 286
Query: 276 EVGQKIDHLLSDFSSKMKSK 295
+ ++ +L +++
Sbjct: 287 KALGRVTDVLDANRTQLDRT 306
>gi|223937197|ref|ZP_03629104.1| Mammalian cell entry related domain protein [bacterium Ellin514]
gi|223894219|gb|EEF60673.1| Mammalian cell entry related domain protein [bacterium Ellin514]
Length = 430
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 46/407 (11%), Positives = 105/407 (25%), Gaps = 43/407 (10%)
Query: 1 MESKNYYTSVGLFVVSIL----FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
ME +VG FV+ + +Y +++ + GL
Sbjct: 17 MER-----AVGWFVLLATLLLLGGFAYYLYTTAKNKGWFLIKVPYYT-FTDRATGLKVGD 70
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V+ G+ VG I + Y L I+
Sbjct: 71 PVQLMGLSVGHITDIQPQPPYD---------------------------LEHNICIDFVI 103
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ ++ + A ++ N S H + E P
Sbjct: 104 VHPYDGYLWTEGSHAKVTAAALDLLGKRVVEVTKGTNGYPTYIFSPLHTNTMAEIERLPN 163
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ + V+ +N + + K + +T T+ +
Sbjct: 164 REEYVLAQEVWAVVNSNSTMVAKALLPLTNGVLEKIRPYVTAGLTITPTNQQRNKLMAVW 223
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
N N + D+ + + I L + S+ + +
Sbjct: 224 DDHNAWYVAFNG-RNRYGLVPDESPALTDRAERLVASVEAALPNILGLTNQLSATLSNSA 282
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ N+ + + Q Q + N+ L+ + +S
Sbjct: 283 SMTSNLNVVAQSIQPVITNMTFITAQLQGQGTLGDWLIPTNMHRQLDVTLTNVNTTVSDA 342
Query: 357 NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
++ L + ++++ D + +N + + N L + S +
Sbjct: 343 DS-----NLVVLAESLTKSLNNLADVTSNLNGQVQANTNILTHLSDT 384
>gi|145225113|ref|YP_001135791.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145217599|gb|ABP47003.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 487
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/323 (9%), Positives = 89/323 (27%), Gaps = 9/323 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
Q+ P ++ S + VR G+ VG I + + I D
Sbjct: 32 YQQFFSPYT--VVAYFRSATAIYAGDEVRVAGVRVGTIESIEPQG---TRAKMTMAIDHD 86
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR--AMITATPSGINYFI 148
P+ A I L Y++L+ TA P +
Sbjct: 87 VPVPADAEAIIVAPNLVSARYVQLTPAWGATPETSGPTMVDGAEIGQDRTAVPVEWDEIK 146
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ ++ S + + + + +S + +++
Sbjct: 147 QQLTRLATELGPSGGVSETSLGRFIDTTAAAMDGNGNKLRETISQLSGVARVLGEGSGDI 206
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ +++ + L V Q+++ + N+ + + + + V
Sbjct: 207 VEVITHLETFVTALRDSNVQIVQFQDRLADVTQVVDGSRSELNSAITTLSEAVGEVQRFV 266
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
E +++ + +++ L + + + A + +I +
Sbjct: 267 EGSRS--QTAEQVQRLANVTQVLADDSLVLKNILHAAPNALVNGYNIYNPDTGGPRGSFA 324
Query: 329 ISTINTIENITSNLNDSSQKFAE 351
++ + + + + +
Sbjct: 325 MNNFSNPVTLICSAIAAVENVTA 347
>gi|54027078|ref|YP_121320.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018586|dbj|BAD59956.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 413
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 33/97 (34%), Gaps = 4/97 (4%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ SV G+ S VR G+PVG + + + + D +
Sbjct: 38 TTRITAYFDRSV-GIYEGSDVRILGVPVGSVESVEPQGD---QVKVVLAVDGDYDVPADA 93
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A T + YI+L+ + + + T +R
Sbjct: 94 QAAQITPSVVADRYIQLTPVYTGGPKMDRNGTIPRER 130
>gi|152996943|ref|YP_001341778.1| hypothetical protein Mmwyl1_2932 [Marinomonas sp. MWYL1]
gi|150837867|gb|ABR71843.1| Mammalian cell entry related domain protein [Marinomonas sp. MWYL1]
Length = 548
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 92/388 (23%), Gaps = 23/388 (5%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L + V F G VG + + D E + D + + G++
Sbjct: 169 LDVGALVHFRGYEVGYVEKVGFDTEKGAITYRVVIRSPYDALVNSDVQFWMTP----GLS 224
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ ++ + + + + + A +S+ +
Sbjct: 225 FKSSASGFEVRLDSLETFFAGGISFGLPPGRTAGQPVKDMAPFRLFSSKESAANNMFSEF 284
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
L + + T + I ++ + + + ++
Sbjct: 285 INYVFLFESNISGLTPGAAVEFRGVRIGTVLDVPFNGIPMDSLTSFDTPLIPVRARIEPQ 344
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
L+ + + + + + + + +
Sbjct: 345 RLNSLDTSGAMSLQKWNELIEDRINKGVRASLKIGNYLNGAKVINI------DFMKNPPP 398
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + A + + + T + + N++ ++
Sbjct: 399 VTIKEFAGYQIFPTAPDAFANIETKVGTILDNVSQVPLNKTFEQLGQTMNEANETLRQLQ 458
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
EL + + E L D ++ T E + ++
Sbjct: 459 ELSKSVKQLIDKSETQQLPADLAATINELNLTLETYQA------------NGQIGRPLKE 506
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ L +N L NP +++
Sbjct: 507 NMVSLGRALNELQPLLRQLRENPNTLIF 534
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/269 (13%), Positives = 86/269 (31%), Gaps = 12/269 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S +N + ++ GL+ ++V F G+ +G ++ + + +L
Sbjct: 275 SAANNMFSEFINYVFLFESNISGLTPGAAVEFRGVRIGTVLDVPFNG-----IPMDSLTS 329
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
DTPL P A I Q L + +L+K + ++ I ++
Sbjct: 330 FDTPLIP-VRARIEPQRLNSLDTSGAMSLQKWNE------LIEDRINKGVRASLKIGNYL 382
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ A+ + + + + T I T + + ++ ++
Sbjct: 383 NGAKVINIDFMKNPPPVTIKEFAGYQIFPTAPDAFANIETKVGTILDNVSQVPLNKTFEQ 442
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T+ L + + ID + Q+ ++ + N + + R
Sbjct: 443 LGQTMNEANETLRQLQELSKSVKQLIDKSETQQLPADLAATINELNLTLETYQANGQIGR 502
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ +G+ ++ L ++ T
Sbjct: 503 PLKENMVSLGRALNELQPLLRQLRENPNT 531
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 44/462 (9%), Positives = 116/462 (25%), Gaps = 44/462 (9%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ L + L + + +Y Q VI + + DGL + ++
Sbjct: 15 RFNSIW--LVPLIALLVAGWMLY------QNWSSQGPVITLLAANADGLEIGKTKLKSRN 66
Query: 63 IPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI-----------RTQGLAGIT 110
+ VGR++ + L ++Y N + + + L + L
Sbjct: 67 VDVGRVIDIRLSEDYENAIIKVRMNHGTEQMLRDDARFWVVKPRIGKEGVSGLGTLLSGA 126
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
YI+++ K + + + + ++ + + +E
Sbjct: 127 YIDMTPGVKGRLQTDFTLLSQPPLSTENEGVRLVLSSTEGSKLDVGALVHFRGYEVGYVE 186
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + + + D T S + + L T
Sbjct: 187 KVGFDTEKGAITYRVVIRSPYDALVNSDVQFWMTPGLSFKSSASGFEVRLDSLETFFAGG 246
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ S + N + E I L +
Sbjct: 247 ISFGLPPGRTAGQPVKDMAPFRLFSSKESAANNM--FSEFINYVFLFESNISGLTPGAAV 304
Query: 291 KMKSKETSAFLE-NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ + L+ + +S R + + + +L ++
Sbjct: 305 EFRGVRIGTVLDVPFNGIPMDSLTSFDTPLIPVRARIEPQRLNSLDTSGAMSLQKWNELI 364
Query: 350 -AELMSKINNISALKENNSLFKDAQ------------------RAMHTFRDTSEKINRYI 390
+ + + + K + T D I +
Sbjct: 365 EDRINKGVRASLKIGNYLNGAKVINIDFMKNPPPVTIKEFAGYQIFPTAPDAFANIETKV 424
Query: 391 PSIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+I +N+ + + + ET+ + + ++
Sbjct: 425 GTILDNVSQVPLNKTFEQLGQTMNEANETLRQLQELSKSVKQ 466
>gi|254773150|ref|ZP_05214666.1| hypothetical protein MaviaA2_00491 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 348
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 67/258 (25%), Gaps = 7/258 (2%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ L + + GI VG + + L + H A +R
Sbjct: 40 GIKLLGVGYTHYTAEFLQAAT-LRPGNPITVAGIEVGHVTSMKLAGD---HVEAGLSVRD 95
Query: 90 DTPLYPSTTATIRTQGLAGITY---IELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
+ PL T A I+ + G Y + TI TE + +
Sbjct: 96 NVPLGKDTRAVIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEGPYDLQSLLEDATTTF 155
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+++ ++ ++ + + + + + + + + +
Sbjct: 156 EQVDSDQFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNT 215
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + + +A + E + V + + +
Sbjct: 216 LRNQQSNIGHLMDQGQDLLGHLVARQATFHAMFAALTELVDQLDKIVVNNRPMLDELFAN 275
Query: 267 VRETTQTFQEVGQKIDHL 284
+ + T + + +
Sbjct: 276 LHQLTNMVGQHDDLVRNT 293
>gi|226304454|ref|YP_002764412.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183569|dbj|BAH31673.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 464
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/307 (9%), Positives = 88/307 (28%), Gaps = 6/307 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M +K + +F V + ++ +V + +P + GL +S+V
Sbjct: 2 MLTKFVRIQLIIFAVLTVVGLIVMATQYVRVPAMVGIGRYDVTVELPAT-GGLYKNSNVT 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G +G + + L + A+ + + A +++ G +++L
Sbjct: 61 YRGQTIGVVNAVELSETG---VNARLSLESGVKVPSDVDAAVKSVSAIGEQFVDLIPHTD 117
Query: 120 EKKTI-FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
I E T + + S S ++ +I+ K
Sbjct: 118 SSGAIVVDGHLENGSVIPEDRTSIPQDVGAMLDQADLLLQSISDTKLKTVIDESFKAFNG 177
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+++ + + + T+ + ++ +
Sbjct: 178 AGPDLQKLIDSARLFVEEANNNSDATKTLIEQAGPLLDTQVVSSDAIRSWTSNLVTFTDQ 237
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ +++ ++ + + D++ T + + +++ ++
Sbjct: 238 LRASDPDLRAVIQKGPAAAAEANALLQDMQPTLPILLANLVSVGQVGVIYNNAIEQILVI 297
Query: 299 AFLENIA 305
A
Sbjct: 298 YPPLAAA 304
>gi|317491496|ref|ZP_07949932.1| paraquat-inducible protein B [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316921043|gb|EFV42366.1| paraquat-inducible protein B [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 546
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/407 (9%), Positives = 105/407 (25%), Gaps = 29/407 (7%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
LS V F G+ VG + D + H DT + + I +
Sbjct: 165 SEQAGQLSPGDPVLFRGLRVGSVETSQFDTKNRQIHYQVFVSAPYDTLVTDNVRFWIDSG 224
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
++ + T+F + + + + +
Sbjct: 225 VSFDMSAQGMRLEMGSLTTLFSGGVSFDVP-----------QGWAVGKPAANQSQFDLFD 273
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
Q+ I+ ++ + S + ++ + + + D
Sbjct: 274 NQRSIQESLYTEHKSVLMFFSDSIRGLQVGAPVEFRGIRLGTVAQAPYFVSGLSQKLDSD 333
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ ++ + ++ +N V + F + + ++ T +
Sbjct: 334 YQIPVLVNIEPGRIQQKLGDNFNVEQHLFSGVGEGLRASLKSANLLTGSLYIDLDFYPQA 393
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ + + + IN N
Sbjct: 394 KPWKGPRKIDGLPVVPTVSGGLAQ---LQQKLTATLDKINALPLEPMINEATNTLKASQK 450
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + + + +N + + KE +L D Q+ + + +
Sbjct: 451 TMAETQKTLDTLNKLVSSKEAQALPADMQKTLIELNRSVKGFQP------------GSPA 498
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N++ +++L + + L +V+ E + K +PK
Sbjct: 499 YNNMVGDMQRLDQVLRELQPVLRTLNEKSNSLVF--EAPAGKDPQPK 543
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 9/60 (15%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV---------GLFLDQEYPNHSLAKAL 86
V++ S+ GL + V F GI +G + LD +Y L
Sbjct: 284 TEHKSVLMFFSDSIRGLQVGAPVEFRGIRLGTVAQAPYFVSGLSQKLDSDYQIPVLVNIE 343
>gi|59711003|ref|YP_203779.1| organic solvent ABC transporter [Vibrio fischeri ES114]
gi|59479104|gb|AAW84891.1| predicted ABC-type organic solvent transporter [Vibrio fischeri
ES114]
Length = 164
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 47/129 (36%), Gaps = 2/129 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VGLFV++ + + ++ + ++ L + S V+ G
Sbjct: 4 TRKVEFFVGLFVLAGMAALLMLLLKVADVRSGGSGEYYTLNAQFDNIGSLKSRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +GR+ + LD+E I ++ A I T GL G YI + ++
Sbjct: 64 VVIGRVDNITLDKESYLPI-VSMQIDKQFGSFPETSAAQILTSGLIGEQYIGIVPGFIDE 122
Query: 122 KTIFQIATE 130
+
Sbjct: 123 DIDMLGNGD 131
>gi|189500801|ref|YP_001960271.1| Mammalian cell entry related domain-containing protein [Chlorobium
phaeobacteroides BS1]
gi|189496242|gb|ACE04790.1| Mammalian cell entry related domain protein [Chlorobium
phaeobacteroides BS1]
Length = 293
Score = 68.0 bits (163), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/124 (14%), Positives = 50/124 (40%), Gaps = 8/124 (6%)
Query: 1 MES----KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M++ K G+F V L + + + +++ + + + +V L ++
Sbjct: 1 MKNPNTLKWGDLKTGIFFVIGLGLAAYLGLVVGKNSSLFKSAITIQM-MAQNVGSLKENN 59
Query: 57 SVRFNGIPVGRIVGLFL-DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE 113
V +G +G + + ++ L + + + + + A I + G+ G Y++
Sbjct: 60 FVSVSGKKIGTVSKMEFINRNDSLFILVQMRLEEEFAPIITNDSKARIISLGILGDKYVD 119
Query: 114 LSTL 117
++T
Sbjct: 120 ITTG 123
>gi|209518420|ref|ZP_03267243.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
gi|209501141|gb|EEA01174.1| Mammalian cell entry related domain protein [Burkholderia sp. H160]
Length = 528
Score = 67.7 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 45/389 (11%), Positives = 102/389 (26%), Gaps = 35/389 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
LS S V F+G+ VG+++G L + N + + P T R +G+
Sbjct: 171 LSAGSPVYFHGVQVGQVLGYSLARGGDN---VRIGVFVRRPFDRLVTPDTRWWQASGVEL 227
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + + + + S + E
Sbjct: 228 K----------------LDSSGLRLDAPPAAALLAGGLAFDMPRGNVRAVSAVNVEDFEL 271
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ AN + V + V DL D+
Sbjct: 272 ADSRTDAMRANDGPPAVVRMRFAQSARGLSVGAPVEFRGVGVGTVTAVDIDLRPERDRFD 331
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ L L + + V E + G +
Sbjct: 332 MLVTLSLYPSRLGRNYHDALGDGAGTASKALLRRLVAEGLRGQLRTGSLLTGQKYVALDI 391
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + + +E I NL+ + ++
Sbjct: 392 FPHAPADRVDTDRSPVELPTVPNSLEELQDQLSNIVRRLDRVPLEEIGRNLDATLRQSNV 451
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L ++++ L A+ + + + N + +D+
Sbjct: 452 LFAQLDE--------QLVPAARSTLESAQRAFRSANEILDQ--------GSPVQSDVHQA 495
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +L+ T+ + ER+P+ ++WG+
Sbjct: 496 LTELRRTLAGLHALSDYLERHPEALIWGK 524
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD---QEYPNHSLAKALIRPD 90
DGP A V +R S GLS + V F G+ VG + + +D + L + P
Sbjct: 283 DGPPAVVRMRFAQSARGLSVGAPVEFRGVGVGTVTAVDIDLRPERDRFDMLVTLSLYPS 341
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 40/428 (9%), Positives = 99/428 (23%), Gaps = 27/428 (6%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQ 75
+L L+ + GP V S GL + VR+ G+ +GR+ L
Sbjct: 23 LLIAILIGALMLAPTLTQRGPRVTVSFL---SGAGLVAGKTQVRYRGVAIGRLEHLRWSV 79
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
A+ + A + G + + EK
Sbjct: 80 NG-QRVYAELRLD----------AAGQRIAKCGTKFWVVRPRIDEKNISGLSTVISGT-- 126
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
MI + A + + + P+ +++ +
Sbjct: 127 MIDVDIDVHSLRACYAFTGFDTPPGVTSDEEGARFVLRAPMLGSLSAGSPVYFHGVQVGQ 186
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ + + ++L+ + L + +
Sbjct: 187 VLGYSLARGGDNVRIGVFVRRPFDRLVTPDTRWWQASGVELKLDSSGLRLDAPPAAALLA 246
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+VR + E + D + + ++ + +
Sbjct: 247 GGLAFDMPRGNVRAVSAVNVEDFELADSRTDAMRANDGPPAVVRMRFAQSARGLSVGAPV 306
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
+ + + L S + L ++ + +R
Sbjct: 307 EFRGVGVGTVTAVDIDLRPERDRFDMLVTLSLYPSRLGRNYHDALGDGAGTASKALLRRL 366
Query: 376 MHT-FRDTSEKINRYIPSIGNNLQNF---------SQSGLNDIQNLVRKLQETVNHFDDC 425
+ R + L F + ++ + L+E + +
Sbjct: 367 VAEGLRGQLRTGSLLTGQKYVALDIFPHAPADRVDTDRSPVELPTVPNSLEELQDQLSNI 426
Query: 426 LNNFERNP 433
+ +R P
Sbjct: 427 VRRLDRVP 434
>gi|330807562|ref|YP_004352024.1| putative ABC transporter, substrate-binding component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
gi|327375670|gb|AEA67020.1| putative ABC transporter, substrate-binding component [Pseudomonas
brassicacearum subsp. brassicacearum NFM421]
Length = 155
Score = 67.7 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/118 (20%), Positives = 48/118 (40%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ + +S + ++ GL+ + V
Sbjct: 1 MQNRTLEIGVGLFLLAGILALLLLALRVSGLAPTASTDTYKLYANFDNIAGLTVRAKVTM 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + L++E + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAIDLNREDFTG-RVTLQLEKRVDNLPTDSTASILTAGLLGEKYIGISVG 117
>gi|118469321|ref|YP_885539.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118170608|gb|ABK71504.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 346
Score = 67.7 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/317 (12%), Positives = 98/317 (30%), Gaps = 10/317 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+G+ V+++ ++ + D + R + L + V GIPV
Sbjct: 17 NRLWLGVVAVAVVSVLIGAMLLV---RVADIGYTQYTARFLQAAA-LKAGNPVTVAGIPV 72
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY---IELSTLRKEKK 122
G + + L + H AK +R D L + A I + G Y +
Sbjct: 73 GEVKSMRLAGD---HVEAKIKVRNDVGLGKDSRAKIMVTTILGSRYLSLEPAGDGTLPDR 129
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
T T+ T + +++ ++ + ++ + I + L T
Sbjct: 130 TFDLSHTDVPYDLQEALTDVTTTFEKVDSDKFAETLQILGSQLETLPPVIPQALENTHTL 189
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
I+ + + + + ++ + + +A ++ +
Sbjct: 190 STIIAQRRDQLGELLKTTELISNTLYRQKSTIGSLMNQSNSLLAEFVARRATFHAMMDAL 249
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+Q S + ++ V D+R+ + + + +L +++
Sbjct: 250 TNLVQTLSGIVIDDRPELEKLVEDLRQLSSLLSKNDGMLRSILQTAPIALRNIANMTGTG 309
Query: 303 NIADSTSNMRSSISAIR 319
N D S+ + +
Sbjct: 310 NAIDFNSSSGLLVDSWM 326
>gi|317508871|ref|ZP_07966510.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316252832|gb|EFV12263.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 343
Score = 67.7 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/330 (10%), Positives = 82/330 (24%), Gaps = 18/330 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G+ + ++ + W+ + + G + G+ VR GI VG+I
Sbjct: 23 WIGVTSIIVVVSLLVATAWI-FLSPFGGRSYTAHMTTS---GGIRPGDDVRVAGISVGKI 78
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ LD + + T+ I+ G Y+ + + +
Sbjct: 79 TSVRLD---RTEVRMAFTVTSSVFVGSDTSLEIKLLTPLGGRYVAVHPEGD--TPLGEKT 133
Query: 129 TERNQRAMITATPSGINYFISNA---------ENTSKKISDSSRHIQKIIENIEKPLTTT 179
++ + P I + S+ ++++ + ++ T T
Sbjct: 134 IPSSRVVLPFTLPDIIRAAEPIVKKVDGQVIHDTFSEIAKSTNQYPDSLRNVLQATNTMT 193
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
A + + I L S + + Q
Sbjct: 194 NAMTRVENDYKKVVAIAQEYSSVLIANRHQLQTLLERAVIILRLTQSKGTELLYLISQGS 253
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + ++ V + T VGQ +D + M
Sbjct: 254 DLLRTLKRLVVFYGDTLEPVVNSIDDLFDITYAHVDRVGQALDGIGQLLRIVMPMLHGEG 313
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKII 329
N + + +
Sbjct: 314 IFLNDKNQIMDENHVEPRPDICVPNIFRQC 343
>gi|317968584|ref|ZP_07969974.1| ABC-type transport system, periplasmic component [Synechococcus sp.
CB0205]
Length = 295
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG +++ + + WL + GL+ S+V +
Sbjct: 1 MRRSVKEAIVGFTLLAAVSSAGLFWLWLKGVS-VSNRTWRFQANF-ADAAGLAPRSAVTY 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIR-PDTPLYPSTTATIRTQGLAGI 109
G+ VG + + + I P+ L A + L G
Sbjct: 59 RGVTVGHVQQVT---ATATAVEVQIDINQPNLQLPQPLDARVEAASLLGG 105
>gi|317125890|ref|YP_004100002.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
gi|315589978|gb|ADU49275.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
Length = 351
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 79/248 (31%), Gaps = 4/248 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G G+ D VR G+ VG++ G+ L+ H +I D P P
Sbjct: 41 GGGTPFSAAFTE-AGGIKPDDDVRIAGVKVGKVTGVDLEA---GHVRVDFVITEDAPFGP 96
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+T A +R + + G Y+ L + + + + + +
Sbjct: 97 TTRAAVRMKTILGEKYLALEPEGPGQLESGTQIPLARTVSSYDVITAFQDLTTTTERIDT 156
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+++S + ++ + + TT+ + +S +A + +++ T+ S+
Sbjct: 157 DALAESLTVLATEFKDSPEHVRTTLDGLSRLSRTIAGRDEQLGRLLDRTEGVTGLVASRT 216
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
L + A Q + + N + + T
Sbjct: 217 DQLQSLIEDADLLMVELARRRQDIRTLFTNTSALAQQLTGLVRDNRAQLGPALRELHTTL 276
Query: 276 EVGQKIDH 283
++ QK D
Sbjct: 277 DMLQKHDT 284
>gi|296141838|ref|YP_003649081.1| hypothetical protein Tpau_4173 [Tsukamurella paurometabola DSM
20162]
gi|296029972|gb|ADG80742.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 340
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 38/97 (39%), Gaps = 4/97 (4%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPDTPLYPST 97
+ + GL T VR G+ VG++ + L + + + D ++ ++
Sbjct: 40 YTAQFT-NASGLRTGDDVRVLGVQVGKVTSVSLQRGEGGRGSFADVAFSLDRDQRIFRNS 98
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
IR Q L G YI+L + + A+ ++
Sbjct: 99 KLAIRFQNLTGQRYIDLQRAAAPGDEVAENASITTEQ 135
>gi|145221246|ref|YP_001131924.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213732|gb|ABP43136.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 484
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 44/133 (33%), Gaps = 4/133 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
SK + +F + + + +L + G + L D++V +
Sbjct: 4 SKRVRLQLAIFAMVTVLAGGSMAFAYLRLPSLLFGVGRYQVTMKLQDAASLYRDANVTYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A ++ DT + A + +Q G +++L +
Sbjct: 64 GTTVGRVSDVRL---SDAGVDAMLSLQSDTKIPADLDAHVGSQTAVGELFVDLVPRSGDG 120
Query: 122 KTIFQIATERNQR 134
+ R
Sbjct: 121 APLKNGDVIPADR 133
>gi|297190646|ref|ZP_06908044.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|297150574|gb|EDY63781.2| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 369
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/337 (11%), Positives = 91/337 (27%), Gaps = 14/337 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG+ + ++ S + I G+ S +R G+ VG +
Sbjct: 6 IVGI----GAGLAVVAVAGTSGAMALKESGTTRITAYFERATGVYEGSDLRVLGVKVGTV 61
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + L+ D + A + + YI+L+ + I A
Sbjct: 62 DTVRPEGD---KVRVTLLLDEDVDVPKDAHAVVVAPSVVADRYIQLAPAYTGGERIKDGA 118
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+R A P ++ ++ S + + + +
Sbjct: 119 VLPAERN---AMPLEVDQLYASITELSTALGPEGAGADGALAGLLDTGAANLEGNGKAIG 175
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT----DLITSLDKMIKAIDLQKVNQILE 244
K + + ++ S T D + + A + + E
Sbjct: 176 DSIEQFGKAAKTLDGSSGDLFATLSYLQSFTAMLKKNDGNVAKAEKQLASVTGFLAEDKE 235
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
N+ + + QV + D R + + + + L D + + +A L
Sbjct: 236 NLGAALKELGTALGQVKGFIQDNRGSLKKNVDALVPLTRTLVDQRASLAEAMDTAPLAAG 295
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
++ + + I + S
Sbjct: 296 NALSAYDPVNRTLNGRADINELSYGPEITVPPDTVST 332
>gi|118464334|ref|YP_879400.1| virulence factor Mce [Mycobacterium avium 104]
gi|118165621|gb|ABK66518.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 348
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 68/258 (26%), Gaps = 7/258 (2%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ L + + GI VG + + L + H A +R
Sbjct: 40 GIKLLGVGYTHYTAEFLQAAT-LRPGNPITVAGIEVGHVTSMKLAGD---HVEAGLSVRD 95
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA---TPSGINY 146
+ PL T A I+ + G Y+EL I + + +
Sbjct: 96 NVPLGKDTRALIKVMTILGSRYLELVPDGPGSLPANTIPLAHTEVPYDLQSLLEDATTTF 155
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+++ ++ ++ + + + + + + + + +
Sbjct: 156 EQVDSDQFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGALLKSTQRVVNT 215
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + + +A + E + V + + +
Sbjct: 216 LRNQQSNIGHLMDQGQDLLGHLVARQATFHAMFAALTELVDQLDKIVVNNRPMLDELFAN 275
Query: 267 VRETTQTFQEVGQKIDHL 284
+ + T + + ++
Sbjct: 276 LHQLTNMVGQHDDLVRNI 293
>gi|271501397|ref|YP_003334422.1| mammalian cell entry related domain-containing protein [Dickeya
dadantii Ech586]
gi|270344952|gb|ACZ77717.1| Mammalian cell entry related domain protein [Dickeya dadantii
Ech586]
Length = 544
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 46/394 (11%), Positives = 93/394 (23%), Gaps = 34/394 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ L +S + + IPVGRI L ++ I D P TA R +
Sbjct: 167 DDLGSLDINSPIYYRRIPVGRITSYQLRKDGKG---IDLDIFIDAPYDRLVTADSRFWNV 223
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+G+ S + K PS + Q
Sbjct: 224 SGVDLSVGSDGFQLKTQTVAAIMAGGIAFSTPEGPS-----------------HGVLYKQ 266
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ T + + V S + D
Sbjct: 267 ARYKLAPDEETAMAPADGPPVRFQLRFEHTLHGLNVGAPVEFSSVRIGRVASIELDYNAE 326
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + I K + + T+ G + S
Sbjct: 327 GYRFPIVV------GIDVYPSRMGKVLEKLPKPTGDVDLNTAIFTREMIANGLRAQATSS 380
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + + + + + I
Sbjct: 381 SLLTGQLYISLDFIPDAPKVKFDVTKRPVELPTINSGLSILQDQITDITRKINKMP---- 436
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
E+ S +N S ++ +L R + ++ + N L S +
Sbjct: 437 --LDEIGSNMN-TSLVELTKTLRMVNARTLPAANRLIQQAQFTTQDVQNLLVEDSPLMVT 493
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +++ T+ N +R+P+ ++ GR
Sbjct: 494 -LLRSLQEATRTLRTVRSLTNQLDRHPESLIQGR 526
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPD 90
DGP +R ++ GL+ + V F+ + +GR+ + LD + + + P
Sbjct: 283 DGPPVRFQLRFEHTLHGLNVGAPVEFSSVRIGRVASIELDYNAEGYRFPIVVGIDVYPS 341
>gi|119717045|ref|YP_924010.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119537706|gb|ABL82323.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 404
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 41/372 (11%), Positives = 104/372 (27%), Gaps = 26/372 (6%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ D V P +V + S VR G+ VGR+ + + +
Sbjct: 32 RDDTATKTVSAHFPRAVS-IYEGSDVRILGVNVGRVTAVTPEGNS---VRVDMEYDAEYQ 87
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ A I T L +++L+ E + + I +
Sbjct: 88 VPADAQAVIVTPTLVADRFVQLTPAYAEGDRVLADGAD-------------IALPDTGVP 134
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+I S R + + + T+ ++ + + M T +
Sbjct: 135 VELDRIYASLRDLSEALGPNGVNKDGTLDHLLEAGAHALDGRGALGNRMLTRLAAAARTF 194
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + + + + + ++ + S Q+ + +++
Sbjct: 195 GEGAGPLFDTVSRLAE------FTTTLAENGKFVRAFIKDLAGVSSQLADERTEIQGALA 248
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + + D + + + + + S S +A+R +
Sbjct: 249 AVADAVGTVKSFVHDNRAALVA-DVERLTRVMKTIASEKDSIDTALRVAPVAIGNLSLAY 307
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
N+ + S + + + + KD + F+ E + +P+
Sbjct: 308 NSRSGTIGSRIGISGNVWDADGFLCAVVQQSSLSRASKDLACTL--FKQLLEPVEGQVPT 365
Query: 393 IGNNLQNFSQSG 404
I S +G
Sbjct: 366 IPPGPDGRSSTG 377
>gi|156934562|ref|YP_001438478.1| paraquat-inducible protein B [Cronobacter sakazakii ATCC BAA-894]
gi|156532816|gb|ABU77642.1| hypothetical protein ESA_02396 [Cronobacter sakazakii ATCC BAA-894]
Length = 546
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/413 (9%), Positives = 105/413 (25%), Gaps = 30/413 (7%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTT 98
+ + + + G L+ V F G VG + D + + S D + +
Sbjct: 158 IRVILDSNKAGQLNPGDPVLFRGYRVGSVETSTFDPQKRSISYQLFINAPNDRLVTSNVR 217
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ ++ + T+F P G AE T+ +
Sbjct: 218 FWKDSGIAVDLSSSGMRVEMGSLSTLFSGGV-------SFDVPDGWELGQPVAEKTAFTL 270
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
D R IQ+ + + A ++ +
Sbjct: 271 YDDQRSIQESLYTEHIDYLMFFKDTIRGLQPGAPVEFRGIRL-------GTVAQVPFFVP 323
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ +T+ ++ + ++ + + + ++ ++
Sbjct: 324 GLHQAVTTDYRIPVLVRIEPERLANQIGEDPNITSHMHELLKKGLRATLKTGNLVTGQLF 383
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
+D + + S + I N
Sbjct: 384 VDLDFYPKAPPVTDMASFNGYPVIPTVSSGLAQIQQRLMDTLDKINNLPLNPMIEQATNT 443
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
S + ++ + +N +++ + L D Q+ + + +
Sbjct: 444 LSESQRTMRRLQTTLDNLNQLTSSQSAQELPADMQKTLRELNRSMQGFQP---------- 493
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 --GSAAYNKMVADMQRLDQVLRELQPVLRTLNEKSNALVF--ESKEKKDPQPK 542
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/269 (9%), Positives = 79/269 (29%), Gaps = 23/269 (8%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ ++ ++ GL + V F GI +G + + + ++ D +
Sbjct: 283 TEHIDYLMFFKDTIRGLQPGAPVEFRGIRLGTVAQVPFFVPGLHQAVTT-----DYRIP- 336
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
I + LA + + + + + + + +
Sbjct: 337 -VLVRIEPERLANQIGEDPNITSHMHELLKKG----------------LRATLKTGNLVT 379
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
++ K + I T+S+ LA + + P + +
Sbjct: 380 GQLFVDLDFYPKAPPVTDMASFNGYPVIPTVSSGLAQIQQRLMDTLDKINNLPLNPMIEQ 439
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
NT+++ ++ ++ +D ++ Q + K+ ++ ++ + + +
Sbjct: 440 ATNTLSESQRTMRRLQTTLDNLNQLTSSQSAQELPADMQKTLRELNRSMQGFQPGSAAYN 499
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENI 304
++ + L T N
Sbjct: 500 KMVADMQRLDQVLRELQPVLRTLNEKSNA 528
>gi|330991858|ref|ZP_08315807.1| mammalian cell entry domain-containing protein [Gluconacetobacter
sp. SXCC-1]
gi|329760879|gb|EGG77374.1| mammalian cell entry domain-containing protein [Gluconacetobacter
sp. SXCC-1]
Length = 317
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 83/296 (28%), Gaps = 8/296 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + T +G V+ + + + ++ G E ++ +GL S V F
Sbjct: 1 MADR--QTLIGAAVLGVGAIALA-VLGMTGWLPIPGRSTEAVVVFESPTNGLDIGSPVNF 57
Query: 61 NGIPVGRIVGL--FLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+PVG + + +D ++ + L P + T G+ +
Sbjct: 58 RGVPVGAVERITVRVDPADHHTYMPVYILFDPAHAPGHGDLPPLSTLLANGLRADMVLHS 117
Query: 118 RKEKKTIFQIATERNQRAMITATPSGIN--YFISNAENTSKKISDSSRHIQKIIENIEKP 175
+T + + + + + A + S+ Q + I
Sbjct: 118 LVTGQTELDLDLDPQTPQRLHPDLTDMPEIPMGQTALQQLEATLISTSVQQLHNDLITAL 177
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + + S H + + + + + +
Sbjct: 178 ASIRRLAADMDRDMPGMIASIRTTSGHADTAASQIRAAITDVTDHASVTINRLDQLISAN 237
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ +Q N ++ Q T+ +R T +D + D
Sbjct: 238 SREFVARRAELQALIGNTRQTMAQARETLASLRALTDPQSRDRLNLDATMRDVMEA 293
Score = 44.5 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 22/191 (11%), Positives = 59/191 (30%), Gaps = 4/191 (2%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
Q +H + L + S + + + +A
Sbjct: 128 DLDPQTPQRLHPDLTDMPEIPMGQTALQQLEATLISTSVQQLHNDLITALASIRRLAADM 187
Query: 315 ISAIREITDQRQKIISTINTI-ENITSNLNDSSQKFAELMSKINNI--SALKENNSLFKD 371
+ + + +T I + + D + + +++++ + + +E + +
Sbjct: 188 DRDMPGMIASIRTTSGHADTAASQIRAAITDVTDHASVTINRLDQLISANSREFVARRAE 247
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
Q + R T + + S+ S+ L ++ +R + E E
Sbjct: 248 LQALIGNTRQTMAQARETLASLRALTDPQSRDRL-NLDATMRDVMEAGYGLRGFATEVES 306
Query: 432 NPQDIVWGREK 442
NPQ ++ G +
Sbjct: 307 NPQLLLMGHNQ 317
>gi|54024943|ref|YP_119185.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54016451|dbj|BAD57821.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 339
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 8/108 (7%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ V ++ F ++ +++ GL VR G+
Sbjct: 20 RAQTVW--ALVSVVVLALAFGAVAALYTHPPGSHTHRMLLPET---GGLGVGDGVRIAGV 74
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
PVGR+ + L + D L T A IR G Y
Sbjct: 75 PVGRVTAVRL---GEGQVEVSFTVDADRHLGDRTAADIRMLTPVGGLY 119
>gi|326775345|ref|ZP_08234610.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
gi|326655678|gb|EGE40524.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
Length = 416
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/278 (11%), Positives = 85/278 (30%), Gaps = 3/278 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L EV G V L+ SSV+ N + VGR+ + L + + +
Sbjct: 47 LPGGADLGDRPYEVTAEF-GDVLSLAPQSSVKVNDVAVGRVTRIALAPDG-WRARVTMRV 104
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
L ++ A + L G YI+L+ + + R + P F
Sbjct: 105 NGKIKLPANSYARLEQSSLLGEKYIQLAPPPEGTARGSLASGGRIPHSRTNRNPEVEEVF 164
Query: 148 IS-NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + ++ ++ + + + + + T++ N + +
Sbjct: 165 GALSLLLNGGGVNQLKTITTELNKALAGQEPQIRSMLNRVDTLVTNLDENKGDITRALDG 224
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + T + + + ++ +L ++ + D + + D
Sbjct: 225 VNRLAATLATRKQDVGTVLTGLSPGLKVLEKQRGSLLTMLRSLDTLSTVAVDTINRSKAD 284
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + + + D ++ T F + +
Sbjct: 285 MIADLKALAPTLKALADSGQDLPDSLQVLLTYPFTDEV 322
>gi|302525036|ref|ZP_07277378.1| MCE family protein [Streptomyces sp. AA4]
gi|302433931|gb|EFL05747.1| MCE family protein [Streptomyces sp. AA4]
Length = 341
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/264 (12%), Positives = 79/264 (29%), Gaps = 8/264 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
V +V G+ + S VR G+ VG + + + + P TP
Sbjct: 36 FSGSGRYRVTAYFSRAV-GVYSGSDVRVLGVKVGEVTAVLPQG---SQVRVDLSVDPHTP 91
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ TTA + + Y++L L + + A R TP ++ S+ +
Sbjct: 92 VAADTTALVIAPSVVADRYVQLGKLARGGPRLADGAVIGTDRT---GTPVELDQLYSSLD 148
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH-TTQVTPHSS 211
SK + + + + ++ + + + + + + + + +
Sbjct: 149 TLSKALGPNGANANGALSDLLRTGAANLDGNGKAFNTSVRDFARLARTLAGNSSDLFGTV 208
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
D F T+ + + + N S+ + + +R+
Sbjct: 209 DELQKFTTMLATNDRQVADVNQQLAKVSATLAANRGELSDALRSLGSALASVQGFIRDNR 268
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSK 295
+ K+ + S
Sbjct: 269 AAIKSNVDKLAKTTQTLVDQRASL 292
>gi|254443812|ref|ZP_05057288.1| mce related protein [Verrucomicrobiae bacterium DG1235]
gi|198258120|gb|EDY82428.1| mce related protein [Verrucomicrobiae bacterium DG1235]
Length = 546
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 36/413 (8%), Positives = 86/413 (20%), Gaps = 31/413 (7%)
Query: 44 RIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRT 103
++ + + G VG++ + E + T T
Sbjct: 159 VFSEDSGSVNLGDPILYRGRRVGQVDAAEFELENDR-----FRYDIFVKAPYDSLVTAPT 213
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR 163
+ + A A
Sbjct: 214 RFWKASAIQLQADANGFAIN----ADSLGSVLAGGIAFDLPGGARPGAVVGDGARFQLFG 269
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
I + + + L + + V S
Sbjct: 270 SKGDIDQFPHQYYAEYLLFFNDSVRGLKVGAPVEYRGIEVGHVEDVSFSYFKGREFFGAD 329
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ +++ + E+ V +R Q + +
Sbjct: 330 EVPVPALVRIYPGHFQLEDTEDGLARMRGLVTQH-----ASKGLRAALQRGNLLTGNLFV 384
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE-----ITDQRQKIISTINTIENI 338
+ F + ++ R T R + + +
Sbjct: 385 SMDFFPESEAYVFGAGVDWGYEVFPTHSVGLEQIERRILGILDTVDRLPLEDLTSEVREA 444
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
++ L+ ++ I + E +L + +R + E +
Sbjct: 445 IAHARTMFDNSKGLIENLDTIFSSDETQALPEGLERTLAAVEAAMEGV------------ 492
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++ RKL ++ ER P I++ + S K K
Sbjct: 493 APDSGVYRELETSFRKLNAALSDLQRLAQKLERRPNAILFSQPAESDPEPKAK 545
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 29/279 (10%), Positives = 78/279 (27%), Gaps = 10/279 (3%)
Query: 29 SRSNQYDGPMA-EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+Q+ E ++ SV GL + V + GI VG + +
Sbjct: 272 GDIDQFPHQYYAEYLLFFNDSVRGLKVGAPVEYRGIEVGHVEDVSFSYFKGR------EF 325
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
+ I + + + + RA +
Sbjct: 326 FGADEVPVPALVRIY---PGHFQLEDTEDGLARMRGLVTQHASKGLRAALQRGNLLTGNL 382
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + + + + + + IE + + + + T++V
Sbjct: 383 FVSMDFFPESEAYVFGAGVDWGYEVFPTHSVGLEQIERRILGILDTVDRLPLEDLTSEVR 442
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ ++ F+ LI +LD + + + Q + + LE + ++ ++
Sbjct: 443 EAIAHARTMFDNSKGLIENLDTIFSSDETQALPEGLERTLAAVEAAMEGVAPDSGVYREL 502
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + L + + S E+ +
Sbjct: 503 ETSFRKLNAALSDLQRLAQKLERRPNAILFSQPAESDPE 541
>gi|307545043|ref|YP_003897522.1| paraquat-inducible protein B [Halomonas elongata DSM 2581]
gi|307217067|emb|CBV42337.1| paraquat-inducible protein B [Halomonas elongata DSM 2581]
Length = 558
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/390 (7%), Positives = 105/390 (26%), Gaps = 31/390 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LS + F G PVGR+ D + H + + +T + +
Sbjct: 178 LSVGDPITFQGFPVGRVEKADFDVDTQQMHHRIFIESPYNQLITHNTRFWSTSGIDFSLN 237
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
++ + + + + + + +
Sbjct: 238 SQGINLQVESVEALLGGGVTFGVPEDLPPGQPVSPDTTFTLHPDEQSAREGTFDEYLEYV 297
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + ++ + + + +N D++
Sbjct: 298 LLVENTVRGLSKGAPVEFRGVR----------------LGTVASVPWNFTAPQPDDRDRL 341
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ ++ Q L ++ +++ + D++ + + +D D +
Sbjct: 342 AIPVLIRIEPQRLGVDKLDLDDWRERFDRLFGLGLRASLKSGSLLTGALFVDLTFDDQRA 401
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIRE--ITDQRQKIISTINTIENITSNLNDSSQK 348
ET A +++ + S + ++ + +E+ + ++
Sbjct: 402 GEHKAETFAGRTVFPTTSTGLAQIQSQVTALLDKLNALEVAPILTGLEDNLTTSKAMLEE 461
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+L + + ++ L + + T E ++ ++
Sbjct: 462 VRKLTASMQSLLDDPGTRELPGSLNATLKELQGTLEGLSA------------DSPAYREL 509
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ + +++ + +P+ +++
Sbjct: 510 TDTLDQVERLMRDLQPAARKISEDPRALLF 539
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/63 (19%), Positives = 21/63 (33%), Gaps = 7/63 (11%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-------FLDQEYPNHSLAKALI 87
E ++ + +V GLS + V F G+ +G + + D I
Sbjct: 290 FDEYLEYVLLVENTVRGLSKGAPVEFRGVRLGTVASVPWNFTAPQPDDRDRLAIPVLIRI 349
Query: 88 RPD 90
P
Sbjct: 350 EPQ 352
Score = 40.3 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS-VRFNGIPVGRIVGLFL 73
+ + + + + GP+ + + S DG+ S+ ++ + +G++ + L
Sbjct: 29 IVPIVALLIGAWLVYDNYASRGPLITLTM---DSADGIEAGSTLIKTRNVEIGQVESVSL 85
Query: 74 DQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + A+ + + L ++ +
Sbjct: 86 SDDQSRVIIKARMKSQAEPMLVEDSSFWV 114
>gi|303258322|ref|ZP_07344325.1| putative ABC-type transport system, periplasmic component
[Burkholderiales bacterium 1_1_47]
gi|302858768|gb|EFL81856.1| putative ABC-type transport system, periplasmic component
[Burkholderiales bacterium 1_1_47]
Length = 323
Score = 67.7 bits (162), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/314 (10%), Positives = 83/314 (26%), Gaps = 20/314 (6%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+V ++ + + + Y P V SV+GLS + V+F GI +G++ + L
Sbjct: 3 IVIVIAILIGLLCTV-FTPNYFRPKTIVETYFTESVNGLSPGAPVKFKGIDIGKVTEISL 61
Query: 74 D----QEY----------PNHSLAKALIRPDT---PLYPSTTATIRTQGLAGITYIELST 116
+ I + L +R Q +
Sbjct: 62 SSKVYPDDHISLFSPDASVAVVRMIVYIDENQLKEQLPDLIQKGLRFQTELAGVTGTIYL 121
Query: 117 LRKEKKTIFQIATERNQR--AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
++ P+ I+ EN ++ KI +
Sbjct: 122 AANFLNPTLYPPEIKDVPWKPKYIYVPATISLTNEILENIQHFLATLQNIKTKIDDVTPD 181
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ T + ++ DK+ + +S ++ + D+ + +
Sbjct: 182 AVKTQSTKELLTTLNNTVSMLDPDKLHTLLSNAENYVNSSHSILSKVDVARVNSLLSELT 241
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + S + + + + + +E+ + + + +S
Sbjct: 242 KTTEKLNTTLHETKGSGLVTQLNKTISGADQAIVDNRYNIRELILNLKDISDNLKILSES 301
Query: 295 KETSAFLENIADST 308
Sbjct: 302 LAQDPNFLAPRPHH 315
>gi|260597349|ref|YP_003209920.1| paraquat-inducible protein B [Cronobacter turicensis z3032]
gi|260216526|emb|CBA29722.1| Paraquat-inducible protein B [Cronobacter turicensis z3032]
Length = 558
Score = 67.3 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/413 (10%), Positives = 106/413 (25%), Gaps = 30/413 (7%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTT 98
+ + + S G L+ V F G VG + D + + S D + +
Sbjct: 170 IRVILDSSKAGQLNPGDPVLFRGYRVGSVETSTFDPQKRSISYQLFINAPNDRLVTSNVR 229
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ ++ + T+F P G AE T+ +
Sbjct: 230 FWKDSGIAVDLSSSGMRVEMGSLSTLFSGGV-------SFDVPDGWELGQPVAEKTAFTL 282
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
D R IQ+ + + A ++ +
Sbjct: 283 YDDQRSIQESLYTEHIDYLMFFKDTIRGLQPGAPVEFRGIRL-------GTVAQVPFFVP 335
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ +T+ ++ + ++ + + + ++ ++
Sbjct: 336 GLHQAVTTDYRIPVLVRIEPERLANQIGEDPNIASHMHDLLKKGLRATLKTGNLVTGQLF 395
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
+D +K + S + I N
Sbjct: 396 VDLDFYPKAPPVTEMAKFNGYPVIPTVSSGLAQIQQRLMDTLDKINNLPLNPMIEQATNT 455
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
S + ++ + +N +++ + L D Q+ + + +
Sbjct: 456 LSESQRTMRRLQTTLDNLNQLTSSQSAQDLPADMQKTLRELNRSMQGFQP---------- 505
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 506 --GSAAYNKMVADMQRLDQVLRELQPVLRTLNEKSNALVF--ESKEKKDPQPK 554
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/270 (10%), Positives = 75/270 (27%), Gaps = 25/270 (9%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTPLY 94
+ ++ ++ GL + V F GI +G + + F I +
Sbjct: 295 TEHIDYLMFFKDTIRGLQPGAPVEFRGIRLGTVAQVPFFVPGLHQAVTTDYRIPVLVRIE 354
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
P A + +++ + + T+ Q
Sbjct: 355 PERLANQIGEDPNIASHMHDLLKKGLRATLKTGNLVTGQ--------------------- 393
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ K E I T+S+ LA + + P + +
Sbjct: 394 ---LFVDLDFYPKAPPVTEMAKFNGYPVIPTVSSGLAQIQQRLMDTLDKINNLPLNPMIE 450
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
NT+++ ++ ++ +D ++ Q + K+ ++ ++ + + +
Sbjct: 451 QATNTLSESQRTMRRLQTTLDNLNQLTSSQSAQDLPADMQKTLRELNRSMQGFQPGSAAY 510
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
++ + L T N
Sbjct: 511 NKMVADMQRLDQVLRELQPVLRTLNEKSNA 540
>gi|21233626|ref|NP_639543.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66770591|ref|YP_245353.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|188993824|ref|YP_001905834.1| hypothetical protein xccb100_4429 [Xanthomonas campestris pv.
campestris str. B100]
gi|21115495|gb|AAM43425.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66575923|gb|AAY51333.1| toluene tolerance protein [Xanthomonas campestris pv. campestris
str. 8004]
gi|167735584|emb|CAP53802.1| putative exported protein [Xanthomonas campestris pv. campestris]
Length = 180
Score = 67.3 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +I R + L + V+ G+ +G++ + LD + +
Sbjct: 36 GFGSSQYTLIARFSQ-IGQLRPQAPVKIGGVTIGKVSDISLDPTKFDSV-VTLSLDTKYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|326331669|ref|ZP_08197957.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950468|gb|EGD42520.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 324
Score = 67.3 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 28/101 (27%), Gaps = 7/101 (6%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VG+ V + + ++ V + GL V G VG
Sbjct: 10 LKVGIVAVVLAALTVVFVFRAGALGF----GERVCVAHFEHTAGLRVGEDVTVAGARVGE 65
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
+ + L + + + L T A I L G
Sbjct: 66 VRSISL---GARDVIVEFTVEDHIRLGARTGAEIEVATLLG 103
>gi|87125435|ref|ZP_01081280.1| hypothetical protein RS9917_01641 [Synechococcus sp. RS9917]
gi|86166735|gb|EAQ67997.1| hypothetical protein RS9917_01641 [Synechococcus sp. RS9917]
Length = 294
Score = 67.3 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
LF+ S ++ L+R ++ V + + + GL + VR +G PVG++ GL
Sbjct: 19 LFLGSGTLLLVAVLFGLAREQRWGSRFVNVYL-LASDISGLHSGEEVRISGFPVGQVGGL 77
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L + + + P+++A + +GL G +
Sbjct: 78 ELKPDARVRVQLRIEQSKARLIGPNSSARLAQEGLVGDRF 117
>gi|294816018|ref|ZP_06774661.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|326444360|ref|ZP_08219094.1| putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
gi|294328617|gb|EFG10260.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 397
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/260 (12%), Positives = 69/260 (26%), Gaps = 4/260 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L EV V L S+V+ N + VGR+ + LD+E + I
Sbjct: 36 LPGGADLGSHPYEVTAEF-ADVLSLVPQSAVKVNDVAVGRVTRIRLDRED-WTARVTLRI 93
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
L A + L G YI+L+ E + +
Sbjct: 94 NGSVRLPADAWAQLEQSSLLGEKYIQLTPPPATGSPGRPG--EPGEPLTGAGPGAAPVTA 151
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
A + + E E ++ + N + +++ + +
Sbjct: 152 SGGAGRLRDGATIPVSRTNRNPEVEEVFGALSLLLNGGGIDQIKNIATELNQAIGGREPR 211
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
S + + + + ++ L + + + + +
Sbjct: 212 VRSVLRRIDTLVTSLDRNKKNITAALDGVNRLAANLAARKTEIGRVLTGVSPGLKVLDEQ 271
Query: 268 RETTQTFQEVGQKIDHLLSD 287
R + T + + D
Sbjct: 272 RGSLITMLRALDTLSDVAVD 291
>gi|41408212|ref|NP_961048.1| hypothetical protein MAP2114c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396567|gb|AAS04431.1| hypothetical protein MAP_2114c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 392
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/278 (11%), Positives = 85/278 (30%), Gaps = 8/278 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+ + + ++ + + G+ ++VR +G+ VGR+ L L
Sbjct: 19 VLGTVILACVTVVAFQYNKLPFIKNTDDYAAYFSEAGGIKPGNAVRVSGMGVGRVSDLRL 78
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ +R L T A I+T+ + G +EL+ + +
Sbjct: 79 EG---TKVRIGFTVRKGVVLGDRTEAAIKTETILGAKMLELTPRGDGRLSGVIPLERTTS 135
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
+ + IS + + S + + + ++ ++ ++
Sbjct: 136 PYDLPDALGDLTTTISGLDT-----TQLSAALTTLADTLKATPENLKPALQGVARFSDTL 190
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF 253
S ++ H S + + + + A L + + + + +
Sbjct: 191 NSRDAQLRSLLGNANHVSAVLGRRSQQIAGLVANSHALLAALLDERDSLDALMNHLTAVS 250
Query: 254 VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ S V + ++ V + +D+ +
Sbjct: 251 HQISGLVNDNRTQLKPALDKLNGVLEILDNRKEELQKT 288
>gi|317508283|ref|ZP_07965963.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253458|gb|EFV12848.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 375
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 40/355 (11%), Positives = 99/355 (27%), Gaps = 13/355 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S + L V +L F WL + P + GL ++V
Sbjct: 1 MRSFRNAFIMVLAVAVVLSLGFGG-NWLYHKKLF--PTRTICATF-RDGFGLYPGNNVSL 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++V + + + D L A + +EL+ K+
Sbjct: 57 LGVDVGKVVSVEPQDD---VVKVLFEVPKDLDLPADVKAITNGASVVTDMRVELTKGYKD 113
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
F + T TP + + N + ++ ++ Q + +
Sbjct: 114 GPK-FTGEHCLEAKNGDTKTPVPPSETLETLTNFADGLTGNADPNQPVGQIATLLRRVQE 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + + P D + + + + KM +
Sbjct: 173 SISGKGPEINEVFRKSMRLFNTDVFPEPLLVDLIENTDLLLRELNTTSKMDLLTVQDNIQ 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-----DHLLSDFSSKMKSK 295
+++ + F K+ + + + + + ++ L S+ S
Sbjct: 233 GLVDFLTDFQITFSKAIYADAQLITSLSYSVIRLEPMLGRLLQLLMPALHRTLSALNDSI 292
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + ++ + + + + + +N S + A
Sbjct: 293 DILEQIPTLLNNWQAVLDPRIDPGAQSFGPVTLDLAVTAAKGTCEWVNTFSPRIA 347
>gi|296165205|ref|ZP_06847752.1| virulence factor Mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899394|gb|EFG78853.1| virulence factor Mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 363
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 42/131 (32%), Gaps = 7/131 (5%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ V++++ + +W + V + S GL + V G+PVG+I +
Sbjct: 4 IAVLAVIATVVGAGWWYLGAG---EDTITVTAQF-DSAAGLYEGNEVAVLGMPVGKITRI 59
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + + + + A + + IEL+ T+ T
Sbjct: 60 TP---RGGYVEVEFTVDRHVKIPAAAQAVTVSTSILTDRQIELTPPYHGGPTLEDHDTIG 116
Query: 132 NQRAMITATPS 142
R S
Sbjct: 117 LPRTKTPVEFS 127
>gi|182434827|ref|YP_001822546.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178463343|dbj|BAG17863.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 416
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L EV G V L+ SSV+ N + VGR+ + L + + +
Sbjct: 47 LPGGADLGDRPYEVTAEF-GDVLSLAPQSSVKVNDVAVGRVTRIALAPDG-WRARVTMRV 104
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE 113
L ++ A + L G YI+
Sbjct: 105 NGKIKLPANSYARLEQSSLLGEKYIQ 130
>gi|169628787|ref|YP_001702436.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169240754|emb|CAM61782.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 338
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/290 (10%), Positives = 81/290 (27%), Gaps = 15/290 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T +G+ V+++ + + + + + L + V G+ V
Sbjct: 9 NKTWLGVAAVAVVAALIGGLLLVKQLGI---GYRQFTAEFLQAAA-LRPGNIVTVAGVQV 64
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + G+ L + A +R + + + A I+ L G Y++L
Sbjct: 65 GSVTGVRLAGD---RVEATFRVRDNMAVGTDSRAAIKITTLFGSRYVDLRPAGA------ 115
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
T +R + T + + A++T + I + + L +
Sbjct: 116 --GTPAGRRISLQHTEVPYDLQAALADSTRTFEQVDADRIASSLNVLGTQLDGLPGVVPQ 173
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ + I + S+++ + + +
Sbjct: 174 AMENVRALSAVIAQRREQLGTLLTSTENVTSMLRRQQSDIGTFIRQGQELVGEFVARSAA 233
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + V +++ L+D + +++
Sbjct: 234 FHAMMRSLQSIVASLRTIVVGDHRALDGVIHTLEELSGKLADQDALLRNL 283
>gi|126436758|ref|YP_001072449.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236558|gb|ABN99958.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 407
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/302 (11%), Positives = 86/302 (28%), Gaps = 15/302 (4%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+S VG ++ + + + + GL ++V
Sbjct: 1 MKSFAERNSLIVGAVGCALTAGIVTAATLYDKL-PFITRNHTYTAHLAE-AGGLRAGAAV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G VG++ + LD L + + L T A ++T+ L G E+
Sbjct: 59 QVFGTRVGQVSSIELDG---RQVLITFDVSKEITLGDRTEAAVKTKSLLGTKIFEV---T 112
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA-----ENTSKKISDSSRHIQKIIENIE 173
++ P + + + S +S ++ + ++
Sbjct: 113 PRGDGRLAGTIPLDRTTPAYQLPDALGDLTTTISGLDTDQVSDSLSVLAQTFAETPPELK 172
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ +TI A + + + T V S + + T+ + +
Sbjct: 173 VAVQGVARLSQTIDARDAQLRNLLANVNKVTAVLSERSTQIVSLISDTNALMVELQNQSN 232
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ I + S + Q+ + + +++ + ++
Sbjct: 233 ALQTVASNISAMSRQLSGLVADNRAQLKPALDKLNGVLTIVDNRKERVQEAIKGLNAYAM 292
Query: 294 SK 295
S
Sbjct: 293 SL 294
>gi|254821568|ref|ZP_05226569.1| mce related protein [Mycobacterium intracellulare ATCC 13950]
Length = 416
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 46/371 (12%), Positives = 99/371 (26%), Gaps = 10/371 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
V++++ + R N D +V IR+P S GL + V GI VGRI L
Sbjct: 27 ALVLTLVVGLAYLAIGALRINPLDS-TFQVTIRLPES-GGLLANQDVSVRGIRVGRIQSL 84
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
A I +T + ++ + AG YI+ + +
Sbjct: 85 RPTPTG---VEVIANINANTKIPAASPVRVSGLSPAGEQYIDFEPASNSGPFLSNGSVIG 141
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
QR S + + + + T I + T
Sbjct: 142 PQRTTTPIPLSQVLADADGMLAQADPKKLEIVKRELSLSKEGPQKLTDIIDGSTFLLSTM 201
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT-----SLDKMIKAIDLQKVNQILENI 246
+ + M T ++ S + + + V+Q +
Sbjct: 202 DPVLPQTVSMLKTSRVVLTTLSDKNAGLAVAARNVGDLMTGVNKMDRGYRKFVDQTPHAM 261
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
N F +SD ++ + ++ T + ++ + ++ + E+
Sbjct: 262 SSVDNLFDDNSDTMVGLLANLVTTARIIYVRVPALNAVFPNYRGSTLEALMTTMHEHGLW 321
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+T+++ + + +D +
Sbjct: 322 ATADIYPRYTCDYGTPRRPSSSADYPEPFLYTYCRDDDPQVLIRGAKNAPRPGGDDTAGP 381
Query: 367 SLFKDAQRAMH 377
D +
Sbjct: 382 PAGADLGQTAD 392
>gi|260186942|ref|ZP_05764416.1| MCE-family protein mce3F [Mycobacterium tuberculosis CPHL_A]
gi|289447588|ref|ZP_06437332.1| MCE-family protein mce3F [Mycobacterium tuberculosis CPHL_A]
gi|289420546|gb|EFD17747.1| MCE-family protein mce3F [Mycobacterium tuberculosis CPHL_A]
Length = 437
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 6/130 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSN--QYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + +F V + + R + V + + GL +V +
Sbjct: 6 RRVIVQLAVFTVIAVGVLAITFLHFVRLPAMLFGVGRYTVTMELVE-AGGLYRTGNVTYR 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A ++ + A + + G TY+EL
Sbjct: 65 GFEVGRVAAVRL---TDTGVQAVLALKSGIDIPSDLKAEVHSHTAIGETYVELLPRNAAS 121
Query: 122 KTIFQIATER 131
+
Sbjct: 122 PPLKNGDVIA 131
>gi|313673542|ref|YP_004051653.1| mammalian cell entry related domain protein [Calditerrivibrio
nitroreducens DSM 19672]
gi|312940298|gb|ADR19490.1| Mammalian cell entry related domain protein [Calditerrivibrio
nitroreducens DSM 19672]
Length = 331
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 96/294 (32%), Gaps = 11/294 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
K VGLF++ + ++ ++ + + P ++ I + + D L V F+G
Sbjct: 7 KGIEFKVGLFIILSILTVLVALGLIAFNKKVLTPKVKIKI-LSDTGDDLINGMPVIFSGF 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+GR+ L L+ + + K + + + ++ G T I S
Sbjct: 66 QIGRVQDLNLEDDGKVIMVVKIPKDYVKWIKVDSECKLESKNFLGATSIVFSGG------ 119
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ ++ G++ I A+ +++ I + + P +
Sbjct: 120 --KGRVIQDGDKFHLKRSRGLDELIEKAKPVLDDAKQIVANVRDITDTLNDPGGDLAKLM 177
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL--QKVNQ 241
+ + + + + + + I L +L+ + + KV+
Sbjct: 178 RGLGNLGDDLTYKRGSLGKILRTEELNDKISKITDDIIVLQKNLNDISLKVSKILDKVDD 237
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + + DV + + + + + +H+ + + +
Sbjct: 238 RVAATDETLKEVNNLVKKSNELITDVNKRVKEIEPILKNTEHISKNLAETSDNL 291
>gi|90023149|ref|YP_528976.1| fibronectin, type III [Saccharophagus degradans 2-40]
gi|89952749|gb|ABD82764.1| Mammalian cell entry related [Saccharophagus degradans 2-40]
Length = 537
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 35/393 (8%), Positives = 112/393 (28%), Gaps = 26/393 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S + + I VG + L ++ I + R++ +
Sbjct: 168 IDIGSPLYYRQIRVGEVTSYKLAEDNN-----HVDINVFIRAPYNKLVQTRSRFWNVSGF 222
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ A+ + + +N + + + +
Sbjct: 223 GLSMG--------------ADGIKAHMASLASLISGGIAFDNAAGFENATLADEGRRFFL 268
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ L + + V + D +++K +
Sbjct: 269 YPDRESVQEGRFNIKYYYLLRFSDSVRGLTVGAPVEFRGIHIGEVVDVSLDTADNIEKSL 328
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL-SDFSS 290
+ ++ N + + ++ + T + + ID + +D +
Sbjct: 329 LVYIAMEPQRLEPNTNPTREEVDARMESLVAQGLRAKMKTASMLTGSRYIDLVFENDAND 388
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + I + + + I + I E I S+L+ S
Sbjct: 389 GHVAFVRAENYSEIPTANGTIDDLTREVAGIVGKINNI-----PFEQIGSDLSASMSSLK 443
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
++ + + ++ + + + + +++ + S+ + + S+ ++
Sbjct: 444 TILGDLERNQTADKMDAAVANLDKTLENAKQALGQLDSVLQSVDHAIAPDSELKY-ELTE 502
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+++ + E + +N RNP ++ G +K
Sbjct: 503 MLKAVSEAAGSVELFVNELNRNPNALISGVDKD 535
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 29/84 (34%), Gaps = 8/84 (9%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP--NHSLAKALIRPDT---- 91
++R SV GL+ + V F GI +G +V + LD L + P
Sbjct: 283 KYYYLLRFSDSVRGLTVGAPVEFRGIHIGEVVDVSLDTADNIEKSLLVYIAMEPQRLEPN 342
Query: 92 --PLYPSTTATIRTQGLAGITYIE 113
P A + + G+
Sbjct: 343 TNPTREEVDARMESLVAQGLRAKM 366
>gi|326331668|ref|ZP_08197956.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950467|gb|EGD42519.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 353
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/279 (10%), Positives = 72/279 (25%), Gaps = 6/279 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
V + + GL + V G+ VG + + + D +
Sbjct: 36 FAGTYSVTVTFADTA-GLFVGNDVGVLGVKVGEVKRITPAGAG---VEVDLELDQDVTVP 91
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT--ATPSGINYFISNAE 152
A I ++ +A Y+EL+ + ++R ++
Sbjct: 92 ADAQALIVSRSVANDRYVELTPRYAGGPVLADGDLITSERTRTPADFDAILNALDRFSSG 151
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
R +Q + A + ++ L H D + T +
Sbjct: 152 LAGGDGKSVDRFLQAGSATLGSNGQRAGAALADLAAALNEVNGHTDSAVAALHETDELTS 211
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + + +L + ++ + ++ + + D++
Sbjct: 212 AMVAHDALIELFIENVTATSELLAEQRTEFTATLRTTREAIDALARFTQANDKDLQAALT 271
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
V I D ++ + A + +
Sbjct: 272 QVNAVLDLILAHTDDIEEFVEVLPLALQNVEQARAPGGV 310
>gi|15609108|ref|NP_216487.1| MCE-family protein MCE3F [Mycobacterium tuberculosis H37Rv]
gi|148661780|ref|YP_001283303.1| MCE-family protein Mce3F [Mycobacterium tuberculosis H37Ra]
gi|167970507|ref|ZP_02552784.1| MCE-family protein mce3F [Mycobacterium tuberculosis H37Ra]
gi|306776203|ref|ZP_07414540.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu001]
gi|306972312|ref|ZP_07484973.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu010]
gi|307080023|ref|ZP_07489193.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu011]
gi|307084597|ref|ZP_07493710.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu012]
gi|2950441|emb|CAA17844.1| MCE-FAMILY PROTEIN MCE3F [Mycobacterium tuberculosis H37Rv]
gi|148505932|gb|ABQ73741.1| MCE-family protein Mce3F [Mycobacterium tuberculosis H37Ra]
gi|308215315|gb|EFO74714.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu001]
gi|308358190|gb|EFP47041.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu010]
gi|308362122|gb|EFP50973.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu011]
gi|308365776|gb|EFP54627.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu012]
Length = 437
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 6/130 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSN--QYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + +F V + + R + V + + GL +V +
Sbjct: 6 RRVIVQLAVFTVIAVGVLAITFLHFVRLPAMLFGVGRYTVTMELVE-AGGLYRTGNVTYR 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A ++ + A + + G TY+EL
Sbjct: 65 GFEVGRVAAVRL---TDTGVQAVLALKSGIDIPSDLKAEVHSHTAIGETYVELLPRNAAS 121
Query: 122 KTIFQIATER 131
+
Sbjct: 122 PPLKNGDVIA 131
>gi|15841446|ref|NP_336483.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|215404235|ref|ZP_03416416.1| MCE-family protein mce3F [Mycobacterium tuberculosis 02_1987]
gi|215411653|ref|ZP_03420449.1| MCE-family protein mce3F [Mycobacterium tuberculosis 94_M4241A]
gi|254232141|ref|ZP_04925468.1| MCE-family protein mce3F [Mycobacterium tuberculosis C]
gi|254364788|ref|ZP_04980834.1| MCE-family protein mce3F [Mycobacterium tuberculosis str. Haarlem]
gi|289746090|ref|ZP_06505468.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|294996893|ref|ZP_06802584.1| MCE-family protein mce3F [Mycobacterium tuberculosis 210]
gi|298525465|ref|ZP_07012874.1| MCE-family protein Mce3F [Mycobacterium tuberculosis 94_M4241A]
gi|306779984|ref|ZP_07418321.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu002]
gi|306784734|ref|ZP_07423056.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu003]
gi|306789091|ref|ZP_07427413.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu004]
gi|306793426|ref|ZP_07431728.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu005]
gi|306797809|ref|ZP_07436111.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu006]
gi|306803690|ref|ZP_07440358.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu008]
gi|13881685|gb|AAK46297.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|124601200|gb|EAY60210.1| MCE-family protein mce3F [Mycobacterium tuberculosis C]
gi|134150302|gb|EBA42347.1| MCE-family protein mce3F [Mycobacterium tuberculosis str. Haarlem]
gi|289686618|gb|EFD54106.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|298495259|gb|EFI30553.1| MCE-family protein Mce3F [Mycobacterium tuberculosis 94_M4241A]
gi|308327088|gb|EFP15939.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu002]
gi|308330467|gb|EFP19318.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu003]
gi|308334301|gb|EFP23152.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu004]
gi|308338103|gb|EFP26954.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu005]
gi|308341795|gb|EFP30646.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu006]
gi|308349585|gb|EFP38436.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu008]
gi|323719458|gb|EGB28585.1| MCE-family protein mce3F [Mycobacterium tuberculosis CDC1551A]
gi|326903578|gb|EGE50511.1| MCE-family protein mce3F [Mycobacterium tuberculosis W-148]
Length = 437
Score = 67.3 bits (161), Expect = 5e-09, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 6/130 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSN--QYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + +F V + + R + V + + GL +V +
Sbjct: 6 RRVIVQLAVFTVIAVGVLAITFLHFVRLPAMLFGVGRYTVTMELVE-AGGLYRTGNVTYR 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A ++ + A + + G TY+EL
Sbjct: 65 GFEVGRVAAVRL---TDTGVQAVLALKSGIDIPSDLKAEVHSHTAIGETYVELLPRNAAS 121
Query: 122 KTIFQIATER 131
+
Sbjct: 122 PPLKNGDVIA 131
>gi|317508280|ref|ZP_07965960.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253455|gb|EFV12845.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 251
Score = 67.3 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 14/147 (9%)
Query: 9 SVGL----FVVSILFFSF-FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
VGL F+ L SI + ++ G V L +S VR +G+
Sbjct: 2 KVGLDLLKFIAFGLVVFVCGSIIFRVLTSPIKGETDRYTAVF-NDVSSLRENSDVRMSGV 60
Query: 64 PVGRIVGLFL-----DQEYP--NHSLAKALIRPDTPLYPSTTATIRTQGLAGITY-IELS 115
VG++ + D + H+ + +Y +T +R + L G+ Y +
Sbjct: 61 LVGKVQQVEPVVDGADPDNRDAAHAHVVFTLEKKYSIYRNTRLAVRYENLLGVRYLEIIP 120
Query: 116 TLRKEKKTIFQIATERNQRAMITATPS 142
+ + + + R + + + S
Sbjct: 121 PEQPGSQRLSPGSVIRLDQTVSSFDVS 147
>gi|254822749|ref|ZP_05227750.1| hypothetical protein MintA_22659 [Mycobacterium intracellulare ATCC
13950]
Length = 336
Score = 67.3 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 33/97 (34%), Gaps = 7/97 (7%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+ + Y S P ++ G++ ++V +G VG++ + L
Sbjct: 2 VLVVCVVLIAFGY----SGLPFWPQGKIYDAYFSDAGGINPGNAVYVSGFKVGKVTSVGL 57
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + + + + A IRT + G
Sbjct: 58 AGDS---AKISFSVDRHVAVGDQSLAAIRTDTILGER 91
>gi|215430881|ref|ZP_03428800.1| MCE-family protein mce3F [Mycobacterium tuberculosis EAS054]
gi|219557925|ref|ZP_03537001.1| MCE-family protein mce3F [Mycobacterium tuberculosis T17]
gi|260201064|ref|ZP_05768555.1| MCE-family protein mce3F [Mycobacterium tuberculosis T46]
gi|289443455|ref|ZP_06433199.1| MCE-family protein mce3F [Mycobacterium tuberculosis T46]
gi|289570061|ref|ZP_06450288.1| MCE-family protein mce3F [Mycobacterium tuberculosis T17]
gi|289754068|ref|ZP_06513446.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289416374|gb|EFD13614.1| MCE-family protein mce3F [Mycobacterium tuberculosis T46]
gi|289543815|gb|EFD47463.1| MCE-family protein mce3F [Mycobacterium tuberculosis T17]
gi|289694655|gb|EFD62084.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
Length = 437
Score = 67.3 bits (161), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 6/130 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSN--QYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + +F V + + R + V + + GL +V +
Sbjct: 6 RRVIVQLAVFTVIAVGVLAITFLHFVRLPAMLFGVGRYTVTMELVE-AGGLYRTGNVTYR 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A ++ + A + + G TY+EL
Sbjct: 65 GFEVGRVAAVRL---TDTGVQAVLALKSGIDIPSDLKAEVHSHTAIGETYVELLPRNAAS 121
Query: 122 KTIFQIATER 131
+
Sbjct: 122 PPLKNGDVIA 131
>gi|312138212|ref|YP_004005548.1| mce family protein mce2c [Rhodococcus equi 103S]
gi|311887551|emb|CBH46863.1| putative Mce family protein Mce2C [Rhodococcus equi 103S]
Length = 352
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/316 (9%), Positives = 92/316 (29%), Gaps = 7/316 (2%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
Q+ GL+ +V G+ VG++ + LD + L +
Sbjct: 34 QFLSGGVRYSAAFSE-AGGLTVGDNVTVAGVDVGKVDKVELDGQ---QVLVTFTVSEGIV 89
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
L +T A I+T + G + ++ + + + + T + + S +E
Sbjct: 90 LGDATGADIKTNTVLGKKSLAVAPEGSGTLRVGETIPIERTNSPYSLTDALGDLGSSISE 149
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ ++ S + +++ L + + +S + + +++ +
Sbjct: 150 LDTDQLDKSLDAVSGALQDTPPELRAALDGVSRLSKSINERDESLLELLKRAEGVTKVLS 209
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
++ + + +N+++ N S V + T
Sbjct: 210 DRSDQINSLIVDGNELFGELERRRDAINELIVNTSAVSRQLS---GLVQENQAQMGPTLD 266
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + + + + ++ + + + + +
Sbjct: 267 NLNQAVAVLQRNKQNIADALDGLGPYIGALGETVASGPYFKAYVSNILPSMWWKTALDAG 326
Query: 333 NTIENITSNLNDSSQK 348
+ + +L D +
Sbjct: 327 LAPDQLPQDLQDLIPE 342
>gi|148823185|ref|YP_001287939.1| MCE-family protein mce3F [Mycobacterium tuberculosis F11]
gi|253798981|ref|YP_003031982.1| MCE-family protein mce3F [Mycobacterium tuberculosis KZN 1435]
gi|254550992|ref|ZP_05141439.1| MCE-family protein mce3F [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289554252|ref|ZP_06443462.1| MCE-family protein mce3F [Mycobacterium tuberculosis KZN 605]
gi|297634540|ref|ZP_06952320.1| MCE-family protein mce3F [Mycobacterium tuberculosis KZN 4207]
gi|297731528|ref|ZP_06960646.1| MCE-family protein mce3F [Mycobacterium tuberculosis KZN R506]
gi|313658861|ref|ZP_07815741.1| MCE-family protein mce3F [Mycobacterium tuberculosis KZN V2475]
gi|148721712|gb|ABR06337.1| MCE-family protein mce3F [Mycobacterium tuberculosis F11]
gi|253320484|gb|ACT25087.1| MCE-family protein mce3F [Mycobacterium tuberculosis KZN 1435]
gi|289438884|gb|EFD21377.1| MCE-family protein mce3F [Mycobacterium tuberculosis KZN 605]
gi|328458736|gb|AEB04159.1| MCE-family protein mce3F [Mycobacterium tuberculosis KZN 4207]
Length = 437
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 38/130 (29%), Gaps = 6/130 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSN--QYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + +F V + + R + V + + GL +V +
Sbjct: 6 RRVIVQLAVFTVIAVGVLAITFLHFVRLPAMLFGVGRYTVTMELVE-AGGLYRTGNVTYR 64
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VGR+ + L A ++ + A + + G TY+EL
Sbjct: 65 GFEVGRVAAVRL---TDTGVQAVLALKSGIDIPSDLKAEVHSHTAIGETYVELLPRNAAS 121
Query: 122 KTIFQIATER 131
+
Sbjct: 122 PPLKNGDVIA 131
>gi|315606266|ref|ZP_07881282.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
gi|315251957|gb|EFU31930.1| conserved hypothetical protein [Prevotella buccae ATCC 33574]
Length = 300
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/290 (12%), Positives = 91/290 (31%), Gaps = 6/290 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + L + + F+ + +L + + +++GL + V
Sbjct: 1 MKFFTKEVKIALVAIVGVVVFFYGVNFLKGLTIFSTATTYYMT--FDNLEGLGASTPVYA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + + D N + I D + +TA I + L G + +
Sbjct: 59 DGYKVGVVKSIEYDYSRKNSTRVAVGINQDMRIPKGSTAEIV-KDLMGNIQVNILLANNP 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + + + E K+ + ++ N +
Sbjct: 118 RERVEPGGVIPGGVNPGAL--GAVKGMVPEIEKMLPKLDSILASLNTLLANPAIAQSLGN 175
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T + ++ + +V + + L +L + + +VN
Sbjct: 176 IQTTTANLAVSTQQLNQLMGGLNREVPGMLRKANGVLDNTNRLTNNLAAVDVQETMSQVN 235
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ L N++ ++ + + ++D E + D L+ +F +
Sbjct: 236 RTLANMEAFTDKLNSNKGTLGLLMNDP-ELYDNLNATMRNADSLMINFKA 284
>gi|254447554|ref|ZP_05061020.1| ABC-type multidrug transport system substrate-binding protein,
putative [gamma proteobacterium HTCC5015]
gi|198262897|gb|EDY87176.1| ABC-type multidrug transport system substrate-binding protein,
putative [gamma proteobacterium HTCC5015]
Length = 331
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/290 (12%), Positives = 79/290 (27%), Gaps = 9/290 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
GLFVV L L Y + + S GL + V+ +G+ VG +
Sbjct: 11 VAGLFVVIALVAVTLVSIMLVVRTGYFSEKTPYSVVVK-SATGLHVGTRVQMSGLNVGWV 69
Query: 69 VGLFLDQEYPNHSLAKALI--RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ L P L + I + T + G +E+ +
Sbjct: 70 DDVDLIA--PGQVLVEFSILEEYARRVVEGTKIQMVRPYAVGEKLLEIQAADPANPPLPS 127
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
++ + + + D + + + E + + T
Sbjct: 128 GSSLPLLESFDLVDLMSGRTLGPFVASIEALVGDLNNTMLVLQEAGTFERVNALLDQSTP 187
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL----DKMIKAIDLQKVNQI 242
NN+S M T + + + ++ + ++
Sbjct: 188 VMENVNNMSREMAAMAGTFNEQQRLAKLLREMQASAQEMNQLLPVMRQNMPAIMEPMPEL 247
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
L N+ S + + + ++ T++ E + L+
Sbjct: 248 LNNLNAVSQELQQLTPVLAEVGPELPRTSRRAIEAIDEAVILMKALQKSF 297
>gi|324999489|ref|ZP_08120601.1| virulence factor Mce family protein [Pseudonocardia sp. P1]
Length = 438
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 49/401 (12%), Positives = 108/401 (26%), Gaps = 38/401 (9%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIPV 65
VG F+V L + + P + I S VD L VR G+ V
Sbjct: 17 AALVG-FLVLCLGTAVVFYINMGGRIPLVNPAPDYRISFTTSDVDNLVEAGDVRIAGVDV 75
Query: 66 GRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
G + + + + I PL+ T I + L G +Y+++
Sbjct: 76 GEVSSRKIAGDT---VRVEMTIADEFAPLHEGMTTRIGLKSLLGASYVDVVDGTG----- 127
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
S AE + S I + + ++
Sbjct: 128 --------------------TELESGAELPPDGVRPSVEVDDVIAGLDPATRDSLSSTVQ 167
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ A +D +M + + + + ++
Sbjct: 168 SLGAGTAGRQQDVDGIMTGLGDLGRNGHTALDALAAQSADITALTREAGALVDTLDTGQG 227
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
I + + + ++ T + + D S S
Sbjct: 228 QIATLARDAQRIVGATAGQRENLEGTVRRLPGALGTVRDATDDLSRLSGSL-----APVA 282
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
AD + +A+ ++ + + ++ + + + L ++ + + E
Sbjct: 283 ADLRTAAPDLNAALVQLPATTADLRGLLGPLDGVLDRAPATLDRIPALGENVSTL--VPE 340
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
L +D + I + + Q S++GL
Sbjct: 341 ARPLLQDLNPMVSYLAPYGRDTGSMIANFAASFQYRSENGL 381
>gi|254784636|ref|YP_003072064.1| paraquat-inducible protein B [Teredinibacter turnerae T7901]
gi|237686922|gb|ACR14186.1| paraquat-inducible protein B [Teredinibacter turnerae T7901]
Length = 536
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 37/410 (9%), Positives = 118/410 (28%), Gaps = 27/410 (6%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D P + +++ + L S + F I VG + G L H IR
Sbjct: 154 DEPGTQYVLQAEE-LGSLDIGSPIYFRQIRVGEVTGYKLSG-TMEHVDIHMFIRA----P 207
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
+ R++ + + + + + + +N
Sbjct: 208 YDSMVQTRSRFWNVSGFGV--------------SINADGMKARMESLASLISGGIAFDNA 253
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + + V
Sbjct: 254 AGFENVQVAPDGHRFYLYPDRESVLEGRFNIKYYYQLKFSGSVRGLTVGAPVEFRGIKVG 313
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + ++ + + ++ + + + + ++N + +T +
Sbjct: 314 EVVDVVLASAENVSDSLLVYIAMEPERLEPDDSPTREEVDERMETMVNQGLRAQMSTASL 373
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ ID + D ++ + S+ + I+ I
Sbjct: 374 ITGSRFIDLVFVD-----DAEPVEFVRSENYSEIPTVPDSMEQLSSQATDILAKINKIP- 427
Query: 335 IENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
+ I + L S + L++ ++ + + ++ + Q+ M + + +++ + + S+
Sbjct: 428 FDKIGTELAGSLESLNNLLTTLDKQNTAGKLDTTMDNLQQTMASANEALQQMTQVMDSVD 487
Query: 395 NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ S+ + + + + + ++ R+P ++ G+EK
Sbjct: 488 QMVAPDSEFKY-EFTEMAKSVSDAARSLQLFMDELNRHPTSLISGKEKDE 536
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 49/434 (11%), Positives = 115/434 (26%), Gaps = 27/434 (6%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL+ + AEV I + + + ++ + VG + + L +
Sbjct: 24 VVAVLIALWLAVQARL-ERGAEVEITF-ENASDIIAGQTQIKLKEVNVGEVTKVRLSPD- 80
Query: 78 PNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI--ATERNQ 133
H + A + D L +T + T ++ L TL I A E
Sbjct: 81 LKHVVVTAQLDRDMTPHLSENTRFWVVTPRVSATGVSNLGTLISGVYIIMDPGAAGEYQT 140
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R G + + S I I + + + + +
Sbjct: 141 RFQGLDEAPGFESDEPGTQYVLQAEELGSLDIGSPIYFRQIRVGEVTGYKLSGTMEHVDI 200
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF 253
I + T + + F + +M L +N N
Sbjct: 201 HMFIRAPYDSMVQTRSRFWNVSGFGVSINADGMKARMESLASLISGGIAFDNAAGFENVQ 260
Query: 254 VKSSDQVINTVHDVRETT--------QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
V D + + L + + + ++ +
Sbjct: 261 VAPDGHRFYLYPDRESVLEGRFNIKYYYQLKFSGSVRGLTVGAPVEFRGIKVGEVVDVVL 320
Query: 306 DSTSNMRSS------ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM--SKIN 357
S N+ S + R D +E + + + A L+ S+
Sbjct: 321 ASAENVSDSLLVYIAMEPERLEPDDSPTREEVDERMETMVNQGLRAQMSTASLITGSRFI 380
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
++ + + + + + + + L ++ + I +L
Sbjct: 381 DLVFVDDAEPVEFVRSENYSEIPTVPDSMEQLSSQATDILAKINKIPFDKIGT---ELAG 437
Query: 418 TVNHFDDCLNNFER 431
++ ++ L ++
Sbjct: 438 SLESLNNLLTTLDK 451
>gi|282866020|ref|ZP_06275068.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
gi|282559059|gb|EFB64613.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
Length = 381
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 31/315 (9%), Positives = 78/315 (24%), Gaps = 11/315 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
V G+ S +R G+ VG + + + + +
Sbjct: 30 KGTTTVTAYFDR-ATGVYPGSDLRILGVKVGTVASVEPRGQ---EVRVTLRLDEGVEVPE 85
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
A + L Y++L+ + A ATP I+ + S
Sbjct: 86 DAHAVVVAPSLVADRYVQLAPAYTGGARLEPGAVLPAA---HNATPVEIDQLYESITELS 142
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + + + + + + K + + + S
Sbjct: 143 TALGPEGANADGALSGLLETGSKNLKGNGKAIGDSIEQFGKATKTLDKSSDNLFDTLSYL 202
Query: 216 TFNTIT----DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
T D + + EN+ + + QV + R
Sbjct: 203 QTFTTMLKENDGDVRAAEQQLNSVTGFLADDKENLGAALKELGTALGQVKGFIQKNRGAL 262
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ ++ + L D + + + L + ++ + +
Sbjct: 263 KKNVDLLVPLTQTLVDQRASLAESLDTLPLTAGNVLNAYDPANRTLNGRTNLNELSMGGP 322
Query: 332 INTIENITSNLNDSS 346
+ E + L+ +
Sbjct: 323 LLDPEQGVTGLDGLA 337
>gi|115379772|ref|ZP_01466844.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein, putative [Stigmatella aurantiaca DW4/3-1]
gi|310821470|ref|YP_003953828.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein [Stigmatella aurantiaca DW4/3-1]
gi|115363219|gb|EAU62382.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein, putative [Stigmatella aurantiaca DW4/3-1]
gi|309394542|gb|ADO72001.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein [Stigmatella aurantiaca DW4/3-1]
Length = 507
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 47/354 (13%), Positives = 101/354 (28%), Gaps = 16/354 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ VGL V++ F + + N D + GLS S V+
Sbjct: 1 MKKLVTPFRVGLLVIAAGAFFLAFFLFSQKGNLSDDESVGIWAYF-RDASGLSPKSRVQI 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
GIPVG I + L+ + I+ + T R++ L G ++L+ ++
Sbjct: 60 AGIPVGVISNITLEG---TRAKVFLRIQKGVDMRQDAVITKRSESLLGDFLLDLNPGTEQ 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ R + A+ IQ++ + + L
Sbjct: 117 APPLEPGGQIRRVIDSQGMEAVFESLGQITAD------------IQQVTGALREVLGGER 164
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
V + F ++ + L + +A + V+
Sbjct: 165 GTGSLQRIVENTVKLSDAVNEMVRINGERLNSILINFEGVSADVRGLTRENQAEVTRIVS 224
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I + V + ++E ++ K+D L + S +
Sbjct: 225 NIEYITKDVREVLGSVKKIVGSNEEGLQEGVGNLKDSLAKLDRTLGNLESITTTVREGEG 284
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ + ++ E ++ + T + S + + +S
Sbjct: 285 VVGTLLQDRQLGQKLTETVEDVADYASRLTGLQTEVGVQSAWLMTQGRSKNTVS 338
>gi|117164587|emb|CAJ88133.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
Length = 403
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/324 (12%), Positives = 91/324 (28%), Gaps = 6/324 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V + V L ++V+ N + VGR+ + LD + + I
Sbjct: 48 LPGGADLGSHPYTVSAEL-DDVLSLVPQAAVKVNDVAVGRVTEIRLDGDD-WSARVTMEI 105
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
D L TA + L G Y++ + + A R +
Sbjct: 106 NGDVRLPADATARLEQSSLLGEKYVQLSAPAEPAAGRLADGAVIPLVRTGRNTEVEEVFG 165
Query: 147 FISNA--ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+S ++ ++ + K + E + + + +E + L ++ I +
Sbjct: 166 ALSLLLNGGGVNQLKTITQELNKALGGREPEVRSMLRRVEKLVGNLDDHRGDITDALDAV 225
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS-NNFVKSSDQVINT 263
+ + S + +L ++ S +
Sbjct: 226 NRLSSTLAGRKDDVRTVLTDLSPGLKTLHEQRGSLLTMLRSLDTLSGVAVSTVEASKDDM 285
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
V D++ T + + L + T L + N+ +++A
Sbjct: 286 VADLKAIAPTLKALADAGTDLPDSLQVLLTYPFTDEVLNGVKGDYLNVYLTMTAAPGTQI 345
Query: 324 QRQKIISTINTIENITSNLNDSSQ 347
+ + + DS+
Sbjct: 346 IPPLVPRSTPSPSASPQRGRDSAS 369
>gi|282891608|ref|ZP_06300099.1| hypothetical protein pah_c180o102 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498576|gb|EFB40904.1| hypothetical protein pah_c180o102 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 403
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 55/401 (13%), Positives = 137/401 (34%), Gaps = 28/401 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +G+FV+ F + +L + +R +D +S + V F
Sbjct: 1 MADQAKNLIIGIFVIVAFAIVIFMLLFLH--PSVGDEGKRLRVRFSD-IDKISIGTRVNF 57
Query: 61 NGIPVGRIVGL---------FLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G PVG + + + ++ + + L+ ++ + ++RT GL G
Sbjct: 58 GGKPVGEVADIRELQEAIEERIGRDGHVYIYELELLVDSAVNVFNTDEISLRTSGLLGER 117
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ I + + Q+ I + E+T K + + + ++
Sbjct: 118 SVA----------ITPLPPKEGQKLEIVNDQVIYANESGSVEDTIKDLKGVAIKLDLALD 167
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+I + L E + L +++ ++ M S++ N + +T+ +
Sbjct: 168 SISRALNAM--EEENVWRNLGDSMQNLSDMTAALNKPDTISETLNNLHDVTEKFGESWEK 225
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + V+ ++++ K I T ++ KI LLS
Sbjct: 226 VDELLDNLVSTTSNTKAMTNDG--KEVFASIKEGKGSLGTLLMKDDLNLKISSLLSKGEI 283
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREIT-DQRQKIISTINTIENITSNLNDSSQKF 349
M L ++ +R+ + + ++ + I+ I+++L+ S
Sbjct: 284 LMNDVNHYGILFHLDKQWQRLRARRLNLLQKLCSPQEFRNFFNDEIDKISTSLSRVSMVL 343
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
E + + +F + R + + + + N+ +
Sbjct: 344 DETGCNPPCLLENAQYKKVFAELLRRLASTEEALKMYNQQV 384
>gi|268590739|ref|ZP_06124960.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Providencia rettgeri DSM 1131]
gi|291313511|gb|EFE53964.1| toluene tolerance ABC transporter, periplasmic substrate-binding
protein [Providencia rettgeri DSM 1131]
Length = 167
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+SK VG F++ + F ++ I ++ GL S ++
Sbjct: 1 MQSKKSEIWVGCFMLLAIAAIIFLCLKVADLKSIGSQSTYQISASFENIGGLKEGSPIKV 60
Query: 61 NGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD++ L D + S++ +IRT GL G YI ++
Sbjct: 61 GGVVVGRVASITLDKKNYVPEVKIDLLSEYD-NIPDSSSLSIRTSGLLGEQYIAMNIGPD 119
>gi|54027602|ref|YP_121844.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54019110|dbj|BAD60480.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 368
Score = 66.9 bits (160), Expect = 6e-09, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 68/277 (24%), Gaps = 7/277 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
VV L + + ++ G+ + V G+ VG + +
Sbjct: 17 VVIGAAALTLGSCSLLPDSVSLQDKTRITADF-ENIAGIYEGNPVTVLGLEVGTVDKIVP 75
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
I D + A I + + +IEL+ + + + +
Sbjct: 76 ---KGTLVEVHMTINGDVKIPADAEAAIVSPSIVTNRHIELTPVYTQGEEMADGTHLPKA 132
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R P ++ I + + + + N E I L
Sbjct: 133 RTRT---PVELDTLIKTIDQFAAALKPQEGSEGLGPLSGRVLYPMLDGNGEKIRDTLNAL 189
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF 253
+ + + N T+ + Q + E
Sbjct: 190 SGALKVGVDNKDAISNIIVKLNELTTMLAENDQSVRDFSNRVTQMSGLLAEQAPGLQATL 249
Query: 254 VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + ++NT Q + ++ + +
Sbjct: 250 DQLNAFLVNTSTTFAGHQDELQGTLTGLTNVTNQLRA 286
>gi|322515302|ref|ZP_08068299.1| ABC superfamily ATP binding cassette transporter, binding protein
[Actinobacillus ureae ATCC 25976]
gi|322118678|gb|EFX90890.1| ABC superfamily ATP binding cassette transporter, binding protein
[Actinobacillus ureae ATCC 25976]
Length = 174
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFV+ L F ++ + + ++ GL + ++ G+ VG
Sbjct: 8 EFWVGLFVLLGLAALVFLGLRVANVQGFTSEKTYTLYATFDNIGGLKVRAPIKVGGVVVG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
R+ + LD + + D + +++ +I+T GL G YI L+
Sbjct: 68 RVAEINLDAQTYTP-KVTLAVNEDFNKIPDTSSLSIKTSGLLGEQYIALNIGFM 120
>gi|197122405|ref|YP_002134356.1| hypothetical protein AnaeK_1999 [Anaeromyxobacter sp. K]
gi|196172254|gb|ACG73227.1| Mammalian cell entry related domain protein [Anaeromyxobacter sp.
K]
Length = 567
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 35/368 (9%), Positives = 101/368 (27%), Gaps = 5/368 (1%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VG+ V L F+ + + + V R GL+ S V+
Sbjct: 1 MKPAVNKALAVGVLVAVGLAAFLFAFTFFKKGGYSEADSYLVYARFSD-ATGLTWKSKVQ 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI VG + + LD+ +L + I PL+ +
Sbjct: 60 IAGIQVGEVAKISLDKN---KALLQIRIDRSVPLHTDACLYKSFPSALLPDALLEVIAGS 116
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + E + + + + + + + + + K ++ + L
Sbjct: 117 DAAPLLSSLPEAEREIKCVREATSVQQLLDSMAKIASDVQLVTGDLAKTVQGDQGSLREI 176
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ N+ I+ + ++ + + + D + +L
Sbjct: 177 VENLARITRQVDQVVAQNSANLSELIANTRDFTADLREISARDKDRIHSILANVDELTAR 236
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ + S + + +
Sbjct: 237 LKVAAGSLQGILDGGGSGAPGGGPPGAPGAPGAPGAPGAPGAPGTAGATPAVASQQAQAK 296
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
++ ++ S + + + + + + T E + L + + ++ + ++ +
Sbjct: 297 GVQQAVARLNDSLSRLDQLLAKVQEGKSVAGRLLTDEKMGRQLGTAVEGVSDYVDRLQKM 356
Query: 360 SALKENNS 367
+ S
Sbjct: 357 QIEVQLRS 364
>gi|124006548|ref|ZP_01691381.1| mce related protein [Microscilla marina ATCC 23134]
gi|123987961|gb|EAY27641.1| mce related protein [Microscilla marina ATCC 23134]
Length = 323
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/268 (11%), Positives = 93/268 (34%), Gaps = 5/268 (1%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
+ +L SN + ++ + GL+ + V NG VGR+ + + Q+ N
Sbjct: 21 YLGFNFLKGSNFFSSANHYYVMY--SDIKGLTVSNPVTVNGFQVGRVREIKILQKDNNKM 78
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
+ +R D L + + + L + L+ + + +
Sbjct: 79 MVDVALRGDLVLGKDASIKLGSVDLLSGMQLMLNVGKADLNNPDNNLQHGDTIKNAAYMD 138
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
++ + E +KKI + ++ ++++ + T + +++ + +
Sbjct: 139 GMLDKVTKHVEPLTKKIDSTLIYVNELLKELGGTGTKVKEVLSNTASLTGTLDNTLKT-- 196
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ + + K+ ++ + S+ +I +D + + + Q+
Sbjct: 197 QGSNIDVIMRNLKSLSVSLIETEKSVKPIIAKVDNIASKAEKLELDKTIQKVENTVAQLN 256
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V + T ++ + D L ++
Sbjct: 257 EVIETVNQGQGTLGKLIKN-DSLYNNLE 283
>gi|320007317|gb|ADW02167.1| virulence factor Mce family protein [Streptomyces flavogriseus ATCC
33331]
Length = 380
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 21/269 (7%), Positives = 62/269 (23%), Gaps = 9/269 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
D V G+ S +R G+ VG + + E + D +
Sbjct: 27 LDQDGTTVTAYFDR-ATGVYPGSDLRILGVKVGTVESVTPRGE---EVRVTLRLDKDVDV 82
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER-----NQRAMITATPSGINYFI 148
A + L Y++L+ + A + S
Sbjct: 83 PADAHAVVVAPSLVADRYVQLAPAYTGGARLEGGAVLPAANNATPIEVDQLYESITEIST 142
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + + ++ +N++ +IE + T
Sbjct: 143 ALGPDGANADGALAGLLETGSKNLKGNGEAIGDSIEQFGKATKTLDKSSGNLFDTLSYLQ 202
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + + + ++ + + ++
Sbjct: 203 TFTTMLKEKDGDVRAAEQQLNTVTGFLADDKENLSAALKELGTALGQVKTFIQKNRGALK 262
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + Q + + + + +
Sbjct: 263 KNVDLLVPLTQTLVDQRASLAESLDTLPL 291
>gi|240170715|ref|ZP_04749374.1| virulence factor Mce family protein [Mycobacterium kansasii ATCC
12478]
Length = 375
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 87/272 (31%), Gaps = 13/272 (4%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ + GL T ++V+ +G+ G++ + LD L + + L
Sbjct: 39 FVKAGRDYSAYFAE-AGGLQTGTTVQVSGLKAGKVNSIALDGP---KVLVRFEVDKHIRL 94
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T A I+T+ + G +E++ + + T S + +
Sbjct: 95 GDRTEAAIKTKSVLGARILEITP---------RGEGRLTGPIPLERTTSPYQLPDALGDL 145
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + + + + + + T ++ +A +++ + +++
Sbjct: 146 GATISGLDTDKLSESLAVLADTFSGTAPDLRIALAGVARFSQTLNERDAQLRNLLSNANK 205
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
T + + L ++ + S N S Q+ + D R+T
Sbjct: 206 ATTVLSERSEQIARLVADSNALLAQLESQSRALDAISGNISAISRQIKGFIADHRQTLNP 265
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ ++ ++ + +++ ++
Sbjct: 266 ILDKLDRVLTIVDNRKQRIQLAIKKFNDYALS 297
>gi|118616268|ref|YP_904600.1| MCE-family protein Mce2A [Mycobacterium ulcerans Agy99]
gi|118568378|gb|ABL03129.1| MCE-family protein Mce2A [Mycobacterium ulcerans Agy99]
Length = 401
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 52/135 (38%), Gaps = 11/135 (8%)
Query: 1 MESKNYY--TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDS 56
M+ ++ +GL + +L F +YW + P + + P GL +
Sbjct: 1 MDPRSRPPCKIIGLAALMVLVFFGAMLYW--QFRGTFIPKTRLTMIAPR--AGLVTDPGA 56
Query: 57 SVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
V FNG+ +GR+ + + + + + P + + +ATI+ + G Y+
Sbjct: 57 KVTFNGVQIGRVSSITEVTHDGAPAARFALDVTPKYIGSIPANVSATIKATTVFGNKYVS 116
Query: 114 LSTLRKEKKTIFQIA 128
L++ A
Sbjct: 117 LTSPTDPAPQHITPA 131
>gi|254821571|ref|ZP_05226572.1| hypothetical protein MintA_16677 [Mycobacterium intracellulare ATCC
13950]
Length = 348
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 65/258 (25%), Gaps = 7/258 (2%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ L + + GI VG + + LD + H A +R
Sbjct: 40 GIKLLGVGYTHYTAEFLQAAT-LRPGNPITIAGIEVGHVTSMKLDGD---HVEAGLSVRD 95
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA---TPSGINY 146
+ L T A I+ + G Y+EL I + +
Sbjct: 96 NVALGKDTRAVIKVMTILGSRYLELVPDGPGSIPGKTITLSHTAVPYDLQSLLEDATTTF 155
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+++ ++ ++ + + + + + + + + +
Sbjct: 156 EQVDSDQFAQSLAVLGKQLGGVPPLVPQAVANLQTLSTITADRRGQLGTLLKSTQRVVNT 215
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + +A + E + V + + +
Sbjct: 216 LRRQQTNIGHLMDQGQDLLGHLVARQATFHAMFAALTELVDQLDKVVVTNRPMLDELFVN 275
Query: 267 VRETTQTFQEVGQKIDHL 284
+ + T + + +
Sbjct: 276 LHDLTNMIGQHDDLVRNT 293
>gi|88857547|ref|ZP_01132190.1| putative paraquat-inducible protein B [Pseudoalteromonas tunicata
D2]
gi|88820744|gb|EAR30556.1| putative paraquat-inducible protein B [Pseudoalteromonas tunicata
D2]
Length = 554
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 33/403 (8%), Positives = 114/403 (28%), Gaps = 23/403 (5%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + V + G VG++ D QE + ++ + + +
Sbjct: 167 IDVGTGVFYKGFKVGQVETATFDWQEQTMRYGLFIQAPYQNLITLNSVFWVHSGIEVDLN 226
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+S I + + I + + K + +
Sbjct: 227 ADGISIKTGSLSKILKGGISFTVPEREKPGEIAQDGHIFSLSDDYKTALEQRYYEHDYYV 286
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + + ++ P T++ M
Sbjct: 287 IEFEQSIRGLRVGAPVEYRGTRVGTVVEA--------PAILVVDGKPAHFMSDNTAVPVM 338
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
IK + ++ + +N K D + + D
Sbjct: 339 IKIEYRRLYHEAKVAKEFWQSNSQKWIDNGLRASLKPGNLLTG---------AVYVDLDF 389
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+++ + ++ S S + + I+ ++ + + LN + ++
Sbjct: 390 YPDAEQKQPKMLANYRVFPSISSGFSVLTNQLSEVMAKINKLDVEKTLV-QLNSTVAEYE 448
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG--LNDI 408
+L + + + + + +++ + + +R + + ++ Q +D+
Sbjct: 449 KLAADLRVFVNQSKTQQIPAELSQSLDKITSSMSQFDRTMKQFAKTMADYQQGSPVYHDM 508
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
V ++++ + P +++ +K +++ +P+
Sbjct: 509 NRAVEEMKKLAEQLQPLGKSLNEQPNMLIF--DKKTIEDLQPR 549
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/272 (8%), Positives = 70/272 (25%), Gaps = 13/272 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+I S+ GL + V + G VG +V ++ +P + +
Sbjct: 281 EHDYYVIEFEQSIRGLRVGAPVEYRGTRVGTVVE--------APAILVVDGKPAHFMSDN 332
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
T + + Y E ++ ++ Q + RA + + +
Sbjct: 333 TAVPVMIKIEYRRLYHEAKVAKEFWQSNSQKWIDNGLRASLKPGNLLTGAVYVDLDFYPD 392
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + ++ + + N ++K + T +
Sbjct: 393 AEQKQPKMLANYRVFPSISSGFSVLTNQLSEVMAKINKLDVEKTLVQLNSTVAEYEKLAA 452
Query: 217 FNTITDLITSLDKMIKAIDL-----QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + ++ + + + Q HD+
Sbjct: 453 DLRVFVNQSKTQQIPAELSQSLDKITSSMSQFDRTMKQFAKTMADYQQGSPVYHDMNRAV 512
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ +++ +++ L + +
Sbjct: 513 EEMKKLAEQLQPLGKSLNEQPNMLIFDKKTIE 544
>gi|326382585|ref|ZP_08204276.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198704|gb|EGD55887.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 332
Score = 66.9 bits (160), Expect = 7e-09, Method: Composition-based stats.
Identities = 24/250 (9%), Positives = 70/250 (28%), Gaps = 6/250 (2%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
G+ VR GI VG + L + H + D +
Sbjct: 43 GKRTYTADFEQ-AGGIRPGDKVRVAGIDVGEVSKTELAGD---HVTVDMKVDKDVEVKED 98
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA--ENT 154
+A I+ L G Y+++ +K + + T ++ +
Sbjct: 99 GSAEIKMSTLLGQRYVDVVLGSSDKAAPDDRIQQTYVPYDLQKTLEKGTPVLAGIKPDEL 158
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ I S + + L + ++ + T+ S +
Sbjct: 159 TNSIRTLSSQLSGAPAIMGPTLDALTRMSDVLNNRHDQINQLLKDTDAVTKQVVDSQFAL 218
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + + + + + ++ + ++ ++ D+ + ++ +
Sbjct: 219 SIIVGQGAQLANKIVAREQLVTRMLDGVAALTDQATAVAAENGDKFAPVMANLNTISNGL 278
Query: 275 QEVGQKIDHL 284
++ + L
Sbjct: 279 EKNRDNLRKL 288
>gi|207724021|ref|YP_002254419.1| hypothetical protein RSMK01529 [Ralstonia solanacearum MolK2]
gi|206589229|emb|CAQ36191.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 517
Score = 66.5 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/409 (9%), Positives = 102/409 (24%), Gaps = 38/409 (9%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + R GS++ S V + + VG++ L + + + P +
Sbjct: 147 GARYRLHARSLGSIE---VGSPVYYGHLDVGQVTATDLAPDGKG---VSIEVFVEAPYHH 200
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+A R G + + PS +
Sbjct: 201 YVSAQTRWWNTGGGSSSRDAQGFPSGMQSLTAMLLGGLAFQSPPGPSRNQAAPAGTAFEL 260
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + ++ ++ + ++
Sbjct: 261 --------AEDGPAVPEPPAGAPAVVVMRFAQSLRGLSVGAVVDFRGLAFGEVTKIGIEH 312
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ + Q E+ + + +R
Sbjct: 313 AVGKREPAMLVTMNLYPDRLGQPFRDSAEHADTVAGKALLRKLVAYGLRGQLRTGNLLTN 372
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
++ +D + +++ + L + ++ +++++I I D+
Sbjct: 373 QLYVALDLFPNTLPARLDLNRSPVELPTVPNTLDDLQAAIGEIMRTLDRAPMGPVGTELS 432
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
+ + L ++ L A+ + T + ++ +
Sbjct: 433 RSFV--------QARRLFKLLD--------TQLAPRARETLATAKQGFDEAEAALNP--- 473
Query: 396 NLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
S S D+Q +L + E+ P+ IVWG+ S
Sbjct: 474 -----SPSLQTDLQPTQERLARAQQTLETLAKAIEQRPETIVWGKTPVS 517
Score = 44.2 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 8/101 (7%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
+K + L V + + W + E+ I +GL + + VRF
Sbjct: 2 TKAGAAYLWLVPVLVALIGMARLLWFAYEG-----GPEITISFLD-AEGLESGRTPVRFK 55
Query: 62 GIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATI 101
+ VG + + ++ + + T I
Sbjct: 56 DVEVGTVTAVHPSHDHKRVLASVRLTKAAANVAVKDTRFWI 96
>gi|118466040|ref|YP_881280.1| virulence factor Mce [Mycobacterium avium 104]
gi|118167327|gb|ABK68224.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 377
Score = 66.5 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 31/278 (11%), Positives = 85/278 (30%), Gaps = 8/278 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+ + + ++ + + G+ ++VR +G+ VGR+ L L
Sbjct: 4 VLGTVILACVTVVAFQYNKLPFIKNTDDYAAYFSEAGGIKPGNAVRVSGMGVGRVSDLRL 63
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ +R L T A I+T+ + G +EL+ + +
Sbjct: 64 EG---TKVRIGFTVRKGVVLGDRTEAAIKTETILGAKMLELTPRGDGRLSGVIPLERTTS 120
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
+ + IS + + S + + + ++ ++ ++
Sbjct: 121 PYDLPDALGDLTTTISGLDT-----TQLSAALTTLADTLKATPENLKPALQGVARFSDTL 175
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF 253
S ++ H S + + + + A L + + + + +
Sbjct: 176 NSRDAQLRSLLGNANHVSAVLGRRSQQIAGLVANSNALLAALLDERDSLDALMNHLTAVS 235
Query: 254 VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ S V + ++ V + +D+ +
Sbjct: 236 HQISGLVNDNRTQLKPALDKLNGVLEILDNRKEELQKT 273
>gi|54027603|ref|YP_121845.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54019111|dbj|BAD60481.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 332
Score = 66.5 bits (159), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/309 (14%), Positives = 97/309 (31%), Gaps = 13/309 (4%)
Query: 1 MESK---NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M + N Y +G V + S E+ G+
Sbjct: 5 MRRRFDSNRYFWLG---VLGAILVVVLLAVSSVFRLLGVGQQEIKAEFVQ-AAGIKVGDK 60
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V G+ +G + G ++ + H L + L P A+I+ L G Y++L
Sbjct: 61 VNAAGVSIGTVSGAEIEGD---HVLLTLNVDKSVELGPDAKASIKMATLLGARYVDLVPG 117
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN---IEK 174
+I A I +T+K + Q++ ++ +
Sbjct: 118 DGSGLPDGRIPVSNTTVPYDLADVVQIGTPKFEELDTAKLAESLNLINQQMGDSPQLTAQ 177
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
L + A + I T + + + T + + +S T + I + + +
Sbjct: 178 ALDSVGALAKIIDTRREQVDTLLKDLDRVTGILADNRNSVLLVITQGEAIANRVMERQDL 237
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
Q ++ I + +++Q+ T+ + + Q+ +D LLS ++
Sbjct: 238 LRQLLDNIATLTRQLQQIGADNNNQIGPTIDQLNTMAEGLQKNKDNLDRLLSILPPSLRY 297
Query: 295 KETSAFLEN 303
S
Sbjct: 298 LSNSWGGNG 306
>gi|315445480|ref|YP_004078359.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315263783|gb|ADU00525.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 487
Score = 66.5 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/323 (8%), Positives = 86/323 (26%), Gaps = 9/323 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
Q+ P ++ S + VR G+ VG I + + I D
Sbjct: 32 YQQFFSPYT--VVAYFRSATAIYAGDEVRVAGVRVGTIEAIEPQG---TRAKMTMAIDHD 86
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR--AMITATPSGINYFI 148
P+ A I L Y++L+ TA P +
Sbjct: 87 VPVPADAEAIIVAPNLVSARYVQLTPAWGATPETSGPIMVDGAEIGQDRTAVPVEWDEIK 146
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ ++ + + + + + +S + +++
Sbjct: 147 QQLTRLATELGPTGGVSETSLGRFIDTTAGAMDGNGEKLRETISQLSGVARVLGEGSGDI 206
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ +++ + L V Q+++ + N+ + + + + R
Sbjct: 207 VEVITHLETFVTALRDSNVQIVQFQDRLADVTQVVDGSRSELNSAITTLSEAVG--EVQR 264
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ + +++ L + + + A + +I +
Sbjct: 265 FVGGSRSQTAEQVQRLANVTQVLADDSLVLKNILHAAPNALVNGYNIYNPDTGGPRGSFA 324
Query: 329 ISTINTIENITSNLNDSSQKFAE 351
++ + + + + +
Sbjct: 325 MNNFSNPVTLICSAIAAVENVTA 347
>gi|296169584|ref|ZP_06851204.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895850|gb|EFG75545.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 546
Score = 66.5 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 45/135 (33%), Gaps = 5/135 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F + + + +L V + +P GL S+V
Sbjct: 1 MLTRFVRIQLAIFTIVGVVGVIVMAFAYLQAPVLLGVGRMTVTLDLPA-GGGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ G+ VG++ + L P + A + + A +R+ G Y++L
Sbjct: 60 YRGVQVGKVTAVAL---TPRGATATLSLGSSPKIPADLQAEVRSISAVGEYYVDLRPRTD 116
Query: 120 EKKTIFQIATERNQR 134
+ +
Sbjct: 117 SPPYLHDGSVIAAGD 131
>gi|165976710|ref|YP_001652303.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|303250628|ref|ZP_07336825.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|307246208|ref|ZP_07528289.1| hypothetical protein appser1_14120 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307250542|ref|ZP_07532486.1| hypothetical protein appser4_13220 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|307252925|ref|ZP_07534813.1| hypothetical protein appser6_14360 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|307255188|ref|ZP_07537006.1| hypothetical protein appser9_14240 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259626|ref|ZP_07541350.1| hypothetical protein appser11_14240 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|165876811|gb|ABY69859.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|302650616|gb|EFL80775.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306852817|gb|EFM85041.1| hypothetical protein appser1_14120 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306857435|gb|EFM89547.1| hypothetical protein appser4_13220 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306859563|gb|EFM91588.1| hypothetical protein appser6_14360 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306862061|gb|EFM94037.1| hypothetical protein appser9_14240 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866271|gb|EFM98135.1| hypothetical protein appser11_14240 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 175
Score = 66.5 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFV+ L F ++ + + ++ GL + ++ G+ VG
Sbjct: 8 EFWVGLFVLFGLAALVFLGLRVANVQGFTSEKTYTLYATFDNIGGLKVRAPIKVGGVVVG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
R+ + LD + + D + +++ +I+T GL G YI L+
Sbjct: 68 RVSDISLDAQTYTP-KVSLAVNEDFNKIPDTSSLSIKTSGLLGEQYIALNVGFM 120
>gi|86132287|ref|ZP_01050882.1| ABC transporter, periplasmic binding protein [Dokdonia donghaensis
MED134]
gi|85817206|gb|EAQ38389.1| ABC transporter, periplasmic binding protein [Dokdonia donghaensis
MED134]
Length = 314
Score = 66.5 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 3/112 (2%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
F +L +N D +V+GL+ S V NG+PVGR++ + + +
Sbjct: 20 FGYNYLKGNNLLDKSKILYAKY--DNVEGLAPSSQVTINGLPVGRVLSIDFA-DSSGKLV 76
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
K ++ D + A + GL G + + ++ + T +
Sbjct: 77 VKFVVEKDFEFSNQSLARVYGGGLIGGKSLAIVPTYEKGQNAKTGDTLPGEM 128
>gi|32035038|ref|ZP_00135104.1| COG1463: ABC-type transport system involved in resistance to
organic solvents, periplasmic component [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208756|ref|YP_001053981.1| hypothetical protein APL_1290 [Actinobacillus pleuropneumoniae L20]
gi|190150610|ref|YP_001969135.1| hypothetical protein APP7_1341 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|303252080|ref|ZP_07338249.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248315|ref|ZP_07530340.1| hypothetical protein appser2_12930 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|307257356|ref|ZP_07539126.1| hypothetical protein appser10_13540 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307263955|ref|ZP_07545558.1| hypothetical protein appser13_13630 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126097548|gb|ABN74376.1| hypothetical protein APL_1290 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915741|gb|ACE61993.1| hypothetical protein APP7_1341 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|302649062|gb|EFL79249.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855185|gb|EFM87363.1| hypothetical protein appser2_12930 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|306864206|gb|EFM96119.1| hypothetical protein appser10_13540 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306870717|gb|EFN02458.1| hypothetical protein appser13_13630 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 175
Score = 66.5 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/114 (21%), Positives = 46/114 (40%), Gaps = 2/114 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFV+ L F ++ + + ++ GL + ++ G+ VG
Sbjct: 8 EFWVGLFVLFGLAALVFLGLRVANVQGFTSEKTYTLYATFDNIGGLKVRAPIKVGGVVVG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
R+ + LD + + D + +++ +I+T GL G YI L+
Sbjct: 68 RVSDISLDAQTYTP-KVSLAVNEDFNKIPDTSSLSIKTSGLLGEQYIALNVGFM 120
>gi|111021673|ref|YP_704645.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110821203|gb|ABG96487.1| MCE family protein [Rhodococcus jostii RHA1]
Length = 430
Score = 66.5 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 38/360 (10%), Positives = 90/360 (25%), Gaps = 8/360 (2%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ P + GL + VR G+ VG I + + + ++ + A
Sbjct: 43 TITAYFPTT-TGLYSGDDVRVLGVKVGTIDSIEPGAD---FARVTMNVQKSVEIPADAKA 98
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
I L +++L+ + T+ A+ +R+ + I ++
Sbjct: 99 VIVAPSLVSGRFVQLTPVYAGGPTMGDGASIPVERSAVPVEWDEIKTELNKLSEALGP-- 156
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + I+ N E++ L + + + + TF
Sbjct: 157 QGADPQGSLGTFIDTAADNLDGNGESLRNTLRELSETMRTLSDGRTDLFSTIRNLQTFVA 216
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ N + N + + V E E
Sbjct: 217 ALSSSNEQIVQFEGRLASVSNMLATNSDELGTALNDLDLALGDVNRFVAENRAALSEQVG 276
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ K + L + +N + + + N + +
Sbjct: 277 RLADATQVL--ADKRPQIEQVLHVAPTALANFSNIYKPAQGSLVGAVAFANLANPVNFMC 334
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ A + + NSL + + I +L+
Sbjct: 335 GAIQSLQANEANRSADLCTQYLSPVLNSLTMNYLPVLTNPATGVNAFPDQIEYTPPSLEA 394
>gi|254774788|ref|ZP_05216304.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 377
Score = 66.5 bits (159), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/278 (11%), Positives = 86/278 (30%), Gaps = 8/278 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+ + + ++ + + G+ ++VR +G+ VGR+ L L
Sbjct: 4 VLGTVILACVTVVAFQYNKLPFIKNTDDYAAYFSEAGGIKPGNAVRVSGMGVGRVSDLRL 63
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ +R L T A I+T+ + G +EL+ + +
Sbjct: 64 EG---TKVRIGFTVRKGVVLGDRTEAAIKTETILGAKMLELTPRGDGRLSGVIPLERTTS 120
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
+ + IS + + S + + + ++ ++ ++
Sbjct: 121 PYDLPDALGDLTTTISGLDT-----TQLSAALTTLADTLKATPENLKPALQGVARFSDTL 175
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF 253
S ++ + H S + + + + A L + + + + +
Sbjct: 176 NSRDAQLRNLLGNANHVSAVLGRRSLQIAGLVANSNALLAALLDERDSLDALMNHLTAVS 235
Query: 254 VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ S V + ++ V + +D+ +
Sbjct: 236 HQISGLVNDNRTQLKPALDKLNGVLEILDNRKEELQKT 273
>gi|331699191|ref|YP_004335430.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953880|gb|AEA27577.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
Length = 443
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 25/293 (8%), Positives = 76/293 (25%), Gaps = 13/293 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + L V + + + + V + L D++V G+
Sbjct: 8 RARMQILALVSVVAVLLAAGIWLATGGTGR------RVTAYFT-NASALFDDNAVTVLGV 60
Query: 64 PVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG I + I PD L A + + L Y+EL+ +
Sbjct: 61 NVGTIDKITPQG---TQVRVDMTITDPDVQLPADVKAVVVSPSLVTGRYVELAPVWTGGP 117
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ A +R + ++ + + + + + + + N
Sbjct: 118 RLADGAVIPLERTAVPLGVDDLSRTATQLADALGP--NGANKTGALSDVLGVAAANLDGN 175
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ ++ + N + ++ + + +
Sbjct: 176 GQALNDTIHNLGQLSTTLSGSSDDLFGTITQLQKVTETLKNDDGTVREFTDRLDSVTRTL 235
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + S + + + + K+ + + + ++
Sbjct: 236 ADQREDLGGALQELSLALGEVQAFIADNRAALKSDVDKLTDVTGTLADEQRAL 288
>gi|300784340|ref|YP_003764631.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793854|gb|ADJ44229.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 409
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 4/115 (3%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ ++ G V+ G+ +S V + G+ VGR+ + L + I
Sbjct: 28 AGLDRLFGNRGYVVTAQLTDSGGIFVNSEVAYRGVTVGRVTSMTLTEHG---VDVALDID 84
Query: 89 PDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
P + A + + G +++L + + + + +P
Sbjct: 85 ASAPDIPADAHAQVANRSAVGEQFVDLLPQHNGGPFLKDGSVITPDKTSLPPSPD 139
>gi|29832438|ref|NP_827072.1| mce-related protein [Streptomyces avermitilis MA-4680]
gi|29609557|dbj|BAC73607.1| putative mce(mammalian cell entry)-related protein [Streptomyces
avermitilis MA-4680]
Length = 425
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/302 (13%), Positives = 96/302 (31%), Gaps = 5/302 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ +VG ++S F+ + L DG V + V L S+V+ N + VG
Sbjct: 12 WAAVGSLLLSGCEFNGWYDVQLPGGAAADGHAYHVTVEF-RDVLDLVPQSAVKVNNVTVG 70
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + LD H+ + + L + A +R + G Y+ LST
Sbjct: 71 AVEEVQLDG---WHARVRLRVADSVKLPANAVAELRQTSMLGEKYVALSTPPGTAPVGRL 127
Query: 127 IATERNQRAMITATPSGINY-FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+R + P +A ++ ++ + ++ + ++
Sbjct: 128 GDGDRIPLSRSGRNPDIEEVLSALSALLNGGGVAQLKTITVELNKALDGREDRVRSLLKE 187
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
++T + ++H + + + + +
Sbjct: 188 LNTFIGGLDGRRKDIIHALKAVDRLAGRLGKEKKTIAQAVDTMPPALKVLADQRRDLTRM 247
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ S + V + D + + + Q+++ +D + ++ T F N
Sbjct: 248 LTALSKLGTTGTKVVNASHDDTVANLKQLRPILQQLNKAGADLPNSLELLTTYPFPRNAV 307
Query: 306 DS 307
D+
Sbjct: 308 DA 309
>gi|311107173|ref|YP_003980026.1| Mce related family protein 2 [Achromobacter xylosoxidans A8]
gi|310761862|gb|ADP17311.1| Mce related family protein 2 [Achromobacter xylosoxidans A8]
Length = 549
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 43/415 (10%), Positives = 102/415 (24%), Gaps = 36/415 (8%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + R GS L S V F I VG++V LD + I
Sbjct: 169 GKRYTLKARDLGS---LDIGSPVYFRRIAVGQVVAYHLDSSGEG-VNVQVFIDA----PN 220
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
T+ + R + + S ++ + +
Sbjct: 221 DDFVNSATRFWNASGVDFSV----------------DARGLQVRSQSLLSVIVGGVAFDT 264
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ I A + + + + +
Sbjct: 265 IERHAHVTAKADTEFTIFPSEGAARAQPDGAPLHIRMRFDQSVRGLVVGAPIDAYGAAIG 324
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
++I K A+ V Q S + + +
Sbjct: 325 QVDSIRLEFDPAIKQFYALVGATVYPERLGAQTVEEIKEYSGSTLEHPNGKLLAALIK-- 382
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
L + + + + I + I
Sbjct: 383 ------QGLRAQLRIGNLLTGQLYVALAVFPEAEPVSFKMEEDPFIPTVPNNLDQLQQQI 436
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
+I + L+ F L + + + + D + + + + + ++G+
Sbjct: 437 NSILTKLDRVP--FEGLGADLGQLLRATSSLMKRLDTR-LAPEAQAMLRQAGKSLAAVGS 493
Query: 396 NLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
L + L + ++++L T + + + +P+ ++ GR + +P
Sbjct: 494 VLSPDAGLPL-NANAVLQELSRTARSLRELADYLQAHPESLLRGRAPDAQYQRQP 547
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 39/445 (8%), Positives = 94/445 (21%), Gaps = 28/445 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + L + + + R GP A + + +GL + VR+
Sbjct: 18 RRRLSWIW-----LVPLIAALGGLALVVRVWMEAGPTATIS---FQTAEGLEAGKTQVRY 69
Query: 61 NGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ VG + + L+ + + + L T + L +
Sbjct: 70 KEVNVGVVERVALNSDRSGVVATVRINKEAGSLLQEGTVFWVVRPRLT-------LSGVS 122
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
T+F A + + K + L +
Sbjct: 123 GLSTLFSGAYIGVDPSDRFRQEGESRATKYSFVGLETPPEVPQDRAGKRYTLKARDLGSL 182
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+A + + + + + T
Sbjct: 183 DIGSPVYFRRIAVGQVVAYHLDSSGEGVNVQVFIDAPNDDFVNSATRFWNASGVDFSVDA 242
Query: 240 NQILENIQVSSNNF------VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ Q + T E T E + + +M+
Sbjct: 243 RGLQVRSQSLLSVIVGGVAFDTIERHAHVTAKADTEFTIFPSEGAARAQPDGAPLHIRMR 302
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
++ L A + + + I + +Q E+
Sbjct: 303 FDQSVRGLVVGAPIDAYGAAIGQVDSIRLEFDPAIKQFYALVGATVYPERLGAQTVEEIK 362
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND-----I 408
+ L ++ + + + I
Sbjct: 363 EYSGSTLEHPNGKLLAALIKQGLRAQLRIGNLLTGQLYVALAVFPEAEPVSFKMEEDPFI 422
Query: 409 QNLVRKLQETVNHFDDCLNNFERNP 433
+ L + + L +R P
Sbjct: 423 PTVPNNLDQLQQQINSILTKLDRVP 447
>gi|148261075|ref|YP_001235202.1| hypothetical protein Acry_2084 [Acidiphilium cryptum JF-5]
gi|146402756|gb|ABQ31283.1| Mammalian cell entry related domain protein [Acidiphilium cryptum
JF-5]
Length = 541
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 28/391 (7%), Positives = 97/391 (24%), Gaps = 23/391 (5%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ST + + + G +G + + L ++ + I T+
Sbjct: 170 ISTGAGIFYKGFRIGTVRKIALGPNGGGFAI-------GAFISRRYQRLITTRSRFWNA- 221
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ A+ R + + P+ ++ + + + +
Sbjct: 222 ----------GGVRVTASGGGPRLAMQSVPALVSGALGVTTPPGGRQAIDGARFRLYPSA 271
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + T + + + +
Sbjct: 272 AAARDAPGPHAVAYRTVLPGGPRGLAVGAPVTLEGATVGAVTGVAMAYAPRAGAIRSTVR 331
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
A+D ++ + ++ +R V + + L+
Sbjct: 332 FALDPSRIGLAGATWNLRHPRPQMNAMLARLIHRGLRAHLARATPVIGQQELALAIMRGA 391
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + A +S + + ++ A+
Sbjct: 392 APATLGKGVPPAVPAVAGGSIGRLMAEAGGILANLHAVSARLAALSRAPRTRAALKRLAQ 451
Query: 352 LMSKINNISALK--ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ + I+ + L D +R + + + I + G+ +
Sbjct: 452 TAANVAAITRTTRGQAPHLLADLRRTANEADEALRDLRGMIGAQGSAANAPESQTMP--- 508
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + +L + ++ +P ++ G+
Sbjct: 509 HTLYELGRAARALRELVDELNAHPNALILGK 539
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE- 76
+ + WL EV++ P + G+ + V + G VG +V + LD
Sbjct: 25 VAAALIVAWLG-VAALATRGPEVVVTFPIT-GGIRPGGTDVTYRGATVGHVVSVHLDASL 82
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ D L T I + ++
Sbjct: 83 AAMKVRLRFDPDMDGHLGRGTRYWIAGRHVS 113
Score = 41.1 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL---AKALIRPDTPLYPST 97
+PG GL+ + V G VG + G+ + ++ + + P
Sbjct: 285 YRTVLPGGPRGLAVGAPVTLEGATVGAVTGVAMAYAPRAGAIRSTVRFALDPSRIGLAGA 344
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
T +R + R + + + Q+
Sbjct: 345 TWNLRHPRPQMNAMLARLIHRGLRAHLARATPVIGQQ 381
>gi|68171467|ref|ZP_00544853.1| Mce4/Rv3499c/MTV023.06c protein [Ehrlichia chaffeensis str.
Sapulpa]
gi|88658343|ref|YP_507008.1| mce-related protein [Ehrlichia chaffeensis str. Arkansas]
gi|67999108|gb|EAM85773.1| Mce4/Rv3499c/MTV023.06c protein [Ehrlichia chaffeensis str.
Sapulpa]
gi|88599800|gb|ABD45269.1| mce-related protein [Ehrlichia chaffeensis str. Arkansas]
Length = 149
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 46/132 (34%), Gaps = 5/132 (3%)
Query: 3 SKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ GL V+ + N V P SVDGL +
Sbjct: 2 RRSNVIEIFAGLIVLVAAVSIGIIAFKKLPLNTTSHNCYIVKAHFP-SVDGLDIGDDITL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G+ +G + + LD+ Y I+ + L ++A++ L G +I+++ E
Sbjct: 61 SGVKIGTVTSISLDKNYSPT--VTMCIQKNILLPSDSSASLSLSNLLGRRHIDIALGSNE 118
Query: 121 KKTIFQIATERN 132
+ E
Sbjct: 119 DVIPVEGFIEHT 130
>gi|111019741|ref|YP_702713.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110819271|gb|ABG94555.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 331
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/297 (13%), Positives = 99/297 (33%), Gaps = 12/297 (4%)
Query: 1 MESKN----YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M +K+ +GL +++ +++ G + GL+
Sbjct: 1 MATKSFKERNPLHLGLIGTAVIAVLMVAVFNYQAIPFLTGGRT--VTGEFADASGLAAGD 58
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELS 115
V+ G+ +G + + L + + + I PD L T ATI+ + G Y+EL
Sbjct: 59 HVQIGGVEIGEVQSITLRPD---YVDIELRIDPDGRTLGARTRATIKVETALGRRYVELV 115
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE--NTSKKISDSSRHIQKIIENIE 173
+ A IT + S + + + S+ ++ S + + +N++
Sbjct: 116 PDGDGELGDTIPADRTTSGFDITDSLSRVTETLEGTDKSTASQALTSISELMNALPDNLK 175
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ +T+++ +D + V +++ T + + + A
Sbjct: 176 QSSDGIARIADTVASRDTQIRQLLDLSTSVSGVLSERNNNLTALITDGETLFAALNDRAA 235
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ QI + + + + ++ T + ID+ ++
Sbjct: 236 TIRSLLVQIRAVSEQIRGVVADNRESTAPMLAELDTVLTTLNQNYTNIDNAITGLRP 292
>gi|293606162|ref|ZP_06688526.1| paraquat-inducible protein B [Achromobacter piechaudii ATCC 43553]
gi|292815422|gb|EFF74539.1| paraquat-inducible protein B [Achromobacter piechaudii ATCC 43553]
Length = 525
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 29/402 (7%), Positives = 100/402 (24%), Gaps = 35/402 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQG 105
+ L S + + I VG++V L Q D + +T +
Sbjct: 157 NDLGSLDVGSPLYYRRIAVGQVVSYRLAQGGDGVDVQVFVDAPNDLYVNENTRFWNASGV 216
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+ L + ++ + P+ + +
Sbjct: 217 DFSVDARGLQMRSQSLVSVIIGGVAFDTLGQHERQPAAAGTAFPLFSSEESARAQPDGIP 276
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
++ ++ + + + + + + T
Sbjct: 277 LRVRMRFDQSVRGLVVGAPIDAYGVTVGKVDAINLDFDETAKQFYALVSATLYPERLGAQ 336
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ +++ + + ++ ++ N T + +
Sbjct: 337 TFERIKDFAGPDTRHPSGVLMAALVARGTRAQLRIGNL------LTGQLYVALAEFPNAK 390
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ N+ + S ++ + ++ + I + L +
Sbjct: 391 PVTFTMEDQPFIPTVPNNLDQLQQQLNSILTKVEKVP------------FDEIGTELAGA 438
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+ ++L+ +++ L +AQ + + + + + N
Sbjct: 439 LRGASKLVKRLDG--------QLAPEAQAVLRQANRSLAAVGALLAPESDLPVN------ 484
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+R+L + + +P ++ GR + +
Sbjct: 485 --TDTALRELGRAARSLRQLSDYLQAHPDALLRGRAQDAAPS 524
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/245 (11%), Positives = 56/245 (22%), Gaps = 12/245 (4%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH---SLAKALIRPDTPLYPS 96
V +R SV GL + + G+ VG++ + LD + +L A + P+
Sbjct: 278 RVRMRFDQSVRGLVVGAPIDAYGVTVGKVDAINLDFDETAKQFYALVSATLYPE------ 331
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
+ Q I R + R RA +
Sbjct: 332 ---RLGAQTFERIKDFAGPDTRHPSGVLMAALVARGTRAQLRIGNLLTGQLYVALAEFPN 388
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + + + + +S
Sbjct: 389 AKPVTFTMEDQPFIPTVPNNLDQLQQQLNSILTKVEKVPFDEIGTELAGALRGASKLVKR 448
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ L V +L N + ++ +R+ + Q
Sbjct: 449 LDGQLAPEAQAVLRQANRSLAAVGALLAPESDLPVNTDTALRELGRAARSLRQLSDYLQA 508
Query: 277 VGQKI 281
+
Sbjct: 509 HPDAL 513
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 29/102 (28%), Gaps = 10/102 (9%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
+ L V + + + + +GL + VR+ + VG
Sbjct: 3 WIWLVPVVAVIGGLALVLQA-----WLNAGPTATVHFQT-AEGLEAGKTQVRYKEVTVGL 56
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
+ + L+ + + + D L T + L
Sbjct: 57 VERVNLNADRTG-VVVTIRVDKDAATLLREGTVFWVVRPRLT 97
>gi|118470731|ref|YP_889048.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118172018|gb|ABK72914.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 158
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 34/106 (32%), Gaps = 5/106 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ GL ++ R Q+ G++ + V +GI
Sbjct: 12 SNLVKAGLIGTVLMILVVAVGLQPERLLQWAT-SVRHQALFTE-AGGIAVGNDVTLSGIK 69
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
VG + + L +L PL +TTA IRT L G
Sbjct: 70 VGSVTDIRLQ---NGDALVTFTTEGRYPLGSTTTAHIRTGSLLGER 112
>gi|120401942|ref|YP_951771.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954760|gb|ABM11765.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 495
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 21/137 (15%), Positives = 44/137 (32%), Gaps = 6/137 (4%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M ++ + +F V+ L ++ + G + + GL +V
Sbjct: 1 MRLTRRIKIQLLVFAVASLIAGLVMSIGYMGLPSLLFGIGRYQVAMELPTTGGLYKTGNV 60
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ G VGR+V + + A +R + A + ++ G Y+EL
Sbjct: 61 TYRGQEVGRVVDVRM---TDTGIEAVLSLRSQVRVPKDLDAQVHSRSAIGEQYVELIPRP 117
Query: 119 -KEKKTIFQIATERNQR 134
+ + R
Sbjct: 118 GGDMTPLRDGDVIPADR 134
>gi|315445482|ref|YP_004078361.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315263785|gb|ADU00527.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 343
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 18/97 (18%), Positives = 29/97 (29%), Gaps = 5/97 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
++++ + G S L SVR GI VG + G+ L
Sbjct: 16 LTMVLLTAGLFMIFGEYR--SGSANRYSAVFTDSSS-LRGGDSVRAAGIRVGTVRGVTLQ 72
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + + L T +R L G Y
Sbjct: 73 DDNT--VVVDFDADDNVRLTEGTRIAVRYLNLVGDRY 107
>gi|306797807|ref|ZP_07436109.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu006]
gi|308375735|ref|ZP_07444930.2| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu007]
gi|308341793|gb|EFP30644.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu006]
gi|308345279|gb|EFP34130.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu007]
Length = 407
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 30/333 (9%), Positives = 83/333 (24%), Gaps = 11/333 (3%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ R+ ++ + +G+ V G+PVG+IV +
Sbjct: 1 MLVAGVILAMRTADAAARTT--VVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEPQP---L 55
Query: 80 HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
+ + A I + L I+L+ T+ +R ++
Sbjct: 56 RAKISFWFDRKYRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQERTVVPV 115
Query: 140 TPSGINYFISNAENTSKKISDSSRHI-----QKIIENIEKPLTTTIANIETISTVLANNI 194
+ + + +N+ T I +S ++
Sbjct: 116 EWDDLRAQLQRLTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTIIKLSQAISALG 175
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
H + T + + + + + + ++ ++I + + +
Sbjct: 176 DHSKDIFSTVTNLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIGQAAEDLNAVVA 235
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADSTSNMRS 313
+ + + + D L + S NI + + +
Sbjct: 236 DVGSFAAEHREAIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEPANGALT 295
Query: 314 SISAIREITDQRQKIISTINTIENITSNLNDSS 346
A + + + I +
Sbjct: 296 GALAGNNMANPIAFLCGAIQAASRLGGEQAAKL 328
>gi|240172681|ref|ZP_04751340.1| MCE-family protein Mce2A [Mycobacterium kansasii ATCC 12478]
Length = 400
Score = 66.5 bits (159), Expect = 9e-09, Method: Composition-based stats.
Identities = 23/156 (14%), Positives = 58/156 (37%), Gaps = 9/156 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVR 59
++ Y +GL + +L +Y ++ P ++ + P GL + V
Sbjct: 4 RTRPPYKIIGLLGLMVLALVGTGLY--AQFRGAFIPKTKLTMLAPR--AGLVTDPGAKVT 59
Query: 60 FNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELST 116
+NG+ +GR+ + + ++ + + P + + I+ + G Y+ L++
Sbjct: 60 YNGVQIGRVASISEVTRDGVPAAKLVLDVDPKYIDSIPANVGGEIKATTVFGNKYVSLTS 119
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + + A+ T + + AE
Sbjct: 120 PKIADPQHINPSMVIDATAVTTEFNTLFQTLTAIAE 155
>gi|326404477|ref|YP_004284559.1| hypothetical protein ACMV_23300 [Acidiphilium multivorum AIU301]
gi|325051339|dbj|BAJ81677.1| hypothetical protein ACMV_23300 [Acidiphilium multivorum AIU301]
Length = 541
Score = 66.5 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/391 (7%), Positives = 98/391 (25%), Gaps = 23/391 (5%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ST + + + G+ +G + + L ++ + I T+
Sbjct: 170 ISTGAGIFYKGLRIGTVRKIALGPNGGGFAI-------GAFISRRYQRLITTRSRFWNA- 221
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ A+ R + + P+ ++ + + + +
Sbjct: 222 ----------GGVRVTASGGGPRLAMQSVPALVSGALGVTTPPGGRQAIDGARFRLYHSA 271
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + T + + + +
Sbjct: 272 AAARDAPGPHAVAYRTVLPGGPRGLAVGAPVTLEGATVGAVTGVAMAYAPRAGAIRSTVR 331
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
A+D ++ + ++ +R V + + L+
Sbjct: 332 FALDPSRIGLAGATWNLRHPRPQMNAMLARLIHRGLRAHLARATPVIGQQELALAIMRGA 391
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + A +S + + ++ A+
Sbjct: 392 APATLGKGAPPAVPAVAGGSIGRLMAEAGGILANLHAVSARLAALSRAPRTRAALKRLAQ 451
Query: 352 LMSKINNISALK--ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ + I+ + L D +R + + + I + G+ +
Sbjct: 452 TAANVAAITRTTRGQAPHLLADLRRTANEADEALRDLRGMIGAQGSAANAPESQTMP--- 508
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + +L + ++ +P ++ G+
Sbjct: 509 HTLYELGRAARALRELVDELNAHPNALILGK 539
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 4/91 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE- 76
+ + WL EV++ P + G+ + V + G VG +V + LD
Sbjct: 25 VAAALIVAWLG-VAALATRGPEVVVTFPIT-GGIRPGGTDVTYRGATVGHVVSVHLDASL 82
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ D L T I + ++
Sbjct: 83 AAMKVRLRFDPDMDGHLGRGTRYWIAGRHVS 113
Score = 41.1 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 3/97 (3%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL---AKALIRPDTPLYPST 97
+PG GL+ + V G VG + G+ + ++ + + P
Sbjct: 285 YRTVLPGGPRGLAVGAPVTLEGATVGAVTGVAMAYAPRAGAIRSTVRFALDPSRIGLAGA 344
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
T +R + R + + + Q+
Sbjct: 345 TWNLRHPRPQMNAMLARLIHRGLRAHLARATPVIGQQ 381
>gi|319950498|ref|ZP_08024411.1| Mce family protein [Dietzia cinnamea P4]
gi|319435857|gb|EFV91064.1| Mce family protein [Dietzia cinnamea P4]
Length = 414
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 50/135 (37%), Gaps = 5/135 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + V++ + ++ ++ + + +V + +P + G+ T+++V +
Sbjct: 1 MTKTLRNQLIAFCVIAAVGITYVGANYVRLPSLFGIGQYQVYLDLPET-GGVFTNAAVNY 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G +GR+ L L + + + P + T A + + G Y++L
Sbjct: 60 RGTAIGRVGELSLTDDG---VRVELDLDSSAPDIPADTEAVVANRSAIGEQYVDLRPNSN 116
Query: 120 EKKTIFQIATERNQR 134
+ T R
Sbjct: 117 SAPYLEDGDTVSAGR 131
>gi|254773615|ref|ZP_05215131.1| hypothetical protein MaviaA2_02920 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 336
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 34/97 (35%), Gaps = 7/97 (7%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+ + Y + P ++ G++ ++V +G+ VG++ + L
Sbjct: 2 VLVVCVVLIAFGY----AGLPFWPQGKIYDAYFTDAGGINPGNAVYVSGLKVGKVTDVGL 57
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + + + + A IRT + G
Sbjct: 58 AGDS---AKISFSVDRHVAVGDQSLAAIRTDTILGER 91
>gi|306808264|ref|ZP_07444932.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu007]
gi|306968087|ref|ZP_07480748.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu009]
gi|308345281|gb|EFP34132.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu007]
gi|308354212|gb|EFP43063.1| MCE-family protein mce3F [Mycobacterium tuberculosis SUMu009]
Length = 430
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 6/126 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSN--QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ +F V + + R + V + + GL +V + G V
Sbjct: 3 VQLAVFTVIAVGVLAITFLHFVRLPAMLFGVGRYTVTMELVE-AGGLYRTGNVTYRGFEV 61
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
GR+ + L A ++ + A + + G TY+EL +
Sbjct: 62 GRVAAVRL---TDTGVQAVLALKSGIDIPSDLKAEVHSHTAIGETYVELLPRNAASPPLK 118
Query: 126 QIATER 131
Sbjct: 119 NGDVIA 124
>gi|300789659|ref|YP_003769950.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299799173|gb|ADJ49548.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 307
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 34/94 (36%), Gaps = 5/94 (5%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY 77
+ +RS G GLS + VR G+ VGR+ + L +
Sbjct: 1 MLALGVLTALNARSLPVLGDGTTYSAEFTE-AAGLSEGNDVRVAGVEVGRVSDVRLRGD- 58
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
H L + L +T+A IR + + G Y
Sbjct: 59 --HVLVSFRAK-GAWLGDATSAAIRLKTVLGQKY 89
>gi|254422817|ref|ZP_05036535.1| mce related protein [Synechococcus sp. PCC 7335]
gi|196190306|gb|EDX85270.1| mce related protein [Synechococcus sp. PCC 7335]
Length = 490
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/405 (11%), Positives = 116/405 (28%), Gaps = 24/405 (5%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
WL N + P +I G+ + V + G+ VGR++ +
Sbjct: 28 WLRGFNPANRP-YRLIAEF-DDTMGVQIGTPVMYRGVSVGRVMSITPQSN---AVEVGLE 82
Query: 87 IR-PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
I + + GL G ++ A P
Sbjct: 83 ITAKELRIPNEVLVETVESGLIGE------------VSVEITPLAELSEAAEEVYPREQA 130
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
S ++ + + L A+ E + + + +
Sbjct: 131 CDSSVILCDGDRLEGEIGPSYEALLRSTTSLMELYADPEVLDNLKVVLENVSEATAQAGV 190
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+T ++ T I + QI ++ S+ + + +
Sbjct: 191 LTQEATQLTQTVGDELPSILEAARTATGAATGAALQIQGTVEQFSSTANDINSLIGDNRV 250
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ +T Q ++ + + ++S E LE + + + + I +
Sbjct: 251 VLVDTLGNLQATSLQLRNAVDTLGPTIQSGELIGNLEALLLNAAQASEDLGTITASLNTP 310
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK 385
+I I+ + D+ ++M+ ++ ++ + +D + T +++
Sbjct: 311 ANLIL----IQQTLESARDALSSAQKVMADVDELTGDPDLRRQVRDLINGLGTLVSSTDS 366
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ + I L+ + LN + T + + + E
Sbjct: 367 LAQQT-EIAELLEPL-GTSLNTVNLPPADRSFTEQSMNRPMADLE 409
>gi|150024846|ref|YP_001295672.1| hypothetical protein FP0753 [Flavobacterium psychrophilum JIP02/86]
gi|149771387|emb|CAL42856.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
Length = 316
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 47/129 (36%), Gaps = 6/129 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + V++ + + +L N ++ + +V+GL+T + +
Sbjct: 1 MKI-TREIKTAILVIASILLFIWGYSFLKGQNLFNSHKKLFVEY--DNVEGLATSAPITV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G +G++ + L L + I D P+ ++ A I G+ I + K
Sbjct: 58 SGKVIGKVNSITL--NTNGKLLVELQIDDDEFPISKTSIAQIYEPGVIAGKQIAIIPNYK 115
Query: 120 EKKTIFQIA 128
+
Sbjct: 116 DANITNDGD 124
>gi|134098925|ref|YP_001104586.1| virulence factor MCE-like protein [Saccharopolyspora erythraea NRRL
2338]
gi|291009381|ref|ZP_06567354.1| virulence factor MCE-like protein [Saccharopolyspora erythraea NRRL
2338]
gi|133911548|emb|CAM01661.1| mammalian cell entry [Saccharopolyspora erythraea NRRL 2338]
Length = 347
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 94/286 (32%), Gaps = 14/286 (4%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
VV+++ WL+ V +V G+ +S VR G+PVG + +
Sbjct: 20 VVALVPVLMAGAGWLALDVHGGKR---VTAHFTTAV-GIYPESDVRVLGVPVGTVESVEP 75
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + I L TA + T + Y++L+ + A
Sbjct: 76 MGDS---VRVEMSIDAGVDLPAEPTALVVTPSVVADRYVQLAPAYTGGPRLTDGAEIPVA 132
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
R ATP ++ S+ + + + + ++ + + T++
Sbjct: 133 RT---ATPVELDELFSSLNELTVALGPTGANADGAVDELLRQSARTLSGNGAPLGESIRR 189
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ----VS 249
+ + + + ++ ++ K + T L ++++L + +
Sbjct: 190 LGDLARTIDDSKGDLFTTVDKLSAFTAVLAANDEQAGHALDQLASISEVLAADRGDLGAA 249
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ V + D R +T + + LL++ + +
Sbjct: 250 LAELNEAVAAVQGFIRDNRGRVRTNVDKLAVVSGLLAEQKASLAEA 295
>gi|307821990|ref|ZP_07652222.1| Mammalian cell entry related domain protein [Methylobacter
tundripaludum SV96]
gi|307736556|gb|EFO07401.1| Mammalian cell entry related domain protein [Methylobacter
tundripaludum SV96]
Length = 526
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/402 (9%), Positives = 105/402 (26%), Gaps = 46/402 (11%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP--DTPLYPSTTAT 100
I ++ + + + F+GI VG ++ L + N I D + +T
Sbjct: 164 ILETNNLGSMKPGTPINFHGITVGEVLSHKLS-DEANAIRLTIFINKPYDQFVRKNTRFW 222
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
I + ++
Sbjct: 223 IDSGIDLSAGADGFKVRTGPLISLLSGGI------------------------------A 252
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ IENI+ + + + + +M+ +
Sbjct: 253 FRAAAEDTIENIQPEYSLFPLYDTYTLSTQVVYQNTLKYVMYFNGSVRGLTVGAPVQIRG 312
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + ++ I +++ + + ++ + DV
Sbjct: 313 IPIGKVTEINLELDKKTAEIHIPVTVELEPDRIKEINNDNNISDKDVMAQLIN------- 365
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
L + + + + + S ++ + NI
Sbjct: 366 -KGLRAQLQTGSLLTGQLLVDLDFHPKSKIVLSDNKSVYPEFPTTASSLDQFTHSANIIM 424
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ-- 398
+ +L ++ N K A + T + T + ++ + S L
Sbjct: 425 DKVAKLP-LEDLTAEANKTLQS--LQGTSKAAASMLVTAQGTLDTADKTMASAHQVLSIM 481
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +++ L+++L + + + E+NP ++ G+
Sbjct: 482 EPGSTTHYELEQLLQELTQAASSVKQLTDYLEQNPNSLIRGK 523
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN---HSLAKALIRPD 90
+ ++ GSV GL+ + V+ GIP+G++ + L+ + H + PD
Sbjct: 286 QNTLKYVMYFNGSVRGLTVGAPVQIRGIPIGKVTEINLELDKKTAEIHIPVTVELEPD 343
>gi|226939554|ref|YP_002794627.1| ABC transport system periplasmic substrate-binding protein
[Laribacter hongkongensis HLHK9]
gi|226714480|gb|ACO73618.1| possible ABC transport system periplasmic substrate-binding protein
[Laribacter hongkongensis HLHK9]
Length = 329
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/280 (10%), Positives = 88/280 (31%), Gaps = 16/280 (5%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD----------QE 76
+L + ++ P EV SV+GL S V+F G+ +G + + + +E
Sbjct: 26 FLLGARRWFQPSVEVETYFNESVNGLEVGSPVKFRGVQIGEVSEVTVSTWVYQLSTPLEE 85
Query: 77 YPNHSLAKALIR-PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
N+ + ++++R D + +T +R G+ + + + RN
Sbjct: 86 RHNYIIVRSVLRGRDMGISQTT---LREYLDRGLRFQTQLAGITGQLYLALDFVPRND-- 140
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
P + + + Q + ++++ +A V +
Sbjct: 141 WGAPLPVSWTPSYPYIPSAPSLTNRIIHNAQSFLASLDEANIQQLARDLNALIVRIDERV 200
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ +++ + + + L + + + +
Sbjct: 201 AALPPEDVRTTARNVAEASARIDRLLGELEHRQLPRNLGLLAERLRAATDDGRVRQLLAR 260
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ ++ V + +++ ++ L+ ++ +
Sbjct: 261 LDQLLADSDSLVYDNAGELRQILAELSRTLTQLTTLSATL 300
>gi|149918247|ref|ZP_01906739.1| Mammalian cell entry-related protein [Plesiocystis pacifica SIR-1]
gi|149821007|gb|EDM80414.1| Mammalian cell entry-related protein [Plesiocystis pacifica SIR-1]
Length = 469
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/394 (8%), Positives = 100/394 (25%), Gaps = 41/394 (10%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E + VG+FV++ S+ ++ S + +V GL+ SSV+
Sbjct: 8 EQRTN-LVVGVFVIAFGALLMVSLMLIAISEGVLTEKTSIRAHF-RTVSGLTKSSSVQLA 65
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G +G + + +PL + S +
Sbjct: 66 GKEIGVVEEVTFISPTYEC----------SPLTED------------LGRFNHSRTDDCE 103
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
++F A + E + + +R + + +
Sbjct: 104 PSLFCAAMPGQG--------GEGTGLCAELEEFNGDLDAYARCSEDASCSEGEICVNKQF 155
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + + + + + ++
Sbjct: 156 RSRYKRVPWSAGEGVCVPFLTEHRRVEVTMRIDADKLQYIRSDSRATVASNGVLGDQLIN 215
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + ++ + K+D L+ S TS
Sbjct: 216 LTVGASDIYIEPGGRIQATPSLMEELNTFKDQIGGIIDKVDTSLAGIS----GLFTSLNN 271
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
EN + S+ + + + + ++ + + + + +++ +
Sbjct: 272 ENTKQDLQGILSNTNELTRQVAEGEGLVGALFNSPEYKDDFGRTLESVRHSAGQLDQTLS 331
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
++A A+ ++ + + + +
Sbjct: 332 TVN-----REAGPALRNVSRAADSVTDILDDLED 360
>gi|317047593|ref|YP_004115241.1| mammalian cell entry related domain-containing protein [Pantoea sp.
At-9b]
gi|316949210|gb|ADU68685.1| Mammalian cell entry related domain protein [Pantoea sp. At-9b]
Length = 547
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/401 (8%), Positives = 98/401 (24%), Gaps = 25/401 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D + + + P T +R +G
Sbjct: 168 AGQLTPGDPVLFRGYQVGSVESSSFDTDKR---MMTYQLFISAPYDRLVTTNVRFWKDSG 224
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
I S+ + + + + + AE S ++
Sbjct: 225 IAVDMSSSGMRVEMGSLTTLFSGGVSFDVPDGWELGDVAQNKAEYHLFDDQRSIQNSLYT 284
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
T + + + + + + +
Sbjct: 285 NHIDFLMF----------FTDSIRGLQAGAPVEFRGIRLGTVAQAPYMVPGVNQALDNDY 334
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ I ++ + + + ++ + +D +
Sbjct: 335 RVPVLIRIEPDRFLSRLGGDFNLEQHLQDGKKRGLRATLKTGNLLSGALYIDLDFYDNVP 394
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + +K + + + IN + Q+
Sbjct: 395 AYQGPNKVAGIEVIPTVSGGLSQIQQKLLAALDKINNLPLNPMINEATGTLKESQKTLQQ 454
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ ++ +N I+A +L D Q+ + + + + N +
Sbjct: 455 LQKTLNNLNQITASPAMKTLPADMQQTLRELNRSMKGLQP------------GSPAYNKL 502
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+++L +T+ L +V+ + G K
Sbjct: 503 VGDMQQLDKTLRELQPVLKTLNSKSNALVFEAKPGQDPQPK 543
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/74 (20%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV-------GLFLDQEYPNHS 81
S N + ++ S+ GL + V F GI +G + G+ +
Sbjct: 277 SIQNSLYTNHIDFLMFFTDSIRGLQAGAPVEFRGIRLGTVAQAPYMVPGVNQALDNDYRV 336
Query: 82 LAKALIRPDTPLYP 95
I PD L
Sbjct: 337 PVLIRIEPDRFLSR 350
>gi|87300576|ref|ZP_01083418.1| possible ABC transporter [Synechococcus sp. WH 5701]
gi|87284447|gb|EAQ76399.1| possible ABC transporter [Synechococcus sp. WH 5701]
Length = 319
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/110 (20%), Positives = 38/110 (34%), Gaps = 6/110 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VG +++ + WL + + + GL+ S+V F
Sbjct: 1 MRRSVREAIVGFSLLAAVVGGSGFWIWLRGIS-LSQNNWILKVSF-QDAAGLADRSAVIF 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGI 109
G+ VG + + LA+ I P L T A ++T L G
Sbjct: 59 RGVQVGSVRKVQ---TTSAAVLAELEISDPTLQLARPTMAQVQTGSLLGG 105
>gi|194367790|ref|YP_002030400.1| Mammalian cell entry related domain-containing protein
[Stenotrophomonas maltophilia R551-3]
gi|194350594|gb|ACF53717.1| Mammalian cell entry related domain protein [Stenotrophomonas
maltophilia R551-3]
Length = 174
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ G E+ R V L + V+ G+ VG++ + LD +
Sbjct: 36 SWGGEGYELKARFSQ-VGQLRKQAPVKIGGVTVGQVAAIDLDPVKFESI-VTLRMDSKVK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|300870130|ref|YP_003785001.1| ABC transporter-like permease [Brachyspira pilosicoli 95/1000]
gi|300687829|gb|ADK30500.1| ABC transporter-related permease with MCE domain [Brachyspira
pilosicoli 95/1000]
Length = 260
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 44/134 (32%), Gaps = 9/134 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K +G+F + L +I + + + + L + V +
Sbjct: 1 MKNK---VKLGIFFIVTLVLLIGAITVFGKFKLKGNGYRIYVDYVF--IGDLLVNGKVSY 55
Query: 61 N--GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA-GITYIELSTL 117
GI +G I + ++ + L T TI+T GL G YI +
Sbjct: 56 RGGGINIGFIEDISINPDGTIRVTLFIT-DRKVILPEGTRFTIQTVGLGLGEKYIMATPP 114
Query: 118 RKEKKTIFQIATER 131
+ I E
Sbjct: 115 TITTSGLKSIEPET 128
>gi|331699194|ref|YP_004335433.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953883|gb|AEA27580.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
Length = 458
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 43/137 (31%), Gaps = 9/137 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S G+ ++++ ++ V + + L+T + V+
Sbjct: 1 MRS-TRRVLQGVAFIAVIALMVGLAV--AKYAGAFDSGVPVTLDVDHVGAQLNTRADVKV 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE-LSTL 117
G+ VGR+ + ++ I PD + +A + + L G Y+ +
Sbjct: 58 RGMVVGRVEDIT---TNGARAVVTMEIDPDKIDAIPADVSARLLPKTLFGEKYVSLVPPA 114
Query: 118 RKEKKTIFQIATERNQR 134
+ R
Sbjct: 115 TPAGGHLRAGDVIPEDR 131
>gi|311744827|ref|ZP_07718623.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311311944|gb|EFQ81865.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 393
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 43/133 (32%), Gaps = 6/133 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFS-FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M S+ + F+V L + + + + V + + S G+ + V
Sbjct: 1 MISRLTRMQLIAFLVITLVGASYVGGRYAQVDRFFVDRSFPVTVDLTDS-GGIFAGAEVT 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
+ GI VGR+ L A I P + A + + G YI+L
Sbjct: 60 YRGIAVGRVGELEF---TDAGVRATLEIEDSAPDIPSDLVAVVANKSAIGEQYIDLQPRD 116
Query: 119 KEKKTIFQIATER 131
E+ +
Sbjct: 117 NEEPYLAAGDNIG 129
>gi|121635312|ref|YP_975557.1| hypothetical protein NMC1589 [Neisseria meningitidis FAM18]
gi|120867018|emb|CAM10781.1| hypothetical integral membrane protein [Neisseria meningitidis
FAM18]
Length = 546
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/388 (8%), Positives = 98/388 (25%), Gaps = 32/388 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + + +
Sbjct: 297 FFKQSVRGLTVG-------------------SPVEYKGLNVGVVSDVPYFDRNDSLHLFE 337
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ + + + Q T + T ++
Sbjct: 338 NGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQ 397
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
S + D+ + ++ ++ S LN S +
Sbjct: 398 PSSSPKLRPHTVYADDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLNASLAELK 457
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ IN +S + ++ + + + R T + ++ D+QN
Sbjct: 458 STLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 505
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 506 TLQSLDKTLKDVQPVINTLKEKPNALIF 533
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 24/261 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + + +
Sbjct: 391 MIELNDQPSSSPKLRPHTVYADDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T +I L + +L + + L + V NT+ +
Sbjct: 451 ASLAELKSTLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQSL 510
Query: 268 RETTQTFQEVGQKIDHLLSDF 288
+T + Q V + +
Sbjct: 511 DKTLKDVQPVINTLKEKPNAL 531
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/458 (10%), Positives = 119/458 (25%), Gaps = 37/458 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYADDTVIATQGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + ++ + + +L+ T+ + NN
Sbjct: 432 DLLDKFGKLPLDKTVSGLNASLAELKSTLKSINTLSNN 469
>gi|226365587|ref|YP_002783370.1| Mce family protein [Rhodococcus opacus B4]
gi|226244077|dbj|BAH54425.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 363
Score = 66.1 bits (158), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/315 (10%), Positives = 90/315 (28%), Gaps = 11/315 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V+ V+G+ + V G+PVG + + + I D L
Sbjct: 30 IFRTSSTVVHSEFAYVNGVFPGTEVTVLGVPVGTVESVEP---RGATVMVTMSIASDVVL 86
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
A + G ++EL + T +R+ T + +
Sbjct: 87 PADAHAYVLVSSAIGERFVELGPAYTGGPVLESGQTIPPERSHSPITWDQLMDSVDTVVK 146
Query: 154 TS--------KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
T IS ++ + + + T I+ A+ + +D +
Sbjct: 147 TLGPDGGDAGAAISAAAASTDGLGPAMNDAIRTLSQASSVIAGNSADVGALVDNLAILVD 206
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
++ I + V+Q+ + + + +
Sbjct: 207 TISARQAQVDSLAGSLTAIGDEFAGQQFAIGDTVSQLSALLNQIDHLVSARGGDIAAGID 266
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
D+ ++ Q + ++ + + + + + A N+ ++++ +
Sbjct: 267 DLAGVSEVLQRHDTDLAEIMDLVPLLIDNIQRAVTPDQRARIRLNISTNLAQAEPTSPLC 326
Query: 326 QKIISTINTIENITS 340
+ + IT+
Sbjct: 327 AVVDPILCRGAGITN 341
>gi|315442441|ref|YP_004075320.1| ABC-type transporter involved in resistance to organic solvents,
periplasmic component [Mycobacterium sp. Spyr1]
gi|315260744|gb|ADT97485.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Mycobacterium sp.
Spyr1]
Length = 416
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 46/133 (34%), Gaps = 6/133 (4%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + +++GL V L + + + + + I +P S GL + V
Sbjct: 18 RRRAWLSALGL--VMTLVVATAYLLFGALRVNPFASSYRMTIELPESA-GLLPEQDVTLR 74
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+P+GR+ L + N + + S+ + AG YI+
Sbjct: 75 GVPIGRVERLDITPAGVNAV---VNVEAAAQIPESSDVRVSGLSPAGEQYIDFVPASDVG 131
Query: 122 KTIFQIATERNQR 134
+ A R R
Sbjct: 132 PFLADGAVVRQGR 144
>gi|71281474|ref|YP_269775.1| putative paraquat-inducible protein B [Colwellia psychrerythraea
34H]
gi|71147214|gb|AAZ27687.1| putative paraquat-inducible protein B [Colwellia psychrerythraea
34H]
Length = 580
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/282 (10%), Positives = 85/282 (30%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
E I+ + ++ GLS + V + G+ +G + + L + + P+
Sbjct: 299 KYSVEYIVLVSNTIRGLSVGAPVEYRGVLIGHVKSINLLAQRNSDRPQIFDEDIKIPILI 358
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
S + + + A+ + + + ++
Sbjct: 359 SLQPGRVGLPDNEMGVSLMKQQHQLWIKDGLRASLKTGSLLTGSLFIDFQHYSDLNNEEE 418
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ Q I + + I ++ +N++ + + ++
Sbjct: 419 NTQRTDFENSQYGEYTIIPSVDDEFSQITAKASQFIDNLNALPLEKISGNTNELITEFTQ 478
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
T + + +L ++ ++ Q++ Q L+ S K D+R+T
Sbjct: 479 TAKSFQSVSDNLSGVLDGVNQQQLTQELKTTLQSYTKLSKDLSAGSKGYEDLRQTLSALT 538
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISA 317
+V ++ LL+ + + + + + +
Sbjct: 539 KVMNELQPLLNQLKHQPNGLIFESGKVDAIEPKKYTPNKKAE 580
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 38/405 (9%), Positives = 110/405 (27%), Gaps = 26/405 (6%)
Query: 53 STDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQ-----GL 106
S + + G+ VG+ + + +E + A + +T +
Sbjct: 187 SKGDPIIYKGLTVGQFEHIHFNFEERVVYYNAFIKAPYHQLVTTNTKFWDVSGLRMDLTA 246
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
G++ + + + + S + + + E ++ S +I
Sbjct: 247 DGLSIQTGNIETMLTNGVTFDVPKGMENGEEITERSYFDIYANYKEADDERYKYSVEYIV 306
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ I + +I+ + + ++
Sbjct: 307 LVSNTIRGLSVGAPVEYRGVLIGHVKSINLLAQRNSDRPQIFDEDIKIPILISLQPGRVG 366
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
L + L K L + S + D + +
Sbjct: 367 LPDNEMGVSLMKQQHQLWIKDGLRASLKTGSLLTGSLFIDFQH-YSDLNNEEENTQRTDF 425
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ S + + + + T+ I + + + + ++
Sbjct: 426 ENSQYGEYTIIPSVDDEFSQITAKASQFIDNLNA-----LPLEKISGNTNELITEFTQTA 480
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ F + ++ + L ++ + + ++ S+ ++ G
Sbjct: 481 KSFQSVSDNLSGVLDGVNQQQLTQELKTTLQSYTKLSKDLSA------------GSKGYE 528
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
D++ + L + +N LN + P +++ E G V +PK
Sbjct: 529 DLRQTLSALTKVMNELQPLLNQLKHQPNGLIF--ESGKVDAIEPK 571
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 45/454 (9%), Positives = 121/454 (26%), Gaps = 25/454 (5%)
Query: 13 FV-VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
FV L + IY+ Q + I S +G+ + ++ + +G +
Sbjct: 32 FVPFVALLIGAWMIYY-----QLSNEGPVITIAF-DSAEGMEIGKTKIKSYNVDIGEVSN 85
Query: 71 LFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRT-----------QGLAGITYIELSTLR 118
+ L++ A+ + L ++ + + L YIE
Sbjct: 86 IVLNENADGVIVTARMTKNAEKLLNKNSDFWLVSPEISHTGISGLSTLISGVYIEFYPSS 145
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
++ + ++ +E TP G + + I + +
Sbjct: 146 IHEEEVDELTSEFIALKDPPVTPPGAPGLHLTLNSNDQFAYSKGDPIIYKGLTVGQFEHI 205
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
E + A + +++ T S + I + + +
Sbjct: 206 HFNFEERVVYYNAFIKAPYHQLVTTNTKFWDVSGLRMDLTADGLSIQTGNIETMLTNGVT 265
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ D N E + E + + + S +
Sbjct: 266 FDVPKGMENGEEITERSYFDIYANYKEADDERYKYSVEYIVLVSNTIRGLSVGAPVEYRG 325
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-- 356
+ ++ + + + + + I + N+ + ++
Sbjct: 326 VLIGHVKSINLLAQRNSDRPQIFDEDIKIPILISLQPGRVGLPDNEMGVSLMKQQHQLWI 385
Query: 357 -NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+ + A + SL F+ S+ N + + +N I ++ +
Sbjct: 386 KDGLRASLKTGSLL--TGSLFIDFQHYSDLNNEEENTQRTDFENSQYGEYTIIPSVDDEF 443
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ ++N P + + G + +
Sbjct: 444 SQITAKASQFIDNLNALPLEKISGNTNELITEFT 477
>gi|119356496|ref|YP_911140.1| hypothetical protein Cpha266_0661 [Chlorobium phaeobacteroides DSM
266]
gi|119353845|gb|ABL64716.1| Mammalian cell entry related domain protein [Chlorobium
phaeobacteroides DSM 266]
Length = 292
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 1 MES----KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M + K G+F + + F+ + + +++ + + I I ++ GL+ ++
Sbjct: 1 MRNPNALKWSDLKTGIFFILGIGFAAYLGLVIGKNSSLFTGVTTIKI-ISNNMQGLAENN 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
V +G +G + L + +A+ +R + + ATI+ G+ G Y++
Sbjct: 60 FVSVSGKKIGTVSKLDFVTSKDSLFVVAELRLRNEFAPLVSRDAKATIKALGILGDKYVD 119
Query: 114 LSTLRKE 120
++T +
Sbjct: 120 ITTGKGP 126
>gi|306806405|ref|ZP_07443073.1| MCE-family protein mce2b [Mycobacterium tuberculosis SUMu007]
gi|308347058|gb|EFP35909.1| MCE-family protein mce2b [Mycobacterium tuberculosis SUMu007]
Length = 252
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+++ + V GL VR G+ VG++ + L + L + L +TTA+
Sbjct: 15 LVLSVFTHVSGLRAGQFVRAAGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTAS 73
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
IR L G Y+EL ++
Sbjct: 74 IRYLNLIGDRYLELGRGHSGQRLAPGATIPLEHTHP 109
>gi|226364210|ref|YP_002781992.1| Mce family protein [Rhodococcus opacus B4]
gi|226242699|dbj|BAH53047.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 430
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/358 (10%), Positives = 87/358 (24%), Gaps = 8/358 (2%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ P + GL + VR G+ VG I + + + + + A
Sbjct: 43 TITAYFPTT-TGLYSGDDVRVLGVKVGTIDSIEPGAD---FARVTMNVNKSVEIPADAKA 98
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
I L +++L+ + T+ A+ +R + I ++
Sbjct: 99 VIVAPSLVSGRFVQLTPVYSGGPTMGDGASIPVERTAVPVEWDEIKTELNKLSEALGP-- 156
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + I+ N E++ L + + + + TF
Sbjct: 157 QGADPQGSLGTFIDTAANNLDGNGESLRNTLRELSETMRTLSDGRTDLFSTIRNLQTFVA 216
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ N + N + + V E E
Sbjct: 217 ALSSSNEQIVQFEGRLASVSNMLATNSDELGTALNDLDLALGDVNRFVVENRAALSEQVG 276
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ K + L + +N + + + N + +
Sbjct: 277 RLADATQVL--ADKRPQIEQVLHVAPTALANFSNIYKPAQGSLVGAVAFANLGNPVNFMC 334
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ A + + NSL + + I +L
Sbjct: 335 GAIQSLQANEANRSADLCTQYLSPVLNSLTMNYLPILSNPTTGVNAFPDQIEFTPPSL 392
>gi|313206480|ref|YP_004045657.1| mammalian cell entry related domain protein [Riemerella
anatipestifer DSM 15868]
gi|312445796|gb|ADQ82151.1| Mammalian cell entry related domain protein [Riemerella
anatipestifer DSM 15868]
gi|315023579|gb|EFT36583.1| Mce4 protein [Riemerella anatipestifer RA-YM]
gi|325336074|gb|ADZ12348.1| hypothetical protein RIA_1245 [Riemerella anatipestifer RA-GD]
Length = 312
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 90/296 (30%), Gaps = 7/296 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ GL + + ++ N + + +V GLS ++V NG+
Sbjct: 4 SKELKAGLIAILAIVGFVLLYQFMKGRNIFSMDNVYYVKY--DNVQGLSASNAVSINGLK 61
Query: 65 VGRIVGLFLDQEYPNHS--LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG++ + + H + K + +T I GL ++++ + ++
Sbjct: 62 VGQVEEIKPVKAANGHIYFVVKITVDNKFGFAKKSTVEIFEPGLMSGKEVKINLIYDGEQ 121
Query: 123 TIFQIATERN-QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
Q+++ + S + + + + KI++ + +
Sbjct: 122 AKNGDTLMGALQQSVFNSLSSEVKPVKDQLSHVLTNLDSTLASTNKIMDEQNRREIKQLL 181
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ S M + N T+LDK + +N+
Sbjct: 182 QSLNHTVESFRQTSLQTNQMLSNTDPKIQKMLDNANLATVSAKTTLDKYGNVAEKLDINK 241
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRET--TQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + S K + + + +++ ++ + + ++
Sbjct: 242 LNDAVAKLSLTSDKLNTLISGIQNGEGSLGKIAKDEQLYNNLNQTSKNLNGLIEDI 297
>gi|326383828|ref|ZP_08205513.1| Mce family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326197592|gb|EGD54781.1| Mce family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 409
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/145 (13%), Positives = 43/145 (29%), Gaps = 5/145 (3%)
Query: 1 MESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M + LF+V I +++ + + + + GLS+ + V
Sbjct: 1 MRDRFPAGTFQFVLFIVVAAVVIPLGINYIAGPAGFGSKL-RLHASM-QDAFGLSSGTGV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VG + L + + +R D + + + +AGI +++ T
Sbjct: 59 TLRGVNVGTVTSSTLAP-GAESADVELSLRGDVQIPKDSYLQVTMGSMAGIQTVDIITTA 117
Query: 119 KEKKTIFQIATERNQRAMITATPSG 143
+
Sbjct: 118 SGGPYLGDGDQIAAPPDKQPMQMDA 142
>gi|325922507|ref|ZP_08184270.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas gardneri
ATCC 19865]
gi|325924179|ref|ZP_08185739.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas gardneri
ATCC 19865]
gi|325545310|gb|EGD16604.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas gardneri
ATCC 19865]
gi|325547015|gb|EGD18106.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas gardneri
ATCC 19865]
Length = 183
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 36 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVSDISLDPTKFDSV-VTLSLDTKYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|308377471|ref|ZP_07668518.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu009]
gi|308355635|gb|EFP44486.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu009]
Length = 264
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 36/96 (37%), Gaps = 1/96 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+++ + V GL VR G+ VG++ + L + L + L +TTA+
Sbjct: 27 LVLSVFTHVSGLRAGQFVRAAGVEVGKVAKVTLI-DGDKQVLVDFTVDRSLSLDQATTAS 85
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
IR L G Y+EL ++
Sbjct: 86 IRYLNLIGDRYLELGRGHSGQRLAPGATIPLEHTHP 121
>gi|120405101|ref|YP_954930.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957919|gb|ABM14924.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 507
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/268 (11%), Positives = 71/268 (26%), Gaps = 7/268 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
Q + P + VR +G+ VG I + + + + D
Sbjct: 28 VRQVFFGPKTITAYFPT-ATAIYPGDEVRVSGVKVGTIDKIEPEG---TLTRMTLKVDRD 83
Query: 91 TPLYPSTTATIRTQGLAGITY---IELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P+ A I Q L Y ++ A+
Sbjct: 84 VPVPADAKAVIVAQNLVAARYVQLTPSYREGGGPTMGDGGTIPESRTAVPVEWDEVKTQL 143
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ +E + S I + +++ + + L+ +
Sbjct: 144 MRLSEELGPQADVSGTSISRFVDSAANAMEGNGEKLRETLRQLSGVARIFAEGSGNIVDI 203
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + L + A VN ++ + + + ++V V
Sbjct: 204 IKNLQVFVSALRDSKDQIVLFQNRLATLTSVVNDSRSDLDAALTDLSFAINEVQRFVAGS 263
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSK 295
R+ T ++ +L D +++
Sbjct: 264 RDQTAEQIRSLGQVTQVLVDNRLALENV 291
>gi|118462958|ref|YP_884169.1| Mce family protein [Mycobacterium avium 104]
gi|118164245|gb|ABK65142.1| putative Mce family protein [Mycobacterium avium 104]
Length = 323
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/301 (7%), Positives = 74/301 (24%), Gaps = 28/301 (9%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ ++ + ++S + ++ + VR GI VGR+ L
Sbjct: 17 ALAIIVVLALTAAAVYVSPPGEKS------VVFFTDDAASVRPGEDVRIAGITVGRVKDL 70
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY------------------IE 113
++ +A + + + +R + G Y
Sbjct: 71 SIEPN---QVKVRASVDSSAFVGDQSQIQVRMLTVVGGYYVNLVSLGNKPLGNRAIPLER 127
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
++ + + S +S + I+
Sbjct: 128 VTMPYNLMRALTDATKITEGVDPKPIRQSLDRIQAGLNGTNVDTLSAVIDAGNALTSTID 187
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH-SSDSKNTFNTITDLITSLDKMIK 232
+ + + ++ +++ ++ + +
Sbjct: 188 RQRGQITTILNLSDEYIDQLSNYRERLQELVSKLSILEQTLVLYGKGFAGALSGMGDIGD 247
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
A + + + + D+ +D + + KI+ +L +++
Sbjct: 248 AFLEPFGKFWVNHREEFIEKVREWQDRFRRWANDNSRIIPRLRRIRDKIERVLDAQNARP 307
Query: 293 K 293
+
Sbjct: 308 E 308
>gi|318042087|ref|ZP_07974043.1| hypothetical protein SCB01_10275 [Synechococcus sp. CB0101]
Length = 264
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 1/100 (1%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
LF+ S L + + ++R Q+ + + I + GL VR +GIPVG + L
Sbjct: 15 LFLGSGLVLAVALVVGMAREQQWGTRWLPLHL-ISSNAIGLRPGQEVRISGIPVGTVQTL 73
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L + R + P + A++ +GL G +
Sbjct: 74 ELQANGQVKVSLRVQERHADLIGPKSVASLGQEGLVGDHF 113
>gi|300703845|ref|YP_003745447.1| paraquat-inducible protein b (pqib) [Ralstonia solanacearum
CFBP2957]
gi|299071508|emb|CBJ42832.1| putative paraquat-inducible protein B (pqiB) [Ralstonia
solanacearum CFBP2957]
Length = 517
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/412 (10%), Positives = 98/412 (23%), Gaps = 44/412 (10%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + R GS++ S V + + VG++ L + + + P +
Sbjct: 147 GARYRLHARSLGSIE---VGSPVYYGHLDVGQVTATDLAPDGKG---VSIEVFVEAPYHR 200
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+A R G + + PS
Sbjct: 201 YVSAQTRWWNAGGGSSSRDAQGFPSGMQPLTAMLLGGLAFQSPPGPS------------- 247
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
T + + + +M Q S
Sbjct: 248 -------------RNQAAPAGTAFELAEDGPAVPEPPAGAPAVVVMRFAQSLRGLSVGAV 294
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
I+ ++ +L + + + + +
Sbjct: 295 VDFRGLAFGEVTKIGIEHAVGKREPAMLVTMNLYPDRLGQPFRDSAEHADAAAGKALLRK 354
Query: 276 EVGQKIDHLLSDFSSKMKSKETS-AFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
V + L + + N + ++ S + + + + + I
Sbjct: 355 LVADGLRGQLRTGNLLTNQLYVALDLFPNTPPARLDLNRSPVELPTVPNTLDDLQAAIGE 414
Query: 335 IENITSNL--NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
I + + + + L + L A+ + T + ++ +
Sbjct: 415 IMRTLDRAPLGPVGTELSRSFVQARRLFKLLDTQ-LAPRARETLATAKQGFDEAEAALNP 473
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
S S D+Q +L + E+ P+ IVWG+ S
Sbjct: 474 --------SPSLQTDLQPTQERLARAQQTLETLAKAIEQRPETIVWGKTPVS 517
Score = 44.5 bits (102), Expect = 0.036, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 31/101 (30%), Gaps = 13/101 (12%)
Query: 8 TSVGLF---VVSILFFSFFSI--YWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
T VG +V +L W + E+ I +GL + + VRF
Sbjct: 2 TKVGAAYLWLVPVLAVLIGMARLLWFAYDG-----GPEITISFLD-AEGLESGRTPVRFK 55
Query: 62 GIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATI 101
+ VG + + ++ + + T I
Sbjct: 56 DVEVGTVTAVHPSHDHKRVLASVRLTKAAANVAVKDTRFWI 96
>gi|254819664|ref|ZP_05224665.1| hypothetical protein MintA_07064 [Mycobacterium intracellulare ATCC
13950]
Length = 419
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/125 (16%), Positives = 42/125 (33%), Gaps = 5/125 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ SV V+ ++ + + + R + V +++P S GL + V G+ +G
Sbjct: 25 WLSVAGLVLILVVATAYLLVGALRVKPF-TSSYRVTVQLPES-GGLLPNQDVALRGVRIG 82
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
R+ L + + N I + + + AG YI +
Sbjct: 83 RVESLQITDDGVNAVA---SITSKVRIPANAVVHVSALSPAGEQYINFEAASDAGPYLHD 139
Query: 127 IATER 131
+
Sbjct: 140 GSRIA 144
>gi|71899307|ref|ZP_00681468.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Ann-1]
gi|71730933|gb|EAO33003.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Ann-1]
Length = 178
Score = 65.7 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-L 93
G + + L + VR +G+ +G++ + LD + + L
Sbjct: 36 GGNQYTLTAHFTQ-IGQLRKQAPVRISGVNIGQVSNITLDPKTFESV-VTLSLDKQYKDL 93
Query: 94 YPSTTATIRTQGLAGITYIELSTL 117
T+A I T GL G +YI L
Sbjct: 94 PADTSANILTSGLLGESYINLLPG 117
>gi|296127613|ref|YP_003634865.1| hypothetical protein Bmur_2597 [Brachyspira murdochii DSM 12563]
gi|296019429|gb|ADG72666.1| Mammalian cell entry related domain protein [Brachyspira murdochii
DSM 12563]
Length = 259
Score = 65.7 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 46/131 (35%), Gaps = 9/131 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K +G+F + L +I L + + I + L + V +
Sbjct: 1 MKNK---VKLGIFFIVTLVLFVGAIILLGKIKLKGDGYRLYVDYIF--IGDLQENGKVSY 55
Query: 61 N--GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA-GITYIELSTL 117
GI +G I + ++ + + T +I+T GL G YI +S
Sbjct: 56 RGGGIQIGFIEKISINPDGTIRVTLFIT-DKTVVIPEGTKFSIQTVGLGLGEKYIMVSPP 114
Query: 118 RKEKKTIFQIA 128
+ IA
Sbjct: 115 ATTTTGMTSIA 125
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 34/103 (33%), Gaps = 7/103 (6%)
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
N + S L IN IS + N + +A+ D+ IN + + +
Sbjct: 153 NFQEFSSVITNLAQTINMISDIIGTNEV--TITKAISNVNDSLANINNITRDLSYIISDV 210
Query: 401 -----SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ + L + E +N+ NP +++
Sbjct: 211 ESGKGTAGAVMKDPTLQTNINEIINNMRIFSEKLRDNPSTLLF 253
>gi|218885148|ref|YP_002434469.1| hypothetical protein DvMF_0040 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756102|gb|ACL07001.1| Mammalian cell entry related domain protein [Desulfovibrio vulgaris
str. 'Miyazaki F']
Length = 327
Score = 65.7 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/128 (17%), Positives = 44/128 (34%), Gaps = 4/128 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +G FVV L ++ S ++ ++++ GSV GL+ + V F
Sbjct: 1 MARAANKAMLGAFVVGALALLAAAVLLFG-SGRFMKDRPQLVLYFKGSVRGLNIGAPVVF 59
Query: 61 NGIPVGRIVGLFLDQEYPN---HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
G+P+G + + L P+ L + QG + +
Sbjct: 60 RGVPIGSVSEIRLLHNTDTLEFFIPVFIAFEPERILNMKDGGVVERQGDYRVLQQLIDKG 119
Query: 118 RKEKKTIF 125
+ + +
Sbjct: 120 LRARLALQ 127
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 15/168 (8%), Positives = 65/168 (38%), Gaps = 19/168 (11%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + +++ ++ + + S ++ D+ ++R ++++
Sbjct: 175 PIENIMAQLNEAVAGLNRIVNSPVVEDTASSLNDTLKDVRQLVASVNGQVGP-------- 226
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ +L ++Q++ L K++ ++ + + + S + + +
Sbjct: 227 -----VGQSLAGAAQRYGALAEKLD-----RQLPDALAQTTQTLKSLAAASTRAEAALAA 276
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +++ S+ + ++Q +R++ ER+P+ ++ G+
Sbjct: 277 AHSTIRDDSR-TMTEVQQALREMGAAARSLRTLAEYLERHPEALLRGK 323
>gi|118466088|ref|YP_881583.1| mce related protein [Mycobacterium avium 104]
gi|254775052|ref|ZP_05216568.1| mce related protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|118167375|gb|ABK68272.1| mce related protein [Mycobacterium avium 104]
Length = 419
Score = 65.7 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 5/128 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ SV V+ ++ + + + R + V +++P S GL + V G+ +G
Sbjct: 25 WLSVAGLVLILVVATAYLLIGALRVTPFAS-SYRVTVQLPES-GGLLPNQDVALRGVRIG 82
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
RI L + N A I + +T A + AG +I +
Sbjct: 83 RIESLQITDNGVNAVAA---ITSKVRIPANTVAHVSALSPAGEQFINFEAASDAGPYLHD 139
Query: 127 IATERNQR 134
+ ++R
Sbjct: 140 GSFITSER 147
>gi|296163930|ref|ZP_06846566.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900711|gb|EFG80081.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 521
Score = 65.7 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/272 (12%), Positives = 74/272 (27%), Gaps = 8/272 (2%)
Query: 1 MES--KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M + +G + + + GL+ V
Sbjct: 1 MRTLQAINPYRMGAMGIIVAAVVTGVGQSFTSIPMLFAQATYY--GEFKDTGGLNKGDKV 58
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
R G+ VG + G ++ H + K I +T + + IRT + G +E+
Sbjct: 59 RIAGVNVGEVQGFTINGN---HVVMKFSIGSNT-IGSKSRLAIRTDTILGKKVLEIDPQG 114
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + + + S + + +E L+
Sbjct: 115 SRVLQPNATLPLGQTTSPYQIYDAFFDVTKAATGWDINTVKRSLNVLSQTVEQTYPHLSA 174
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + S L I +++ + ++ + T +
Sbjct: 175 ALDGVAKFSDTLGKRDEQIQRLLADARKVASILGDRSKQIDRILVNTQIVLAAFNERKSA 234
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
++ +L NI S D N + V +
Sbjct: 235 IDGLLGNIAAVSAQLKGLIDDNPNLHNVVEQL 266
>gi|190576454|ref|YP_001974299.1| putative transmembrane mce-like protein [Stenotrophomonas
maltophilia K279a]
gi|190014376|emb|CAQ48024.1| putative transmembrane mce related protein [Stenotrophomonas
maltophilia K279a]
Length = 174
Score = 65.7 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ E+ R V L + V+ G+ VG++ + LD +
Sbjct: 36 SWGSQGYELKARFSQ-VGQLRKQAPVKIGGVTVGQVASIDLDPVKFESI-VTLRMDSKVK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|326330424|ref|ZP_08196732.1| LigA [Nocardioidaceae bacterium Broad-1]
gi|325951699|gb|EGD43731.1| LigA [Nocardioidaceae bacterium Broad-1]
Length = 417
Score = 65.7 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/352 (9%), Positives = 101/352 (28%), Gaps = 22/352 (6%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS--VRFNGIPV 65
T++ + +V + + +L + + V V GL+ + V G+ V
Sbjct: 25 TALAVLMVLGVVAAAIIKSYLGGTTPW-SDSTLVKAEFAE-VPGLNPSAQTSVTMAGVRV 82
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G++ ++ + + +Y A +R +E++ +
Sbjct: 83 GKVT--TAKASDDGSAVVTMKLEGEYDVYRDARAVLRPNNPLNEMQVEINPGSPSAGRLQ 140
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSR-HIQKIIENIEKPLTTTIANIE 184
P A+ + + + S+ + ++ + L N+
Sbjct: 141 DGEAI----------PVSQTARPVQADEILEHLDERSQLALTDLLVESDVALARAPQNLP 190
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + + + + + + + + + L
Sbjct: 191 QGLGATNDTLQAVQPVAEALRTRREKIAALVSALSDISVAVGRNDERIGRLADATQATLA 250
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ S S ++ D+R + Q + ++D L + S + ++
Sbjct: 251 VLADSDQALRASLKELPGLTGDLRAALNSTQALTDELDPTLDNLRSASDTLP-----GSL 305
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
S + + + K + + + +++ S ++ S +
Sbjct: 306 KRFRSTVGNLGKTLDAAKPVLDKARPVVADLRPLVADVTTSLHDIEKITSPL 357
>gi|296165087|ref|ZP_06847640.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899580|gb|EFG79033.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 605
Score = 65.7 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/286 (10%), Positives = 81/286 (28%), Gaps = 6/286 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VGL +++L + + L+ VR +G
Sbjct: 5 TEFNRNRVGLMGITVLVLVVAVGQSFTSIPMMFASPSYY--GQFTDTGQLNKGDKVRISG 62
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG++ +D + H L K I +T + + I+T + G +E+ +
Sbjct: 63 VNVGKVEAFDIDGD---HVLIKFNIGANT-IGSESRLAIKTDTILGKKVLEIDPRGSQTL 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + + + + S + + ++ L+ +
Sbjct: 119 RPGAVLPLGQSTTPYQLYDANFDITKAATGWNIDTVKQSLNVLSQTVDQTYPHLSAALDG 178
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ S + + ++ ++ + T + + +
Sbjct: 179 LTRFSDTIGKRDEQVKHLLAQAHQVASVLGDRSEQINRLLVNTKTLLAAFNERSRAIGAL 238
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
L+NI S + N + + + + D L
Sbjct: 239 LQNISAFSAEVQGFINDNPNLNPVLEQLRAISDVLVARKDDLAQTL 284
>gi|226304166|ref|YP_002764124.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183281|dbj|BAH31385.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 394
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++I+ ++ SR +V +P S L SSV++ G+ VG + +
Sbjct: 16 LLAIVLLIVAYVFLFSRGTDTFSSTPQVSAVVPASAGALRVGSSVQYRGVVVGSVADIEP 75
Query: 74 DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
S I + ++ + + + G +
Sbjct: 76 ---GTTASTISLAIDEGAFEDIPSTSQVRLMPRNIFGDFF 112
>gi|268590127|ref|ZP_06124348.1| paraquat-inducible protein B [Providencia rettgeri DSM 1131]
gi|291314396|gb|EFE54849.1| paraquat-inducible protein B [Providencia rettgeri DSM 1131]
Length = 549
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 45/411 (10%), Positives = 105/411 (25%), Gaps = 29/411 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ + L+ V F G VG + D + +
Sbjct: 163 VVLVSDKAGQLNPGDPVLFRGYRVGSVETSDFDMDKR---------------------DM 201
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
R Q Y +L + IA + + + + S
Sbjct: 202 RYQLFINAPYDKLISSNVRFWKDSGIAFDMSSQGVHVEMGSIATLLTGGVSFDVPTGWVP 261
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
++++ E ++I N +
Sbjct: 262 GANVKENTEFQLFDNQSSIQNSLYTQYQDFVLFFSDSVRGLQPGAPVEFRGIRLGTVAQV 321
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
T D + I + S + K+ + +++ + + G +
Sbjct: 322 PFYTEGLDQSLDNDFRIPVLIHIEPERFSKDVGKNFNLKNELNLALKDGLRASLKSGNLL 381
Query: 282 D-HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
L D ++ S+ A + IE + +
Sbjct: 382 TGALFVDLDFVQNAEPYKGPTVVAGYKIIPTTSAGLAQIQQKVIAVLDKINNMPIEPMLN 441
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + +++ + N + A K+ Q H + T +++NR +
Sbjct: 442 QTTQTLAEGQKVVKEANAMLAQLNKVMASKEFQNLPHDLQKTLQEMNRAMQGFQP----- 496
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + + +++L + + L +V+ E K +PK
Sbjct: 497 GSPAYNKMVDNMQRLDQVLREVQPLLRTLNNKSNALVF--EAEPTKDVEPK 545
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 73/276 (26%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + V F GI +G + + E + +
Sbjct: 279 SIQNSLYTQYQDFVLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYTEGLDQ-----SLD 333
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + + + + K +A + RA + +
Sbjct: 334 NDFRIP-------VLIHIEPERFSKDVGKNFNLKNELNLALKDGLRASLKSGNLLTGALF 386
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + +Q + I T S LA + ++ P
Sbjct: 387 VDLD-----------FVQNAEPYKGPTVVAGYKIIPTTSAGLAQIQQKVIAVLDKINNMP 435
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T T+ + + + + + Q ++ K+ ++ + +
Sbjct: 436 IEPMLNQTTQTLAEGQKVVKEANAMLAQLNKVMASKEFQNLPHDLQKTLQEMNRAMQGFQ 495
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L T N
Sbjct: 496 PGSPAYNKMVDNMQRLDQVLREVQPLLRTLNNKSNA 531
Score = 40.3 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 44/448 (9%), Positives = 126/448 (28%), Gaps = 38/448 (8%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
+V++L ++ Y S + I + +G+ + ++ + +G + +
Sbjct: 27 IVTLLLGAWVLFYHFSNQG-------PEVTLITYNAEGIEAGKTKIKSRSVDIGVVESVT 79
Query: 73 LDQEYPNHSLAKALIRPDTP--LYPSTTATI-----------RTQGLAGITYIELSTLRK 119
LD + + + KA + + L + I L YIEL
Sbjct: 80 LD-DNFSRVIIKARLNNEMKELLRTDSAFWIVKPTIGRDGVTGLGTLLSGAYIELQPGLA 138
Query: 120 EKKTIFQIATE------RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
K+ + + + + S ++ + + + +
Sbjct: 139 AKEHFEFTLLDTPPLASPDAKGIRVVLVSDKAGQLNPGDPVLFRGYRVGSVETSDFDMDK 198
Query: 174 KPLTTTIANIETISTVLANNISHI------DKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + ++++N+ M S + ++ + +
Sbjct: 199 RDMRYQLFINAPYDKLISSNVRFWKDSGIAFDMSSQGVHVEMGSIATLLTGGVSFDVPTG 258
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ Q+ +N N+ + D Q V + L +
Sbjct: 259 WVPGANVKENTEFQLFDNQSSIQNSLYTQYQDFVLFFSDSVRGLQPGAPVEFRGIRLGTV 318
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
++ L+N + + + + + +N + S
Sbjct: 319 AQVPFYTEGLDQSLDNDFRIPVLIHIEPERFSKDVGKNFNLKNELNLALKDGLRASLKSG 378
Query: 348 KF--AELMSKINNISALKENNSLFKDAQ-RAMHTFRDTSEKINRYIPSIGNNLQNF-SQS 403
L ++ + + A + + T +I + + ++ + + N +
Sbjct: 379 NLLTGALFVDLDFVQNAEPYKGPTVVAGYKIIPTTSAGLAQIQQKVIAVLDKINNMPIEP 438
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFER 431
LN + + Q+ V + L +
Sbjct: 439 MLNQTTQTLAEGQKVVKEANAMLAQLNK 466
>gi|294786150|ref|ZP_06751404.1| putative phage infection protein [Parascardovia denticolens F0305]
gi|315227353|ref|ZP_07869140.1| phage infection protein [Parascardovia denticolens DSM 10105]
gi|294484983|gb|EFG32617.1| putative phage infection protein [Parascardovia denticolens F0305]
gi|315119803|gb|EFT82936.1| phage infection protein [Parascardovia denticolens DSM 10105]
Length = 766
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 51/450 (11%), Positives = 142/450 (31%), Gaps = 24/450 (5%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSVRF 60
S +G+ V+ L W + + +D G + + + G V
Sbjct: 13 SNATKNVIGIVVLMGLVIVPAMYAWFNIAGSWDPYGNTKNLKVAVVDKDKG-YKSDLV-- 69
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
PVG + + A + + + + G I ++
Sbjct: 70 ---PVG----INAGNTIESTLRANTQLNWQFVDRKTGLDGVYS-GKYYAAIIIPENFSRD 121
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
T+F +R + S + +S K I NI L ++
Sbjct: 122 MMTLFSTHAKRARIVYYINEKSNAIAPHITDQGADTIVSQIDATFSKTIANIALELANSV 181
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + S + + + + + ++ ++++ L +I +
Sbjct: 182 SKYSSDSNANLYLSNLVTNLTIMSGNLSNGANQLRAYSSLLGSAVDLMDSANSIMQETGQ 241
Query: 241 Q---ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ +IQ + + +D + ++ +++ Q + +D + +S + S+
Sbjct: 242 DAGKLSSSIQGMNKSVRSVNDALASSSAAMQKALQASAASVKALDSQIDSLASGITSQSD 301
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
+ E S + + ++ S T + T + S L ++I+
Sbjct: 302 AWGAEAQKLSQDVSTQAGRYDQAANSLQKLRDSVNQTATSTTFDDQAKSHLLGRLDAQIS 361
Query: 358 NISALKEN----NSLFKDAQRAMHTFRDTS----EKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ + ++ ++ D A T + T+ + + + S+ +++ N ++
Sbjct: 362 QLRTVAQDHRHLSTTLTDTVNAASTVKSTAATQKANLKKQVASVAQAIKSAQDDYTNKLK 421
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ L +++ ++ + + G
Sbjct: 422 PQLDSLAASLSQLATSVSTVSVDLTSSLNG 451
>gi|208780389|ref|ZP_03247730.1| ABC transporter, periplasmic protein [Francisella novicida FTG]
gi|208743757|gb|EDZ90060.1| ABC transporter, periplasmic protein [Francisella novicida FTG]
Length = 157
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 4/111 (3%)
Query: 21 SFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP 78
F + +S ++ ++ + +V L T++SV+ G+ +GR+ + L++ Y
Sbjct: 1 MLFLTFKVSGTSFKAFNTQEYTITADFK-NVGSLRTNASVKIAGVEIGRVTKIALEKSYN 59
Query: 79 NH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
++ I D + + +A+I G+ G Y+ LS ++ I IA
Sbjct: 60 GFMAVVTMAINSDKKIPANYSASIAMSGILGDNYVALSPPSEDIMAIAGIA 110
>gi|229494445|ref|ZP_04388208.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318807|gb|EEN84665.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 365
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/302 (9%), Positives = 77/302 (25%), Gaps = 14/302 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ +V +V L + Y R++ V V G+ S V
Sbjct: 1 MNTRK---AVTAMLVVTLAIALPGWYIFGRTD----QSKTVYADFSY-VGGIYEGSKVTV 52
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + L +A + + +IEL
Sbjct: 53 LGVGVGTVTSVEPRGTS---VRVAMSMPDSVDLPADASAYVLNPSVISDRHIELGPAYTG 109
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+T+ +RA P + + + + + ++ ++
Sbjct: 110 GETLKDGDQIPIERAHS---PIDFDGLMGSVSTLADAFAGDGGNLGDLVSRGAAGWQGQG 166
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T L+ + + ++ + + +
Sbjct: 167 DQFNTAIRNLSTATGVVGARSEDIGALVDNLNTLMNALDARQVSLDELVGDLGVLGDQWA 226
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+I + DQ+ + + + + + + L+ +
Sbjct: 227 SQNMDISQPLQDLQVVFDQLNSFMTTHGDDVGAIADNVRVLGDTLAAKEPGLAEFMDLVP 286
Query: 301 LE 302
L
Sbjct: 287 LM 288
>gi|289662321|ref|ZP_06483902.1| toluene tolerance protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289667684|ref|ZP_06488759.1| toluene tolerance protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 183
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 36 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVSDISLDPTKFDSI-VTLSLDTKYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|78059931|ref|YP_366506.1| paraquat-inducible protein B' [Burkholderia sp. 383]
gi|77964481|gb|ABB05862.1| Paraquat-inducible protein B' [Burkholderia sp. 383]
Length = 556
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/395 (9%), Positives = 93/395 (23%), Gaps = 38/395 (9%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ L S V + + VG + LD Q + D + T +
Sbjct: 173 TDLGSLDIGSPVYYRHLMVGHVASYKLDMQSRDMNLQVFIDAPYDRLVTTDTRFWNASGM 232
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+ L + TI A + + A+N + ++
Sbjct: 233 DLSLDANGLKLKTQSVATIVGGGIAFATPEDSDAAAARAGRLFTLADNETAAMAVPDGPS 292
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
Q I E+PL + + ++ S
Sbjct: 293 QLIRLRFEQPLRGLAVGAPVEFSGIDMGKVVSTQLDFDRTTRRFQSIVM----------- 341
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ K N + E G +
Sbjct: 342 ----------------VKVYPYRLGPVIEKLQKTEGNGNPRAAQFLAGLVEHGLRAQART 385
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + ++ + + + ++ I DS
Sbjct: 386 GNLLTEQLYISFDFVKNAPKVPFDANATPLTLPTVPSTFDKLPEQLADIVDKINKMPLDS 445
Query: 346 SQK-FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
K ++ ++ + + ++ N+ ++ + +
Sbjct: 446 IGKHVDSSLTNLDATLKQVNGQ--------LLPSTTRMLDQANQTFGTLRQGIAD-DGPL 496
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ N + ++Q T + R P+ ++ G
Sbjct: 497 QENLTNTLTEVQRTARSLRTLTDMLGRRPESLLRG 531
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
DGP + +R + GL+ + V F+GI +G++V LD +
Sbjct: 289 DGPSQLIRLRFEQPLRGLAVGAPVEFSGIDMGKVVSTQLDFDRTTR 334
>gi|325132833|gb|EGC55513.1| paraquat-inducible protein B [Neisseria meningitidis M6190]
Length = 546
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/388 (8%), Positives = 98/388 (25%), Gaps = 32/388 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + + +
Sbjct: 297 FFKQSVRGLTVG-------------------SPVEYKGLNVGVVSDVPYFDRNDSLHLFE 337
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ + + + Q T + T ++
Sbjct: 338 NGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQ 397
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
S + D+ + ++ ++ S LN S +
Sbjct: 398 PSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLNASLAELK 457
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ IN +S + ++ + + + R T + ++ D+QN
Sbjct: 458 STLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 505
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 506 TLQSLDKTLKDVQPVINTLKEKPNALIF 533
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 24/261 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + + +
Sbjct: 391 MIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T +I L + +L + + L + V NT+ +
Sbjct: 451 ASLAELKSTLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQSL 510
Query: 268 RETTQTFQEVGQKIDHLLSDF 288
+T + Q V + +
Sbjct: 511 DKTLKDVQPVINTLKEKPNAL 531
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/458 (10%), Positives = 119/458 (25%), Gaps = 37/458 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + ++ + + +L+ T+ + NN
Sbjct: 432 DLLDKFGKLPLDKTVSGLNASLAELKSTLKSINTLSNN 469
>gi|118463703|ref|YP_883680.1| mce-family protein mce2c [Mycobacterium avium 104]
gi|254776981|ref|ZP_05218497.1| mce-family protein mce2c [Mycobacterium avium subsp. avium ATCC
25291]
gi|118164990|gb|ABK65887.1| mce-family protein mce2c [Mycobacterium avium 104]
Length = 480
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 78/286 (27%), Gaps = 6/286 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ T VGL + + + G++ V+ G
Sbjct: 5 TEFNRTRVGLMGALVTVLVVGVGQSFTSVPMLFATPTYY-AQFTD-AGGINVGDKVQIAG 62
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + L + + L + P + + A IRT G + + +
Sbjct: 63 VNVGLVSSLVIRGD---RVLVGFSM-PGKTIGAQSRAAIRTDTFLGRKNMAIQPRGADPL 118
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
I + ++ + + + S + + + L +
Sbjct: 119 PPNGIIPSGQTTTPYQIYDAFVDVTKAATDWNIDVVKRSLNVLSETFDQTAPHLKAALDG 178
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ S + N I +++ ++ + + Q ++ +
Sbjct: 179 VARFSGTIGNRDEQIKQLLTNADKITRVLGDRSGQVDALLVNANTLLAAFRQRSQALSAL 238
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
L N+ S + + +R+ E+ ++ L
Sbjct: 239 LSNVSAVSTQVSGFIKENPDAHQVLRQLGTVSDELVKRKKELSDVL 284
>gi|83309429|ref|YP_419693.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
gi|82944270|dbj|BAE49134.1| ABC-type transport system [Magnetospirillum magneticum AMB-1]
Length = 320
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/309 (12%), Positives = 103/309 (33%), Gaps = 12/309 (3%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ S+ Y VG FV+++L + L+ G + +V G+ + V
Sbjct: 1 MKDSRINYAMVGGFVLAMLVSLVVVVVVLTGRTGATGSYYTRL----SNVAGIKYGTKVT 56
Query: 60 FNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
F G PVG++ + E + + + D + + A + GL +++
Sbjct: 57 FEGFPVGQVEKIQPLHEGNATAFRLEISVANDWRIPKDSQARVAASGLLAAATLDIKGGT 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ------KIIENI 172
+ A I A + + I++ T+ K S + Q + ++
Sbjct: 117 SPEMLPPGSDIPSGPAANIFAAMNDMAGQITDLNQTALKPLLFSLNQQVGSLGTILEKHA 176
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ + + + ++ + ++KM T + + D L ++
Sbjct: 177 PELMANLLLVTQDLAAKTPKITADVEKMTGTLSNKVVTDANAERIRETLDNAARLSAGLQ 236
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + + + + N + + H ++ +++ V +D +
Sbjct: 237 DSRKKVDSMLTSLDKSITGNQDNIDQSLKDLRHTLQAVSRSIDSVTYNLDGTTRNLHEFS 296
Query: 293 KSKETSAFL 301
+ + +
Sbjct: 297 RQIRDNPGV 305
>gi|254522219|ref|ZP_05134274.1| ABC transporter substrate-binding protein [Stenotrophomonas sp.
SKA14]
gi|219719810|gb|EED38335.1| ABC transporter substrate-binding protein [Stenotrophomonas sp.
SKA14]
Length = 174
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ E+ R V L + V+ G+ VG++ + LD +
Sbjct: 36 SWGSEGYELKARFSQ-VGQLRKQAPVKIGGVTVGQVASIDLDPVKFESI-VTLRMDSKVK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|54027605|ref|YP_121847.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54019113|dbj|BAD60483.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 502
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/122 (18%), Positives = 48/122 (39%), Gaps = 1/122 (0%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V +L F+ + ++R Y P V+ + + DGL +++ V+F G+ VG + + +
Sbjct: 20 VCGLLVFAVVLGFLMARYQGYFVPKVNVVANLTTTGDGLPSEADVKFRGVLVGAVDEVEV 79
Query: 74 DQEYP-NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ + + + TA + L +T +EL + + +
Sbjct: 80 AAKGELQKVQIELKPEYAKSIPANVTARVVPSNLFAVTSVELVFNGPSDTYLSEGSVIEE 139
Query: 133 QR 134
R
Sbjct: 140 DR 141
>gi|220917187|ref|YP_002492491.1| Mammalian cell entry related domain protein [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219955041|gb|ACL65425.1| Mammalian cell entry related domain protein [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 564
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/369 (9%), Positives = 103/369 (27%), Gaps = 10/369 (2%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VG+ V L F+ + + + V R GL+ S V+
Sbjct: 1 MKPAVNKALAVGVLVAVGLAAFLFAFTFFKKGGYSEADSYLVYARFSD-ATGLTWKSKVQ 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG-LAGITYIELSTLR 118
GI VG + + LD+ +L + I PL+ L +E+
Sbjct: 60 IAGIQVGEVAKISLDKN---KALLQIRIDRSVPLHTDACLYKSFPSALLPDALLEVIAGS 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + + S ++ +K SD + + ++ +
Sbjct: 117 DAAPLLSSLPEAEREIKCVREATSVQQ----LLDSMAKIASDVQLVTGDLAKTVQGDQGS 172
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+E ++ + + + ++ ++ +
Sbjct: 173 LREIVENLARITRQVDQVVAQNSANLSELIANTRDFTADLREISARDKDRIHSILANVDE 232
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ L+ S + + + + + +
Sbjct: 233 LTARLKVAAGSLQGILDGGGSGAPGGGPAGPPGVPGAPGAPGVPGTVGATPAVASQQAQA 292
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
++ ++ S + + + + + + T E + L + + ++ + ++
Sbjct: 293 KGVQQAVARLNDSLSRLDQLLAKVQEGKSVAGRLLTDEKMGRQLGTAVEGVSDYVDRLQK 352
Query: 359 ISALKENNS 367
+ + S
Sbjct: 353 MQIEVQLRS 361
>gi|316984817|gb|EFV63774.1| mce related family protein [Neisseria meningitidis H44/76]
gi|325199735|gb|ADY95190.1| paraquat-inducible protein B [Neisseria meningitidis H44/76]
Length = 546
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/388 (8%), Positives = 98/388 (25%), Gaps = 32/388 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + + +
Sbjct: 297 FFKQSVRGLTVG-------------------SPVEYKGLNVGVVSDVPYFDRNDSLHLFE 337
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ + + + Q T + T ++
Sbjct: 338 NGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQ 397
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
S + D+ + ++ ++ S LN S +
Sbjct: 398 PSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLNASLAELK 457
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ IN +S + ++ + + + R T + ++ D+QN
Sbjct: 458 STLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 505
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 506 TLQSLDKTLKDVQPVINTLKEKPNALIF 533
Score = 57.3 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 24/261 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + + +
Sbjct: 391 MIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T +I L + +L + + L + V NT+ +
Sbjct: 451 ASLAELKSTLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQSL 510
Query: 268 RETTQTFQEVGQKIDHLLSDF 288
+T + Q V + +
Sbjct: 511 DKTLKDVQPVINTLKEKPNAL 531
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/458 (10%), Positives = 119/458 (25%), Gaps = 37/458 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + ++ + + +L+ T+ + NN
Sbjct: 432 DLLDKFGKLPLDKTVSGLNASLAELKSTLKSINTLSNN 469
>gi|325138735|gb|EGC61287.1| paraquat-inducible protein B [Neisseria meningitidis ES14902]
Length = 546
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/388 (8%), Positives = 99/388 (25%), Gaps = 32/388 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
++ + A + + + ++ S+ +
Sbjct: 237 GSGITLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + + +
Sbjct: 297 FFKQSVRGLTVG-------------------SPVEYKGLNVGVVSDVPYFDRNDSLHLFE 337
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ + + + Q T + T ++
Sbjct: 338 NGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQ 397
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
S + D+ + ++ ++ S LN S +
Sbjct: 398 PSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLNASLAELK 457
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ IN +S + ++ + + + R T + ++ D+QN
Sbjct: 458 STLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 505
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 506 TLQSLDKTLKDVQPVINTLKEKPNALIF 533
Score = 57.3 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 24/261 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + + +
Sbjct: 391 MIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T +I L + +L + + L + V NT+ +
Sbjct: 451 ASLAELKSTLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQSL 510
Query: 268 RETTQTFQEVGQKIDHLLSDF 288
+T + Q V + +
Sbjct: 511 DKTLKDVQPVINTLKEKPNAL 531
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 45/458 (9%), Positives = 118/458 (25%), Gaps = 37/458 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S + A +
Sbjct: 192 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGITLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + ++ + + +L+ T+ + NN
Sbjct: 432 DLLDKFGKLPLDKTVSGLNASLAELKSTLKSINTLSNN 469
>gi|226361934|ref|YP_002779712.1| Mce family protein [Rhodococcus opacus B4]
gi|226240419|dbj|BAH50767.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 407
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/288 (10%), Positives = 86/288 (29%), Gaps = 8/288 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
++ +GL ++I + + G GL + V G+
Sbjct: 3 RSKTARMGLIGIAITLIVVLTSMNFEKLQYLTTSS-RYSAYF-GDTGGLLSGDKVMIAGV 60
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG++ + LD + L + L T +I+T+ + G Y++++ +
Sbjct: 61 EVGKVHSVELDGD---KVLIEFTAD-GVRLGSKTELSIKTRTVLGNKYLQVTPRGGDDLL 116
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
Q + + + +Q + + +++ A +
Sbjct: 117 ATDDVIPLAQTTTPYLLTDALGDLTTTISG--LDTDKLTGALQTLGDTLDQTQPNLSAAL 174
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ +S S + ++ + + + D + + A Q+ + I
Sbjct: 175 DGMSRFSDTVSSRDQLIQDLSRNAESVTGVLSERSNQIDRLLVDGNTLFASLEQRRHAID 234
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + + V + +R ++ + ++
Sbjct: 235 TLLGNVTAVTAQVNGLVDDNEAQLRPVLDQLNTTTSLLNQQKDNLAAS 282
>gi|302523964|ref|ZP_07276306.1| MCE family protein [Streptomyces sp. AA4]
gi|302432859|gb|EFL04675.1| MCE family protein [Streptomyces sp. AA4]
Length = 407
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/295 (13%), Positives = 87/295 (29%), Gaps = 5/295 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+S F+ L V I+ V L S V+ N +PVG++ + L
Sbjct: 17 VLSGCAFNGVYDVPLPGGADLGSHPYTVKIQFKD-VLDLVPQSGVKVNEVPVGQVKSIGL 75
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATER 131
+ H+ + D L + A ++ L G Y+E + + AT
Sbjct: 76 TPDG-WHAEVTVEVNGDVKLPANAMANVKQSSLLGEKYVELASPGGTEATGELANGATIP 134
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
R + + + +++ A + + ++
Sbjct: 135 LART-GRDVQVEEVLGALSLLLNGGGVEQLNTITKELNNATAGREPDLKALLANANELVT 193
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
N + + S + + Q+ Q++ + +N
Sbjct: 194 NLDNQSANITRALDGLNRLSMTLRDQKDKLVGAVDNLGPGLGVLEQQRGQLVTMLNALNN 253
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
++D V + D+ + QK+ SD ++ T F + +
Sbjct: 254 LSGVATDTVNKSKADLVADLKALTPTLQKLGEAGSDLPKALEILLTYPFTDQAYN 308
>gi|118468785|ref|YP_889044.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118170072|gb|ABK70968.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 486
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/309 (11%), Positives = 87/309 (28%), Gaps = 9/309 (2%)
Query: 44 RIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRT 103
+ S G+ VR +G+ VG I + + + P+ A I
Sbjct: 38 ALFTSATGIYPGDDVRVSGVKVGTIEAITPEGTQT---RLTLKVDRGVPIPADAKAVIVA 94
Query: 104 QGLAGITYIELSTLRKEKKT-IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
Q L Y++L+ + + + A R A P + + ++ S
Sbjct: 95 QNLVAARYVQLAPAYRSEGPTLPDDAVIGLDRT---AVPVEWDEVKEQLTRLATELGPRS 151
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+ + + + +S + +++ + D T
Sbjct: 152 GVDGTSMARFIETTADAMEGNGEKLRNTISQLSGVARILAEGS--GNIVDIIKNLQTFVT 209
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ ++ + A + S+ + + R + + ++I
Sbjct: 210 ALRDSNQQVVAFQNRLATLTSVVDGSRSDLDAALKNLSVAVGEVQRFVAGSRNQTSEQIQ 269
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
L S+ + + L +IA + +I + Q + ++ +
Sbjct: 270 RLADVTSNLVDQRLQVENLLHIAPNAFVNGYNIYNPDSGSPVGQFVFHNMSEPLHFICGA 329
Query: 343 NDSSQKFAE 351
+ +
Sbjct: 330 IGAVENVTA 338
>gi|307103925|gb|EFN52182.1| hypothetical protein CHLNCDRAFT_37045 [Chlorella variabilis]
Length = 392
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 75/277 (27%), Gaps = 6/277 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLFV S + F+ I W I G++ + VR G+PVG ++
Sbjct: 108 VGLFVFSGIGFALMLIAWARGGQLGRRGQGYQAILEFPVACGITVGTPVRIRGVPVGGVL 167
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ E L + T + ++ GL I+++ +
Sbjct: 168 SVQPSLE-KVDVLVEMK-DSTTVIPRNSLIEANQSGLIAEPLIDITPQTPVPQYQANPLD 225
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
E + E + + + + +E+
Sbjct: 226 ED----CEKEGLVVCHQGRIRGERGVALDDLVYLCTKIARQMDTQGVDRVFEAMESARAA 281
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ + + + + + N + ++ +A + Q + +
Sbjct: 282 IEDAKPLLSQAVKLSDEILPLLTELRAGNLVGNVEALTQVAAEAAADIQRLQTEVLTENN 341
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+S + T+H + T +
Sbjct: 342 VKALRESVQTLTKTLHHIERITGDLGGLTGDTRVTNH 378
>gi|71274638|ref|ZP_00650926.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Dixon]
gi|71899650|ref|ZP_00681804.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Ann-1]
gi|170730904|ref|YP_001776337.1| toluene tolerance protein [Xylella fastidiosa M12]
gi|71164370|gb|EAO14084.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Dixon]
gi|71730602|gb|EAO32679.1| Mce4/Rv3499c/MTV023.06c protein [Xylella fastidiosa Ann-1]
gi|167965697|gb|ACA12707.1| toluene tolerance protein [Xylella fastidiosa M12]
Length = 178
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-L 93
G + + L + VR +G+ +G++ + LD + + L
Sbjct: 36 GGNQYTLTAHFTQ-IGQLRKQAPVRISGVNIGQVSNITLDPKTFESV-VTLSLDKQYKDL 93
Query: 94 YPSTTATIRTQGLAGITYIELSTL 117
T+A I T GL G +YI L
Sbjct: 94 PADTSANILTSGLLGESYINLLPG 117
>gi|325915572|ref|ZP_08177882.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas vesicatoria
ATCC 35937]
gi|325538210|gb|EGD09896.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas vesicatoria
ATCC 35937]
Length = 177
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +I R + L + V+ G+ +G++ + LD + +
Sbjct: 36 GFGSSQYTLIARFSQ-IGQLRAQAPVKIGGVTIGKVADISLDPTKFDSV-VTLSLDTKYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|163755176|ref|ZP_02162296.1| hypothetical protein KAOT1_07148 [Kordia algicida OT-1]
gi|161324596|gb|EDP95925.1| hypothetical protein KAOT1_07148 [Kordia algicida OT-1]
Length = 323
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 36/110 (32%), Gaps = 5/110 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + ++ L +F I +L + + GL + V
Sbjct: 1 MKI-SREIKTAFLAITALVLLYFGISYLMSRSVLSNDRIFY--AEYNDIGGLIPATKVTI 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
NG VG++ + L S+ + D ++T ++ G G
Sbjct: 58 NGFKVGKVQDIQLQA--SGKSMVTIALENDFQFSKNSTVQLQENGFIGGK 105
>gi|325673334|ref|ZP_08153026.1| hypothetical protein HMPREF0724_10808 [Rhodococcus equi ATCC 33707]
gi|325555924|gb|EGD25594.1| hypothetical protein HMPREF0724_10808 [Rhodococcus equi ATCC 33707]
Length = 356
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/260 (13%), Positives = 87/260 (33%), Gaps = 9/260 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
Y + + + GLS V G+P GR+ G+ + + H + PL
Sbjct: 56 YLSRTSPYSAEL-ANASGLSDGDPVYVAGVPAGRVEGIDIAGD---HVRVDFRLDDGQPL 111
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA-----TERNQRAMITATPSGINYFI 148
TTA++R + + G Y+E+ + +
Sbjct: 112 GNRTTASVRLETVLGKRYLEVVPAGVVTAENADATAANVIPLARTTVPYSLDDISRDATD 171
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ E + + R + +++ + + L +A + S V++ N ID+++ ++
Sbjct: 172 AATEIDTASLEAMMRTLSEVMPDDPEQLGRVLAGVSGASAVVSRNAEQIDQLLEMSRSVS 231
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + + T A+ + + +++EN++ + + + +
Sbjct: 232 DLAVRQGDSLSTTVANAQTIVRTLAVRREVLTELVENLRSVLSTLASTYTEHEEEFGQMT 291
Query: 269 ETTQTFQEVGQKIDHLLSDF 288
+ Q+ +
Sbjct: 292 TNLVDVTDTLQRNADHIGQI 311
>gi|166710004|ref|ZP_02241211.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 183
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 36 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVSDISLDPTKFDSI-VTLSLDTRYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|306803688|ref|ZP_07440356.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu008]
gi|308349583|gb|EFP38434.1| MCE-family protein mce3D [Mycobacterium tuberculosis SUMu008]
Length = 401
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/322 (9%), Positives = 81/322 (25%), Gaps = 9/322 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
D ++ + +G+ V G+PVG+IV + +
Sbjct: 4 MRTADAAARTTVVAYFDNSNGVFAGDDVLIRGVPVGKIVKIEPQP---LRAKISFWFDRK 60
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ A I + L I+L+ T+ +R ++ + +
Sbjct: 61 YRVPADAAAAILSPQLVTGRAIQLTPPYAGGPTMADGTVIPQERTVVPVEWDDLRAQLQR 120
Query: 151 AENTSKKISDSSRHI-----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ +N+ T I +S ++ H + T
Sbjct: 121 LTALLQPTRPGGVSTLGALINTAADNLRGQGATIRDTIIKLSQAISALGDHSKDIFSTVT 180
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + + + + + ++ ++I + + +
Sbjct: 181 NLSTLVTALHDSADLLERLNHNLAAVTSLLADGPDKIGQAAEDLNAVVADVGSFAAEHRE 240
Query: 266 DVRETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
+ + + + D L + S NI + + + A + +
Sbjct: 241 AIGTASDKLASITTALVDSLDDIKQTLHISPTVLQNFNNIFEPANGALTGALAGNNMANP 300
Query: 325 RQKIISTINTIENITSNLNDSS 346
+ I +
Sbjct: 301 IAFLCGAIQAASRLGGEQAAKL 322
>gi|271964522|ref|YP_003338718.1| resistance to organic solvents ABC transporter periplasmic
component-like protein [Streptosporangium roseum DSM
43021]
gi|270507697|gb|ACZ85975.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component-like protein
[Streptosporangium roseum DSM 43021]
Length = 338
Score = 65.3 bits (156), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 53/164 (32%), Gaps = 4/164 (2%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
V + GL +S V+ GI VG + + LD+E ++ + P + + TA
Sbjct: 40 RVSAVFTHAGQGLDPNSPVKIRGITVGGVSSVTLDRE--GRAVIGMHVEPGVKVPETVTA 97
Query: 100 TIRTQGLAGITYIELSTLRKEK--KTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
I + G ++ L E + A A + S + +
Sbjct: 98 AIEPSSVFGPKFVNLILGTGETAGPYLGDGAVITRTEAPTDLSDSLSAAYEGLGAVDPQD 157
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
I+ + + ++ + I + I V + +
Sbjct: 158 ITTIVHTLGRGLDGKGPQIGGIIDSTGKIVEVAHRRRGEFRRFI 201
>gi|119776211|ref|YP_928951.1| mce-like protein [Shewanella amazonensis SB2B]
gi|119768711|gb|ABM01282.1| mce-related protein [Shewanella amazonensis SB2B]
Length = 156
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 54/132 (40%), Gaps = 2/132 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ VGLF+++ + ++ ++ G + + +V GL S V+
Sbjct: 1 MLSRKVEIWVGLFLLAGIAAFLVLVFKVANVEVQAGNSSYTLYARFANVGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD E ++ + +++ +I T GL G ++ L+
Sbjct: 61 GGVVVGRVSKIELDPERL-VAVVSLSMDGRYRNFPETSSLSILTSGLLGEQFLGLTPGFV 119
Query: 120 EKKTIFQIATER 131
+ +R
Sbjct: 120 DDDIAMLKDGDR 131
>gi|302525562|ref|ZP_07277904.1| secreted protein [Streptomyces sp. AA4]
gi|302434457|gb|EFL06273.1| secreted protein [Streptomyces sp. AA4]
Length = 445
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 45/134 (33%), Gaps = 3/134 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + Y +GL + + F ++ + P+ V + L V+
Sbjct: 1 MRKRLQYQLLGLIFLV--VAALFFTTTIAAYRKVFTPVTLVKLETDHVGSQLRVGGDVKV 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG I + ++ LA + + +A + + L G Y+ L +
Sbjct: 59 RGMLVGEIRDVRPVGDHAELELA-LQPDKTEVIPSNVSARLLPKTLFGERYVALQLPERA 117
Query: 121 KKTIFQIATERNQR 134
++ I R
Sbjct: 118 QRPIKAGDVIPQDR 131
>gi|120405553|ref|YP_955382.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958371|gb|ABM15376.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 454
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/320 (10%), Positives = 89/320 (27%), Gaps = 8/320 (2%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ S +G+ +V G+PVG+I + E +
Sbjct: 32 NRTHAVAYFENS-NGIYAGDAVSIVGVPVGKIESIEPQPES---VKVSFWYDSKYKVPAD 87
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A I + L I+L+ + A +R + + ++ +T +
Sbjct: 88 AKAVILSPTLVTARTIQLTPAYTGGPVMENDAVIPRERTAVPVEWDEVRQQLAKLADTLQ 147
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + I I + I + + + + T
Sbjct: 148 PT--EPGGVSPLGSVINTTADNLRGEGANIRDTVIKLSQAISALGDNSTNIFSTVKNLAT 205
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ T+L + + + + +N V V + ++
Sbjct: 206 LVSALQDSTNLMRQLNQNLASVTGLLANDPDEVANAVRDLDKAVGEVQTFVADNRESLGT 265
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIE 336
K+ + + + + FL ++ N + + I + + +
Sbjct: 266 TSDKLAGVTQALTDSL--ADVKQFLHVAPNTLQNYVNIWQPAQGAVSSVPMINNFADPVS 323
Query: 337 NITSNLNDSSQKFAELMSKI 356
+ + +S+ AE +K+
Sbjct: 324 FLCGAVQAASRLGAEESAKL 343
>gi|317969141|ref|ZP_07970531.1| hypothetical protein SCB02_06372 [Synechococcus sp. CB0205]
Length = 272
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 82/267 (30%), Gaps = 3/267 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++++ LF+ S I L+R + + + + G+ +V+ +G
Sbjct: 8 TRSHEKL--LFLGSGAVLLGALIIGLAREQHWGQRFLNLRLV-AANASGIRPGQAVQISG 64
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG++ L + + R + P +TA+ QGL G ++ +S +
Sbjct: 65 MQVGQVRSLEMLPNAKVQVKFQIDERFAPLVGPRSTASQGQQGLVGEHFLVVSPDPQPWP 124
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ R+ P+ + + + + + I+ E++ L
Sbjct: 125 VSLEKHGMRDTTLPYEQPPAISSLMVDLHQTQKALQATLNNTIKLTAEDVPDTLREIRKT 184
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ ++ + T + + T L +
Sbjct: 185 LGSVDNLSGVVQRETAATAPTLRKMLTQISATGASAEATSNRAQQVLEQTQPILVNTLKE 244
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRE 269
L+ + S ++ + ++
Sbjct: 245 LQQLSSISRKLLQLLVGIGGLEEAPKD 271
>gi|41407954|ref|NP_960790.1| hypothetical protein MAP1856 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396308|gb|AAS04173.1| hypothetical protein MAP_1856 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 419
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 5/128 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ SV V+ ++ + + + R + V +++P S GL + V G+ +G
Sbjct: 25 WLSVAGLVLILVVATAYLLIGALRVTPFAS-SYRVTVQLPES-GGLLPNQDVALRGVRIG 82
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
RI L + N A I + +T A + AG +I +
Sbjct: 83 RIESLQITDNGVNAV---ATITSKVRIPANTVAHVSALSPAGEQFINFEAASDAGPYLHD 139
Query: 127 IATERNQR 134
+ ++R
Sbjct: 140 GSFITSER 147
>gi|226304396|ref|YP_002764354.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183511|dbj|BAH31615.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 365
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/302 (9%), Positives = 76/302 (25%), Gaps = 14/302 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ +V +V L + Y R++ V V G+ S V
Sbjct: 1 MNTRK---AVTAMLVVTLAIALPGWYIFGRTD----QSKTVYADFSY-VGGIYEGSKVTV 52
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + L +A + + +IEL
Sbjct: 53 LGVGVGTVTSVEPRGTS---VRVAMSMPNSVDLPADASAYVLNPSVISDRHIELGPAYTG 109
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+T+ +RA P + + + + + ++ ++
Sbjct: 110 GETLKDGDQIPIERAHS---PIDFDGLMGSVSTLADAFAGDGGNLGDLVSRGAAGWRGQG 166
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T L+ + + ++ + +
Sbjct: 167 DQFNTAIRNLSTATGVVGARSEDIGALVDNLNTLMNALDARQVSLDELVGDLGTLGDQWA 226
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+I + DQ+ + + + + + + L+ +
Sbjct: 227 NQNMDISQPLQDLQVVFDQLNSFMTTHGDDVGAMADNVRVLGDTLAAKEPGLAEFMDLVP 286
Query: 301 LE 302
L
Sbjct: 287 LM 288
>gi|229494600|ref|ZP_04388363.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318962|gb|EEN84820.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 394
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 40/112 (35%), Gaps = 7/112 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
S+ GL ++++ ++ SR G +V +P S L SSV++
Sbjct: 6 SSRITLALRGL--LAVVILILAYVFLFSRGTDSTGSTPQVSAVVPASAGALRVGSSVQYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
G+ VG + + S I + ++ + + + G +
Sbjct: 64 GVVVGAVAEIEP---GTTASTVSLAIDEGAFEDIPSTSQVRLMPRNIFGDFF 112
>gi|224369537|ref|YP_002603701.1| ABC-type transport system involved in resitance to organic
solvents, periplasmic substrate-binding protein
[Desulfobacterium autotrophicum HRM2]
gi|223692254|gb|ACN15537.1| ABC-type transport system involved in resitance to organic
solvents, periplasmic substrate-binding protein
[Desulfobacterium autotrophicum HRM2]
Length = 348
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 86/287 (29%), Gaps = 3/287 (1%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVD-GLSTDSSVRFNGIPVGRIV 69
G F++ L +Y +S + + +P GL + V G G I
Sbjct: 14 GAFILVALIILVAVLYVEGQSYHWFDRTVVYHLILPEEGSHGLKAGAVVMVLGTEAGEIT 73
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ + + + + + TI+ + R +
Sbjct: 74 DIKITPQDRMQARMILRHDFTRFIGTDSRVTIKRVLGMAGDAFVDISGRPGDPLAPEATI 133
Query: 130 ER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
E RA+ + + + I +++ ++ +E+P+ T+A I +I+
Sbjct: 134 EAVVDRAVSDLVQETLEQIRNEILPAIQAIRLAAQGHTRLTARLEEPVLQTVATIGSIAA 193
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ +++ + + + T +++ Q
Sbjct: 194 KIDTGTGMAHRVLTDKHMADDIQTLITHADDMAQGTTRAAGALQSAATQIGTSTRRLHDS 253
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ T+ ++ + ++ +V + + +++S
Sbjct: 254 LDL-LPQTIQTADTTLRNIDQVSKNLIQVTASMSSTIEHIDDQVESL 299
>gi|194334501|ref|YP_002016361.1| Mammalian cell entry related domain-containing protein
[Prosthecochloris aestuarii DSM 271]
gi|194312319|gb|ACF46714.1| Mammalian cell entry related domain protein [Prosthecochloris
aestuarii DSM 271]
Length = 293
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 52/123 (42%), Gaps = 4/123 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
K G+F V + + + + +++ + + + V+ L+ ++ V +G
Sbjct: 8 KWTDVKTGIFFVIGIGLAAYLGLVVGKNSSLFKSETVINM-LATDVESLAENNFVSLSGK 66
Query: 64 PVGRIVGLFLDQEYPN-HSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G + L ++ + L + ++ + + + A+I++ G+ G YI+++T
Sbjct: 67 KIGTVSSLEFVEQNDSLFVLIQMKLQNEFAGIVTQDSKASIQSLGILGDKYIDITTGSGM 126
Query: 121 KKT 123
Sbjct: 127 PVN 129
>gi|84621936|ref|YP_449308.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|84365876|dbj|BAE67034.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 181
Score = 65.0 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 34 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVSDISLDPTKFDSI-VTLSLDTRYK 91
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 92 DLPADTSAGIFTSGLLGESYIGLQPG 117
>gi|296139948|ref|YP_003647191.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
gi|296028082|gb|ADG78852.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
Length = 420
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 90/282 (31%), Gaps = 7/282 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F V + F +R ++ G + + G+ T++ V + G PVGR+ L
Sbjct: 12 VFAVLAIVGIAFVGAQYARIDKMLGFGVYTVKVMLKDSGGIFTNAEVTYRGTPVGRVGQL 71
Query: 72 FLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
L E + P + AT+ + G Y++L + + A
Sbjct: 72 HLVPEG---VQVDLQLDTSRPSVPADVQATVAERSSIGEQYMDLVPKKVAEGVRPTDAVL 128
Query: 131 RNQ---RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ R + T P + S + + ++ + A IE++S
Sbjct: 129 VDGSVIRDVKTQEPIEDFLKHVTVLSESVDPAKLKTVVTELSVALGGNGQNLRALIESLS 188
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ ++D + + + ++ ++ K++ + +Q
Sbjct: 189 RLGKTGTDNLDATLSLITNSTTALGTQAEQSSAIRQWADSLKVVTETLANSDPDVRRLLQ 248
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + S V DV + +D + +
Sbjct: 249 TGNLSATQLSALVQQAGGDVTKVVHDLASQLTAVDKVAPNLK 290
>gi|84394021|ref|ZP_00992759.1| paraquat-inducible protein B [Vibrio splendidus 12B01]
gi|84375358|gb|EAP92267.1| paraquat-inducible protein B [Vibrio splendidus 12B01]
Length = 541
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/403 (9%), Positives = 94/403 (23%), Gaps = 37/403 (9%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
++ + L V +G VGR+ D E
Sbjct: 161 VVVSHNKANQLRVGEPVLHHGFVVGRVEKTSFDYEKKEG--------------------- 199
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ Q Y L + + I + + S + +
Sbjct: 200 KYQLFIFAPYDGLIFEKTQFWLSSGIDVKFGANGLDVNFASIESILTGGVSFDVAESIKP 259
Query: 162 SRH--IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + T S + + + T +T
Sbjct: 260 GLQIKENLQEYTLYDNYDAVLQGKYTTSIEYVLLFEESVRGLRKGAPVEYRGVRIGTVDT 319
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ I + + + ++ V + + E + + G
Sbjct: 320 VPLQIRMDKDGKVSNRIPILIKLEIERVSEVFRAVNAEAFAERVKLQMGEGLRATLKTGN 379
Query: 280 KID-HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
+ L D + + + + ++ I+ I+ + I
Sbjct: 380 LLTGALFVDINFYEDEETYEPREFDGYPVFPVVAGGLTEIQNQITDFLTKINELPLDATI 439
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
NLN S + ++ + + +L +D M T E +
Sbjct: 440 A-NLNGSLASLDTTLKSVDQLMGSEGAKALPQDLSDTMKQLEATLESYDD---------- 488
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+ + +L+ + + P +V+G E
Sbjct: 489 --DSDAYKQLISASEELEHVLKELRPLIKVLNDKPNALVFGSE 529
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV----GLFLDQEYPNHSLAKALIRPDTP 92
E ++ SV GL + V + G+ +G + + +D++ + LI+ +
Sbjct: 287 SIEYVLLFEESVRGLRKGAPVEYRGVRIGTVDTVPLQIRMDKDGKVSNRIPILIKLEIE 345
>gi|254820126|ref|ZP_05225127.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 468
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 3/115 (2%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ + ++ N G + GL ++V + G VGR+ + +
Sbjct: 3 GIAAAVTVFGYIKVENLIPGLGQYKVTVQLSQAGGLYKRANVTYRGTYVGRVKDVRITPT 62
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
A L++ + A + +Q G Y+ L + +
Sbjct: 63 G---VDAVLLLKSGLDIPSDLDAQVHSQSSVGEQYVSLLPRNGNSRPLRDGDVIP 114
>gi|21245053|ref|NP_644635.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str.
306]
gi|21110784|gb|AAM39171.1| toluene tolerance protein [Xanthomonas axonopodis pv. citri str.
306]
Length = 179
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 34 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVADISLDPTKFDSI-VTLSLDTKYK 91
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 92 DLPADTSAGIFTSGLLGESYIGLQPG 117
>gi|294664972|ref|ZP_06730283.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292605250|gb|EFF48590.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 181
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 36 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVADISLDPTKFDSI-VTLSLDTKYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|328880852|emb|CCA54091.1| possible lipoprotein [Streptomyces venezuelae ATCC 10712]
Length = 407
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/121 (17%), Positives = 32/121 (26%), Gaps = 20/121 (16%)
Query: 11 GLFVVSILFFSFFSIYWLS------------------RSNQYDGPMAEVIIRIPGSVDGL 52
G V ++ L V + V L
Sbjct: 13 GAGAVGVIAVGLGLAVILGATPANPFRFDGIEDLPLPGGADLGSHPYTVTAEL-DDVLSL 71
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
S+V+ N + VGR+ + L + I D L A + L G YI
Sbjct: 72 VPQSAVKVNDVAVGRVTAIEL-GTGDWSARVTLKINGDVRLPAGAGARLEQSSLLGEKYI 130
Query: 113 E 113
+
Sbjct: 131 Q 131
>gi|73666756|ref|YP_302772.1| hypothetical protein Ecaj_0123 [Ehrlichia canis str. Jake]
gi|72393897|gb|AAZ68174.1| Hypothetical membrane protein [Ehrlichia canis str. Jake]
Length = 149
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 5/129 (3%)
Query: 4 KNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ G V+ + V P SVDGL + +
Sbjct: 3 RSNVIEIFAGFIVLIAALSIGIIAFKKLPFKNTSHSCYIVKAHFP-SVDGLDMGDDITLS 61
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ +G + + LD+ + + I+ + L ++A++ G YI+++ +
Sbjct: 62 GVKIGTVTSISLDRNFTP--IVTMCIQKNVLLPSDSSASLSLSNFLGRRYIDIALGSNQD 119
Query: 122 KTIFQIATE 130
E
Sbjct: 120 SIPAGGFIE 128
>gi|261211867|ref|ZP_05926154.1| paraquat-inducible protein B [Vibrio sp. RC341]
gi|260839217|gb|EEX65849.1| paraquat-inducible protein B [Vibrio sp. RC341]
Length = 541
Score = 65.0 bits (155), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/397 (8%), Positives = 108/397 (27%), Gaps = 33/397 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLA 107
LS V + G VGR+ D E + P D + + + +
Sbjct: 168 AGKLSVGDPVMYEGFTVGRVETTQFDVESKKAHYQLFIFSPYDKLVSTRSFFWLNSGINL 227
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ L +++ + E + + +
Sbjct: 228 QLNAEGLEFSLGSVESLLKGGVTFGLLQ----------------EEDAGQPITQQMTEFR 271
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ +++++ + + ++ + +
Sbjct: 272 LFDDVKQIREGMYDDYIEFVMMFDESVRGLKPSAPVEYRGLRIGTVSKVPLRTRTSNIDI 331
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ ++ L + ++ S ++ + +T V L D
Sbjct: 332 STNRIPVLVRIELGRLYDNFNKADLPNLKSSMQQEFFKGLKASLKTGNLVTG---ALYID 388
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ K + + +++ + ++ + + + +LN++ +
Sbjct: 389 TDYYPEEKIDGLRHFEGYPLFPTKQGGFAEVQKQVTDLLRKLNGLPMGDTL-DSLNNTLK 447
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+L++ I +E +L D + ++ T + ++
Sbjct: 448 TSEKLLASAERILKKQETQNLPADIKASLKQLEATLGGFGPE------------STVYHE 495
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ +++L + + F L P +++G +
Sbjct: 496 LETTLKELNQVMAEFKPVLRTINEKPNALIFGDSDAT 532
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 6/58 (10%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY------PNHSLAKALIR 88
E ++ SV GL + V + G+ +G + + L N I
Sbjct: 286 DYIEFVMMFDESVRGLKPSAPVEYRGLRIGTVSKVPLRTRTSNIDISTNRIPVLVRIE 343
>gi|304394645|ref|ZP_07376564.1| putative paraquat-inducible protein B [Ahrensia sp. R2A130]
gi|303293306|gb|EFL87687.1| putative paraquat-inducible protein B [Ahrensia sp. R2A130]
Length = 589
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 62/468 (13%), Positives = 133/468 (28%), Gaps = 46/468 (9%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEV-----------------IIRIPGSVDG-LSTDS 56
VS + +Y + G AE I + G LS +
Sbjct: 126 VSGIGTLLSGVYIAGNWDGESGAPAEYFEALPNPPLVGPGEEGTRIVLRTRAGGQLSAGA 185
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V +GI VGRI L + P T R +GI+ ++
Sbjct: 186 PVLASGIEVGRIGQPLLSESGTT---VTMDAFVKAPYDKRLTVNARFWNASGISVNVGAS 242
Query: 117 LRKEKKTIFQIATERN---QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
K E + P + + SD+ +
Sbjct: 243 GLALKVDSLAALLEGGVSFGTPVTGGKPVAEGHVYDVFTTEAAARSDAFESDVAPDLPVS 302
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
L + + S V + + S + D+ + M K
Sbjct: 303 IVLDGDVEGLGIGSIVRQRGAKVGEVVDVVGVAGDDSETNAVKLRIDMDISPTRLGMRKD 362
Query: 234 IDLQKVNQILENIQV------------SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++++ IL + + + Q +
Sbjct: 363 MSVEEMQDILAQRVSRGLRARVASEGLFGQTAIVELVTLPDATAGEISLNQFGRVTLPAA 422
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
++D +S + +N +++ + +T + ++ + + + + +
Sbjct: 423 PAAIADENSGVNGLIKRVSNLPFEALLTNATQALAGVASVTSAAEDVLRS-DGVAQVPKS 481
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI---NRYIPSIGNNLQ 398
L + + L I A++ N + A A+ + ++ + + + S + LQ
Sbjct: 482 LELTLAEIRGLAEDIRKGGAIQNLNETLRTANGALKSIDGAAKTLPGLAKRLNSAADGLQ 541
Query: 399 NF------SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D++ ++R+L T F ER+P ++ GR
Sbjct: 542 AVVNGYSPQSRVYKDLRGVLRELASTAESFRSLARTIERDPSSVLRGR 589
Score = 41.8 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 37/403 (9%), Positives = 92/403 (22%), Gaps = 10/403 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDS-SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
Y + I S G+S S +R + VG + + + AK +
Sbjct: 46 GNYSSRGPLITIVF-QSASGISAGSTELRVRDLRVGVVEKVGFS-DGMGAIEAKLRLDKS 103
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ A + A + N +
Sbjct: 104 IAQFVDADAQFWLVEPRVSARGVSGIGTLLSGVYIAGNWDGESGAPAEYFEALPNPPLVG 163
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+I +R ++ + +L+ + + +
Sbjct: 164 PGEEGTRIVLRTRAGGQLSAGAPVLASGI-EVGRIGQPLLSESGTTVTMDAFVKAPYDKR 222
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
F + + ++ A+ + + +LE V+DV T
Sbjct: 223 LTVNARFWNASGISVNVGASGLALKVDSLAALLEGGVSFGTPVTGGKPVAEGHVYDVFTT 282
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ + D S + + + +
Sbjct: 283 EAAARSDAFESDVAPDLPVSIVLDGDVEGLGIGSIVRQRGAKVGEVVDVVGVAGDDSETN 342
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR----AMHTFRDTSEKI 386
+ ++ + + + ++ +I A + + L +
Sbjct: 343 AVKLRIDMDISPTRLGMRKDMSVEEMQDILAQRVSRGLRARVASEGLFGQTAIVELVTLP 402
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
+ I +L F + L + VN ++N
Sbjct: 403 DATAGEI--SLNQFGRVTLPAAPAAIADENSGVNGLIKRVSNL 443
>gi|296139950|ref|YP_003647193.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
gi|296028084|gb|ADG78854.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
Length = 450
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/341 (11%), Positives = 96/341 (28%), Gaps = 9/341 (2%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ +WL RS + V G+ S VR G+ VG I + +++
Sbjct: 23 GAGWWLVRSAG----ATRITAYFDRGV-GIYAGSDVRILGVKVGEIDEVSPERD---RVR 74
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ + L A T + Y++L + + T A M
Sbjct: 75 VQLHVDRGVQLPQDLWAAQVTPSVISDRYVQLLPVYSDGPTAQSGAVVAEDHTMTPVEID 134
Query: 143 GINYFISNAENTS-KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ +S + ++ + ++++ + L + L+ + +
Sbjct: 135 QVYASVSTLAQALGPEGANKRGALTEVLDVSSQNLAGNGQAMADAIAGLSKAATTLSDSR 194
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
T ++ T D + A + ++ + N + V
Sbjct: 195 DNIAATVKGLNTFVTMLAENDKQVRVFNTQLADLTGYLAGERDDFTKALNLLASALGDVG 254
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREI 321
V D R+ + +I +L+D + + + + + +
Sbjct: 255 AFVRDNRDALTSNVNGLTEITKILNDTRTAQAQILSYLPIAASNLQQAYDGDTGTLTLRP 314
Query: 322 TDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ L + +F +L + + +
Sbjct: 315 NLPDLQDPFGAVCKMADLGKLMPGNPQFEQLSKTLGPLLSQ 355
>gi|193215185|ref|YP_001996384.1| mammalian cell entry related domain-containing protein
[Chloroherpeton thalassium ATCC 35110]
gi|193088662|gb|ACF13937.1| Mammalian cell entry related domain protein [Chloroherpeton
thalassium ATCC 35110]
Length = 295
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 75/247 (30%), Gaps = 5/247 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
+ +V GL S V NG+ G++ L + A+ + PD +Y TA + +
Sbjct: 38 LFSNVSGLEIGSPVTINGVKKGKVEALQILGSN---VNAQISLAPDVTVYRDATARLLMR 94
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
L IEL + + I P + Y + + D +
Sbjct: 95 ELMTGKKIELEPGTPASGELPPGDLIQG--LFIADIPELVGYAGEAIDTLRILVGDMRQT 152
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ I I + LA++ T + +T +
Sbjct: 153 LHNANMIIGDQALQEDLKITIKNIRLASSDLVQISRDMRTVDIKGIAQKVDTTLVNINEF 212
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+S + ++ V L + + + ++ + + KID +
Sbjct: 213 SSRLEPELTQTVKHVQGTLTHADTLIESLQDLTSRLSTDKQTLAGKILNDPKFMAKIDSV 272
Query: 285 LSDFSSK 291
++D S
Sbjct: 273 VTDLDSL 279
>gi|304386851|ref|ZP_07369115.1| paraquat-inducible protein B [Neisseria meningitidis ATCC 13091]
gi|304339105|gb|EFM05195.1| paraquat-inducible protein B [Neisseria meningitidis ATCC 13091]
Length = 546
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/388 (9%), Positives = 99/388 (25%), Gaps = 32/388 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + A + + + +
Sbjct: 297 FFKQSVRGLSAG-------------------SPVEYKGLNVGVVSDVPYFDRNDSLHLFE 337
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ + + + Q T + T ++
Sbjct: 338 NGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQ 397
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
S + D+ R ++ ++ S LN S +
Sbjct: 398 PSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLADLLDKFNKLPLDKTVSGLNASLAELK 457
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ IN +S + ++ + + + R T + ++ D+QN
Sbjct: 458 STLKSINTLSNNPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 505
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 506 TLQSLDKTLKDVQPVINTLKEKPNALIF 533
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/458 (9%), Positives = 117/458 (25%), Gaps = 38/458 (8%)
Query: 4 KNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
+ T + + ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTLLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLSAGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + ++ + + +L+ T+ + NN
Sbjct: 432 DLLDKFNKLPLDKTVSGLNASLAELKSTLKSINTLSNN 469
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 34/261 (13%), Positives = 75/261 (28%), Gaps = 24/261 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GLS S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLSAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + + + +
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLADLLDKFNKLPLDKTVSGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T +I L + +L + + L + V NT+ +
Sbjct: 451 ASLAELKSTLKSINTLSNNPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDVQNTLQSL 510
Query: 268 RETTQTFQEVGQKIDHLLSDF 288
+T + Q V + +
Sbjct: 511 DKTLKDVQPVINTLKEKPNAL 531
>gi|120404934|ref|YP_954763.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957752|gb|ABM14757.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 410
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/255 (10%), Positives = 74/255 (29%), Gaps = 13/255 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
GL T ++V +G P GR+ + LD L + + + + T A
Sbjct: 42 YSAYF-ADAGGLFTGATVEVSGYPAGRVSDIELDG---AAVLVRFTVDKNITMGELTEAG 97
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
I+T+ L G I + ++ T S + +
Sbjct: 98 IKTKSLLGTK---------MLAVIPHGGGRLDGPIPMSRTVSPYQLPDALGDLADTISGL 148
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + + T + +A +++ + +
Sbjct: 149 DTDQLSDSLSTVSEAFAHTPEELRDAVQGVARFAQTLNERDAQLRKLLDDAAKATGVLAH 208
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ L ++ + + N ++ Q+ + + R+ + +
Sbjct: 209 RSDQVARLISDTNALLAQLRTQSDAVNQIWVNISAAAQQLKGFIAENRQQLRPALDKLNG 268
Query: 281 IDHLLSDFSSKMKSK 295
+ ++ + +++
Sbjct: 269 VLAIVDNRKERLQEA 283
>gi|326383823|ref|ZP_08205508.1| mammalian cell entry related domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
gi|326197587|gb|EGD54776.1| mammalian cell entry related domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
Length = 431
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 7/113 (6%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
SK Y G ++ + F+++ + RS +V +P S ++T + VRF+G
Sbjct: 8 SKAKYMMRGA--IAGVLILAFALWMVGRSTGVLDHDPQVYAEVPVSAGLIATGAPVRFHG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE 113
+ VG + + S + + + S TA I + G Y++
Sbjct: 66 VKVGEVSEIDP---GTTSSRVEMTVDEAALGQIPRSVTARILPRTFFGDIYVQ 115
>gi|296166437|ref|ZP_06848869.1| virulence factor Mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898198|gb|EFG77772.1| virulence factor Mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 404
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/162 (18%), Positives = 58/162 (35%), Gaps = 14/162 (8%)
Query: 1 MESKNY-----YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--S 53
ME + Y +VGL + + S+ +L ++ GL
Sbjct: 1 MERRRLRRGPPYKTVGLVTLV-ITGLVGSLLYLQFRGDLTPATKLTMVAAR---AGLMMD 56
Query: 54 TDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
S V +NG+ +GR+ + + ++ + I P + + A I+ + G
Sbjct: 57 PGSKVTYNGVQIGRVASISEISRDGKPAAKVVLAITPRYVKTIPANVAAAIKATTVFGNK 116
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
Y+ LS+ +T + A+ T + I+ AE
Sbjct: 117 YVALSSPPAPAGHSITPSTVIDATAVTTEFNTVFETLIAIAE 158
>gi|239945579|ref|ZP_04697516.1| putative Mce family protein [Streptomyces roseosporus NRRL 15998]
gi|239992046|ref|ZP_04712710.1| putative Mce family protein [Streptomyces roseosporus NRRL 11379]
gi|291449034|ref|ZP_06588424.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291351981|gb|EFE78885.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 403
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/278 (11%), Positives = 84/278 (30%), Gaps = 3/278 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L EV G V L+ SSV+ N + VGR+ + L + +
Sbjct: 47 LPGGADLGDRPYEVTAEF-GDVLSLAPQSSVKVNDVSVGRVTKIALAPNG-WRARVTMQV 104
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
L + A + L G +I+L+ + + R + P F
Sbjct: 105 NGKVKLPANAYARLEQSSLLGEKFIQLAPPPEGTAHGTLASGGRIPVSRTNRNPEVEEVF 164
Query: 148 IS-NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + ++ ++ + + + + + T++ + + +
Sbjct: 165 GALSLLLNGGGVNQLKTITTELNKALAGQEPQIRSVLNRVDTLVTDLDENKGDITQALDG 224
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + T + + + ++ +L ++ + D + + D
Sbjct: 225 VNRLATTLATRKQDVGTVLTGLSPGLKVLEKQRGSLLTMLRSLDTLSTVAVDTINRSKAD 284
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + + + D + ++ T F + +
Sbjct: 285 MIADLKALAPTLKALADSGQDLPNSLQVLLTYPFTDEV 322
>gi|319951378|ref|ZP_08025203.1| Mce family protein [Dietzia cinnamea P4]
gi|319434975|gb|EFV90270.1| Mce family protein [Dietzia cinnamea P4]
Length = 421
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/317 (10%), Positives = 81/317 (25%), Gaps = 9/317 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ I S G+ D +VR G+ VGRI + S + D +
Sbjct: 30 TGRTKTITAFFESTRGVYEDDTVRVLGVRVGRITDIT---TEDGLSKVTMKVDRDVEIPA 86
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
A + Q L +++L+ + + T +R + G+ +
Sbjct: 87 DANALLVAQSLVAERFVQLTPAFTGGEEMADGGTIPVERTAVPVEWDGVKEQLMKLSTAL 146
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI-----DKMMHTTQVTPHS 210
+ + + + I + + T +
Sbjct: 147 SPAAGEQTGPLGEFVESADAMFDGNGAEIRDALSEVSQTMSILSDGRENLFTTLKNLQLF 206
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + + + + I ++ + + + N V
Sbjct: 207 VTALSQSEEQIVSFGGRLASVSQVLGDQTGDIDAALRDLDLAVMDINRFLENHGDRVTTA 266
Query: 271 TQTFQEVGQKIDHLLSDFSS-KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ + ++ A NI + + + A+ ++ + I
Sbjct: 267 VDKLGRATEVVRDRRAELEGVLHVGPTAMANFYNIYRPYQGVLNGVLAMNQMANPTNFIC 326
Query: 330 STINTIENITSNLNDSS 346
I + N + +
Sbjct: 327 GAIAGLANNRAESDAQL 343
>gi|256828143|ref|YP_003156871.1| Mammalian cell entry related domain protein [Desulfomicrobium
baculatum DSM 4028]
gi|256577319|gb|ACU88455.1| Mammalian cell entry related domain protein [Desulfomicrobium
baculatum DSM 4028]
Length = 552
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/390 (7%), Positives = 97/390 (24%), Gaps = 27/390 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LS V + I VG++V + + +T + ++
Sbjct: 176 LSIGMPVYYRQIQVGQVVSFGFAPDGQAIDVQIFIEAPHHAKVTQNTRFWNASGVDVSLS 235
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
L + +I A + + + I + ++K
Sbjct: 236 AEGLKVDTQSLISIVSGALAFDVPEGAEPGGDVDEDHVFSLYQDFDSIHEQLYTVRKNWL 295
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + L +
Sbjct: 296 IYFDQSVRGLSIGAPVEVYGIKIGEVAKIDLIYDTTRKEMRVPVIVSIEPERIANILTAV 355
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
++ + ++ +++ ++ + ++ L +
Sbjct: 356 PNLESMKGEPVLKWFVEE----------------RNMKAQLKSGNLLTGQMLVDLGFYPQ 399
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ K+ + S I + + + N+ S L +++
Sbjct: 400 EPKAVMGYENGFAVIPSVPGSLDQIQDSIAKITRNLEKVPLEKIGNNLDSLLKETTGAIR 459
Query: 351 ELMSKINNISALKE--NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
E+ + + Q + + T E++ + + + +
Sbjct: 460 EITVAVKEAGGFARSLTSETSPLLQSNLIALQKTLEELQKTLGQ--------DSALNYNA 511
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ + +L T+ + +R+PQ ++
Sbjct: 512 KKTLEELTLTLRAMRELSGAIDRHPQSFLF 541
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN---HSLAKALIRPD 90
I SV GLS + V GI +G + + L + I P+
Sbjct: 296 IYFDQSVRGLSIGAPVEVYGIKIGEVAKIDLIYDTTRKEMRVPVIVSIEPE 346
>gi|149918246|ref|ZP_01906738.1| hypothetical protein PPSIR1_11575 [Plesiocystis pacifica SIR-1]
gi|149821006|gb|EDM80413.1| hypothetical protein PPSIR1_11575 [Plesiocystis pacifica SIR-1]
Length = 505
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 41/424 (9%), Positives = 106/424 (25%), Gaps = 30/424 (7%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ V LF + + S+ ++ S + + ++ V+ G
Sbjct: 8 RRVNALVALFALVMGGVMAVSMVVIASSEGLWRSKTHLHADF-RDAGSIGKNTRVQLAGK 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+GR++ + + T+ +
Sbjct: 67 EIGRVLDVAF-------------------VTERYPCDPNTEDWGRPGHGRSDDCEPWLFC 107
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+QRA + E S + D + T
Sbjct: 108 APVGRLSVDQRAGLEEATVQQGGVCGELEEFSGRSEDYEGCQGPNTCGPGRLCVTQAFRQ 167
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
S + D + + +
Sbjct: 168 RYRGV-------RWWGQDGWCVDFEVESQRIRVSMEVDDDSLQYMREDSRASVVLNGPLS 220
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
S + + + T+ + +ID + +D +
Sbjct: 221 SPRVNISVGARGAEVVPGDRIQTKASLTEEALGLKDQIDRIAADIERGLIGLSALTDALT 280
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ +++ S + I+ Q + + + + N + ++ SQ E+ ++ A
Sbjct: 281 DEKAQADIESMRENLAAISTQMETAMGMVGAVLNDPTTRSELSQTLREVRQAASD--AQG 338
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ-NFSQSGLNDIQNLVRKLQETVNHF 422
E SL +R + + ++++N + + + + D L ++
Sbjct: 339 EYESLEGRVKRTIRGVQRAADEVNAVVEGLDDPANTSLVAVMTQDHHGLDDSATRLSDNV 398
Query: 423 DDCL 426
+D L
Sbjct: 399 EDAL 402
>gi|271500191|ref|YP_003333216.1| mammalian cell entry related domain-containing protein [Dickeya
dadantii Ech586]
gi|270343746|gb|ACZ76511.1| Mammalian cell entry related domain protein [Dickeya dadantii
Ech586]
Length = 548
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/401 (9%), Positives = 108/401 (26%), Gaps = 28/401 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGIT 110
LS V F G VG + D ++ P D + + + ++
Sbjct: 171 LSAGDPVLFRGYRVGSVETSHFDPAARKMQYQLFVVSPYDQLVTSNVRFWKDSGVALNLS 230
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ T+ P+G + E ++ D+ IQ +
Sbjct: 231 AQGMRVEMGSLSTLLSGGV-------SFDVPTGWDIGNPAHERDEYQLFDNQNSIQDSLY 283
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
K A ++ T+V + F++ + +
Sbjct: 284 TEYKEYLLFFDESVRGLQAGAPVEFRGIRLGTVTEVPFFPRNMSQRFDSDYRIPVLVRIE 343
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ +QI + S + T + + + + ++ +
Sbjct: 344 PGRLKPGLRDQINLEQE-LSKGADSGLRASMKTANLLTGALYVDLDFYPQQKGRMTSLAQ 402
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + S + + + + + ++
Sbjct: 403 VDGYPVLPTVNGGLTQIQQKLMSVLD-----KINGLPLNPMVEQATKTLTESQSTLRELQ 457
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ ++ +N +++ + L D QR + + + + P+ + +
Sbjct: 458 KTLASLNKLTSSEAMQQLPADMQRTLRELNSSLQGVQPGSPAYNRMVVD----------- 506
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L +T+ L +++ E + +PK
Sbjct: 507 -MQRLDQTLRELQPLLRTLNDKSNALIF--EAPGARDPQPK 544
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/260 (10%), Positives = 72/260 (27%), Gaps = 12/260 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + E ++ SV GL + V F GI +G + + +
Sbjct: 277 SIQDSLYTEYKEYLLFFDESVRGLQAGAPVEFRGIRLGTVTEVPFFPRNMSQRFDSDYRI 336
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I P L P I + + + A +
Sbjct: 337 PVLVRIEPG-RLKPGLRDQINLEQELSKGADSGLRASMKTANLLTGALYVDLDFYPQQK- 394
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
G ++ + + + Q + + + + ++ +
Sbjct: 395 -GRMTSLAQVDGYPVLPTVNGGLTQIQQKLMSVLDKINGLPLNPMVEQATKTLTESQSTL 453
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
Q T S + + + L + + ++ + Q ++ + N V ++
Sbjct: 454 RELQKTLASLNKLTSSEAMQQLPADMQRTLREL--NSSLQGVQPGSPAYNRMVVDMQRLD 511
Query: 262 NTVHDVRETTQTFQEVGQKI 281
T+ +++ +T + +
Sbjct: 512 QTLRELQPLLRTLNDKSNAL 531
>gi|188579087|ref|YP_001916016.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188523539|gb|ACD61484.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 183
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 36 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVSDISLDPTKFDSI-VTLSLDTRYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|296117335|ref|ZP_06835925.1| paraquat-inducible protein B [Gluconacetobacter hansenii ATCC
23769]
gi|295976101|gb|EFG82889.1| paraquat-inducible protein B [Gluconacetobacter hansenii ATCC
23769]
Length = 318
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/310 (10%), Positives = 70/310 (22%), Gaps = 4/310 (1%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T +G V+ F + PM E ++ S GL S V F GIP
Sbjct: 3 ARQTVIGALVLGA-AFVGGISLLARGDIPFLHPMREAVVVFEDSTAGLDVGSPVNFRGIP 61
Query: 65 VGRIVGLFLDQE---YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + + + + ++ K P + I T G+ +
Sbjct: 62 VGAVQNIEITVKPQIKRTYTFVKIGFSPRQVPGGADLPDIPTLVADGMRADMVLHSFVTG 121
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
++ + N A + I + T +++ + T
Sbjct: 122 QSEIDLDFSPNTPARLHQDIPASLPEIPVGQTTLQQLKGELGAPTMEKLQHDIRTTVASI 181
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + + + +
Sbjct: 182 RQLATDLHRDVPPMIDSIRQTSAHSHVAVVSIRTALADAQARAAVTLTDMDRMMATGGRE 241
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + ++ + + Q HL +
Sbjct: 242 MDARREELRQLIAQARLTLTQAHETMVGVQQLTSPQSPDQVHLADMTRDVTAAAYGLRGF 301
Query: 302 ENIADSTSNM 311
N +S +
Sbjct: 302 ANEVESNPQL 311
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 66/194 (34%), Gaps = 4/194 (2%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ S + D+ + + L + + K +A
Sbjct: 126 DLDFSPNTPARLHQDIPASLPEIPVGQTTLQQLKGELGAPTMEKLQHDIRTTVASIRQLA 185
Query: 312 RSSISAIREITDQRQKIISTIN-TIENITSNLNDSSQKFAELMSKINNISALK--ENNSL 368
+ + D ++ + + + +I + L D+ + A ++ ++ + A E ++
Sbjct: 186 TDLHRDVPPMIDSIRQTSAHSHVAVVSIRTALADAQARAAVTLTDMDRMMATGGREMDAR 245
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
++ ++ + R T + + + + S + + ++ R + N
Sbjct: 246 REELRQLIAQARLTLTQAHETMVGVQQLTSPQSPDQV-HLADMTRDVTAAAYGLRGFANE 304
Query: 429 FERNPQDIVWGREK 442
E NPQ ++ GR +
Sbjct: 305 VESNPQLLLMGRSQ 318
>gi|126436755|ref|YP_001072446.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236555|gb|ABN99955.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 482
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 42/112 (37%), Gaps = 5/112 (4%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
F LS G V +++P S GL +V + G VGR+V + +
Sbjct: 27 FGYIKLSNLVPGVGQ-YTVTVQLPES-GGLYKSGNVTYRGSEVGRVVDVRVAGTG---VE 81
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A+ ++ D + A + +Q G Y+ L + + Q +R
Sbjct: 82 AELSLKSDIEIPSDLDAEVHSQSAIGEQYVALLPRDGNARPLRQGDVIPRER 133
>gi|78050008|ref|YP_366183.1| ABC transporter substrate-binding protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|325927587|ref|ZP_08188819.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas perforans
91-118]
gi|78038438|emb|CAJ26183.1| ABC transporter substrate-binding protein [Xanthomonas campestris
pv. vesicatoria str. 85-10]
gi|325542052|gb|EGD13562.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Xanthomonas perforans
91-118]
Length = 181
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 36 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVSNISLDPTKFDSI-VTLSLDTKYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 94 DLPADTSAGIFTSGLLGESYIGLQPG 119
>gi|294627464|ref|ZP_06706048.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292598285|gb|EFF42438.1| toluene tolerance protein [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 179
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 34 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVADISLDPTKFDSI-VTLALDTKYK 91
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 92 DLPADTSAGIFTSGLLGESYIGLQPG 117
>gi|162146510|ref|YP_001600969.1| paraquat-inducible protein B [Gluconacetobacter diazotrophicus PAl
5]
gi|209543491|ref|YP_002275720.1| Mammalian cell entry related domain-containing protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|161785085|emb|CAP54629.1| Paraquat-inducible protein B [Gluconacetobacter diazotrophicus PAl
5]
gi|209531168|gb|ACI51105.1| Mammalian cell entry related domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 561
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/265 (11%), Positives = 75/265 (28%), Gaps = 5/265 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPDTP 92
+ + SV GL+ + V GI VG + + LD + I+P+
Sbjct: 297 RERLSLATYLTNSVSGLAVGAQVTMFGIQVGTVTSVKLDLDQKAGTARVRVGMEIQPERI 356
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
L + ++ + + ATP+ + +
Sbjct: 357 LPTDQIHHDTMAATVQALVDNGLRASVDTASLLTGESVIGLNFVKNATPAMVQAEGTTLI 416
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+K S + ++ +LA++ + I+ +
Sbjct: 417 IPNKAGGISGIMDSLSTVADKIAAMPLTQVGVNLNNLLAHSDARINSPEVRQAIVALRDS 476
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ D + + + + + L+ ++N + S + D+++
Sbjct: 477 LHSIQGLAGDARSGMHPLFQRLPQMSKQ--LDGTLKNANVLMASYGGDTDFHRDLQQMVV 534
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKET 297
E + + L + + T
Sbjct: 535 QLNEAARSLRFLTDFLNRHPSALIT 559
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 50/408 (12%), Positives = 115/408 (28%), Gaps = 17/408 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP--DTPL 93
G +I GS+ + V F I VG ++G + L + IR D+ L
Sbjct: 168 GNTYTLISPSLGSIG---QGAPVFFRDIDVGEVLGYTMPPGGVGPILIQVFIRAPYDSYL 224
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T + G L + + +F P S
Sbjct: 225 RTDTRFWNVSGVQVGFGAGGLKVKLQSIQALFSGGVAFGLAPQRVDQPVPSAPRNSVFRL 284
Query: 154 T-SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
S++ +D++ + +++ + + + T+ + + + ++
Sbjct: 285 YESQEAADNAGYRERLSLATYLTNSVSGLAVGAQVTMFGIQVGTVTSVKLDLDQKAGTAR 344
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + I D++ V +++N +S + + +
Sbjct: 345 VRVGMEIQPERILPTDQIHHDTMAATVQALVDNGLRASVDTASLLTGESVIGLNFVKNAT 404
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ ++ + + + S + + + +
Sbjct: 405 PAMVQAEGTTLIIPNKAGGISGIMDSLSTVADKIAAMPLTQVGVNLNNLL-AHSDARINS 463
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ L DS L A + LF+ + T + N + S
Sbjct: 464 PEVRQAIVALRDSLHSIQGLAGD-----ARSGMHPLFQRLPQMSKQLDGTLKNANVLMAS 518
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
G + D+Q +V +L E + R+P ++ GR
Sbjct: 519 YGGDTD-----FHRDLQQMVVQLNEAARSLRFLTDFLNRHPSALITGR 561
>gi|54027079|ref|YP_121321.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018587|dbj|BAD59957.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 336
Score = 64.6 bits (154), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 86/280 (30%), Gaps = 8/280 (2%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ + G + GL + VR G+ VG + + L + L
Sbjct: 28 MSAFFVDRLPFIGAGVKYTAEFSE-AAGLKKGNEVRVAGVKVGSVADVRLAGD---RVLV 83
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
DT + TTA+I+ + + G Y+ L E + +
Sbjct: 84 DFR-TSDTWIGNETTASIQIKTVLGQKYLALDPRGSEPLDPGTRIPLSRTVSPYDVIDAF 142
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ + + + +++ S R + + E + +I I +S LA + ++
Sbjct: 143 SDAAKTIDQIDTAQLATSMRVLSEAFETTPPEIRGSIDGIARLSETLAKRDEELKRLFSA 202
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
T+ T +N I Q ++Q+L + + V +
Sbjct: 203 TRQTTEVLAERNAEFERLLANGGQLLTELNIRQQAIHQLLTGARTVAAELSAL---VADN 259
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + + ++ ++ S ++ L
Sbjct: 260 EAQIGPALTNLRGAIEMLNDNQANISKTLELAAPFYGLYA 299
>gi|49089200|gb|AAT51655.1| PA4454 [synthetic construct]
Length = 158
Score = 64.6 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ L +S + + + ++ G++ V
Sbjct: 1 MQTRTLEIGVGLFLLAGLLALLLLALRVSGLSVGNAGDTYKVYAYFDNIAGVTVRGKVTL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD++ I + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAVDLDRDSYTG-RVTMEINQNVNNLPVDSTASILTAGLLGEKYIGISVG 117
>gi|58039755|ref|YP_191719.1| paraquat-inducible protein B [Gluconobacter oxydans 621H]
gi|58002169|gb|AAW61063.1| Paraquat-inducible protein B [Gluconobacter oxydans 621H]
Length = 560
Score = 64.6 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/406 (9%), Positives = 105/406 (25%), Gaps = 36/406 (8%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
S+ L S V F + VG + + P I Q
Sbjct: 176 SLGSLGPGSPVFFRDLQVGEV--------------------LGYTMPPGGKGPIVIQAFV 215
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
Y + + + S F + +
Sbjct: 216 KEPYDHYLRTDSRFWNVSGVQVGLGAGGLKVQLKSLQALFSGGIAFGLPERRRNIDLPDA 275
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ K + +++I+ + + T+TD+ L
Sbjct: 276 PANSVFKLYASEADADNARYHKRLRVVTYINSSVKGLTNGSQVTMFGLQIGTVTDVRLLL 335
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ K ++ ++ + +N+ + + + +
Sbjct: 336 EGPTKLPRVRVDMEL--EPERMLSNWDDRIENSKEPPVEKYLQAFVADGMRASVQSASFL 393
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
M + + A + + + + D + +STI L +
Sbjct: 394 TGESMIALQFVKNAPVTALTYEGDVAVLPSQAGGMDGIMESVSTITDKI-AAMPLTEIGG 452
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL-- 405
+L++ + E + ++ ++ N+ +P++ LQ +
Sbjct: 453 HVNDLLAHADGRLNSPEVTQSLAALRDSLQNLSRLTKTANQNLPALMKGLQGTLANAQSV 512
Query: 406 -----------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+QN++ +L + + + +P ++ GR
Sbjct: 513 LGAYGGDTDFHRSLQNMITQLTQMSRSLRFLTDYLDHHPSALITGR 558
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/261 (11%), Positives = 76/261 (29%), Gaps = 6/261 (2%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN---HSLAKALIRPDTPLYPS 96
V+ I SV GL+ S V G+ +G + + L E P + P+ L
Sbjct: 300 RVVTYINSSVKGLTNGSQVTMFGLQIGTVTDVRLLLEGPTKLPRVRVDMELEPERMLSNW 359
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
++ Y++ + ++ + + + E
Sbjct: 360 DDRIENSKEPPVEKYLQAFVADGMRASVQSASFLTGESMIALQFVKNAPVTALTYEGDVA 419
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + + I+E++ A T N++ + S +
Sbjct: 420 VLPSQAGGMDGIMESVSTITDKIAAMPLTEIGGHVNDLLAHADGRLNSPEVTQSLAALRD 479
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVS---SNNFVKSSDQVINTVHDVRETTQT 273
+T ++ + L N Q + N + + + +++
Sbjct: 480 SLQNLSRLTKTANQNLPALMKGLQGTLANAQSVLGAYGGDTDFHRSLQNMITQLTQMSRS 539
Query: 274 FQEVGQKIDHLLSDFSSKMKS 294
+ + +DH S + ++
Sbjct: 540 LRFLTDYLDHHPSALITGRRN 560
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 40/489 (8%), Positives = 128/489 (26%), Gaps = 60/489 (12%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
+ ++ + L V + + + + ++ VI + DGL+ + V+
Sbjct: 21 RRTRFSLILLIPVVAILIAGWLAW------EHFATRGPVITITFETADGLTPGQTQVKNK 74
Query: 62 GIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ +G + + L + + + + L T + + G + L TL
Sbjct: 75 AVTLGTVQDITLSDDMKHVDVTVQMNVNSAHILTDHTRFWVVRPRINGASITGLDTLFSG 134
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
++ + ++ + S + +
Sbjct: 135 AYIALDPGSDDG--HYQKFFKGLESPPGVRSDQPGETFWLVSPSLGSLGPGSPVFFRDLQ 192
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
T+ I + H + + F ++ + L + L+ +
Sbjct: 193 VGEVLGYTMPPGGKGPIVIQAFVKEPYDHYLRTDSRFWNVSGVQVGLGAGGLKVQLKSLQ 252
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-----HLLSDFSSKMKSK 295
+ + + + + + + +++ +S +K
Sbjct: 253 ALFSGGIAFGLPERRRNIDLPDAPANSVFKLYASEADADNARYHKRLRVVTYINSSVKGL 312
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK------- 348
+ + + + T + + E + SN +D +
Sbjct: 313 TNGSQVTMFGLQIGTVTDVRLLLEGPTKLPRVRVDMELEPERMLSNWDDRIENSKEPPVE 372
Query: 349 -------FAELMSKINNIS-------------------------ALKENNSLFKDAQRAM 376
+ + + + S + S M
Sbjct: 373 KYLQAFVADGMRASVQSASFLTGESMIALQFVKNAPVTALTYEGDVAVLPSQAGGMDGIM 432
Query: 377 HTFRDTSEKINRY-IPSIGNNLQNF-----SQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ ++KI + IG ++ + + ++ + L++++ +
Sbjct: 433 ESVSTITDKIAAMPLTEIGGHVNDLLAHADGRLNSPEVTQSLAALRDSLQNLSRLTKTAN 492
Query: 431 RNPQDIVWG 439
+N ++ G
Sbjct: 493 QNLPALMKG 501
>gi|15837021|ref|NP_297709.1| toluene tolerance protein [Xylella fastidiosa 9a5c]
gi|9105259|gb|AAF83229.1|AE003893_6 toluene tolerance protein [Xylella fastidiosa 9a5c]
Length = 178
Score = 64.6 bits (154), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-L 93
G + + L + VR +G+ +G++ + LD + + L
Sbjct: 36 GGNQYTLTAHFTQ-IGQLRKQAPVRISGVNIGQVSNIALDPKTFESV-VTLSLDNQYKDL 93
Query: 94 YPSTTATIRTQGLAGITYIELSTL 117
T+A I T GL G +YI L
Sbjct: 94 PADTSANILTSGLLGESYINLLPG 117
>gi|226361223|ref|YP_002779001.1| Mce family protein [Rhodococcus opacus B4]
gi|226239708|dbj|BAH50056.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 326
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/318 (8%), Positives = 82/318 (25%), Gaps = 13/318 (4%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+ ++ ++ + ++ + + + + VR GI VG +
Sbjct: 17 GIVLLVVVALASTAVLYANPPGRASFSFRT------DDASSIDIGQDVRVAGIGVGTVTD 70
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ ++ + L A I P+ + +R G ++ + + A
Sbjct: 71 VSIEPD---AVLVTAEIDDAVPVGSDSRVEVRMLTPVGG--YAITLVPLGDLPLGDAALP 125
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
Q ++ + + +N D++ ++ + T +
Sbjct: 126 AEQVSVPYSIGDVLQAAPHTTDNVEGGTVDANLDEMARALEENPTSVASMISGLTSIARV 185
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
+ + + S + + ++ + E +
Sbjct: 186 MDQQRAQVRTIADLAAEYLQSFEADQGMVFELIRE--IDVVLSTYNTTHAGFNEAYSLLG 243
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
N + + E ID + S + + ++ +
Sbjct: 244 NVLMTIQPFEAFYLDHKTEVLDAVNHAKGVIDEFRTSMSPAIDNLQSLRTQLAEWLTPEG 303
Query: 311 MRSSISAIREITDQRQKI 328
M + +D +
Sbjct: 304 MAAIKGGTLMASDFCVPV 321
>gi|169631639|ref|YP_001705288.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243606|emb|CAM64634.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 377
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/348 (10%), Positives = 107/348 (30%), Gaps = 15/348 (4%)
Query: 3 SKNYYTSVGLF--VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ G V++++ +F Y RS++ + + SV GL D+ V
Sbjct: 9 TRRTLWIAGALAIVIAVVAGAFGWTYLRDRSHRL-----TITAQF-ESVSGLYPDNKVSV 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P+G++ + + + I + A + + +IEL+ + +
Sbjct: 63 LGMPIGKVTKIT---SRGTYMEVEFTIDSTVKVPADAKAVTVSTSILTDRHIELTPVYRG 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
T+ R TP + ++ + SK + + + + I
Sbjct: 120 GPTLKNGDIIGLDRT---KTPVEFDRVLAMIDRLSKAMKGDGKGAGPLADLINNSTNALS 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N E +++ L + +T T + ++ + V
Sbjct: 177 GNGELMTSSLDELSKALRLSADGGAMTRDQLTKIVTRLSSLFEASARNDQNIREFSSTVR 236
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK-IDHLLSDFSSKMKSKETSA 299
Q+ + + + Q+ N + + ++ ++ + + + ++ +
Sbjct: 237 QLSQVLDQEQLGSGTTGKQLNNILLQAGSLLEQNRDAIKQSVGNSSQIAQAVYDNRRELS 296
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
++ ++ +I + + + +
Sbjct: 297 EGFDLLPLMADNVYNIIDPVNNVVRAHVPADRLLFDTQAAKEICNLMG 344
>gi|108797101|ref|YP_637298.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866186|ref|YP_936138.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126432724|ref|YP_001068415.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|108767520|gb|ABG06242.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692275|gb|ABL89348.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126232524|gb|ABN95924.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 548
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/320 (9%), Positives = 83/320 (25%), Gaps = 7/320 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ Y ++ L V+ G+ VG I + +
Sbjct: 35 FAGWQLYKRLSTNTVVAYFSDTLALYPGDKVQIMGVRVGTIDKIEPAGD---KMKVTFSY 91
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
+ + TA+I L I+L+ + A R + P +
Sbjct: 92 ESKYKVPANATASILNPSLVASRTIQLAPPYTGGPVMEDDAVIPIDRTQV---PVEYDEL 148
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + + + + ++ + ++ N++S ++ +
Sbjct: 149 RDSLDRILTDLGPTPDQPKGPFGDVIESFADGLSGKGKQINTTLNSLSEALTTLNEGRGD 208
Query: 208 PHSSDSKNTFN-TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S + Q N + + ++ + T
Sbjct: 209 FFSVVKSLALFVNALYRSDQQFVALNDDLAQFTNSFTNTDRELATALQDLNELLTTTRGF 268
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ E ++ + + + + L + + N+ + S +
Sbjct: 269 LDENSEVLTKDINNLADVTNAILQPEPLDGLETGLHVLPNLGGNILNISSPVNGGIVGVP 328
Query: 327 KIISTINTIENITSNLNDSS 346
I N ++ I S++ S
Sbjct: 329 VINGMANPMQFICSSIQAGS 348
>gi|326330426|ref|ZP_08196734.1| LigA [Nocardioidaceae bacterium Broad-1]
gi|325951701|gb|EGD43733.1| LigA [Nocardioidaceae bacterium Broad-1]
Length = 433
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/358 (9%), Positives = 108/358 (30%), Gaps = 15/358 (4%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ GL V+ +L + + +++ EV + +V L + +VR
Sbjct: 10 RTRALAFKAGLIVLVVLAGIL-FVTFKAQTGMPFAKTTEVQALVS-NVHSLRANDAVRQF 67
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+GR+ + +L + D +Y + ++ L E
Sbjct: 68 SKRIGRVSSIDYQ---DGAALVTMELDGDVDVYRDAHVELWDLSALATKFVALDPGTPES 124
Query: 122 KTIFQIATERNQRAM----ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
I +Q S A +T + + K I+++
Sbjct: 125 GEIGDEPIPASQTDDSADVYQLLDVLDPKTRSAATSTLRALGGGVAGHAKDIQHLLAAAP 184
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTP-HSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ ++ +S LA + + ++ + ++ + D +
Sbjct: 185 DLLGDLGAVSAALAAPETDLVGLLDNVETVSGRLRGRESEMRQLMDRSQETLAAVSVDSG 244
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS-----SK 291
+ + + ++ + + + ++ + + D ++ + + D S
Sbjct: 245 EPLRRTVDQLPQTLEHTERAMSSLQTPLADTGHAMRSLRPGADALGRSEGDLRGFLRESV 304
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+K+ + + ++ +++ R + ++ ++ + + +
Sbjct: 305 PVAKKVPPVAKAAIPAVEDLTQTVADARPLAPMVRQALADLKVPLGVLAPYAPEMATL 362
>gi|285016850|ref|YP_003374561.1| ABC transporter substrate-binding protein precursor [Xanthomonas
albilineans GPE PC73]
gi|283472068|emb|CBA14575.1| putative abc transporter substrate-binding protein precursor
[Xanthomonas albilineans]
Length = 180
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ G +I R + L + V+ G+ +G++ + LD + I
Sbjct: 36 GFGGDRYALIARFSQ-IGQLRAQAPVKIGGVIIGQVAKIDLDPTKFDSV-VTLSIDGKYK 93
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +Y+ L
Sbjct: 94 DLPADTSAAILTSGLLGESYVGLQPG 119
>gi|289642559|ref|ZP_06474702.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
gi|289507647|gb|EFD28603.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
Length = 429
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/131 (13%), Positives = 40/131 (30%), Gaps = 5/131 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ G FVV + + + +++ P G++ L + VR
Sbjct: 9 RTRSFRAG-FVVLAILAVVLYLTFKAQTGLPFAPTTTASASF-GNIHSLRVNDDVREMSK 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+GR+ + +L + + +Y A I ++EL +
Sbjct: 67 RIGRVSKIDYV---NGVALVTMELDGNVKVYQDAHAEIWDVSALASKFVELDRGTQRAGE 123
Query: 124 IFQIATERNQR 134
+ E +
Sbjct: 124 LGGRTIEATRN 134
>gi|120405556|ref|YP_955385.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958374|gb|ABM15379.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 482
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 40/123 (32%), Gaps = 7/123 (5%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
IL WL+ S + A + + GL T + V+ G+ VGR+ +
Sbjct: 15 LILVILTVVALWLTYSLFFGTFRAHETVTLTSERSGLVMETGAKVKLRGVQVGRVSAIQ- 73
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
K I D + + IR + G +++L K +
Sbjct: 74 --GGSQPVALKLEIDKDKIKFIPANIEGQIRATTVFGAKFVDLVYPEDPKGQLQAGQVIE 131
Query: 132 NQR 134
++
Sbjct: 132 SRN 134
>gi|225619148|ref|YP_002720374.1| Ttg2C, ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Brachyspira
hyodysenteriae WA1]
gi|225213967|gb|ACN82701.1| Ttg2C, ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Brachyspira
hyodysenteriae WA1]
Length = 260
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 26/133 (19%), Positives = 48/133 (36%), Gaps = 11/133 (8%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSN-QYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M++K +G+F + +I L + + DG V G L + V
Sbjct: 1 MKNK---IKLGIFFIVTFVIFVGAIVLLGKIKVRGDGYRIYVDYVFIGD---LQENGKVS 54
Query: 60 FN--GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA-GITYIELST 116
+ GI +G I + ++ + + + T +I+T GL G YI +S
Sbjct: 55 YRGGGIQIGFIEKIAINPDGTIRVTLFIT-DKNVIIPDGTKFSIQTVGLGLGEKYIMVSP 113
Query: 117 LRKEKKTIFQIAT 129
+ +A
Sbjct: 114 PAINTTGMKSMAP 126
>gi|58579931|ref|YP_198947.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae KACC10331]
gi|58424525|gb|AAW73562.1| toluene tolerance protein [Xanthomonas oryzae pv. oryzae KACC10331]
Length = 188
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 32/86 (37%), Gaps = 3/86 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + R + L + V+ G+ +G++ + LD + +
Sbjct: 41 GFGSSQYTLTARFSQ-IGQLRAQAPVKIGGVTIGKVSDISLDPTKFDSI-VTLSLDTRYK 98
Query: 93 -LYPSTTATIRTQGLAGITYIELSTL 117
L T+A I T GL G +YI L
Sbjct: 99 DLPADTSAGIFTSGLLGESYIGLQPG 124
>gi|145222689|ref|YP_001133367.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315443153|ref|YP_004076032.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|145215175|gb|ABP44579.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315261456|gb|ADT98197.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 488
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 4/100 (4%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
IL F +++ + + V + + GL T++ V+ G+ VGR+ + +
Sbjct: 13 LILVAVFAVAIFVTYALFTGSLKSTVPVTLTSDRAGLVMETNAKVKLRGVQVGRVSDISV 72
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ I PD + + A IR + G +
Sbjct: 73 TGRQDPTVALQLEIDPDQVQYIPANVEAQIRATTIFGAKF 112
>gi|329113588|ref|ZP_08242368.1| Paraquat-inducible protein B [Acetobacter pomorum DM001]
gi|326697110|gb|EGE48771.1| Paraquat-inducible protein B [Acetobacter pomorum DM001]
Length = 578
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/422 (10%), Positives = 118/422 (27%), Gaps = 32/422 (7%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ + G++ + + V F + VG ++G + + + +R
Sbjct: 176 GVRSDQPGRIYTLVAGNIGSIGQGAPVFFRDVDVGEVLGYTMPPGGRGPVMIQIFVRE-- 233
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
++ K + + + P + +
Sbjct: 234 --PYDHYLNTNSRFWNVSGVKVGFGAGGLKVQLQSLQALFSGGVAFGLPPVAESRMHPAS 291
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
E + + + A + +S + + +QVT
Sbjct: 292 EAPANTVFKLYDTHEDADN----------AGYRERVPLATYVMSSVKGLDVGSQVTMFGI 341
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
N + DL ++ I ++ + + + NN + + + T
Sbjct: 342 QVGNVTSVKLDLSSNPGHPRVRIGMEVQPERVLSSAELRNNNLTDMFRTLVANGLRASTD 401
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
G+ + L + + I M + ++ IT +
Sbjct: 402 SVSFLTGEGMISLNFIKNPAPATTSMEGTTLVIPSQAGGMGGIMDSLSTITSR-----LA 456
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
E I +N N+ + + + +L + ++ Q R+ +++ +P
Sbjct: 457 AMPFEQIGTNANNLLAHADQTLVSPDVKQSLVGLRNSMQNLQALTKDLRNGMAPLSKRLP 516
Query: 392 SIGNNLQNFSQSGL-------------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ L Q+ ++Q++V +L +T + +P ++
Sbjct: 517 EMAQQLDQTLQNANRLLASYGGNSDFHRNLQSMVVQLGQTARSLRFLSDFLTNHPSALLS 576
Query: 439 GR 440
GR
Sbjct: 577 GR 578
>gi|118470654|ref|YP_890123.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118171941|gb|ABK72837.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 454
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/269 (10%), Positives = 76/269 (28%), Gaps = 15/269 (5%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ + + + GL VR G+PVG I + + +
Sbjct: 28 VGIYQVWPSRGGLKLTAYFTNAVGLYPGDQVRVVGVPVGTIDSIEPRPSD---VKIEMTL 84
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
+ A I L +I+L+ E + + R + +
Sbjct: 85 DRGVKVPADAKALIIAPNLVAARFIQLTPAYTEGDEMADGTSIGLDRTAVPVEWDQVKEQ 144
Query: 148 ISNAENTS------------KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
++ + + ++ ++ ++ L + +
Sbjct: 145 LTQLSSQLGPQEGSVQGPLAQVVNQAADTFDGNGDSFRNALRELSQTAGRLGDSRTDLFG 204
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ + +S++ F ++ + ++ + + + +
Sbjct: 205 TVRNLQILVDALSNSNEQIVQFTNHVASVSQVLADSANGLDSTLDTLNQALSDVRGFLNE 264
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHL 284
S+D +I V + + TQ + + I+ L
Sbjct: 265 SNDSLIAQVGKLADFTQILTDHSEDIEQL 293
>gi|15599650|ref|NP_253144.1| hypothetical protein PA4454 [Pseudomonas aeruginosa PAO1]
gi|107099961|ref|ZP_01363879.1| hypothetical protein PaerPA_01000982 [Pseudomonas aeruginosa PACS2]
gi|116052486|ref|YP_792799.1| hypothetical protein PA14_57850 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152983904|ref|YP_001350362.1| hypothetical protein PSPA7_5026 [Pseudomonas aeruginosa PA7]
gi|254238884|ref|ZP_04932207.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|254244733|ref|ZP_04938055.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|296391164|ref|ZP_06880639.1| hypothetical protein PaerPAb_23549 [Pseudomonas aeruginosa PAb1]
gi|313107039|ref|ZP_07793242.1| hypothetical protein PA39016_000840141 [Pseudomonas aeruginosa
39016]
gi|9950689|gb|AAG07842.1|AE004859_11 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
gi|115587707|gb|ABJ13722.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170815|gb|EAZ56326.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
gi|126198111|gb|EAZ62174.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
gi|150959062|gb|ABR81087.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
gi|310879744|gb|EFQ38338.1| hypothetical protein PA39016_000840141 [Pseudomonas aeruginosa
39016]
Length = 157
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ L +S + + + ++ G++ V
Sbjct: 1 MQTRTLEIGVGLFLLAGLLALLLLALRVSGLSVGNAGDTYKVYAYFDNIAGVTVRGKVTL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD++ I + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAVDLDRDSYTG-RVTMEINQNVNNLPVDSTASILTAGLLGEKYIGISVG 117
>gi|15677520|ref|NP_274676.1| pqiB protein [Neisseria meningitidis MC58]
gi|218768691|ref|YP_002343203.1| hypothetical integral membrane protein [Neisseria meningitidis
Z2491]
gi|7226924|gb|AAF42020.1| pqiB protein [Neisseria meningitidis MC58]
gi|121052699|emb|CAM09042.1| hypothetical integral membrane protein [Neisseria meningitidis
Z2491]
gi|325134795|gb|EGC57432.1| paraquat-inducible protein B [Neisseria meningitidis M13399]
gi|325140866|gb|EGC63376.1| paraquat-inducible protein B [Neisseria meningitidis CU385]
Length = 553
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + A + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/461 (9%), Positives = 122/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 432 DLLDKFDKLPLDKTVAELNGSLAELKSTLKSANAALSSIDK 472
>gi|226308243|ref|YP_002768203.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226187360|dbj|BAH35464.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 416
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/420 (10%), Positives = 126/420 (30%), Gaps = 45/420 (10%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ ++ N V + S G+ T++ V + G+PVGR+ + L +
Sbjct: 22 LIYVGAKYVRLDNLLGFGQYTVKTELATS-GGIFTNAEVTYRGVPVGRVGDMSLTSDG-- 78
Query: 80 HSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
LI P + S A + + G Y++L + + + T
Sbjct: 79 -IEVDLLIDSSAPQIPASARAVVANRSAIGEQYVDLQPDTDQGPFLEDGSVIAVGDT-TT 136
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
P +N S + +++ +++S + + + +
Sbjct: 137 PIPIENVLTSANGLVHSVPVDALHTVAKELGAAFNGKGEDLQVLADSLSGISQSGLDTLP 196
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ + + + +++ ++ + S + +
Sbjct: 197 QTLGLIRDSQTVLTTQSDQSSAI-------------------------KQFSTDLDALTA 231
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
Q+ + D+R +++ L+++ N+++ ++ ++ +
Sbjct: 232 QLRTSDPDIRRVIDNGIPASEQVGSLVTEAGPA--------LTTNLSNLSAVAAAAAPTL 283
Query: 319 REITDQRQKIISTINTIENIT-SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
+ + + + + E + ++ + ++ + +R
Sbjct: 284 PSLQPFLLFLPALAGAAPTVAPGDGTVHLGLVLETNNPLSCTVGYEGTMAILDEMKRKDP 343
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDC----LNNFERNP 433
F DT++ + Q S++G+ + T +D + NP
Sbjct: 344 NFDDTTQNFPLNTAANCQAPQG-SETGVRSANRIAFADPNTSQPWDSKPKVDPDKLNLNP 402
>gi|290473845|ref|YP_003466719.1| paraquat-inducible protein B [Xenorhabdus bovienii SS-2004]
gi|289173152|emb|CBJ79925.1| paraquat-inducible protein B [Xenorhabdus bovienii SS-2004]
Length = 549
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/409 (9%), Positives = 94/409 (22%), Gaps = 27/409 (6%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ I L+ V F G VG + D + L + I + P T +R
Sbjct: 164 VLISEKAGQLTPGDPVLFRGYRVGSVETSTFDPKSR---LIRYQIFVNAPYDGLLTTGVR 220
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
+G+ + S + + + N +
Sbjct: 221 FWKDSGVAFDMSSQGLRVEVASLSTLFGGGVSFDVPKGWDLGNPVKEKETFKLYDSEKNI 280
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
++ + + + +
Sbjct: 281 QNSLYTKHKDLLLF----------FADSVRGLQLGAPVEFRGIRVGTVAKVSFYTEGVRQ 330
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + ++ I ++ E + ++ + +D
Sbjct: 331 RLDNDFRIPVLIHIEPERFEKEIGSGFYTDKELEEIIARGLRASLKPGNLLTGALFIDLD 390
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
++ + + + I
Sbjct: 391 FYPNEEKWIGPYEIAGYEILPTVSGGLAQIQQKVIMALDKINNIPIEPVFVQATRTLEES 450
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ + + M ++N I A KE L KD Q + + + I
Sbjct: 451 QKTIKAAQKTMDELNRILASKETQGLPKDIQNTLQELNRSMQGIQP------------GS 498
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + + +++L + + L +V+ E +K +PK
Sbjct: 499 PAYNKLIDNMQRLDQVLRELQPVLKTLNNKSNALVF--EAEEMKDPEPK 545
Score = 58.4 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 23/63 (36%), Gaps = 5/63 (7%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
N ++++ SV GL + V F GI VG + + E + + D
Sbjct: 282 NSLYTKHKDLLLFFADSVRGLQLGAPVEFRGIRVGTVAKVSFYTEG-----VRQRLDNDF 336
Query: 92 PLY 94
+
Sbjct: 337 RIP 339
>gi|194337272|ref|YP_002019066.1| Mammalian cell entry related domain protein [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309749|gb|ACF44449.1| Mammalian cell entry related domain protein [Pelodictyon
phaeoclathratiforme BU-1]
Length = 292
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 53/124 (42%), Gaps = 8/124 (6%)
Query: 1 MES----KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M++ K G+F V + F+ + + +++ + + I + V L+ ++
Sbjct: 1 MKNPNALKWSDLKTGIFFVFGVCFAAYMGLVIGKNSNLFTGVTNIKI-LSSDVQSLAENN 59
Query: 57 SVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
V +G +G + + + + +A ++ + + ATI++ G+ G Y++
Sbjct: 60 FVSVSGKKIGTVSKMDFERRNGTLFVVATLRLKNEFAHLVTKDARATIKSLGILGDKYVD 119
Query: 114 LSTL 117
+ T
Sbjct: 120 IKTG 123
>gi|238785101|ref|ZP_04629096.1| hypothetical protein yberc0001_220 [Yersinia bercovieri ATCC 43970]
gi|238713993|gb|EEQ06010.1| hypothetical protein yberc0001_220 [Yersinia bercovieri ATCC 43970]
Length = 156
Score = 64.2 bits (153), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/99 (20%), Positives = 43/99 (43%), Gaps = 3/99 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PL 93
+ P + ++ GL T+S V+ G+ VGR+ + LD + + I+ +
Sbjct: 3 NQPTYRIYANF-DNIGGLKTNSPVKIGGVVVGRVADITLDTKNYSP-RVAMDIQQRYNHI 60
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+++ +RT GL G ++ L+ ++ I +
Sbjct: 61 PDTSSLAVRTSGLLGEQFLALNVGFEDPDMGTTILKDGG 99
>gi|120405104|ref|YP_954933.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957922|gb|ABM14927.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 427
Score = 64.2 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 11/120 (9%), Positives = 33/120 (27%), Gaps = 4/120 (3%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
++ + V + + GL + D+ V+ G+ VG + +
Sbjct: 44 LVVALLVILAVSIGLFAGKFTETVPVTVI--SNRAGLVMNPDAKVKMRGVQVGSVRSIDY 101
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + + I + + G +++L + +
Sbjct: 102 RPDGTAALQLEMDPSQLHLIPSNVNVDIASSTVFGAKFVQLEAPPNPTGELKRGQVLAGD 161
>gi|218893545|ref|YP_002442414.1| hypothetical protein PLES_48331 [Pseudomonas aeruginosa LESB58]
gi|218773773|emb|CAW29587.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
Length = 157
Score = 64.2 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+++ VGLF+++ L +S + + + ++ G++ V
Sbjct: 1 MQTRTLEIGVGLFLLAGLLALLLLALRVSGLSVGNAGDTYKVYAYFDNIAGVTVRGKVTL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ + LD++ I + L +TA+I T GL G YI +S
Sbjct: 61 AGVTIGKVTAVDLDRDSYTG-RVTMEINQNVNNLPIDSTASILTAGLLGEKYIGISVG 117
>gi|239982865|ref|ZP_04705389.1| secreted protein [Streptomyces albus J1074]
Length = 427
Score = 64.2 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 36/124 (29%), Gaps = 16/124 (12%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYW--------------LSRSNQYDGPMAEVIIRIPGSV 49
+ +G + L F+ + L V + V
Sbjct: 9 RTAAAGIGGVLALGLGFTLALGAFAEAAPSFEGTENLPLPGGADLGSDPYTVTAEL-DDV 67
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
L S+V+ N + VGR+ + L E + I L A + L G
Sbjct: 68 LSLVPQSAVKVNDVAVGRVTRIELGGED-WAARVTMKINGKVRLPADAGARLEQSSLLGE 126
Query: 110 TYIE 113
Y++
Sbjct: 127 KYVQ 130
>gi|326331733|ref|ZP_08198021.1| putative Mce family protein [Nocardioidaceae bacterium Broad-1]
gi|325950532|gb|EGD42584.1| putative Mce family protein [Nocardioidaceae bacterium Broad-1]
Length = 447
Score = 64.2 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/407 (10%), Positives = 117/407 (28%), Gaps = 18/407 (4%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
L + S V P +V + S V G+ +G++ L
Sbjct: 46 IALVLMCGLLLV---SEVAAPDTKLVTASFPQAVS-IYEGSDVVVMGVKIGKVASLEPKG 101
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ H A D L A I T L +++L+ + +R
Sbjct: 102 D---HVDAVIEYESDYKLPKDVKAAIVTPTLVADRFVQLTPAYTGGPALADGGEIPIERT 158
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
A P ++ ++ + + + + + ++ + + I ++S
Sbjct: 159 ---AVPVELDRIYASLSELTTALGPNGANKNGALSDVLREGADALEGNGKIGNQAIADMS 215
Query: 196 HIDKMMHTTQVTPHSS-----DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
+++ S+ + T D + + Q + E Q
Sbjct: 216 EAAQVLGGNSEQLFSTLSQLSEVTRTLARNDDTTEKFLTDLSTVSTQLAGESDELDQALV 275
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
++ +E+ + ++ L + + + + + +
Sbjct: 276 AIAQAVKVTKSFVENNRDALVGDVKELNKTLNILAKEKETLGTVLDLAPLGIGNLAESFD 335
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
RS R +S I + + ++ +++ L + +
Sbjct: 336 ARSGSVGFRLQVGPIGSDLSNILCMV-VENDQIPGAKEICALFKALLPAGSTAPAGQALT 394
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN--FSQSGLNDIQNLVRKL 415
+ +T ++ + ++ +Q G++++ +++L
Sbjct: 395 EGSAPTDRDTETGLPLDTGTQAEQPEVEPEVVTQGGISELTGSLQEL 441
>gi|326333294|ref|ZP_08199541.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948938|gb|EGD41031.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 391
Score = 64.2 bits (153), Expect = 5e-08, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 2/124 (1%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL ++++ + + + + L+ ++V+ G+ +GR+
Sbjct: 9 GLTFIALILALIVGTV--ASYEGVFRSTVPLTVSSDRAGLTLAPGAAVKLRGVVIGRVGS 66
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ D + + TTA I G YI+L+ + I +T
Sbjct: 67 VDHDAGDGVSIQLEIDQDELNQISSDTTAEIVPPTAFGAKYIQLNPGEPGAERIQAGSTI 126
Query: 131 RNQR 134
R
Sbjct: 127 DADR 130
>gi|320007316|gb|ADW02166.1| virulence factor Mce family protein [Streptomyces flavogriseus ATCC
33331]
Length = 379
Score = 63.8 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/308 (11%), Positives = 91/308 (29%), Gaps = 15/308 (4%)
Query: 10 VGLFVVSILFFSFFSIYW------------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
+G V + + F+ + L E+ G V L+ SS
Sbjct: 16 LGALVAAGVCFALVATTTGLPSFSGIDQMPLPGGADLGDHPYEITAEF-GDVLSLAPQSS 74
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V+ N + VGR+ + L + + + + A + L G Y++LS
Sbjct: 75 VKVNDVAVGRVTKISLTP-GSWTAKVTMRVNGKIRMPANAYAHLEQSSLLGEKYVQLSPP 133
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFIS-NAENTSKKISDSSRHIQKIIENIEKPL 176
+R P F + + I+ ++ + +
Sbjct: 134 ADGTAKGSLSDGDRIPLVRTNRNPEVEEVFGALSMLLNGGGIAQLKTITTELNKALAGQE 193
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ + + T++ + +H + + + + T + + +
Sbjct: 194 PQIRSMLSRVDTLVTDLDTHKEDITDALDGVNRLAATLATRKQDVGTVLTGLSPGLKVLE 253
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
++ +L ++ + D V + D+ + + + D ++
Sbjct: 254 KQRGSLLTMLRSLDTLSTVAVDTVNRSKADMIADLKALAPTLKALADSGKDLPDSLQVLL 313
Query: 297 TSAFLENI 304
T F + +
Sbjct: 314 TYPFTDEV 321
>gi|251789294|ref|YP_003004015.1| paraquat-inducible protein B [Dickeya zeae Ech1591]
gi|247537915|gb|ACT06536.1| Mammalian cell entry related domain protein [Dickeya zeae Ech1591]
Length = 548
Score = 63.8 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/400 (8%), Positives = 97/400 (24%), Gaps = 26/400 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L+ V F G VG + D + + P T+ +R +G+
Sbjct: 171 LTAGDPVLFRGYRVGSVETSHFDPSAR---KMQYQLFVAAPYDQLVTSNVRFWKDSGVAL 227
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + A N E S +
Sbjct: 228 NLSAQGMRVEMGALSTLLSGGVSFDVPAGWDVGNSAHERDEYQLFDNQSSIQDSLYTEYK 287
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + S + I L+ +
Sbjct: 288 EYLMFFDESVRGLQAGAPVEFRGIRLGTVAEVPFFPRNLPQSFGSDYRIPVLVRIEPGRL 347
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
K ++N E + + + S + + + ++ L
Sbjct: 348 KPGLRDQINLEQELSKGAESGLRASMKTASLLTGALYVDLDFYPQQRGRVTSL------- 400
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + + + + + ++ +
Sbjct: 401 --TSMDGYPILPTVNGGLTQIQQKLMAALDKINGLPLNPMVEQATKTLAESQSTLRELQK 458
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
++ +N +++ L D QR + + + + P+ + +
Sbjct: 459 TLASLNKLTSSDAMQQLPADMQRTLRELNSSLQGVQPGSPAYNRMVGD------------ 506
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L +T+ L +++ E +PK
Sbjct: 507 MQRLDQTLRELQPLLRTLNDKSNALIF--EAPDADDPQPK 544
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 18/62 (29%), Gaps = 7/62 (11%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY-------PNHSLAKALIR 88
E ++ SV GL + V F GI +G + + I
Sbjct: 284 TEYKEYLMFFDESVRGLQAGAPVEFRGIRLGTVAEVPFFPRNLPQSFGSDYRIPVLVRIE 343
Query: 89 PD 90
P
Sbjct: 344 PG 345
>gi|325923180|ref|ZP_08184865.1| hypothetical protein XGA_3899 [Xanthomonas gardneri ATCC 19865]
gi|325546325|gb|EGD17494.1| hypothetical protein XGA_3899 [Xanthomonas gardneri ATCC 19865]
Length = 73
Score = 63.8 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 11/73 (15%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ + + + +F+ GL + + +L+ + + + NP +
Sbjct: 3 LDSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLL 62
Query: 439 GREKGSVKIYKPK 451
GR+ K ++PK
Sbjct: 63 GRDAP--KEFEPK 73
>gi|23016443|ref|ZP_00056199.1| COG1463: ABC-type transport system involved in resistance to
organic solvents, periplasmic component
[Magnetospirillum magnetotacticum MS-1]
Length = 320
Score = 63.8 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/298 (11%), Positives = 86/298 (28%), Gaps = 7/298 (2%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ S+ Y VG FV+++L + L+ + +V G+ + V
Sbjct: 1 MKDSRINYAMVGGFVLAMLVSLVVVVVVLTGRTGATENYYTRLA----NVAGIKYGTKVT 56
Query: 60 FNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
F G PVG++ + E + + + D + + A + GL
Sbjct: 57 FEGFPVGQVEKISPVHEGNTTAFRLEVSVASDWRIPKDSLARVAASGLL-AAVTLDIKGG 115
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + A + A N + Q++
Sbjct: 116 TSPEMLAPGADIPSGPAANIFAAMNDMAGQITDLNQTALKPLLFSLTQQVGSLGVIMEKH 175
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + V + + ++ + + K + + I +
Sbjct: 176 APELMANLLAVTQDLAAKTPRITADVEKMTGTLSGKVVTDANAERIKETLNNAAQLSAGL 235
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + ++ + N +++ T Q V + ID + + ++
Sbjct: 236 QDSRKKVDAMLTSLDKSITGNQDNIDQSIKDLRHTLQAVSRSIDSVTYNLDGTTRNLH 293
>gi|169628790|ref|YP_001702439.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169240757|emb|CAM61785.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 399
Score = 63.8 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/141 (16%), Positives = 43/141 (30%), Gaps = 4/141 (2%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL +V +L S + + + I++ S GL + V +G+ +G +
Sbjct: 8 GLSLVFLLVVSVTYLLVGVLHVRPLASSYPLTIQLAES-GGLLPNQDVTLHGVRIGSVDS 66
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
L N + + S + AG Y++ S +
Sbjct: 67 LTFTGTGVNAV---VNVDGGVRVPASAVVRVSGLSPAGEQYLDFSAGSDTGPFLTAGDVI 123
Query: 131 RNQRAMITATPSGINYFISNA 151
R I TP+ +
Sbjct: 124 TRDRTDIPVTPAQLLSHADGV 144
>gi|215446171|ref|ZP_03432923.1| MCE-family protein mce3F [Mycobacterium tuberculosis T85]
gi|289758081|ref|ZP_06517459.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289713645|gb|EFD77657.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
Length = 421
Score = 63.8 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 37/118 (31%), Gaps = 3/118 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++++ + ++++ G + GL +V + G VGR+ + L
Sbjct: 1 MIAVGVLAITFLHFVRLPAMLFGVGRYTVTMELVEAGGLYRTGNVTYRGFEVGRVAAVRL 60
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
A ++ + A + + G TY+EL +
Sbjct: 61 ---TDTGVQAVLALKSGIDIPSDLKAEVHSHTAIGETYVELLPRNAASPPLKNGDVIA 115
>gi|325142830|gb|EGC65199.1| paraquat-inducible protein B [Neisseria meningitidis 961-5945]
gi|325198769|gb|ADY94225.1| paraquat-inducible protein B [Neisseria meningitidis G2136]
Length = 546
Score = 63.8 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 34/388 (8%), Positives = 98/388 (25%), Gaps = 32/388 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + + +
Sbjct: 297 FFKQSVRGLTVG-------------------SPVEYKGLNVGVVSDVPYFDRNDSLHLFE 337
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I ++ + + + Q T + T ++
Sbjct: 338 NGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQ 397
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
S + D+ + ++ ++ S LN S +
Sbjct: 398 PSSSPKLRPHTVYADDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLNASLAELK 457
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ IN +S + ++ + + + R T + ++ D+QN
Sbjct: 458 STLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 505
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 506 TLQSLDKTLKDVQPVINTLKEKPNALIF 533
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/261 (12%), Positives = 74/261 (28%), Gaps = 24/261 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + + +
Sbjct: 391 MIELNDQPSSSPKLRPHTVYADDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVSGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T +I L + +L + + L + V NT+ +
Sbjct: 451 ASLAELKSTLKSINTLSNNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDVQNTLQSL 510
Query: 268 RETTQTFQEVGQKIDHLLSDF 288
+T + Q V + +
Sbjct: 511 DKTLKDVQPVINTLKEKPNAL 531
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/458 (10%), Positives = 119/458 (25%), Gaps = 37/458 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYADDTVIATQGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + ++ + + +L+ T+ + NN
Sbjct: 432 DLLDKFGKLPLDKTVSGLNASLAELKSTLKSINTLSNN 469
>gi|254819661|ref|ZP_05224662.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 339
Score = 63.8 bits (152), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/286 (10%), Positives = 78/286 (27%), Gaps = 14/286 (4%)
Query: 1 MESKN----YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+ + T +G V+++ + + + L +
Sbjct: 1 MKRRPLESYNKTWLGFIAVAVVAVVIGVMLLVHAIG---AGYRHYTAEFLQAAS-LRAGN 56
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
+ GIPVG + + L + H A +R + L + A I+ + G Y+ L
Sbjct: 57 PIVVAGIPVGNVTSMKLVGD---HVEAGLKVRDNIALGKDSRARIKVTTILGSRYLALEP 113
Query: 117 LRKEKKTIFQIATERNQRAMITA---TPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ + + +++ ++ ++ + ++ + +
Sbjct: 114 SGPAHLPHNTFDLAHTEVPYDLQAALQDATTTFEQVDSDRFAQSLAVLGKQLEGLPAVVP 173
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ +T I+ + T + +A
Sbjct: 174 QAITNINTLSSIIAVRRDQLGQLLRSTEQVTNTLRRQQAGIGNLVNQGQDLLGQFVARRA 233
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ + + + S V + + D+R+ T
Sbjct: 234 VFHAMMQSLTSLVDTMSQVVVNDRAGLDALIKDMRDFTALMSAHDD 279
>gi|262201124|ref|YP_003272332.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262084471|gb|ACY20439.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 367
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/302 (12%), Positives = 93/302 (30%), Gaps = 13/302 (4%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-----EY 77
++ + E + L+ VR G+ VG++ + + +
Sbjct: 24 LLALTIANAGGDGDAGYE---ALFTDATLLNPGDDVRIAGVRVGQVESVDVVRVHEGDNE 80
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-KEKKTIFQIATERNQRAM 136
+ +L K + D L T IR + L G+ Y+ L +T+ + T
Sbjct: 81 VSKALVKFNVNRD-RLPAGTQLYIRYRNLTGLRYLGLERGAGDPNQTVSKGHTFGEGVDD 139
Query: 137 ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISH 196
+ P + N + + + I+ + +++ +
Sbjct: 140 RSTHPPVNLTELFNGFRPLFQQLSADDVNKLSENIIKVFDRQEDSISSLVASTADLTNAL 199
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL---QKVNQILENIQVSSNNF 253
DK ++ + + +T N D TSL + + + + I SN
Sbjct: 200 ADKDAVIGELITNLTRVLDTVNRHDDQFTSLLDNTEKLVTGLAAQRGSVGSAITSVSNLT 259
Query: 254 VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRS 313
+++ + T ++ + + +I+ D +K+ A + +
Sbjct: 260 SVTANILGATRPSIQGDIAGLKSLADQINARDDDVEEILKNLPVKLQKIGRAATFGSWFQ 319
Query: 314 SI 315
Sbjct: 320 FY 321
>gi|291004496|ref|ZP_06562469.1| MCE family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 391
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 90/280 (32%), Gaps = 6/280 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V +R V L ++ VR N +PVGR+ + L + + L+
Sbjct: 28 LPGGADVGSDPYTVKVRF-QDVLDLVPNAGVRVNDVPVGRVSEIGLAADS-WQAEVTVLV 85
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT---IFQIATERNQRAMITATPSGI 144
D L + TA +R L G Y+EL + + + R +
Sbjct: 86 NGDVKLPANATARLRQSSLLGEKYVELGQPAEPVQPVGRLVDGDVIDLARTSRNPEVEEV 145
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+S ++ +++ +E + + + + ++A + D +
Sbjct: 146 LGAMSML-LNGGGVAQLQNITKELNAALEGRESDVRSLLSNVDQLVAGLDAQRDDITRAL 204
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
S S N D + + ++ Q++ +Q +++ V +
Sbjct: 205 DSVNRLSASLNAQRGNIDTALRDIEPGLRVLNEQRGQLVTMLQSLDKLSGVATNVVNQSK 264
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
D+ +++ D ++ T F +N
Sbjct: 265 DDLVHNVNQLAPTLRELAAAGEDLPKSLEVLLTFPFPDNA 304
>gi|254671635|emb|CBA09347.1| Paraquat-inducible protein B [Neisseria meningitidis alpha153]
Length = 558
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 182 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 241
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 242 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 301
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 302 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 358
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 359 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSSSPKLR-------- 410
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + A + + T+ + + L + +
Sbjct: 411 -PHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELNGSLAELKSTLKSAN 469
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 470 AALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 517
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 518 TLQSLDKTLKDVQPVINTLKEKPNALIF 545
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 293 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 352
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 353 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 395
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 396 MIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELN 455
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 456 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 515
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 516 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 551
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/461 (9%), Positives = 120/461 (26%), Gaps = 38/461 (8%)
Query: 4 KNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
+ T + + ++ W+ V+ + S +G+ +++V +
Sbjct: 22 RKNNTLLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 77
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 78 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 136
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 137 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 196
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 197 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 256
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 257 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 316
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 317 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 376
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 377 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 436
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 437 DLLDKFDKLPLDKTVAELNGSLAELKSTLKSANAALSSIDK 477
>gi|148263951|ref|YP_001230657.1| hypothetical protein Gura_1894 [Geobacter uraniireducens Rf4]
gi|146397451|gb|ABQ26084.1| Mammalian cell entry related domain protein [Geobacter
uraniireducens Rf4]
Length = 324
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/303 (10%), Positives = 92/303 (30%), Gaps = 4/303 (1%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G+F + ++ + P ++ G S V+ +G +GR+
Sbjct: 15 KIGIFAAVAIAGVIAGVFLIGADKDIFTPKYQLKFT-AEKGTGFSRGMPVKLSGFRIGRV 73
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ L+Q+ + + + ++A + +GL G IE++ K +
Sbjct: 74 KTISLNQKAMVDIVIEIDKEYQKWIKNDSSAKLIKEGLVGDNIIEVAVGSPAGKVLKNGD 133
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA-NIETIS 187
R + N + ++ D +I +I++ L E
Sbjct: 134 IIRFE--KTKGLEEVANDIADKVKPVLIEVRDIISYINDPNGDIKQSLKNVNMLTQELHG 191
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
T + + + +T + + N N + + + + + + +Q
Sbjct: 192 TREHVDALLVSSKENIGAITRNGTTVLNNANEKINALGPTLEKVDRSMAKIEGSLPPLLQ 251
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + ++ + ++ + + + + + ++N
Sbjct: 252 KIDASLDHVEKTAQQVQKASEKAMPRIPQLINSAEDVMEGTDTLINALKDTWPIKNHVPV 311
Query: 308 TSN 310
+
Sbjct: 312 PNE 314
>gi|322832267|ref|YP_004212294.1| Mammalian cell entry related domain protein [Rahnella sp. Y9602]
gi|321167468|gb|ADW73167.1| Mammalian cell entry related domain protein [Rahnella sp. Y9602]
Length = 550
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 43/453 (9%), Positives = 107/453 (23%), Gaps = 44/453 (9%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIR-----IPGSVDG------------LSTDSS 57
+S L Y + G +E + G LS
Sbjct: 121 ISGLGTLLSGAYIQLQPGNKGGEKSEYKLDDSPPLASPDAKGIRVSLESERSGQLSPGDP 180
Query: 58 VRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V F G VG + D + N DT + + + ++ +
Sbjct: 181 VLFRGFQVGTVETSHFDPKARNIKYQLFIRAPYDTLVTDNVRFWKDSGVNFDMSAAGMRV 240
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
T+F P+G E + + I E++
Sbjct: 241 EMGSLTTLFSGGV-------SFDIPNGWTQGN---EAKNGDSYKLFDDQKSIQESLYTRH 290
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + L + + ++ N + ++ ++ I +
Sbjct: 291 TDYVMFFSDSIRGLQPGAPVEFRGIRLG----TVAEVPYPMNVVKQQMSDDYRIPVLIRI 346
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + ++ + +D ++ K +
Sbjct: 347 EPDRFVQLLGSNFNIEDHIRDGIAQGLRASMKSANLLTGAMYIDLDFYPNEKPWKGPLEI 406
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
L I + + + + + + + +
Sbjct: 407 GGHKLLPTVSGGFAQIQQKLMTTLDKINNLPIEPMMREATSTLAESQRTMKSTQKTIESL 466
Query: 357 NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
N I + KE +L +D Q+ + + + ++ ++ L
Sbjct: 467 NAIVSSKEMKNLPQDMQQTLIQLNRSLKGFQP------------GSPAYGNLVGDMQSLD 514
Query: 417 ETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+T+ L + +++ K
Sbjct: 515 KTLRELQPVLKTLNQKSNALIFAAPGQDDPQPK 547
>gi|298370076|ref|ZP_06981392.1| paraquat-inducible protein B [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281536|gb|EFI23025.1| paraquat-inducible protein B [Neisseria sp. oral taxon 014 str.
F0314]
Length = 553
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/388 (7%), Positives = 93/388 (23%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + VG++ + + H D + ++ + + T
Sbjct: 177 LNVSSPVLYENFMVGQVESARFEPSDQTVHYTIFIQSPNDKLINSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + S + + + ++ + +
Sbjct: 237 GSGVKLNSAPLPALLSGAISFDSPKTKD---SKNVKSEDSFTLYNSRSEVANLPDDRSLY 293
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + +N + + I
Sbjct: 294 YTAFFKQSVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLRLFENGWIPVRIRIEPSRME 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + K+
Sbjct: 354 INADEQSKEHWKQQFQAALGKGLTATISSNNLLTGSKMVELTDQPSSSPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATRGGGLDDLQAKVADLLEKFNNLPLDKTVTGLNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L T+ +N + P +++
Sbjct: 513 TLQSLDRTLRDVQPVINTLKEKPNALIF 540
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLRLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------MEINADEQSKEHWKQQFQAALGKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L +++ T +
Sbjct: 391 MVELTDQPSSSPKLRPHTVYAGDTVIATRGGGLDDLQAKVADLLEKFNNLPLDKTVTGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDRTLRDVQPVINTLKEKPNALIFNSSSKD 546
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/449 (10%), Positives = 121/449 (26%), Gaps = 36/449 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L + L + + GP+ +++ S +G+ +++V + + VGR+ + L
Sbjct: 28 LIPLIALLAGGWLLVKDIRNRGPVVTLLM---DSAEGIEVNNTVIKVLNVDVGRVTRIKL 84
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ A + D + T + + LSTL F
Sbjct: 85 RDDQKG-VEVTAQLNADAKDLIRSDTQFWVVKPRIDQSGVTGLSTLLSGSYIAFTPGKSN 143
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + I + K + + + + + +
Sbjct: 144 ETKDVFEVQDIPPIAAIGQSGLRLKLVGQNDKILNVSSPVLYENFMVGQVESARFEPSDQ 203
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
I ++ +S + S K+ A ++ + +
Sbjct: 204 TVHYTIFIQSPNDKLINSASRFWLESGINIETTGSGVKLNSAPLPALLSGAISFDSPKTK 263
Query: 252 NFVKSSDQVINTVHDVRETTQTFQE---------VGQKIDHLLSDFSSKMKSKETSAFLE 302
+ + T+++ R + Q + L + + K +
Sbjct: 264 DSKNVKSEDSFTLYNSRSEVANLPDDRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSD 323
Query: 303 -NIADSTSNMRSSISAIREITDQRQKIISTINTIENITS----NLNDSSQKFAELMSKIN 357
D ++R + + + + IN E + K N
Sbjct: 324 VPYFDRNDSLRLFENGWIPVRIRIEPSRMEINADEQSKEHWKQQFQAALGKGLTATISSN 383
Query: 358 NISALKENNSLFKD-------------AQRAMHTFR-DTSEKINRYIPSIGNNLQNF-SQ 402
N+ + L A + R + + + + N
Sbjct: 384 NLLTGSKMVELTDQPSSSPKLRPHTVYAGDTVIATRGGGLDDLQAKVADLLEKFNNLPLD 443
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + +L+ T+ + L++ ++
Sbjct: 444 KTVTGLNGSLAELKSTLKSANAALSSIDK 472
>gi|41409702|ref|NP_962538.1| Mce1_2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|18650592|gb|AAL75882.1| Mce [Mycobacterium avium subsp. paratuberculosis]
gi|41398534|gb|AAS06154.1| Mce1_2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 434
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 45/317 (14%), Positives = 102/317 (32%), Gaps = 14/317 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIP 64
Y GL ++ + + IY + P + + S GL S V +NG+
Sbjct: 15 YKLAGLAILVVGALALALIY--GQFRGNFTPKTSLTML--ASRAGLVMDPGSKVTYNGVE 70
Query: 65 VGRIVGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+GR+ + ++ + + P + + A I+ + G Y+ L+T
Sbjct: 71 IGRVGTISETVRDGKPAAKFTLEVYPRYLKLIPSNVNADIKATTVFGGKYVSLTTPANPS 130
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENT-----SKKISDSSRHIQKIIENIEKPL 176
T + R++ T + S AE + +S +++ + + E + +
Sbjct: 131 PQKITPHTIIDARSVTTEINTLFQTITSIAEKVDPVKLNLTLSAAAQSLSGLGEKFGQSV 190
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
A ++ ++ + I + +S F + + +
Sbjct: 191 VNANALLDDVNPRMPQARKDIQGLAALGDTYADASPDLFDFLNNAVITSRTINAQQKDLD 250
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
Q + ++ F K + HD+ T Q +I L+ + + +
Sbjct: 251 QALLSAAGFGNTGADLFNKGGPYLARGAHDLVPTAQLLDTYSPEIYCLMRNEHDALPATG 310
Query: 297 TSAFLENIADSTSNMRS 313
+ N N +
Sbjct: 311 AAEGGFNGYSLNMNTEA 327
>gi|328880853|emb|CCA54092.1| putative secreted protein [Streptomyces venezuelae ATCC 10712]
Length = 353
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/272 (7%), Positives = 66/272 (24%), Gaps = 9/272 (3%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ +V G+ S +R G+ VG + + + +
Sbjct: 26 VRALGDDGTRITAWFDRAV-GIYAGSDLRVLGVRVGEVESVEPQG---TRVRVRLRLDEG 81
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM-----ITATPSGIN 145
+ A + + Y++L+ + + A R S
Sbjct: 82 VRVPADARALVVAPSIVADRYVQLTPAYRTGPALADGAELPAARNRTPVEIDQLYDSITE 141
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + S + +N++ T +IE + T
Sbjct: 142 LSRALGPDGANSAGALSELLDTGAKNLKGNGTAIGTSIEQFGKAAKTLDGSSQDLFTTLG 201
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + + + + + ++ + + +
Sbjct: 202 QLQTFTTMLKEKDGDVRTAQERLDDVVGYFAENKDDLAGALKELGKALAQVKTFIKDNRG 261
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++++ + Q + + + +
Sbjct: 262 ELKKNVDRLVPITQALVEQRASLAEALDVAPL 293
>gi|226363709|ref|YP_002781491.1| Mce family protein [Rhodococcus opacus B4]
gi|226242198|dbj|BAH52546.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 374
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/391 (12%), Positives = 118/391 (30%), Gaps = 41/391 (10%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQG 105
+ G+ T++ V + G+PVGR+ + L + + + I P + S TA + +
Sbjct: 6 ETSGGIFTNAEVTYRGVPVGRVGNMSLAADG---VVVELRIDKTAPHIPASATAVVAKRS 62
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
G Y++L + + T P + S I +
Sbjct: 63 AIGEQYVDLQPSVDRGPFLADGSRIAA-VDASTPVPVEELLASTGGLTESVPIDALHTVV 121
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
++ + + ++S + + +D+ + + + +++ + +
Sbjct: 122 TELGAAFDGKGEDLQSLAGSLSGLSTSGADSLDRTVAPIRDSRTVLGTQSEQPSAIE--- 178
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + +D++ ++ DVR +++ L+
Sbjct: 179 ----------------------DFSADLDSLADRLRSSDPDVRRLIDNGNPASEQLGQLV 216
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
SD + A S T + +
Sbjct: 217 SDVGPGGTTNLAGLSATAKAISVQATA-------LRTLFVYLPGVAEASSTIAPDDGTVH 269
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
AE + + + ++ + +R F DT + + + Q S +G+
Sbjct: 270 LGLIAETNNPPSCTVGYEGTQTILAEMKRNDPNFDDTQQDFPQNTAASCEAPQG-SLTGV 328
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+V TV +D + +++P +
Sbjct: 329 RSADRIVFGDPATVQPWD---SKPKKDPNRL 356
>gi|325003321|ref|ZP_08124433.1| MCE family protein [Pseudonocardia sp. P1]
Length = 420
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/362 (11%), Positives = 97/362 (26%), Gaps = 7/362 (1%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPL 93
G V S L D+ VR G+PVG+I + + + I D L
Sbjct: 33 SGGGRPVTAYFT-SAAALFEDNDVRVLGVPVGKIEKITPEGD---RVRVDMTITDDDVTL 88
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
A + + L Y++L+ + + A +
Sbjct: 89 PADVKAAVVSPSLVTGRYVQLTPVYTGGPEWNGEPIPLERTAFPLGVDDLTRTATELSRA 148
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ ++++ + ++ + L + L + ++ T
Sbjct: 149 LGPQGANANGALNDTLDVAAQNLDGNGRALNDTIRNLGGLSTTLNGSSEDLFGTVTELQK 208
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
D A + + + N + V V D R ++
Sbjct: 209 FVATLKENDPGVRELNGKLADVTGFLAGQRGELGGALNELSYALGDVAGFVQDNRGALKS 268
Query: 274 FQEVGQKIDH--LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ + + + + A L N+A+ + ++ I + +
Sbjct: 269 NVDKLANVSQEVVDHQRALAEIADTAPAALGNLANIYNGSSETLDTRANINELAYPLPVA 328
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
I I + + A + + + + + Q + + N +P
Sbjct: 329 ICEILRRGAGTLPTEGPQAGAGALCDGLQPILDGAVPLPTPQEIITQLQQGVTPSNPALP 388
Query: 392 SI 393
+
Sbjct: 389 QL 390
>gi|204930012|ref|ZP_03221033.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204321006|gb|EDZ06207.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 546
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 35/403 (8%), Positives = 93/403 (23%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + +AT E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLATLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVAAHLAELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 454 LQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/265 (10%), Positives = 72/265 (27%), Gaps = 23/265 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVFNDDYRI 335
Query: 82 LAKALIRPDTPLYP-----STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
I P+ A + G+ + + A +
Sbjct: 336 PVLVRIEPERLKAQLGENADVAAHLAELLKRGLRASLKTG------NLVTGALYVDLDFY 389
Query: 137 ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISH 196
P E S ++ Q+++E ++K + + +T +
Sbjct: 390 PKEPPITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQR 449
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS 256
+ + TT + S + + + + + + + N V
Sbjct: 450 TMRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQPGSA-----AYNKMVAD 504
Query: 257 SDQVINTVHDVRETTQTFQEVGQKI 281
++ + +++ +T E +
Sbjct: 505 MQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|315443552|ref|YP_004076431.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261855|gb|ADT98596.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 392
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 11/120 (9%), Positives = 30/120 (25%), Gaps = 4/120 (3%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
++ + V + GL + D+ V+ G+ VG + +
Sbjct: 9 MVVALLVILAVSIGLFAGKFTETVPVTVISDR--AGLVMNPDAKVKMRGVQVGTVKSIDY 66
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + I + + G +++ + R
Sbjct: 67 RPDGTAALQLDMDPSQLPLIPENVNVDIASSTVFGAKFVQFEAPENPVGELRTGQVLRGD 126
>gi|256376289|ref|YP_003099949.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
gi|255920592|gb|ACU36103.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
Length = 342
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/81 (20%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ GP R V L+ VR +G+ +G++ + L + + +
Sbjct: 34 TGVDLGPGTGYTARFTD-VTALAEGDEVRMSGVRIGQVESMALVDD--ELVDVRFSVERG 90
Query: 91 TPLYPSTTATIRTQGLAGITY 111
L TAT++ + L G Y
Sbjct: 91 RSLSAEVTATVKYRNLVGQRY 111
>gi|296165589|ref|ZP_06848114.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899062|gb|EFG78543.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 353
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE-YPNH 80
F + P + GL D+ VR G+ VG++ L L++ +
Sbjct: 21 VFIVLVNVLRQPVAAPTRSYTAQFTD-ASGLHVDADVRVRGVRVGKVKSLALERRAGQSL 79
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + + + ++ I+ Q L G+ Y
Sbjct: 80 ATVEFSLDKRYAVVSTSRLAIKYQALTGLRY 110
>gi|289642561|ref|ZP_06474704.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
gi|289507649|gb|EFD28605.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
Length = 410
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 29/276 (10%), Positives = 77/276 (27%), Gaps = 7/276 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ ++ + G +V + IP + L+ S V NG G + L +
Sbjct: 5 IVLIVALVGVVI--GGIFWRGGDDYKVKLLIPSAAQ-LADGSPVWVNGAKAGSVQSLEV- 60
Query: 75 QEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+L + PL TT+ I G + L TI + +
Sbjct: 61 --KDGKALVTVSLNDGYAPLRDGTTSRIEWNSALGERMLTLYPGPAGNTTIPKGGMIEGK 118
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
I + + +++ ++ + ++ + + ++++ + ++L
Sbjct: 119 SLQIEVDQVLAVLDKPTRDKITSLVTELNQTVDGREPDLNATVRSAGSSVQALGSILEAV 178
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF 253
+ + + + Q+ + ++ +
Sbjct: 179 GRDGPAIRALVTQLQQMVAIGADHRQDLASVVNDLTSATGAVASQQQQLSDGLKELPSTL 238
Query: 254 VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + T Q++ D L S
Sbjct: 239 QTAKGTLDRVPKAGEPTIALLQDLKPATDRLPSVAR 274
>gi|325674604|ref|ZP_08154291.1| secreted protein [Rhodococcus equi ATCC 33707]
gi|325554190|gb|EGD23865.1| secreted protein [Rhodococcus equi ATCC 33707]
Length = 418
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 50/135 (37%), Gaps = 4/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ + F++ + F +R + G + + G+ +++ V +
Sbjct: 3 MVSRLARGQIAAFLILAVVSIVFVGGKYARLDNLLGFGQYSVFVDLPTSGGIFSNAEVTY 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+PVGR+ L L + + + P + S A + + G Y++L
Sbjct: 63 RGVPVGRVGDLQLTADG---VRVELRLDDGGPQVPASAAAVVANRSAIGEQYVDLQPTGS 119
Query: 120 EKKTIFQIATERNQR 134
+ + + + +
Sbjct: 120 DGPYLTEGSVIDRKD 134
>gi|242239090|ref|YP_002987271.1| paraquat-inducible protein B [Dickeya dadantii Ech703]
gi|242131147|gb|ACS85449.1| Mammalian cell entry related domain protein [Dickeya dadantii
Ech703]
Length = 548
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/402 (9%), Positives = 100/402 (24%), Gaps = 27/402 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
LS V F G VG + D + P T +R +GI
Sbjct: 171 LSPGDPVLFRGYRVGSVETGQFDANAR---KMTYQLFISAPYDSLVTTNVRFWKDSGIAL 227
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
S + + ++ A + + S++ +
Sbjct: 228 DLSSQG----MRVEMGSISTLLTGGVSFDVPAGWELGKLARDRDEYRLFDSKNSIQDSLY 283
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + + T P S I L ++
Sbjct: 284 TDYKEYLMFFDESVRGLQVGAPVEFRGIRLGTVMEVPFFPPSVFQRFDSDYRIPVLVRIE 343
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ V L + + + T + + + + +
Sbjct: 344 SERLKKSVRDKLNLDEELEKSLALGLSASLKTGNLLTGALYIDLDFYPQSKGKRPVLQTV 403
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + + + ++ + + ++ +
Sbjct: 404 DGYPVLPTVNGGLTQIQQKLMAVLD-----KVNNLPLNPMLDQATKTLAESQSTLREMQK 458
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
++ +N I+A L D Q+ + + + + P+ + +
Sbjct: 459 TLASLNRITASPAMQQLPDDLQQTLRELNHSLQGVQPGSPAYNRMVSD------------ 506
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVW---GREKGSVKIYKP 450
+++L +T+ L +++ G + K KP
Sbjct: 507 LQRLDQTLRELQPLLRTLNDKSNALIFEAPGAQDPQPKKAKP 548
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/294 (10%), Positives = 83/294 (28%), Gaps = 22/294 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + E ++ SV GL + V F GI +G ++ +
Sbjct: 277 SIQDSLYTDYKEYLMFFDESVRGLQVGAPVEFRGIRLGTVMEVPFFPPS-----VFQRFD 331
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + I ++ L +L+ + +K++ + + + I+
Sbjct: 332 SDYRIP--VLVRIESERLKKSVRDKLNLDEELEKSLALGLSASLKTGNLLTGALYIDLDF 389
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ Q + + T++ L + ++ P
Sbjct: 390 ---------------YPQSKGKRPVLQTVDGYPVLPTVNGGLTQIQQKLMAVLDKVNNLP 434
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ T+ + ++L +M K + +Q ++ ++ ++ +++ V+
Sbjct: 435 LNPMLDQATKTLAESQSTLREMQKTLASLNRITASPAMQQLPDDLQQTLRELNHSLQGVQ 494
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + + + L T N + +
Sbjct: 495 PGSPAYNRMVSDLQRLDQTLRELQPLLRTLNDKSNALIFEAPGAQDPQPKKAKP 548
>gi|87118353|ref|ZP_01074252.1| putative paraquat-inducible protein B [Marinomonas sp. MED121]
gi|86165987|gb|EAQ67253.1| putative paraquat-inducible protein B [Marinomonas sp. MED121]
Length = 551
Score = 63.8 bits (152), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/403 (7%), Positives = 114/403 (28%), Gaps = 31/403 (7%)
Query: 53 STDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+T + + G+ VGR + + ++ + A + +T + ++
Sbjct: 173 TTGDPIIYKGLTVGRFEKVKFNFEDRIVYYDAFIEEPYHQLITKNTRFWNTSGLRLDLSS 232
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+S +T+ + P + + + S +
Sbjct: 233 DGISVQTGNVETLLTNGITFGVPEGMLPGPVATEEDVFTIHSDKESASSTKYLHSVEYVM 292
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS--KNTFNTITDLITSLDK 229
+ + + + + ++ + ++ + L
Sbjct: 293 LISTSIRGLEVGAPVEYRGVHVGKVVATNLNLDAEKSLLENDLKIPVLLSLEPGLVGLPD 352
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
++ + + + + + + +++ + +K
Sbjct: 353 TKESEEGIRRQTQNWIKKGLKASLANGNILTGSLFVELQHFPDYPVDTIEK--------- 403
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
K N+ + I + + + + + + +L+ + +
Sbjct: 404 -KNDYVIIPTIENNLGQIANKATDFIDTLNK-----LPLEALTKDTQQVLKDLSATLSQL 457
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ KIN + + L Q + ++ ++ G N++
Sbjct: 458 NQTSRKINGLVDQTKAAELPNQLQETLDKVSTMTQGLSE------------GSPGYNELL 505
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS-VKIYKPK 451
N ++ +Q +++ LN + P +++ + S ++ +K +
Sbjct: 506 NTLQAIQSSLHELKPLLNKVKNRPNSLIFSDNQPSDIEPFKAQ 548
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 7/67 (10%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI--VGLFLDQ-----EYPNHSLAKALIRPD 90
E ++ I S+ GL + V + G+ VG++ L LD E + P
Sbjct: 287 SVEYVMLISTSIRGLEVGAPVEYRGVHVGKVVATNLNLDAEKSLLENDLKIPVLLSLEPG 346
Query: 91 TPLYPST 97
P T
Sbjct: 347 LVGLPDT 353
>gi|254513826|ref|ZP_05125887.1| paraquat-inducible protein B [gamma proteobacterium NOR5-3]
gi|219676069|gb|EED32434.1| paraquat-inducible protein B [gamma proteobacterium NOR5-3]
Length = 322
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 42/313 (13%), Positives = 95/313 (30%), Gaps = 10/313 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG FVV + ++V++ GS+ GL+ + V
Sbjct: 1 MSERKSSILVGAFVVGA-LIIAAAGALFFAGGGLGSERSKVVMVFDGSLRGLTIGAPVAL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSL---AKALIRPDTP-----LYPSTTATIRTQGLAGI-TY 111
G+ +G++ + L + S+ +A I P + + S + ++GLA
Sbjct: 60 RGVTIGQVTDIDLILDSDRASVTMIVEAEIDPASMQLVGSVTESILDELVSRGLAAQLNT 119
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L T + FQ E + ++ + P + S I +E
Sbjct: 120 QSLLTGLLYIQLDFQPDKESSVSSINSPHPQIPTIPTELEQIRRSLESIDYAAIADDVER 179
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
I L T + + + + S + +T + D T+ + +
Sbjct: 180 IATGLDTLLNSTDMQELPGSMRSSLAALEKASNSLTTTLDANSPALAEFLDEGTTTIRTL 239
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
I ++ V ++ + V + +++ + + + +
Sbjct: 240 NDQLPAITGSIQSSLARLDEALVSANTSLKGLEQTVAPNSPPRRQLSEAMQEVTLAARAL 299
Query: 292 MKSKETSAFLENI 304
+
Sbjct: 300 RSLARSLEEHPEA 312
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/207 (7%), Positives = 63/207 (30%), Gaps = 3/207 (1%)
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+L + +F + +++++ T ++I L + +
Sbjct: 118 NTQSLLTGLLYIQLDFQPDKESSVSSINSPHPQIPTIPTELEQIRRSLESIDYAAIADDV 177
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
+ ++ + ++ + + +N ++ E + I
Sbjct: 178 ERIATGLDTLLNSTDMQELPGSMRSSLAALEKASNSLTTTLDANSPALAEFLDEGTTTIR 237
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
++ + ++ Q ++ + N + + + S + ++++
Sbjct: 238 TLN--DQLPAITGSIQSSLARLDEALVSANTSLKGLEQTVAPNSPP-RRQLSEAMQEVTL 294
Query: 418 TVNHFDDCLNNFERNPQDIVWGREKGS 444
+ E +P+ ++ GR+ S
Sbjct: 295 AARALRSLARSLEEHPEALLRGRQGDS 321
>gi|193215280|ref|YP_001996479.1| mammalian cell entry related domain-containing protein
[Chloroherpeton thalassium ATCC 35110]
gi|193088757|gb|ACF14032.1| Mammalian cell entry related domain protein [Chloroherpeton
thalassium ATCC 35110]
Length = 312
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/292 (9%), Positives = 86/292 (29%), Gaps = 16/292 (5%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+ V + + ++ + +V I + L+ ++ V +G VG
Sbjct: 12 LKTGILFVFGIGLFAVLGLVIGKNTSLLTGLTKVYI-FVEDLQSLAQNNFVAVSGKKVGT 70
Query: 68 IVGLFLD-QEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+ + + + + + IR + + ++ A I++ G+ G Y+++
Sbjct: 71 VTDMGFETRNDKPGVVVQLSIRTEYIDMISKNSEARIKSLGVLGDKYVDIRPGSG----- 125
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
E + PS + + + Q + TT + +
Sbjct: 126 --SPIEDGDFLQVVHEPSIDDLSGQALSMMTSLNQILQKINQGEGTIGKLLTTTELLDKL 183
Query: 185 TISTVLANNISHIDK-----MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++ + + N + D+ +L ++ V
Sbjct: 184 DRTVANLEQTTNMLTNGNGLVSKMLTDGQMADKVSNMVTNLNDVSLALKDGKGSLGKLMV 243
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ N + + ++ + + ++ ++ S
Sbjct: 244 DESFYNNLNAVTQRADALISHLDNPNGTLGKLANDPTLYANLNRTVNSLDSL 295
Score = 41.5 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 55/182 (30%), Gaps = 12/182 (6%)
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ + + ++ QKI+ + + E L+ + + +
Sbjct: 138 HEPSIDDLSGQALSMMTSLNQILQKINQGEGTIGKLLTTTELLDKLDRTVANLEQTTNML 197
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
+ + + + + N+ +NLND S + + + + + +
Sbjct: 198 TNGNGLVSKMLTDGQMADKVSNMVTNLNDVSLALKDGKGSLGKLMVDESFYNNLNAVTQR 257
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ N + + N+ L L TVN D L + ++NP
Sbjct: 258 ADALISHLDNPNGTLGKLAND------------PTLYANLNRTVNSLDSLLVDLKQNPSR 305
Query: 436 IV 437
V
Sbjct: 306 YV 307
>gi|325919794|ref|ZP_08181787.1| hypothetical protein XGA_0727 [Xanthomonas gardneri ATCC 19865]
gi|325924092|ref|ZP_08185659.1| hypothetical protein XGA_4716 [Xanthomonas gardneri ATCC 19865]
gi|325545424|gb|EGD16711.1| hypothetical protein XGA_4716 [Xanthomonas gardneri ATCC 19865]
gi|325549708|gb|EGD20569.1| hypothetical protein XGA_0727 [Xanthomonas gardneri ATCC 19865]
Length = 69
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + + + +F+ GL + + +L+ + + + NP + GR
Sbjct: 1 SAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGR 60
Query: 441 EKGSVKIYKPK 451
+ K ++PK
Sbjct: 61 DAP--KEFEPK 69
>gi|325130707|gb|EGC53446.1| paraquat-inducible protein B [Neisseria meningitidis OX99.30304]
gi|325136679|gb|EGC59279.1| paraquat-inducible protein B [Neisseria meningitidis M0579]
gi|325201670|gb|ADY97124.1| paraquat-inducible protein B [Neisseria meningitidis M01-240149]
gi|325208594|gb|ADZ04046.1| paraquat-inducible protein B [Neisseria meningitidis NZ-05/33]
Length = 553
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + A + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVAELNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/461 (9%), Positives = 122/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 432 DLLDKFGKLPLDKTVAELNGSLAELKSTLKSANAALSSIDK 472
>gi|318059758|ref|ZP_07978481.1| secreted protein [Streptomyces sp. SA3_actG]
Length = 408
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 7/131 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M ++ FVV + + + +Y G V +P + GL T ++V
Sbjct: 1 MITRATLLKNIAFVVVAVLVLAYLGVRYADLGRYVGAADYYSVKAELPRT-GGLFTHANV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + A+ I+ P + A + G YI+L
Sbjct: 60 TYRGVSVGRVGDIGLTADG---VEAQLRIKKSAPRIPEDAKAVVADLSAVGEQYIDLRPE 116
Query: 118 RKEKKTIFQIA 128
+ +
Sbjct: 117 SDGGPYLGDGS 127
>gi|300784339|ref|YP_003764630.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793853|gb|ADJ44228.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 387
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 38/346 (10%), Positives = 99/346 (28%), Gaps = 10/346 (2%)
Query: 1 MESKNYYT--SVGLFVVSILFFSFFSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
M+ ++ G+ V++ F+ + L V V L
Sbjct: 1 MKGRSRIAGALAGVLVLAGCSDGGFNGLYGTPLPGGADVGDHPYHVTALFTD-VLDLVPQ 59
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-- 113
SSV+ N + VGR+ + L + +L + D L + A ++ L G ++E
Sbjct: 60 SSVKVNDVAVGRVDKITLTPDT-RSALVAMTVNGDIALPVNARAELKQSSLLGEKFVELS 118
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ T + R + + + + ++ + +
Sbjct: 119 VPTAEPATGKLADGGQIPLGRTNRNPEVEEV-LGALSLLLNGGGVEQIQKISHELNDALS 177
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
A + + + H +++ S +
Sbjct: 178 GNEPEIRALLSRVDELATQLDGHKTEILRAIDGLAKLSHTLTGQTQNLTNALDNLAPGLK 237
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ + +Q++ + + + D V + + + Q K+ + + ++
Sbjct: 238 VVTDQRDQLVGMLNALNTLSGVAVDTVTKSRDQLVANLKALQPTLAKLGEAGQNLPNALQ 297
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
T F + + +++ A + T ++ I
Sbjct: 298 ILLTYPFPDYAGNVIKGDYANVEANVNLDLDTLISNFTNSSQPPIA 343
>gi|225076076|ref|ZP_03719275.1| hypothetical protein NEIFLAOT_01108 [Neisseria flavescens
NRL30031/H210]
gi|224952575|gb|EEG33784.1| hypothetical protein NEIFLAOT_01108 [Neisseria flavescens
NRL30031/H210]
Length = 553
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 97/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVSSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGVKLDSAPLAALLSGAISFDSPKTSDSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGL---SAGSPVEYKGLNIGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDKTVAGLNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 85/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GLS S V + G+ +G + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLSAGSPVEYKGLNIGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + +++ +
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDKTVAGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 41/448 (9%), Positives = 122/448 (27%), Gaps = 34/448 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L + L + + GP+ +++ S +G+ ++++ + + VGR+ + L
Sbjct: 28 LIPLIALIAGGWLLVKDIRNRGPVVTLLM---DSAEGIEVNNTIIKVLNVDVGRVTRIKL 84
Query: 74 DQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ A+ + T + + L TL F +
Sbjct: 85 RDDQKGVEVTAQLSADAKDLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSQE 144
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + I + I + R + + + +
Sbjct: 145 TKDVFVVQDIPPIAAIGQSGLRLNLIGKNDRILNVSSPVLYENFMVGQVESAHFDPSDQS 204
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
I ++ +S + S K+ A ++ + +++
Sbjct: 205 VHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGVKLDSAPLAALLSGAISFDSPKTSD 264
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQ--------------------KIDHLLSDFSSKM 292
+ T++D R + + L S +
Sbjct: 265 SKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLSAGSPVEYKGLNIGVVSDV 324
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + L + +R I R + ++ N ++ +
Sbjct: 325 PYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNN 384
Query: 353 MSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIPSIGNNLQNF-SQS 403
+ + + L + S + + T + + + + + N
Sbjct: 385 LLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDK 444
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + +L+ T+ + L++ ++
Sbjct: 445 TVAGLNGSLAELKSTLKSANAALSSIDK 472
>gi|134103287|ref|YP_001108948.1| MCE family protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915910|emb|CAM06023.1| MCE family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 403
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/280 (14%), Positives = 90/280 (32%), Gaps = 6/280 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V +R V L ++ VR N +PVGR+ + L + + L+
Sbjct: 40 LPGGADVGSDPYTVKVRF-QDVLDLVPNAGVRVNDVPVGRVSEIGLAADS-WQAEVTVLV 97
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT---IFQIATERNQRAMITATPSGI 144
D L + TA +R L G Y+EL + + + R +
Sbjct: 98 NGDVKLPANATARLRQSSLLGEKYVELGQPAEPVQPVGRLVDGDVIDLARTSRNPEVEEV 157
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+S ++ +++ +E + + + + ++A + D +
Sbjct: 158 LGAMSML-LNGGGVAQLQNITKELNAALEGRESDVRSLLSNVDQLVAGLDAQRDDITRAL 216
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
S S N D + + ++ Q++ +Q +++ V +
Sbjct: 217 DSVNRLSASLNAQRGNIDTALRDIEPGLRVLNEQRGQLVTMLQSLDKLSGVATNVVNQSK 276
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
D+ +++ D ++ T F +N
Sbjct: 277 DDLVHNVNQLAPTLRELAAAGEDLPKSLEVLLTFPFPDNA 316
>gi|41406860|ref|NP_959696.1| hypothetical protein MAP0762 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395210|gb|AAS03079.1| hypothetical protein MAP_0762 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 237
Score = 63.4 bits (151), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 8/119 (6%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
++ V+ L + ++ N + G I + + + VR +G+ VG
Sbjct: 2 AALAAVVLVGLIVAGAAVLV---RNTFFGQKT--ITAYFTTATAIYPNDEVRVSGVKVGN 56
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
I + + + D P+ A I L Y++LS ++ +
Sbjct: 57 IKSIEPQG---TQAKMTLKVDHDVPIPADAKAVIVASNLVSARYVQLSPAYRDSGPVMP 112
>gi|307131470|ref|YP_003883486.1| paraquat-inducible protein B [Dickeya dadantii 3937]
gi|306528999|gb|ADM98929.1| paraquat-inducible protein B [Dickeya dadantii 3937]
Length = 548
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/400 (9%), Positives = 100/400 (25%), Gaps = 26/400 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L+ V F G VG + D + + P TA +R +G+
Sbjct: 171 LTAGDPVLFRGYRVGSVETSHFDPAAR---KMQYQLFVAAPYDQLVTANVRFWKDSGVAL 227
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + A N E +S +
Sbjct: 228 NLSAQGMRVEMGSLSTLLSGGVSFDVPAGWEVGNPAHERDEFQLFDNQNSIQDSLYTEYK 287
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + S ++ I L+ +
Sbjct: 288 EYLLFFDESVRGLQAGAPVEFRGIRLGTVAEVPFFPHNLPQSFDSDYRIPVLVRIEPGRL 347
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
K ++N E + + + S + + + ++ L
Sbjct: 348 KQGLRDQINLEQELSKGAVSGMRASMKTANLLTGALYVDLDFYPQQKGRVTSL------- 400
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + + + + + ++ +
Sbjct: 401 --TSMDGYPVLPTVNGGLTQIQQKLMSVLDKINSLPLNPMVEQATKTLAESQSTLRELQK 458
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
+ +N ++ + L +D QR + + + + P+ + +
Sbjct: 459 TLVSLNTLTNSEAMQQLPEDMQRTLRELNHSLQGVQPGSPAYNRMVGD------------ 506
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L +T+ L +++ E + +PK
Sbjct: 507 MQRLDQTLRELQPLLRTLNDKSNALIF--EAPGARDPQPK 544
Score = 57.3 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/260 (10%), Positives = 76/260 (29%), Gaps = 12/260 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + E ++ SV GL + V F GI +G + + +
Sbjct: 277 SIQDSLYTEYKEYLLFFDESVRGLQAGAPVEFRGIRLGTVAEVPFFPHNLPQSFDSDYRI 336
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I P L I + + + + A +
Sbjct: 337 PVLVRIEPG-RLKQGLRDQINLEQELSKGAVSGMRASMKTANLLTGALYVDLDFYPQQKG 395
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ + ++ IQ+ + ++ + + + + ++ +
Sbjct: 396 RVTSLTSMDGYPVLPTVNGGLTQIQQKLMSVLDKINSL--PLNPMVEQATKTLAESQSTL 453
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
Q T S ++ + L + + ++ ++ Q ++ + N V ++
Sbjct: 454 RELQKTLVSLNTLTNSEAMQQLPEDMQRTLRELNH--SLQGVQPGSPAYNRMVGDMQRLD 511
Query: 262 NTVHDVRETTQTFQEVGQKI 281
T+ +++ +T + +
Sbjct: 512 QTLRELQPLLRTLNDKSNAL 531
>gi|308389793|gb|ADO32113.1| pqiB protein [Neisseria meningitidis alpha710]
Length = 558
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 182 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 241
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 242 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 301
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 302 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 358
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 359 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 410
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + A + + T+ + + L + +
Sbjct: 411 -PHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVAELNGSLAELKSTLKSAN 469
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 470 AALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 517
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 518 TLQSLDKTLKDVQPVINTLKEKPNALIF 545
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 293 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 352
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 353 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 395
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 396 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFGKLPLDKTVAELN 455
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 456 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 515
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 516 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 551
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/461 (9%), Positives = 122/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 22 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 77
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 78 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 136
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 137 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 196
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 197 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 256
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 257 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 316
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 317 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 376
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 377 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 436
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 437 DLLDKFGKLPLDKTVAELNGSLAELKSTLKSANAALSSIDK 477
>gi|325920777|ref|ZP_08182682.1| hypothetical protein XGA_1661 [Xanthomonas gardneri ATCC 19865]
gi|325548751|gb|EGD19700.1| hypothetical protein XGA_1661 [Xanthomonas gardneri ATCC 19865]
Length = 73
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ + + + +F+ GL + + +L+ + + + NP +
Sbjct: 2 KVGSAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYL 61
Query: 438 WGREKGSVKIYKPK 451
GR+ K ++PK
Sbjct: 62 LGRDAP--KEFEPK 73
>gi|78188456|ref|YP_378794.1| VpsC protein [Chlorobium chlorochromatii CaD3]
gi|78170655|gb|ABB27751.1| VpsC protein [Chlorobium chlorochromatii CaD3]
Length = 292
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 55/126 (43%), Gaps = 8/126 (6%)
Query: 1 MES----KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M++ K G+F + + F+ + +S+++ + V IR + L+ ++
Sbjct: 1 MKNPNALKWSDLKTGIFFILGMGFAAYLGLVISKNSSLFSGVTTVKIR-SSDIQSLAENN 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
V +G +G + + + + +A +R + + ATI++ G+ G +++
Sbjct: 60 FVSVSGKKIGTVSKMEFVKSNDSLFVVASLRLRNEYAPLVTKDARATIKSLGVLGDKFVD 119
Query: 114 LSTLRK 119
+ T +
Sbjct: 120 IKTGKG 125
>gi|54027077|ref|YP_121319.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018585|dbj|BAD59955.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 421
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/283 (13%), Positives = 85/283 (30%), Gaps = 6/283 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + IR V L S+V+ G+PVGR+ + L ++ + + ++
Sbjct: 36 LPGGADLGEHPIRIDIRF-DDVLDLVPQSAVKVEGVPVGRVEEIGLAEDG-WTATVRTIV 93
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE---LSTLRKEKKTIFQIATERNQRAMITATPSGI 144
L A +R L G +IE + A +R AT
Sbjct: 94 NGSVDLPADARAEVRQSNLLGEKFIELSAPPEGDAGSARLGDGAVIPVERT-RHATEVEQ 152
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ ++ I ++ + + T + +E +T++ ++ +
Sbjct: 153 VLGAMSLLLNGGGVAQLQPIITEVNKALGGREERTRSLLEQANTLIGGLNEQVEDITRAI 212
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
S + I I ++ Q++ + D +
Sbjct: 213 DGLATLSSRVSGQTEQIAKIIDELPEGIRILEEQRPQLISLLTQLDRVGQAGFDVLDTAK 272
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
D+ + Q++ D + + T F + +S
Sbjct: 273 DDLIRDLSALRPTLQELARSAPDLVTALPLVPTYPFPDAALES 315
>gi|37525702|ref|NP_929046.1| paraquat-inducible protein B [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785131|emb|CAE14060.1| paraquat-inducible protein B [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 549
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 40/410 (9%), Positives = 102/410 (24%), Gaps = 27/410 (6%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
+I I L+ V F G VG + + + L + + + P T+ +
Sbjct: 163 VILISDKAGQLNPGDPVLFRGYRVGSVETSEFEPKSH---LMRYQLFINAPYDGLLTSNV 219
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
R +GIT+ S + + + A S
Sbjct: 220 RFWKESGITFDMSSQGVRVEMASLSTLFGGGVSFDVPKGWELGEPIKEKAIYKLFDNQRS 279
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ + + + + + +
Sbjct: 280 IQDSLYTEHKD----------YLLLFSDSVRGLQPGAPVEFRGIRMGTVAKVPFYSEGMR 329
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++ I ++ E + +S ++ + +
Sbjct: 330 QRLDNDFRIPVLISIEPERFEKELGEGFDVEKELNSITKRGLRASLKSGNLLTGALFIDL 389
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D ++ + L + N
Sbjct: 390 DFYPNEKGWAGPYEIAGYPLLPTISGGLAQIQHKVIAALDKINNMPVEPMFNQAIRTLEE 449
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ +K + + ++N + A E L KD Q+ + F + +
Sbjct: 450 SQKAIRKAQQTLDELNKVLANPETKDLPKDIQKTLQEFSRSMQGFQP------------G 497
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + + +++L + ++ L +V+ E ++ +PK
Sbjct: 498 SPAYNKMLDNMQRLDQVLSELRPVLRTLNNKSNALVF--ESKPIEDPEPK 545
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 56/218 (25%), Gaps = 17/218 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ SV GL + V F GI +G + + +
Sbjct: 279 SIQDSLYTEHKDYLLLFSDSVRGLQPGAPVEFRGIRMGTVAKVPFYSEGMRQRLDNDFRI 338
Query: 82 LAKALIRPDTPLYP-----STTATIRTQGLAGITYIELSTL---RKEKKTIFQIATERN- 132
I P+ + + G+ S + E+
Sbjct: 339 PVLISIEPERFEKELGEGFDVEKELNSITKRGLRASLKSGNLLTGALFIDLDFYPNEKGW 398
Query: 133 -QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
I P A+ K I+ + +E + T+ +
Sbjct: 399 AGPYEIAGYPLLPTISGGLAQIQHKVIAALDKINNMPVEPMFNQAIRTLEESQKAIRKAQ 458
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ ++K++ + D + T + +
Sbjct: 459 QTLDELNKVLANPETKDLPKDIQKTLQEFSRSMQGFQP 496
>gi|253990227|ref|YP_003041583.1| paraquat-inducible protein B [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781677|emb|CAQ84840.1| paraquat-inducible protein b [Photorhabdus asymbiotica]
Length = 549
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/463 (10%), Positives = 107/463 (23%), Gaps = 57/463 (12%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEV--------------IIRIPGSVDGLSTDS 56
G+ + L F + + +I L+
Sbjct: 118 GISGLGTLLSGAFIELQPGTFGNEEDKFYLLDSPPLASPDAKGIRVILSSDKAGQLNPGD 177
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V F G VG + + + +R Q Y L T
Sbjct: 178 PVLFRGYRVGSVETSEFEPKS---------------------HLMRYQLFINAPYDGLLT 216
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
I + + + + S F K + +++
Sbjct: 217 TNVRFWKDSGITVDLSSQGVRVEMASLSTLFGGGVSFDVPKGWELGEPVKEKSTYKLFDN 276
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+I + + + + K D
Sbjct: 277 IKSIQDSLYTEHKDYLLLFSDSVRGLQPGAPVEFRGIRMGTVAKVPFYSEGMKQRLDNDF 336
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSDFSSKMKSK 295
+ I + D + + + G + L D K
Sbjct: 337 RIPVLISIEPGRFEKELGEGFDVEKELNSITKRGLRASLKSGNLLTGALFIDLDFYPNEK 396
Query: 296 -ETSAFLENIADSTSNMRSSISAIRE------ITDQRQKIISTINTIENITSNLNDSSQK 348
T + + + ++ I+ + N + +K
Sbjct: 397 GWTGPYEISGYPLLPTISGGLAQIQHKVISALDKINNMPVEPMFNQAVRTLEESQKAIRK 456
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ + ++N + A E L KD Q+ + F + + N +
Sbjct: 457 AQQTLDELNKVLANPETKDLPKDIQKTLQEFNRSMQGFQT------------GSPAYNKM 504
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ +++L + ++ L +V+ E ++ +PK
Sbjct: 505 LDNMQRLDQVLSELRPVLRTLNNKSNALVF--EAKPIEDPEPK 545
>gi|41408209|ref|NP_961045.1| hypothetical protein MAP2111c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396564|gb|AAS04428.1| hypothetical protein MAP_2111c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 489
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 10/138 (7%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRS--NQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ + + + + + + + + V + +P S GL S V +
Sbjct: 5 NRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQS-GGLYQTSVVTY 63
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY----IELST 116
G VG++ + + A +R + A++ ++ G Y T
Sbjct: 64 RGTDVGQVKSVDVTATG---VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGT 120
Query: 117 LRKEKKTIFQIATERNQR 134
+ +T+ R
Sbjct: 121 GDHQSRTLRDGDVITAGR 138
>gi|229494436|ref|ZP_04388199.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318798|gb|EEN84656.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 332
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 87/286 (30%), Gaps = 8/286 (2%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
E + GL+ D V G+P G + L + + L
Sbjct: 40 KTNEYHAVF-ANATGLTQDDPVNVAGVPSGVVTSLAVSGNS---VEVTFRLDDGVTLGED 95
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
+ A I+ L G ++++ N T G ++ +
Sbjct: 96 SRADIKISTLLGRRSLDVTPNGSRSLPAGSTIPIENTSVPFTLDDLGRGAQSTSENLDLQ 155
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
++ + + + + + ++ I+ +S V+ +N + ++ Q T + +
Sbjct: 156 QLRNMLTVVSDNSPDDPELIRRSLEGIDALSGVVNDNDVALRSLLTGAQQTTATLIEQKD 215
Query: 217 FNTI----TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
DL+ S + + V + + + + V + + D+ T
Sbjct: 216 TLETLLGNADLVMSTIADRRDVLNALVQDLNQLSTTLAQFLGDNQALVDSVMGDIHVVTG 275
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
E Q + LL +F+ ++ + N D S
Sbjct: 276 VLSENEQSLTTLLDNFAPSVRYVTNATGNGNWLDLNSPSTLIPDNW 321
>gi|118466763|ref|YP_881285.1| virulence factor Mce [Mycobacterium avium 104]
gi|118168050|gb|ABK68947.1| virulence factor mce family protein [Mycobacterium avium 104]
Length = 486
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 18/138 (13%), Positives = 44/138 (31%), Gaps = 10/138 (7%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRS--NQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ + + + + + + + + V + +P S GL S V +
Sbjct: 2 NRRTWIQLSILALVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQS-GGLYQTSVVTY 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY----IELST 116
G VG++ + + A +R + A++ ++ G Y T
Sbjct: 61 RGTDVGQVKSVDVTATG---VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGT 117
Query: 117 LRKEKKTIFQIATERNQR 134
+ +T+ R
Sbjct: 118 GDHQSRTLRDGDVITAGR 135
>gi|325921242|ref|ZP_08183102.1| hypothetical protein XGA_2093 [Xanthomonas gardneri ATCC 19865]
gi|325548209|gb|EGD19203.1| hypothetical protein XGA_2093 [Xanthomonas gardneri ATCC 19865]
Length = 72
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + + + +F+ GL + + +L+ + + + NP + GR
Sbjct: 4 SAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGR 63
Query: 441 EKGSVKIYKPK 451
+ K ++PK
Sbjct: 64 DAP--KEFEPK 72
>gi|261392104|emb|CAX49601.1| conserved hypothetical protein [Neisseria meningitidis 8013]
Length = 553
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/388 (7%), Positives = 99/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSSSPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELNGSLAELKSALKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ ++ + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLAGNPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 82/276 (29%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 391 MIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+ + ++S+DK+ Q + L ++ DV
Sbjct: 451 GSLAELKSALKSANAALSSIDKLAGNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/467 (10%), Positives = 124/467 (26%), Gaps = 40/467 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVV 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER---NPQ 434
+ + + ++ + +L+ + + L++ ++ NPQ
Sbjct: 432 DLLDKFDKLPLDKTVAELNGSLAELKSALKSANAALSSIDKLAGNPQ 478
>gi|326382586|ref|ZP_08204277.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198705|gb|EGD55888.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 368
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/255 (13%), Positives = 68/255 (26%), Gaps = 9/255 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G V V G+ + V G+PVGRI + + +
Sbjct: 39 GQAKTVTAYF-DDVSGIFEGNDVAVLGMPVGRITSVEPQG---TRVKVTMTVDNSVDVPA 94
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
TA I + +IELS + + +N P I + +
Sbjct: 95 DVTAAIVNTSIVTTRHIELSPTYTQGPKLADGDVIKNT-----EAPVEIGTLFDSIDKIV 149
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
K +S I + ++ N E + L S +
Sbjct: 150 KSMSGDRPGEGPIADFVDVTSGIASGNGEKLRQALDALSKAGKLGADNGDALTSIIKSLS 209
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
T T + + + + + + + + NT + + +
Sbjct: 210 TLTTALTDNYPKMLQFSSSMTKVSDMLGDQSVGLVASLHDLNKTLQNTSEFLADNSGAIS 269
Query: 276 EVGQKIDHLLSDFSS 290
++ L ++ S
Sbjct: 270 GATGRMASLAANLSD 284
>gi|307261767|ref|ZP_07543433.1| hypothetical protein appser12_13260 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868585|gb|EFN00396.1| hypothetical protein appser12_13260 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 175
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLFV+ L F ++ + + ++ GL + ++ G+ VGR+
Sbjct: 11 VGLFVLFGLAALVFLGLRVANVQGFTSEKTYTLYATFDNIGGLKVRAPIKVGGVVVGRVS 70
Query: 70 GLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
+ LD + + D + +++ +I+T GL G YI L+
Sbjct: 71 DISLDAQTYTP-KVSLAVNEDFNKIPDTSSLSIKTSGLLGEQYIALNVGFM 120
>gi|269128538|ref|YP_003301908.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268313496|gb|ACY99870.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 434
Score = 63.4 bits (151), Expect = 7e-08, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 74/259 (28%), Gaps = 7/259 (2%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
P V +V GL S VR G+ VG++ + + + +
Sbjct: 36 PQRRVTAYFERAV-GLHPGSDVRILGMRVGKVTKVTPRGDT---VKVEMTYEARYKVPAD 91
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A I Q L +++L+ K T P ++ + + SK
Sbjct: 92 VQAVIVNQTLVADRFVQLAPAYKGTGPTLPDNATLGTD--RTHVPVEVDEVGGSLNDLSK 149
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANI-ETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + + + + T E + +A+ + + + +
Sbjct: 150 ALGPEGANADGSLSRLLQVSAETFEGQGEDLRQTIADTSRMLSTLSEDRDDVAATIRNLQ 209
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ +Q+ + + S + N +++ +
Sbjct: 210 IVTAAMVRTDRQIRQFNQDLAAVSSQLAQEREELSAALNTLGPTLRNVQRFIKDNRERLG 269
Query: 276 EVGQKIDHLLSDFSSKMKS 294
+ +K+ + + + KS
Sbjct: 270 DDVEKLAQITAVLVKQRKS 288
>gi|269128539|ref|YP_003301909.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268313497|gb|ACY99871.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 349
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/252 (13%), Positives = 79/252 (31%), Gaps = 7/252 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLY 94
G R GL D VR G+ VG++ + L + H I L
Sbjct: 38 GGGEYYTARFSE-AAGLRVDEEVRVAGVRVGKVTDMELAGD---HVKVTFRIEEEGVRLG 93
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE-- 152
T A I+ + + G Y+ L + + + + ++ + +
Sbjct: 94 ELTRAEIKIKSMLGSHYVALVPRGGGRLRGEIPLERTSVPYNVVPALNDLSKQVGQIDHA 153
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
++ + + E I L ETIS+ A D+ +Q+ +
Sbjct: 154 EVARSFQVLADTFENSPEEIRASLKGLRRLSETISSRDAQLHELADRARSVSQLLADRNA 213
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
D + + + + Q + + + Q + ++ ++ + ++ +
Sbjct: 214 DFARLIEDGDRLLQAVRARREVIHQLLVRTVLLSQQVNALIAENEAELKPMLANLERVSD 273
Query: 273 TFQEVGQKIDHL 284
+ +D +
Sbjct: 274 ILLRNQKNLDRM 285
>gi|145223095|ref|YP_001133773.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215581|gb|ABP44985.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 397
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 11/120 (9%), Positives = 30/120 (25%), Gaps = 4/120 (3%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
++ + V + GL + D+ V+ G+ VG + +
Sbjct: 14 MVVALLVILAVSIGLFAGKFTETVPVTVISDR--AGLVMNPDAKVKMRGVQVGTVKSIDY 71
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + I + + G +++ + R
Sbjct: 72 RPDGTAALQLDMDPSQLPLIPENVNVDIASSTVFGAKFVQFEAPENPVGELRTGQVLRGD 131
>gi|240173064|ref|ZP_04751722.1| MCE-family protein [Mycobacterium kansasii ATCC 12478]
Length = 567
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 46/137 (33%), Gaps = 7/137 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ + +F + + + ++ V + +P GL S+V
Sbjct: 1 MLTRFVRIQLAIFTIVGIVGVVVMVLMYIQAPTLLGIGRITVTLEVPA-AGGLYRFSNVT 59
Query: 60 FNGIPVGRIVGLFL-----DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
+ G+ VG++ + L D + + A + + A +R+ G Y++L
Sbjct: 60 YRGVQVGKVTAVGLTSHCSDPKRSPCTNATLSLGSSPKIPADLQADVRSISAVGEQYVDL 119
Query: 115 STLRKEKKTIFQIATER 131
+ +
Sbjct: 120 RPRTNSPPYLHNGSVIP 136
>gi|163788336|ref|ZP_02182782.1| hypothetical protein FBALC1_08143 [Flavobacteriales bacterium
ALC-1]
gi|159876656|gb|EDP70714.1| hypothetical protein FBALC1_08143 [Flavobacteriales bacterium
ALC-1]
Length = 313
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 16/109 (14%), Positives = 35/109 (32%), Gaps = 5/109 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + V+S + + +L N + LS S++
Sbjct: 1 MKI-SREVKTAILVLSGIALFIYLFSYLKGDN-IFSNTETYYTEFEYNA--LSPSSAITV 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
G +G+I + D E + + P ++ + G+ G
Sbjct: 57 KGNRIGKIEDIKYDFET-GKTKVSFSVNPKLKFSKNSIIRLYETGIMGG 104
>gi|254673093|emb|CBA07795.1| Paraquat-inducible protein B [Neisseria meningitidis alpha275]
Length = 558
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/388 (7%), Positives = 99/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 182 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 241
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 242 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 301
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 302 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 358
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 359 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSSSPKLR-------- 410
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + + T+ + + L + +
Sbjct: 411 -PHTVYAGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELNGSLAELKSALKSAN 469
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ ++ + ++ + + + R T + ++ D+QN
Sbjct: 470 AALSSIDKLAGNPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 517
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 518 TLQSLDKTLKDVQPVINTLKEKPNALIF 545
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 82/276 (29%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 293 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 352
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 353 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 395
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 396 MIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELN 455
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+ + ++S+DK+ Q + L ++ DV
Sbjct: 456 GSLAELKSALKSANAALSSIDKLAGNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 515
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 516 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 551
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/467 (10%), Positives = 124/467 (26%), Gaps = 40/467 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 22 RKNNTFLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 77
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 78 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 136
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 137 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 196
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 197 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 256
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 257 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 316
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 317 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 376
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 377 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVV 436
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER---NPQ 434
+ + + ++ + +L+ + + L++ ++ NPQ
Sbjct: 437 DLLDKFDKLPLDKTVAELNGSLAELKSALKSANAALSSIDKLAGNPQ 483
>gi|261381007|ref|ZP_05985580.1| paraquat-inducible protein B [Neisseria subflava NJ9703]
gi|284796040|gb|EFC51387.1| paraquat-inducible protein B [Neisseria subflava NJ9703]
Length = 553
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 32/388 (8%), Positives = 97/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + VG++ D + H D + S+ + + T
Sbjct: 177 LNVSSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLINSSSRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGVKLNSAPLAALLSGAISFDSPKTSDSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLT---AGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDKTVAGLNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVSKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 85/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + +++ +
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDKTVAGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVSKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 43/448 (9%), Positives = 122/448 (27%), Gaps = 34/448 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L + L + + GP+ +++ S +G+ +++V + + VGR+ + L
Sbjct: 28 LIPLIALIAGGWLLVKDIRNRGPVVTLLM---DSAEGIEVNNTVIKVLNVDVGRVTRIKL 84
Query: 74 DQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ A+ + T + + L TL F +
Sbjct: 85 RDDQKGVEVTAQLSADAKDLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSQE 144
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + I + I + R + + + +
Sbjct: 145 TKDVFVVQDIPPIAAIGQSGLRLNLIGKNDRILNVSSPVLYENFMVGQVESAHFDPSDQS 204
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
I ++ SS + S K+ A ++ + +++
Sbjct: 205 VHYTIFIQSPNDKLINSSSRFWLESGINIETTGSGVKLNSAPLAALLSGAISFDSPKTSD 264
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQ--------------------KIDHLLSDFSSKM 292
+ T++D R + + L S +
Sbjct: 265 SKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSDV 324
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + L + +R I R + ++ N ++ +
Sbjct: 325 PYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNN 384
Query: 353 MSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIPSIGNNLQNF-SQS 403
+ + + L + S + + T + + + + + N
Sbjct: 385 LLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDK 444
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + +L+ T+ + L++ ++
Sbjct: 445 TVAGLNGSLAELKSTLKSANAALSSIDK 472
>gi|312138400|ref|YP_004005736.1| mce family protein mce3 [Rhodococcus equi 103S]
gi|311887739|emb|CBH47051.1| putative Mce family protein Mce3 [Rhodococcus equi 103S]
Length = 418
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 50/135 (37%), Gaps = 4/135 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ + F++ + F +R + G + + G+ +++ V +
Sbjct: 3 MVSRLARGQIAAFLILAVVSIVFVGGKYARLDNLLGFGQYSVFVDLPTSGGIFSNAEVTY 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+PVGR+ L L + + + P + S A + + G Y++L
Sbjct: 63 RGVPVGRVGDLQLTADG---VRVELRLDDGGPQVPASAAAVVANRSAIGEQYVDLQPTGS 119
Query: 120 EKKTIFQIATERNQR 134
+ + + + +
Sbjct: 120 DGPYLAEGSVIDRKD 134
>gi|302523961|ref|ZP_07276303.1| mce family protein [Streptomyces sp. AA4]
gi|302432856|gb|EFL04672.1| mce family protein [Streptomyces sp. AA4]
Length = 342
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 3/92 (3%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+S +N + R L + VR G+ VG++ + + + +
Sbjct: 27 ISIANINTTSTSAYSARFTD-ATLLLPNDDVRIAGVRVGQVKDVKIV--DKRQAQVDFEV 83
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
L TA I+ + L G Y+ L
Sbjct: 84 DSGRKLPAGVTAQIKFRNLVGQRYVSLGEGDD 115
>gi|41410184|ref|NP_963020.1| hypothetical protein MAP4086 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41399018|gb|AAS06636.1| hypothetical protein MAP_4086 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 484
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/286 (10%), Positives = 77/286 (26%), Gaps = 6/286 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ T VGL + + + G++ V+ G
Sbjct: 9 TEFNRTRVGLMGALVTVLVVGVGQSFTSVPMLFATPTYY-AQFTD-AGGINVGDKVQIAG 66
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + L + + L + P + + + IRT G + + +
Sbjct: 67 VNVGLVSSLVIRGD---RVLVGFSM-PGKTIGAQSRSAIRTDTFLGRKNMAIQPRGADPL 122
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
I + ++ + + + S + + L +
Sbjct: 123 PPHGIIPSGQTTTPYQIYDAFVDVTKAATDWNIDVVKRSLNVLSETFNQTAPHLKAALDG 182
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ S + N I +++ ++ + + Q ++ +
Sbjct: 183 VARFSGTIGNRDEQIKQLLTNADKITRVLGDRSGQVDALLVNANTLLAAFRQRSQALSAL 242
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
L N+ S + + +R+ E+ ++ L
Sbjct: 243 LSNVSAVSTQVSGFIKENPDAHQVLRQLGTVSDELVKRKKELSDVL 288
>gi|325922543|ref|ZP_08184303.1| hypothetical protein XGA_3327 [Xanthomonas gardneri ATCC 19865]
gi|325546982|gb|EGD18076.1| hypothetical protein XGA_3327 [Xanthomonas gardneri ATCC 19865]
Length = 70
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + + + +F+ GL + + +L+ + + + NP + GR
Sbjct: 2 SAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGR 61
Query: 441 EKGSVKIYKPK 451
+ K ++PK
Sbjct: 62 DAP--KEFEPK 70
>gi|297190645|ref|ZP_06908043.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|197719872|gb|EDY63780.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 392
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/86 (23%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L G E+ V L SSV+ N + VGR+ + L+++ + +
Sbjct: 55 LPGGADLGGDPYEITAEF-ADVLSLVPQSSVKVNDVAVGRVTKITLNRDD-WSAKVTMRV 112
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE 113
D L + A + L G YI+
Sbjct: 113 AGDVKLPANAYAHLEQSSLLGEKYIQ 138
>gi|83815722|ref|YP_446601.1| mce related protein [Salinibacter ruber DSM 13855]
gi|83757116|gb|ABC45229.1| mce related protein [Salinibacter ruber DSM 13855]
Length = 272
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
GL+ + VR G+ VG + + L+QE A+ I + + A +
Sbjct: 5 FEEASGLTAGNPVRMKGVNVGSVESIRLNQET-QTVRARLRIEEGIRIPEGSHAKVAGFS 63
Query: 106 LAGITYIELSTLRKEKKTIFQIAT 129
G I + +E + AT
Sbjct: 64 GIGGVRISILPGPRENPPLPPDAT 87
>gi|238021444|ref|ZP_04601870.1| hypothetical protein GCWU000324_01344 [Kingella oralis ATCC 51147]
gi|237868424|gb|EEP69430.1| hypothetical protein GCWU000324_01344 [Kingella oralis ATCC 51147]
Length = 549
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/389 (9%), Positives = 96/389 (24%), Gaps = 24/389 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S V + VG + D + + I+ + +
Sbjct: 175 IGAGSPVMYENHTVGTVESAKFDPKTQS-VQYSIFIQS----PNESLVNSGSHFWLDSGI 229
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
K ++ + + PS N +I
Sbjct: 230 DVRLDGGGIKVDSAPLSAILSGAIAFDSPPSANNVSSGT-------TFTIHNDRAEIENQ 282
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ +A + L + K + V + + ++
Sbjct: 283 PNERTLYYVAFFNSSVRGLDIGAPVVYKGIRIGNVAAVPYFQAGDSAKLFEHGYVPVRIR 342
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
D + + + +++ T ++ + D S K
Sbjct: 343 IDPDRIEQRGDTPQSKAYWQSTFQAALDNGLTASLGSNNLVLGSKLVELNDSPSSTPPLK 402
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
S+ + + + A + T+ + L + +
Sbjct: 403 PHSEYGGDIVIGTRGGGLDDLQNQVAKLLDKFNALPLDKTVGELNGSLKELRGTLKSAQT 462
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
+++ N + A SL + + + R T + ++ D+QN
Sbjct: 463 MLASANKLIAQNSTQSLPAELNQTLRELRQTLQGVSPQ------------SPVYQDVQNT 510
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++ + T+ + + P +++ R
Sbjct: 511 LQSIDRTLQSAQPVIRTLKEQPNALIFNR 539
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/279 (11%), Positives = 85/279 (30%), Gaps = 23/279 (8%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP-------NHSLAK 84
NQ + + SV GL + V + GI +G + + Q + +
Sbjct: 281 NQPNERTLYYVAFFNSSVRGLDIGAPVVYKGIRIGNVAAVPYFQAGDSAKLFEHGYVPVR 340
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
I PD I +G + + ++ FQ A + A + + +
Sbjct: 341 IRIDPD---------RIEQRG-------DTPQSKAYWQSTFQAALDNGLTASLGSNNLVL 384
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ ++ H + + + + +++ L + + +
Sbjct: 385 GSKLVELNDSPSSTPPLKPHSEYGGDIVIGTRGGGLDDLQNQVAKLLDKFNALPLDKTVG 444
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
++ + + T + ++ S +K+I Q + L ++
Sbjct: 445 ELNGSLKELRGTLKSAQTMLASANKLIAQNSTQSLPAELNQTLRELRQTLQGVSPQSPVY 504
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
DV+ T Q+ Q ++ + + + ++
Sbjct: 505 QDVQNTLQSIDRTLQSAQPVIRTLKEQPNALIFNRGGKD 543
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 39/103 (37%), Gaps = 7/103 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS-VRF 60
+ + T V + L + Y L + + E+ + + + DG+ +++ +R
Sbjct: 12 KVRPSKTLVSTVWLIPLAAAIVGGYLL--IDSFRSRGTEIKLYM-DNADGIEVNNTTIRM 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATI 101
+ VGR++ + L + A I D + T +
Sbjct: 69 LNVEVGRVIRIRLQPDQKG-VELTAKIDKDGAALMRKDTQFWV 110
>gi|255065516|ref|ZP_05317371.1| paraquat-inducible protein B [Neisseria sicca ATCC 29256]
gi|255050341|gb|EET45805.1| paraquat-inducible protein B [Neisseria sicca ATCC 29256]
Length = 553
Score = 63.4 bits (151), Expect = 8e-08, Method: Composition-based stats.
Identities = 30/388 (7%), Positives = 93/388 (23%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + VG++ + + H D + + + + T
Sbjct: 177 LNVSSPVLYENFMVGQVESAHFEPADQTVHYTIFIQSPNDKLINSESRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGVKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLT---AGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRME 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + K+
Sbjct: 354 INADEQSKEHWKQQFQAALGKGLTATISSNNLITGSKMVELTDQPSSSPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQAKVADLLEKFNNLPLDKTVAGLNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L T+ +N + P +++
Sbjct: 513 TLQSLDRTLRDVQPVINTLKEKPNALIF 540
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 83/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------MEINADEQSKEHWKQQFQAALGKGLTATISSNNLITGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L +++ +
Sbjct: 391 MVELTDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLEKFNNLPLDKTVAGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDRTLRDVQPVINTLKEKPNALIFNSSSKD 546
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 43/449 (9%), Positives = 117/449 (26%), Gaps = 36/449 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L + L + + GP+ +++ S +G+ +++V + + VG + + L
Sbjct: 28 LIPLIALIAGGWLLVKDIRNRGPVVTLLM---DSAEGIEVNNTVIKVLNVDVGHVTRIKL 84
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ A + D + T + + LSTL F
Sbjct: 85 RDDQKG-VEVTAQLNADAKDLIRSDTQFWVVKPRIDQSGVTGLSTLLSGSYIAFTPGKSN 143
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + I + K + + + + + +
Sbjct: 144 ETKDVFEVQDIPPIAAIGQSGLRLKLVGQNDKILNVSSPVLYENFMVGQVESAHFEPADQ 203
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
I ++ S + S K+ A ++ + +
Sbjct: 204 TVHYTIFIQSPNDKLINSESRFWLESGINIETTGSGVKLNSAPLPALLSGAISFDSPKTK 263
Query: 252 NFVKSSDQVINTVHDVRETTQTFQE---------VGQKIDHLLSDFSSKMKSKETSAFLE 302
N + T++D R + Q + L + + K +
Sbjct: 264 NSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSD 323
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA---ELMSKI--- 356
++ R + + + + A L + I
Sbjct: 324 VPYFDRNDSLHLFENGWIPVRIRIEPSRMEINADEQSKEHWKQQFQAALGKGLTATISSN 383
Query: 357 -----NNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIPSIGNNLQNF-SQ 402
+ + L + S + + T + + + + N
Sbjct: 384 NLITGSKMVELTDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLEKFNNLPLD 443
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + +L+ T+ + L++ ++
Sbjct: 444 KTVAGLNGSLAELKSTLKSANAALSSIDK 472
>gi|251793144|ref|YP_003007872.1| ABC transporter periplasmic protein [Aggregatibacter aphrophilus
NJ8700]
gi|247534539|gb|ACS97785.1| conserved ABC-type transport system protein, periplasmic component
[Aggregatibacter aphrophilus NJ8700]
Length = 169
Score = 63.0 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 50/126 (39%), Gaps = 2/126 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + + ++ GL + ++ G+ VG
Sbjct: 8 EFWVGLFLLLGIASLVFLGLKVANVQGFSNTKSYQVYATFDNIGGLKVRAPLKVGGVVVG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
R+ + LD + I + + +++ +I+T GL G YI L+ +
Sbjct: 68 RVSNIELDPKTY-LPKVTIAINQEYNKIPETSSLSIKTSGLLGEQYIALNIGFDDGDIAM 126
Query: 126 QIATER 131
++
Sbjct: 127 LKDGDK 132
>gi|254774789|ref|ZP_05216305.1| virulence factor mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 444
Score = 63.0 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 36/331 (10%), Positives = 84/331 (25%), Gaps = 9/331 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
L + L + +GL VR G+ VG I +
Sbjct: 12 TALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEP 71
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + A + + L I+L T+ A
Sbjct: 72 QSAGS---KVTFSVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLSPGAAIPLS 128
Query: 134 RAMITATPSGINYFISNAENTSKK-----ISDSSRHIQKIIENIEKPLTTTIANIETIST 188
R + + + + ++ + +N+ T + +S
Sbjct: 129 RTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSVGEFVNSAADNLRGQGDTARDTVLKLSE 188
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H D + T + + + + + + + + N++ ++
Sbjct: 189 AISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPNEVGSALKS 248
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS-KMKSKETSAFLENIADS 307
D + + T + ++ D + NI
Sbjct: 249 LDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQP 308
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENI 338
+ + I A+ D Q I S+I
Sbjct: 309 AQSAMTGILALNNFADIPQFICSSIEAASRA 339
>gi|118619040|ref|YP_907372.1| Mce family protein Mce5F [Mycobacterium ulcerans Agy99]
gi|118571150|gb|ABL05901.1| Mce family protein Mce5F [Mycobacterium ulcerans Agy99]
Length = 416
Score = 63.0 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 47/126 (37%), Gaps = 5/126 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ SV V++++ + + + R + V + +P S GL + V G+ +
Sbjct: 21 TWLSVAGLVLTLVVAAAYLLVGALRLTPFAS-SYRVTVSLPES-GGLLPNQDVALRGVRI 78
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
GRI L L + A A I + S+T + AG +++ +
Sbjct: 79 GRIESLHLTESG---VDAIASITSQVKIPASSTVHVSALSPAGEQFLDFEPESDTGPYLS 135
Query: 126 QIATER 131
+ A
Sbjct: 136 EGAVIG 141
>gi|258543508|ref|YP_003188941.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-01]
gi|256634586|dbj|BAI00562.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-01]
gi|256637642|dbj|BAI03611.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-03]
gi|256640696|dbj|BAI06658.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-07]
gi|256643751|dbj|BAI09706.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-22]
gi|256646806|dbj|BAI12754.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-26]
gi|256649859|dbj|BAI15800.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-32]
gi|256652849|dbj|BAI18783.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655903|dbj|BAI21830.1| paraquat-inducible protein B [Acetobacter pasteurianus IFO 3283-12]
Length = 569
Score = 63.0 bits (150), Expect = 8e-08, Method: Composition-based stats.
Identities = 47/422 (11%), Positives = 119/422 (28%), Gaps = 32/422 (7%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ + G++ + + V F + VG ++G + + + +R
Sbjct: 167 GVRSDQPGRIYTLVAGNIGSIGQGAPVFFRDVDVGEVLGYTMPPGGRGPVMIQIFVRE-- 224
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
++ K + + + P + +
Sbjct: 225 --PYDHYLNTNSRFWNVSGVKVGFGAGGLKVQLQSLQALFSGGVAFGLPPVAESRLHPAS 282
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
E + + + A + +S + + +QVT
Sbjct: 283 EAPANTVFKLYDTHEDADN----------AGYRERVPLATYVMSSVKGLDVGSQVTMFGI 332
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
N + DL T+ I ++ + + + NN + + + T
Sbjct: 333 QVGNVTSVKLDLSTNPGHPRVRIGMEVQPERVLSPAELRNNNLTDMFRTLVANGLRASTD 392
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
G+ + L + + I M + ++ IT +
Sbjct: 393 SVSFLTGEGMISLNFIKNPAPATTSMEGPTLVIPSQAGGMGGIMDSLSTITSR-----LA 447
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
E I +N N+ + + + +L + ++ Q H R+ +++ +P
Sbjct: 448 AMPFEQIGTNANNLLAHADQTLVSPDVKQSLIGLRNSMQNLQALTHDLRNGMAPLSKRLP 507
Query: 392 SIGNNLQNFSQSGL-------------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ L Q+ ++Q++V +L +T + +P ++
Sbjct: 508 EMAQQLDQTLQNANRLLASYGGNSDFHRNLQSMVVQLGQTARSLRFLSDFLTNHPSALLS 567
Query: 439 GR 440
GR
Sbjct: 568 GR 569
>gi|296139949|ref|YP_003647192.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
gi|296028083|gb|ADG78853.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
Length = 356
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 40/292 (13%), Positives = 89/292 (30%), Gaps = 13/292 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSF-----FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
M + + G + + + L + ++ +V L +
Sbjct: 1 MSLRRRIFAGGALATAAVVLTACGSQGIYSLPLPGGPALGARPTTLHLQFS-NVLDLVPE 59
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
SSVR G VG++ + + + + +R + A I L G YI L
Sbjct: 60 SSVRIGGATVGKVESIGIAADG-WTAEVTVKVRDGVTVPADARAQIEQSNLLGEKYITLV 118
Query: 116 T-LRKEKKTIFQIATERNQRAMITATPS-----GINYFISNAENTSKKISDSSRHIQKII 169
+ + +++ AT + TA K I D
Sbjct: 119 SAGGSDGRSLPSGATIPATQNKTTAGIEEVLGVLSLVLNDGGVGQLKPIVDELNTAMSNP 178
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ +T T I+ ++ + ID + ++ + + T++
Sbjct: 179 RQVRSLITQTDELIKGLNEQRGDITRAIDGLAALSRRAQSQTTQISRILAELPRGTAVLN 238
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ ++ + Q+ V ++ +S + I + +R T + I
Sbjct: 239 QQRPEIIEMIKQLDRLGTVGTDVLSRSQQETIENLLALRPTLRALAGAADDI 290
>gi|118471615|ref|YP_884553.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118172902|gb|ABK73798.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 547
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 33/321 (10%), Positives = 81/321 (25%), Gaps = 5/321 (1%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
+ + V P V L V G+ VG I + +
Sbjct: 35 YFGMNAYRKLTNTTVTAYFPE-VLALYPGDKVLIMGVRVGSIDSIETAGD---KMKVVFH 90
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT-ERNQRAMITATPSGIN 145
+ + TA+I L I+LS T+ A + ++ + N
Sbjct: 91 FNNKYKVPENATASILNPSLVASRVIQLSPPYTGGPTLRDGAVLDVDRTQVPIEYDEVRN 150
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ IIE+ + L++ ++ +++
Sbjct: 151 QVTRLLADLGPTPEQPKGPFGDIIESFADGFAGKGEQLNRTLRGLSDALTALNEGRGDFF 210
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S +D A + + + + + +
Sbjct: 211 AVVKSLALFVNALHRSDQQFVALNNDLAQFTNSFTNTDQELANALQDLNRVLKTTREFLD 270
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ +++ + + + N+A + N+ S
Sbjct: 271 RNGGVLTHDIDNLEQVTTAILQPEPRDGLETGLHAYPNLAANVLNINSPNQGGIIGLPVL 330
Query: 326 QKIISTINTIENITSNLNDSS 346
+ + N ++ + S++ S
Sbjct: 331 PGVTNFSNPLQFVCSSIQAGS 351
>gi|325128715|gb|EGC51579.1| paraquat-inducible protein B [Neisseria meningitidis N1568]
Length = 553
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/388 (7%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSSSPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATRGGGLDDLQAKVVDLLDKFGKLPLDKTVAELNGSLAELKSALKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 TALSSIDKLIGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 83/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 391 MIELNDQPSSSPKLRPHTVYAGDTVIATRGGGLDDLQAKVVDLLDKFGKLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+ + ++S+DK+I Q + L ++ DV
Sbjct: 451 GSLAELKSALKSANTALSSIDKLIGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 43/461 (9%), Positives = 118/461 (25%), Gaps = 38/461 (8%)
Query: 4 KNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
+ T + + ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTLLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ-----RAMHTFRDTSEKINRYIPSIG 394
N ++ + + + + L + S + ++ +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYAGDTVIATRGGGLDDLQAKVV 431
Query: 395 NNLQNFS----QSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ L F + ++ + +L+ + + L++ ++
Sbjct: 432 DLLDKFGKLPLDKTVAELNGSLAELKSALKSANTALSSIDK 472
>gi|229488483|ref|ZP_04382349.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229323987|gb|EEN89742.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 416
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 42/420 (10%), Positives = 126/420 (30%), Gaps = 45/420 (10%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ ++ N V + S G+ T++ V + G+PVGR+ + L +
Sbjct: 22 LIYVGAKYVRLDNLLGFGQYTVKTELATS-GGIFTNAEVTYRGVPVGRVGDMSLTSDG-- 78
Query: 80 HSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
LI P + S A + + G +++L + + + T
Sbjct: 79 -IEVDLLIDSSAPQIPASARAVVANRSAIGEQFVDLQPDTDQGPFLEDGSVIAVGDT-TT 136
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
P +N S + +++ +++S + + + +
Sbjct: 137 PIPIENVLTSANGLVHSVPVDALHTVAKELGAAFNGKGEDLQVLADSLSGISQSGLDTLP 196
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ + + + +++ ++ + S + +
Sbjct: 197 QTLGLIRDSQTVLTTQSDQSSAI-------------------------KQFSTDLDALTA 231
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
Q+ + D+R +++ L+++ N+++ ++ ++ +
Sbjct: 232 QLRTSDPDIRRVIDNGIPASEQVGSLVTEAGPA--------LTTNLSNLSAVAAAAAPTL 283
Query: 319 REITDQRQKIISTINTIENIT-SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH 377
+ + + + + E + ++ + ++ + +R
Sbjct: 284 PSLQPFLLFLPALAGAAPTVAPGDGTVHLGLVLETNNPLSCTVGYEGTMAILDEMKRKDP 343
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDC----LNNFERNP 433
F DT++ + Q S++G+ + T +D + NP
Sbjct: 344 NFDDTTQNFPLNTAANCQAPQG-SETGVRSANRIAFADPNTSQPWDSKPKVDPDKLNLNP 402
>gi|326331666|ref|ZP_08197954.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950465|gb|EGD42517.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 364
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 36/105 (34%), Gaps = 3/105 (2%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ ++ + V + + + GL SSV + G G + + L + +
Sbjct: 27 YLLLVTLEIPLLSRPSTVTVDLERT-GGLYEGSSVTYRGAKAGVVETIELTTDGTAQAR- 84
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ PD + + A +R+ G Y++ + +
Sbjct: 85 -IRLDPDVRIPQDSPAEVRSLSPVGEQYLDFQPTTASGPFLRDGS 128
>gi|302523378|ref|ZP_07275720.1| secreted protein [Streptomyces sp. SPB78]
gi|302432273|gb|EFL04089.1| secreted protein [Streptomyces sp. SPB78]
Length = 414
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 7/131 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG--PMAEVIIRIPGSVDGLSTDSSV 58
M ++ FVV + + + +Y G V +P + GL T ++V
Sbjct: 1 MITRATLLKNIAFVVVAVLVLAYLGVRYADLGRYVGAADYYSVKAELPRT-GGLFTHANV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTL 117
+ G+ VGR+ + L + A+ I+ P + A + G YI+L
Sbjct: 60 TYRGVSVGRVGDIGLTADG---VEAQLRIKKSAPRIPEDAKAVVADLSAVGEQYIDLRPE 116
Query: 118 RKEKKTIFQIA 128
+ +
Sbjct: 117 SDGGPYLGDGS 127
>gi|41408211|ref|NP_961047.1| hypothetical protein MAP2113c [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396566|gb|AAS04430.1| hypothetical protein MAP_2113c [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 444
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/331 (10%), Positives = 84/331 (25%), Gaps = 9/331 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
L + L + +GL VR G+ VG I +
Sbjct: 12 TALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEP 71
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + A + + L I+L T+ A
Sbjct: 72 QSAGS---KVTFSVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYSGGPTLSPGAAIPLS 128
Query: 134 RAMITATPSGINYFISNAENTSKK-----ISDSSRHIQKIIENIEKPLTTTIANIETIST 188
R + + + + ++ + +N+ T + +S
Sbjct: 129 RTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSVGEFVNSAADNLRGQGDTARDTVLKLSE 188
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H D + T + + + + + + + + N++ ++
Sbjct: 189 AISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPNEVGSALKS 248
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS-KMKSKETSAFLENIADS 307
D + + T + ++ D + NI
Sbjct: 249 LDGALSDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQP 308
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENI 338
+ + I A+ D Q I S+I
Sbjct: 309 AQSAMTGILALNNFADIPQFICSSIEAASRA 339
>gi|325921530|ref|ZP_08183382.1| hypothetical protein XGA_2381 [Xanthomonas gardneri ATCC 19865]
gi|325547978|gb|EGD18980.1| hypothetical protein XGA_2381 [Xanthomonas gardneri ATCC 19865]
Length = 73
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 11/70 (15%), Positives = 28/70 (40%), Gaps = 2/70 (2%)
Query: 382 TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+ + + + +F+ GL + + +L+ + + + NP + GR+
Sbjct: 6 AAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGRD 65
Query: 442 KGSVKIYKPK 451
K ++PK
Sbjct: 66 AP--KEFEPK 73
>gi|126436760|ref|YP_001072451.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236560|gb|ABN99960.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 436
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSV 58
MES +G + +L + + + V + + GL T + V
Sbjct: 1 MESSGGERYLGWWTAILLVVIVALMLLSAGL-FKGSFRSFVPVTLTSDRSGLIMETGNKV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELST 116
RF G+ VGR+ + + I PD L +T A IR + G Y++L
Sbjct: 60 RFRGVQVGRVGSVT---AGTERVSLQLEIDPDEVQNLPANTRAQIRASTVFGAKYVDLIY 116
Query: 117 LRKE 120
Sbjct: 117 PDDP 120
>gi|325266672|ref|ZP_08133349.1| paraquat-inducible protein B [Kingella denitrificans ATCC 33394]
gi|324982115|gb|EGC17750.1| paraquat-inducible protein B [Kingella denitrificans ATCC 33394]
Length = 545
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/393 (8%), Positives = 84/393 (21%), Gaps = 28/393 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L S V F + VG + + + N I+ +Q
Sbjct: 173 LGAGSPVMFENLTVGSVETAKFNPKTQN-VEYSIFIQS----PNDVLVKSNSQFWLDSGV 227
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
K + + + + + A + + + + N
Sbjct: 228 SVRLDGGGVKIDSAPLPAILSGAIAFNTPTAAVGQKVQAA----------ANNQEFTVFN 277
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
L V N + + + D ++
Sbjct: 278 DRAELENKPNERTLYYVVFFKNSVRGLEAGAPVEYRGMRIGTVAQVPYFQDGDSAKLFEN 337
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ ++ + + + ++ S
Sbjct: 338 GWVPVRLRLDPDSMERGDEPQTREYWQNAMQAAFGKGLVATLSSNNLVLGSKMVELVDSS 397
Query: 292 M-KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ N ++ S + R ++ LN S +
Sbjct: 398 SGDALLKPHAQYNGHTVIASKGSGGLDELQDKVGRLLDKFNSLPLDKTLGELNGSLNQLK 457
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ ++ N + + + + R T + ++ DIQ
Sbjct: 458 QTLASANRLLGQNSTQKMPAELNATLQELRKTLQGVSPE------------SPMYQDIQQ 505
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ L T+ + P +++ +
Sbjct: 506 TLAALNRTLQDVQPLVRTLNEKPNALIFNQNGK 538
Score = 58.4 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 7/69 (10%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP-------NHSLAKALI 87
+ ++ SV GL + V + G+ +G + + Q+ + +
Sbjct: 287 NERTLYYVVFFKNSVRGLEAGAPVEYRGMRIGTVAQVPYFQDGDSAKLFENGWVPVRLRL 346
Query: 88 RPDTPLYPS 96
PD+
Sbjct: 347 DPDSMERGD 355
Score = 49.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 43/474 (9%), Positives = 136/474 (28%), Gaps = 48/474 (10%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS-VRFNG 62
+ T + L + I+ L ++ GP +++ + +G+ +++ +R
Sbjct: 13 RQSKTLASTVWIIPLIAAIAGIWLLVDYSRQQGPEITLLM---DNAEGIEVNTTTIRLLN 69
Query: 63 IPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATI-----------RTQGLAGIT 110
+ +GR+ + L ++ +AK + T + L +
Sbjct: 70 VEIGRVSSIRLRPDHKGVEVVAKLQPNAREMMREDTQFWVVKPRIDQNGVTGLNTLLSGS 129
Query: 111 YIELSTLRKEKKTIFQ-----IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
YI + +++ + + G N + A + + + +
Sbjct: 130 YISFAPGSSQEEASTFTVSELPPISAMGQHGLRLKLVGHNSKMLGAGSPVMFENLTVGSV 189
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ N + I++ + VL + S + ++ L
Sbjct: 190 ETAKFNPKTQNVEYSIFIQSPNDVLVKSNSQFWLDSGVSVRLDGGGVKIDSAPLPAILSG 249
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
++ + + Q N Q + ++ + T + L
Sbjct: 250 AIAFNTPTAAVGQKVQAAANNQEFTVFNDRAELENKPN----ERTLYYVVFFKNSVRGLE 305
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + + + R S E T +
Sbjct: 306 AGAPVEYRGMRIGTVAQVPYFQDGDSAKLFENGWVPVRLRLDPDSMERGDEPQTREYWQN 365
Query: 346 SQKFA------------------ELMSKINNISALKENNSLFKDAQRAMHTFRDT--SEK 385
+ + A +++ +++ S + + + + ++
Sbjct: 366 AMQAAFGKGLVATLSSNNLVLGSKMVELVDSSSGDALLKPHAQYNGHTVIASKGSGGLDE 425
Query: 386 INRYIPSIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCL--NNFERNPQDI 436
+ + + + + L ++ + +L++T+ + L N+ ++ P ++
Sbjct: 426 LQDKVGRLLDKFNSLPLDKTLGELNGSLNQLKQTLASANRLLGQNSTQKMPAEL 479
>gi|183221251|ref|YP_001839247.1| putative ABC transporter [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911342|ref|YP_001962897.1| ABC transporter substrate binding protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167776018|gb|ABZ94319.1| Substrate binding protein of an ABC transporter complex [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167779673|gb|ABZ97971.1| Putative ABC transporter [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 257
Score = 63.0 bits (150), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 15/134 (11%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VGL V L ++ + ++ + P +G+ + V
Sbjct: 1 MPTIGRALIVGLLFVFSLVA-VGYFTIVTEGGPFQKSGYQLPVYFPD-AEGIKIGNKVTI 58
Query: 61 NGIPVGRIVGLFLDQEYP-------------NHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+G+P G + + L Q L++ L+ + TI+ + L
Sbjct: 59 HGVPFGYVSKIRLVQIDEMGNLLPEGETGIGTKVELTLLLKGKVQLFANYEITIKNESLL 118
Query: 108 GITYIELSTLRKEK 121
+ L K
Sbjct: 119 SGRVVSLDPGSKFP 132
>gi|325675360|ref|ZP_08155044.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|325553331|gb|EGD23009.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 416
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ ++ +V R S G+ T++ V + G+PVGR+ L L Q+
Sbjct: 21 IGYVGAKYVRLDTLLGFGEYQVDARFANS-GGIFTNAEVTYRGVPVGRVGDLTLTQDG-- 77
Query: 80 HSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+I P + S A + + G Y++L E + +
Sbjct: 78 -VSVALMIDDSAPQIPASAKAVVANRSAIGEQYVDLQPDTDEGPFLTDGSVI 128
>gi|224584429|ref|YP_002638227.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468956|gb|ACN46786.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 546
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 93/403 (23%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S+ + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSSLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 454 LQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/276 (9%), Positives = 75/276 (27%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVF-----N 330
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + I + L + + + + +
Sbjct: 331 DDYRIP--VLVRIEPERLKAQLGENADVGAHLTELLKRG----------------LRASL 372
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + K I T+S+ LA + + + P
Sbjct: 373 KTGNLVTGALYVDLDFYPKEPPITGLREFDGYEIIPTVSSSLAQIQQRLVETLDKINNLP 432
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + NT+++ ++ ++ +D +++Q + + ++ ++ +
Sbjct: 433 LNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQ 492
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L +T N
Sbjct: 493 PGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNA 528
>gi|168237116|ref|ZP_02662174.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737553|ref|YP_002114064.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|194713055|gb|ACF92276.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289749|gb|EDY29110.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|322616438|gb|EFY13347.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322619689|gb|EFY16564.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322622615|gb|EFY19460.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629764|gb|EFY26539.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632514|gb|EFY29260.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322636991|gb|EFY33694.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322641470|gb|EFY38108.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646064|gb|EFY42580.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649634|gb|EFY46065.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322654065|gb|EFY50388.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322658597|gb|EFY54859.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322663454|gb|EFY59656.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670190|gb|EFY66330.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322671426|gb|EFY67548.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322676782|gb|EFY72849.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682706|gb|EFY78725.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322686386|gb|EFY82368.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323195121|gb|EFZ80303.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323199803|gb|EFZ84892.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202796|gb|EFZ87832.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323209067|gb|EFZ94004.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323213657|gb|EFZ98445.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323217973|gb|EGA02688.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323222005|gb|EGA06392.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226578|gb|EGA10783.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323229774|gb|EGA13897.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323232999|gb|EGA17095.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323240734|gb|EGA24776.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323243050|gb|EGA27071.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249787|gb|EGA33689.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252741|gb|EGA36579.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323259154|gb|EGA42798.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323259978|gb|EGA43606.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323268022|gb|EGA51501.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323269870|gb|EGA53319.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
Length = 546
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 92/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVAAHLAELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 454 LQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/265 (10%), Positives = 72/265 (27%), Gaps = 23/265 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVFNDDYRI 335
Query: 82 LAKALIRPDTPLYP-----STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
I P+ A + G+ + + A +
Sbjct: 336 PVLVRIEPERLKAQLGENADVAAHLAELLKRGLRASLKTG------NLVTGALYVDLDFY 389
Query: 137 ITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISH 196
P E S ++ Q+++E ++K + + +T +
Sbjct: 390 PKEPPITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQR 449
Query: 197 IDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKS 256
+ + TT + S + + + + + + + N V
Sbjct: 450 TMRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQPGSA-----AYNKMVAD 504
Query: 257 SDQVINTVHDVRETTQTFQEVGQKI 281
++ + +++ +T E +
Sbjct: 505 MQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|120403836|ref|YP_953665.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956654|gb|ABM13659.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 340
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 39/128 (30%), Gaps = 5/128 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T F ++++ + G S L + SVR GI +G
Sbjct: 5 ATKFAAFGLTMVLLTAGLFVIFGEYR--SGSTHGYSAVFADSSS-LESGDSVRVAGIRIG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L + A D L ST +R L G Y+EL K
Sbjct: 62 TVRSVNLQADNTVVVDFDAD--DDIRLTESTKVAVRYLNLVGDRYLELLDAPGSTKLQRP 119
Query: 127 IATERNQR 134
+ +R
Sbjct: 120 GSRIGVER 127
>gi|325921653|ref|ZP_08183488.1| hypothetical protein XGA_2494 [Xanthomonas gardneri ATCC 19865]
gi|325547842|gb|EGD18861.1| hypothetical protein XGA_2494 [Xanthomonas gardneri ATCC 19865]
Length = 73
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 11/71 (15%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ + + + +F+ GL + + +L+ + + + NP + GR
Sbjct: 5 SAAGNADNILGENRAAINSFANDGLGQLGPTLTELRGLIRDLRRVSDKLDNNPARYLLGR 64
Query: 441 EKGSVKIYKPK 451
+ K ++PK
Sbjct: 65 DAP--KEFEPK 73
>gi|312141003|ref|YP_004008339.1| mce family protein mce4f [Rhodococcus equi 103S]
gi|311890342|emb|CBH49660.1| putative Mce family protein Mce4F [Rhodococcus equi 103S]
Length = 417
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 5/112 (4%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ ++ +V R S G+ T++ V + G+PVGR+ L L Q+
Sbjct: 22 IGYVGAKYVRLDTLLGFGEYQVDARFANS-GGIFTNAEVTYRGVPVGRVGDLTLTQDG-- 78
Query: 80 HSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+I P + S A + + G Y++L E + +
Sbjct: 79 -VSVALMIDDSAPQIPASAKAVVANRSAIGEQYVDLQPDTDEGPFLTDGSVI 129
>gi|302523963|ref|ZP_07276305.1| MCE family protein [Streptomyces sp. AA4]
gi|302432858|gb|EFL04674.1| MCE family protein [Streptomyces sp. AA4]
Length = 371
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/361 (8%), Positives = 89/361 (24%), Gaps = 10/361 (2%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
W D + G+V GL +SVR G+ +G + +
Sbjct: 1 MVAGALW---WTLKDAGRNHLTAYFAGAV-GLYEGNSVRMLGVDMGTVTKIQPMGN---Q 53
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
+ A I L YI+L+ I AT R +
Sbjct: 54 VRVDLEYDRSVAVPADAKALIVAPSLVSDRYIQLAPAYTGGPRISDGATIGLDRTEVPLE 113
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+ ++ T + + + + + N + + + +
Sbjct: 114 VDQLAASLAKVSETLGP--NGANKNGSLSDLLNTAANNLDGNGKALHDTITKLGQASGTL 171
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ + F+ + ++ + + + +
Sbjct: 172 AGNKDDLFQTVQNLGKFSQSLANSDGQVRQFESQLADVSGFLAGEKDNLAQTVQQLGTTL 231
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
+ + + K+ + + S ++ + +
Sbjct: 232 QSVQGFIERNRGRLKSNVDKLASVTKVLVDQRSSL-AEILDVAPVALSNIVGVYNGSSGT 290
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFR 380
+ + T + + L +S L + + I+ + + A + + +
Sbjct: 291 LDARPNLNELTAPPLVMVCRLLKQTSVTKQLLGNACDGIAKVVDGVVPLPSAAQVIQAMQ 350
Query: 381 D 381
+
Sbjct: 351 N 351
>gi|239931483|ref|ZP_04688436.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291439859|ref|ZP_06579249.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291342754|gb|EFE69710.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 337
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 35/119 (29%), Gaps = 4/119 (3%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+L + + L+ D + +V G+ S +R G+ VG + +
Sbjct: 1 MLALAVLAAGGLTAVRVLDSDGTRITAYFDRAV-GIYAGSDLRVLGVRVGEVESVRPQGT 59
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
L+ + A + + Y++L+ + A R
Sbjct: 60 T---VRVGLLLDEGVKVPEGARAVVVAPSVVADRYVQLTPAHSTGPALADGAVLPAARN 115
>gi|240168189|ref|ZP_04746848.1| MCE-family protein Mce1A [Mycobacterium kansasii ATCC 12478]
Length = 439
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 37/103 (35%), Gaps = 7/103 (6%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL 71
VV ++ + + P ++ + GL S V +NG+ +GR+ +
Sbjct: 20 VVFLVLALVIFVLVYLQFRGDFTPKVKLTM-FSERA-GLVMDPGSKVTYNGVQIGRVDSI 77
Query: 72 -FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
+ ++ + + P + + A I+ + G Y
Sbjct: 78 SEVTRDGKPAAKFVLNVNPKYLSLVPENVNAQIKATTVFGGKY 120
>gi|326383093|ref|ZP_08204782.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198229|gb|EGD55414.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 417
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/297 (10%), Positives = 88/297 (29%), Gaps = 20/297 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDG 51
M SK V +F + L + + + IP S G
Sbjct: 1 MASKKT---VAVFAAACLIAVPVTAGCSSNTISTVSAVGAAGTSSDAYRITAMIP-SAAG 56
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L ++ V + VG + + +D + + D + + A I + G +
Sbjct: 57 LVRNAPVMMHDATVGSVGDITID---DWSAKVTLRLNGDVKVPVGSHAMIGMTSVLGSS- 112
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + P N ++A+ S +
Sbjct: 113 ---HIAIVPPEHPTGQYLAPGGSLALPNCPEQQNLAQTDAKKVPDITSAQTVDPCMYPTT 169
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + ++ + + + + +D+++ + T S + + + +
Sbjct: 170 EQVLSSLSVVLNGGGLSQMGDVVHELDQIVGGNEGTLKSLIPRLNVLVSDLNSQTENIIS 229
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
L +++ + + ++S +++ + D R+ + + K+ +D
Sbjct: 230 AMEGLDRLSATINRQTPTVQRALESGPKILQLLVDQRKNLTSAMDGVGKLSKTANDV 286
>gi|225024491|ref|ZP_03713683.1| hypothetical protein EIKCOROL_01366 [Eikenella corrodens ATCC
23834]
gi|224942766|gb|EEG23975.1| hypothetical protein EIKCOROL_01366 [Eikenella corrodens ATCC
23834]
Length = 523
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/389 (10%), Positives = 100/389 (25%), Gaps = 33/389 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LS+ S V + I VG + D D + + + + +
Sbjct: 153 LSSGSPVMYRDIVVGIVESAKFDPASKTTDYQIFIGNPNDKLIGSNVRFWLHSGLKIELG 212
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
L + A + ++ + + +
Sbjct: 213 GSGLKVDTPSLPALISGAIAFDDPP----------SGDKGSQVGNNTLFPLYDSRADVDN 262
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + LA K + VT S+N + D ++
Sbjct: 263 QADARSLYYVVFFKQSVRGLAAGAPVEYKGIPIGTVTDVPYFSRNDSLNLFDNGWIPVRI 322
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
++N ++ + ++ ++ ++ ++ L + S
Sbjct: 323 RIDPSRLEINADSQSKEAWADQINRALNKGLSATLSSNNLLTG---------SLFVELSE 373
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI-ENITSNLNDSSQKF 349
++ R+ S + + LN S +
Sbjct: 374 APGQSVLKPAANYQGNTVIASRNGGSLGDLQQQISTLLDKFNRLPLDKTVRELNGSLTEL 433
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+++ N + + L + R + R T + ++ D+Q
Sbjct: 434 KGTLAQANRLLGQPQTQQLPGELNRTLAELRTTLQGVSPQ------------SPVYGDVQ 481
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+R + T+ LN + P +++
Sbjct: 482 KTLRSIDRTLQQAAPVLNTLKEQPNALIF 510
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 7/66 (10%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-------FLDQEYPNHSLAK 84
NQ D ++ SV GL+ + V + GIP+G + + L+ +
Sbjct: 262 NQADARSLYYVVFFKQSVRGLAAGAPVEYKGIPIGTVTDVPYFSRNDSLNLFDNGWIPVR 321
Query: 85 ALIRPD 90
I P
Sbjct: 322 IRIDPS 327
Score = 43.4 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 49/488 (10%), Positives = 124/488 (25%), Gaps = 60/488 (12%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L F + L + GP + + + +G+ +++V + + VGR+ + L
Sbjct: 4 LIPLIALFTGGWLLFDHIRNTGPEVTLYM---SNAEGIEVNNTVIKVLDVDVGRVTAIHL 60
Query: 74 DQEYPNHSL-AKALIRPDTPLYPSTTATI-----------RTQGLAGITYIELSTLRKEK 121
+L A+ + + + L +YI L + +
Sbjct: 61 RPGQEGVALTAQLTGEAKDMVRKDSQFWMVKPRVDQSGITGLSTLVSGSYIALMPGKSPE 120
Query: 122 KTIFQIATE----------------RNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+ + + I ++ S + Y D +
Sbjct: 121 EAREFTVADVPPVSAFAQGGLRLRLKGGSGKILSSGSPVMYRDIVVGIVESAKFDPASKT 180
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
I P I + I + + + S
Sbjct: 181 TDYQIFIGNPNDKLIGSNVRFWLHSGLKIELGGSGLKVDTPSLPALISGAIAFDDPPSGD 240
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ------------- 272
++ + + + + +V +
Sbjct: 241 KGSQVGNNTLFPLYDSRADVDNQADARSLYYVVFFKQSVRGLAAGAPVEYKGIPIGTVTD 300
Query: 273 -TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ ++ + + + S N + + + S
Sbjct: 301 VPYFSRNDSLNLFDNGWIPVRIRIDPSRLEINADSQSKEAWADQINRALNKGLSATLSSN 360
Query: 332 INTIENITSNLNDSSQKF---AELMSKINNISALKENNSLFK---DAQRAMHTFRD---- 381
++ L+++ + + N + A + SL + F
Sbjct: 361 NLLTGSLFVELSEAPGQSVLKPAANYQGNTVIASRNGGSLGDLQQQISTLLDKFNRLPLD 420
Query: 382 -TSEKINRYIPSIGNNLQNFSQ-SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
T ++N + + L ++ G Q L +L T+ L +PQ V+G
Sbjct: 421 KTVRELNGSLTELKGTLAQANRLLGQPQTQQLPGELNRTLAELRTTLQGV--SPQSPVYG 478
Query: 440 REKGSVKI 447
+ +++
Sbjct: 479 DVQKTLRS 486
>gi|16759945|ref|NP_455562.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142283|ref|NP_805625.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62179586|ref|YP_216003.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167554262|ref|ZP_02348003.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|168264746|ref|ZP_02686719.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168821985|ref|ZP_02833985.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194442433|ref|YP_002040267.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|200390936|ref|ZP_03217547.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|213611228|ref|ZP_03370054.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213646602|ref|ZP_03376655.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213857693|ref|ZP_03384664.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|289826797|ref|ZP_06545732.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|25302994|pir||AC0626 probable secreted protein STY1085 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16502239|emb|CAD08190.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29137913|gb|AAO69474.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|62127219|gb|AAX64922.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194401096|gb|ACF61318.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|199603381|gb|EDZ01927.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205321497|gb|EDZ09336.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205341525|gb|EDZ28289.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205346848|gb|EDZ33479.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|320085278|emb|CBY95062.1| Paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|322714055|gb|EFZ05626.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 546
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 92/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 454 LQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/276 (9%), Positives = 75/276 (27%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVF-----N 330
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + I + L + + + + +
Sbjct: 331 DDYRIP--VLVRIEPERLKAQLGENADVGAHLTELLKRG----------------LRASL 372
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + K I T+S+ LA + + + P
Sbjct: 373 KTGNLVTGALYVDLDFYPKEPPITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLP 432
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + NT+++ ++ ++ +D +++Q + + ++ ++ +
Sbjct: 433 LNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQ 492
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L +T N
Sbjct: 493 PGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNA 528
>gi|118473407|ref|YP_884552.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118174694|gb|ABK75590.1| virulence factor Mce family protein, putative [Mycobacterium
smegmatis str. MC2 155]
Length = 524
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 60/191 (31%), Gaps = 6/191 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL V ++ L+ GL+ VR G+ VG +
Sbjct: 13 GLMGVIVVALIIGVGSTLTSVPMLFAVPTYY--GQFADTGGLNIGDKVRIAGMDVGNVKS 70
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ +D + + + + + A IRT + G IE+ E +
Sbjct: 71 MEIDGD---KVVIGYTL-GGRTIGTESRAAIRTDTILGRKNIEIEPRGSETLKPRGVLPV 126
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
A + ++ + A ++ + S + + ++ L+ + + S +
Sbjct: 127 GQTSAPYQIYDAFLDVTRNAAGWDTQAVRQSLNVLSETVDQTSPHLSAALDGVARFSETI 186
Query: 191 ANNISHIDKMM 201
+ K++
Sbjct: 187 GKRDEDVKKLL 197
>gi|16764423|ref|NP_460038.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161614742|ref|YP_001588707.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|167993436|ref|ZP_02574530.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168243852|ref|ZP_02668784.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168467503|ref|ZP_02701340.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194449997|ref|YP_002045066.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|197247437|ref|YP_002145934.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197263120|ref|ZP_03163194.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|198243917|ref|YP_002214997.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205352219|ref|YP_002226020.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856409|ref|YP_002243060.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238911113|ref|ZP_04654950.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|16419579|gb|AAL19997.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|161364106|gb|ABX67874.1| hypothetical protein SPAB_02494 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194408301|gb|ACF68520.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|195630097|gb|EDX48749.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197211140|gb|ACH48537.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197241375|gb|EDY23995.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197938433|gb|ACH75766.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|205272000|emb|CAR36844.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205328561|gb|EDZ15325.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205337243|gb|EDZ24007.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|206708212|emb|CAR32512.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|261246281|emb|CBG24089.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992815|gb|ACY87700.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157608|emb|CBW17100.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912055|dbj|BAJ36029.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321223681|gb|EFX48744.1| Paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323129332|gb|ADX16762.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|326622750|gb|EGE29095.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326627264|gb|EGE33607.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 546
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 92/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 454 LQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/276 (9%), Positives = 75/276 (27%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVF-----N 330
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + I + L + + + + +
Sbjct: 331 DDYRIP--VLVRIEPERLKAQLGENADVGAHLTELLKRG----------------LRASL 372
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + K I T+S+ LA + + + P
Sbjct: 373 KTGNLVTGALYVDLDFYPKEPPITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLP 432
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + NT+++ ++ ++ +D +++Q + + ++ ++ +
Sbjct: 433 LNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQ 492
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L +T N
Sbjct: 493 PGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNA 528
>gi|319950494|ref|ZP_08024407.1| putative Mce family protein [Dietzia cinnamea P4]
gi|319435853|gb|EFV91060.1| putative Mce family protein [Dietzia cinnamea P4]
Length = 363
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 38/108 (35%), Gaps = 5/108 (4%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ + +F+V S + + +G I V L VR G+ V
Sbjct: 16 SFVKLAVFIVVTALLSTVLAVTIRGGTRAEGTGYS---AIFSDVTMLEEGDDVRIAGVVV 72
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
G+I G+ + + + + D L + +R + + G Y+
Sbjct: 73 GQITGMEIH--DRDRAKVDFTLAGDRTLPANVHLALRFRNMIGQRYMN 118
>gi|213425907|ref|ZP_03358657.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
Length = 546
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 92/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 454 LQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/276 (9%), Positives = 75/276 (27%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVF-----N 330
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + I + L + + + + +
Sbjct: 331 DDYRIP--VLVRIEPERLKAQLGENADVGAHLTELLKRG----------------LRASL 372
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + K I T+S+ LA + + + P
Sbjct: 373 KTGNLVTGALYVDLDFYPKEPPITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLP 432
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + NT+++ ++ ++ +D +++Q + + ++ ++ +
Sbjct: 433 LNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQ 492
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L +T N
Sbjct: 493 PGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNA 528
>gi|118619945|ref|YP_908277.1| MCE-family protein Mce6A [Mycobacterium ulcerans Agy99]
gi|118572055|gb|ABL06806.1| MCE-family protein Mce6A [Mycobacterium ulcerans Agy99]
Length = 496
Score = 63.0 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
++++ + + L++S Y +V+ + DGL S V++ GI VG + L
Sbjct: 23 IALVVVLLVTSWLLAKSMGYLDRGVQVVADLRNIGDGLPAGSDVKYRGIQVGTVESLDPS 82
Query: 75 -QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
PN + + + TA + + ++ I+L
Sbjct: 83 IGNQPNQVRIRLKPEYAASIPVTVTARVVPSNVFAVSSIQLVEHGP 128
>gi|15839547|ref|NP_334584.1| virulence factor [Mycobacterium tuberculosis CDC1551]
gi|13879659|gb|AAK44398.1| virulence factor [Mycobacterium tuberculosis CDC1551]
Length = 527
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 74 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 129
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 130 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 189
Query: 108 GITY 111
G Y
Sbjct: 190 GGKY 193
>gi|254454009|ref|ZP_05067446.1| ABC transporter substrate binding protein [Octadecabacter
antarcticus 238]
gi|198268415|gb|EDY92685.1| ABC transporter substrate binding protein [Octadecabacter
antarcticus 238]
Length = 154
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 48/112 (42%), Gaps = 4/112 (3%)
Query: 24 SIYWLSRSNQYDGPMA--EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
++++ + G + ++ S +G+S + +R G+ VG + GL L+ E +
Sbjct: 27 FLWFIGSATGLGGSTSGMDLKANF-RSAEGVSVGTDIRLAGVSVGTVSGLDLNIETYR-A 84
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
A I + + A + ++GL G T++E+ + + + Q
Sbjct: 85 DAIFAIDQGILIPDDSGAVVASEGLLGGTFVEIVPGGSFEMFVDGGLIQDTQ 136
>gi|300783698|ref|YP_003763989.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793212|gb|ADJ43587.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 345
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/263 (11%), Positives = 76/263 (28%), Gaps = 7/263 (2%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ G + G+ S VR G+ +G++ + E I +
Sbjct: 35 FSGSGQHHVTAFFTRAVGVYPGSDVRVLGVRIGQVDAVAPRGE---QVQVDMSIDGSVGV 91
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
TT + + Y++ + + + AT QR ATP ++ ++ +
Sbjct: 92 AEDTTLLVIAPSVVADRYLQFAKPARGGPRLPDGATIPIQRT---ATPVELDQLYASLDT 148
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH-TTQVTPHSSD 212
SK + + + Q + ++ K + N + + + + + +
Sbjct: 149 ISKALGPNGANAQGALSDLLKTGAQNLQGNGRTVNDSVRNFAQLARTLAGNSSDLFGTVS 208
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
F T+ S + Q + N + + + +R+
Sbjct: 209 ELQQFTTMLATNDSQVSNVNQQLAQISGTLAANSGELAQALDGLGRALADVQGFIRDNRG 268
Query: 273 TFQEVGQKIDHLLSDFSSKMKSK 295
+ + + S
Sbjct: 269 ALKANVDNLVTTTRTLVEQRASL 291
>gi|296165587|ref|ZP_06848112.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899060|gb|EFG78541.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 343
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 31/108 (28%), Gaps = 4/108 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
P ++ GL + V G +G++ + D I PL
Sbjct: 4 GEKSVAYCAMFPDTI-GLYAGNPVTQMGYQIGKVTSIAADP---TQVRVDFSITQSRPLP 59
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
P A IR+ + +EL + R + T S
Sbjct: 60 PDVRAVIRSPSILADRSLELVGNYSSGPRLQAGKCIRLDHSFSAKTIS 107
>gi|254773840|ref|ZP_05215356.1| virulence factor mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 475
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/273 (12%), Positives = 76/273 (27%), Gaps = 10/273 (3%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
L + ++ N + G I + + + VR +G+ VG I +
Sbjct: 20 GLILAGAAVLV---RNTFFGQKT--ITAYFTTATAIYPNDEVRVSGVKVGNIKSIEPQG- 73
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA--TERNQR 134
+ + D P+ A I L Y++LS ++ + +
Sbjct: 74 --TQAKMTLKVDHDVPIPADAKAVIVASNLVSARYVQLSPAYRDSGPVMPDGAVIPVERT 131
Query: 135 AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNI 194
A+ + A + K S + + I++ L + L+
Sbjct: 132 AVPVEWDEVKTQLMRLATDLGPKSGVSGTSVGRFIDSAANALDGNGDKLRQTLAQLSGVG 191
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ + + +++ A VN ++ + +
Sbjct: 192 RILANGSGNIVDIIKNLQTFVGALRDSNVQIVQFNDRLATLTSVVNDSKSDLDAALTDLS 251
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ +V + R T + +L D
Sbjct: 252 TAVGEVQRFIAGTRNQTSEQIARLADVTQILVD 284
>gi|239982864|ref|ZP_04705388.1| secreted protein [Streptomyces albus J1074]
gi|291454707|ref|ZP_06594097.1| secreted protein [Streptomyces albus J1074]
gi|291357656|gb|EFE84558.1| secreted protein [Streptomyces albus J1074]
Length = 341
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/265 (8%), Positives = 64/265 (24%), Gaps = 8/265 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
D V +V G+ S +R G+ VG + + +
Sbjct: 26 RLLDAGTTRVTAYFDRAV-GVYAGSDLRVLGVRVGEVESVEPQG---TKVRVGLALDEGV 81
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
L A + + Y++L+ + A R P I+ +
Sbjct: 82 RLPADARAVVVAPSIVADRYVQLAPAYTSGPALKDGAELPASRNRT---PVEIDQLYDSI 138
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ + + + + + + + + + ++
Sbjct: 139 TELATALGPDGANSSGALSGLLDTGAKNLDGNGKLIGESVEQFGKAARTLDGSSEDLFTT 198
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQ-ILENIQVSSNNFVKSSDQVINTVHDVRET 270
++ + L V +N S + + +++
Sbjct: 199 LAQLQVFVTMLKDKDGEVRTAQERLDDVTTFFADNKDDLSGALKELGKALGQVKKFIKDN 258
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSK 295
++ ++ + + S
Sbjct: 259 RGELKKNVDRLAPITQALVDQRASL 283
>gi|183980211|ref|YP_001848502.1| MCE-family protein Mce6A [Mycobacterium marinum M]
gi|183173537|gb|ACC38647.1| MCE-family protein Mce6A [Mycobacterium marinum M]
Length = 496
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
++++ + + L++S Y +V+ + DGL S V++ GI VG + L
Sbjct: 23 IALVVVLLVTSWLLAKSMGYLDRGVQVVADLRNIGDGLPAGSDVKYRGIQVGTVESLDPS 82
Query: 75 -QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
PN + + + TA + + ++ I+L
Sbjct: 83 IGNQPNQVRIRLKPEYAASIPVTVTARVVPSNVFAVSSIQLVEHGP 128
>gi|254774791|ref|ZP_05216307.1| virulence factor mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 489
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/138 (13%), Positives = 44/138 (31%), Gaps = 10/138 (7%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRS--NQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ + + + V + + + + V + +P S GL S V +
Sbjct: 5 NRRTWIQLSILAVVTVVSCGAMAFNFMKLPATLFGIGEYRVTVDLPQS-GGLYQTSVVTY 63
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY----IELST 116
G VG++ + + A +R + A++ ++ G Y T
Sbjct: 64 RGTDVGQVKSVDVTATG---VRAVLAMRSGIEVPFDVQASVHSRSAIGEQYIELTPRPGT 120
Query: 117 LRKEKKTIFQIATERNQR 134
+ +T+ R
Sbjct: 121 GDHQSRTLRDGDVITAGR 138
>gi|254441847|ref|ZP_05055340.1| mce related protein [Octadecabacter antarcticus 307]
gi|198251925|gb|EDY76240.1| mce related protein [Octadecabacter antarcticus 307]
Length = 154
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+ I + M E+ S +G+S + +R G+ VG + GL L+ E
Sbjct: 27 FLWFIVTATGLGGSATGM-ELKANF-RSAEGVSVGTDIRLAGVSVGVVSGLDLNIETYR- 83
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ A I + + A + ++GL G T++E+ +K + E Q
Sbjct: 84 ADAIFAIDQGVSIPDDSAAVVASEGLLGGTFVEIVPGGSFEKFVDGGLIEDTQ 136
>gi|161870518|ref|YP_001599690.1| pqiB protein [Neisseria meningitidis 053442]
gi|161596071|gb|ABX73731.1| pqiB protein [Neisseria meningitidis 053442]
Length = 503
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/388 (7%), Positives = 99/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 127 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 186
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 187 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 246
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 247 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 303
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 304 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSSSPKLR-------- 355
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + + T+ + + L + +
Sbjct: 356 -PHTVYAGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELNGSLAELKSALKSAN 414
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ ++ + ++ + + + R T + ++ D+QN
Sbjct: 415 AALSSIDKLAGNPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 462
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 463 TLQSLDKTLKDVQPVINTLKEKPNALIF 490
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 82/276 (29%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 238 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 297
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 298 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 340
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 341 MIELNDQPSSSPKLRPHTVYAGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELN 400
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+ + ++S+DK+ Q + L ++ DV
Sbjct: 401 GSLAELKSALKSANAALSSIDKLAGNPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 460
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 461 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 496
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 42/428 (9%), Positives = 113/428 (26%), Gaps = 36/428 (8%)
Query: 42 IIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTT 98
+ + S +G+ +++V + I VGR+ + L + A + D + T
Sbjct: 2 VTLLMDSAEGIEVNNTVIKVLSIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQ 60
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ + L TL F + + I + I
Sbjct: 61 FWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLI 120
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ R + + + + I ++ +S
Sbjct: 121 GKNDRILNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESG 180
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ S K+ A ++ + + N + T++D R +
Sbjct: 181 INIETTGSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDR 240
Query: 279 Q--------------------KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
+ L S + + + L + +R I
Sbjct: 241 SLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPS 300
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQ----- 373
R + ++ N ++ + + + + L + S +
Sbjct: 301 RLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVY 360
Query: 374 ---RAMHTFRDTSEKINRYIPSIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
+ T + + + + + + ++ + +L+ + + L++
Sbjct: 361 AGDTVIATQGGGLDDLQAKVVDLLDKFDKLPLDKTVAELNGSLAELKSALKSANAALSSI 420
Query: 430 ER---NPQ 434
++ NPQ
Sbjct: 421 DKLAGNPQ 428
>gi|261344261|ref|ZP_05971905.1| paraquat-inducible protein B [Providencia rustigianii DSM 4541]
gi|282567863|gb|EFB73398.1| paraquat-inducible protein B [Providencia rustigianii DSM 4541]
Length = 549
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/379 (10%), Positives = 96/379 (25%), Gaps = 15/379 (3%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + + + + P ++ +R
Sbjct: 167 SDKAGQLNAGDPVLFRGYRVGSVETSSFDMDKR---DMRYQLFINAPYDKLISSNVRFWK 223
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+GI + S + + NAE
Sbjct: 224 DSGIAFDMSSQGVHVSMGSVATLLTGGVSFDVPQGWIPGDAVKENAEFQLF--------- 274
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+I+ L TT + + + + + + +
Sbjct: 275 -DNQTSIQDSLYTTYQDFVLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYTPGLDQTLD 333
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ I ++ + + + + ++ + +D +
Sbjct: 334 NNFRIPVLIHIEPERFAQDVGKDFNLKNELNLAMKNGLRASLKSGNLLTGALYIDLDFIP 393
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
K + I + +
Sbjct: 394 DVPEYKGPYVIAGYKIIPTHSGGLAQIQQKVIAVLDKINNMPIEPMLKQTTQTLAEGQKL 453
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS--QS 403
Q+ ++ +++N + KE SL +D Q+++ T + P+ + +
Sbjct: 454 VQEANQMFTQLNKLMNSKEFQSLPRDMQKSLQEMNKTMQGFQPGSPAYNKMVDDMQRLDQ 513
Query: 404 GLNDIQNLVRKLQETVNHF 422
L ++Q L+R L N
Sbjct: 514 VLREVQPLLRTLNNKSNAL 532
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/216 (11%), Positives = 59/216 (27%), Gaps = 31/216 (14%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHSLAKALIRP- 89
+ ++ SV GL + V F GI +G + + + I P
Sbjct: 288 YQDFVLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYTPGLDQTLDNNFRIPVLIHIEPE 347
Query: 90 ----------------DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + A++++ L +
Sbjct: 348 RFAQDVGKDFNLKNELNLAMKNGLRASLKSGNLLTGALYIDLDFIPDVPEYKGPYVIAG- 406
Query: 134 RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANN 193
+ A+ K I+ + IE + K T T+A + +
Sbjct: 407 ------YKIIPTHSGGLAQIQQKVIAVLDKINNMPIEPMLKQTTQTLAEGQKLVQEANQM 460
Query: 194 ISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ ++K+M++ + D + + + +
Sbjct: 461 FTQLNKLMNSKEFQSLPRDMQKSLQEMNKTMQGFQP 496
>gi|118465334|ref|YP_881281.1| virulence factor Mce [Mycobacterium avium 104]
gi|118166621|gb|ABK67518.1| virulence factor mce family protein [Mycobacterium avium 104]
Length = 444
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/331 (10%), Positives = 84/331 (25%), Gaps = 9/331 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
L + L + +GL VR G+ VG I +
Sbjct: 12 TALSLVLTLAVASVLVGGKLWRAVEKNSYAAYFAETNGLFVGDEVRILGVAVGAIDKIEP 71
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + A + + L I+L T+ A
Sbjct: 72 QSAGS---KVTFSVDKKYAIPAAARAAVLSPSLVTARAIQLVPAYAGGPTLSPGAAIPLS 128
Query: 134 RAMITATPSGINYFISNAENTSKK-----ISDSSRHIQKIIENIEKPLTTTIANIETIST 188
R + + + + ++ + +N+ T + +S
Sbjct: 129 RTAVPVEWDDFRKQLEKLTDALQPTTAGGVNSVGEFVNSAADNLRGQGDTARDTVLKLSE 188
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ H D + T + + + + + + + + N++ ++
Sbjct: 189 AISALGDHADDIFSTVRNLQLLVSALYSSSDLLASFNTNLAAVTTLLTNTPNEVGSALKS 248
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS-KMKSKETSAFLENIADS 307
D + + T + ++ D + NI
Sbjct: 249 LDGALTDVRDFLAENREAMGVTVDRLGSITTALNDSRGDVKQILHIAPTVFQNFLNIYQP 308
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENI 338
+ + I A+ D Q I S+I
Sbjct: 309 AQSAMTGILALNNFADIPQFICSSIEAASRA 339
>gi|261378864|ref|ZP_05983437.1| paraquat-inducible protein B [Neisseria cinerea ATCC 14685]
gi|269144678|gb|EEZ71096.1| paraquat-inducible protein B [Neisseria cinerea ATCC 14685]
Length = 553
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/393 (7%), Positives = 92/393 (23%), Gaps = 25/393 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + VG++ + + H D ++ ++ + + T
Sbjct: 177 LNVSSPVLYENFMVGQVESAHFNPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + E + + + +
Sbjct: 237 GSGVKLNSVPLPALLSGAISFDSPKTKNQH---HVQNDDRFELYDNRREVENLPDSRSLY 293
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + +N + + I
Sbjct: 294 YTLFFKQSVRGLSAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + S K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTASISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLRAKVADLLDKFNNLPLDKTVAGLNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
++ L T+ +N + P +++
Sbjct: 513 TLQSLDRTLKDVQPVINTLKEKPNALIFNSNSK 545
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D + SV GLS S V + G+ VG + + + D+ + I
Sbjct: 288 DSRSLYYTLFFKQSVRGLSAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTASISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + ++ L + +++ +
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLRAKVADLLDKFNNLPLDKTVAGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDRTLKDVQPVINTLKEKPNALIFNSNSKD 546
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/461 (9%), Positives = 121/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN ++++ ++ W+ V+ + S +G+ + +V +
Sbjct: 17 RKNNTFLSAVWLIPLIALIAGGWLWVKEIRNRG----PVVTLLMNSAEGIEVNKTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
+ VGR+ + L + A + D + T + + L TL
Sbjct: 73 SVDVGRVTRIKLRNDQKG-VEVTAQLNADVSDLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPIAAIGQSGLRLNLIGKNDRILNVSSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + I ++ +S + S K+ +
Sbjct: 192 QVESAHFNPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGVKLNSVPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + ++D R + +
Sbjct: 252 SGAISFDSPKTKNQHHVQNDDRFELYDNRREVENLPDSRSLYYTLFFKQSVRGLSAGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTASISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLRAKVA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + N + + + +L+ T+ + L++ ++
Sbjct: 432 DLLDKFNNLPLDKTVAGLNGSLAELKSTLKSANAALSSIDK 472
>gi|56413939|ref|YP_151014.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197362862|ref|YP_002142499.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|56128196|gb|AAV77702.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|197094339|emb|CAR59851.1| putative secreted protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
Length = 546
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 91/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I + + L D Q + + + + N +
Sbjct: 454 LQTTLDNMNKIISSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/260 (10%), Positives = 69/260 (26%), Gaps = 13/260 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVFNDDYRI 335
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I P+ L + + A + P
Sbjct: 336 PVLVRIEPE-RLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEPP 394
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
E S ++ Q+++E ++K + + +T + + +
Sbjct: 395 ITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRRL 454
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
TT + S + + + + + + + N V ++
Sbjct: 455 QTTLDNMNKIISSQSMQQLPADMQTTLRELNRSMQGFQPGSA-----AYNKMVADMQRLD 509
Query: 262 NTVHDVRETTQTFQEVGQKI 281
+ +++ +T E +
Sbjct: 510 QVLRELQPVLKTLNEKSNAL 529
>gi|296165085|ref|ZP_06847638.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899578|gb|EFG79031.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 438
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 39/105 (37%), Gaps = 8/105 (7%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIV 69
V I+ WL + P ++ + P GL S V +NG+ +GR+
Sbjct: 22 ALVFLIVSAVVLGFVWLQFRGRL-TPTTQLTMLAPR--AGLVMDPGSKVTYNGVEIGRVA 78
Query: 70 GL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ ++++ + + P + + A I+ + G Y
Sbjct: 79 SISEIERDGTPAARFVLNVNPKWIELIPSNVDANIKATTVFGNKY 123
>gi|261365529|ref|ZP_05978412.1| paraquat-inducible protein B [Neisseria mucosa ATCC 25996]
gi|288565947|gb|EFC87507.1| paraquat-inducible protein B [Neisseria mucosa ATCC 25996]
Length = 553
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 95/388 (24%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + VG++ + + H D + + + + T
Sbjct: 177 LNVSSPVLYENFMVGQVESAHFEPADQTVHYTIFIQSPNDKLINSESRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + +N S+ +
Sbjct: 237 GSGVKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDNRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLT---AGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRME 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + K+
Sbjct: 354 INADEQSKEHWKQQFQAALGKGLTATISSNNLITGSKMIELNDQPSSSPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 406 -PHTIYAGDTVIATQGGGLDDLQAKVADLLEKFNNLPLDKTVAGLNGSLTELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ +D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYSDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLRDVQPVINTLKEKPNALIF 540
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------MEINADEQSKEHWKQQFQAALGKGLTATISSNNLITGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L +++ +
Sbjct: 391 MIELNDQPSSSPKLRPHTIYAGDTVIATQGGGLDDLQAKVADLLEKFNNLPLDKTVAGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLTELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYSDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLRDVQPVINTLKEKPNALIFNSSSKD 546
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/449 (9%), Positives = 117/449 (26%), Gaps = 36/449 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L + L + + GP+ +++ S +G+ +++V + + VG + + L
Sbjct: 28 LIPLIALIAGGWLLVKDIRNRGPVVTLLM---DSAEGIEVNNTVIKVLNVDVGHVTRIKL 84
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ A + D + T + + LSTL F
Sbjct: 85 RDDQKG-VEVTAQLNADAKDLIRSDTQFWVVKPRIDQSGVTGLSTLLSGSYIAFTPGKSN 143
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + I + K + + + + + +
Sbjct: 144 ETKDVFEVQDIPPIAAIGQSGLRLKLVGQNDKILNVSSPVLYENFMVGQVESAHFEPADQ 203
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
I ++ S + S K+ A ++ + +
Sbjct: 204 TVHYTIFIQSPNDKLINSESRFWLESGINIETTGSGVKLNSAPLPALLSGAISFDSPKTK 263
Query: 252 NFVKSSDQVINTVHDVRETTQTFQE---------VGQKIDHLLSDFSSKMKSKETSAFLE 302
N + T++D R + Q + L + + K +
Sbjct: 264 NSKNVKSEDSFTLYDNRSEVANLPDDRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSD 323
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA---ELMSKI--- 356
++ R + + + + A L + I
Sbjct: 324 VPYFDRNDSLHLFENGWIPVRIRIEPSRMEINADEQSKEHWKQQFQAALGKGLTATISSN 383
Query: 357 -----NNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIPSIGNNLQNF-SQ 402
+ + L + S + + T + + + + N
Sbjct: 384 NLITGSKMIELNDQPSSSPKLRPHTIYAGDTVIATQGGGLDDLQAKVADLLEKFNNLPLD 443
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + +L+ T+ + L++ ++
Sbjct: 444 KTVAGLNGSLTELKSTLKSANAALSSIDK 472
>gi|219555967|ref|ZP_03535043.1| MCE-family protein mce1A [Mycobacterium tuberculosis T17]
Length = 464
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 1 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 56
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 57 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 116
Query: 108 GITY 111
G Y
Sbjct: 117 GGKY 120
>gi|325205612|gb|ADZ01065.1| paraquat-inducible protein B [Neisseria meningitidis M04-240196]
Length = 553
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/388 (8%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + A + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/461 (9%), Positives = 120/461 (26%), Gaps = 38/461 (8%)
Query: 4 KNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
+ T + + ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTLLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 432 DLLDKFDKLPLDKTVAELNGSLAELKSTLKSANAALSSIDK 472
>gi|54023087|ref|YP_117329.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014595|dbj|BAD55965.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 318
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 13/113 (11%), Positives = 27/113 (23%), Gaps = 3/113 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
++ + + + + GL S + GI VG + +
Sbjct: 12 IAAIMILGAAYLAFGVVRVDPFAEHTEATMVLRNSGGLGVGSPILLTGIEVGEVTAVR-- 69
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ D L + TI G Y++ +
Sbjct: 70 -ATDAGVEVGFRVDGDHRLPVDSVVTIEHLSALGEPYVQFVPKAAGGPYLRDG 121
>gi|300789436|ref|YP_003769727.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299798950|gb|ADJ49325.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 332
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/316 (13%), Positives = 92/316 (29%), Gaps = 16/316 (5%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
++ S W + +V G+ DS VR G+ +G + + +
Sbjct: 24 GVVLALMVSAAW---PIATAPRERTLTAYFAAAV-GIYPDSDVRVLGVAIGSVSKVEPNG 79
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+RP PL A + T L Y++L+ + + + A+ +R
Sbjct: 80 TD---VKVTMTLRPGVPLPADAGAVVITPSLVADRYVQLTPVYRGGPQLAGGASIPRERT 136
Query: 136 MITATPSGINYFISNAENTSKKISDSSR---------HIQKIIENIEKPLTTTIANIETI 186
+ + ++ + + + + T E
Sbjct: 137 ATPVEVDDLLHSLNQLMSALGPQGANKDGAVSDVLTRSADYLNGTGKTIGTAIKNLGEFA 196
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T + + + + ++ T + + I SL K++ Q + E
Sbjct: 197 RTASDSKDDLFNSVDNISKFTAMLAANDGQVKQAISQIASLSKVLADQRDQFSGALTELT 256
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
Q S D DV + + + + D L + + + A+
Sbjct: 257 QALSVVQGFIKDNRGKVQSDVDKLADVTKVLVNQKDSLAEALDAAPNALTNLLGAYDQAN 316
Query: 307 STSNMRSSISAIREIT 322
T + R ++ E
Sbjct: 317 GTIDGRGNLLEFAEPK 332
>gi|269128024|ref|YP_003301394.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268312982|gb|ACY99356.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 344
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 34/100 (34%), Gaps = 4/100 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D E+ +R S V+ G+ VGR+ + +H + +R D PL
Sbjct: 30 DSGRREMTVRFTK-ARSFYPGSKVKIMGVDVGRVDSVR---NRGDHIEVRFHVRSDIPLP 85
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A+I L G + L K + +R
Sbjct: 86 KGVRASIVPLNLVGERNLVLHPAWKPGQPKETGNEIPIER 125
>gi|41406664|ref|NP_959500.1| hypothetical protein MAP0566 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395013|gb|AAS02883.1| hypothetical protein MAP_0566 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 354
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ P ++ G++ ++V +G+ VG++ + L + + +
Sbjct: 30 FGYAGLPFWPQGKIYDAYFTDAGGINPGNAVYVSGLKVGKVTDVGLAGDS---AKISFSV 86
Query: 88 RPDTPLYPSTTATIRTQGLAGIT 110
+ + A IRT + G
Sbjct: 87 DRHVAVGDQSLAAIRTDTILGER 109
>gi|240168191|ref|ZP_04746850.1| MCE-family protein Mce1C [Mycobacterium kansasii ATCC 12478]
Length = 472
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/243 (12%), Positives = 72/243 (29%), Gaps = 4/243 (1%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
GL+ VR G+ VG++ L +D + H K + + + + IRT
Sbjct: 46 FTDTGGLNKGDKVRIAGMDVGKVEELSIDGD---HVKIKFSVGTNV-IGTESRLAIRTDT 101
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+ G +E+ + + + + + S +
Sbjct: 102 ILGKKVLEIEARGNQPLRPGGTLPLGQSTTPYQIYDAFFDVTKAATGWDIDTVKQSLHVL 161
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ I+ L+ T+ + S + I ++ ++ +
Sbjct: 162 SQTIDQTYPHLSATLEGVAKFSDTIGKRDEEIKHLLAQANQVASILGDRSQQVDRLLVNA 221
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ +L NI S + N H + + Q + ++ D L
Sbjct: 222 KTLIAAFNERGRAIDALLGNIASFSAQVQGLINDNPNLNHVLEQLRQVSDILVERKDDLA 281
Query: 286 SDF 288
+
Sbjct: 282 NGL 284
>gi|118464170|ref|YP_879939.1| virulence factor Mce [Mycobacterium avium 104]
gi|118165457|gb|ABK66354.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 354
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 30/83 (36%), Gaps = 3/83 (3%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ P ++ G++ ++V +G+ VG++ + L + + +
Sbjct: 30 FGYAGLPFWPQGKIYDAYFTDAGGINPGNAVYVSGLKVGKVTDVGLAGDS---AKISFSV 86
Query: 88 RPDTPLYPSTTATIRTQGLAGIT 110
+ + A IRT + G
Sbjct: 87 DRHVAVGDQSLAAIRTDTILGER 109
>gi|23013309|ref|ZP_00053219.1| COG1463: ABC-type transport system involved in resistance to
organic solvents, periplasmic component
[Magnetospirillum magnetotacticum MS-1]
Length = 75
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M T +G V+ + F Y + + +G E+ SV GL T + V+
Sbjct: 1 MGRNLIETIMGAVVLGVAGFFLVFAYTHANLKKIEG--YEISATF-ASVGGLDTGADVKI 57
Query: 61 NGIPVGRIVGLFLDQ 75
NGI VG +
Sbjct: 58 NGIKVGTVAAQSPGP 72
>gi|296138967|ref|YP_003646210.1| hypothetical protein Tpau_1240 [Tsukamurella paurometabola DSM
20162]
gi|296027101|gb|ADG77871.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 320
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/324 (8%), Positives = 89/324 (27%), Gaps = 11/324 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K+ + S+ F + ++ + + + + + + L SSV
Sbjct: 1 MK-KSTFFSLLTFALVMVLGTGYIAFSVLNWRPLT--DYKAATLKLNDANQLLKGSSVLL 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + + + + +T I G Y++
Sbjct: 58 RGVKVGDVQSIE---RRDGKVEIRLRYDGKYQIPQATGLKIEQLSAVGEPYVDFMPDSLN 114
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ A + I+ S +S + + + + + T
Sbjct: 115 GPYLSDGAVIDTAKVKEPLPLPETFKLIAGLT-----SSINSTDLGGVTTTLAQATSNTQ 169
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
++ I + I M + ++ + + A + K
Sbjct: 170 GSLPNIESAGNILAQTIMARMPNIRRMLENTQNYQSDMAWLPDSLREFGPATATFVTKDV 229
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++L+ + + N + + + ++ + + +++
Sbjct: 230 EVLKALDILMNGSGSPDVLTNSINPYLFKIAPDVSKLLSNLGTINEPLVPVVQALTDVMP 289
Query: 301 LENIADSTSNMRSSISAIREITDQ 324
++A S ++ + +
Sbjct: 290 QIDVAALLSQALKTVGSDGQANLT 313
>gi|157369989|ref|YP_001477978.1| paraquat-inducible protein B [Serratia proteamaculans 568]
gi|157321753|gb|ABV40850.1| Mammalian cell entry related domain protein [Serratia
proteamaculans 568]
Length = 548
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/454 (8%), Positives = 101/454 (22%), Gaps = 40/454 (8%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEV--------------IIRIPGSVDG-LSTD 55
G+ + L + + ++ I + G L+
Sbjct: 116 GVSGLGTLLSGAYIELQPGNKGKAGKGDYQLLDAPPLASPDAKGLRIVLDSERSGQLNAG 175
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
V F G VG + + D + + + P T+ +R +G+ + +
Sbjct: 176 DPVLFRGYRVGSVETSYFDPKMRA---MRYQLFISAPYDQLVTSNVRFWKDSGVAFDMSA 232
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + AE S + +
Sbjct: 233 QGMRVEMGSLATLFSGGVSFDVPDGWDRGELAQPKAEYHLFDNQRSIQDSLYTVHKD--- 289
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + + + + ++ I
Sbjct: 290 -------YLLFFADSVRGLQPGAPVEFRGIRLGTVGQVPFYKKGMIQRLDNDYRIPVLIR 342
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ + + ++ + +D + K +
Sbjct: 343 IEPDRFQKQLGGNFDFESHLKDAESRGMRASLKSANLLTGSLYIDLDFYPQEKPYKGPRE 402
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
L + IN + + + + M
Sbjct: 403 LFGYRLMPTTSGGLAQIQQKLMQTLDKINSMPLNPMINEATKTLAESQKTMKSTQQTMQS 462
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+N+I A KE +L +D Q+ + + + N + +++L
Sbjct: 463 LNDIIASKEMKALPQDMQKTLQELNRSMKGFQP------------GSPAYNKMVGDMQRL 510
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ + L +V+ + K
Sbjct: 511 DQVLRELQPVLRTLNEKSNALVFEAAGSNDPQPK 544
>gi|145220614|ref|YP_001131292.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213100|gb|ABP42504.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 345
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/273 (14%), Positives = 89/273 (32%), Gaps = 7/273 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + + L + V GIPVG + + L + H A+ +R D L
Sbjct: 42 DVGYRTFTAQFLQAAA-LQPGNPVSVAGIPVGEVTDMKLAGD---HVEARFTVRNDVDLG 97
Query: 95 PSTTATIRTQGLAGITY---IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ A I+ + G Y T + TE T + ++
Sbjct: 98 EDSRAVIKVTTILGSRYLSLEPEGTGALPDRHFDLSHTEVPYDLQEALTDVTTTFEQVDS 157
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++ +S R +Q + E + + L T I+ S ++ +
Sbjct: 158 DKFAETLSILGRQLQGMPEILPQALENTHTLSTIIADRRDQLGSLLETTEVVSNTLRRQQ 217
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + + + + +A +N I +Q + ++ ++ + +VRE +
Sbjct: 218 ANIGSLVRQGNDLVGEFVLRRASFQAMMNAITNLVQTLGDIVIEDRPELEALLVNVRELS 277
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + +L ++ + + N
Sbjct: 278 DMLGQHDDLLRSILQSGPPALRGLANATGMGNA 310
>gi|254362424|ref|ZP_04978533.1| ABC superfamily ATP binding cassette transporter, binding protein
[Mannheimia haemolytica PHL213]
gi|261494093|ref|ZP_05990596.1| ABC superfamily ATP binding cassette transporter, binding protein
[Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496066|ref|ZP_05992476.1| ABC superfamily ATP binding cassette transporter, binding protein
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|153094013|gb|EDN74929.1| ABC superfamily ATP binding cassette transporter, binding protein
[Mannheimia haemolytica PHL213]
gi|261308316|gb|EEY09609.1| ABC superfamily ATP binding cassette transporter, binding protein
[Mannheimia haemolytica serotype A2 str. OVINE]
gi|261310259|gb|EEY11459.1| ABC superfamily ATP binding cassette transporter, binding protein
[Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 174
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 45/113 (39%), Gaps = 2/113 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLFV+ L F ++ + + ++ GL + ++ G+ VG
Sbjct: 8 EFWVGLFVLLGLAALVFLGLRVANVQGFSNEKTYTLYATFDNIGGLKVRAPIKVGGVVVG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
R+ + LD + + + +++ +I+T GL G Y+ L+
Sbjct: 68 RVADISLDNKTYTP-KVALAVNESFNQIPDTSSLSIKTSGLLGEQYVALNVGF 119
>gi|89069295|ref|ZP_01156658.1| paraquat-inducible protein, putative [Oceanicola granulosus
HTCC2516]
gi|89045171|gb|EAR51239.1| paraquat-inducible protein, putative [Oceanicola granulosus
HTCC2516]
Length = 1295
Score = 62.6 bits (149), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/404 (9%), Positives = 121/404 (29%), Gaps = 22/404 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD------QEYPNHSL 82
S DG +V GL ++S+ + GI +GR+ + +
Sbjct: 284 SLFGDDDGGTLTFTAIFDQNVAGLIPNASIDYGGIQIGRVESINGIVSEARFGDSRVRLA 343
Query: 83 AKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
+RP L T+ R + ++ + + A P
Sbjct: 344 VTMQVRPARLGLDDDTSVEEALAFFQSRVRDNGLRARLVRGSLLTGGLKVELATIENAEP 403
Query: 142 SGIN---YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
+ I+ +I+D + + ++E I + + ++ +
Sbjct: 404 AEIDLDAEPNPIFPTVPSEIADMTASAEGVLERISALPIEEVLQSAIDTMDSITALAASE 463
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
M ++ ++ A+ N + ++ + + D
Sbjct: 464 DMRQVPAEVRALLGDARGIVGSEEMQALPVRVESAVAELDALLATLNEEEAAVRLLAAVD 523
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
+ +V + + + Q + L ++ + ++ + +A + + +
Sbjct: 524 SLAAAADEVTASAEDVPALVQNLTTLTANAAEVPLAELAAQLDALLASADGLISGEAAQA 583
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
+ ++L + + +++ +N+ A + + +D A
Sbjct: 584 LP------------ANLNAAITDLRGTLDEVDTIVATLNDQDAAGQMLAAVEDVTAAAAA 631
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
+++ + I ++ ++ S+ L ++ + L +
Sbjct: 632 LAESANDLPALIAAVTEVAESASEVPLPELAANLDTLLVNADAL 675
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/203 (8%), Positives = 54/203 (26%), Gaps = 9/203 (4%)
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + V D S+ A
Sbjct: 1093 EQLRTTLAEVDTLVTGLNEDDASARLLAAVDEVAAAAGTLSTSAAGVPALIDRLNAIAAT 1152
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+ ++ + + +L + + +++++ + ++ N
Sbjct: 1153 AEELPLEQVADQLSSLLATVDAMLGTEGARRLPESLAAALDQLRLVLAELQSGGVVENVN 1212
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS---------QSGLNDIQNLVRKLQE 417
+ A+ A + + ++ + + G L + + +R++++
Sbjct: 1213 ATLTSARSAAESIGNAADSLPALLGRTGALLDQAAVTLGEYGTDDGVGRSLAQTLREVEQ 1272
Query: 418 TVNHFDDCLNNFERNPQDIVWGR 440
ERNP +++GR
Sbjct: 1273 AAAAISSLARELERNPNSLLFGR 1295
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 35/387 (9%), Positives = 102/387 (26%), Gaps = 10/387 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L+ + + F GI VGR+ + ++ T T+ +
Sbjct: 176 LADRAPIEFRGIEVGRLGTAVVSEDGS-----TVEADAIIYAPHDRLVTTATRFWDTSGF 230
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ +A+ SG A + ++R ++
Sbjct: 231 AFTIDAGGAELNFSSLASLFAGGISFGTVVSGGRPVEPGAVFSVYYDEATARASLFGDDD 290
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
T I + + +I + + + ++ L ++
Sbjct: 291 GGTLTFTAIFDQNVAGLIPNASIDYGGIQIGRVESINGIVSEARFGDSRVRLAVTMQVRP 350
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD-VRETTQTFQEVGQKIDHLLSDFSS 290
+ L + E + + + + + + + + D +
Sbjct: 351 ARLGLDDDTSVEEALAFFQSRVRDNGLRARLVRGSLLTGGLKVELATIENAEPAEIDLDA 410
Query: 291 KMKSKE--TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIE-NITSNLNDSSQ 347
+ + + ++ S + ISA+ + I + + + ++
Sbjct: 411 EPNPIFPTVPSEIADMTASAEGVLERISALPIEEVLQSAIDTMDSITALAASEDMRQVPA 470
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG-NNLQNFSQSGLN 406
+ L+ I +E +L + A+ +N ++ + + +
Sbjct: 471 EVRALLGDARGIVGSEEMQALPVRVESAVAELDALLATLNEEEAAVRLLAAVDSLAAAAD 530
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNP 433
++ + V + N P
Sbjct: 531 EVTASAEDVPALVQNLTTLTANAAEVP 557
>gi|326333397|ref|ZP_08199643.1| MCE family protein [Nocardioidaceae bacterium Broad-1]
gi|325948793|gb|EGD40887.1| MCE family protein [Nocardioidaceae bacterium Broad-1]
Length = 487
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/415 (10%), Positives = 124/415 (29%), Gaps = 9/415 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VG +++ L V + ++D L S+V+ I VG+
Sbjct: 11 VLVGALMLTGCGSFSVYDLPLPGGVDAGDDAISVTAQFQDTLD-LVPQSTVKLEDIDVGK 69
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
I ++LD + + L++ D L +T A+I+ L G ++ L + + T
Sbjct: 70 INKIWLD---DGVATVEMLLKKDVDLPANTRASIQQTSLLGEKFVSLERPAEPESTKLTD 126
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + + ++ ++ + + + + + +
Sbjct: 127 GSTIPLAQTGRNPEIEEVFSALSLLLNGGGVAQLKTISTELNKALAGREDSARSVLHQVE 186
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ + ++ +K++ + + + N D + ++ +++ ++
Sbjct: 187 KLARDLDNNKEKIVAAIEALDALAKATNAQMGSIDAALDELPSAISSIDKQRADLVKMLE 246
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + + + + + + DF M + T F + +
Sbjct: 247 ALERLGDTGVRVIRASKDNTIGIVKDLRPLLSNLADAGDDFVKAMNTILTYPF---VDQA 303
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ + + +N + + S L +IN +
Sbjct: 304 VGGSPQTARNLHMGDFVNLDVTVDLNLDTLLQNAPRVGSAACWGL-EEINRKIKTFPDEE 362
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
D + + I + L S + + ++ + +T++
Sbjct: 363 TALDWLNNLTNVCKE-GGLASAIDTCQEALTGQSTAPQACVTGVLGSIGKTLDGL 416
>gi|183984675|ref|YP_001852966.1| MCE-family protein [Mycobacterium marinum M]
gi|183178001|gb|ACC43111.1| MCE-family protein [Mycobacterium marinum M]
Length = 475
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/325 (11%), Positives = 83/325 (25%), Gaps = 9/325 (2%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ P + VR +G+ VG I + D + + +
Sbjct: 32 LRNTFFRPTTITAYFPT-ATAIYPGDDVRVSGMKVGTIAAIRPDG---TKAKMILHVDHN 87
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF-QIATERNQRAMITATPSGINYFIS 149
P+ A I Q L Y++L+ + + A +R A P +
Sbjct: 88 VPIPADAKAVIVAQNLVAARYVQLTPAYRSSGPVMADGAVIPIERT---AVPVEWDEVKD 144
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ ++ +S+ I + N +
Sbjct: 145 QLMRLATELGPNSKVSSPSISRFIDSAADALGNGNGDKLRQTLAELSGVGRILANGSGNI 204
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
KN I L S ++++ D + + S + +D R
Sbjct: 205 VDIIKNLQTFIGALRDSNVQIVQFNDRLASLTSVLDDNKSDLDA-ALTDLSSAVGEVQRF 263
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ ++I L + +K + ++ + + + I
Sbjct: 264 IAGSRDATAEQITRLADLTQILVDNKMALKNVLHVTPNALANAYNDYDPDVGNVRGGVGI 323
Query: 330 STINTIENITSNLNDSSQKFAELMS 354
+ + + + + S
Sbjct: 324 QNLTNPVFSICSQLGAMENVTSVES 348
>gi|311280147|ref|YP_003942378.1| Mammalian cell entry related domain-containing protein
[Enterobacter cloacae SCF1]
gi|308749342|gb|ADO49094.1| Mammalian cell entry related domain protein [Enterobacter cloacae
SCF1]
Length = 552
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/263 (12%), Positives = 75/263 (28%), Gaps = 19/263 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S ++ + ++ SV GL + V F GI +G + +
Sbjct: 282 SIADSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVDKVPFFPPGMRQKLNDDYRI 341
Query: 82 LAKALIRPD---TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
I P+ L T L G + ++ A +
Sbjct: 342 PVLIRIEPERLKAQLGEDTEVGEHLNELLG----RGLRGSLKTGSLVTGALFIDLDFYPK 397
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
A P N + ++ Q+++E ++K + + T +T +
Sbjct: 398 AEPVKGNPSFAGYGIIPTVSGGLAQIQQRLMEALDKINNLPLNPLLTQATNTLSESQKTM 457
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ M TT + + + + + S + + + N V
Sbjct: 458 QRMQTTLDNLNKITASQSMQQLPADMQSTLRELNRSMQGFQPGSA-----AYNKMVADMQ 512
Query: 259 QVINTVHDVRETTQTFQEVGQKI 281
+ + +++ +T + +
Sbjct: 513 SLDQVLRELQPVLKTLNDKSNAL 535
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/412 (9%), Positives = 97/412 (23%), Gaps = 28/412 (6%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ + + + G LS V F G VG + D + +
Sbjct: 164 IRVILDSNKAGQLSPGDPVLFRGYRVGSVETSSFDPKKR-----TISYQLFINAPNDRLV 218
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
T + T + + + T + P G++ AE T +
Sbjct: 219 TTNVRFWKDSGIAVDLTSAGMRVEMGSLTTLFGG-GVSFDIPDGLDLGQPVAEKTEFTLY 277
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
D + +I L T + + +
Sbjct: 278 DDQK-------SIADSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVDKVPFFPPG 330
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ + ++ I ++ + + + + ++ + +
Sbjct: 331 MRQKLNDDYRIPVLIRIEPERLKAQLGEDTEVGEHLNELLGRGLRGSLKTGSLVTGALFI 390
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+D K + + + N
Sbjct: 391 DLDFYPKAEPVKGNPSFAGYGIIPTVSGGLAQIQQRLMEALDKINNLPLNPLLTQATNTL 450
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
S + Q+ + +N I+A + L D Q + + +
Sbjct: 451 SESQKTMQRMQTTLDNLNKITASQSMQQLPADMQSTLRELNRSMQGFQP----------- 499
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + ++ L + + L +V+ E K +PK
Sbjct: 500 -GSAAYNKMVADMQSLDQVLRELQPVLKTLNDKSNALVF--EAKDKKDPQPK 548
>gi|183984953|ref|YP_001853244.1| MCE-family protein Mce4C [Mycobacterium marinum M]
gi|183178279|gb|ACC43389.1| MCE-family protein Mce4C [Mycobacterium marinum M]
Length = 353
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ G++ ++V +G VG + + L + + + +
Sbjct: 36 FLPQGKTYNAYFSD-AGGITPGNNVYVSGFKVGTVSDVSLAGD---AAKITFSVDRHVVV 91
Query: 94 YPSTTATIRTQGLAGIT 110
+ A IRT + G
Sbjct: 92 GDQSLAAIRTDTILGER 108
>gi|87300536|ref|ZP_01083378.1| hypothetical protein WH5701_03790 [Synechococcus sp. WH 5701]
gi|87284407|gb|EAQ76359.1| hypothetical protein WH5701_03790 [Synechococcus sp. WH 5701]
Length = 290
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/99 (22%), Positives = 39/99 (39%), Gaps = 1/99 (1%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
L V+ L F + + R + G + R + G+ V +G VGR+ +
Sbjct: 28 LVVLGALVFGTWIVAGALRQQAWLGSSFALRFR-TDNATGIWPGVHVTISGYRVGRVESV 86
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L + + R + P+T AT+ +GL G +
Sbjct: 87 QLGPDGGVLVDLRIAERYQPLVGPATRATVYQEGLIGSS 125
>gi|325204633|gb|ADZ00087.1| paraquat-inducible protein B [Neisseria meningitidis M01-240355]
Length = 553
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/388 (8%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTVG---SPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + A + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATRGGGLDDLQVKLADLLDKFDKLPLDKTVAELNGSLTELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLADLLDKFDKLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLTELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 45/461 (9%), Positives = 122/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 432 DLLDKFDKLPLDKTVAELNGSLTELKSTLKSANAALSSIDK 472
>gi|157963421|ref|YP_001503455.1| hypothetical protein Spea_3607 [Shewanella pealeana ATCC 700345]
gi|157848421|gb|ABV88920.1| Mammalian cell entry related domain protein [Shewanella pealeana
ATCC 700345]
Length = 156
Score = 62.3 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VGLF++S L ++ ++ G + + ++ GL S V+
Sbjct: 1 MLTRKIEILVGLFLLSGLAAFLVLVFNVANVEVKSGDSSYTLYAKFSNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD E + ++T +I T GL G ++ L+
Sbjct: 61 GGVVVGRVSAINLDPEKLIPV-VTIAMDKRYHYFPETSTLSILTSGLLGEQFLGLTPGFM 119
>gi|226503383|ref|NP_001151158.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Zea mays]
gi|195644692|gb|ACG41814.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Zea mays]
Length = 362
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 81/272 (29%), Gaps = 8/272 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS ++ WL + G+ + VR G+ VG +V
Sbjct: 80 VGLFMVSGAALLALALAWLRGFQLRSRFRKYNTVFEFTQACGICVGTPVRIRGVTVGSVV 139
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ A + D + ++ + GL T I+++ + +
Sbjct: 140 RVD---SSLRSIDATVEVEDDKIIIPRNSMVEVNQSGLLMETLIDITPKDP----LPAPS 192
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + E ++ + E +++
Sbjct: 193 VGPLDPDCTKEGLILCDKERMKGQQGVSLDALVGIFTRLGRDMEEIGVSKSYKLAEKVAS 252
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ + ++ + N + + D+ T + A + +
Sbjct: 253 IMEEAQPLLTRIEALAEEMQPLLSEVNDSDLLKDVETIAKGLADASGDLRRLKSSMLTPE 312
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+++ +S +I T+ ++ +
Sbjct: 313 NTDLIKQSIFTLIFTLKNIESISSDISGFTGD 344
>gi|183983844|ref|YP_001852135.1| Mce family protein Mce5F [Mycobacterium marinum M]
gi|183177170|gb|ACC42280.1| Mce family protein Mce5F [Mycobacterium marinum M]
Length = 416
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/126 (17%), Positives = 46/126 (36%), Gaps = 5/126 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ SV V++++ + + + R + V + +P S GL + V G+ +
Sbjct: 21 TWLSVAGLVLTLVVAAAYLLVGALRLTPFAS-SYRVTVSLPES-GGLLPNQDVALRGVRI 78
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
GRI L + + A A I + S+ + AG +++ +
Sbjct: 79 GRIESLHITESG---VDAIASITSQVKIPASSAVHVSALSPAGEQFLDFEPESDTGPYLG 135
Query: 126 QIATER 131
+ A
Sbjct: 136 EGAVIG 141
>gi|193215871|ref|YP_001997070.1| mammalian cell entry related domain-containing protein
[Chloroherpeton thalassium ATCC 35110]
gi|193089348|gb|ACF14623.1| Mammalian cell entry related domain protein [Chloroherpeton
thalassium ATCC 35110]
Length = 358
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/359 (13%), Positives = 109/359 (30%), Gaps = 9/359 (2%)
Query: 1 MESKNYYT--SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ K YT VG FV++ L F ++ +N+ + +V GL+T + +
Sbjct: 1 MKFKFKYTDKIVGGFVLTALLTVVFIAIIVAINNKVFVKKYVFKTQFTDAV-GLTTTTPI 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
F G +GRI L++ + + + +T L G T I L
Sbjct: 60 IFKGFEIGRIRSYKLNERDMIDADFEIYEEYRDRIKTNTVLHKARNILGGSTTINLFQGE 119
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ K + + M + + + +++ + K+ +
Sbjct: 120 VQGKLTEEKGFVPSLNTMEGNERIEQYKIKMSGDAIASVLANFDNLLYKLTNENNYEKSA 179
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++ S + + + + K ++ + + +A
Sbjct: 180 LFKTLDNFSLASEQLVYLLTDVEKIVKKLEADPQLKGGGTLVSAVQNISNLTQEAAVTIN 239
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDV------RETTQTFQEVGQKIDHLLSDFSSKM 292
+ S K+ D ++ + D + ++ QE+ +D L S
Sbjct: 240 QLNHTLALTDSLLLAYKNPDGLVRKMVDPTGEEIFKPLDKSLQEMAGSLDKLNRLLSYID 299
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L + A +T + I+ +E + + + E
Sbjct: 300 AKTPETLILVDEAKATLKQTRRTMEGISNNPFIRGGITPERVVEPAGEKVRMNINEVIE 358
>gi|118619250|ref|YP_907582.1| MCE-family protein Mce4C [Mycobacterium ulcerans Agy99]
gi|118571360|gb|ABL06111.1| MCE-family protein Mce4C [Mycobacterium ulcerans Agy99]
Length = 353
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 11/77 (14%), Positives = 25/77 (32%), Gaps = 4/77 (5%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ G++ ++V +G VG + + L + + + +
Sbjct: 36 FLPQGKTYNAYFSD-AGGITPGNNVYVSGFKVGTVSDVSLAGD---AAKITFSVDRHVVV 91
Query: 94 YPSTTATIRTQGLAGIT 110
+ A IRT + G
Sbjct: 92 GDQSLAAIRTDTILGER 108
>gi|120401979|ref|YP_951808.1| hypothetical protein Mvan_0964 [Mycobacterium vanbaalenii PYR-1]
gi|119954797|gb|ABM11802.1| Mammalian cell entry related domain protein [Mycobacterium
vanbaalenii PYR-1]
Length = 416
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/299 (9%), Positives = 85/299 (28%), Gaps = 6/299 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
++ L + +++ + V + +P S GL + +V G+P+GR+ L
Sbjct: 26 AALIMTLVVASAYLFFGALQVNPLASSYRVTVELPESA-GLLPNQNVTMRGVPIGRVERL 84
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ N + + +++ + AG YI+ + + A
Sbjct: 85 DITPAGVNAV---VSVDSSAAVPVASSVRVSGLSPAGEQYIDFVADSGDGPYLADGAVVS 141
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
++ + + + A + + + I+ + +L
Sbjct: 142 QDNTVVPVSLADLLANADGALAQADPAKLELIKRELSMSEAGPQ--KLADIIDGGTFLLT 199
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
S + + + + N ++ + + + + +
Sbjct: 200 TLDSVLPETSSMLRTSRVVLTLAADKNAGIEVASQNLDQVFDGVNRMRQGFRTLTEQTPE 259
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
+ + + + + + Q + + ++ + TS + N
Sbjct: 260 TLAEVDNLFADNSETMVQLLGSLTSTSQLLYLRVPALNALFPAHRTSVLDAIGSIMHDN 318
>gi|291454708|ref|ZP_06594098.1| secreted protein [Streptomyces albus J1074]
gi|291357657|gb|EFE84559.1| secreted protein [Streptomyces albus J1074]
Length = 401
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 2/86 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V + V L S+V+ N + VGR+ + L E + I
Sbjct: 21 LPGGADLGSDPYTVTAEL-DDVLSLVPQSAVKVNDVAVGRVTRIELGGED-WAARVTMKI 78
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE 113
L A + L G Y++
Sbjct: 79 NGKVRLPADAGARLEQSSLLGEKYVQ 104
>gi|302525035|ref|ZP_07277377.1| MCE family protein [Streptomyces sp. AA4]
gi|302433930|gb|EFL05746.1| MCE family protein [Streptomyces sp. AA4]
Length = 351
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/313 (13%), Positives = 98/313 (31%), Gaps = 10/313 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI----YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+++ + ++ + ++ L EV ++ V L +
Sbjct: 1 MKARRLFLALAVSTLAGCAAPGGFRGVYDLPLPGGADLGAHPYEVTVQF-ADVLDLVPQA 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LS 115
+V+ + +PVGR+ + L + + D L + A +R L G ++E +
Sbjct: 60 AVKVDDVPVGRVQSIRLGADGWTAETV-LAVNGDVHLPANAVARLRQSSLLGEKFVELAA 118
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNA--ENTSKKISDSSRHIQKIIENIE 173
+ + A R I +S ++ +R + K ++ E
Sbjct: 119 PVASPSGQLGDKAVIPVSRTNRNPEFEEIFGALSLLLNGGGIGQLQTINRELAKAMDGNE 178
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS-SDSKNTFNTITDLITSLDKMIK 232
+ + ++ + + T L + I + S +D +T K +
Sbjct: 179 EEIRGFLSGVNQLMTNLDAHRRDITAALDGLNHLSASLADRNRQIADALTDLTPGLKTLT 238
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
Q V + Q+S+ ++ + D+R + +L
Sbjct: 239 DQRPQLVTMLQSLDQLSTVATDVTNKSRDDLAADLRALAPILHRLADAGQNLPKALEILP 298
Query: 293 KSKETSAFLENIA 305
T L+ I
Sbjct: 299 SFPFTDPVLDAIK 311
>gi|254776556|ref|ZP_05218072.1| mce-family protein mce1c [Mycobacterium avium subsp. avium ATCC
25291]
Length = 326
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/309 (11%), Positives = 92/309 (29%), Gaps = 6/309 (1%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ + + + + S G++T VR G+ VG++ GL +D
Sbjct: 3 IVVTVLVIGVGQSFTSVPMLFAKPSYYG-QFTDS-GGINTGDKVRIAGMDVGKVEGLKID 60
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
+ H + K I +T + + I+T + G +++ ++
Sbjct: 61 GD---HIVVKFSIGTNT-IGTESRLAIKTDTILGKKILDVEARGSQQLRPGSTLPLGQST 116
Query: 135 AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNI 194
+ + + + + S + + I+ L+ + + S +
Sbjct: 117 TPYQIYDAFFDVTKAAQGWDIETVKQSLHVLSQTIDQTYPHLSPALDGVAKFSDTIGKRD 176
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ ++ ++ + T Q +N +L+NI S
Sbjct: 177 EQVKHLLAQANQVASVLGDRSDQIDRLLVNTKTLLAAFNERGQAINALLDNIAAFSEQVK 236
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
+ N H + + + Q+ D L + + K + + +
Sbjct: 237 GLINDNPNLNHVLEQLRTVSDILVQRKDDLANGLTEVGKFLPSLNEAIASGPFFKVVLHN 296
Query: 315 ISAIREITD 323
++ +
Sbjct: 297 LALYQISQP 305
>gi|300783696|ref|YP_003763987.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793210|gb|ADJ43585.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 402
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/120 (17%), Positives = 43/120 (35%), Gaps = 5/120 (4%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+++ +F + + V + + GL T+ V + G+ VGR+ L L
Sbjct: 16 IALATTAFVGANYAGLGRLFGSGSYTVKLELAE-GGGLFTNGEVTYRGVAVGRVGELRLT 74
Query: 75 QEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
A LI P+ + A + + G Y++L + + + R +
Sbjct: 75 VTGM---EADLLIDDAAPPIPADSRAVVANRSAVGEQYVDLQPRTADAPYLDGSSVIRRE 131
>gi|77166180|ref|YP_344705.1| paraquat-inducible protein B [Nitrosococcus oceani ATCC 19707]
gi|76884494|gb|ABA59175.1| Paraquat-inducible protein B [Nitrosococcus oceani ATCC 19707]
Length = 550
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 83/277 (29%), Gaps = 20/277 (7%)
Query: 39 AEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT 98
+ +I SV GL ++V F G+ VG ++ + + +
Sbjct: 288 YKYVILFDDSVRGLYPGAAVEFRGVRVGTVLNVPFFGDDFG-------MEYSQTFRIPVL 340
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
Q LAG T + ++ + + P G+ I A + +
Sbjct: 341 IAFEPQRLAGTT-WAQFDQKAWQQHLNR------------LFPRGLRATIKAANLLTGAM 387
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ + E + + S+ LA+ I +++ + +
Sbjct: 388 FVDLAFTDQKGAHHEPAFQGQYPLLPSRSSGLASIEEKITRLLDKLNELELAPVLTKLQH 447
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
T+ ++K +D E + F + D++ T++ ++ + ++
Sbjct: 448 TLESTSEVMNKSQNTMDRLNSLLGSEAMGKLPTEFNATLDELRKTLNSYQQGAPVYDKLN 507
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ +D L ET + N
Sbjct: 508 RSLDRLNQVLDDLAPFVETLHNAPSALFFGDNAPEDP 544
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/394 (7%), Positives = 94/394 (23%), Gaps = 24/394 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ V + G VG+I + H D + + R+ GI
Sbjct: 172 LTIGDPVVYQGQEVGQIDTAEFNASALEMHYGVFIRAPFDALITENVQFWPRS----GII 227
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ S + + + I A +++ + +
Sbjct: 228 FEITSEGLQVQTGTLETMLAGGVTFGIPPDLKDGKQAEQGAIFRLYPSRQAAQQDRYDHQ 287
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
L + + +++ + I LI +
Sbjct: 288 YKYVILFDDSVRGLYPGAAVEFRGVRVGTVLNVPFFGDDFGMEYSQTFRIPVLIAFEPQR 347
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + +Q + N + ++ + +
Sbjct: 348 LAGTTWAQFDQKAWQQHL--NRLFPRGLRATIKAANLLTGAMFVDLAFTDQKGAHHEPAF 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + +A + ++ + +++ + ++ K
Sbjct: 406 QGQYPLLPSRSSGLASIEEKI-----TRLLDKLNELELAPVLTKLQHTLESTSEVMNKSQ 460
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
M ++N++ + L + + R T + + +
Sbjct: 461 NTMDRLNSLLGSEAMGKLPTEFNATLDELRKTLNSYQQ------------GAPVYDKLNR 508
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ +L + ++ + P + +G
Sbjct: 509 SLDRLNQVLDDLAPFVETLHNAPSALFFGDNAPE 542
Score = 41.1 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 45/461 (9%), Positives = 112/461 (24%), Gaps = 42/461 (9%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + + E+I+++ + +G+ + V+ + + VG + + L
Sbjct: 23 LVPLAAALIGAWLV--YQNIASQGPEIILQL-DNAEGVEAGKTVVKLHNVDVGLVEKVRL 79
Query: 74 DQEYPNHS-LAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIATE 130
++Y + D L T + G GI+ + + A +
Sbjct: 80 SKDYTGAIAEVRMKADMDPLLVEDTQFWVAKPRVGREGISGLSTILSGVYIQMRPGNAQD 139
Query: 131 RNQRAMITATPSGINYFISNA-------ENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+R + P I ++ S I D + + + I+ A
Sbjct: 140 PARRFQVLERPPTIRIHTEGLSLELVSTDDNSLTIGDPVVYQGQEVGQIDTAEFNASALE 199
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ + + T + + +
Sbjct: 200 MHYGVFIRAPFDALITENVQFWPRSGIIFEITSEGLQVQTGTLETMLAGGVTFGIPPDLK 259
Query: 244 ENIQVSSNNFVKSSDQVINTVHD-VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ Q + D + + L + + + L
Sbjct: 260 DGKQAEQGAIFRLYPSRQAAQQDRYDHQYKYVILFDDSVRGLYPGAAVEFRGVRVGTVLN 319
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL--NDSSQK-----FAELMSK 355
R + T + +
Sbjct: 320 VPFFGDDFGMEYSQTFRIPVLIAFEPQRLAGTTWAQFDQKAWQQHLNRLFPRGLRATIKA 379
Query: 356 INNISALKENNSLFKDAQRA------------MHTFRDTSEKINRYIPSIGNNLQNFSQS 403
N ++ + F D + A + + I I + + L
Sbjct: 380 ANLLTGAMFVDLAFTDQKGAHHEPAFQGQYPLLPSRSSGLASIEEKITRLLDKLNEL--- 436
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI--VWGREK 442
++ ++ KLQ T+ + +N + + + G E
Sbjct: 437 ---ELAPVLTKLQHTLESTSEVMNKSQNTMDRLNSLLGSEA 474
>gi|213161911|ref|ZP_03347621.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
Length = 495
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 92/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 116 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 170
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 171 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 222
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 223 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDY 282
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 283 RIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 342
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 343 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 402
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 403 LQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 450
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 451 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 491
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/276 (9%), Positives = 75/276 (27%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + + ++ SV GL + + F GI +G + +
Sbjct: 225 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVF-----N 279
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + I + L + + + + +
Sbjct: 280 DDYRIP--VLVRIEPERLKAQLGENADVGAHLTELLKRG----------------LRASL 321
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + K I T+S+ LA + + + P
Sbjct: 322 KTGNLVTGALYVDLDFYPKEPPITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLP 381
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + NT+++ ++ ++ +D +++Q + + ++ ++ +
Sbjct: 382 LNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQ 441
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L +T N
Sbjct: 442 PGSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNA 477
>gi|116625294|ref|YP_827450.1| hypothetical protein Acid_6239 [Candidatus Solibacter usitatus
Ellin6076]
gi|116228456|gb|ABJ87165.1| Mammalian cell entry related domain protein [Candidatus Solibacter
usitatus Ellin6076]
Length = 338
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/331 (10%), Positives = 92/331 (27%), Gaps = 12/331 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
K VG+F L + + R+ + A + GL + VR NGI
Sbjct: 5 KRRLLVVGIF----LAVIGGAAFVFLRTTGFAPGYAGLRT-FTDDASGLMDGTQVRLNGI 59
Query: 64 PVG--RIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRK 119
P+G L ++ ++ + + +++ L G YI + +
Sbjct: 60 PIGYLETQKLTNSRDPMRKVELDLKVKTAYLARIPSDSVVGLQSDNLLGDLYIAIHRGQS 119
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ Q I + ++ + ++ +++ + K
Sbjct: 120 PQPIQANAELRTTQAQDIGKLMARMSQELDRLQSIAERADKLLSGASAGHGSAGKIANDK 179
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + I + H + D + +
Sbjct: 180 NLQAAAGISAQIDAILAEAQHGHGSIAKLLYEDPLSVQLQSPMKRFDDIMAAANNRTTQA 239
Query: 240 NQILENIQVSSNNFVKSSDQV---INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + + +F ++ + V Q F + K D ++S +S +
Sbjct: 240 KGLTTELNLLTRDFATLQAELSSGKGSFGKVNALQQRFDALAVKWDGMMSRITSGQGTLG 299
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ ++ + + + + K
Sbjct: 300 QFMVNPQLNEALAGATRELQELAKGLKTNPK 330
>gi|319410923|emb|CBY91318.1| conserved hypothetical protein [Neisseria meningitidis WUE 2594]
Length = 558
Score = 62.3 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/388 (8%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 182 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 241
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 242 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 301
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 302 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 358
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 359 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 410
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + A + + T+ + + L + +
Sbjct: 411 -PHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELNGSLAELKSTLKSAN 469
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 470 AALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 517
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 518 TLQSLDKTLKDVQPVINTLKEKPNALIF 545
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 293 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 352
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 353 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 395
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 396 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLADLLDKFDKLPLDKTVAELN 455
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 456 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 515
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 516 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 551
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 45/461 (9%), Positives = 122/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 22 RKNNTFLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 77
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 78 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 136
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 137 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 196
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 197 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 256
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 257 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 316
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 317 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 376
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 377 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQVKLA 436
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 437 DLLDKFDKLPLDKTVAELNGSLAELKSTLKSANAALSSIDK 477
>gi|242055765|ref|XP_002457028.1| hypothetical protein SORBIDRAFT_03g047410 [Sorghum bicolor]
gi|241929003|gb|EES02148.1| hypothetical protein SORBIDRAFT_03g047410 [Sorghum bicolor]
Length = 380
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 80/272 (29%), Gaps = 8/272 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS ++ WL + G+ + VR G+ VG +V
Sbjct: 98 VGLFMVSGAALLALALAWLRGFQLRSRFRKYNTVFEFTQACGICVGTPVRIRGVTVGSVV 157
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ A + D + ++ + GL T I+++ + +
Sbjct: 158 RVD---SSLRSIDATVEVEDDKIIIPRNSVVEVNQSGLLMETLIDITPKDP----LPAPS 210
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + E ++ + E ++T
Sbjct: 211 VGPLDPDCTKEGLILCDKERMKGQQGVSLDALVGIFTRLGRDMEEIGVSKSYKLAEKVAT 270
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ + ++ + + + D+ T + A + +
Sbjct: 271 IMEEAQPLLTRIEALAEEMQPLLSEVRESDLLKDVETIAKGLADASGDLRKLKSSMLTPE 330
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+++ +S +I T+ ++ +
Sbjct: 331 NTDLIKQSIFTLIFTLKNIESISSDISGFTGD 362
>gi|239931484|ref|ZP_04688437.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 443
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V + V L S+V+ N + VGR+ + L ++ + I
Sbjct: 62 LPGGADLGDHPYTVTAEL-QDVLSLVPQSAVKVNDVAVGRVTRIELGRDD-WSARVTMRI 119
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE 113
D L TA + L G Y++
Sbjct: 120 NGDVRLPADATARLEQSSLLGEKYVQ 145
>gi|300782539|ref|YP_003762830.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|41581803|gb|AAS07747.1| putative secreted protein [Amycolatopsis mediterranei S699]
gi|299792053|gb|ADJ42428.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 390
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/303 (13%), Positives = 89/303 (29%), Gaps = 11/303 (3%)
Query: 10 VGLFVVSILFFSFFSIYW------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
VG+ + L V + V L+ + V+ + +
Sbjct: 7 VGVLATVSALALSGCAFKGIYDLPLPGGADLGDHPYTVNVEF-RDVLDLTPQAGVKVDEV 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEK 121
PVGR+ + L ++ H+L + D L + A ++ L G Y+E +
Sbjct: 66 PVGRVENVGLTKDG-WHALVTLRVNGDVKLPANAIANVKQSSLLGEKYVELASPGADQAH 124
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ AT R + + + + +++ A
Sbjct: 125 GKLADNATIPLARTNR-SVEVEELLGALSLLLNGGGVDQLNTITKELNNATSGREPDIKA 183
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
++ + ++ N + S + N + Q+ Q
Sbjct: 184 LLDNANQLVTNLDRQSKNITRAIDGLNRLSSTLNDQKDKLVGAVDNLGPGLGVLEQQRGQ 243
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
++ +Q N ++D V + D+ + QK+ +D ++ T F
Sbjct: 244 LVTMLQALDNLSGVATDTVNKSQKDLVADLKALTPTLQKLGEAGNDLPKALEILLTFPFS 303
Query: 302 ENI 304
+
Sbjct: 304 DQA 306
>gi|325144935|gb|EGC67219.1| paraquat-inducible protein B [Neisseria meningitidis M01-240013]
Length = 553
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 99/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTV---GSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSSSPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATRGGGLDDLQAKVVDLLDKFDKLPLDKTVAELNGSLAELKSALKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ ++ + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLAGNPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 82/276 (29%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 391 MIELNDQPSSSPKLRPHTVYAGDTVIATRGGGLDDLQAKVVDLLDKFDKLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+ + ++S+DK+ Q + L ++ DV
Sbjct: 451 GSLAELKSALKSANAALSSIDKLAGNPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/467 (9%), Positives = 122/467 (26%), Gaps = 41/467 (8%)
Query: 4 KNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
+ T + + ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTLLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSSSPKLRPHTVYAGDTVIATRGGGLDDLQAKVV 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER---NPQ 434
+ + + ++ + +L+ + + L++ ++ NPQ
Sbjct: 432 DLLDKFDKLPLDKTVAELNGSLAELKSALKSANAALSSIDKLAGNPQ 478
>gi|296179484|gb|ADG96489.1| MceC [Gordonia cholesterolivorans]
Length = 330
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/289 (11%), Positives = 86/289 (29%), Gaps = 8/289 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ G+ + + + P ++ GL+ D V G+
Sbjct: 8 SRAVRAGI--IGTAAILVVLALAFNYRSLPFWPGTTTVVAEFADASGLNVDDEVHVAGVA 65
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRKEK-- 121
G + + L + H + L T A I+ + G Y+EL+T +
Sbjct: 66 AGSVTSISLADD---HVDVGLRLTQGWRDLGSQTRAAIKVETALGRRYVELTTGGSGELG 122
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
I + T + ++ + + + S+ ++ + +++ L
Sbjct: 123 DRIPRSRTTSGFDLTDSLNQLTEQVGDTDKKQVTDAVQSLSQVLKGLPDDLGGSLENVAD 182
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T+S A + + + V + D + + A+ + +
Sbjct: 183 AARTVSRRDAGIRTLLQHTDSLSGVLAERKGNLTRLIDDGDALFAALNDRAAVIRRVLVS 242
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ V++ + ++R+ T T +D ++
Sbjct: 243 LRGVADEIERVTVENRTSTPPMLEELRKVTDTLNANYTNLDKSIAGMRP 291
>gi|296169581|ref|ZP_06851201.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895847|gb|EFG75542.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 360
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/270 (12%), Positives = 80/270 (29%), Gaps = 7/270 (2%)
Query: 39 AEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT 98
GL + V +G+ VG + + L + +L ++ L +T
Sbjct: 40 VRYDAVFSE-AGGLVAGNDVIVSGVKVGSVSKVAL---HHGDALVTFNVKGTVQLGSYST 95
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
A IRT L G + L + + + + + + + + A + +
Sbjct: 96 AHIRTGSLLGQRVLALESTGSGTMHPRDVIPISRTSSPYSLSEAISDLATNVAGTDTATL 155
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ S + ++ I L + +S L + +++ ++
Sbjct: 156 NQSLDTLSATLDQIAPQLGPAFDGVTRLSQALNGRNKALGELLKGAGDITGILSQRSEQL 215
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
L + + Q++ Q+L N + V + + T Q V
Sbjct: 216 NTLILNANDLLGVLVARRQEIAQLLANTSAVATQL---RGVVHDNEQKLAPTLQKLNAVT 272
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADST 308
++ + + + + S
Sbjct: 273 AMLEKNRDNLAKALPGLAKYQLTQAETVSE 302
>gi|256376288|ref|YP_003099948.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
gi|255920591|gb|ACU36102.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
Length = 359
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 49/136 (36%), Gaps = 9/136 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ + V+ + + + +L A V++R + L S V+
Sbjct: 1 MRSRQRLAGLLFAVLLLGICALSTAVYLG----VFRGEAPVLLRTDRVGNQLQVGSEVKL 56
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLR 118
G+P+GR+ + + + + I P + +TTA + + L G Y+ L
Sbjct: 57 LGVPIGRVRAVRATGDG---AEIELGIDPGQVGLVPGNTTARLLPKTLFGERYVSLEAPA 113
Query: 119 KEKKTIFQIATERNQR 134
+ + R
Sbjct: 114 RPSGALAAGDVIDQDR 129
>gi|254429867|ref|ZP_05043574.1| mce related protein [Alcanivorax sp. DG881]
gi|196196036|gb|EDX90995.1| mce related protein [Alcanivorax sp. DG881]
Length = 539
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/399 (8%), Positives = 109/399 (27%), Gaps = 31/399 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYP-NHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
++ V F + VGR+V D + D + S+ + +
Sbjct: 168 INNGDPVSFRSLKVGRVVDTTFDPDAELFRHRLFIEKPYDVLVSDSSRFWKVSGIGFQLD 227
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + + +T + Q ++
Sbjct: 228 ARGFQAQLSSLEALLGGGISFSVPDPNMSTGA-----------------PVEDDHQFVLH 270
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ ++ + +L + + +
Sbjct: 271 DNQESARRALYTQTLDYVLLVERSVRGLQAGAPVEYRGIRIGTVEQVPWAFGAEGPNAMT 330
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I + + S+ ++ V + + + + +F
Sbjct: 331 DSPIPVLIRLEPQRVTHQSAIALPSWESEIRQMVDNGLRASLKAGNLLTGSLFVDLEFHK 390
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + S ++ S +S + + K ++ + ++++ +NLN + + +
Sbjct: 391 NAPATDASLTYRSVPVLPSVDSGGLSKLEDQLHALLKTLNGLP-MQDMANNLNSNLKHLS 449
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ +I N+ N+L + ++ +T + G ++Q
Sbjct: 450 GVTGRIENLLDDPALNALPQQISDNLNALENTLQGWQA------------GGDGYRELQG 497
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
++KL ++ + L+ P +++ R + +
Sbjct: 498 TLQKLNRLLDDAEPLLDTLNEQPNALIFQRHPATDTQPR 536
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/282 (9%), Positives = 85/282 (30%), Gaps = 32/282 (11%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--FLDQEYPNH-----SLAK 84
+ ++ + SV GL + V + GI +G + + E PN
Sbjct: 278 RALYTQTLDYVLLVERSVRGLQAGAPVEYRGIRIGTVEQVPWAFGAEGPNAMTDSPIPVL 337
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ P + S A ++ + + RA + A
Sbjct: 338 IRLEPQRVTHQSAIA------------------LPSWESEIRQMVDNGLRASLKAGNLLT 379
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E + + + + + + ++ +E + + + K ++
Sbjct: 380 GSLFVDLEFHKNAPATDASLTYRSVPVLPSVDSGGLSKLE-------DQLHALLKTLNGL 432
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ +++ + ++ + ++ ++ L + Q + + + N ++ +
Sbjct: 433 PMQDMANNLNSNLKHLSGVTGRIENLLDDPALNALPQQISDNLNALENTLQGWQAGGDGY 492
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+++ T Q + + LL + + +
Sbjct: 493 RELQGTLQKLNRLLDDAEPLLDTLNEQPNALIFQRHPATDTQ 534
>gi|183984022|ref|YP_001852313.1| MCE-family protein Mce3A_1 [Mycobacterium marinum M]
gi|183177348|gb|ACC42458.1| MCE-family protein Mce3A_1 [Mycobacterium marinum M]
Length = 486
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
IL F + W++ + + V + + GL T++ V+ G+ VGR+ +
Sbjct: 15 LILVLLFVAAMWVTYALFMGSLRSVVPVTLTSERSGLVMETNAKVKLRGVQVGRVASIVG 74
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKE 120
+ I D + + A IR + G +++L +
Sbjct: 75 GGKGATPVALTLEIDSDQIRYIPANVQAEIRATTVFGAKFVDLVYPQDP 123
>gi|56459516|ref|YP_154797.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Idiomarina loihiensis
L2TR]
gi|56178526|gb|AAV81248.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Idiomarina loihiensis
L2TR]
Length = 155
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 4/120 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYW-LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
MES+ VG+FVV + FF S + G + + ++ L S V+
Sbjct: 1 MESRKTQLWVGVFVVVGILALFFIALRAASGTMTTSGDSYTLYAKF-DNIGSLKVRSPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + L +Y I D ++T ++ T GL G Y+ L
Sbjct: 60 VGGVVVGRVTDISLSGDYYEP-RVTMSISKDYDKFSEASTLSVLTSGLLGEQYLGLEPGF 118
>gi|118619127|ref|YP_907459.1| MCE-family protein Mce3A_1 [Mycobacterium ulcerans Agy99]
gi|118571237|gb|ABL05988.1| MCE-family protein Mce3A_1 [Mycobacterium ulcerans Agy99]
Length = 486
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 4/109 (3%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
IL F + W++ + + V + + GL T++ V+ G+ VGR+ +
Sbjct: 15 LILVLLFVAAMWVTYALFMGSLRSVVPVTLTSERSGLVMETNAKVKLRGVQVGRVASIVG 74
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKE 120
+ I D + + A IR + G +++L
Sbjct: 75 GGKGATPVALTLEIDSDQIRYIPANVQAEIRATTVFGAKFVDLIYPEDP 123
>gi|145224742|ref|YP_001135420.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315445072|ref|YP_004077951.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|145217228|gb|ABP46632.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315263375|gb|ADU00117.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 424
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/332 (9%), Positives = 89/332 (26%), Gaps = 20/332 (6%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ + + L + + +R P + + + + VR G
Sbjct: 2 TRPTLIRLTAVALGTLLVASAGVIAAARL----FPPTTLTAIF-ANANAIYPGDDVRIAG 56
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG I + D + + + A + Q L ++ L+
Sbjct: 57 VRVGTITAIEADGTQT---VFTLQVDHGVRIAADVKAVVVAQNLVSARFVALTPRGGSGP 113
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTS------------KKISDSSRHIQKIIE 170
A +R + + I + + ++ + +
Sbjct: 114 VAESGAVIPRERTAVPVEWDEVKERIDRLAADLGPTAELTTGSVGRFVDSAADAMAGNGQ 173
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ +T I+ + + + V S++ F ++S+
Sbjct: 174 KLRTAITQLAGISRVIAEGSGDITEMLSHLQTFVAVLRDSNEQIVRFEERLATLSSVLDG 233
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + E + + D+ V + TQ + ++ +L S
Sbjct: 234 SRGDLDAALIHLAEAVGEVQRFVAGTRDRTGEQVARLAGVTQNLVDHRADLEQVLHVAPS 293
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREIT 322
M + S + ++++
Sbjct: 294 AMANAYNMMDPRTGGASGVFVLNNMADPTAFF 325
>gi|291439860|ref|ZP_06579250.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291342755|gb|EFE69711.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 414
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V + V L S+V+ N + VGR+ + L ++ + I
Sbjct: 33 LPGGADLGDHPYTVTAEL-QDVLSLVPQSAVKVNDVAVGRVTRIELGRDD-WSARVTMRI 90
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE 113
D L TA + L G Y++
Sbjct: 91 NGDVRLPADATARLEQSSLLGEKYVQ 116
>gi|118465363|ref|YP_880212.1| virulence factor Mce [Mycobacterium avium 104]
gi|118166650|gb|ABK67547.1| virulence factor mce family protein [Mycobacterium avium 104]
Length = 475
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/273 (12%), Positives = 76/273 (27%), Gaps = 10/273 (3%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
L + ++ N + G I + + + VR +G+ VG I +
Sbjct: 20 GLILAGTAVLV---RNTFFGQKT--ITAYFTTATAIYPNDEVRVSGVKVGNIKSIEPQG- 73
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA--TERNQR 134
+ + D P+ A I L Y++LS ++ + +
Sbjct: 74 --TQAKMTLKVDHDVPIPADAKAVIVASNLVSARYVQLSPAYRDSGPVMPDGAVIPVERT 131
Query: 135 AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNI 194
A+ + A + K S + + I++ L + L+
Sbjct: 132 AVPVEWDEVKTQLMRLATDLGPKSGVSGTSVGRFIDSAANALDGNGDKLRQTLAQLSGVG 191
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ + + +++ A VN ++ + +
Sbjct: 192 RILANGSGNIVDIIKNLQTFVGALRDSNVQIVQFNDRLATLTSVVNDSKSDLDAALTDLS 251
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ +V + R T + +L D
Sbjct: 252 TAVGEVQRFIAGTRNQTSEQIARLADVTQILVD 284
>gi|311744208|ref|ZP_07718012.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311312381|gb|EFQ82294.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 409
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 13/110 (11%), Positives = 27/110 (24%), Gaps = 4/110 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G + + + VR G+ +G + L D + + L
Sbjct: 32 GGDTRTLTASFDR-ATAVYPGTEVRVMGVRIGEVTALVPDGNS---VRVEMEYDAEYQLP 87
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
A + T L Y+++ + R +
Sbjct: 88 AGARAAVVTPTLVADRYVQVFPAYAGGPEMPDGGDIPLDRTQTPIELDRM 137
>gi|324999474|ref|ZP_08120586.1| putative Mce family protein [Pseudonocardia sp. P1]
Length = 389
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/375 (10%), Positives = 111/375 (29%), Gaps = 23/375 (6%)
Query: 4 KNYYTSVGLFVVSILFFSFFSI-------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
+ V L ++ + + L ++ EV I + V L ++
Sbjct: 3 RTTNRLVRLIALAGVGAVLTGCSYSGLNDFRLPGTSGNSSDAYEVRIHM-RDVGDLVPNN 61
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY---IE 113
VR VG I + LD ++ + P+ L + A I L G Y
Sbjct: 62 PVRVGDTDVGSIRSIELD---DWTAVVTVGLEPEVKLPANAMAKIGQVSLLGAKYVELSP 118
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS------NAENTSKKISDSSRHIQK 167
+ + + R I S + ++ + ++ +
Sbjct: 119 PAEGEPWTGELGPGSEIGMTRTGAYPETEEILAATSALLNGGSLQHLRTISYEVNKALDG 178
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ LT + + + ID + + + +
Sbjct: 179 RTGDVRDLLTELNRFAAGLDDQKQDIVRAIDGLDRLSGRLAEQRPVIDNALDTIPPALGV 238
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + + + E + + +SSD + V +++ + + G + L
Sbjct: 239 LVDQRKQLTESLVALGEFGDATDDVVQRSSDDIATNVANLQPALKGLADAGDSLTGSLGM 298
Query: 288 FSSKMKSKETSAFLE--NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + + + + + ++S + + ++ +E + S
Sbjct: 299 LGTLLFPLKNLDEVFQGDYINFYLTLDVTLSTLDRSFLTGTPLQGRLSEVETLMSQGGGP 358
Query: 346 SQK-FAELMSKINNI 359
+ + L+ ++N +
Sbjct: 359 ANQAVDPLIPRLNGV 373
>gi|320104115|ref|YP_004179706.1| Mammalian cell entry related domain-containing protein [Isosphaera
pallida ATCC 43644]
gi|319751397|gb|ADV63157.1| Mammalian cell entry related domain protein [Isosphaera pallida
ATCC 43644]
Length = 423
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/389 (8%), Positives = 106/389 (27%), Gaps = 9/389 (2%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-DQEYPNHSLAKALI 87
+ E+ + GL S VR G+ VG++ + L + E + + +
Sbjct: 30 GSGPGFLASRLELDVLF-QDGQGLRQGSPVRIAGLDVGQVTQVDLAEYEGKLMARVRISL 88
Query: 88 RPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
D L TI++ + T + + M +
Sbjct: 89 PADLVDRLKEDVRITIQSNLTGQNCVNVVGTGSSSRPVRPGQVVRGLESTMFDPILKEVG 148
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + I+ + I + ++ L A + + V +++ +
Sbjct: 149 LGPAERADIGHIIAKVRQAIDEAEPTLQAALIDARATLASARHVAETAQPAATEIIARAR 208
Query: 206 -VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ + + ++ ++ + ++ + D V
Sbjct: 209 AMVARLEQQLPRVEAFLANLEAASGEVRTAVADNRPKLDDTLEHVRDLSGILLDTVETAR 268
Query: 265 HDVRETTQTFQEVGQKIDHL--LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + + +++ + ++ ++ ++ + NI + +N R + +
Sbjct: 269 PKFAKFLDGLEPIRARVERVAYNAELTTAQVAEMIALNRANIDRALANARDATQWAEQTA 328
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR--AMHTFR 380
+ I+ + + L + QR R
Sbjct: 329 QKIYSNPFLISPFYKPRDADLRAQAAVDLARALTQGSRELADLLKTLDLLQRQPLNDARR 388
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ + + + + + + ++
Sbjct: 389 RELDNLRQRMIQLEQWMSQTERQLAESLR 417
>gi|326383324|ref|ZP_08205012.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198074|gb|EGD55260.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 408
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 43/120 (35%), Gaps = 4/120 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ ++ L S ++ +R +Q G ++ G+ D+ V + G+ GR+ G+
Sbjct: 7 VVILLGLGASIYAGVRYARMDQALGFGGYRVVVHMTDGGGIFPDAEVTYRGVSAGRVSGM 66
Query: 72 FLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
L + + + S+ A + + G +++L + +
Sbjct: 67 ELVP---GGVDVELTLESGRAQIPASSVAVVANRSAIGEQFLDLRPPSSAGPFLQDGSEI 123
>gi|257054448|ref|YP_003132280.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584320|gb|ACU95453.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 398
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/322 (11%), Positives = 82/322 (25%), Gaps = 7/322 (2%)
Query: 1 MES-KNYYTSVGLFVVSILFFS----FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
M + + G ++ L V + P V L
Sbjct: 1 MRRFRTTLAAAGAVILVAAGGCSDFEGVYDIPLPGGADLGDNPYTVRVHFPD-VLDLVPQ 59
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
+ VR +PVG + + L ++ + I D L + A +R L G Y+EL+
Sbjct: 60 AGVRVKEVPVGTVQDVRLAEDG-WTAEVVLAINGDVELPANAIANLRQSSLLGEKYVELA 118
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + ++ + + S + A + + E
Sbjct: 119 APSESEGFPGEKLSDGDLIPVERTNRSVEVEEVLGALSMLLNGGGVEQLNTITKELNAAL 178
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + ++ T + +T N D I + +
Sbjct: 179 EGNAPDVKALLRNAEELVEALDEQSSDITTALDQLNRLSSTLNAQRDKIAVAVEDLGPGL 238
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q + + + S V + + + + L + +
Sbjct: 239 EVLERQRDQLVAMLGALEGLSDVAVETVNAGQEDLVANLEALLPTLRKLSEAGADLPNAL 298
Query: 296 ETSAFLENIADSTSNMRSSISA 317
E + ++
Sbjct: 299 ELLLTYPFTDAAAEGVKGDYMN 320
>gi|224032939|gb|ACN35545.1| unknown [Zea mays]
gi|238010682|gb|ACR36376.1| unknown [Zea mays]
Length = 373
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/272 (10%), Positives = 79/272 (29%), Gaps = 8/272 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS ++ WL + G+ + VR G+ VG +V
Sbjct: 91 VGLFMVSGAALLALALAWLRGFQLRSRFRKYNTVFEFTQACGICVGTPVRIRGVTVGSVV 150
Query: 70 GLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ A + + ++ + GL T I+++ + +
Sbjct: 151 RVD---SSLRSVDATVEVGDDKIIIPRNSVVEVNQSGLLMETLIDITPKDP----LPAPS 203
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + E ++ + E +++
Sbjct: 204 VGPLDPDCTKEGLILCDKERMKGQQGVSLDALVGIFTRLGRDMEEIGVSKSYKLAEKVAS 263
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ + ++ + + + D+ T + A + +
Sbjct: 264 IMEEAQPLLTRIEDLAEEMQPLLSEVRDSDLLKDVETIAKGLADASVDLRRLKSSMLTPE 323
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+++ +S +I T+ ++ +
Sbjct: 324 NTDLIKQSIFTLIFTLKNIESISSDISGFTGD 355
>gi|126436261|ref|YP_001071952.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236061|gb|ABN99461.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 398
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/136 (11%), Positives = 36/136 (26%), Gaps = 7/136 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSV 58
M+ GL ++ + V + GL + D+ V
Sbjct: 1 MKGSAVRPLTGLALLVAIGLIIALAI--GLFAGTFTRTVPVTVVSDR--AGLVMNPDAEV 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL- 117
+ G+ VGR+ + + + + I + + G ++
Sbjct: 57 KMRGVDVGRVETIERRPDGKAVLHLAMNPSQLHLIPSNVNVDIASTTVFGAKFVRFFPPE 116
Query: 118 RKEKKTIFQIATERNQ 133
+ + + Q
Sbjct: 117 DPSPEKLRKGQVIEGQ 132
>gi|88706600|ref|ZP_01104303.1| conserved hypothetical protein, secreted [Congregibacter
litoralis KT71]
gi|88699096|gb|EAQ96212.1| conserved hypothetical protein, secreted [Congregibacter
litoralis KT71]
Length = 322
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG FVV + ++V++ GS+ GL+ + V
Sbjct: 1 MSERKSSIFVGAFVVGA-LIIAAAGALFFAGGGLGSEKSKVVMVFDGSLRGLTIGAPVAL 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ +G++ + L + H ++ D
Sbjct: 60 RGVTIGQVTDIDLILDAD-HGEVTMIVEADI 89
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/208 (6%), Positives = 47/208 (22%), Gaps = 50/208 (24%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
L + +++ + S+I++ + +
Sbjct: 111 RGLSAQLNTQSLLTGLLYIQLDFQPDKEASFSTIASPHPQIPTIPTELEQLRRSLETID- 169
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
++ + S ++ + + SL + + S + + + L+ F
Sbjct: 170 YAAIAENVDRIASGLDELLNSSDMQSLPGSMRSTLEALEAASTSLTTTLEENSSGLKAFL 229
Query: 402 QSGLN-------------------------------------------------DIQNLV 412
G + +
Sbjct: 230 DEGTRTVATLNAELPDITDAIEGSLQRLDEALVSANASLGGLERAAAPDSPPRRQLSQAM 289
Query: 413 RKLQETVNHFDDCLNNFERNPQDIVWGR 440
+++ + E +P+ ++ GR
Sbjct: 290 QEVTLAARALRSLARSLEEHPESLLRGR 317
>gi|108800637|ref|YP_640834.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119869776|ref|YP_939728.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771056|gb|ABG09778.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119695865|gb|ABL92938.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 398
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/282 (9%), Positives = 77/282 (27%), Gaps = 7/282 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSV 58
M+ GL ++ + V + GL + D+ V
Sbjct: 1 MKGSAVRPLTGLALLVAIGLIIALAI--GLFAGTFTRTVPVTVVSDR--AGLVMNPDAEV 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL- 117
+ G+ VGR+ + + + + I + + G ++
Sbjct: 57 KMRGVEVGRVETIERRPDGKAVLHLAMNPSQLHLIPSNVNVDIASTTVFGAKFVRFFPPE 116
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + Q + + K++++ I +
Sbjct: 117 DPSPEKLRKGQVIEGQHVTVEVNTVFQQLVEVLDKIDPAKLNETLGAISSAFNGRGEKFG 176
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T+ ++ + + ++ ++ + + + T + T+ Q
Sbjct: 177 QTLVDLNAVLAKIEPSLPNLAQDIEASVPTLTAYGDAAPDLISAVQNTTQFSNTIVDQQQ 236
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+++ L + ++ + + DV E E+
Sbjct: 237 NLDEFLVSAIGLADIGNEVIGGNREALGDVLENLVPTAELLN 278
>gi|254805426|ref|YP_003083647.1| Paraquat-inducible protein B [Neisseria meningitidis alpha14]
gi|254668968|emb|CBA07272.1| Paraquat-inducible protein B [Neisseria meningitidis alpha14]
Length = 558
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/388 (7%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG++ D + H D ++ ++ + + T
Sbjct: 182 LNVNSPVLYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 241
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 242 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 301
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 302 FFKQSVRGLTVG---SPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 358
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 359 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 410
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + + T+ + + L + +
Sbjct: 411 -PHTVYAGDTVIATRGGGLDDLQAKVVDLLDKFGKLPLDKTVTELNGSLAELKSTLKSAN 469
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 470 AALSSIDKLVGKPQTQNIPNELNQTLKELRITLQGVSPQ------------SPIYGDVQN 517
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 518 TLQSLDKTLKDVQPVINTLKEKPNALIF 545
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 85/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 293 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 352
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 353 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 395
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + T++
Sbjct: 396 MIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQAKVVDLLDKFGKLPLDKTVTELN 455
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 456 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRITLQGVSPQSPIYGDV 515
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 516 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 551
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 45/461 (9%), Positives = 122/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 22 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 77
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 78 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 136
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 137 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 196
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 197 QVESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 256
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 257 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 316
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 317 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 376
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 377 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQAKVV 436
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 437 DLLDKFGKLPLDKTVTELNGSLAELKSTLKSANAALSSIDK 477
>gi|269124780|ref|YP_003298150.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268309738|gb|ACY96112.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 342
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/290 (11%), Positives = 77/290 (26%), Gaps = 10/290 (3%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ DG + L S V+ GIP G I + + I
Sbjct: 18 GGCSVIDGGGTYRVTVYFSKAPSLYERSQVKVMGIPAGTITDIR---HEGGRVRVELDID 74
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT-IFQIATERNQRAMITATPSGINYF 147
+ PL ATI + G +I+L K+ + +R +
Sbjct: 75 EEVPLPAGVHATIMSANALGERFIQLHPAWKKGEPKARPGTVIPIERTELPVEIDDALDA 134
Query: 148 ISNAENTSKK------ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
++ I+ + ++ +I + L T ++ + ++
Sbjct: 135 FGKLGDSIDPKSLGDSIASGADGLRGKGGDINRALQATATLTSDLAAQDERLVKLARELR 194
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ +A + + + + I+ S + +
Sbjct: 195 SLATTLNEREKRLTELIDSFSATSRQLAEERAELQRFIVGLAQAIRKSDVLITSLRETLP 254
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
TV D+ T + ++ + + + E + +
Sbjct: 255 GTVADMSNIIMTLKANAGTLNQTIEALAEFTDVAVQAWDRERHVATVRVV 304
>gi|262203809|ref|YP_003275017.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262087156|gb|ACY23124.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 382
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 50/137 (36%), Gaps = 13/137 (9%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M VGL + I+ + + W S + ++ G V ++ D+ V+
Sbjct: 1 MRRTAAVVMVGLLLALIIGATAQFLGWFSGT-----QQVTLVAPRAGLV--MNPDAKVKL 53
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIE-LSTL 117
G+ VGR+ + E H++ I + + + TA I++ + G +
Sbjct: 54 RGVEVGRVQKIS---ERDGHAVLTLDIDDASMSKIPGNVTADIKSNTIFGAKAVSLDIPP 110
Query: 118 RKEKKTIFQIATERNQR 134
+ + + A R
Sbjct: 111 QGPQGHLSAGAEITADR 127
>gi|239999391|ref|ZP_04719315.1| PqiB [Neisseria gonorrhoeae 35/02]
gi|240116090|ref|ZP_04730152.1| PqiB [Neisseria gonorrhoeae PID18]
gi|240126119|ref|ZP_04739005.1| PqiB [Neisseria gonorrhoeae SK-92-679]
gi|254494111|ref|ZP_05107282.1| pqiB protein [Neisseria gonorrhoeae 1291]
gi|260440100|ref|ZP_05793916.1| PqiB [Neisseria gonorrhoeae DGI2]
gi|268595211|ref|ZP_06129378.1| PqiB protein [Neisseria gonorrhoeae 35/02]
gi|268601758|ref|ZP_06135925.1| pqiB protein [Neisseria gonorrhoeae PID18]
gi|268684707|ref|ZP_06151569.1| pqiB protein [Neisseria gonorrhoeae SK-92-679]
gi|291043388|ref|ZP_06569111.1| PqiB protein [Neisseria gonorrhoeae DGI2]
gi|226513151|gb|EEH62496.1| pqiB protein [Neisseria gonorrhoeae 1291]
gi|268548600|gb|EEZ44018.1| PqiB protein [Neisseria gonorrhoeae 35/02]
gi|268585889|gb|EEZ50565.1| pqiB protein [Neisseria gonorrhoeae PID18]
gi|268624991|gb|EEZ57391.1| pqiB protein [Neisseria gonorrhoeae SK-92-679]
gi|291012994|gb|EFE04977.1| PqiB protein [Neisseria gonorrhoeae DGI2]
gi|317164640|gb|ADV08181.1| PqiB [Neisseria gonorrhoeae TCDC-NG08107]
Length = 553
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/393 (7%), Positives = 99/393 (25%), Gaps = 25/393 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEIANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + L + + +
Sbjct: 297 FFKQSVRGLTVGSPVEYKGLNVGMVSDVPYFDRNDSLHLFENGWIPVRIRIE-------- 348
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ E + +++ T T ++ + D +
Sbjct: 349 ----PSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGGKMIELNDQPSASPKL 404
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + A + T+ + + L + +
Sbjct: 405 RPHTVYAGDTVIATRGGGLDDLQAKLADLLDKFNNLPLDKTVAELNGSLAELKSALKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGNPQTQNIPNELNQTLKELRITLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIFNNSSK 545
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGMVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGGK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + +++ ++
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQAKLADLLDKFNNLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+ + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSALKSANAALSSIDKLVGNPQTQNIPNELNQTLKELRITLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + + ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNNSSKD 546
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 47/467 (10%), Positives = 121/467 (25%), Gaps = 40/467 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSGEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE---------VGQKIDHLLSDFSS 290
+ + + N + T++D R + Q + L
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEIANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ K + ++ R + + + + A
Sbjct: 312 EYKGLNVGMVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 351 ------------------ELMSKINNISALKENNSLFKDAQRAMHTFR-DTSEKINRYIP 391
+++ + SA + A + R + + +
Sbjct: 372 LNKGLTATISSNNLLTGGKMIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQAKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER---NPQ 434
+ + N + ++ + +L+ + + L++ ++ NPQ
Sbjct: 432 DLLDKFNNLPLDKTVAELNGSLAELKSALKSANAALSSIDKLVGNPQ 478
>gi|226364211|ref|YP_002781993.1| Mce family protein [Rhodococcus opacus B4]
gi|226242700|dbj|BAH53048.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 409
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/340 (12%), Positives = 104/340 (30%), Gaps = 10/340 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + V I++P +V LS +S VR N + VG + G+ + H+L I
Sbjct: 36 LPGTEGQGDDAYTVEIQMP-NVTTLSQNSPVRVNDVTVGSVTGIEVQ---DWHALVTVSI 91
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP-SGINY 146
D L + TA I L G ++EL+ + + A P +
Sbjct: 92 NGDVRLPANATAKIGQTSLLGSQHLELAPPTDAEPEGTLENGDVIPIERAGAYPTTEQTL 151
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ I+ Q++ + + + + ++ + ++ +
Sbjct: 152 SSLSVVLNGGGIAQIRDITQELNAALGGREESIRDLLPQLDQLVTSLDRQRGDIIGAMEG 211
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S + N D + + + + + ++ V ++ D
Sbjct: 212 LDRLSGTVNEQKATLDAALDGIPPALEVLVTQRQNLTTALVEVGKLSDTATRLVESSGED 271
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
++ + V +++ + S + + T F D ++ +
Sbjct: 272 LKANLRNLTPVLRELANSGSALTEVLTLMLTYPFPMKTMD-----KAIQGDYANLMMTID 326
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+++ + L S + + ++ +
Sbjct: 327 MTNERVDSNFLTGTGLGGSLGGVEGAVGSLAGVAGQSGDP 366
>gi|59801671|ref|YP_208383.1| PqiB [Neisseria gonorrhoeae FA 1090]
gi|194099086|ref|YP_002002169.1| PqiB [Neisseria gonorrhoeae NCCP11945]
gi|240014568|ref|ZP_04721481.1| PqiB [Neisseria gonorrhoeae DGI18]
gi|240017013|ref|ZP_04723553.1| PqiB [Neisseria gonorrhoeae FA6140]
gi|240081352|ref|ZP_04725895.1| PqiB [Neisseria gonorrhoeae FA19]
gi|240113560|ref|ZP_04728050.1| PqiB [Neisseria gonorrhoeae MS11]
gi|240118374|ref|ZP_04732436.1| PqiB [Neisseria gonorrhoeae PID1]
gi|240121090|ref|ZP_04734052.1| PqiB [Neisseria gonorrhoeae PID24-1]
gi|240123919|ref|ZP_04736875.1| PqiB [Neisseria gonorrhoeae PID332]
gi|240128596|ref|ZP_04741257.1| PqiB [Neisseria gonorrhoeae SK-93-1035]
gi|268597453|ref|ZP_06131620.1| PqiB protein [Neisseria gonorrhoeae FA19]
gi|268599623|ref|ZP_06133790.1| pqiB protein [Neisseria gonorrhoeae MS11]
gi|268604087|ref|ZP_06138254.1| pqiB protein [Neisseria gonorrhoeae PID1]
gi|268682544|ref|ZP_06149406.1| pqiB protein [Neisseria gonorrhoeae PID332]
gi|268686985|ref|ZP_06153847.1| pqiB protein [Neisseria gonorrhoeae SK-93-1035]
gi|293398692|ref|ZP_06642870.1| paraquat-inducible protein B [Neisseria gonorrhoeae F62]
gi|59718566|gb|AAW89971.1| putative paraquat-inducible protein B [Neisseria gonorrhoeae FA
1090]
gi|193934376|gb|ACF30200.1| PqiB [Neisseria gonorrhoeae NCCP11945]
gi|268551241|gb|EEZ46260.1| PqiB protein [Neisseria gonorrhoeae FA19]
gi|268583754|gb|EEZ48430.1| pqiB protein [Neisseria gonorrhoeae MS11]
gi|268588218|gb|EEZ52894.1| pqiB protein [Neisseria gonorrhoeae PID1]
gi|268622828|gb|EEZ55228.1| pqiB protein [Neisseria gonorrhoeae PID332]
gi|268627269|gb|EEZ59669.1| pqiB protein [Neisseria gonorrhoeae SK-93-1035]
gi|291611163|gb|EFF40260.1| paraquat-inducible protein B [Neisseria gonorrhoeae F62]
Length = 553
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/393 (7%), Positives = 98/393 (24%), Gaps = 25/393 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEIANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + L + + +
Sbjct: 297 FFKQSVRGLTVGSPVEYKGLNVGMVSDVPYFDRNDSLHLFENGWIPVRIRIE-------- 348
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ E + +++ T T ++ + D +
Sbjct: 349 ----PSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGGKMIELNDQPSASPKL 404
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 405 RPHTVYAGDTVIATRGGGLDDLQVKLADLLDKFNNLPLDKTVAELNGSLAELKSALKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGNPQTQNIPNELNQTLKELRITLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIFNNSSK 545
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGMVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGGK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + +++ ++
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLADLLDKFNNLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+ + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSALKSANAALSSIDKLVGNPQTQNIPNELNQTLKELRITLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + + ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNNSSKD 546
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 47/467 (10%), Positives = 121/467 (25%), Gaps = 40/467 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSGEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE---------VGQKIDHLLSDFSS 290
+ + + N + T++D R + Q + L
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEIANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ K + ++ R + + + + A
Sbjct: 312 EYKGLNVGMVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 351 ------------------ELMSKINNISALKENNSLFKDAQRAMHTFR-DTSEKINRYIP 391
+++ + SA + A + R + + +
Sbjct: 372 LNKGLTATISSNNLLTGGKMIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQVKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER---NPQ 434
+ + N + ++ + +L+ + + L++ ++ NPQ
Sbjct: 432 DLLDKFNNLPLDKTVAELNGSLAELKSALKSANAALSSIDKLVGNPQ 478
>gi|229492681|ref|ZP_04386482.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229320340|gb|EEN86160.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 326
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/293 (9%), Positives = 80/293 (27%), Gaps = 8/293 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ + + Q+ GL+ V G+ +G + + ++
Sbjct: 3 LVVTAAVVLASLQYQNL-QFLKSGVGYSAVF-ADASGLAPGDEVNAAGVKIGTVDRIEVE 60
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
+ + L ST+A + T L G + L + + R
Sbjct: 61 ---HGLARVDFTLEGSIGLGESTSAAVTTMSLLGKRAVSLDLDGPGRIAVGGEIPVERTR 117
Query: 135 AMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNI 194
+ + + + + ++S+S + +++ + L + + IS +
Sbjct: 118 SAYSLPDVLGDLTTTVEDIDLDQLSESLDAVGQVMSDSAPNLRPALDGVARISDSVNRRD 177
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
+ ++ + + + + + +++ NI S
Sbjct: 178 DMLRTLLSDANDVAGTLAERGPQVNALLVDGNALLGELDRRQAALGEVITNISALSTQLS 237
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
V + ++ V + + + S + T +
Sbjct: 238 ---GLVHDNEAQLQPVLGKLDTVVGILQNNKDNLSQGIDGLGTYVGTLGDTVA 287
>gi|226305218|ref|YP_002765176.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226184333|dbj|BAH32437.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 425
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/310 (12%), Positives = 91/310 (29%), Gaps = 11/310 (3%)
Query: 8 TSVGLFVVSILFFSFF------SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
VG + ++L + L + I+ V L S+V+ +
Sbjct: 5 LIVGAGLCAVLISATACSSEGIYAVPLPGGPDVGSDPMHLTIQF-DDVLDLVPQSAVKVD 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRK 119
G+PVGR+ + + + + ++ L + A + L G +I+
Sbjct: 64 GVPVGRVDDVSVGPDG-WTADVGIILDSSVDLPANAIAAVEQTNLLGEKFIQLSAPPSGP 122
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + R AT + + ++++ + T
Sbjct: 123 DSAKLADGDLIPLDRT-RHATEIEQVLGALSLLLNGGGVGQLQPIVEELGAAFDGREGKT 181
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +E +T++ D + S N N I + + ++
Sbjct: 182 RSLLEQANTLIGGLNEQRDDITRALDGLDVLSTRVNDQNEKIGKILEELPVATQVLNEQR 241
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q+ + + +D + + D+ Q + Q + DF + T
Sbjct: 242 PQLTQMLAQVDRLGTVGTDVLTQSKDDLIADLQALRPTLQALADSGDDFVGALPFLPTFP 301
Query: 300 FLENIADSTS 309
F + +
Sbjct: 302 FPDGVEKIAQ 311
>gi|118465982|ref|YP_884135.1| virulence factor Mce [Mycobacterium avium 104]
gi|118167269|gb|ABK68166.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 434
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 9/151 (5%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIP 64
Y GL ++ + + IY + P + + S GL S V +NG+
Sbjct: 15 YKLAGLAILVVGALALTLIY--GQFRGNFTPKTSLTML--ASRAGLVMDPGSKVTYNGVE 70
Query: 65 VGRIVGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+GR+ + ++ + + P + + A I+ + G Y+ L+T
Sbjct: 71 IGRVGTISETVRDGKPAAKFTLEVYPRYLKLIPSNVNADIKATTVFGGKYVSLTTPANPS 130
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAE 152
T + R++ T + S AE
Sbjct: 131 PQKITPHTIIDARSVTTEINTLFQTITSIAE 161
>gi|212633566|ref|YP_002310091.1| Mce4/Rv3499c/MTV023.06c protein [Shewanella piezotolerans WP3]
gi|212555050|gb|ACJ27504.1| Mce4/Rv3499c/MTV023.06c protein [Shewanella piezotolerans WP3]
Length = 156
Score = 61.9 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 52/138 (37%), Gaps = 4/138 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSN-QYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ VGLF++S L ++ ++ + + + ++ GL S V+
Sbjct: 1 MLTRKIEVLVGLFLLSGLAAFLILVFNVANVEVKTGENSYTLHAKF-DNIGGLKVRSPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + LD E + +++ +I T GL G ++ LS
Sbjct: 60 VGGVVVGRVSAIELDPERLVPV-VSLSMDKQYKYFPETSSLSILTSGLLGEQFLGLSPGF 118
Query: 119 KEKKTIFQIATERNQRAM 136
+ + +
Sbjct: 119 MDDDIEMLVDGDSIDDTH 136
>gi|114777673|ref|ZP_01452633.1| paraquat-inducible protein B [Mariprofundus ferrooxydans PV-1]
gi|114551889|gb|EAU54423.1| paraquat-inducible protein B [Mariprofundus ferrooxydans PV-1]
Length = 531
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/411 (10%), Positives = 100/411 (24%), Gaps = 40/411 (9%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G I + + L S V + G+ G ++G L ++ N L I+
Sbjct: 161 GEKGTEITLVADRLGSLDVGSPVYYQGLQAGEVLGYELTKDKKN-ILVYLFIKS------ 213
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+ L + + + S + + +
Sbjct: 214 --------------PFDGLVHSNSHFWNVGGLDVSLGANGVNIHVESMKSLLLGGVAFET 259
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + K IA+ +
Sbjct: 260 ADTLEQRDPVAKDQRFTLFHNHQDIASKVYTNGETFIAYFDNSVRGLAVGAPVEFKGITI 319
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ L + I + + + S + +
Sbjct: 320 GSVSELRLEFNQKDTSFRIPVLLEISFKRMRESGISAGTDSKKLLDQLIAKGLRAQLRMG 379
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
+ L + + ++I+ + Q I
Sbjct: 380 SLLT--GKLFVELDMHPGTPVHLRADKSISFLELPTIPGNFDRMRTSIQNTLAKLDRVDI 437
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
+ I++ L S + L++ ++ + + + + R T E +NR + S
Sbjct: 438 DGISNELKQSLRALHHLLTTLDQ-----HAEPVATNVDQTLRKARKTLELLNRQLKSGSP 492
Query: 396 NLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ + ++ E ++ ERNP+ ++ G+ K K
Sbjct: 493 AV------------RMTEEVGEAARSIRALVDMLERNPESVITGKPKPGGK 531
>gi|324998178|ref|ZP_08119290.1| MCE family protein [Pseudonocardia sp. P1]
Length = 440
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 39/107 (36%), Gaps = 9/107 (8%)
Query: 12 LFVVSILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
L + S + L V I P VD L S VR+ +P
Sbjct: 14 LLTAVAIGASGCGVVDGGLRGIPLPGGASLGDDPYRVQIEFPDVVD-LVPQSIVRYGDVP 72
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+G + + ++ ++L + D L ++TA +RT L G +
Sbjct: 73 IGTVESVDVEP-ASWNALVTIDVNRDVELPANSTARVRTTSLLGEKF 118
>gi|282866021|ref|ZP_06275069.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
gi|282559060|gb|EFB64614.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
Length = 384
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/278 (11%), Positives = 81/278 (29%), Gaps = 3/278 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L E+ V LS SSV+ N + VGR+ + L + +
Sbjct: 46 LPGGADLGDHPYEITAEF-ADVLSLSPQSSVKVNDVAVGRVTKISLSP-GSWTAQVTMRV 103
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
+ + A + L G Y++LS +R P F
Sbjct: 104 NGKIEMPANAYAHLEQSSLLGEKYVQLSPPADGTARGSLTDGDRIPLVRTNRNPEVEEVF 163
Query: 148 IS-NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + ++ + + + + + T++ + H + +
Sbjct: 164 GALSMLLNGGGVDQLKTITTELNKALSGQEPQIRSMLSRVDTLVTDLDDHKEDITDALDG 223
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + T + + + ++ Q+L ++ + D V + D
Sbjct: 224 VNRLAATLATRKQAVGTVLTDLSPGLKVLEKQRGQLLTMLRSLDTLSTVAVDTVNRSKAD 283
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + + +D ++ T F + +
Sbjct: 284 MIADLKALAPTLTALADSGNDLPDSLQVLLTYPFTDEV 321
>gi|238894007|ref|YP_002918741.1| paraquat-inducible protein B [Klebsiella pneumoniae NTUH-K2044]
gi|238546323|dbj|BAH62674.1| paraquat-inducible protein B [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 565
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 65/218 (29%), Gaps = 17/218 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHS 81
S + + ++ SV GL + V F GI +G + +
Sbjct: 296 SIQDSVFTEHIDYVMFFKDSVRGLQPGAPVEFRGIRLGTVGKVPFFIPGLKQRLNDDYRI 355
Query: 82 LAKALIRPDTPL-----YPSTTATI---RTQGLAGITYIELSTLRKEKKTI--FQIATER 131
+ + P + P+ A I +GL G + + A R
Sbjct: 356 PVEVRVEPQRLINQLGGDPNIRAHIDDLINRGLRGSLKTGNLVTGALYIDLDFYPKAPPR 415
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ P A+ + + + I + + T+T+A E +
Sbjct: 416 GKIQEFNGYPIIPTISGGLAQIQQRLMDALDKINNLPINPLLEQATSTLAQSEKTMQHVQ 475
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ +++K+ + + +D + T + +
Sbjct: 476 TTLDNLNKITSSQSMQQLPADMQMTLRELNRSMQGFQP 513
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/404 (7%), Positives = 90/404 (22%), Gaps = 29/404 (7%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLA 107
LS V F G VG + D + + D + + +
Sbjct: 187 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRRITYQLFINAPNDRLVTTNVRFWKDSGIAV 246
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+T + T+F + + + + H+
Sbjct: 247 DLTSAGMRVEMGSLSTLFGGGVSFD--------------IPEGLDLGEPVANKTEYHLFD 292
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++I+ + T + + + + +
Sbjct: 293 DQKSIQDSVFTEHIDYVMFFKDSVRGLQPGAPVEFRGIRLGTVGKVPFFIPGLKQRLNDD 352
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
++ + ++ I + + ++ + +D
Sbjct: 353 YRIPVEVRVEPQRLINQLGGDPNIRAHIDDLINRGLRGSLKTGNLVTGALYIDLDFYPKA 412
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + I + + + + Q
Sbjct: 413 PPRGKIQEFNGYPIIPTISGGLAQIQQRLMDALDKINNLPINPLLEQATSTLAQSEKTMQ 472
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ +N I++ + L D Q + + + + N
Sbjct: 473 HVQTTLDNLNKITSSQSMQQLPADMQMTLRELNRSMQGFQP------------GSAAYNK 520
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ +++L + + L +V+ E K +PK
Sbjct: 521 MVADMQRLDQVLRELQPVLKTLNDKSNALVF--EAKDKKDPQPK 562
>gi|319951376|ref|ZP_08025201.1| putative Mce family protein [Dietzia cinnamea P4]
gi|319434973|gb|EFV90268.1| putative Mce family protein [Dietzia cinnamea P4]
Length = 472
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/138 (14%), Positives = 51/138 (36%), Gaps = 5/138 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ + +F V + I +L +V +++P + GL +++V +
Sbjct: 2 TRLVRIQLTVFAVVTIVSLAIMSIVYLQLPRALGWQRTDVALQMPDT-GGLYKNANVSYL 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G +GR+ + L +A+ + + A IR+ G ++E + +
Sbjct: 61 GSTIGRVDSVTLTPAG---VVAELHFDSGADVPENVRAEIRSVSAVGEQFVEFVPDGQPR 117
Query: 122 KTIFQIATERNQRAMITA 139
+ +R ++
Sbjct: 118 GELADGTVLGPERVVMPQ 135
>gi|226304164|ref|YP_002764122.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183279|dbj|BAH31383.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 330
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/286 (13%), Positives = 89/286 (31%), Gaps = 8/286 (2%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
E + GL+ D V G+P G + L + + L +
Sbjct: 38 KTNEYNAVF-ANATGLTQDDPVNVAGVPSGVVTSLAVSGNS---VEVTFRLDDGVTLGEN 93
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
+ A I+ L G ++++ N T G ++ +
Sbjct: 94 SRADIKISTLLGRRSLDITPNGSRSLPGGSTIPIENTSVPFTLDDLGRGAQSTSENLDLQ 153
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
++ + + + + + ++ I+ +S V+ +N + ++ Q T + +
Sbjct: 154 QLRNMLTVVSDNSPDDPELIRRSLEGIDALSGVVNDNDVALRSLLTGAQQTTATLIEQKD 213
Query: 217 FNTI----TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
DL+ + + + V + + + + V + + D+ E T
Sbjct: 214 TLETLLGNADLVMATIADRRDVLNALVQDLNQLSTTLAQFLGDNQALVDSVMGDIHEVTG 273
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
E Q + LL +F+ ++ + N D S
Sbjct: 274 VLSENEQSLTTLLDNFAPSVRYVTNATGNGNWLDLNSPSTLIPDNW 319
>gi|261399930|ref|ZP_05986055.1| paraquat-inducible protein B [Neisseria lactamica ATCC 23970]
gi|269210379|gb|EEZ76834.1| paraquat-inducible protein B [Neisseria lactamica ATCC 23970]
Length = 553
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 99/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
++ + A + + + ++ S+ +
Sbjct: 237 GSGITLNSAPLPALLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTVG---SPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATRGGGLDNLQAKVVDLLDKFGKLPLDKTVTELNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 85/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + N++ L + + T++
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDNLQAKVVDLLDKFGKLPLDKTVTELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 57.3 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/461 (9%), Positives = 119/461 (25%), Gaps = 38/461 (8%)
Query: 4 KNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
+ T + + ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNRTFLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S + A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGITLNSAPLPALL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDNLQAKVV 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ T+ + L++ ++
Sbjct: 432 DLLDKFGKLPLDKTVTELNGSLAELKSTLKSANAALSSIDK 472
>gi|163749277|ref|ZP_02156526.1| mce-related protein [Shewanella benthica KT99]
gi|161330996|gb|EDQ01922.1| mce-related protein [Shewanella benthica KT99]
Length = 156
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 2/137 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VGLF++S L ++ ++ G + +V GL S V+
Sbjct: 1 MLTRKIEVLVGLFLLSGLAAFLILVFNVANVEVKSGANHYTLYAKFSNVGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + +++ +I T GL G ++ L+
Sbjct: 61 GGVVVGRVSAITLDPSELIPV-VELSMDKHFDQFPETSSLSILTSGLLGEQFLGLTPGFM 119
Query: 120 EKKTIFQIATERNQRAM 136
+ I +R
Sbjct: 120 DDDIAMLIDGDRIDDTH 136
>gi|144898203|emb|CAM75067.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Magnetospirillum
gryphiswaldense MSR-1]
Length = 165
Score = 61.5 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
P V R +DG+ S+VR +G+ +G +V LD + ++ + I + L
Sbjct: 39 PGYTVNARF-NHLDGIGVGSTVRLSGVKIGSVVTQSLDPD--FRAVTRLQIAENVTLPAD 95
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
+TA IRT GL G YIE+ ++ + Q +M
Sbjct: 96 STAVIRTDGLLGAKYIEIGPGGDDRALQDGDSIIYTQDSM 135
>gi|325673333|ref|ZP_08153025.1| hypothetical protein HMPREF0724_10807 [Rhodococcus equi ATCC 33707]
gi|325555923|gb|EGD25593.1| hypothetical protein HMPREF0724_10807 [Rhodococcus equi ATCC 33707]
Length = 371
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/304 (7%), Positives = 79/304 (25%), Gaps = 12/304 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V + V+GL S+V G+PVG + + + L
Sbjct: 36 RTTTVRVDFAY-VNGLYAGSNVTVLGVPVGTVEKVEPMG---TFVRVTTSVPASVELPAD 91
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A + + ++E + + R+ G+ ++
Sbjct: 92 VHAYVLNPSVISDRHLEFGPAYQGGPRLQDGDVVPLDRSHAPIDFDGLMGSLATLAEALG 151
Query: 157 K--------ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+S ++ +Q ++ + + A + + + ++ +
Sbjct: 152 PEGGNAGDLLSRAASGLQGRGDDFNRAVRDLGAATGVVGARSEDIGAVVENLNTLMAQLD 211
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
S + + + + + + + D V ++
Sbjct: 212 DRQVSLDALVSDLAALGDEWSTQDLDLSEPLQDLATVFDQIDRFTAEHGDDVGAVAQNLT 271
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T + + M++ + ++ N+ ++++ ++
Sbjct: 272 TLGGTLVANRSGLAEFMDLVPLLMQNLSQTVGPDDRGRIRLNVSTTLTQFAVAQPLCEQY 331
Query: 329 ISTI 332
+
Sbjct: 332 PMPL 335
>gi|229490528|ref|ZP_04384366.1| MCE family protein [Rhodococcus erythropolis SK121]
gi|229322348|gb|EEN88131.1| MCE family protein [Rhodococcus erythropolis SK121]
Length = 425
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/310 (12%), Positives = 91/310 (29%), Gaps = 11/310 (3%)
Query: 8 TSVGLFVVSILFFSFF------SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
VG + ++L + L + I+ V L S+V+ +
Sbjct: 5 LIVGAGLCAVLISATACSSEGIYAVPLPGGPDVGSDPMHLTIQF-DDVLDLVPQSAVKVD 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRK 119
G+PVGR+ + + + + ++ L + A + L G +I+
Sbjct: 64 GVPVGRVDDVSVGPDG-WTADVGIILDSSVDLPANAIAAVEQTNLLGEKFIQLSAPPSGP 122
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + R AT + + ++++ + T
Sbjct: 123 DSAKLADGDLIPLDRT-RHATEIEQVLGALSLLLNGGGVGQLQPIVEELGAAFDGREGKT 181
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +E +T++ D + S N N I + + ++
Sbjct: 182 RSLLEQANTLIGGLNEQRDDITRALDGLDVLSTRVNDQNEKIGKILEELPVATQVLNEQR 241
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q+ + + +D + + D+ Q + Q + DF + T
Sbjct: 242 PQLTQMLAQVDRLGTVGTDVLTQSKDDLIADLQALRPTLQALADSGDDFVGALPFLPTFP 301
Query: 300 FLENIADSTS 309
F + +
Sbjct: 302 FPDGVEKIAQ 311
>gi|229494532|ref|ZP_04388295.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318894|gb|EEN84752.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 369
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/315 (10%), Positives = 87/315 (27%), Gaps = 20/315 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +V +V + + D + S D + T ++V
Sbjct: 11 MTTTVKKLAVLAAIVICAIGAVLFV-------TRDEHRLTLTAEFT-STDAIFTGNTVTI 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P GR+ + + + + T + A + + + IEL ++
Sbjct: 63 LGVPSGRVESVTPEG---SRVRVALSLPSGTRIPADAQAWVLSPSVISDRTIELGPGYED 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ------KIIENIEK 174
+ + A +R T + ++ +D ++ +
Sbjct: 120 GEFLTDGAVIPLERTHSPLTWDQLTASVNELTVALGPGADGGGIGDLIGEGAHALDGNGQ 179
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ +I S+VLA I +++ T D +++ +
Sbjct: 180 AFNDAVRSISQASSVLAGASPDISELVKNL---NTLVQLIADNQTKVDSLSNSVTVTART 236
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ I + + + S + V T ++ + +++
Sbjct: 237 FSAQREDISGALDSLTTLLGQVSALLAEHGEAVTADLGTLAQLAGAVATKQDQLREIIET 296
Query: 295 KETSAFLENIADSTS 309
T +
Sbjct: 297 APTGFENVANLVTEE 311
>gi|254820123|ref|ZP_05225124.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 445
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/274 (11%), Positives = 80/274 (29%), Gaps = 9/274 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ + + GL T ++V+ G VG++ + LD L K + + L
Sbjct: 39 FFSGGGQYAAYLAE-AGGLKTGAAVQVFGARVGQVSRIDLDGP---RVLVKFTVAKNIRL 94
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T A ++T+ + G E++ + + + + + +
Sbjct: 95 GDRTEAAVKTKSVLGTKVFEVTPRGD--GRLSEPIPLNRTTPAYQLPDALGDLADTISGL 152
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ ++S S + + + L + + +S L + ++ T
Sbjct: 153 NTNQLSGSMATLAQTFSDTPPDLKAAVQGVARLSQTLDMRDGQLRNLLANTNKVTGVLAD 212
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ T+ + ++ I N+ S + + +R
Sbjct: 213 RAAQIASLIANTNALLIELKNQSSALDSISYNVSALSKQLSE---FIAENHAQLRPALDK 269
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
V +D+ ++ A +
Sbjct: 270 LNGVLTIVDNRKDRVQKSIRMLNAYVMSLGEAVA 303
>gi|308394824|ref|ZP_07669326.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu012]
gi|308367651|gb|EFP56502.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu012]
Length = 417
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 1 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 56
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 57 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 116
Query: 108 GITY 111
G Y
Sbjct: 117 GGKY 120
>gi|318059763|ref|ZP_07978486.1| secreted protein [Streptomyces sp. SA3_actG]
Length = 438
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/421 (9%), Positives = 114/421 (27%), Gaps = 24/421 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIPVGR 67
G+ + + + + + + D P ++ GSV + + V+ G+ VG+
Sbjct: 8 LAGIAFLVVAALLIWLAVAVYQKDFSDDPR---VVVETGSVGNEMHIGAEVKLRGVVVGQ 64
Query: 68 IVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEK-KTI 124
+ + ++ + ++P + A + L G Y+ L + +
Sbjct: 65 VRAIDASRQG---ARLTLAMKPGALKSIPDDVRAQMLPTTLFGERYVALVADTSKPGTPL 121
Query: 125 FQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTT 178
A R+ + + S +S S+ + + + + LT
Sbjct: 122 GAGAVIPQDRSANAIELQQVLDHTLPLLTAVQPQKLSATLSAVSQALDGRGDKLGETLTE 181
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
A+++ + L + +++ + V ++ + ++
Sbjct: 182 LDAHLKRFNPELPALNEDLKQLVTVSHVYADAAPGIVDALHDFTTTSGTLAEKESDLSAA 241
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK----IDHLLSDFSSKMKS 294
+ + D +I R T Q E + + L ++
Sbjct: 242 YAGTTRAAEDVDGFLRANKDTIIRLSTTSRGTLQLLAEYSAEFPCTLRALTEFAPRMDRA 301
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ + + S + + ++ A +
Sbjct: 302 LGKGTGHPGVHVEVTTVPSRGAYRPGRDTPAYTASGGPHCYSAPYLGEASGTRPAATASA 361
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
+ + + + + S N + + + D ++ +
Sbjct: 362 SADKDLGPVNSPQENDLVNELLSAPAKDT----KRTGSTKNPESAGAGTRVPDAESPAEE 417
Query: 415 L 415
L
Sbjct: 418 L 418
>gi|240170052|ref|ZP_04748711.1| MCE-family protein Mce4C [Mycobacterium kansasii ATCC 12478]
Length = 361
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 11/74 (14%), Positives = 25/74 (33%), Gaps = 4/74 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
G++ ++V +G VG++ + L + + + +
Sbjct: 47 QGKTYDAYFTD-AGGITPGNAVYVSGFKVGKVSEVSLAGDS---AKITFSVDRKVVVGDQ 102
Query: 97 TTATIRTQGLAGIT 110
+ A IRT + G
Sbjct: 103 SLAAIRTDTILGER 116
>gi|291449033|ref|ZP_06588423.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291351980|gb|EFE78884.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 368
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/309 (9%), Positives = 73/309 (23%), Gaps = 10/309 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ G+ S +R G+ VG + + A + +
Sbjct: 3 EDGKTTVTAYFDRATGVYAGSDLRILGVRVGTVDSVEP---RGKEVKAVLRLDRGIDVPK 59
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
A + L YI+L+ + + A R ATP ++ ++ S
Sbjct: 60 DAHAVVVAPSLVADRYIQLAPAYDGGPRLAEGAVLPAARN---ATPVEVDELYASITELS 116
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + + + + K + + +
Sbjct: 117 TALGPNGANANGAFARLLDTGAKNLDGNGKAIGDSIEQFGKATKTLDKSSGDLFDTLKYL 176
Query: 216 TFNTIT----DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
T D + + +N+ + + QV + R +
Sbjct: 177 QGFTTMLKENDGNVRNAEQQLNTVTTFLADDKKNLSAALKELGTALGQVKTFIAKNRGSL 236
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ E I L D + + + L + ++ + +
Sbjct: 237 KKNVEALVPITQTLVDQRASLAEAMDTLPLAAGNVLNAYDPANRTLNGRTNLNELSMGGP 296
Query: 332 INTIENITS 340
+
Sbjct: 297 LVEPGAAAE 305
>gi|238795883|ref|ZP_04639396.1| Paraquat-inducible protein B [Yersinia mollaretii ATCC 43969]
gi|238720346|gb|EEQ12149.1| Paraquat-inducible protein B [Yersinia mollaretii ATCC 43969]
Length = 529
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/267 (13%), Positives = 87/267 (32%), Gaps = 13/267 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + + V F GI VG + + + +
Sbjct: 259 SIQNSLYTEHEDFLLFFSDSVRGLQSGAPVEFRGIRVGTVADVPFFTDGMKQ-----RVD 313
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + I + A ER RA + +
Sbjct: 314 NDFRIP----VLIRIEP---GRFRNDLGPDANFEQILKTAKERGLRASLKSGNLLTGALF 366
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + ++ + ++ +A ++ + I+++ +VT
Sbjct: 367 IDLDFYP-DAKPWKGPLEVAGYPLLPTVSGGLAQMQQKVMQTLDKINNLPLDPMLNEVTK 425
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+S+ T + SL + + ++ + Q L+ N +K + +
Sbjct: 426 TLVESQKTMRETQKTLESLTAITASPAMKDLPQDLQKTLNELNRSMKGFQPGSPAYNKMV 485
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q +V +++ +L + K +
Sbjct: 486 GDMQRLDQVLRELQPVLRTLNEKSNAL 512
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/415 (10%), Positives = 106/415 (25%), Gaps = 44/415 (10%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 146 SEQAGQLNAGDPVLFRGYRVGSVETSTFDAKSR---------------------LMRYQL 184
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK-----ISD 160
G Y L T +A + + + M S F
Sbjct: 185 FIGAPYDSLVTTNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLELGKPI 244
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
++ + + + + ++ + ++ + + +
Sbjct: 245 TTDKPEFKLFDNRSSIQNSLYTEHEDFLLFFSDSVRGLQSGAPVEFRGIRVGTVADVPFF 304
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
TD + I + + + +R + ++ +
Sbjct: 305 TDGMKQRVDNDFRIPVLIRIEPGRFRNDLGPDANFEQILKTAKERGLRASLKSGNLLTGA 364
Query: 281 I-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L +K + + S + + T + + + +T
Sbjct: 365 LFIDLDFYPDAKPWKGPLEVAGYPLLPTVSGGLAQMQQKVMQTLDKINNLPLDPMLNEVT 424
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
L +S + E + +++A+ A +D + + + + + +++
Sbjct: 425 KTLVESQKTMRETQKTLESLTAIT-----------ASPAMKDLPQDLQKTLNELNRSMKG 473
Query: 400 FSQSGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
F Q G +V +Q + L +V+ E + +PK
Sbjct: 474 F-QPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 525
>gi|271498871|ref|YP_003331896.1| mammalian cell entry related domain-containing protein [Dickeya
dadantii Ech586]
gi|270342426|gb|ACZ75191.1| Mammalian cell entry related domain protein [Dickeya dadantii
Ech586]
Length = 199
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 55/146 (37%), Gaps = 2/146 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + VG+F++ L F ++ + ++ GL S V+
Sbjct: 1 MQTKKHEIGVGVFMLIALCAIIFLCLKVADLKSLGQQQTYRLYATFDNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ +GR+V + LD + I + +++ +RT GL G Y+ L+ +
Sbjct: 61 GGVVIGRVVDISLDTKTY-LPRVAMDIDKRYNHIPDTSSLAVRTSGLLGEQYLALNIGFE 119
Query: 120 EKKTIFQIATERNQRAMITATPSGIN 145
++ I + +
Sbjct: 120 DEDMGTSILQDGGTIQDTKPAMVLED 145
>gi|329296513|ref|ZP_08253849.1| paraquat-inducible protein B [Plautia stali symbiont]
Length = 547
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/409 (9%), Positives = 82/409 (20%), Gaps = 41/409 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D + + Q
Sbjct: 168 AGQLNPGDPVLFRGYRVGTVETSTFDTDKR---------------------MMNYQLFIA 206
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + + M S F + +
Sbjct: 207 APYDRLITTNVRFWKDSGIAVDMSASGMRVEMGSLTTLFSGGVSFDVPDGWELGELAKNQ 266
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + +
Sbjct: 267 DDYHLYDDQRSIQDSLYTKHTDFLMFFSDSIRGLQVGAPVEFRGIRLGTVAQVPYMIPGV 326
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
D + I + + + + + G + L
Sbjct: 327 NQALNTDYRVPVLIRIEPDRFISRLGGDFNLKQHLQDGKKRGLSAMLKTGNLLSGALFVD 386
Query: 289 SSKMKSKETSAFLENIADSTS--------NMRSSISAIREITDQRQKIISTINTIENITS 340
+ +A + + IN
Sbjct: 387 LDFYDNAPAYKGPNKVAGLEVIPTVSGGLSQIQQKLMAALDKINALPLNPMINQATGTLK 446
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ Q+ + + +N I+A +L D Q+ + + + +
Sbjct: 447 ESQRTLQQLQKTLDNLNKITANPAMKTLPADMQQTLRELNRSMKGLQP------------ 494
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
N + +++L + + L +V+ + G K
Sbjct: 495 GSPAYNKLVGDMQRLDQVLRELQPVLKTLNSKSNALVFEAKPGQDPQPK 543
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 7/74 (9%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHS 81
S + + ++ S+ GL + V F GI +G + +
Sbjct: 277 SIQDSLYTKHTDFLMFFSDSIRGLQVGAPVEFRGIRLGTVAQVPYMIPGVNQALNTDYRV 336
Query: 82 LAKALIRPDTPLYP 95
I PD +
Sbjct: 337 PVLIRIEPDRFISR 350
>gi|311744209|ref|ZP_07718013.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311312382|gb|EFQ82295.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 328
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 93/267 (34%), Gaps = 11/267 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + G + GL S+V+ GI VGR+ + + P +A+ +
Sbjct: 30 LQKLPGFRGATYYAEL---TDASGLRVGSTVQVAGIHVGRVNDITI---GPEMVIAEFDV 83
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
+ L T A + + L G ++ L++ +
Sbjct: 84 K-GITLGEDTRAAVEVKSLLGDKFLSLTSRGGGTMPEGDTIPLARTDVTFDIVQTLGQLT 142
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + ++ + + + ++ + +++ + +S +A+ + +++++ ++
Sbjct: 143 TQTEQTNRENLTAALDSLAETLDAATPEIRSSLGGLSALSETIASRDAELEELLARSRNV 202
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV----KSSDQVINT 263
D + +L + +N +L N + + +Q+ T
Sbjct: 203 TGLLDERKGDLVQLMENANLVFAELRQRKEAINALLVNADQLAVQLRGVVDDNREQLAPT 262
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + QE +++ LL ++
Sbjct: 263 LAQLDDVLSFLQEREDQVEELLRNYGP 289
>gi|238754337|ref|ZP_04615693.1| Paraquat-inducible protein B [Yersinia ruckeri ATCC 29473]
gi|238707370|gb|EEP99731.1| Paraquat-inducible protein B [Yersinia ruckeri ATCC 29473]
Length = 541
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/284 (14%), Positives = 89/284 (31%), Gaps = 13/284 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + V F GI VG + + E +
Sbjct: 271 SIQNSLFTEHDDFLLFFSDSVRGLQAGAPVEFRGIRVGTVGDVPFFTEGIKQ-----TVD 325
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + I + A ER RA + +
Sbjct: 326 NDYRIP----VLIRIEP---GRFRGDLGPETHFEQILKTAKERGLRASLKSANLLTGALF 378
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + + + +A I+ V + I+++ +V
Sbjct: 379 VDLDFYP-DAKPWKGPQEIAGYPLLPTASGGLAQIQQKLMVTLDKINNLPLTPVLNEVAQ 437
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
++S+ T + SL+++ ++ + + L+N N +K + +
Sbjct: 438 TLAESQKTMRETQKTLASLNEITSTQAMKDLPKDLQNTLNEINRSMKGFQPGSPAYNKMV 497
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
Q +V +++ +L + K + A +
Sbjct: 498 GDMQRLDQVLRELQPVLRTLNEKSNALVFEAASSQDPKPKKATK 541
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 39/406 (9%), Positives = 106/406 (26%), Gaps = 26/406 (6%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + + + T +
Sbjct: 158 SDQAGQLNAGDPVLFRGYRVGSVETGAFDPKSRM-----MRYQLFISAPYDSLVTTNVRF 212
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+ + + + ++T + S + T+ K+ D+
Sbjct: 213 WKDSGVAVDLSAQGMRVEMASLSTLFSGGVSFDVPDSLDLGQPVTQDKTAFKLFDN---- 268
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+I+ L T + + + + D I +
Sbjct: 269 ---RSSIQNSLFTEHDDFLLFFSDSVRGLQAGAPVEFRGIRVGTVGDVPFFTEGIKQTVD 325
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ I ++ + + + + + ++ + +D
Sbjct: 326 NDYRIPVLIRIEPGRFRGDLGPETHFEQILKTAKERGLRASLKSANLLTGALFVDLDFYP 385
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
K + L A + + +N + + +
Sbjct: 386 DAKPWKGPQEIAGYPLLPTASGGLAQIQQKLMVTLDKINNLPLTPVLNEVAQTLAESQKT 445
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ + ++ +N I++ + L KD Q ++ + +
Sbjct: 446 MRETQKTLASLNEITSTQAMKDLPKDLQNTLNEINRSMKGFQP------------GSPAY 493
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + +++L + + L +V+ E S + KPK
Sbjct: 494 NKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAASSQDPKPK 537
>gi|296165204|ref|ZP_06847751.1| virulence factor Mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899393|gb|EFG78852.1| virulence factor Mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 348
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 85/291 (29%), Gaps = 14/291 (4%)
Query: 1 MESKN----YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M+ + T +G V+++ + + + L +
Sbjct: 10 MKRRPLESYNKTWLGFIAVAVVAVIIGVMLLVHAVG---AGYRHYSAEFLQAAS-LRAGN 65
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
+ GIPVG + + L + H A IR + L + A I+ + G Y+ +
Sbjct: 66 PIVVAGIPVGNVTSMKLVGD---HVEAGLKIRDNIALGKDSRAQIKVTTILGSRYLAIEP 122
Query: 117 LRKEKKTIFQIATERNQRAMITA---TPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ + + + +++ ++ ++ + ++ + +
Sbjct: 123 NGPGRLPDNTFDLAHTEVPYDLQAALQDATTTFEQVDSDRFAQSLAVLGKQLEGLPAVVP 182
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ ++ I+ + T T + +A
Sbjct: 183 QAISNIHTLSSIIALRRDQLGQLLRSTEQVTNTLRRQQAGIGTLVNQGQDLLGQFVARRA 242
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + + I + S V + + + D+R+ T + + +
Sbjct: 243 VFHAMMQSLSSLIDIMSQVVVNDRSGLDSLIKDMRDFTDLMSKHDDLLRSM 293
>gi|168233437|ref|ZP_02658495.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194471935|ref|ZP_03077919.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194458299|gb|EDX47138.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332425|gb|EDZ19189.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 546
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 92/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 454 LQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNVKSNALVF--EAKDKKDPEPK 542
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/276 (9%), Positives = 75/276 (27%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASKMRQVF-----N 330
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + I + L + + + + +
Sbjct: 331 DDYRIP--VLVRIEPERLKAQLGENADVGAHLTELLKRG----------------LRASL 372
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + K I T+S+ LA + + + P
Sbjct: 373 KTGNLVTGALYVDLDFYPKEPPITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLP 432
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + NT+++ ++ ++ +D +++Q + + ++ ++ +
Sbjct: 433 LNPMIEQATNTLSESQRTMRRLQTTLDNMNKITSSQSMQQLPADMQTTLRELNRSMQGFQ 492
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L +T N
Sbjct: 493 PGSAAYNKMVADMQRLDQVLRELQPVLKTLNVKSNA 528
>gi|262202877|ref|YP_003274085.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262086224|gb|ACY22192.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 329
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/300 (10%), Positives = 88/300 (29%), Gaps = 15/300 (5%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ +Y +G V+ ++ ++ + G+ VR GI
Sbjct: 13 RFWYGLIGAAVIVVILLGVTAL----ATAHIGKQTLTGDFA---QAGGVRPGDKVRVAGI 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
G + L+ H + D + + +A I+ L G YI+LS +
Sbjct: 66 DKGEVSDTELNGN---HITITMKVDNDVHVTANGSAEIKLSTLLGQRYIDLSLGDSTEG- 121
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ E+ + I N + + + I+ + + T +
Sbjct: 122 LKDGKIEQTRVPYDLQRTIEAGAPILN----NVDSPELANSIRTLNRQLAGAPAVTKPTV 177
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ ++ + + D++ T + + +I + + + +
Sbjct: 178 DALTEMSKVITNRKDQINQLLADTKTVTSIVDDNQAQLAIIVGQGRELAQKIATRDVLVK 237
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + ++ + + Q ++ ++ ++ +A L N
Sbjct: 238 RMLDGIAALSEQAKLVAGENGNQFAPIMANLNTITQGLEKNRANLRKLLEILPVTARLTN 297
>gi|152969537|ref|YP_001334646.1| paraquat-inducible protein B [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|262039993|ref|ZP_06013258.1| paraquat-inducible protein B [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330010375|ref|ZP_08306735.1| hypothetical protein HMPREF9538_04434 [Klebsiella sp. MS 92-3]
gi|150954386|gb|ABR76416.1| paraquat-inducible protein B [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|259042661|gb|EEW43667.1| paraquat-inducible protein B [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534567|gb|EGF61149.1| hypothetical protein HMPREF9538_04434 [Klebsiella sp. MS 92-3]
Length = 545
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/218 (13%), Positives = 65/218 (29%), Gaps = 17/218 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHS 81
S + + ++ SV GL + V F GI +G + +
Sbjct: 276 SIQDSVFTEHIDYVMFFKDSVRGLQPGAPVEFRGIRLGTVGKVPFFIPGLKQRLNDDYRI 335
Query: 82 LAKALIRPDTPL-----YPSTTATI---RTQGLAGITYIELSTLRKEKKTI--FQIATER 131
+ + P + P+ A I +GL G + + A R
Sbjct: 336 PVEVRVEPQRLINQLGGDPNIRAHIDDLINRGLRGSLKTGNLVTGALYIDLDFYPKAPPR 395
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ P A+ + + + I + + T+T+A E +
Sbjct: 396 GKIQEFNGYPIIPTISGGLAQIQQRLMDALDKINNLPINPLLEQATSTLAQSEKTMQHVQ 455
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ +++K+ + + +D + T + +
Sbjct: 456 TTLDNLNKITSSQSMQQLPADMQTTLRELNRSMQGFQP 493
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/404 (7%), Positives = 90/404 (22%), Gaps = 29/404 (7%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLA 107
LS V F G VG + D + + D + + +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRRITYQLFINAPNDRLVTTNVRFWKDSGIAV 226
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+T + T+F + + + + H+
Sbjct: 227 DLTSAGMRVEMGSLSTLFGGGVSFD--------------IPEGLDLGEPVANKTEYHLFD 272
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++I+ + T + + + + +
Sbjct: 273 DQKSIQDSVFTEHIDYVMFFKDSVRGLQPGAPVEFRGIRLGTVGKVPFFIPGLKQRLNDD 332
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
++ + ++ I + + ++ + +D
Sbjct: 333 YRIPVEVRVEPQRLINQLGGDPNIRAHIDDLINRGLRGSLKTGNLVTGALYIDLDFYPKA 392
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + I + + + + Q
Sbjct: 393 PPRGKIQEFNGYPIIPTISGGLAQIQQRLMDALDKINNLPINPLLEQATSTLAQSEKTMQ 452
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ +N I++ + L D Q + + + + N
Sbjct: 453 HVQTTLDNLNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNK 500
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ +++L + + L +V+ E K +PK
Sbjct: 501 MVADMQRLDQVLRELQPVLKTLNDKSNALVF--EAKDKKDPQPK 542
>gi|330994289|ref|ZP_08318217.1| putative ABC transporter substrate-binding protein
[Gluconacetobacter sp. SXCC-1]
gi|329758756|gb|EGG75272.1| putative ABC transporter substrate-binding protein
[Gluconacetobacter sp. SXCC-1]
Length = 316
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/264 (12%), Positives = 89/264 (33%), Gaps = 7/264 (2%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
++ + P + I +P + V GLS + GI G + + ++ ++
Sbjct: 36 GAVIEAGVLRDWLTPAGRLRIVLPENGVSGLSVGDDLEVMGIHAGTVRRVRINPAGGMYA 95
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
+A+ + + +TA IR + + + K + A A P
Sbjct: 96 IAEIDPDIEPYIRRDSTAIIRRRFVVAGASYIDISRGVGDKLDWSYAVLSATNA-----P 150
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ + + ++ + Q ++ ++ +T A +I ++ N+
Sbjct: 151 NPADTITQTFSDIRDRVIPVLDNAQHMMATLDATITDMHAGKGSIGRLMTNDDLIRQAEQ 210
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
T + S + ++ + + + + + + + N +S Q+
Sbjct: 211 MITSLNATVSQLTPIEKQLGTVMERANASMTNVQ-KATGDLSDATPAITRNLKDASQQLP 269
Query: 262 NTVHDVRETTQTFQEVGQKIDHLL 285
+ + T + Q++ ++ L
Sbjct: 270 VLLVQAQTTAASLQKLVDQMRGLW 293
>gi|293396734|ref|ZP_06641010.1| paraquat-inducible protein B [Serratia odorifera DSM 4582]
gi|291420998|gb|EFE94251.1| paraquat-inducible protein B [Serratia odorifera DSM 4582]
Length = 548
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/412 (9%), Positives = 97/412 (23%), Gaps = 28/412 (6%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ I + G L+ V F G VG + + D + + + P T+
Sbjct: 160 LRIVLDSDKSGQLNAGDPVLFRGYRVGSVETSYFDPKLRA---MRYQLFITAPYDQLVTS 216
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+R +G+ + + + + + AE
Sbjct: 217 NVRFWKDSGVAFDMSAQGMRVEMGSLATLFSGGVSFDVPDGWERGAKAQEKAEYQLYDSQ 276
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
S + + + + + + P ++
Sbjct: 277 RSIQDSLYTVHKDYLLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYKPGMEQRLDSDYR 336
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
I LI + + + + + + +
Sbjct: 337 IPVLIRIEPDRFQKQLGNNFDMEKHLKDAEARGLRAALKSANLLTGSLYIDLDFYPQ--- 393
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+A + ++ + IN
Sbjct: 394 --QSAWKGPRELFGYPLLPTTSGGLAQIQQKLMQTLD-----KINAMPLNPMINEATKTL 446
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
S + ++ + M +N+I A K L +D Q+ + + +
Sbjct: 447 SESQRTMRETQQTMKSLNDIIASKAMKELPQDMQKTLQELNRSMKGFQP----------- 495
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + +++L + + L +V+ E + +PK
Sbjct: 496 -GSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAATSDDPQPK 544
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 42/464 (9%), Positives = 122/464 (26%), Gaps = 53/464 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + + +V+ L ++ Y S V+ + +GL + ++
Sbjct: 16 RWSPVWI-IPIVTALIGAWILFYHFSHQG-------PVVTLYTTTAEGLEAGKTRIKSRS 67
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI-----------RTQGLAGI 109
+ VG + + L ++ + L +A + L + + L
Sbjct: 68 VDVGTVESVTLSED-LSKVLIQARLNSGMEKLLRQDSAFWVVKPQIGREGVSGLGTLLSG 126
Query: 110 TYIELSTL-------RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
YIEL + + + + + S + ++ + +
Sbjct: 127 AYIELQPGSKGKEGKEEYQLLDAPPLASPDAKGLRIVLDSDKSGQLNAGDPVLFRGYRVG 186
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHI------DKMMHTTQVTPHSSDSKNT 216
+ + + + ++ +N+ M S +
Sbjct: 187 SVETSYFDPKLRAMRYQLFITAPYDQLVTSNVRFWKDSGVAFDMSAQGMRVEMGSLATLF 246
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
++ + + + Q+ ++ + ++ + D Q
Sbjct: 247 SGGVSFDVPDGWERGAKAQEKAEYQLYDSQRSIQDSLYTVHKDYLLFFSDSVRGLQPGAP 306
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIE 336
V + L + L++ +R ++ + + E
Sbjct: 307 VEFRGIRLGTVAQVPFYKPGMEQRLDSDYRIPVLIRIEPDRFQKQLGNNFDMEKHLKDAE 366
Query: 337 NITSNLNDSSQKFAELMSKIN--------------NISALKENNSLFKDAQRAMHTFRDT 382
S I+ + + + T
Sbjct: 367 ARGLRAALKSANLLTGSLYIDLDFYPQQSAWKGPRELFGYPLLPTTSGGLAQIQQKLMQT 426
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
+KIN + + ++ L++ Q +R+ Q+T+ +D +
Sbjct: 427 LDKINAM--PLNPMINEATK-TLSESQRTMRETQQTMKSLNDII 467
>gi|118467131|ref|YP_880209.1| virulence factor Mce [Mycobacterium avium 104]
gi|254773837|ref|ZP_05215353.1| virulence factor Mce family protein, putative [Mycobacterium avium
subsp. avium ATCC 25291]
gi|118168418|gb|ABK69315.1| virulence factor Mce family protein, putative [Mycobacterium avium
104]
Length = 420
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/275 (8%), Positives = 76/275 (27%), Gaps = 7/275 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVG 66
+GL + I+ F V + GL + D+ V+ G+ VG
Sbjct: 34 LLGLATILIIGLIFAVAV--GLFQGSFTETVPVTVISQR--AGLVMNPDAKVKMRGVQVG 89
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT-YIELSTLRKEKKTIF 125
++ + + + I + + G + + + +
Sbjct: 90 KVASIESLPNGQAAIHLAMDPSQMHFIPSNVLVDIASSTVFGAKSIQLVEPAQPSAQRLR 149
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
T + Q M+ + K+++S + + L +++++++
Sbjct: 150 AGQTLQGQHVMVEINTVFQELVSVLSHIDPPKLNESLGALAQAFSGRGPQLGQSLSDLDS 209
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
L ++ + ++ T + + ++ +L +
Sbjct: 210 FLARLEPSLPAFRHDLSVLPTVSNAYADAAPDLVKTAANATRISKTLVDEQHNLDALLIS 269
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
++ + +V ++ +
Sbjct: 270 AIGLADIGNDVLSTNRQPLTNVLHLLVPTTDLTNE 304
>gi|57116701|ref|YP_177701.1| MCE-family protein MCE1A [Mycobacterium tuberculosis H37Rv]
gi|148659933|ref|YP_001281456.1| MCE-family protein Mce1A [Mycobacterium tuberculosis H37Ra]
gi|148821361|ref|YP_001286115.1| MCE-family protein mce1A [Mycobacterium tuberculosis F11]
gi|167970290|ref|ZP_02552567.1| virulence factor [Mycobacterium tuberculosis H37Ra]
gi|218755903|ref|ZP_03534699.1| MCE-family protein mce1A [Mycobacterium tuberculosis GM 1503]
gi|253797091|ref|YP_003030092.1| MCE-family protein mce1A [Mycobacterium tuberculosis KZN 1435]
gi|254233558|ref|ZP_04926884.1| MCE-family protein mce1A [Mycobacterium tuberculosis C]
gi|254366621|ref|ZP_04982665.1| MCE-family protein mce1A [Mycobacterium tuberculosis str. Haarlem]
gi|254549108|ref|ZP_05139555.1| MCE-family protein mce1A [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289552421|ref|ZP_06441631.1| MCE-family protein mce1A [Mycobacterium tuberculosis KZN 605]
gi|289764285|ref|ZP_06523663.1| MCE-family protein mce1A [Mycobacterium tuberculosis GM 1503]
gi|297632647|ref|ZP_06950427.1| MCE-family protein mce1A [Mycobacterium tuberculosis KZN 4207]
gi|297729622|ref|ZP_06958740.1| MCE-family protein mce1A [Mycobacterium tuberculosis KZN R506]
gi|306774259|ref|ZP_07412596.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu001]
gi|306782791|ref|ZP_07421113.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu003]
gi|306787158|ref|ZP_07425480.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu004]
gi|306791714|ref|ZP_07430016.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu005]
gi|306795758|ref|ZP_07434060.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu006]
gi|306801754|ref|ZP_07438422.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu008]
gi|306805965|ref|ZP_07442633.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu007]
gi|306974593|ref|ZP_07487254.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu010]
gi|313656948|ref|ZP_07813828.1| MCE-family protein mce1A [Mycobacterium tuberculosis KZN V2475]
gi|7478314|pir||D70904 probable mce1 protein - Mycobacterium tuberculosis (strain H37RV)
gi|41352742|emb|CAE55253.1| MCE-FAMILY PROTEIN MCE1A [Mycobacterium tuberculosis H37Rv]
gi|124603351|gb|EAY61626.1| MCE-family protein mce1A [Mycobacterium tuberculosis C]
gi|134152133|gb|EBA44178.1| MCE-family protein mce1A [Mycobacterium tuberculosis str. Haarlem]
gi|148504085|gb|ABQ71894.1| MCE-family protein Mce1A [Mycobacterium tuberculosis H37Ra]
gi|148719888|gb|ABR04513.1| MCE-family protein mce1A [Mycobacterium tuberculosis F11]
gi|253318594|gb|ACT23197.1| MCE-family protein mce1A [Mycobacterium tuberculosis KZN 1435]
gi|289437053|gb|EFD19546.1| MCE-family protein mce1A [Mycobacterium tuberculosis KZN 605]
gi|289711791|gb|EFD75807.1| MCE-family protein mce1A [Mycobacterium tuberculosis GM 1503]
gi|308217093|gb|EFO76492.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu001]
gi|308332311|gb|EFP21162.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu003]
gi|308336193|gb|EFP25044.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu004]
gi|308339693|gb|EFP28544.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu005]
gi|308343700|gb|EFP32551.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu006]
gi|308347573|gb|EFP36424.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu007]
gi|308351472|gb|EFP40323.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu008]
gi|308356148|gb|EFP44999.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu010]
gi|323717158|gb|EGB26367.1| MCE-family protein mce1A [Mycobacterium tuberculosis CDC1551A]
gi|328456878|gb|AEB02301.1| MCE-family protein mce1A [Mycobacterium tuberculosis KZN 4207]
gi|328864216|gb|AEB53191.1| MCE family protein 1A [Mycobacterium tuberculosis]
Length = 454
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 1 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 56
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 57 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 116
Query: 108 GITY 111
G Y
Sbjct: 117 GGKY 120
>gi|294635639|ref|ZP_06714115.1| paraquat-inducible protein B [Edwardsiella tarda ATCC 23685]
gi|291091022|gb|EFE23583.1| paraquat-inducible protein B [Edwardsiella tarda ATCC 23685]
Length = 545
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 41/409 (10%), Positives = 102/409 (24%), Gaps = 33/409 (8%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQ 104
L+ V F G+ VG + D + + DT + + + +
Sbjct: 164 SDKAGQLNPGDPVLFRGLRVGSVETSGFDTKARKITYQLFIAAPYDTLVTENVRFWVDSG 223
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD--SS 162
++ + T+ + +T N + I D +
Sbjct: 224 ISFDVSAQGMRVQMGSLATLLSGGVSFDVPQGLTPGKEVANMSDYVLYDNQSSIQDSLYT 283
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
H ++ + + + ++ + + + I
Sbjct: 284 EHFDMLMFFADSIRGLQVGAPVEFRGIRLGTVAQVPFFVKGLNQRLDADYRIPVLVHIEP 343
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + + I ++ + D T+ ++
Sbjct: 344 ERIDTNMGPDFDLRKHLLAIRHGGLRAALKSSNLLTGALYIDLDFYPNTKPWKG------ 397
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
S L + + + +A + + +
Sbjct: 398 --PDVIDGIPLMPTVSGGLAQLQQKVTAVLDKFNA--------LPLEPMVKSATATLKTS 447
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
D+ +K E + +N I + K SL D ++++ T + I
Sbjct: 448 QDTMRKTQETLDALNGILSSKAMQSLPADLRQSLIELNRTIKGIQP------------GS 495
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + ++ L + + L +V+ E + K PK
Sbjct: 496 PAYNQMVGDLQHLDQVLRELQPVLRTLNEKSNALVF--EAPAGKDPHPK 542
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 34/133 (25%), Gaps = 24/133 (18%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL---------FLDQEYPN 79
S + ++++ S+ GL + V F GI +G + + LD +Y
Sbjct: 276 SIQDSLYTEHFDMLMFFADSIRGLQVGAPVEFRGIRLGTVAQVPFFVKGLNQRLDADYRI 335
Query: 80 HSLAKALIR-------PDTPLYP--------STTATIRTQGLAGITYIELSTLRKEKKTI 124
L PD L A +++ L K
Sbjct: 336 PVLVHIEPERIDTNMGPDFDLRKHLLAIRHGGLRAALKSSNLLTGALYIDLDFYPNTKPW 395
Query: 125 FQIATERNQRAMI 137
M
Sbjct: 396 KGPDVIDGIPLMP 408
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 38/101 (37%), Gaps = 12/101 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + + +++ L ++ Y S + I + +G+ ++++
Sbjct: 15 RWSPVWI-IPILTALIGAWIIFYHFSHQG-------PEVTLITQNAEGIVAGKTAIKSRS 66
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ VG + + L + + + KA ++ L +T +
Sbjct: 67 VDVGTVESVTLS-DNLDQVMVKARLQSGMEKLLRKDSTFWV 106
>gi|254819662|ref|ZP_05224663.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 379
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 33/110 (30%), Gaps = 4/110 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ D V + S GL + V G+PVG++ + + +
Sbjct: 38 RSDEDTITVTAQF-DSASGLYEGNVVAVLGMPVGKVTKIN---AKGGYVEVDFTVDRHVK 93
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ A + + IEL+ + T+ T R S
Sbjct: 94 IPADAQAVTVSTSILTDRQIELTPPYHDGPTLQNHDTIGLPRTKTPVEFS 143
>gi|215433089|ref|ZP_03431008.1| virulence factor [Mycobacterium tuberculosis EAS054]
gi|289756234|ref|ZP_06515612.1| MCE-family protein mce1a [Mycobacterium tuberculosis EAS054]
gi|289696821|gb|EFD64250.1| MCE-family protein mce1a [Mycobacterium tuberculosis EAS054]
Length = 454
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 1 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 56
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 57 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 116
Query: 108 GITY 111
G Y
Sbjct: 117 GGKY 120
>gi|254436164|ref|ZP_05049671.1| mce related protein [Nitrosococcus oceani AFC27]
gi|207089275|gb|EDZ66547.1| mce related protein [Nitrosococcus oceani AFC27]
Length = 502
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/277 (12%), Positives = 83/277 (29%), Gaps = 20/277 (7%)
Query: 39 AEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT 98
+ +I SV GL ++V F G+ VG ++ + + +
Sbjct: 240 YKYVILFDDSVRGLYPGAAVEFRGVRVGTVLNVPFFGDDFG-------MEYSQTFRIPVL 292
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
Q LAG T + ++ + + P G+ I A + +
Sbjct: 293 IAFEPQRLAGTT-WAQFDQKAWQQHLNR------------LFPRGLRATIKAANLLTGAM 339
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ + E + + S+ LA+ I +++ + +
Sbjct: 340 FVDLAFTDQKGAHHEPAFQGQYPLLPSRSSGLASIEEKITRLLDKLNELELAPVLTKLQH 399
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
T+ ++K +D E + F + D++ T++ ++ + ++
Sbjct: 400 TLESTSEVMNKSQNTMDRLNSLLGSEAMGKLPTEFNATLDELRKTLNSYQQGAPVYDKLN 459
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
+ +D L ET + N
Sbjct: 460 RSLDRLNQVLDDLAPFVETLHNAPSALFFGDNAPEDP 496
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/394 (7%), Positives = 94/394 (23%), Gaps = 24/394 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ V + G VG+I + H D + + R+ GI
Sbjct: 124 LTIGDPVVYQGQEVGQIDTAEFNASALEMHYGVFIRAPFDALITENVQFWPRS----GII 179
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ S + + + I A +++ + +
Sbjct: 180 FEITSEGLQVQTGTLETMLAGGVTFGIPPDLKDGKQAEQGAIFRLYPSRQAAQQDRYDHQ 239
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
L + + +++ + I LI +
Sbjct: 240 YKYVILFDDSVRGLYPGAAVEFRGVRVGTVLNVPFFGDDFGMEYSQTFRIPVLIAFEPQR 299
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + +Q + N + ++ + +
Sbjct: 300 LAGTTWAQFDQKAWQQHL--NRLFPRGLRATIKAANLLTGAMFVDLAFTDQKGAHHEPAF 357
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + +A + ++ + +++ + ++ K
Sbjct: 358 QGQYPLLPSRSSGLASIEEKI-----TRLLDKLNELELAPVLTKLQHTLESTSEVMNKSQ 412
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
M ++N++ + L + + R T + + +
Sbjct: 413 NTMDRLNSLLGSEAMGKLPTEFNATLDELRKTLNSYQQ------------GAPVYDKLNR 460
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ +L + ++ + P + +G
Sbjct: 461 SLDRLNQVLDDLAPFVETLHNAPSALFFGDNAPE 494
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 42/429 (9%), Positives = 101/429 (23%), Gaps = 39/429 (9%)
Query: 47 GSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQ 104
+ +G+ + V+ + + VG + + L ++Y + D L T +
Sbjct: 4 DNAEGVEAGKTVVKLHNVDVGLVEKVRLSKDYTGAIAEVRMKADMDPLLVEDTQFWVAKP 63
Query: 105 --GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA-------ENTS 155
G GI+ + + A + +R + P I ++ S
Sbjct: 64 RVGREGISGLSTILSGVYIQMRPGNAQDPARRFQVLERPPTIRIHTEGLSLELVSTDDNS 123
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
I D + + + I+ A + +
Sbjct: 124 LTIGDPVVYQGQEVGQIDTAEFNASALEMHYGVFIRAPFDALITENVQFWPRSGIIFEIT 183
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD-VRETTQTF 274
+ T + + + + Q + D +
Sbjct: 184 SEGLQVQTGTLETMLAGGVTFGIPPDLKDGKQAEQGAIFRLYPSRQAAQQDRYDHQYKYV 243
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ L + + + L R + T
Sbjct: 244 ILFDDSVRGLYPGAAVEFRGVRVGTVLNVPFFGDDFGMEYSQTFRIPVLIAFEPQRLAGT 303
Query: 335 IENITSNL--NDSSQK-----FAELMSKINNISALKENNSLFKDAQRA------------ 375
+ + N ++ + F D + A
Sbjct: 304 TWAQFDQKAWQQHLNRLFPRGLRATIKAANLLTGAMFVDLAFTDQKGAHHEPAFQGQYPL 363
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ + I I + + L ++ ++ KLQ T+ + +N +
Sbjct: 364 LPSRSSGLASIEEKITRLLDKLNEL------ELAPVLTKLQHTLESTSEVMNKSQNTMDR 417
Query: 436 I--VWGREK 442
+ + G E
Sbjct: 418 LNSLLGSEA 426
>gi|117926651|ref|YP_867268.1| hypothetical protein Mmc1_3376 [Magnetococcus sp. MC-1]
gi|117610407|gb|ABK45862.1| Mammalian cell entry related domain protein [Magnetococcus sp.
MC-1]
Length = 559
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/400 (8%), Positives = 106/400 (26%), Gaps = 14/400 (3%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQ 104
++ + + + + + GI VG+++G LD L + +T +
Sbjct: 171 TANLGSMRSGTPILYRGIQVGKVLGHDLDSANNRVLLHVFIKSPYFDKIRSNTRFWNASG 230
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + +T+ + + + I + + + +
Sbjct: 231 LDLSVNADGFQLNTESVETLLTGGIAFDTPDSLDSKGDLQQGHIFPLYPSREAVEERIYE 290
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV--TPHSSDSKNTFNTITD 222
+ + + + +D M
Sbjct: 291 RKVRFVLFFEESVRGLRIGAPVEVRGIRVGRVLDVQMRFDPQVGRYPIVVLVEVEPERII 350
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
+ + K + V Q L + + ++ ++
Sbjct: 351 GDANAPRDDKQLLAAMVAQGLRARLKTGSLITGQLLVDLDWYPGEAVHLAGLASDYVELP 410
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
L ++ + + + S + + + Q + +E+ + +
Sbjct: 411 TLPTEIAEMTNAIKNVLVTLQKLPLESIGKELQETLAGLNRQVNS-----HAVEDAIAAV 465
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ + EL +++ +E + R++ + R + + ++
Sbjct: 466 SATMGHLNELSAQV-----SREVPMATQGVNRSLKALEAMLLQTKRTLS-VVESVVAPDA 519
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
+ ++ L E++PQ +++G+ K
Sbjct: 520 PLHDHAVATMKSLSAAAESLSSLATALEKDPQSLLFGKNK 559
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/259 (9%), Positives = 65/259 (25%), Gaps = 11/259 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--FLDQEYPNH-SLAKALIRPDTP 92
++ SV GL + V GI VGR++ + D + + + + P+
Sbjct: 290 ERKVRFVLFFEESVRGLRIGAPVEVRGIRVGRVLDVQMRFDPQVGRYPIVVLVEVEPERI 349
Query: 93 L-----YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI--- 144
+ + G+ + + + + + + S
Sbjct: 350 IGDANAPRDDKQLLAAMVAQGLRARLKTGSLITGQLLVDLDWYPGEAVHLAGLASDYVEL 409
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ + I + +QK+ I + T
Sbjct: 410 PTLPTEIAEMTNAIKNVLVTLQKLPLESIGKELQETLAGLNRQVNSHAVEDAIAAVSATM 469
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
S + + + L + + L ++ D + T+
Sbjct: 470 GHLNELSAQVSREVPMATQGVNRSLKALEAMLLQTKRTLSVVESVVAPDAPLHDHAVATM 529
Query: 265 HDVRETTQTFQEVGQKIDH 283
+ ++ + ++
Sbjct: 530 KSLSAAAESLSSLATALEK 548
Score = 38.4 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 4/72 (5%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ + WL+ E+ I + D + + V++ + VG + G+ L +
Sbjct: 31 ILATAYVVWLA-VAHVQAMGPEITITF-ANADAIQPGKTRVKYKSVDVGMVTGMQLS-DD 87
Query: 78 PNHSLAKALIRP 89
+ +
Sbjct: 88 LTQVEVRVRMDR 99
>gi|212709825|ref|ZP_03317953.1| hypothetical protein PROVALCAL_00873 [Providencia alcalifaciens DSM
30120]
gi|212687636|gb|EEB47164.1| hypothetical protein PROVALCAL_00873 [Providencia alcalifaciens DSM
30120]
Length = 549
Score = 61.5 bits (146), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/383 (10%), Positives = 96/383 (25%), Gaps = 15/383 (3%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
II L+ V F G VG + D + + + + P ++ +
Sbjct: 163 IILTSDKAGQLNAGDPVLFRGYRVGSVETSNFDMDQR---DMRYQLFINAPYDKLVSSNV 219
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
R +GI + S + NA+
Sbjct: 220 RFWKDSGIAFDMSSQGVHVSMGSVATLLTGGVSFDVPEGWVPGEAVKENAQFKLF----- 274
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+I+ L TT + + + + + +
Sbjct: 275 -----DTQSSIQDSLYTTYQDFVLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYTAGLD 329
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++ I ++ + + + + ++ + +
Sbjct: 330 QSLDNNFRIPVLIHIEPERFSKDVGKDFNLKNELNLAMKNGLRASLKSGNLLTGALYIDL 389
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + K + I + +
Sbjct: 390 DFIPDVPEYKGPYVIAGYKIIPTHSGGLAQIQQKVIAVLDKINNMPIEPMLKQTTQTLAE 449
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
Q+ + +++N + + KE SL D Q+++ T + P+ + +
Sbjct: 450 GQKLVQEANVMFTQLNKLMSSKEFQSLPTDMQKSLKEINKTMQGFQPGSPAYNKMVDDMQ 509
Query: 402 --QSGLNDIQNLVRKLQETVNHF 422
L ++Q L+R L N
Sbjct: 510 RLDQVLREVQPLLRTLNNKSNAL 532
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/251 (11%), Positives = 67/251 (26%), Gaps = 13/251 (5%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHSLAKALIRPD 90
+ ++ SV GL + V F GI +G + + + I P+
Sbjct: 288 YQDFVLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYTAGLDQSLDNNFRIPVLIHIEPE 347
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ + + + A + + Y I+
Sbjct: 348 -RFSKDVGKDFNLKNELNLAMKNGLRASLKSGNLLTGALYIDLDFIPDVPEYKGPYVIAG 406
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ ++ QK+I ++K I + +T + + + +
Sbjct: 407 YKIIPTHSGGLAQIQQKVIAVLDKINNMPIEPMLKQTTQTLAEGQKLVQEANVMFTQLNK 466
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
S F ++ + K I + N V ++ + +V+
Sbjct: 467 LMSSKEFQSLPTDMQKSLKEINKTMQGFQPG-----SPAYNKMVDDMQRLDQVLREVQPL 521
Query: 271 TQTFQEVGQKI 281
+T +
Sbjct: 522 LRTLNNKSNAL 532
>gi|241759781|ref|ZP_04757881.1| paraquat-inducible protein B [Neisseria flavescens SK114]
gi|241319789|gb|EER56185.1| paraquat-inducible protein B [Neisseria flavescens SK114]
Length = 553
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/388 (8%), Positives = 96/388 (24%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + VG+I D + H D + ++ + + T
Sbjct: 177 LNVSSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLINSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGVKLNSAPLPALLSGAISFDSPKTSDSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGL---SAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISNNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDKTVAGLNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/276 (12%), Positives = 84/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GLS S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLSAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I+
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISNNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + +++ +
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDKTVAGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 42/448 (9%), Positives = 121/448 (27%), Gaps = 34/448 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L + L + + GP+ +++ S +G+ +++V + + VGR+ + L
Sbjct: 28 LIPLIALIAGGWLLVKDIRNRGPVVTLLM---DSAEGIEVNNTVIKVLNVDVGRVTRIKL 84
Query: 74 DQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ A+ + T + + L TL F +
Sbjct: 85 RDDQKGVEVTAQLSADAKDLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSQE 144
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + I + I + R + + + +
Sbjct: 145 TKDVFVVQDIPPIAAIGQSGLRLNLIGKNDRILNVSSPVLYENFMVGQIESAHFDPSDQS 204
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
I ++ +S + S K+ A ++ + +++
Sbjct: 205 VHYTIFIQSPNDKLINSASRFWLESGINIETTGSGVKLNSAPLPALLSGAISFDSPKTSD 264
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQ--------------------KIDHLLSDFSSKM 292
+ T++D R + + L S +
Sbjct: 265 SKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLSAGSPVEYKGLNVGVVSDV 324
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + L + +R I R + ++ N ++
Sbjct: 325 PYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISNNN 384
Query: 353 MSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIPSIGNNLQNF-SQS 403
+ + + L + S + + T + + + + + N
Sbjct: 385 LLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDK 444
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + +L+ T+ + L++ ++
Sbjct: 445 TVAGLNGSLAELKSTLKSANAALSSIDK 472
>gi|260185032|ref|ZP_05762506.1| virulence factor [Mycobacterium tuberculosis CPHL_A]
gi|289445700|ref|ZP_06435444.1| MCE-family protein mce1A [Mycobacterium tuberculosis CPHL_A]
gi|289418658|gb|EFD15859.1| MCE-family protein mce1A [Mycobacterium tuberculosis CPHL_A]
Length = 454
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 1 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 56
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 57 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 116
Query: 108 GITY 111
G Y
Sbjct: 117 GGKY 120
>gi|215406162|ref|ZP_03418343.1| virulence factor [Mycobacterium tuberculosis 02_1987]
gi|215414034|ref|ZP_03422693.1| virulence factor [Mycobacterium tuberculosis 94_M4241A]
gi|215425376|ref|ZP_03423295.1| virulence factor [Mycobacterium tuberculosis T92]
gi|215448448|ref|ZP_03435200.1| virulence factor [Mycobacterium tuberculosis T85]
gi|260199172|ref|ZP_05766663.1| virulence factor [Mycobacterium tuberculosis T46]
gi|260203314|ref|ZP_05770805.1| virulence factor [Mycobacterium tuberculosis K85]
gi|289441544|ref|ZP_06431288.1| MCE-family protein mce1A [Mycobacterium tuberculosis T46]
gi|289572749|ref|ZP_06452976.1| MCE-family protein mce1A [Mycobacterium tuberculosis K85]
gi|289747936|ref|ZP_06507314.1| MCE-family protein mce1a [Mycobacterium tuberculosis 02_1987]
gi|289748645|ref|ZP_06508023.1| MCE-family protein mce1A [Mycobacterium tuberculosis T92]
gi|289760271|ref|ZP_06519649.1| MCE-family protein mce1a [Mycobacterium tuberculosis T85]
gi|294994643|ref|ZP_06800334.1| virulence factor [Mycobacterium tuberculosis 210]
gi|298527561|ref|ZP_07014970.1| mycobacterial cell entry protein [Mycobacterium tuberculosis
94_M4241A]
gi|289414463|gb|EFD11703.1| MCE-family protein mce1A [Mycobacterium tuberculosis T46]
gi|289537180|gb|EFD41758.1| MCE-family protein mce1A [Mycobacterium tuberculosis K85]
gi|289688464|gb|EFD55952.1| MCE-family protein mce1a [Mycobacterium tuberculosis 02_1987]
gi|289689232|gb|EFD56661.1| MCE-family protein mce1A [Mycobacterium tuberculosis T92]
gi|289715835|gb|EFD79847.1| MCE-family protein mce1a [Mycobacterium tuberculosis T85]
gi|298497355|gb|EFI32649.1| mycobacterial cell entry protein [Mycobacterium tuberculosis
94_M4241A]
gi|326905926|gb|EGE52859.1| MCE-family protein mce1A [Mycobacterium tuberculosis W-148]
Length = 454
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 1 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 56
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 57 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 116
Query: 108 GITY 111
G Y
Sbjct: 117 GGKY 120
>gi|108798623|ref|YP_638820.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867719|ref|YP_937671.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126434220|ref|YP_001069911.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|108769042|gb|ABG07764.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693808|gb|ABL90881.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126234020|gb|ABN97420.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 448
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++ + + L+ N+ P V + S L +S V+ G+ +GR+ +
Sbjct: 17 MLLVTGIVAAVVLSLAMFNRTFTPTVPVTLTADRSGLMLEPNSRVKMRGVQIGRVSAVT- 75
Query: 74 DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATE 130
+ + I PD + + A I++ L G Y++ + + + A
Sbjct: 76 ---GGDAPRIQLAIDPDQIRHIPANVEARIQSISLFGAKYVDLVYPPDPSPQRLSAGAVL 132
Query: 131 RNQR 134
+Q
Sbjct: 133 TSQN 136
>gi|117164588|emb|CAJ88134.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
Length = 339
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 34/104 (32%), Gaps = 4/104 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
D + +V G+ S +R G+ VG + + + + +
Sbjct: 25 RALDDGGTRITAYFDRAV-GIYAGSDLRVLGVRVGEVESVRPEG---TRVRVELDLDDGV 80
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ S A + + Y++L+ + +T+ A R
Sbjct: 81 RVPASARALVIAPSVVADRYVQLTPAYRSGRTLTDGAVLPASRN 124
>gi|315633781|ref|ZP_07889071.1| ABC superfamily ATP binding cassette transporter, binding protein
[Aggregatibacter segnis ATCC 33393]
gi|315477823|gb|EFU68565.1| ABC superfamily ATP binding cassette transporter, binding protein
[Aggregatibacter segnis ATCC 33393]
Length = 168
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/126 (19%), Positives = 51/126 (40%), Gaps = 2/126 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VGLF++ + F ++ + + I ++ GL + ++ G+ VG
Sbjct: 8 EFWVGLFLLLGIGSLIFLGLKVANVQGFSETKSYRIYATFDNIGGLKVRAPLKVGGVVVG 67
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
R+ + LD + I + + +++ +I+T GL G YI LS + +
Sbjct: 68 RVSEIELDPQSY-LPKVTIAINQEYNKIPETSSLSIKTAGLLGEQYIALSIGFDDGEIAM 126
Query: 126 QIATER 131
++
Sbjct: 127 LKDGDK 132
>gi|254820124|ref|ZP_05225125.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 419
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/311 (10%), Positives = 80/311 (25%), Gaps = 9/311 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
II + +G+ V G+PVG+I + + + + A I
Sbjct: 15 IIGYFANSNGVFAGDEVLILGVPVGKIAKIEPQPQ---RVKITFWYDRKYKVPANVKAVI 71
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ L I+L+ + A +R + + + T +
Sbjct: 72 VSPALVTSRAIQLTPAYAAGPALRNNAVIPEERTAVPVEWDDLRTQLDKLTQTLQPTQPG 131
Query: 162 SRHI-----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+N+ T + +S + H + T + + +
Sbjct: 132 GVAPLGSLINTAADNLRGQGTDIRDTVIKLSQAFSVLGDHSSDIFGTVKSLATIVSALQS 191
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + + + +++ I+ V + T+
Sbjct: 192 SSDSMSQLNRNLAFVTGLLANDPDEVAAAIRDLDTAAGDVQRFVAENRAAIGVTSDKLAS 251
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLE-NIADSTSNMRSSISAIREITDQRQKIISTINTI 335
+ + L D + T+ NI T + A+ D + +
Sbjct: 252 LSGTVTDSLDDIKQTLHVLPTALANYTNIWQPTQGAITGALAVNNFADPISFLCGAVQAA 311
Query: 336 ENITSNLNDSS 346
+ S
Sbjct: 312 SRLNSQQAAKL 322
>gi|120401522|ref|YP_951351.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|145221251|ref|YP_001131929.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315441854|ref|YP_004074733.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|119954340|gb|ABM11345.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|145213737|gb|ABP43141.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315260157|gb|ADT96898.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 448
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++ + + L+ N+ P V + S L +S V+ G+ +GR+ +
Sbjct: 17 MLLVTGIVAAVVLSLAMFNRTFTPTVPVTLTADRSGLMLEPNSRVKMRGVQIGRVSAVT- 75
Query: 74 DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATE 130
+ + I PD + + A I++ L G Y++ + + + A
Sbjct: 76 ---GGDAPRIQLAIDPDQIRHIPANVEARIQSISLFGAKYVDLVYPPDPSPQRLSAGAVL 132
Query: 131 RNQR 134
+Q
Sbjct: 133 TSQN 136
>gi|240170394|ref|ZP_04749053.1| MCE-family protein [Mycobacterium kansasii ATCC 12478]
Length = 469
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/325 (11%), Positives = 88/325 (27%), Gaps = 15/325 (4%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ + + VR +GI VG I + + + + D
Sbjct: 28 RNTFFRPKTITAYFTKT-TAIYPGDDVRVSGIKVGTITAIHPEGTT---AKMVMHVDHDV 83
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA--TERNQRAMITATPSGINYFIS 149
P+ A I Q L Y++L+ + ++ A+ + +
Sbjct: 84 PIPADAKAVIVAQNLVAARYVQLTPAYRSSGPTMPDGAVIPVDRTAIPVEWDEVKDQLMR 143
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
A S+ + + I++ L A + L+ +
Sbjct: 144 LATELGPNSKVSTPSVARFIDSAATALGGNGAKLRQTLAELSGVGRVLADGSGNIVDIIK 203
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ + ++ + A ++ ++ + + + +V + R+
Sbjct: 204 NLQTFVKVLRDSNQQLVVFNNQLATLTSVLDDNKSDLDAALTDLAGAVGEVQRFIAQTRD 263
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
T + +L D L+NI T N ++ E +
Sbjct: 264 PTSEQIARLADLTQILVD---------NKMALKNILHVTPNALANAYNDYEPDMGAIRGA 314
Query: 330 STINTIENITSNLNDSSQKFAELMS 354
TIN N + + +
Sbjct: 315 FTINNTANSVNLYCSQLGAIENVTA 339
>gi|309378443|emb|CBX22938.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 553
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 85/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGAVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + +++ +
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQAKVADLLDKFNNLPLDKTVAGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLTELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/388 (7%), Positives = 98/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPVLLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + L + +
Sbjct: 297 FFKQSVRGLTVGSPVEYKGLNVGAVSDVPYFDRNDSLHLFENGWIPVRIRIE-------- 348
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ E + +++ T T ++ + D +
Sbjct: 349 ----PSRLEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKL 404
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + + A + T+ + + L + +
Sbjct: 405 RPHTVYAGDTVIATRGGGLDDLQAKVADLLDKFNNLPLDKTVAGLNGSLTELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRTTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 46/461 (9%), Positives = 122/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPVLL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGAVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATRGGGLDDLQAKVA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + N + + + +L+ T+ + L++ ++
Sbjct: 432 DLLDKFNNLPLDKTVAGLNGSLTELKSTLKSANAALSSIDK 472
>gi|54027023|ref|YP_121265.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018531|dbj|BAD59901.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 371
Score = 61.1 bits (145), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/287 (9%), Positives = 73/287 (25%), Gaps = 12/287 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+Y G + +V GL + V G+PVGR+ + ++ +
Sbjct: 36 GLPEEYLGEKLRISADF-ENVAGLYAGNEVAVLGVPVGRVDTVTP---KGSYVQVTMSLD 91
Query: 89 PDTPLYPSTTATIRTQGLAGITYI-----ELSTLRKEKKTIFQIATERNQRAMITATPSG 143
D + A + + L ++ +
Sbjct: 92 KDVRVPADAMAALVSPQLITNRHVELAPAYTGDGPTLADGDHIPLARTRVPVELDRILEN 151
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ + + +++ +SR + +++ L T+ + V N I +
Sbjct: 152 FDQLGAALKGDNQEGPMASRVLFPLLDGNGDRLRETLDELAGAFEVTFANKDQISNTIIK 211
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+ + + + ++ +L + N V
Sbjct: 212 LNEITQVIAANDQTVRDFSGRLTELVQLMGEQAPGLHAVLTQLNDFVANTSAV---VGQN 268
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
+ F + +++ + + A S +
Sbjct: 269 QDQLAGALTRFVAITEQMRANARQLTEIVDVTPLFFENLANATSFEH 315
>gi|289568068|ref|ZP_06448295.1| LOW QUALITY PROTEIN: MCE-family protein mce1A [Mycobacterium
tuberculosis T17]
gi|289541821|gb|EFD45470.1| LOW QUALITY PROTEIN: MCE-family protein mce1A [Mycobacterium
tuberculosis T17]
Length = 452
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 1 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 56
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 57 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 116
Query: 108 GITY 111
G Y
Sbjct: 117 GGKY 120
>gi|113969025|ref|YP_732818.1| hypothetical protein Shewmr4_0681 [Shewanella sp. MR-4]
gi|114048830|ref|YP_739380.1| hypothetical protein Shewmr7_3341 [Shewanella sp. MR-7]
gi|113883709|gb|ABI37761.1| Mammalian cell entry related domain protein [Shewanella sp. MR-4]
gi|113890272|gb|ABI44323.1| Mammalian cell entry related domain protein [Shewanella sp. MR-7]
Length = 157
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 52/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+F+++ L ++ ++ + + ++ GL S V+
Sbjct: 1 MLTRKIELLVGVFLLAGLAAFLVLVFKVANIEVQTSDSSYTLTANFTNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-- 118
G+ VGR+ + LD + + + +++ I T GL G ++ L+
Sbjct: 61 GGVVVGRVSKIDLDPVKLVAVVTIVMDKRYDKFPETSSLAILTSGLLGEQFLGLTPGFVD 120
Query: 119 KEKKTIFQIATERNQR 134
+ + + R
Sbjct: 121 DDVSMLKDGDKIDDTR 136
>gi|311743972|ref|ZP_07717778.1| MCE-family protein Mce6F [Aeromicrobium marinum DSM 15272]
gi|311313102|gb|EFQ83013.1| MCE-family protein Mce6F [Aeromicrobium marinum DSM 15272]
Length = 361
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 35/112 (31%), Gaps = 4/112 (3%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+Y A+V + + + GL S V + G+ VGR+ +
Sbjct: 24 VYLYQGFLRGSVTERPAQVTVSLAET-GGLFESSGVTYRGVRVGRVDAIR---TTDTGVE 79
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
I P + + + A +R AG +++ E R
Sbjct: 80 VVLSIEPGSEVPADSVAVVRLLSPAGEQFLDFQPDDHEPPYFADGDRISADR 131
>gi|226505184|ref|NP_001151938.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Zea mays]
gi|195651235|gb|ACG45085.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Zea mays]
Length = 373
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/272 (10%), Positives = 80/272 (29%), Gaps = 8/272 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS ++ WL + G+ + VR G+ VG +V
Sbjct: 91 VGLFMVSGAALLALALAWLRGFQLRSRFRKYNTVFEFTQACGICVGTPVRIRGVTVGSVV 150
Query: 70 GLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ A + + ++ + GL T I+++ + +
Sbjct: 151 RVD---SSLRSIDATVEVGDDKIIIPRNSVVEVNQSGLLMETLIDITPKDP----LPAPS 203
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
I + + + + + E ++ + E +++
Sbjct: 204 VGPLDPNCIKEGLILCDKERMKGQQGVSLDALVGIFTRLGRDMEEIGVSKSYKLAEKVAS 263
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ + ++ + + + D+ T + A + +
Sbjct: 264 IMEEAQPLLTRIEDLAEEMQPLLSEVGDSDLLKDVETIAKGLADASVDLRRLKSSMLTPE 323
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+++ +S +I T+ ++ +
Sbjct: 324 NTDLIKQSIFTLIFTLKNIESISSDISGFTGD 355
>gi|169630028|ref|YP_001703677.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169241995|emb|CAM63023.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 364
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/128 (14%), Positives = 34/128 (26%), Gaps = 3/128 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
V + I + + S GL S+V G+ VG + + +
Sbjct: 4 VVPVLAMVAVICGVGALWPTQHRRYITVTAQFDSAAGLYPGSTVAVLGMRVGSVEKITPE 63
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
+ + + L A + + IEL+ + + T R
Sbjct: 64 G---GYVEVEFTVDRQVALPADVQAVTISTSILTDRQIELTPPYRGGAVMHDNETIGLNR 120
Query: 135 AMITATPS 142
S
Sbjct: 121 TKTPVEFS 128
>gi|31791347|ref|NP_853840.1| MCE-family protein MCE1A [Mycobacterium bovis AF2122/97]
gi|121636081|ref|YP_976304.1| MCE-family protein mce1A [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988554|ref|YP_002643241.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|5814111|gb|AAD52105.1|AF113402_1 mycobacterial cell entry protein [Mycobacterium bovis BCG]
gi|31616932|emb|CAD93039.1| MCE-FAMILY PROTEIN MCE1A [Mycobacterium bovis AF2122/97]
gi|121491728|emb|CAL70190.1| MCE-family protein mce1A [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224771667|dbj|BAH24473.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length = 454
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 44/124 (35%), Gaps = 17/124 (13%)
Query: 1 MES--KNYYTSV------GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
M + K V GL +V + +Y + P ++ + GL
Sbjct: 1 MTTPGKLNKARVPPYKTAGLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGL 56
Query: 53 --STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLA 107
S V +NG+ +GR+ + + ++ + + + P + + A I+ +
Sbjct: 57 VMDPGSKVTYNGVEIGRVDTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVF 116
Query: 108 GITY 111
G Y
Sbjct: 117 GGKY 120
>gi|152982043|ref|YP_001353648.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Janthinobacterium sp.
Marseille]
gi|151282120|gb|ABR90530.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Janthinobacterium sp.
Marseille]
Length = 327
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 49/128 (38%), Gaps = 7/128 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E K V F+V ++ S + + + + ++ + DG+S + F+
Sbjct: 27 EFKAAILLV--FLVVLIASSVAYLMYARGA----FEATQELVLLADDSDGVSVGMDLTFS 80
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G PVGRI + L ++ L + L S+ T+ +G+ G T I T
Sbjct: 81 GFPVGRINRIELGKDGKARILVAIAKKDAHWLRTSSIFTME-RGIVGSTRIRAFTGVPND 139
Query: 122 KTIFQIAT 129
+ A
Sbjct: 140 PPLEAGAE 147
>gi|49072910|gb|AAT51761.1| TrnC1 [Mycobacterium vanbaalenii PYR-1]
Length = 451
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 7/124 (5%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++ + + L+ N+ P V + S L +S V+ G+ +GR+ +
Sbjct: 20 MLLVTGIVAAVVLSLAMFNRTFTPTVPVTLTADRSGLMLEPNSRVKMRGVQIGRVSAVT- 78
Query: 74 DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATE 130
+ + I PD + + A I++ L G Y++ + + + A
Sbjct: 79 ---GGDAPRIQLAIDPDQIRHIPANVEARIQSISLFGAKYVDLVYPPDPSPQRLSAGAVL 135
Query: 131 RNQR 134
+Q
Sbjct: 136 TSQN 139
>gi|126436742|ref|YP_001072433.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236542|gb|ABN99942.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 484
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/121 (18%), Positives = 38/121 (31%), Gaps = 18/121 (14%)
Query: 1 MESKNY--------YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL 52
MES+ + +T + L VV + S + ++ V + + GL
Sbjct: 1 MESRRHDRALHPAWWTLI-LLVVLVTIVMVTSAMFAGTFKRF------VPVTLTSDRSGL 53
Query: 53 --STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
V+ G+ VGR+ + P + + A IR G
Sbjct: 54 VMEPGGKVKLRGVVVGRVSEIT-GGNDPVRLKLDLFPDQIKYIPANVEARIRATTAFGAK 112
Query: 111 Y 111
Y
Sbjct: 113 Y 113
>gi|88812232|ref|ZP_01127483.1| paraquat-inducible protein B [Nitrococcus mobilis Nb-231]
gi|88790483|gb|EAR21599.1| paraquat-inducible protein B [Nitrococcus mobilis Nb-231]
Length = 547
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/405 (6%), Positives = 99/405 (24%), Gaps = 33/405 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
LST + + G+ VGR+ D E + D+ + +T + +
Sbjct: 171 LSTGDPIFYEGLTVGRVESTQFDSEARRITHQVFIQAPYDSLVTSTTRFWTASGINVDVG 230
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +++ E+ + S ++
Sbjct: 231 AGGVKVNFESLESLIGGGITFGVP-----------------EDVPQGQPVKSGATYELYP 273
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + ++ + + ++ + + ++ ++
Sbjct: 274 DRASAREGSFDRFIEYVLLVEDTVRGLEAGAPVEYRGVRVGTVVSVLWDLRAGRANVVQL 333
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI---DHLLSD 287
+ ++ Q +E S +R + +T + + + +
Sbjct: 334 TIPVLIRIELQRVERGASDMTLAQWRSRVERLMKRGLRASLKTSNLLTGSLFVDINFYPN 393
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + I ++ + +
Sbjct: 394 APAYKPQTFHDRQVFPTVSTGVAQIEQKITSLLDKLNALNIEQILDKLNRNLEVSRAALA 453
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ A+ +N + + ++ + + R T + +
Sbjct: 454 QLAKTTQTVNGLLDDQATQAMPNNLNETLVELRKTMQGFSG------------DSEAYQR 501
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
+ + +L + + P +++ + + + H
Sbjct: 502 LTTTLERLDALMQELQPMARTLRKQPNALIFDKRERPDPQPRAFH 546
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/284 (9%), Positives = 75/284 (26%), Gaps = 20/284 (7%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
E ++ + +V GL + V + G+ VG +V + D ++ + I
Sbjct: 281 GSFDRFIEYVLLVEDTVRGLEAGAPVEYRGVRVGTVVSVLWDLRAGRANVVQLTI----- 335
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
I Q + +A R++ + + SN
Sbjct: 336 ---PVLIRIELQRVERGASD------------MTLAQWRSRVERLMKRGLRASLKTSNLL 380
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
S + + + + T + I+ + ++ +
Sbjct: 381 TGSLFVDINFYPNAPAYKPQTFHDRQVFPTVSTGVAQIEQKITSLLDKLNALNIEQILDK 440
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ L K + ++ +Q + + + N + + + E Q
Sbjct: 441 LNRNLEVSRAALAQLAKTTQTVNGLLDDQATQAMPNNLNETLVELRKTMQGFSGDSEAYQ 500
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
+++D L+ + ++ +
Sbjct: 501 RLTTTLERLDALMQELQPMARTLRKQPNALIFDKRERPDPQPRA 544
Score = 38.4 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 35/455 (7%), Positives = 104/455 (22%), Gaps = 30/455 (6%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + V + + +I + +G+ + ++
Sbjct: 16 RISPIWI----VPAVAILIGLWMVYNG----FVNRGPLITLEMQNAEGIEAGKTPIKTRN 67
Query: 63 IPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRK 119
+ +GR+ + L ++ A+ + + L T + G GI+ +
Sbjct: 68 VEIGRVETVHLSKDFSHTIIEARLNVGSERMLNTETQFWVVKPRIGREGISGLGTVLSGA 127
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
K A + + P +S I +
Sbjct: 128 YIKLQPGHAETPQRDFKVLEQPPVAPPDAKGLRLKLISGLGNSLSTGDPIFYEGLTVGRV 187
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + I + + + + N L
Sbjct: 188 ESTQFDSEARRITHQVFIQAPYDSLVTSTTRFWTASGINVDVGAGGVKVNFESLESLIGG 247
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQ-TFQEVGQKIDHLLSDFSSKMKSKETS 298
+ S D + +F + + +
Sbjct: 248 GITFGVPEDVPQGQPVKSGATYELYPDRASAREGSFDRFIEYVLLVEDTVRGLEAGAPVE 307
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-- 356
+ S + + + ++ I + + ++ + ++
Sbjct: 308 YRGVRVGTVVSVLWDLRAGRANVVQLTIPVLIRIELQRVERGASDMTLAQWRSRVERLMK 367
Query: 357 NNISALKENNSLFKDAQRAMHTF--------------RDTSEKINRYIPSIGNNLQNFSQ 402
+ A + ++L + F R ++ + I + +
Sbjct: 368 RGLRASLKTSNLLTGSLFVDINFYPNAPAYKPQTFHDRQVFPTVSTGVAQIEQKITSLLD 427
Query: 403 SGLN-DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+I+ ++ KL + L + Q +
Sbjct: 428 KLNALNIEQILDKLNRNLEVSRAALAQLAKTTQTV 462
>gi|54027021|ref|YP_121263.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018529|dbj|BAD59899.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 393
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 34/315 (10%), Positives = 86/315 (27%), Gaps = 9/315 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+V + + + + L+ P + + GL ++ V F G V
Sbjct: 12 RRVAVANLGLVAVLLAGSAYLGLAVLRINPLPDTYTVTVELKNSGGLLANNDVTFRGSRV 71
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
GR+ + + + +A+A I+ + T + AG Y++ +
Sbjct: 72 GRVAEVRVAEVG---IVAEAEIQSWAKIPVGGTVAVGRLSAAGEQYLDFRPDADSGPYLR 128
Query: 126 QIA-TERNQRAMITATPSGINYFISNAENTSK-----KISDSSRHIQKIIENIEKPLTTT 179
E + PS ++ + I + + + + + ++
Sbjct: 129 DGDVVEVARTTTPVTVPSVLDNMSGLIGGMNPARLNVIIDELDKALAGGPDRLRNMISGI 188
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + +L I+ + T H+ T T + + +
Sbjct: 189 SRAMAGLDELLPQTRQLIENLEIIADTTSHAQPDLTTLTTGAGALFEQLTAADQELRRFL 248
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + + D + N + T+ + I+ L + + A
Sbjct: 249 DLAPGQLATVGGFIADTEDPITNLTTNFVAITRAAKLRQPAIEALFPALRAGSAAIGVPA 308
Query: 300 FLENIADSTSNMRSS 314
Sbjct: 309 HDGAYHTLVDPWPRP 323
>gi|41406857|ref|NP_959693.1| hypothetical protein MAP0759 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395207|gb|AAS03076.1| hypothetical protein MAP_0759 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 420
Score = 61.1 bits (145), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/275 (9%), Positives = 77/275 (28%), Gaps = 7/275 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVG 66
+GL + I+ F V + GL + D+ V+ G+ VG
Sbjct: 34 LLGLATILIIGLIFAVAV--GLFQGSFTETVPVTVISQR--AGLVMNPDAKVKMRGVQVG 89
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT-YIELSTLRKEKKTIF 125
++ + + + I + + G + + + +
Sbjct: 90 KVASIESLPNGQAAIHLAMDPSQMHFIPSNVLVDIASSTVFGAKSIQLVEPAQPSAQRLR 149
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
T + Q M+ + K+++S + + L +++++++
Sbjct: 150 AGQTLQGQHVMVEINTVFQELVSVLSHIDPPKLNESLGALAQAFSGRGPQLGQSLSDLDS 209
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
L ++S + ++ T + + ++ +L +
Sbjct: 210 FLARLEPSLSAFRHDLSVLPTVSNAYADAAPDLVKTAANATRISKTLVDEQHNLDALLIS 269
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
++ + +V ++ +
Sbjct: 270 AIGLADIGNDVLSTNRQPLTNVLHLLVPTTDLTNE 304
>gi|238792367|ref|ZP_04636001.1| Paraquat-inducible protein B [Yersinia intermedia ATCC 29909]
gi|238728293|gb|EEQ19813.1| Paraquat-inducible protein B [Yersinia intermedia ATCC 29909]
Length = 541
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/281 (13%), Positives = 80/281 (28%), Gaps = 16/281 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + + V F GI VG + + + +
Sbjct: 271 SIQNSLFTEHEDFLLFFSDSVRGLQSGAPVEFRGIRVGTVADVPFFTKGMRQ-----RVD 325
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + I + A ER RA + +
Sbjct: 326 NDFRIP----VLIRIEP---GRFRDDLGPDTNFAQILKTAKERGLRASMKSGNLLTGALF 378
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + D+ + L T + I L + I+ + V
Sbjct: 379 VDLDFY----PDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKLMQTLDKINSLPLDPMVNE 434
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + T+ + +L + + + +++Q + N +S
Sbjct: 435 VTKTLAESQKTMRETQKTLAALTAITSSPAMQDLPKDLQKTLNELNRSMKGFQPGSPAYN 494
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ Q + Q + L + + F +
Sbjct: 495 KMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQ 535
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/408 (11%), Positives = 96/408 (23%), Gaps = 30/408 (7%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 158 SEQAGQLNAGDPVLFRGYRVGSVETSTFDAKSR---------------------LMRYQL 196
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
G Y L T +A + + + M S F SD + I
Sbjct: 197 FIGAPYDSLVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGSDLGKPI 256
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT-DLI 224
+ + + + D + P
Sbjct: 257 TAAKAEFKLFDNRSSIQNSLFTEHEDFLLFFSDSVRGLQSGAPVEFRGIRVGTVADVPFF 316
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-H 283
T + D + I ++ ++ + + G +
Sbjct: 317 TKGMRQRVDNDFRIPVLIRIEPGRFRDDLGPDTNFAQILKTAKERGLRASMKSGNLLTGA 376
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
L D +K LE S A + + ++ + + +
Sbjct: 377 LFVDLDFYPDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKLMQTLDKINSLPLDPMVNEVT 436
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+ + + M + A + Q + T ++NR +
Sbjct: 437 KTLAESQKTMRETQKTLAALTAITSSPAMQDLPKDLQKTLNELNRSMKGFQP-----GSP 491
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + +++L + + L +V+ E + +PK
Sbjct: 492 AYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 537
>gi|261339278|ref|ZP_05967136.1| hypothetical protein ENTCAN_05517 [Enterobacter cancerogenus ATCC
35316]
gi|288319138|gb|EFC58076.1| paraquat-inducible protein B [Enterobacter cancerogenus ATCC 35316]
Length = 546
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 43/403 (10%), Positives = 100/403 (24%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDPQKR-----TISYQLFINAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T + P GI+ AE T+ ++ D + IQ
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG-GVSFDVPEGIDIGQPVAEKTAFRLFDDQKSIQDA 280
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + A ++ + ++
Sbjct: 281 LYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRL-------GTVGQVPFFVPGLRQVLDDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ I ++ I + + + ++ + +D
Sbjct: 334 RIPVLIRIEPERLINQIGENQDIGAHITELMNRGLRGSLKTGNLVTGALYVDMDFYPKAP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + + S + I N S + ++
Sbjct: 394 AITGQREFGGYKIIPTVSSGLAQIQQRLMDTLDKINNLPLNPMIEAATNSLSQSQATMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ IN I+A + L +D Q+ + + + + N +
Sbjct: 454 LQTTLDNINKITASQSMQQLPQDMQKTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/269 (9%), Positives = 74/269 (27%), Gaps = 23/269 (8%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ ++ SV GL + V F GI +G + + + D +
Sbjct: 283 TDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVGQVPFFVPGLRQV-----LDDDYRIP- 336
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
I + L + + + + + +
Sbjct: 337 -VLIRIEPERLINQIGENQDIGAHITELMNRG----------------LRGSLKTGNLVT 379
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ K + I T+S+ LA + + P + +
Sbjct: 380 GALYVDMDFYPKAPAITGQREFGGYKIIPTVSSGLAQIQQRLMDTLDKINNLPLNPMIEA 439
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
N+++ ++ ++ +D +++Q + K+ ++ ++ + + +
Sbjct: 440 ATNSLSQSQATMRRLQTTLDNINKITASQSMQQLPQDMQKTLRELNRSMQGFQPGSAAYN 499
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENI 304
++ + L +T N
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNA 528
>gi|120405349|ref|YP_955178.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958167|gb|ABM15172.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 439
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/270 (11%), Positives = 79/270 (29%), Gaps = 9/270 (3%)
Query: 39 AEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT 98
+++ S G+ V G+ VG I + + + + + +
Sbjct: 37 TQLVAYF-DSSTGIYPGDDVLILGVKVGEIESIEPEP---HQVGITFNVADEYQIPAGVH 92
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK-- 156
A I + L I+L+ E TI AT +R + + + ++ +
Sbjct: 93 AAIISPQLVTARAIQLTPAYTEGPTIGNDATIPLERTAVPVEYDDLRVQLQKLSDSMQPS 152
Query: 157 ---KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
++S I +N+ + +S ++ H D + T + +
Sbjct: 153 GSGQLSPVGEFINTAAKNLRGQGDQMRKAVIELSQAMSAFGDHSDDVFGTVEDLSVLVSA 212
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ + + S + + ++ + I ++ V + T+
Sbjct: 213 LQSSTVLMRELNSNLAGVTEVLSNDPGEVGQAIAAIDAVSTDITNFVAEHREPLGTATEK 272
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
F + + D + N
Sbjct: 273 FSSISTALVESTDDIKQILHLAPNVLSNYN 302
>gi|308186293|ref|YP_003930424.1| Paraquat-inducible protein B [Pantoea vagans C9-1]
gi|308056803|gb|ADO08975.1| Paraquat-inducible protein B [Pantoea vagans C9-1]
Length = 547
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/402 (8%), Positives = 90/402 (22%), Gaps = 27/402 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D + + Q
Sbjct: 168 AGQLNPGDPVLFRGYRVGTVETSVFDTDKR---------------------MMTYQLFVA 206
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + + M S F + +Q
Sbjct: 207 APYDRLITTNVRFWKDSGIAVDMSASGMRVEMGSLTTLFSGGVSFDVPDGWELGEPVQNK 266
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + + + L+ +
Sbjct: 267 SDYHLFDDQRSIQDSLYTNHIDYVMFFSDSIRGLQAGAPVEFRGIRLGTVSEAPLMKAGL 326
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
D + I + ++ D + + + + G + L D
Sbjct: 327 DQALNNDYRVPVLIRIEPDRFISRLGENFDLEQHLQDGKKRGLRATLKTGNLLSGALYVD 386
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + S + + + + + + +
Sbjct: 387 LDFYDNAPAYKGPQKVSGYEVIPTVSGGLSQIQQKLMAALDKINSLPLNGMVNEATGTLK 446
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + M + + + + T ++NR + + +
Sbjct: 447 ESQKTMRDLQRTIDNINKVTASPAMKTLPEDLQQTLRELNRSMKGLQP-----GSPAYSK 501
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ +++L + + L +V+ + G K
Sbjct: 502 LVGDMQRLDQVLRELQPVLRTLNTKSNALVFEAKPGQDPQPK 543
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 7/74 (9%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG-------LFLDQEYPNHS 81
S + + ++ S+ GL + V F GI +G + L
Sbjct: 277 SIQDSLYTNHIDYVMFFSDSIRGLQAGAPVEFRGIRLGTVSEAPLMKAGLDQALNNDYRV 336
Query: 82 LAKALIRPDTPLYP 95
I PD +
Sbjct: 337 PVLIRIEPDRFISR 350
>gi|256376292|ref|YP_003099952.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
gi|255920595|gb|ACU36106.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
Length = 329
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V + V L ++V+ +PVGR+ + L ++ + +L + L+
Sbjct: 30 LPGGADVGDRPYRVTVEF-DDVLDLVPQAAVKVADVPVGRVEEIGLSEDG-SVALVRLLV 87
Query: 88 RPDTPLYPSTTATIRTQGLAGITY 111
D L +R L G Y
Sbjct: 88 NGDARLPADARGLLRQSSLLGEKY 111
>gi|315442438|ref|YP_004075317.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260741|gb|ADT97482.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 348
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/253 (12%), Positives = 77/253 (30%), Gaps = 7/253 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D R + L + GIPVG + + L + H +A +R D
Sbjct: 45 DFGYRHYTARFLQAAA-LQPGHPITVAGIPVGEVTSMELAGD---HVVAGLKVRDDVVFG 100
Query: 95 PSTTATIRTQGLAGITY---IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ A+I+ + G Y T T TE + + ++
Sbjct: 101 EDSWASIKVTTILGSRYLALYPEGTGALPDDTFDLSHTEVPYDLQEALSDVTTTFEQVDS 160
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++ ++ + ++ + + + L T I+ ++ +
Sbjct: 161 DQFAETLAVLGKQLETLPPVVPQALENTHTLSTIIAQRRDQLGELLETTDAVSTTLRRQQ 220
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + + + +A + + +Q SN V ++ + D+RE
Sbjct: 221 ATIGSLMDQGNSLLGEFVARRASFHAMMGALTNLVQTLSNIVVDDRPELEKLLTDLRELA 280
Query: 272 QTFQEVGQKIDHL 284
+ + +
Sbjct: 281 TLLGKNDGMVRSI 293
>gi|182434828|ref|YP_001822547.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326775346|ref|ZP_08234611.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
gi|178463344|dbj|BAG17864.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326655679|gb|EGE40525.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
Length = 380
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/311 (9%), Positives = 76/311 (24%), Gaps = 4/311 (1%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ + G+ S +R G+ VG + + E + +
Sbjct: 27 LEEDGKTTVTAYFERATGVYAGSDLRILGVKVGTVASVEPRGE---EVKVVLRLDRGIDV 83
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
A + L Y++L+ + A R + I+
Sbjct: 84 PRDAHAVVVAPSLVADRYVQLAPAYDGGPRLAAGAVLPAARNATPVEVDELYASITELST 143
Query: 154 TS-KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+++ + ++++ K L I +D+ T
Sbjct: 144 ALGPDGANADGALARLLDTGAKNLDGNGKAIGDSIEQFGKATKTLDESSGDLFDTLAHLQ 203
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
S T D + + +N+ + + QV + R +
Sbjct: 204 SFTTMLKENDGDVRSAEQQLNTVTTFLADDKKNLSAALKELGTALGQVKAFIAKNRGALK 263
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
E + L D + + + L + ++ + + +
Sbjct: 264 KNVEALVPVTQALVDQRASLAEAMDTLPLAAGNVLNAYDPANRTLNGRTNLNELSMGGPL 323
Query: 333 NTIENITSNLN 343
++
Sbjct: 324 VDPGAASAAGR 334
>gi|15607732|ref|NP_215106.1| MCE-family protein MCE2D [Mycobacterium tuberculosis H37Rv]
gi|15839995|ref|NP_335032.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|148660362|ref|YP_001281885.1| MCE-family protein Mce2D [Mycobacterium tuberculosis H37Ra]
gi|148821795|ref|YP_001286549.1| MCE-family protein mce2D [Mycobacterium tuberculosis F11]
gi|167969015|ref|ZP_02551292.1| mce-family protein mce2da [Mycobacterium tuberculosis H37Ra]
gi|215402360|ref|ZP_03414541.1| MCE-family protein mce2D [Mycobacterium tuberculosis 02_1987]
gi|215410133|ref|ZP_03418941.1| MCE-family protein mce2D [Mycobacterium tuberculosis 94_M4241A]
gi|215425824|ref|ZP_03423743.1| MCE-family protein mce2D [Mycobacterium tuberculosis T92]
gi|215429425|ref|ZP_03427344.1| MCE-family protein mce2D [Mycobacterium tuberculosis EAS054]
gi|253797527|ref|YP_003030528.1| MCE-family protein mce2D [Mycobacterium tuberculosis KZN 1435]
gi|254549548|ref|ZP_05139995.1| MCE-family protein mce2D [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185469|ref|ZP_05762943.1| MCE-family protein mce2D [Mycobacterium tuberculosis CPHL_A]
gi|260199596|ref|ZP_05767087.1| MCE-family protein mce2D [Mycobacterium tuberculosis T46]
gi|260203756|ref|ZP_05771247.1| MCE-family protein mce2D [Mycobacterium tuberculosis K85]
gi|289441981|ref|ZP_06431725.1| MCE-family protein mce2D [Mycobacterium tuberculosis T46]
gi|289446145|ref|ZP_06435889.1| MCE-family protein mce2D [Mycobacterium tuberculosis CPHL_A]
gi|289552845|ref|ZP_06442055.1| MCE-family protein mce2D [Mycobacterium tuberculosis KZN 605]
gi|289573192|ref|ZP_06453419.1| MCE-family protein mce2D [Mycobacterium tuberculosis K85]
gi|289744306|ref|ZP_06503684.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289749089|ref|ZP_06508467.1| MCE-family protein mce2D [Mycobacterium tuberculosis T92]
gi|289752632|ref|ZP_06512010.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|294996105|ref|ZP_06801796.1| MCE-family protein mce2D [Mycobacterium tuberculosis 210]
gi|297633087|ref|ZP_06950867.1| MCE-family protein mce2D [Mycobacterium tuberculosis KZN 4207]
gi|297730065|ref|ZP_06959183.1| MCE-family protein mce2D [Mycobacterium tuberculosis KZN R506]
gi|298524079|ref|ZP_07011488.1| MCE-family protein mce2D [Mycobacterium tuberculosis 94_M4241A]
gi|306774697|ref|ZP_07413034.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu001]
gi|306781573|ref|ZP_07419910.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu002]
gi|306783235|ref|ZP_07421557.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu003]
gi|306787607|ref|ZP_07425929.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu004]
gi|306794371|ref|ZP_07432673.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu005]
gi|306796341|ref|ZP_07434643.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu006]
gi|306802200|ref|ZP_07438868.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu008]
gi|306806408|ref|ZP_07443076.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu007]
gi|306966608|ref|ZP_07479269.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu009]
gi|306970801|ref|ZP_07483462.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu010]
gi|307078524|ref|ZP_07487694.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu011]
gi|307083088|ref|ZP_07492201.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu012]
gi|313657392|ref|ZP_07814272.1| MCE-family protein mce2D [Mycobacterium tuberculosis KZN V2475]
gi|2222766|emb|CAB09960.1| MCE-FAMILY PROTEIN MCE2D [Mycobacterium tuberculosis H37Rv]
gi|13880138|gb|AAK44846.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|148504514|gb|ABQ72323.1| MCE-family protein Mce2D [Mycobacterium tuberculosis H37Ra]
gi|148720322|gb|ABR04947.1| MCE-family protein mce2D [Mycobacterium tuberculosis F11]
gi|253319030|gb|ACT23633.1| MCE-family protein mce2D [Mycobacterium tuberculosis KZN 1435]
gi|289414900|gb|EFD12140.1| MCE-family protein mce2D [Mycobacterium tuberculosis T46]
gi|289419103|gb|EFD16304.1| MCE-family protein mce2D [Mycobacterium tuberculosis CPHL_A]
gi|289437477|gb|EFD19970.1| MCE-family protein mce2D [Mycobacterium tuberculosis KZN 605]
gi|289537623|gb|EFD42201.1| MCE-family protein mce2D [Mycobacterium tuberculosis K85]
gi|289684834|gb|EFD52322.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289689676|gb|EFD57105.1| MCE-family protein mce2D [Mycobacterium tuberculosis T92]
gi|289693219|gb|EFD60648.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|298493873|gb|EFI29167.1| MCE-family protein mce2D [Mycobacterium tuberculosis 94_M4241A]
gi|308216595|gb|EFO75994.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu001]
gi|308325668|gb|EFP14519.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu002]
gi|308331901|gb|EFP20752.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu003]
gi|308335688|gb|EFP24539.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu004]
gi|308337267|gb|EFP26118.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu005]
gi|308343192|gb|EFP32043.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu006]
gi|308347060|gb|EFP35911.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu007]
gi|308351003|gb|EFP39854.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu008]
gi|308355636|gb|EFP44487.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu009]
gi|308359591|gb|EFP48442.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu010]
gi|308363519|gb|EFP52370.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu011]
gi|308367202|gb|EFP56053.1| MCE-family protein mce2D [Mycobacterium tuberculosis SUMu012]
gi|323720945|gb|EGB30010.1| MCE-family protein mce2D [Mycobacterium tuberculosis CDC1551A]
gi|326902424|gb|EGE49357.1| MCE-family protein mce2D [Mycobacterium tuberculosis W-148]
gi|328457310|gb|AEB02733.1| MCE-family protein mce2D [Mycobacterium tuberculosis KZN 4207]
Length = 508
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 28/292 (9%), Positives = 79/292 (27%), Gaps = 8/292 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
Y ++ L V+ G+ VG I + +
Sbjct: 39 RLYRKLTTTTVVAYFSEALALYPGDKVQIMGVRVGSIDKIEPAGD---KMRVTLHYSNKY 95
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + TA+I L I+LS + A +R + P + +
Sbjct: 96 QVPATATASILNPSLVASRTIQLSPPYTGGPVLQDGAVIPIERTQV---PVEWDQLRDSI 152
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+++ + R + ++ + +A N++S ++ + +
Sbjct: 153 NGILRQLGPTERQPKGPFGDLIESAADNLAGKGRQLNETLNSLSQALTALNEGRGDFVAI 212
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ +L + + V+ D V+ TV +
Sbjct: 213 TRSLALFVSALYQNDQQFVALNENLAEFTDWFTKSDHDLADTVERIDDVLGTVRKF--VS 270
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
+ +++L ++ ++ + + + + + +
Sbjct: 271 DNRSVLAADVNNLADATTTLVQPEPRDGLETALHVLPTYASNFNNLYYPLHS 322
>gi|319762169|ref|YP_004126106.1| mammalian cell entry related domain protein [Alicycliphilus
denitrificans BC]
gi|330826018|ref|YP_004389321.1| mammalian cell entry related domain-containing protein
[Alicycliphilus denitrificans K601]
gi|317116730|gb|ADU99218.1| Mammalian cell entry related domain protein [Alicycliphilus
denitrificans BC]
gi|329311390|gb|AEB85805.1| mammalian cell entry related domain protein [Alicycliphilus
denitrificans K601]
Length = 327
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/271 (12%), Positives = 86/271 (31%), Gaps = 4/271 (1%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
S+ +L + P +++ S +G+S + F+G P+GR+ + L +
Sbjct: 35 IVGSVLYLLYARGAFEPTQPLVLTTDDS-EGVSVGMDMTFSGFPIGRVRRIELAGDGNVR 93
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
L R L S+ T+ +GL G T I+ + + A R TA
Sbjct: 94 ILVDVAQRDAHWLRESSVFTLV-RGLVGGTAIKAYSGVLTDPPLAAGAERPVLRGDATAE 152
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+ + ++++ + + + + A + ++ N +
Sbjct: 153 IPQLMATARQLLDNLQQLTAQESALGATLAQVRQLSERMNAPGGALGVLMGNEADA--RK 210
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ T + ++ + ++ + + + +S +V
Sbjct: 211 VLQTLERTNQLLARIDAMAARADRQVFGAAGAPGLVPELRAAVVQMNGLLQDARQSLLRV 270
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + +E + L + +
Sbjct: 271 DAVLAEAQAVGANAREATTDLGALRAQVEAS 301
>gi|292899089|ref|YP_003538458.1| paraquat-inducible protein B [Erwinia amylovora ATCC 49946]
gi|291198937|emb|CBJ46047.1| paraquat-inducible protein B [Erwinia amylovora ATCC 49946]
Length = 536
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 33/404 (8%), Positives = 88/404 (21%), Gaps = 25/404 (6%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L V F G VG + D + + + P T +R
Sbjct: 155 SEKAGQLKAGDPVLFRGYRVGSVETSAFDADKR---MMTYQLFIAAPYDRLVTTNVRFWK 211
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+GI ++ + + I + AE S +
Sbjct: 212 DSGIAVDMSASGMRVEMGSLTTLFSGGVSFDIPDGWESGTSAENKAEYRLFNDQRSIQDS 271
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ + + ++ T I +
Sbjct: 272 LYSVHKDFLLF----------FNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIAQRLN 321
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ I ++ + + ++ + +D
Sbjct: 322 NDFRIPVLIRIEPDRFKTQLGTDFNFEQHLKDGVAAGLRASLKSANLLTGALYIDLDFYN 381
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + A + +N +
Sbjct: 382 NAKPVSSPATFAQYSVIPTASGGLAQIQQKLMESLDKINHLPLNPLLNEAAGTLKESQRT 441
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ + + +N +++ + L D Q + + +
Sbjct: 442 LKELQKTLDNLNQLTSSQSMKELPADMQSTLRELNRSMKGFQP------------GSPAY 489
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
N + +++L + + L +V+ E G K
Sbjct: 490 NKMVGDMQRLDQVLRELQPVLKTLNNKSNALVFEAEPGRDPQPK 533
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-------QEYPNHSLAKALIRPD 90
++ SV GL + V F GI +G + + I PD
Sbjct: 279 FLLFFNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIAQRLNNDFRIPVLIRIEPD 335
>gi|311743971|ref|ZP_07717777.1| MCE family protein [Aeromicrobium marinum DSM 15272]
gi|311313101|gb|EFQ83012.1| MCE family protein [Aeromicrobium marinum DSM 15272]
Length = 377
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/296 (9%), Positives = 93/296 (31%), Gaps = 6/296 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
VG+ +V+ + + L N G + P +++ L+ + V+ G+PVGR
Sbjct: 10 ALVGVALVAAGCGTTAADLPLPG-NSVRGDTYSITATFPDALN-LALGAPVKLGGVPVGR 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L + ++ I D + +R G ++++ + +
Sbjct: 68 VSELAVQ---DYTAIVTLDIESDIEVAADADIRLRATTALGELFVDIVQEPGATEVLDDG 124
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
AT ++ + ++ + +++ + T + + ++
Sbjct: 125 ATVDPANSLAAPS-IEDTLSAASLFINGGGLGQLQTIVEETNAILGGREDTARSVVRRMA 183
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
A+ + ++ + + + A+ + +Q++ +
Sbjct: 184 GTAADLNDASADIDVALAAISAAAAALDARQATINQSLVEISPAAAVLRENTDQLVALLT 243
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + + + D+ + + ++ + + + + L +
Sbjct: 244 GVDDLGDTAVQVITESRSDLLQVLAQTAPIFDQVSAVSDEIAPGVADILGFVGLMD 299
>gi|159482516|ref|XP_001699315.1| permease-like component of an ABC transporter [Chlamydomonas
reinhardtii]
gi|158272951|gb|EDO98745.1| permease-like component of an ABC transporter [Chlamydomonas
reinhardtii]
Length = 278
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLFV++ + + W + G + I P G+ + VR G+ V +
Sbjct: 45 VGLFVLAGGGAAVALVAWARGNALRTGTPYQATIEFPL-ACGIQIGTPVRIRGVQVNDVS 103
Query: 70 GL 71
+
Sbjct: 104 TV 105
>gi|296165585|ref|ZP_06848110.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899058|gb|EFG78539.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 317
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 27/291 (9%), Positives = 79/291 (27%), Gaps = 16/291 (5%)
Query: 12 LFVVSILFFSFFSIYW-LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
+ ++ S+ W + + +P + GL S+V G PVG++
Sbjct: 9 FAMFGVIIAFAVSVIWSFGVRTGPPAQRTNLSMAVPD-IKGLVVGSNVLLRGQPVGKVTE 67
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ + + + + + + T + G YI L+
Sbjct: 68 IN---TATSDATVQFYVDGNHHIPIDTDVRLDNLSALGEAYIGLAPRTSGGPVYKDGQRI 124
Query: 131 RNQRAMITATPS---------GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + S + + + ++++ N+ + +
Sbjct: 125 SPKSIEAPPSISELATSVVRVLNQLDPGQLKRILGEADAALPAPEQVLPNLAHASSLLRS 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
++ I + ++ + + I + +
Sbjct: 185 QAASMHGRGQEVIDNFQALLRNAGWVGPL--LGDLISPIRAAGFGAAGTYQGMMHTLEWN 242
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
++ + + + + D++ T+T + I L +F S
Sbjct: 243 NPRDMALFGDYLDRIQAFLDTRAPDLKVLTETLLPHFKGIGGALMNFDSGQ 293
>gi|284043086|ref|YP_003393426.1| hypothetical protein Cwoe_1623 [Conexibacter woesei DSM 14684]
gi|283947307|gb|ADB50051.1| Mammalian cell entry related domain protein [Conexibacter woesei
DSM 14684]
Length = 493
Score = 60.7 bits (144), Expect = 4e-07, Method: Composition-based stats.
Identities = 30/359 (8%), Positives = 90/359 (25%), Gaps = 8/359 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ + ++ + ++ D +V + L + V+ +G+ +G I L
Sbjct: 4 ILAIGLIVVAALAVVVFGTGAASDDSSYKVRAIF-DNAGFLVSGEDVKASGVVIGSIDSL 62
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA--- 128
+ + + +R Q L G Y+ + +
Sbjct: 63 EVTPDKKAAVILNITDPAFKNFKQDARCAVRLQSLLGEKYVSCIPTQPKNPGDRPSPPLR 122
Query: 129 -TERNQRAMITATPSGINYFISNAENTSKKIS-DSSRHIQKIIENIEKPLTTTIANIETI 186
E P + + + + + I+ L + + +
Sbjct: 123 KIEDGAGEGQYLLPVSHTSSPVDLDMLNNVMRLPERQRFSLILNEFGTGLAGSGDELRAV 182
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ DK++ + + + + + K + E
Sbjct: 183 IRRANPALDEFDKVLRILADQNRVLAKLAEDGDVAVGPLAREADAISNFIDKAGKTAEAT 242
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE--TSAFLENI 304
++ ++ + + T + + + +D + S
Sbjct: 243 AERGDDLERNFALFPEFLRQLNPTMAQLENFSKSATPVFTDLRAAAPSINKIFEQLGPFS 302
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ +R+ A I I+ + ++ A +S + +
Sbjct: 303 RAALPTLRTFGDAAEISRRALIAARPVIQDIDQLARATGPLARNLAVGLSDLERQRGID 361
>gi|54023085|ref|YP_117327.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014593|dbj|BAD55963.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 367
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/307 (10%), Positives = 79/307 (25%), Gaps = 5/307 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+P S+ GL + V GI VG + + + + D P+Y
Sbjct: 36 RRTESYCAIMPDSI-GLYEGNQVTMRGIVVGSVTSVR---NQGSGVRVDFEVDADHPVYA 91
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+AT + + + + + A + T + + E
Sbjct: 92 DASATTVSDTVVADRELAVLASGATTEPWDSGACITRTLTPKSLTETLTALAQLSDELVG 151
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + + T E I + + S + H + S
Sbjct: 152 ADPAQQNSLAAGLASLDRATADTGPQINELIRRLGSALKSPDADIAHLAGIFDAFSSVSK 211
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV-RETTQTF 274
N + ++ + + Q + +L + + + + E
Sbjct: 212 KVNQYWGDLETMLVRVGPVLDQATDDLLVPGAQLFDALREVLPMLDDLTSLFGTEILGLL 271
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ L ++ S T+ L + + ++ + S + +
Sbjct: 272 DRTVPLLKLLRANVGSLRDIVLTTPVLASAFRTAADPETGASGLTYAPPRVALPQPAAEQ 331
Query: 335 IENITSN 341
+
Sbjct: 332 VCAAVEA 338
>gi|283832769|ref|ZP_06352510.1| PqiB protein [Citrobacter youngae ATCC 29220]
gi|291072454|gb|EFE10563.1| PqiB protein [Citrobacter youngae ATCC 29220]
Length = 877
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 49/145 (33%), Gaps = 14/145 (9%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W Y+ V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----GSYEDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ--GLAGITYIELST 116
G+ VG + + L ++ + I+ + L T + T LAG++ ++
Sbjct: 69 QGVEVGTVQDINLSKD-LRKIEVRVSIKSNMKDALRKDTQFWLVTPKASLAGVSGLDALV 127
Query: 117 LRKEKKTIFQIATERNQRAMITATP 141
+ + + P
Sbjct: 128 GGNYIGMMPGTGEPEDHFVALDTQP 152
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + GL L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGLTL-GSLSDRVMVAMRISQRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|215444705|ref|ZP_03431457.1| MCE-family protein mce2D [Mycobacterium tuberculosis T85]
gi|289756671|ref|ZP_06516049.1| MCE-family protein mce2D [Mycobacterium tuberculosis T85]
gi|289712235|gb|EFD76247.1| MCE-family protein mce2D [Mycobacterium tuberculosis T85]
Length = 508
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/292 (9%), Positives = 79/292 (27%), Gaps = 8/292 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
Y ++ L V+ G+ VG I + +
Sbjct: 39 RLYRKLTTTTVVAYFSEALALYPGDKVQIMGVRVGSIDKIEPAGD---KMRVTLHYSNKY 95
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + TA+I L I+LS + A +R + P + +
Sbjct: 96 QVPATATASILNPSLVASRTIQLSPPYTGGPVLQDGAVIPIERTQV---PVEWDQLRDSI 152
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+++ + R + ++ + +A N++S ++ + +
Sbjct: 153 NGILRQLGPTERQPKGPFGDLIESAADNLAGKGRQLNETLNSLSQALTALNEGRGDFVAI 212
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ +L + + V+ D V+ TV +
Sbjct: 213 TRSLALFVSALYQNDQQFVALNENLAEFTDWFTKSDHDLADTVERIDDVLGTVRKF--VS 270
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
+ +++L ++ ++ + + + + + +
Sbjct: 271 DNRSVLAADVNNLADATTTLVQPEPRDGLETALHVLPTYASNFSNLYYPLHS 322
>gi|300115316|ref|YP_003761891.1| mammalian cell entry related domain-containing protein
[Nitrosococcus watsonii C-113]
gi|299541253|gb|ADJ29570.1| Mammalian cell entry related domain protein [Nitrosococcus watsonii
C-113]
Length = 550
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/394 (7%), Positives = 96/394 (24%), Gaps = 24/394 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ + + G VGRI + + H D + +T GI
Sbjct: 172 LTIGDPIVYQGQEVGRIDSAEFNAQTLEMHYGVLIRAPFDKLITQNTQFW----PRFGIA 227
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ S + + + G A+ ++ + +
Sbjct: 228 FEITSEGVRVQTGTLEAMLAGGVTFGAPPKLKGGKKVQQGAKFRLYPSRQIAQQDRYDHQ 287
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
L + + +++ + I LI +
Sbjct: 288 YKYVILFDDSVRGLYPGATVEFRGVRVGTVLNVPFFGGGFGMEYSKTFRIPVLIAFEPQR 347
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ +++Q Q+ + + ++ +
Sbjct: 348 LTGTTWAQLDQKAWQQQL--SRLFPRGLRATIKTANLFTGAMFVDLAFTDQKSAHDEAGF 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + +A+ + ++ + ++ + ++ K
Sbjct: 406 QGQYPLLPSHSSGLANI-----EEKATRLLGKLDALELAPVLTKLQRALESTSEVMNKSQ 460
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
M+++N+I + L + + R T + + +
Sbjct: 461 ITMARLNSILGGEAMRELPAEFNATLDELRKTLHSYQQ------------GAPVYDKLNR 508
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ +L + ++ + P + +G
Sbjct: 509 SLGRLNQVLDDLAPFVETLHDAPSALFFGGNAPE 542
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/263 (6%), Positives = 71/263 (26%), Gaps = 17/263 (6%)
Query: 39 AEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT 98
+ +I SV GL ++V F G+ VG ++ + +
Sbjct: 288 YKYVILFDDSVRGLYPGATVEFRGVRVGTVLNVPFFGGGFG-----MEYSKTFRIP---- 338
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
I + + Q A ++ + +
Sbjct: 339 --------VLIAFEPQRLTGTTWAQLDQKAWQQQLSRLFPRGLRATIKTANLFTGAMFVD 390
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ E + + + + + + + + ++ P + +
Sbjct: 391 LAFTDQKSAHDEAGFQGQYPLLPSHSSGLANIEEKATRLLGKLDALELAPVLTKLQRALE 450
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ ++++ + ++ + + + N + + +++
Sbjct: 451 STSEVMNKSQITMARLNSILGGEAMRELPAEFNATLDELRKTLHSYQQGAPVYDKLNRSL 510
Query: 279 QKIDHLLSDFSSKMKSKETSAFL 301
+++ +L D + +++ +
Sbjct: 511 GRLNQVLDDLAPFVETLHDAPSA 533
Score = 43.4 bits (99), Expect = 0.083, Method: Composition-based stats.
Identities = 37/456 (8%), Positives = 100/456 (21%), Gaps = 32/456 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + L E+++R+ + +G+ + V+ + + VG + + L
Sbjct: 23 LVPLVAALIGAWLL--YRNIASQGPEIVLRL-DNAEGVEAGKTVVKLHNVDVGLVEKVRL 79
Query: 74 DQEYPNHS-LAKALIRPDTPLYPSTTATI-----------RTQGLAGITYIELSTLRKEK 121
++Y + D L T + + YI++ +
Sbjct: 80 SKDYTGAVAEIRMKADMDPLLVKDTQFWVVKPRVGREGISGLNTILSGAYIQMRPGNDQS 139
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
A ++ + T IS + + Q++
Sbjct: 140 SARHFKALDQ-PPTIRTGAAGLSLELISTGDISLTIGDPIVYQGQEVGRIDSAEFNAQTL 198
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + A I + + + + +
Sbjct: 199 EMHYGVLIRAPFDKLITQNTQFWPRFGIAFEITSEGVRVQTGTLEAMLAGGVTFGAPPKL 258
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
F + I + + L + + + L
Sbjct: 259 KGGKKVQQGAKFRLYPSRQIAQQDRYDHQYKYVILFDDSVRGLYPGATVEFRGVRVGTVL 318
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
R + T Q +
Sbjct: 319 NVPFFGGGFGMEYSKTFRIPVLIAFEPQRLTGTTWAQLDQKAWQQQLSRLFPRGLRATIK 378
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKI------------NRYIPSIGNNLQNFSQSGLN-DI 408
+ A + ++ + + +I ++
Sbjct: 379 TANLFTGAMFVDLAFTDQKSAHDEAGFQGQYPLLPSHSSGLANIEEKATRLLGKLDALEL 438
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDI--VWGREK 442
++ KLQ + + +N + + + G E
Sbjct: 439 APVLTKLQRALESTSEVMNKSQITMARLNSILGGEA 474
>gi|296313493|ref|ZP_06863434.1| paraquat-inducible protein B [Neisseria polysaccharea ATCC 43768]
gi|296840014|gb|EFH23952.1| paraquat-inducible protein B [Neisseria polysaccharea ATCC 43768]
Length = 553
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 85/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + + + +
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKLADLLDKFNSLPLDKTVSGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLTELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRITLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/388 (8%), Positives = 99/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPVLLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTVG---SPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T++ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQAKLADLLDKFNSLPLDKTVSGLNGSLTELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRITLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 45/461 (9%), Positives = 123/461 (26%), Gaps = 37/461 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
KN +++V ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTFLSAVWLVPLIALIAGGWLWIKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPVLL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTATISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKLA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + + +L+ T+ + L++ ++
Sbjct: 432 DLLDKFNSLPLDKTVSGLNGSLTELKSTLKSANAALSSIDK 472
>gi|300784335|ref|YP_003764626.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793849|gb|ADJ44224.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 444
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/131 (17%), Positives = 44/131 (33%), Gaps = 3/131 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ Y +GL + L + F L+ ++ P+ V + L T V+ G+
Sbjct: 8 RLRYQVLGLVFL--LVAALFITLTLAVYHKAFTPVTLVKLETDRVGSQLRTGGDVKVRGM 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + + L + + + +A + + L G Y+ L K +
Sbjct: 66 LVGEVRSV-LAKGDHAELELALDPDKTPVIPKNVSARLLPKTLFGERYVALQLPGKPEAP 124
Query: 124 IFQIATERNQR 134
I R
Sbjct: 125 IQAGDVIPQDR 135
>gi|237731872|ref|ZP_04562353.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226907411|gb|EEH93329.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 891
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W Y+ V I S DG+ + VR+
Sbjct: 31 KRRISPFWLLPFIALMIA---GWLIW----GSYEDRGNTVTIDF-MSADGIVPGRTPVRY 82
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L ++ + I+ L T + T
Sbjct: 83 QGVEVGTVQDINLSKD-LRKIEVRVSIKSSMKDALRKDTQFWLVTP 127
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + GL L + + I + ++ + +
Sbjct: 771 AGSLNIGTPVLFRGIEVGTVTGLTL-GSLSDRVMVAMRISQRYQHLVRNNSVFWLASGYN 829
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + K
Sbjct: 830 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLLESEPKEWRE 884
>gi|331676741|ref|ZP_08377437.1| paraquat-inducible protein B [Escherichia coli H591]
gi|331075430|gb|EGI46728.1| paraquat-inducible protein B [Escherichia coli H591]
Length = 527
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 148 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 186
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 187 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 246
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 247 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 306
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 307 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 366
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 367 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 426
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 427 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 474
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 475 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 523
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 248 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 307
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 308 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 365
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 366 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 425
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 426 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 480
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 481 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 510
>gi|312171985|emb|CBX80242.1| Paraquat-inducible protein B [Erwinia amylovora ATCC BAA-2158]
Length = 552
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 34/404 (8%), Positives = 88/404 (21%), Gaps = 25/404 (6%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L V F G VG + D + + + P T +R
Sbjct: 171 SEKAGQLKAGDPVLFRGYRVGSVETSAFDADKR---MMTYQLFIAAPYDRLVTTNVRFWK 227
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+GI ++ + + I + AE S +
Sbjct: 228 DSGIAVDMSASGMRVEMGSLTTLFSGGVSFDIPDGWESGTSAENKAEYRLFNDQRSIQDS 287
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ + + ++ T I +
Sbjct: 288 LYSVHKDFLLF----------FNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIAQRLN 337
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ I ++ + + ++ + +D
Sbjct: 338 NDFRIPVLIRIEPDRFKTQLGTDFNFEQHLKDGVAAGLRASLKSANLLTGALYIDLDFYN 397
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + A + +N +
Sbjct: 398 NAKPVSSPATFAQYSVIPTASGGLAQIQQKLMESLDKINHLPLNPLLNEAAGTLKESQRT 457
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ + + IN +++ + L D Q + + +
Sbjct: 458 LKELQKTLDNINQLTSSQSMKELPADMQSTLRELNRSMKGFQP------------GSPAY 505
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
N + +++L + + L +V+ E G K
Sbjct: 506 NKMVGDMQRLDQVLRELQPVLKTLNNKSNALVFEAEPGRDPQPK 549
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-------QEYPNHSLAKALIRPD 90
++ SV GL + V F GI +G + + I PD
Sbjct: 295 FLLFFNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIAQRLNNDFRIPVLIRIEPD 351
>gi|323185338|gb|EFZ70702.1| paraquat-inducible protein B [Escherichia coli 1357]
Length = 528
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 149 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 187
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 188 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 247
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 248 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 307
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 308 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 367
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 368 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 427
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 428 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 475
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 476 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 524
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 249 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 308
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 309 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 366
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 367 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 426
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 427 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 481
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 482 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 511
>gi|304397106|ref|ZP_07378985.1| Mammalian cell entry related domain protein [Pantoea sp. aB]
gi|304355255|gb|EFM19623.1| Mammalian cell entry related domain protein [Pantoea sp. aB]
Length = 547
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/409 (9%), Positives = 97/409 (23%), Gaps = 41/409 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D + + Q
Sbjct: 168 AGQLNPGDPVLFRGYRVGTVETSVFDTDKR---------------------MMTYQLFVA 206
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + + M S F + Q
Sbjct: 207 APYDRLVTTNVRFWKDSGIAVDMSASGMRVEMGSLTTLFSGGVSFDVPDGWELGEPAQNK 266
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + + + L+ +
Sbjct: 267 SDYHLFDDQRSIQDSLYTNHIDYLMFFTDSIRGLQAGAPVEFRGIRLGTVSEAPLMKAGL 326
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL---- 284
D + I + ++ D + + + + G +
Sbjct: 327 DQALNNDYRVPVLIRIEPDRFISRLGENFDLEQHLQDGKKRGLRATLKTGNLLSGALYVD 386
Query: 285 --LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ--KIISTINTIENITS 340
D + K + + E I + + + D+ + +N
Sbjct: 387 LDFYDNAPAYKGPQKVSGYEVIPTVSGGLSQIQQKLMAALDKINSLPLNGMVNEATGTLK 446
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + IN ++ +L +D Q+ + + + + P+ + +
Sbjct: 447 ESQKTMRDLQRTIDNINKVTGSPAMKTLPEDLQQTLRELNRSMKGLQPGSPAYTKVVGD- 505
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+++L + + L +V+ + G K
Sbjct: 506 -----------MQRLDQVLRELQPVLRTLNNKSNALVFEAKPGQDPQPK 543
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 13/74 (17%), Positives = 22/74 (29%), Gaps = 7/74 (9%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG-------LFLDQEYPNHS 81
S + + ++ S+ GL + V F GI +G + L
Sbjct: 277 SIQDSLYTNHIDYLMFFTDSIRGLQAGAPVEFRGIRLGTVSEAPLMKAGLDQALNNDYRV 336
Query: 82 LAKALIRPDTPLYP 95
I PD +
Sbjct: 337 PVLIRIEPDRFISR 350
>gi|331641481|ref|ZP_08342616.1| paraquat-inducible protein B [Escherichia coli H736]
gi|331038279|gb|EGI10499.1| paraquat-inducible protein B [Escherichia coli H736]
Length = 733
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 38/419 (9%), Positives = 112/419 (26%), Gaps = 26/419 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + ++
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMV-- 502
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ +RE + + +K + L+ + K +S+ T
Sbjct: 503 ------ADMQRLDQVLRELQPVLKTLNEKSNALVFEAKDKKRSRAEEGETMKKWLVTIAA 556
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
++ + + + T++ + ++ + + A D
Sbjct: 557 LWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQV--TVPDYLAGNGVVYQTSD 614
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ + + +++ + N L + L + L + + + F
Sbjct: 615 VKYVIANNNLWASPLDQ---QLRNTLVANLSTQLPGWVVASQPLGSAQDTLNVTVTEFN 670
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/389 (10%), Positives = 94/389 (24%), Gaps = 34/389 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + + + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSAAYNKMVAD- 504
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
+ + ++R+LQ + ++ N
Sbjct: 505 ----MQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|126436258|ref|YP_001071949.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236058|gb|ABN99458.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 494
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/259 (11%), Positives = 68/259 (26%), Gaps = 7/259 (2%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ P + VR +G+ VG+I + + + D P+ A
Sbjct: 37 TITAYFPT-ATAIYPGDEVRVSGVKVGKIEAITPEGTET---KMLLSVDRDVPVPADAKA 92
Query: 100 TIRTQGLAGITY---IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
I Q L + K ++ A+ A
Sbjct: 93 VIVAQNLVAERFVALTPAYRTGDGPKMPDGGVIPSDRTAVPVEWDEVKEQLTRLATALGP 152
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ S + + I++ L + L+ + + T
Sbjct: 153 EAGVSDTSVSRFIDSAADALDGNGEKLRDTLAQLSGVARVFAEGSGNIVDIIKNLQIFVT 212
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + A VN ++ + + + +V V R+ T +
Sbjct: 213 ALRDSKQQIVQFENRLATLTSVVNDSRSDLDAALSELSVALGEVQRFVAGTRDLTAEQIQ 272
Query: 277 VGQKIDHLLSDFSSKMKSK 295
+ +L D + +++
Sbjct: 273 RLANVTQVLVDNRTALENV 291
>gi|324997542|ref|ZP_08118654.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 446
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 31/321 (9%), Positives = 93/321 (28%), Gaps = 13/321 (4%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQ 104
L + +R+ G+ VG + + + + + P PL+ + ATIR
Sbjct: 31 FADASPLLVGNDIRYAGVKVGEVESMTVV---DGAAEVVMELEPSVLPLHTDSRATIRPV 87
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
L G +++L E + +R + + ++ + + +
Sbjct: 88 TLLGERFLDLDRGSPEAPVMDPSDGIPLERTGQATDL---DQVLDVVDDPTGEALGAMVG 144
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ + + ++ I + + ++ + +
Sbjct: 145 VLGGGLEGNGRNVDDAIRALRPAMTQTDQLAGILR-----DQNQTLNSLVDSLEPVASSL 199
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ D + +L + + + ++ T+ R T ++
Sbjct: 200 ATEDGKALDRLVNSAQGLLATTNANDRDLRGTVQELPGTMASARRTLGELAGTAREARPT 259
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
L + + I + S + S + + + + + + D
Sbjct: 260 LEQLRPTTDNLPEISREL-IRFADSADPALASLQPVLDEADELLAAARPVATGLREQGGD 318
Query: 345 SSQKFAELMSKINNISALKEN 365
+ + L + +++A + N
Sbjct: 319 TVRAVNGLEPAVRDLTANRNN 339
>gi|82544725|ref|YP_408672.1| paraquat-inducible protein B [Shigella boydii Sb227]
gi|81246136|gb|ABB66844.1| paraquat-inducible protein B [Shigella boydii Sb227]
gi|320176235|gb|EFW51296.1| Paraquat-inducible protein B [Shigella dysenteriae CDC 74-1112]
gi|320187162|gb|EFW61863.1| Paraquat-inducible protein B [Shigella flexneri CDC 796-83]
Length = 546
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENTDVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/272 (10%), Positives = 74/272 (27%), Gaps = 22/272 (8%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD---TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
I P+ L +T G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENTDVV----EHLGELLKRGLRGSLKTGNLVTGAL 382
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + + ++ Q+++E ++K + + +T
Sbjct: 383 YVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATS 442
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ K + TT + + + + + + S + + +
Sbjct: 443 TLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----A 497
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
N V ++ + +++ +T E +
Sbjct: 498 YNKMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|149276255|ref|ZP_01882399.1| ABC transporter-related permease with MCE domain [Pedobacter sp.
BAL39]
gi|149232775|gb|EDM38150.1| ABC transporter-related permease with MCE domain [Pedobacter sp.
BAL39]
Length = 306
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 33/105 (31%), Gaps = 4/105 (3%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY 77
+ +L + + VDGL V NG +GR+ L L +
Sbjct: 6 IALLIIGYNFLKGNAIFSSETVLYAKY--SHVDGLGVSKPVLINGYQIGRVDLLTLQPDG 63
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+A I+ + ++ A + + L G I +
Sbjct: 64 S--IIATLKIKGKYEIPKNSIAKLESIDLLGGKAIVMQLGTGNIY 106
>gi|16128918|ref|NP_415471.1| paraquat-inducible protein B [Escherichia coli str. K-12 substr.
MG1655]
gi|89107801|ref|AP_001581.1| paraquat-inducible protein B [Escherichia coli str. K-12 substr.
W3110]
gi|157155915|ref|YP_001462184.1| paraquat-inducible protein B [Escherichia coli E24377A]
gi|157160472|ref|YP_001457790.1| paraquat-inducible protein B [Escherichia coli HS]
gi|170020648|ref|YP_001725602.1| paraquat-inducible protein B [Escherichia coli ATCC 8739]
gi|170080609|ref|YP_001729929.1| paraquat-inducible protein B [Escherichia coli str. K-12 substr.
DH10B]
gi|193064651|ref|ZP_03045730.1| paraquat-inducible protein B [Escherichia coli E22]
gi|209918203|ref|YP_002292287.1| paraquat-inducible protein B [Escherichia coli SE11]
gi|218553538|ref|YP_002386451.1| paraquat-inducible protein B [Escherichia coli IAI1]
gi|218694426|ref|YP_002402093.1| paraquat-inducible protein B [Escherichia coli 55989]
gi|238900209|ref|YP_002926005.1| paraquat-inducible protein B [Escherichia coli BW2952]
gi|253774020|ref|YP_003036851.1| paraquat-inducible protein B [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254161065|ref|YP_003044173.1| paraquat-inducible protein B [Escherichia coli B str. REL606]
gi|256018790|ref|ZP_05432655.1| paraquat-inducible protein B [Shigella sp. D9]
gi|256023347|ref|ZP_05437212.1| paraquat-inducible protein B [Escherichia sp. 4_1_40B]
gi|260843200|ref|YP_003220978.1| paraquat-inducible protein B [Escherichia coli O103:H2 str. 12009]
gi|260854243|ref|YP_003228134.1| paraquat-inducible protein B [Escherichia coli O26:H11 str. 11368]
gi|260867123|ref|YP_003233525.1| paraquat-inducible protein B [Escherichia coli O111:H- str. 11128]
gi|297520186|ref|ZP_06938572.1| paraquat-inducible protein B [Escherichia coli OP50]
gi|301022473|ref|ZP_07186352.1| putative paraquat-inducible protein B [Escherichia coli MS 196-1]
gi|307311662|ref|ZP_07591302.1| Mammalian cell entry related domain protein [Escherichia coli W]
gi|312971084|ref|ZP_07785263.1| paraquat-inducible protein B [Escherichia coli 1827-70]
gi|331667333|ref|ZP_08368198.1| paraquat-inducible protein B [Escherichia coli TA271]
gi|2507104|sp|P43671|PQIB_ECOLI RecName: Full=Paraquat-inducible protein B
gi|1651463|dbj|BAA35709.1| paraquat-inducible protein B [Escherichia coli str. K12 substr.
W3110]
gi|1787184|gb|AAC74037.1| paraquat-inducible protein B [Escherichia coli str. K-12 substr.
MG1655]
gi|157066152|gb|ABV05407.1| paraquat-inducible protein B [Escherichia coli HS]
gi|157077945|gb|ABV17653.1| paraquat-inducible protein B [Escherichia coli E24377A]
gi|169755576|gb|ACA78275.1| Mammalian cell entry related domain protein [Escherichia coli ATCC
8739]
gi|169888444|gb|ACB02151.1| paraquat-inducible protein B [Escherichia coli str. K-12 substr.
DH10B]
gi|192927708|gb|EDV82323.1| paraquat-inducible protein B [Escherichia coli E22]
gi|209911462|dbj|BAG76536.1| paraquat-inducible protein B [Escherichia coli SE11]
gi|218351158|emb|CAU96862.1| paraquat-inducible protein B [Escherichia coli 55989]
gi|218360306|emb|CAQ97856.1| paraquat-inducible protein B [Escherichia coli IAI1]
gi|238861979|gb|ACR63977.1| paraquat-inducible protein B [Escherichia coli BW2952]
gi|242376766|emb|CAQ31479.1| paraquat-inducible protein B [Escherichia coli BL21(DE3)]
gi|253325064|gb|ACT29666.1| Mammalian cell entry related domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253972966|gb|ACT38637.1| paraquat-inducible protein B [Escherichia coli B str. REL606]
gi|253977180|gb|ACT42850.1| paraquat-inducible protein B [Escherichia coli BL21(DE3)]
gi|257752892|dbj|BAI24394.1| paraquat-inducible protein B [Escherichia coli O26:H11 str. 11368]
gi|257758347|dbj|BAI29844.1| paraquat-inducible protein B [Escherichia coli O103:H2 str. 12009]
gi|257763479|dbj|BAI34974.1| paraquat-inducible protein B [Escherichia coli O111:H- str. 11128]
gi|260449903|gb|ACX40325.1| Mammalian cell entry related domain protein [Escherichia coli DH1]
gi|299881236|gb|EFI89447.1| putative paraquat-inducible protein B [Escherichia coli MS 196-1]
gi|306908217|gb|EFN38716.1| Mammalian cell entry related domain protein [Escherichia coli W]
gi|309701230|emb|CBJ00530.1| paraquat-inducible protein B [Escherichia coli ETEC H10407]
gi|310336845|gb|EFQ02012.1| paraquat-inducible protein B [Escherichia coli 1827-70]
gi|315060236|gb|ADT74563.1| paraquat-inducible protein B [Escherichia coli W]
gi|315135599|dbj|BAJ42758.1| paraquat-inducible protein B [Escherichia coli DH1]
gi|315619148|gb|EFU99728.1| paraquat-inducible protein B [Escherichia coli 3431]
gi|320202349|gb|EFW76920.1| Paraquat-inducible protein B [Escherichia coli EC4100B]
gi|323157155|gb|EFZ43278.1| paraquat-inducible protein B [Escherichia coli EPECa14]
gi|323159582|gb|EFZ45562.1| paraquat-inducible protein B [Escherichia coli E128010]
gi|323175421|gb|EFZ61016.1| paraquat-inducible protein B [Escherichia coli 1180]
gi|323379204|gb|ADX51472.1| Mammalian cell entry related domain protein [Escherichia coli KO11]
gi|323942867|gb|EGB39032.1| paraquat-inducible protein B [Escherichia coli E482]
gi|323947259|gb|EGB43267.1| paraquat-inducible protein B [Escherichia coli H120]
gi|323962838|gb|EGB58413.1| paraquat-inducible protein B [Escherichia coli H489]
gi|323973172|gb|EGB68364.1| paraquat-inducible protein B [Escherichia coli TA007]
gi|324117184|gb|EGC11092.1| paraquat-inducible protein B [Escherichia coli E1167]
gi|331065689|gb|EGI37582.1| paraquat-inducible protein B [Escherichia coli TA271]
Length = 546
Score = 60.7 bits (144), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|323967198|gb|EGB62622.1| pqiB protein [Escherichia coli M863]
gi|323976669|gb|EGB71757.1| pqiB protein [Escherichia coli TW10509]
gi|327253743|gb|EGE65372.1| paraquat-inducible protein B [Escherichia coli STEC_7v]
Length = 546
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
S T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNSPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 75/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNSPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|269128022|ref|YP_003301392.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268312980|gb|ACY99354.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 432
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 45/132 (34%), Gaps = 6/132 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M S+ +V F + ++ + R + + P ++ + S GL + V +
Sbjct: 1 MNSR-ILINVAAFAALGVVLVVWAFSSVVRFDFIERP-YQITVVFESS-PGLHPNFEVDY 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G +G+I + L + K I + + + TA + G +EL+ +
Sbjct: 58 LGTRIGKIDSVRL---RDGQVVVKLDIDRNVRIPRAVTAAAARKSAVGEPVVELTPKPGQ 114
Query: 121 KKTIFQIATERN 132
Sbjct: 115 ADGPRMPTDGSG 126
>gi|331699190|ref|YP_004335429.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953879|gb|AEA27576.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
Length = 433
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 32/105 (30%), Gaps = 3/105 (2%)
Query: 8 TSVGLFVVSILFFSFFS-IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG + FS L V I+ V L S V+ + VG
Sbjct: 12 ALVGALLSGCGVFSGGLRGVDLPGGADLGDDPYSVTIQF-ADVADLVPQSLVKVADVSVG 70
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + +D N + D L + A +R L G +
Sbjct: 71 TVSDIRVDPATWNAV-VTVKVNHDVTLPANAVARVRDTSLLGEKF 114
>gi|118472804|ref|YP_889050.1| virulence factor [Mycobacterium smegmatis str. MC2 155]
gi|118174091|gb|ABK74987.1| virulence factor [Mycobacterium smegmatis str. MC2 155]
Length = 424
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 30/272 (11%), Positives = 86/272 (31%), Gaps = 2/272 (0%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
GL V ++ L R + +I G V ++ D+ V+ G+ VG +
Sbjct: 39 LAGLATVVVVGLIIALAVTLFRGDFTKTEPVTLISDRVGLV--MNPDAKVKMRGVQVGTV 96
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + + TA I + + G +++L K + T+
Sbjct: 97 GRIETLPDGRAALHLDMDPGQLRLIPGNVTADIASSTVFGAKFVDLVPPGKPEGTLQPGQ 156
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + K++++ I + + T+++ E +
Sbjct: 157 VLQGEHVTVEVNTVFQQLTRVLDKIDPAKLNETLGAISAAFGGRGEKMGQTVSDFEALLE 216
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
L ++ ++++ + + V + T T+ + Q ++ L +
Sbjct: 217 KLEPSLPNLNRDIESMAVVSGAYGDAAPDLLKTIENTNRISDSIVDEQQNLDAFLVSSIG 276
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
++ + + ++ +
Sbjct: 277 LADVGNDVIGGNREALSTTLDLLAPTTDLLNE 308
>gi|186681881|ref|YP_001865077.1| hypothetical protein Npun_R1427 [Nostoc punctiforme PCC 73102]
gi|186464333|gb|ACC80134.1| Mammalian cell entry related domain protein [Nostoc punctiforme PCC
73102]
Length = 479
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/385 (9%), Positives = 115/385 (29%), Gaps = 20/385 (5%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLY 94
G ++I+ + G+ + VR+ G+ VG I + + I + D +
Sbjct: 45 GRSYKMIVEF-ANAGGMQKGAIVRYRGVKVGTISQVLPKAN---AIDIEIEIAQTDLIIP 100
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
GL + I++ + + R ++ N +
Sbjct: 101 RDVVVEANQSGLISESVIDI---TPKTTLPAGVVIARPLDKSCDSSLIVCNGSRLKGQIG 157
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + +T A++ + + + +
Sbjct: 158 ISVDELIRSSTDLASSYNDPKFYRNVNRVLETTTGAASSFTELSQDLQGLT--KSLRQQL 215
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
NTF+ + + + A Q VN+ ++ + + +
Sbjct: 216 NTFSATANSVQRATNQLNASANQTVNKFGATATQANRLLNNLDNLLTTNRSSLVGALNNI 275
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
E ++ +S S + L N+ ++N + + +R+ + + +
Sbjct: 276 TETSNQLRVTVSSLSPSVNRLTQGELLNNLEALSANAAQASANLRDASKTLNDPKNVVL- 334
Query: 335 IENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
++ + + + ++ S ++ ++ + + +++++ + +
Sbjct: 335 LQQTLDSARVTFENTQKITSDLDELTGDPNFRKNLRQLVNGLSGLVSSTQEMQQQVQ--- 391
Query: 395 NNLQNFSQSGLNDIQNLVRKLQETV 419
+ L+ ++ V K +
Sbjct: 392 ------VATTLDSVKAAVNKPNNLI 410
>gi|121636510|ref|YP_976733.1| mce-family protein mce2Da [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988982|ref|YP_002643669.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|121492157|emb|CAL70622.1| mce-family protein mce2Da [first part] [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|224772095|dbj|BAH24901.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length = 516
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/292 (9%), Positives = 79/292 (27%), Gaps = 8/292 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
Y ++ L V+ G+ VG I + +
Sbjct: 39 RLYRKLTTTTVVAYFSEALALYPGDKVQIMGVRVGSIDKIEPAGD---KMRVTLHYSNKY 95
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + TA+I L I+LS + A +R + P + +
Sbjct: 96 QVPATATASILNPSLVASRTIQLSPPYTGGPVLQDGAVIPIERTQV---PVEWDQLRDSI 152
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+++ + R + ++ + +A N++S ++ + +
Sbjct: 153 NGILRQLGPTERQPKGPFGDLIESAADNLAGKGRQLNETLNSLSQALTALNEGRGDFVAI 212
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ +L + + V+ D V+ TV +
Sbjct: 213 TRSLALFVSALYQNDQQFVALNENLAEFTDWFTKSDHDLADTVERIDDVLGTVRKF--VS 270
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
+ +++L ++ ++ + + + + + +
Sbjct: 271 DNRSVLAADVNNLADATTTLVQPEPRDGLETALHVLPTYASNFNNLYYPLHS 322
>gi|206576402|ref|YP_002239408.1| mce-related protein [Klebsiella pneumoniae 342]
gi|288936258|ref|YP_003440317.1| hypothetical protein Kvar_3405 [Klebsiella variicola At-22]
gi|290510686|ref|ZP_06550056.1| paraquat-inducible protein B [Klebsiella sp. 1_1_55]
gi|206565460|gb|ACI07236.1| mce-related protein [Klebsiella pneumoniae 342]
gi|288890967|gb|ADC59285.1| Mammalian cell entry related domain protein [Klebsiella variicola
At-22]
gi|289777402|gb|EFD85400.1| paraquat-inducible protein B [Klebsiella sp. 1_1_55]
Length = 545
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/218 (12%), Positives = 64/218 (29%), Gaps = 17/218 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHS 81
S + + ++ SV GL + V F GI +G + +
Sbjct: 276 SIQDSVFTEHIDYVMFFKDSVRGLQPGAPVEFRGIRLGTVGKVPFFIPGLKQRLNDDYRI 335
Query: 82 LAKALIRPDTPL-----YPSTTATIR---TQGLAGITYIELSTLRKEKKTI--FQIATER 131
+ + P + P+ A I +GL G + + A R
Sbjct: 336 PVEVRVEPQRLVNQLGGDPNIRAHIDDLINRGLRGSLKTGNLVTGALYIDLDFYPKAPPR 395
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ P A+ + + + + + + T+T+A E +
Sbjct: 396 GKIQEFNGYPIIPTISGGLAQIQQRLMDALDKINNLPLNPLLEQATSTLAQSEKTMQHVQ 455
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ ++K+ + + +D + T + +
Sbjct: 456 TTLDSLNKITSSQSMQQLPADMQTTLRELNRSMQGFQP 493
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/405 (7%), Positives = 92/405 (22%), Gaps = 31/405 (7%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR--PDTPLYPSTTATIRTQGL 106
LS V F G VG + D + H + I D + + +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDAQ-KRHITYQLFINAPNDRLVTTNVRFWKDSGIA 225
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
+T + T+F + + + + H+
Sbjct: 226 VDLTAAGMRVEMGSLSTLFGGGVSFD--------------IPEGLDLGEPVANKTEYHLF 271
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
++I+ + T + + + + +
Sbjct: 272 DDQKSIQDSVFTEHIDYVMFFKDSVRGLQPGAPVEFRGIRLGTVGKVPFFIPGLKQRLND 331
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
++ + ++ + + + ++ + +D
Sbjct: 332 DYRIPVEVRVEPQRLVNQLGGDPNIRAHIDDLINRGLRGSLKTGNLVTGALYIDLDFYPK 391
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + + + + + +
Sbjct: 392 APPRGKIQEFNGYPIIPTISGGLAQIQQRLMDALDKINNLPLNPLLEQATSTLAQSEKTM 451
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
Q + +N I++ + L D Q + + + + N
Sbjct: 452 QHVQTTLDSLNKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYN 499
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ +++L + + L +V+ E K +PK
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNDKSNALVF--EAKDKKDPQPK 542
>gi|293433248|ref|ZP_06661676.1| paraquat-inducible protein B [Escherichia coli B088]
gi|291324067|gb|EFE63489.1| paraquat-inducible protein B [Escherichia coli B088]
Length = 531
Score = 60.3 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 152 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 190
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 191 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 250
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 251 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 310
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 311 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 370
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 371 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 430
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 431 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 478
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 479 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 527
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 252 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 311
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 312 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 369
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 370 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 429
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 430 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 484
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 485 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 514
>gi|108800634|ref|YP_640831.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119869773|ref|YP_939725.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771053|gb|ABG09775.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119695862|gb|ABL92935.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 494
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/259 (10%), Positives = 68/259 (26%), Gaps = 7/259 (2%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ P + VR +G+ VG+I + + + D P+ A
Sbjct: 37 TITAYFPT-ATAIYPGDEVRVSGVKVGKIEAITPEGTET---KMLLSVDRDVPVPADAKA 92
Query: 100 TIRTQGLAGITY---IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
I Q L + K ++ A+ A
Sbjct: 93 VIVAQNLVAERFVALTPAYRTGDGPKMPDGGVIPSDRTAVPVEWDEVKEQLTRLATALGP 152
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ S + + I++ L + L+ + + T
Sbjct: 153 EAGVSDTSVSRFIDSAADALDGNGEKLRDTLAQLSGVARVFAEGSGNIVDIIKNLQIFVT 212
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + A ++ ++ + + + +V V R+ T +
Sbjct: 213 ALRDSKQQIVQFENRLATLTSVLDDSRSDLDAALSELSVALGEVQRFVAGTRDLTAEQIQ 272
Query: 277 VGQKIDHLLSDFSSKMKSK 295
+ +L D + +++
Sbjct: 273 RLANVTQVLVDNRTALENV 291
>gi|183980216|ref|YP_001848507.1| MCE-family protein Mce6F [Mycobacterium marinum M]
gi|183173542|gb|ACC38652.1| MCE-family protein Mce6F [Mycobacterium marinum M]
Length = 412
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 6/142 (4%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGL + ++ ++ I L + + + + S GL + V +G+ +G++
Sbjct: 22 VGLLLTLVVSVAYLLIGVLHV--RPLASNYALTVELGQS-GGLLPNQDVALHGVQIGKVE 78
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
L + + A I + ++T + AG Y++ + E +
Sbjct: 79 SLEISRTG---VTAILRINAGVRIPVASTVRVSALSPAGEQYVDFNATSGEGPFLKNGDA 135
Query: 130 ERNQRAMITATPSGINYFISNA 151
R TP+ +
Sbjct: 136 ISQDRTTTPVTPAELLQHADGV 157
>gi|332095946|gb|EGJ00953.1| paraquat-inducible protein B [Shigella dysenteriae 155-74]
Length = 528
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 149 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 187
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 188 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 247
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 248 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 307
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 308 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 367
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 368 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 427
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 428 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 475
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 476 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 524
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 249 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 308
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 309 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 366
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 367 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 426
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 427 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 481
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 482 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 511
>gi|300819194|ref|ZP_07099395.1| putative paraquat-inducible protein B [Escherichia coli MS 107-1]
gi|300824160|ref|ZP_07104279.1| putative paraquat-inducible protein B [Escherichia coli MS 119-7]
gi|300921009|ref|ZP_07137396.1| putative paraquat-inducible protein B [Escherichia coli MS 115-1]
gi|300925368|ref|ZP_07141254.1| putative paraquat-inducible protein B [Escherichia coli MS 182-1]
gi|300929650|ref|ZP_07145111.1| putative paraquat-inducible protein B [Escherichia coli MS 187-1]
gi|300949679|ref|ZP_07163661.1| putative paraquat-inducible protein B [Escherichia coli MS 116-1]
gi|300955395|ref|ZP_07167771.1| putative paraquat-inducible protein B [Escherichia coli MS 175-1]
gi|301327221|ref|ZP_07220481.1| putative paraquat-inducible protein B [Escherichia coli MS 78-1]
gi|301643474|ref|ZP_07243522.1| putative paraquat-inducible protein B [Escherichia coli MS 146-1]
gi|309795059|ref|ZP_07689479.1| putative paraquat-inducible protein B [Escherichia coli MS 145-7]
gi|300317684|gb|EFJ67468.1| putative paraquat-inducible protein B [Escherichia coli MS 175-1]
gi|300412000|gb|EFJ95310.1| putative paraquat-inducible protein B [Escherichia coli MS 115-1]
gi|300418497|gb|EFK01808.1| putative paraquat-inducible protein B [Escherichia coli MS 182-1]
gi|300450919|gb|EFK14539.1| putative paraquat-inducible protein B [Escherichia coli MS 116-1]
gi|300462427|gb|EFK25920.1| putative paraquat-inducible protein B [Escherichia coli MS 187-1]
gi|300523336|gb|EFK44405.1| putative paraquat-inducible protein B [Escherichia coli MS 119-7]
gi|300528213|gb|EFK49275.1| putative paraquat-inducible protein B [Escherichia coli MS 107-1]
gi|300846172|gb|EFK73932.1| putative paraquat-inducible protein B [Escherichia coli MS 78-1]
gi|301078188|gb|EFK92994.1| putative paraquat-inducible protein B [Escherichia coli MS 146-1]
gi|308121363|gb|EFO58625.1| putative paraquat-inducible protein B [Escherichia coli MS 145-7]
gi|324019037|gb|EGB88256.1| putative paraquat-inducible protein B [Escherichia coli MS 117-3]
Length = 552
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 211
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 212 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 271
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 272 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 331
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 332 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 391
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 392 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 451
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 452 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 499
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 500 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 548
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 273 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 332
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 333 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 390
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 391 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 450
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 451 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 505
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 506 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 535
>gi|331657016|ref|ZP_08357978.1| paraquat-inducible protein B [Escherichia coli TA206]
gi|222032675|emb|CAP75414.1| Paraquat-inducible protein B [Escherichia coli LF82]
gi|307552783|gb|ADN45558.1| paraquat-inducible protein B [Escherichia coli ABU 83972]
gi|312945464|gb|ADR26291.1| paraquat-inducible protein B [Escherichia coli O83:H1 str. NRG
857C]
gi|320196562|gb|EFW71185.1| Paraquat-inducible protein B [Escherichia coli WV_060327]
gi|331055264|gb|EGI27273.1| paraquat-inducible protein B [Escherichia coli TA206]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKGKKDPEPK 542
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|117623162|ref|YP_852075.1| paraquat-inducible protein B [Escherichia coli APEC O1]
gi|331646210|ref|ZP_08347313.1| paraquat-inducible protein B [Escherichia coli M605]
gi|115512286|gb|ABJ00361.1| PqiB [Escherichia coli APEC O1]
gi|315287569|gb|EFU46975.1| putative paraquat-inducible protein B [Escherichia coli MS 110-3]
gi|331044962|gb|EGI17089.1| paraquat-inducible protein B [Escherichia coli M605]
Length = 552
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 211
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 212 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 271
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 272 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 331
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 332 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 391
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 392 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 451
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 452 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 499
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 500 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 548
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 273 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 332
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 333 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 390
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 391 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 450
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 451 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 505
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 506 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 535
>gi|332102220|gb|EGJ05566.1| paraquat-inducible protein B [Shigella sp. D9]
Length = 566
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 187 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 225
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 226 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 285
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 286 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 345
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 346 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 405
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 406 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 465
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 466 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 513
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 514 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 562
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 287 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 346
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 347 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 404
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 405 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 464
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 465 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 519
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 520 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 549
>gi|215486069|ref|YP_002328500.1| paraquat-inducible protein B [Escherichia coli O127:H6 str.
E2348/69]
gi|218557849|ref|YP_002390762.1| paraquat-inducible protein B [Escherichia coli S88]
gi|218688787|ref|YP_002396999.1| paraquat-inducible protein B [Escherichia coli ED1a]
gi|306812602|ref|ZP_07446795.1| paraquat-inducible protein B [Escherichia coli NC101]
gi|312968990|ref|ZP_07783197.1| paraquat-inducible protein B [Escherichia coli 2362-75]
gi|215264141|emb|CAS08485.1| paraquat-inducible protein B [Escherichia coli O127:H6 str.
E2348/69]
gi|218364618|emb|CAR02304.1| paraquat-inducible protein B [Escherichia coli S88]
gi|218426351|emb|CAR07176.1| paraquat-inducible protein B [Escherichia coli ED1a]
gi|281178075|dbj|BAI54405.1| paraquat-inducible protein B [Escherichia coli SE15]
gi|294491713|gb|ADE90469.1| paraquat-inducible protein B [Escherichia coli IHE3034]
gi|305853365|gb|EFM53804.1| paraquat-inducible protein B [Escherichia coli NC101]
gi|307627629|gb|ADN71933.1| paraquat-inducible protein B [Escherichia coli UM146]
gi|312286392|gb|EFR14305.1| paraquat-inducible protein B [Escherichia coli 2362-75]
gi|323190765|gb|EFZ76034.1| paraquat-inducible protein B [Escherichia coli RN587/1]
gi|323953347|gb|EGB49213.1| paraquat-inducible protein B [Escherichia coli H252]
gi|323958250|gb|EGB53959.1| paraquat-inducible protein B [Escherichia coli H263]
gi|330910724|gb|EGH39234.1| paraquat-inducible protein B [Escherichia coli AA86]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|91210046|ref|YP_540032.1| paraquat-inducible protein B [Escherichia coli UTI89]
gi|237707066|ref|ZP_04537547.1| paraquat-inducible protein B [Escherichia sp. 3_2_53FAA]
gi|91071620|gb|ABE06501.1| paraquat-inducible protein B [Escherichia coli UTI89]
gi|226898276|gb|EEH84535.1| paraquat-inducible protein B [Escherichia sp. 3_2_53FAA]
Length = 566
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 187 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 225
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 226 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 285
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 286 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 345
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 346 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 405
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 406 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 465
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 466 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 513
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 514 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 562
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 287 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 346
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 347 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 404
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 405 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 464
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 465 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 519
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 520 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 549
>gi|169631112|ref|YP_001704761.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243079|emb|CAM64107.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 419
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/328 (10%), Positives = 81/328 (24%), Gaps = 25/328 (7%)
Query: 9 SVGLFVVSILFFSF--FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
G+F +F + + +L ++ + GL + V G+ VG
Sbjct: 43 IAGIFGARTIFPAVKNMVMPYLGNAHIPLLDHTRSLCANFRDGSGLYKGNKVLLLGVEVG 102
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + P+H I D L A +Q + IEL+ E
Sbjct: 103 TVTAVT---NKPDHVEVDFEIPSDMELPADVGAASYSQSVITNRSIELTRPWSEGPKFAG 159
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ P + S + + ++ + L T+
Sbjct: 160 AQCISTENTRT---PVTVTESFSAIGELADTLMQATPGQDPGDSPGVRALNKTLKGAARS 216
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + + P+ +++ I + N
Sbjct: 217 LDGVGPGFKEMLNSLTKMVGDPYKANADYRQLFENSAI-----------------VTSNW 259
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
N F + + + F + + LL + ++ +
Sbjct: 260 LQYWNEFAGVVTSLPEVGRLIAGISDNFAQALDNLVSLLPTLNGMVQRASGRLYKNVFDK 319
Query: 307 STSNMRSSISAIREITDQRQKIISTINT 334
+R ++A + +
Sbjct: 320 LVPWIRDILNAYTPHILTFFNTLPPVIN 347
>gi|30062488|ref|NP_836659.1| paraquat-inducible protein B [Shigella flexneri 2a str. 2457T]
gi|56479780|ref|NP_706874.2| paraquat-inducible protein B [Shigella flexneri 2a str. 301]
gi|82776242|ref|YP_402591.1| paraquat-inducible protein B [Shigella dysenteriae Sd197]
gi|110641140|ref|YP_668870.1| paraquat-inducible protein B [Escherichia coli 536]
gi|110804967|ref|YP_688487.1| paraquat-inducible protein B [Shigella flexneri 5 str. 8401]
gi|170683101|ref|YP_001744218.1| paraquat-inducible protein B [Escherichia coli SMS-3-5]
gi|191172073|ref|ZP_03033617.1| paraquat-inducible protein B [Escherichia coli F11]
gi|218700530|ref|YP_002408159.1| paraquat-inducible protein B [Escherichia coli IAI39]
gi|218704374|ref|YP_002411893.1| paraquat-inducible protein B [Escherichia coli UMN026]
gi|291281951|ref|YP_003498769.1| Paraquat-inducible protein B [Escherichia coli O55:H7 str. CB9615]
gi|293404250|ref|ZP_06648244.1| paraquat-inducible protein B [Escherichia coli FVEC1412]
gi|298380034|ref|ZP_06989639.1| paraquat-inducible protein B [Escherichia coli FVEC1302]
gi|331662363|ref|ZP_08363286.1| paraquat-inducible protein B [Escherichia coli TA143]
gi|331682455|ref|ZP_08383074.1| paraquat-inducible protein B [Escherichia coli H299]
gi|30040734|gb|AAP16465.1| paraquat-inducible protein B [Shigella flexneri 2a str. 2457T]
gi|56383331|gb|AAN42581.2| paraquat-inducible protein B [Shigella flexneri 2a str. 301]
gi|81240390|gb|ABB61100.1| paraquat-inducible protein B [Shigella dysenteriae Sd197]
gi|110342732|gb|ABG68969.1| paraquat-inducible protein B [Escherichia coli 536]
gi|110614515|gb|ABF03182.1| paraquat-inducible protein B [Shigella flexneri 5 str. 8401]
gi|170520819|gb|ACB18997.1| paraquat-inducible protein B [Escherichia coli SMS-3-5]
gi|190907600|gb|EDV67195.1| paraquat-inducible protein B [Escherichia coli F11]
gi|209774504|gb|ACI85564.1| paraquat-inducible protein B [Escherichia coli]
gi|218370516|emb|CAR18323.1| paraquat-inducible protein B [Escherichia coli IAI39]
gi|218431471|emb|CAR12349.1| paraquat-inducible protein B [Escherichia coli UMN026]
gi|281600313|gb|ADA73297.1| Paraquat-inducible protein B [Shigella flexneri 2002017]
gi|284920795|emb|CBG33858.1| paraquat-inducible protein B [Escherichia coli 042]
gi|290761824|gb|ADD55785.1| Paraquat-inducible protein B [Escherichia coli O55:H7 str. CB9615]
gi|291428836|gb|EFF01861.1| paraquat-inducible protein B [Escherichia coli FVEC1412]
gi|298279732|gb|EFI21240.1| paraquat-inducible protein B [Escherichia coli FVEC1302]
gi|313650801|gb|EFS15202.1| paraquat-inducible protein B [Shigella flexneri 2a str. 2457T]
gi|320181979|gb|EFW56884.1| Paraquat-inducible protein B [Shigella boydii ATCC 9905]
gi|320653717|gb|EFX21791.1| paraquat-inducible protein B [Escherichia coli O55:H7 str. 3256-97
TW 07815]
gi|320659560|gb|EFX27123.1| paraquat-inducible protein B [Escherichia coli O55:H7 str. USDA
5905]
gi|323174942|gb|EFZ60557.1| paraquat-inducible protein B [Escherichia coli LT-68]
gi|331060785|gb|EGI32749.1| paraquat-inducible protein B [Escherichia coli TA143]
gi|331080086|gb|EGI51265.1| paraquat-inducible protein B [Escherichia coli H299]
gi|332092510|gb|EGI97583.1| paraquat-inducible protein B [Shigella boydii 5216-82]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|323938057|gb|EGB34319.1| paraquat-inducible protein B [Escherichia coli E1520]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|254230931|ref|ZP_04924258.1| MCE-family protein mce2D [Mycobacterium tuberculosis C]
gi|124599990|gb|EAY59000.1| MCE-family protein mce2D [Mycobacterium tuberculosis C]
Length = 508
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/286 (9%), Positives = 80/286 (27%), Gaps = 9/286 (3%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V+ ++ L V+ G+ VG I + + + +
Sbjct: 46 TTTVVAYFSEALA-LYPGDKVQIMGVRVGSIDKIEPAGD---KMRVTLHYSNKYQVPATA 101
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
TA+I L I+LS + A +R + P + + ++
Sbjct: 102 TASILNPSLVASRTIQLSPPYTGGPVLQDGAVIPIERTQV---PVEWDQLRDSINGILRQ 158
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + R + ++ + +A N++S ++ + +
Sbjct: 159 LGPTERQPKGPFGDLIESAADNLAGKGRQLNETLNSLSQALTALNEGRGDFVAITRSLAL 218
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ +L + + V+ D V+ TV + +
Sbjct: 219 FVSALYQNDQQFVALNENLAEFTDWFTKSDHDLADTVERIDDVLGTVRKF--VSDNRSVL 276
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
+++L ++ ++ + + + + + +
Sbjct: 277 AADVNNLADATTTLVQPEPRDGLETALHVLPTYASNFNNLYYPLHS 322
>gi|292487863|ref|YP_003530738.1| Paraquat-inducible protein B [Erwinia amylovora CFBP1430]
gi|291553285|emb|CBA20330.1| Paraquat-inducible protein B [Erwinia amylovora CFBP1430]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/404 (8%), Positives = 88/404 (21%), Gaps = 25/404 (6%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L V F G VG + D + + + P T +R
Sbjct: 165 SEKAGQLKAGDPVLFRGYRVGSVETSAFDADKR---MMTYQLFIAAPYDRLVTTNVRFWK 221
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+GI ++ + + I + AE S +
Sbjct: 222 DSGIAVDMSASGMRVEMGSLTTLFSGGVSFDIPDGWESGTSAENKAEYRLFNDQRSIQDS 281
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ + + ++ T I +
Sbjct: 282 LYSVHKDFLLF----------FNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIAQRLN 331
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ I ++ + + ++ + +D
Sbjct: 332 NDFRIPVLIRIEPDRFKTQLGTDFNFEQHLKDGVAAGLRASLKSANLLTGALYIDLDFYN 391
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + A + +N +
Sbjct: 392 NAKPVSSPATFAQYSVIPTASGGLAQIQQKLMESLDKINHLPLNPLLNEAAGTLKESQRT 451
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ + + +N +++ + L D Q + + +
Sbjct: 452 LKELQKTLDNLNQLTSSQSMKELPADMQSTLRELNRSMKGFQP------------GSPAY 499
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
N + +++L + + L +V+ E G K
Sbjct: 500 NKMVGDMQRLDQVLRELQPVLKTLNNKSNALVFEAEPGRDPQPK 543
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-------QEYPNHSLAKALIRPD 90
++ SV GL + V F GI +G + + I PD
Sbjct: 289 FLLFFNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIAQRLNNDFRIPVLIRIEPD 345
>gi|15800810|ref|NP_286826.1| paraquat-inducible protein B [Escherichia coli O157:H7 EDL933]
gi|15830289|ref|NP_309062.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. Sakai]
gi|168758977|ref|ZP_02783984.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4401]
gi|168771732|ref|ZP_02796739.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4486]
gi|168776194|ref|ZP_02801201.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4196]
gi|168783956|ref|ZP_02808963.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4076]
gi|168787382|ref|ZP_02812389.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC869]
gi|208815346|ref|ZP_03256525.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4045]
gi|209399494|ref|YP_002269620.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4115]
gi|254792151|ref|YP_003076988.1| paraquat-inducible protein B [Escherichia coli O157:H7 str.
TW14359]
gi|261227454|ref|ZP_05941735.1| paraquat-inducible protein B [Escherichia coli O157:H7 str.
FRIK2000]
gi|261256123|ref|ZP_05948656.1| paraquat-inducible protein B [Escherichia coli O157:H7 str.
FRIK966]
gi|12514133|gb|AAG55437.1|AE005285_4 paraquat-inducible protein B [Escherichia coli O157:H7 str. EDL933]
gi|13360495|dbj|BAB34458.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. Sakai]
gi|187768348|gb|EDU32192.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4196]
gi|188998765|gb|EDU67751.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4076]
gi|189354323|gb|EDU72742.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4401]
gi|189359577|gb|EDU77996.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4486]
gi|189372627|gb|EDU91043.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC869]
gi|208731994|gb|EDZ80682.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4045]
gi|209160894|gb|ACI38327.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4115]
gi|209774498|gb|ACI85561.1| paraquat-inducible protein B [Escherichia coli]
gi|209774500|gb|ACI85562.1| paraquat-inducible protein B [Escherichia coli]
gi|209774502|gb|ACI85563.1| paraquat-inducible protein B [Escherichia coli]
gi|209774506|gb|ACI85565.1| paraquat-inducible protein B [Escherichia coli]
gi|254591551|gb|ACT70912.1| paraquat-inducible protein B [Escherichia coli O157:H7 str.
TW14359]
gi|320192560|gb|EFW67201.1| Paraquat-inducible protein B [Escherichia coli O157:H7 str. EC1212]
gi|320637819|gb|EFX07611.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. G5101]
gi|320642944|gb|EFX12145.1| paraquat-inducible protein B [Escherichia coli O157:H- str. 493-89]
gi|320648401|gb|EFX17056.1| paraquat-inducible protein B [Escherichia coli O157:H- str. H 2687]
gi|320664331|gb|EFX31482.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. LSU-61]
gi|326338152|gb|EGD61981.1| Paraquat-inducible protein B [Escherichia coli O157:H7 str. 1125]
gi|326346129|gb|EGD69867.1| Paraquat-inducible protein B [Escherichia coli O157:H7 str. 1044]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|188493783|ref|ZP_03001053.1| paraquat-inducible protein B [Escherichia coli 53638]
gi|188488982|gb|EDU64085.1| paraquat-inducible protein B [Escherichia coli 53638]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTNNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|309786683|ref|ZP_07681303.1| paraquat-inducible protein B [Shigella dysenteriae 1617]
gi|308925376|gb|EFP70863.1| paraquat-inducible protein B [Shigella dysenteriae 1617]
Length = 528
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 149 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 187
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 188 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 247
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 248 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSIRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 307
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 308 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 367
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 368 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 427
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 428 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 475
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 476 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 524
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/270 (9%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ S+ GL + V F GI +G + +
Sbjct: 249 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSIRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 308
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 309 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 366
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 367 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 426
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 427 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 481
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 482 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 511
>gi|320106000|ref|YP_004181590.1| Mammalian cell entry related domain-containing protein [Terriglobus
saanensis SP1PR4]
gi|319924521|gb|ADV81596.1| Mammalian cell entry related domain protein [Terriglobus saanensis
SP1PR4]
Length = 361
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/355 (9%), Positives = 100/355 (28%), Gaps = 21/355 (5%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQ--YDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
K VG+ V L ++ ++ ++ + V S GL ++V
Sbjct: 8 KWSQLKVGVIVAVSLVLLITLLFLMTSASGTGFFAKKIHVKTYFENSA-GLKPGAAVNLQ 66
Query: 62 GIPVGRIVGLFLDQEYPNH---SLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELST 116
G+ VG + + + + + + + A + T G+ G T +++++
Sbjct: 67 GVTVGNVDKVKVVPDASRKLTPVEVTMKLDTKYLPMMKKDSKAALSTVGVLGDTVVDINS 126
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
T+ N ++ K + + I+ +++ +
Sbjct: 127 QFATGPTLADGDE-------------LKTLESPNLQDVVKASQGTIESLNVILAKMDRIV 173
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ ++ ++ + ++ S + + +I L+ +
Sbjct: 174 EAISQGKGAVGQLIYDDSLYTRANATVGELQKLSQNLNSGKGSIGKLLNDDEMYNHLNAT 233
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + +++ ET + + D +K
Sbjct: 234 TAKLDHIATELDAGKGSAGKLLKDDALYNNLNETLKHANSIMADADAGKGGIGLLVKDPA 293
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L + ++ + I K + + ++ + +
Sbjct: 294 FAQKLNDTITRLDSVMTGIDKGEGTAGLLVKDPALYHNLDKLAVDSQSLVNTIRS 348
>gi|256787964|ref|ZP_05526395.1| secreted protein [Streptomyces lividans TK24]
gi|289771851|ref|ZP_06531229.1| secreted protein [Streptomyces lividans TK24]
gi|289702050|gb|EFD69479.1| secreted protein [Streptomyces lividans TK24]
Length = 413
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V + V L S+VR N + VGRI G+ L E + I
Sbjct: 48 LPGGADLGDHPYTVTAEL-QDVLSLVPHSAVRVNDVAVGRITGIEL-GEDDWSARVTMEI 105
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE 113
+ L TA + L G Y++
Sbjct: 106 NGEVRLPADATARLEQSSLLGEKYVQ 131
>gi|218548460|ref|YP_002382251.1| paraquat-inducible protein B [Escherichia fergusonii ATCC 35469]
gi|218356001|emb|CAQ88617.1| paraquat-inducible protein B [Escherichia fergusonii ATCC 35469]
gi|324113725|gb|EGC07700.1| paraquat-inducible protein B [Escherichia fergusonii B253]
gi|325496882|gb|EGC94741.1| paraquat-inducible protein B [Escherichia fergusonii ECD227]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/411 (10%), Positives = 91/411 (22%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGFRVGSVETSTFDTQKRN---------------------ISYQLFVN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 SAFVLYDDQRSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ--------K 280
+ D + I + +++D V + ++ + + G
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENTDVVKHMAELLQRGLRGSLKTGNLVTGALYVD 385
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+D + + + + + + I N S
Sbjct: 386 LDFYPNTPAITGVREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLDPMIAQATNTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + M +N I A + L D Q + + +
Sbjct: 446 ESQRTMKSLQTTMDSMNKIIASQSMQQLPADMQNTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 61/218 (27%), Gaps = 17/218 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHS 81
S + + ++ SV GL + V F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYRI 335
Query: 82 LAKALIRPD---TPLYPST-----TATIRTQGLAGITYIELSTLRKEKKTIFQIATER-- 131
I P+ L +T A + +GL G +
Sbjct: 336 PVLIRIEPERLKMQLGENTDVVKHMAELLQRGLRGSLKTGNLVTGALYVDLDFYPNTPAI 395
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
A+ + + + + ++ + T T++ + L
Sbjct: 396 TGVREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLDPMIAQATNTLSESQRTMKSLQ 455
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ ++K++ + + +D +NT + +
Sbjct: 456 TTMDSMNKIIASQSMQQLPADMQNTLRELNRSMQGFQP 493
>gi|194435236|ref|ZP_03067461.1| paraquat-inducible protein B [Shigella dysenteriae 1012]
gi|293409329|ref|ZP_06652905.1| conserved hypothetical protein [Escherichia coli B354]
gi|293414231|ref|ZP_06656880.1| paraquat-inducible protein B [Escherichia coli B185]
gi|300896330|ref|ZP_07114873.1| putative paraquat-inducible protein B [Escherichia coli MS 198-1]
gi|300902886|ref|ZP_07120831.1| putative paraquat-inducible protein B [Escherichia coli MS 84-1]
gi|300937700|ref|ZP_07152502.1| putative paraquat-inducible protein B [Escherichia coli MS 21-1]
gi|300982997|ref|ZP_07176401.1| putative paraquat-inducible protein B [Escherichia coli MS 200-1]
gi|301302433|ref|ZP_07208564.1| putative paraquat-inducible protein B [Escherichia coli MS 124-1]
gi|331651973|ref|ZP_08352992.1| paraquat-inducible protein B [Escherichia coli M718]
gi|331672480|ref|ZP_08373270.1| paraquat-inducible protein B [Escherichia coli TA280]
gi|194416525|gb|EDX32669.1| paraquat-inducible protein B [Shigella dysenteriae 1012]
gi|291434289|gb|EFF07262.1| paraquat-inducible protein B [Escherichia coli B185]
gi|291469797|gb|EFF12281.1| conserved hypothetical protein [Escherichia coli B354]
gi|300307014|gb|EFJ61534.1| putative paraquat-inducible protein B [Escherichia coli MS 200-1]
gi|300359795|gb|EFJ75665.1| putative paraquat-inducible protein B [Escherichia coli MS 198-1]
gi|300405028|gb|EFJ88566.1| putative paraquat-inducible protein B [Escherichia coli MS 84-1]
gi|300457261|gb|EFK20754.1| putative paraquat-inducible protein B [Escherichia coli MS 21-1]
gi|300842272|gb|EFK70032.1| putative paraquat-inducible protein B [Escherichia coli MS 124-1]
gi|315257999|gb|EFU37967.1| putative paraquat-inducible protein B [Escherichia coli MS 85-1]
gi|324012933|gb|EGB82152.1| putative paraquat-inducible protein B [Escherichia coli MS 60-1]
gi|331050251|gb|EGI22309.1| paraquat-inducible protein B [Escherichia coli M718]
gi|331070386|gb|EGI41751.1| paraquat-inducible protein B [Escherichia coli TA280]
Length = 552
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 211
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 212 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 271
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 272 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 331
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 332 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 391
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 392 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 451
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 452 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 499
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 500 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 548
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 273 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 332
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 333 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 390
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 391 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 450
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 451 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 505
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 506 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 535
>gi|74311508|ref|YP_309927.1| paraquat-inducible protein B [Shigella sonnei Ss046]
gi|73854985|gb|AAZ87692.1| paraquat-inducible protein B [Shigella sonnei Ss046]
gi|323165431|gb|EFZ51218.1| paraquat-inducible protein B [Shigella sonnei 53G]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 384
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 385 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 444
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 445 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 499
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 500 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|145224741|ref|YP_001135419.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315445071|ref|YP_004077950.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|145217227|gb|ABP46631.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315263374|gb|ADU00116.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 361
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/249 (14%), Positives = 85/249 (34%), Gaps = 7/249 (2%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ GLS + V +G+ +G++ + L +L + TPL +TA
Sbjct: 41 RYQAVF-ADLSGLSVGNDVTVSGMTLGKVTAVQLQDPN---ALVTFTVDDTTPLGSQSTA 96
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
IRT L G + + + + I + T T + + ++ + ++
Sbjct: 97 HIRTGTLLGQRVLTVQSEGDGSMSAMDIIPLTRTSSPYTLTEALGDLTTNSTGTDTAALN 156
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
++ + I+ I L T + IS L + + ++ + + ++ +
Sbjct: 157 EALNTLSDTIDQISPQLGPTFDGLARISEALNTRNTALRRLFGSGRDVTAVLAERSEEVS 216
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
L + A + ++L +I + + V + + T + V
Sbjct: 217 ALILNADDLVAMLAERRHTIVELLAHISAVARDVT---GLVHDNEQQLAPTLEKLNTVLA 273
Query: 280 KIDHLLSDF 288
++ +
Sbjct: 274 MLERQRDNI 282
>gi|227884090|ref|ZP_04001895.1| paraquat-inducible protein B [Escherichia coli 83972]
gi|300978388|ref|ZP_07174239.1| putative paraquat-inducible protein B [Escherichia coli MS 45-1]
gi|301047792|ref|ZP_07194845.1| putative paraquat-inducible protein B [Escherichia coli MS 185-1]
gi|227838842|gb|EEJ49308.1| paraquat-inducible protein B [Escherichia coli 83972]
gi|300300324|gb|EFJ56709.1| putative paraquat-inducible protein B [Escherichia coli MS 185-1]
gi|300409676|gb|EFJ93214.1| putative paraquat-inducible protein B [Escherichia coli MS 45-1]
gi|315291205|gb|EFU50565.1| putative paraquat-inducible protein B [Escherichia coli MS 153-1]
gi|315296239|gb|EFU55546.1| putative paraquat-inducible protein B [Escherichia coli MS 16-3]
gi|324009875|gb|EGB79094.1| putative paraquat-inducible protein B [Escherichia coli MS 57-2]
Length = 552
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 211
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 212 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 271
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 272 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 331
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 332 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 391
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 392 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 451
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 452 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 499
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 500 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKGKKDPEPK 548
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 273 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 332
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 333 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 390
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 391 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 450
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 451 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 505
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 506 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 535
>gi|226229262|ref|YP_002763368.1| putative transporter [Gemmatimonas aurantiaca T-27]
gi|226092453|dbj|BAH40898.1| putative transporter [Gemmatimonas aurantiaca T-27]
Length = 337
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/283 (12%), Positives = 81/283 (28%), Gaps = 14/283 (4%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
++ W+ +++ + ++ V G++ + V G+ GR+ + L P
Sbjct: 25 AAVLWVKQADLGGRQ--QQVVVRTREVGGVALGNPVVIRGVRSGRVESIALGA--PGWVT 80
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ L P + L G + TI A R + A
Sbjct: 81 ITLGLDRGVQLPPDPVVLLAAASLFGE----------WQATITTAAGVPPDRDLRAAIAE 130
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
+ A I+ + ++ ++ K + + +
Sbjct: 131 ARTESDTLAGAVMPDIAQLTTVAGRLAGDVAKVADRVQVAFDDAAAKELRESIRNFAHLS 190
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
T SKN D+ T + ++ A D + S +
Sbjct: 191 TVLAKTIDVQSKNLDQISGDVHTGVTRISAAADRLNTFSTRMDSATSRGELQQIVSSSQQ 250
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
++ T +++ K+D + S+ + ++ N
Sbjct: 251 AARELLTATTNLRDMTTKLDRTEARLSTVIARADSVFMKANGT 293
>gi|31791774|ref|NP_854267.1| hypothetical protein Mb0607 [Mycobacterium bovis AF2122/97]
gi|254363551|ref|ZP_04979597.1| MCE-family protein mce2D [Mycobacterium tuberculosis str. Haarlem]
gi|31617361|emb|CAD93469.1| MCE-FAMILY PROTEIN MCE2DA [FIRST PART] [Mycobacterium bovis
AF2122/97]
gi|134149065|gb|EBA41110.1| MCE-family protein mce2D [Mycobacterium tuberculosis str. Haarlem]
Length = 478
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 28/292 (9%), Positives = 79/292 (27%), Gaps = 8/292 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
Y ++ L V+ G+ VG I + +
Sbjct: 39 RLYRKLTTTTVVAYFSEALALYPGDKVQIMGVRVGSIDKIEPAGD---KMRVTLHYSNKY 95
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + TA+I L I+LS + A +R + P + +
Sbjct: 96 QVPATATASILNPSLVASRTIQLSPPYTGGPVLQDGAVIPIERTQV---PVEWDQLRDSI 152
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+++ + R + ++ + +A N++S ++ + +
Sbjct: 153 NGILRQLGPTERQPKGPFGDLIESAADNLAGKGRQLNETLNSLSQALTALNEGRGDFVAI 212
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ +L + + V+ D V+ TV +
Sbjct: 213 TRSLALFVSALYQNDQQFVALNENLAEFTDWFTKSDHDLADTVERIDDVLGTVRKF--VS 270
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
+ +++L ++ ++ + + + + + +
Sbjct: 271 DNRSVLAADVNNLADATTTLVQPEPRDGLETALHVLPTYASNFNNLYYPLHS 322
>gi|326331732|ref|ZP_08198020.1| virulence factor mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950531|gb|EGD42583.1| virulence factor mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 446
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/433 (10%), Positives = 104/433 (24%), Gaps = 32/433 (7%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+G+ V+ L +G V VD + + V N +PVG
Sbjct: 3 AAILGVLAVASGCGVQAYDLPLPGKEVGEGDGYVVTAEFNDVVD-VVPRTKVMANDVPVG 61
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + H+ IR + L A +R L G YI L
Sbjct: 62 QVDKVE---REGWHAKVTMTIRKNIELPADALANVRQTSLLGEKYIALVAPEGSTVASAG 118
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + + A + + E T +
Sbjct: 119 KLGDGATIGLDRTNRNPEVEEVLGALSFLLAGGGVGQLKTISDELNTMMDGRTGDMRALL 178
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ S + + T N + I + Q + +
Sbjct: 179 GNLETTVASLNQQKGSIIKAMEQVDRLTRTLNKESTSIEAAIDSFGPALEVLRQQHADLL 238
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
++ T +E+ + L S + +A +
Sbjct: 239 KMMKALDRLGVVATRVINQSGANLTTALEELAPTLRELADAGDSLPRGLMMAASFPFPEN 298
Query: 307 STSNMRSSISAIREITD----------QRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
++ S D + + + I + + + L +
Sbjct: 299 ASGLAMGDYSNALFHMDLDLGKLVGSLTNGESPGLLPQVFQICLSYSKGCEAIQPLAKAL 358
Query: 357 NNISALK----------------ENNSLFKDAQRAMHTFRDTSEK--INRYIPSIGNNLQ 398
+++ ++ E D + +++ +N +P I L
Sbjct: 359 CDLTNMQITCSVVGKEDTAAKPGEKTPKLPDISDLLPKSSASTKTPGLNDLVPEIAEGLS 418
Query: 399 NFSQSGLNDIQNL 411
+ + +
Sbjct: 419 APTDAESPTAEPT 431
>gi|118619940|ref|YP_908272.1| MCE-family protein Mce6F [Mycobacterium ulcerans Agy99]
gi|118572050|gb|ABL06801.1| MCE-family protein Mce6F [Mycobacterium ulcerans Agy99]
Length = 412
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 49/142 (34%), Gaps = 6/142 (4%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGL + ++ ++ I L + + + + S GL + V +G+ +G++
Sbjct: 22 VGLLLTLVVSVAYLLIGVLHV--RPLASNYALTVELGQS-GGLLPNQDVALHGVQIGKVE 78
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
L + + A I + ++T + AG Y++ + E +
Sbjct: 79 SLEISRTG---VTAILRINAGVRIPVASTVRVSALSPAGEQYVDFNATSGEGPFLKNGDA 135
Query: 130 ERNQRAMITATPSGINYFISNA 151
R TP+ +
Sbjct: 136 ISQDRTTTPVTPAELLQHADGV 157
>gi|21220881|ref|NP_626660.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|10798658|emb|CAC12794.1| putative secreted protein [Streptomyces coelicolor A3(2)]
Length = 413
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V + V L S+VR N + VGRI G+ L E + I
Sbjct: 48 LPGGADLGDHPYTVTAEL-QDVLSLVPHSAVRVNDVAVGRITGIEL-GEDDWSARVTMEI 105
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE 113
+ L TA + L G Y++
Sbjct: 106 NGEVRLPADATARLEQSSLLGEKYVQ 131
>gi|313667951|ref|YP_004048235.1| paraquat-inducible protein B [Neisseria lactamica ST-640]
gi|313005413|emb|CBN86847.1| Putative paraquat-inducible protein B [Neisseria lactamica 020-06]
Length = 553
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 83/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DDRSLYYTAFFKQSVRGLTVGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTASISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + + ++
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFGKLPLDKTVAELN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+ + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSALKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRITLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 33/388 (8%), Positives = 99/388 (25%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ +S V + VG+I D + H D ++ ++ + + T
Sbjct: 177 LNVNSPVLYENFMVGQIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + + + ++ S+ +
Sbjct: 237 GSGIKLNSAPLPVLLSGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTA 296
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + + +N + + I
Sbjct: 297 FFKQSVRGLTVG---SPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + S K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTASISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQAKVADLLDKFGKLPLDKTVAELNGSLAELKSALKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRITLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 42/461 (9%), Positives = 119/461 (25%), Gaps = 38/461 (8%)
Query: 4 KNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFN 61
+ T + + ++ W+ V+ + S +G+ +++V +
Sbjct: 17 RKNNTLLSAVWLVPLIALIAGGWLWVKEIRNRG----PVVTLLMDSAEGIEVNNTVIKVL 72
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
I VGR+ + L + A + D + T + + L TL
Sbjct: 73 SIDVGRVTRIKLRDDQKG-VEVTAQLNADVSGLIRSDTQFWVVKPRIDQSGVTGLGTLLS 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
F + + I + I + R + + +
Sbjct: 132 GSYIAFTPGKSDEAKDVFQVQDIPPVTAIGQSGLRLNLIGKNDRILNVNSPVLYENFMVG 191
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ I ++ +S + S K+ A +
Sbjct: 192 QIESAHFDPSDQSVHYTIFIQSPNDKLIHSASRFWLESGINIETTGSGIKLNSAPLPVLL 251
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-------------------- 279
+ + + N + T++D R +
Sbjct: 252 SGAISFDSPKTKNSKNVKSEDSFTLYDSRSEVANLPDDRSLYYTAFFKQSVRGLTVGSPV 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L S + + + L + +R I R + ++
Sbjct: 312 EYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTA 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIP 391
N ++ + + + + L + S + + T + + +
Sbjct: 372 LNKGLTASISSNNLLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVA 431
Query: 392 SIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + ++ + +L+ + + L++ ++
Sbjct: 432 DLLDKFGKLPLDKTVAELNGSLAELKSALKSANAALSSIDK 472
>gi|226304163|ref|YP_002764121.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183278|dbj|BAH31382.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 359
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 34/315 (10%), Positives = 93/315 (29%), Gaps = 20/315 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +V + +I+ + ++ +++R D + S D + T ++V
Sbjct: 1 MTTTVKKLAV---LAAIMICAIGAVLFVTR----DEHQLTLTAEFT-STDAIFTGNTVTI 52
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+P GR+ + + + + T + A + + + IEL ++
Sbjct: 53 LGVPSGRVESVTPEG---SRVRVAMSLPSGTRIPADAQAWVLSPSVISDRTIELGPGYED 109
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ------KIIENIEK 174
+ + A +R T + ++ +D ++ +
Sbjct: 110 GEFLADGAVIPLERTHSPLTWDQLTASVNELTVALGPGADGGGIGDLIGEGAHALDGNGQ 169
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ +I S+VLA I +++ T D +++ +
Sbjct: 170 AFNDAVRSISQASSVLAGASPDISELVKNL---NTLVQLIADNQTKVDSLSNSVTVTARA 226
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ I + + + S + V ++ + +++
Sbjct: 227 FSTQREDISGALDSLTTLLGQVSALLAEHGEAVTADLGVLAQLAGAVATKQDQLREIIET 286
Query: 295 KETSAFLENIADSTS 309
T +
Sbjct: 287 APTGFENVANLVTEE 301
>gi|26246972|ref|NP_753012.1| paraquat-inducible protein B [Escherichia coli CFT073]
gi|26107372|gb|AAN79555.1|AE016758_159 Paraquat-inducible protein B [Escherichia coli CFT073]
Length = 566
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 187 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 225
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 226 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 285
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 286 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 345
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 346 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 405
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 406 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 465
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 466 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 513
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 514 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKGKKDPEPK 562
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 287 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 346
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 347 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 404
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 405 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 464
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 465 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 519
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 520 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 549
>gi|238785950|ref|ZP_04629914.1| Paraquat-inducible protein B [Yersinia bercovieri ATCC 43970]
gi|238713140|gb|EEQ05188.1| Paraquat-inducible protein B [Yersinia bercovieri ATCC 43970]
Length = 541
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 35/267 (13%), Positives = 88/267 (32%), Gaps = 13/267 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + + V F GI VG + + + +
Sbjct: 271 SIQNSLYTEHEDFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFFTDGMRQ-----RLD 325
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + + + + A +R RA + +
Sbjct: 326 NDFRIP----VLIRIEP---GRFRKDLGPDANFEQLLKTAKQRGLRASLKSGNLLTGALF 378
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + ++ + ++ +A ++ + I+++ +VT
Sbjct: 379 IDLDFYP-DAKPWKGPLEVAGYPLLPTVSGGLAQMQQKVMQTLDKINNLPLDPMLNEVTK 437
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+S+ T + SL + + ++ + Q L+ N +K + +
Sbjct: 438 TLVESQRTMRETQKTLESLTAITTSPAMKDLPQDLQKTLNELNRSMKGFQPGSPAYNKMV 497
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q +V +++ +L + K +
Sbjct: 498 GDMQRLDQVLRELQPVLRTLNEKSNAL 524
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/415 (9%), Positives = 106/415 (25%), Gaps = 44/415 (10%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 158 SEQAGQLNAGDPVLFRGYRVGSVETSTFDAKSR---------------------LMRYQL 196
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK-----ISD 160
G Y L T +A + + + M S F
Sbjct: 197 FIGAPYDSLVTTNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLELGKPI 256
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
++ + + + + ++ + ++ + + +
Sbjct: 257 TADKPEFKLFDNRSSIQNSLYTEHEDFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFF 316
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
TD + I + + + + +R + ++ +
Sbjct: 317 TDGMRQRLDNDFRIPVLIRIEPGRFRKDLGPDANFEQLLKTAKQRGLRASLKSGNLLTGA 376
Query: 281 I-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L +K + + S + + T + + + +T
Sbjct: 377 LFIDLDFYPDAKPWKGPLEVAGYPLLPTVSGGLAQMQQKVMQTLDKINNLPLDPMLNEVT 436
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
L +S + E + +++A+ +D + + + + + +++
Sbjct: 437 KTLVESQRTMRETQKTLESLTAIT-----------TSPAMKDLPQDLQKTLNELNRSMKG 485
Query: 400 FSQSGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
F Q G +V +Q + L +V+ E + +PK
Sbjct: 486 F-QPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 537
>gi|187731372|ref|YP_001880852.1| paraquat-inducible protein B [Shigella boydii CDC 3083-94]
gi|187428364|gb|ACD07638.1| paraquat-inducible protein B [Shigella boydii CDC 3083-94]
Length = 546
Score = 60.3 bits (143), Expect = 6e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 266 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 326 RQTFNDDYRIPVLIRIEPERLKMQLGENTDVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 386 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTFS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/272 (10%), Positives = 74/272 (27%), Gaps = 22/272 (8%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPD---TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
I P+ L +T G + + A
Sbjct: 327 QTFNDDYRIPVLIRIEPERLKMQLGENTDVV----EHLGELLKRGLRGSLKTGNLVTGAL 382
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + + ++ Q+++E ++K + + +T
Sbjct: 383 YVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATS 442
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ K + TT + + + + + + S + + +
Sbjct: 443 TFSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----A 497
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
N V ++ + +++ +T E +
Sbjct: 498 YNKMVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|289642556|ref|ZP_06474699.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
gi|289507644|gb|EFD28600.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
Length = 429
Score = 60.3 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 34/367 (9%), Positives = 99/367 (26%), Gaps = 9/367 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+V LF+ L + + + +D L T S V+ G+ VG+
Sbjct: 13 VTVLLFLGGSLAILLYLSTGAGVRIPLISGKEYTAVAVFKDIDNLVTASRVQIAGVQVGQ 72
Query: 68 IVGLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + K + PL+ + + L G Y++++ + ++
Sbjct: 73 VREVTRQADGM---RVKFSVDDKAAPLHEGVAVRLGERSLVGEGYLDVTDGKGKELRSGA 129
Query: 127 IATERN---QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
E + S + + + + Q+ + I L
Sbjct: 130 TIPEDGVKPSVQLGDILASLDTDTRDELGSLVRSLGQGTDGPQQDVSGILDGLGDLGREG 189
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
T +A+ + + T + D+ A Q + +L
Sbjct: 190 HTALDAIASQSEDLKALAQETSTVLRALDTGQGQIATLVSNVDQLTQATAGQQQAIEDVL 249
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE--TSAFL 301
++ +S + + + + L +
Sbjct: 250 RQAPGVLDSAKTASGTLTKLSGALAPVAADLKTASPLLTDALEQLPATSADLHGLLPPLS 309
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + + + ++ + + + + + + + + + + + N I
Sbjct: 310 GTLDLAPDTLNRVPTLGTDVRNVIPPVRTALRDVNPMLAFIKPYGPELSAFFANFNAIMQ 369
Query: 362 LKENNSL 368
+ +
Sbjct: 370 YTDESGA 376
>gi|195940401|ref|ZP_03085783.1| paraquat-inducible protein B [Escherichia coli O157:H7 str. EC4024]
Length = 436
Score = 60.3 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 57 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 95
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 96 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 155
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 156 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 215
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 216 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 275
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 276 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 335
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 336 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 383
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 384 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 432
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 157 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 216
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 217 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 274
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 275 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 334
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 335 SESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYN 389
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 390 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 419
>gi|296141839|ref|YP_003649082.1| hypothetical protein Tpau_4174 [Tsukamurella paurometabola DSM
20162]
gi|296029973|gb|ADG80743.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 367
Score = 60.3 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 14/97 (14%), Positives = 30/97 (30%), Gaps = 4/97 (4%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
++ + I + + + + L VR G+PVG + G+ L
Sbjct: 57 IASAMLAAVIIIAAGYLSLAPPGSTSYSVDMAETGQ-LRKGDDVRVAGVPVGSVSGVALR 115
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + + +TA ++ G Y
Sbjct: 116 RND---VRVTIRVDKSAFIGNQSTAAVKMLTAVGGYY 149
>gi|302768461|ref|XP_002967650.1| hypothetical protein SELMODRAFT_408827 [Selaginella moellendorffii]
gi|300164388|gb|EFJ30997.1| hypothetical protein SELMODRAFT_408827 [Selaginella moellendorffii]
Length = 387
Score = 60.3 bits (143), Expect = 7e-07, Method: Composition-based stats.
Identities = 20/260 (7%), Positives = 63/260 (24%), Gaps = 6/260 (2%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
W+ + G++ + VR G+ VG ++ + E + +
Sbjct: 120 WVKGTQLRARSRKYFATFEFAKAWGITVGTPVRIRGVDVGTVIRVKPTLEKLD-VEVQI- 177
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
+ + + + + GL T I+++ I +
Sbjct: 178 VDANLVIPRNALVEVNQSGLVSETLIDITPQHP----IPSPTVGPLHPDCKGEGLIVCDR 233
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
E + + + + E +S + + K+
Sbjct: 234 ESIRGEQGVSLDELVGICTKLAKQIDAQGVKRLYDVGERMSLAVEEAKPLLAKVQSMAGD 293
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + +A + + ++ +S + T+
Sbjct: 294 MEPLIKEIRDGGLLKEFEKLTKVAAEAGEDLRKLNSSVLTPENTELLRQSVSTLTKTLKH 353
Query: 267 VRETTQTFQEVGQKIDHLLS 286
+ ++ + +
Sbjct: 354 IESISEDISGLTGDAGTRYN 373
>gi|310767212|gb|ADP12162.1| paraquat-inducible protein B [Erwinia sp. Ejp617]
Length = 537
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/404 (8%), Positives = 90/404 (22%), Gaps = 25/404 (6%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L V F G VG + D + + + P T +R
Sbjct: 155 SEKAGQLKAGDPVLFRGYRVGSVETSAFDADKR---MMTYQLFIAAPYDRLVTTNVRFWK 211
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+GI ++ + + I + AE S +
Sbjct: 212 DSGIAVDMSASGMRVEMGSLTTLFSGGVSFDIPDGWESGTTAENKAEYRLFNDQRSIQDS 271
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ + + ++ T I +
Sbjct: 272 LYSVHKDFLLF----------FNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIVQRLN 321
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ I ++ + + + ++ + +D
Sbjct: 322 NDFRIPVLIRIEPDRFKTQLGSDFNFEQHLKDGVAVGLRASLKSANLLTGALYVDLDFYN 381
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + + A R + +N +
Sbjct: 382 NVKPASGPATFAQYSVIPTASGGLAQIQQKLMESLDKINRLPLNPLLNEAAGTLKESQRT 441
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ + + +N ++ + L D Q + + +
Sbjct: 442 LKELQKTLDNLNQLTTSQSMKELPADMQSTLRELNRSMKGFQP------------GSPAY 489
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
N + +++L + + L +V+ + G K
Sbjct: 490 NKMVGDMQRLDQVLRELQPVLKTLNNKSNALVFEAKPGQDPQPK 533
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-------QEYPNHSLAKALIRPD 90
++ SV GL + V F GI +G + + I PD
Sbjct: 279 FLLFFNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIVQRLNNDFRIPVLIRIEPD 335
>gi|127514230|ref|YP_001095427.1| hypothetical protein Shew_3302 [Shewanella loihica PV-4]
gi|126639525|gb|ABO25168.1| Mammalian cell entry related domain protein [Shewanella loihica
PV-4]
Length = 157
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 53/137 (38%), Gaps = 2/137 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VGLF++S L ++ ++ G + ++ GL S V+
Sbjct: 1 MLTRKIELLVGLFILSGLMAFLVLVFNVANVEVKPGQSHYTLYAKFTNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD E ++ + + +++ +I T GL G ++ L+
Sbjct: 61 GGVVVGRVTNISLDPEEL-VAVVELAMDNQYDQFPETSSLSILTSGLLGEQFLGLTPGFV 119
Query: 120 EKKTIFQIATERNQRAM 136
+R
Sbjct: 120 MDDIGMLKDGDRIDDTH 136
>gi|324999493|ref|ZP_08120605.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 456
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 4/91 (4%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRT 103
I L S VR G VG++ + LD + ++ + PL T T+R
Sbjct: 38 IFADASPLVVGSQVRAAGATVGKVESIELDGD---KAVVGMALDQHVLPLREDATMTVRP 94
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERNQR 134
L G Y+EL + + + A +R
Sbjct: 95 INLLGEQYVELFQGSPQSAPMPEPAVVPQER 125
>gi|319950493|ref|ZP_08024406.1| Mce family protein Mce4A [Dietzia cinnamea P4]
gi|319435852|gb|EFV91059.1| Mce family protein Mce4A [Dietzia cinnamea P4]
Length = 478
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/133 (18%), Positives = 47/133 (35%), Gaps = 8/133 (6%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ LF++ +L F +I + N+ V + L D+ V+ G+
Sbjct: 8 SKRLLAALFIIIVLAFVGTTI---AIYNRAFTDSDSVTLYTDDMAFALPNDADVKARGVL 64
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VGR+ G+ D + P L + + + + L G +++L +
Sbjct: 65 VGRVSGVEPDGD---RVQVNMEFDPAFMEQLPANVSGRLLPKTLFGERFVDLGFPDQPVG 121
Query: 123 TIFQIATERNQRA 135
T+ AT
Sbjct: 122 TLEPGATIEQDTR 134
>gi|58040454|ref|YP_192418.1| hypothetical protein GOX2026 [Gluconobacter oxydans 621H]
gi|58002868|gb|AAW61762.1| Hypothetical protein GOX2026 [Gluconobacter oxydans 621H]
Length = 318
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/313 (14%), Positives = 99/313 (31%), Gaps = 24/313 (7%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIPVGR 67
VGL V++ + ++ Q+ P ++ +P S V GL+ + + G+ G
Sbjct: 22 WVGLLVLAAIVMFSVAVVEAGFLRQWLTPEKKLHFVLPESGVAGLAIGNDIEVMGVHAGE 81
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ-GLAGITYIELSTLRKEKKTIFQ 126
I L L++ ++ + + +TA IR + +AG +YIEL +
Sbjct: 82 IRRLKLNETGRMYAEGDLDPQFANFIRQDSTAIIRHRLIVAGASYIELGRGKG------- 134
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
P +Y + A + ++ + + + + +
Sbjct: 135 -------------KPLDWDYAVLQATVEANPADVITQTVMDLRNKLVPAMNNVQLITTQV 181
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI--DLQKVNQILE 244
+ +L + + + + +I L + K + KV+ +
Sbjct: 182 NDMLTDMRKGQGTIGGLLVKDDVLDKANAALAHLDAVIADLRPIEKQAGGVMTKVDGTMA 241
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
N + ++ + +S QV TV T + + + S L
Sbjct: 242 NARAATASLRQSMPQVQQTVAHANTATAQLPALLAQAEASASSLRKLTDQLRGLWLLGGG 301
Query: 305 ADSTSNMRSSISA 317
R +
Sbjct: 302 GSKQEPSRRLPAQ 314
>gi|226361220|ref|YP_002778998.1| Mce family protein [Rhodococcus opacus B4]
gi|226239705|dbj|BAH50053.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 319
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 44/134 (32%), Gaps = 6/134 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K + +G+ V+++L F + L + D A + + +GL S V
Sbjct: 1 MTVKTSLSILGMVVIAVLSFLYMGRAGLHVARFDDVRTATLDV---PDTNGLVVGSRVLL 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G I + + H D + + + G ++ +
Sbjct: 58 RGVAIGHISDVTASAD---HIEVAWNYESDRSIPADSEFRVDNLSALGEPFLAVLPSSAS 114
Query: 121 KKTIFQIATERNQR 134
+ AT +
Sbjct: 115 GPYLEDGATVPADQ 128
>gi|323143421|ref|ZP_08078106.1| hypothetical protein HMPREF9444_00725 [Succinatimonas hippei YIT
12066]
gi|322416826|gb|EFY07475.1| hypothetical protein HMPREF9444_00725 [Succinatimonas hippei YIT
12066]
Length = 541
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/395 (9%), Positives = 106/395 (26%), Gaps = 43/395 (10%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS-TTATIRTQGLAGIT 110
L+ V + G VG ++ LD + + P T L S T I + I
Sbjct: 179 LNPGDFVTYRGFNVGNVLSSSLDLDNKRIRYVIFIADPYTKLVDSNTRFWISSGIDVSIG 238
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
++ + I + + F S +S+ + +
Sbjct: 239 TEGVNFNTESINNILRGGI-------------AFDSFSSKKGEMLAPLSEHNLFKNQNEA 285
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
I+ + + + + + +D + ++IT+
Sbjct: 286 RIDSASSGILYAVM---------------VENGLHKIKQGADVVFQGIKVGEVITAPWLE 330
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
QI I +++ + + + + +++ V +
Sbjct: 331 NIDTIFTDYKQIPILIAINAYDSSNLNKIRESLDNKLKQGKLCASAVASSFISGNNQIE- 389
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN--DSSQK 348
++ ++ + + + + + I++ N + S
Sbjct: 390 ------LRYLSDSEKAVFADNKVYRNVNVIPYLKAGSLQNEISSFINRLEQFDVEGISNN 443
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
++ + + E ++L + + N + S G + +
Sbjct: 444 VKTALASVTDAMKAFEKSNLDVNKSELIQRLTVAFTNFNETVKSYGPD-----SDTYKKL 498
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
++ L V+ P +++G +
Sbjct: 499 NATLKDLDRIVSELSLTATKIGNKPNSLIFGSDNK 533
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 59/479 (12%), Positives = 134/479 (27%), Gaps = 37/479 (7%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
ESK + S L V + + L ++ GP + + SV+ + V+
Sbjct: 19 ESKAHRFS--LVWVIPIIAFIVFVILLWNNSLNKGPQITIKMPSAESVE---EGKTLVKL 73
Query: 61 NGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI-----------RTQGLAG 108
+ + VGR+ + LD +Y + L + + L + + L
Sbjct: 74 HSVTVGRVTEIKLDDDYDSAVLTVQMAKDTEDLLNEDSLFWVVKPRVETTSISGLDTLIS 133
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+YIE+ + +K + + + + + + + R
Sbjct: 134 GSYIEMRRGKSDKMSATFSMLLDPPTDINNTKGIELILYSDGNKRLNPGDFVTYRGFNVG 193
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
I S N T+ I ++
Sbjct: 194 NVLSSSLDLDNKRIRYVIFIADPYTKLVDSNTRFWISSGIDVSIGTEGVNFNTESINNIL 253
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ A D + +S +N K+ ++ E G +D
Sbjct: 254 RGGIAFDSFSSKKGEMLAPLSEHNLFKNQNEARIDSASSGILYAVMVENGLHKIKQGADV 313
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + + I + E++ + L
Sbjct: 314 VFQGIKVGEVITAPWLENIDTIFTDYKQIPILIAINAYDSSNLNKIRESLDNKLKQGKLC 373
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRD----------TSEKINRYIPSIGNNLQ 398
+ + S + + E L + + + + I S N L+
Sbjct: 374 ASAVASSFISGNNQIELRYLSDSEKAVFADNKVYRNVNVIPYLKAGSLQNEISSFINRLE 433
Query: 399 NFSQSGL-NDIQNLVRKLQETVNHFDDCLNNFERNPQDIV------WGREKGSVKIYKP 450
F G+ N+++ + + + + F+ +N + N +++ + +VK Y P
Sbjct: 434 QFDVEGISNNVKTALASVTDAMKAFEK--SNLDVNKSELIQRLTVAFTNFNETVKSYGP 490
>gi|296138971|ref|YP_003646214.1| hypothetical protein Tpau_1244 [Tsukamurella paurometabola DSM
20162]
gi|296027105|gb|ADG77875.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 384
Score = 59.9 bits (142), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/329 (10%), Positives = 98/329 (29%), Gaps = 4/329 (1%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
+ + + I W++++ + +R P G+ + VR G+ VG + G+
Sbjct: 21 LIAAAVILVIALIVWIAQA-VWPKDEFSFTLRTPTVAAGIVNGAPVRIQGVQVGEVTGVK 79
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + A L G++ + T R + AT
Sbjct: 80 AVSSGQQGVTVTMKSADGKSLTNNVEAAFSAGNLFGVS-EVILTPRDGGGELKDGATISP 138
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + T S + I + N + + + S+ + + T +
Sbjct: 139 TKQITDNTVSNMIVTIGDVNNDALRPNMSTILLNFDASSKAMLPLFTALGNVAQAVQDTQ 198
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
++ T + + + + + + + L+ I ++
Sbjct: 199 RLTTAQTFPVITDTLMGADSAIAQIIPSVRTLFNYAPVHDKGWVNRGAATLDAITNQKDS 258
Query: 253 FVKSSDQVINTVH--DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
+ ++++ + T + Q + + + S+ + L+N+ + N
Sbjct: 259 LSAALQKLLDAKALKGLETATPMLVNLMQPLLNAFPNGSATGVGIQIGQLLDNVRKAMPN 318
Query: 311 MRSSISAIREITDQRQKIISTINTIENIT 339
+ ++ I + + T
Sbjct: 319 TPNGPVLNVRLSVDFPAIAAGLPPAPTFT 347
>gi|296139952|ref|YP_003647195.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
gi|296028086|gb|ADG78856.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
Length = 363
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/113 (17%), Positives = 39/113 (34%), Gaps = 3/113 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
L V +++ + I S + + + VR G+ VG+I G+
Sbjct: 11 LIVFAVVTATATGILGASIAQLNFSFGRDYHAIFSD-ATMVQKGDEVRIAGVRVGQITGV 69
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+ + + + S TA +R + L G Y+EL + +
Sbjct: 70 AIH--DRGQADVAFNLSDRDSIPGSATAALRLRNLVGQRYLELMQAPTDNDPV 120
>gi|86133693|ref|ZP_01052275.1| ABC transporter, periplasmic binding protein [Polaribacter sp.
MED152]
gi|85820556|gb|EAQ41703.1| ABC transporter, periplasmic binding protein [Polaribacter sp.
MED152]
Length = 322
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 3/88 (3%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD--QEYP 78
+ +L + DG E + + GL+ SSV NG+ VG++ + + +E
Sbjct: 18 FVWGFNFLKGHDLLDGKAREFQVEYTK-IGGLNRASSVTLNGLKVGQVKDIAFNTTEEKR 76
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGL 106
+ + D ++ I +
Sbjct: 77 GQLIVTFAVENDFQFSKNSVVKIYSPNP 104
>gi|167625601|ref|YP_001675895.1| hypothetical protein Shal_3696 [Shewanella halifaxensis HAW-EB4]
gi|167355623|gb|ABZ78236.1| Mammalian cell entry related domain protein [Shewanella
halifaxensis HAW-EB4]
Length = 156
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 49/120 (40%), Gaps = 2/120 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VGLF++S L ++ ++ G + + ++ GL S V+
Sbjct: 1 MLTRKIEILVGLFLLSGLTAFLVLVFNVANVEVKSGDSSYTLHAKFNNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD E + ++T +I T GL G ++ L+
Sbjct: 61 GGVVVGRVSAITLDPEKLVPV-VTIAMDKRYQHFPETSTLSILTSGLLGEQFLGLTPGFM 119
>gi|118471128|ref|YP_885542.1| mce related protein [Mycobacterium smegmatis str. MC2 155]
gi|118172415|gb|ABK73311.1| mce related protein [Mycobacterium smegmatis str. MC2 155]
Length = 418
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 6/105 (5%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+GL + ++ ++ L + N D + +++P S GL D V G+P+GR+
Sbjct: 26 LGLVMTLVVATAYLFFGAL-QVNPLDSD-YGLTVQLPESA-GLLPDQDVTLRGVPIGRVE 82
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
L + A ++ + ++ + AG YI+
Sbjct: 83 RLDITPSG---VNAIVKVKSTVRIPEASDVRVSGLSPAGEQYIDF 124
>gi|91788520|ref|YP_549472.1| ABC-type transport system periplasmic component [Polaromonas sp.
JS666]
gi|91697745|gb|ABE44574.1| ABC-type transport system periplasmic component [Polaromonas sp.
JS666]
Length = 346
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/286 (9%), Positives = 76/286 (26%), Gaps = 10/286 (3%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY 77
+ + + + + + ++ I +G+ + F+G P+GR+ + L ++
Sbjct: 57 VCGAAMYVLYARGA----FETTQRLVLISDDSEGVVVGMDLTFSGFPIGRVRRIELAEDG 112
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
L + L ++ T+ + G R + +
Sbjct: 113 KARILVDVASKDAHWLRTTSVFTLVRGIVGGTNI------RAYTGLLKDPPLPDGAVRTV 166
Query: 138 TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI 197
+ A + ++ T+ +
Sbjct: 167 LQGDASAEVPKVIAAAKDLIENLNTLTGSTGAVGASMANLQTLTERLNGPGGALTVMLGS 226
Query: 198 DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSS 257
+ + T +++ T T + + + + S
Sbjct: 227 EAEANKLLATLDRTNALLTKLDAIAAKTDTQVFGANGVMPETRATIVQLNTMLGEARTSL 286
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+V + D + T +E + L +D + ++ ++ N
Sbjct: 287 KKVDALLQDAQAVTSNAKEATADLGALRADVEASLRKVDSLVNEIN 332
>gi|302525566|ref|ZP_07277908.1| MCE family protein [Streptomyces sp. AA4]
gi|302434461|gb|EFL06277.1| MCE family protein [Streptomyces sp. AA4]
Length = 384
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 34/275 (12%), Positives = 78/275 (28%), Gaps = 5/275 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V V L ++V+ N + VGRI + L + +L +
Sbjct: 18 LPGGPDVGDHPYHVTALFTD-VLDLVPQANVKVNDVAVGRIDRIALTPDT-RSALVSMTV 75
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK--TIFQIATERNQRAMITATPSGIN 145
D L + A +R L G +++LS EK + A R
Sbjct: 76 NGDVQLPANARAELRQSSLLGEKFVQLSAPTAEKPAGRLADGAQIPLGRTNRNP-EIEEV 134
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + ++ + + A + + + H +++
Sbjct: 135 LGALSLLLNGGGVDQLQNISHELNDALSGNEPQMRALLSRVDELATQLDGHKGEILRAID 194
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + I + +Q++ + + + D V +
Sbjct: 195 GLDKLSATLVGQKQNLATALDKLAPGLKIVADQRDQLVGMLNALNKLSGVAVDTVNRSRD 254
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+ + + +++ D + ++ T F
Sbjct: 255 QLVANLKALEPTLRQLSAAGQDLPNALRILLTYPF 289
>gi|319638669|ref|ZP_07993429.1| PqiB protein [Neisseria mucosa C102]
gi|317400053|gb|EFV80714.1| PqiB protein [Neisseria mucosa C102]
Length = 553
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 33/276 (11%), Positives = 85/276 (30%), Gaps = 24/276 (8%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQEY------PNHSLAKALI 87
D SV GL+ S V + G+ VG + + + D+ + I
Sbjct: 288 DNRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRI 347
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P + ++ K FQ A + A I++
Sbjct: 348 EPSR-----------------LEINADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSK 390
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + H + + + +++ L + +++ +
Sbjct: 391 MIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDKTVAGLN 450
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
++ K+T + ++S+DK++ Q + L ++ DV
Sbjct: 451 GSLAELKSTLKSANAALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQSPIYGDV 510
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ T Q+ + + + +++ K + ++ ++
Sbjct: 511 QNTLQSLDKTLKDVQPVINTLKEKPNALIFNSSSKD 546
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/388 (7%), Positives = 92/388 (23%), Gaps = 25/388 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S + + VG++ D + H D + + + T
Sbjct: 177 LNASSPILYENFMVGQVESAHFDPSDQSVHYTIFIQSPNDKLINSESRFWLENGINIETT 236
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A + S + + ++ + +
Sbjct: 237 GSGVKLNSAPLPALLSGAISFDSPKTKN---SKNVKSEDSFTLYDSRSEVANLPDNRSLY 293
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + +N + + I
Sbjct: 294 YTAFFKQSVRGLTAGSPVEYKGLNVGVVSDVPYFDRNDSLHLFENGWIPVRIRIEPSRLE 353
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I A + K + + + + K+
Sbjct: 354 INADEQSKEHWKQQFQTALNKGLTATISSNNLLTGSKMIELNDQPSASPKLR-------- 405
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + A + T+ + + L + +
Sbjct: 406 -PHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDKTVAGLNGSLAELKSTLKSAN 464
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+S I+ + + ++ + + + R T + ++ D+QN
Sbjct: 465 AALSSIDKLVGKPQTQNIPNELNQTLKELRQTLQGVSPQ------------SPIYGDVQN 512
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L +T+ +N + P +++
Sbjct: 513 TLQSLDKTLKDVQPVINTLKEKPNALIF 540
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/448 (9%), Positives = 120/448 (26%), Gaps = 34/448 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFL 73
+ L + L + + GP+ +++ S +G+ +++V + + VGR+ + L
Sbjct: 28 LIPLIALIAGGWLLVKDIRNRGPVVTLLM---DSAEGIEVNNTVIKVLNVDVGRVTRIKL 84
Query: 74 DQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+ A+ + T + + L TL F +
Sbjct: 85 RDDQKGVEVTAQLSADAKDLIRSDTQFWVVKPRIDQSGVTGLGTLLSGSYIAFTPGKSQE 144
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + I + I + R + + + +
Sbjct: 145 TKDVFVVQDIPPIAAIGQSGLRLNLIGKNDRILNASSPILYENFMVGQVESAHFDPSDQS 204
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
I ++ S + S K+ A ++ + + N
Sbjct: 205 VHYTIFIQSPNDKLINSESRFWLENGINIETTGSGVKLNSAPLPALLSGAISFDSPKTKN 264
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQ--------------------KIDHLLSDFSSKM 292
+ T++D R + + L S +
Sbjct: 265 SKNVKSEDSFTLYDSRSEVANLPDNRSLYYTAFFKQSVRGLTAGSPVEYKGLNVGVVSDV 324
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + L + +R I R + ++ N ++ +
Sbjct: 325 PYFDRNDSLHLFENGWIPVRIRIEPSRLEINADEQSKEHWKQQFQTALNKGLTATISSNN 384
Query: 353 MSKINNISALKENNSLFKDAQ--------RAMHTFRDTSEKINRYIPSIGNNLQNF-SQS 403
+ + + L + S + + T + + + + + N
Sbjct: 385 LLTGSKMIELNDQPSASPKLRPHTVYAGDTVIATQGGGLDDLQAKVADLLDKFNNLPLDK 444
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + + +L+ T+ + L++ ++
Sbjct: 445 TVAGLNGSLAELKSTLKSANAALSSIDK 472
>gi|169628785|ref|YP_001702434.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169240752|emb|CAM61780.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 502
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/289 (8%), Positives = 73/289 (25%), Gaps = 4/289 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ G + + + + +S VI + DGL S V++
Sbjct: 17 SRRQLLVRGGAALALVAVLTAGLLI---KSTGVLDRYVNVIADLHNVGDGLPPRSDVKYR 73
Query: 62 GIPVGRIVGLFL-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG + G+ PN + + + TA + + ++ ++L
Sbjct: 74 GVLVGAVDGVTPSAGTQPNRVRVRLKPMYARSIPATVTARVVPSNVFAVSALQLVDHGPG 133
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ R + +N + D++ I + +
Sbjct: 134 APIREGGHIAEDTRLPTVLFQTTVNKLRQILTAAGRGREDNTVGILAAVGAATNHRRAEL 193
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + ++ I + + + +
Sbjct: 194 LTSAAQLDRMLDQLNAIVATDQGPSTVSALVQAAHGLSQTAPDLVDALHQAVRPMQTLAE 253
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + + V + + + Q ++ + L +
Sbjct: 254 KREQLRTFIGAGVQTTGTTVRSLHNHTDQLIQITTDLTPVLGVLADNAQ 302
>gi|54022506|ref|YP_116748.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014014|dbj|BAD55384.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 354
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/254 (9%), Positives = 70/254 (27%), Gaps = 6/254 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
GL +V+ G+ GR+ + L + L + + L T+A I
Sbjct: 41 YTAYFADAGGLVPGDNVQVAGVRSGRVDEVELAGD---KVLVRFTLDESIVLGDKTSAAI 97
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+T + G +E+ + + + + K+ +
Sbjct: 98 KTNTVLGRKSLEVVPAGAGALRRADTIPLERTTSPYSLNDALGELATTVDGLDMDKVDQT 157
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ + PL + + +S + + + +++ Q ++
Sbjct: 158 LDALSATFADTPAPLRAALDGVTELSRTINSRDQALSQLLERAQNVTKILSDRSAQINAL 217
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
L + + Q++ ++ + V + ++ V +
Sbjct: 218 LLDGNQLLGELDARRTAIGQLIVHVNGLAQQL---RGLVADNEAQLQPALDRLNSVLDVL 274
Query: 282 DHLLSDFSSKMKSK 295
+ + +
Sbjct: 275 QRNRQNITEALDGL 288
>gi|120401165|ref|YP_950994.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119953983|gb|ABM10988.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 544
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/297 (9%), Positives = 71/297 (23%), Gaps = 5/297 (1%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V+ ++ + V+ G+ VG I + + +
Sbjct: 46 TKTVVAYFTQTLA-IYPGDKVQIMGVQVGSIDKIEPAGD---KMKVTFHYAGKYKVPQDA 101
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIAT-ERNQRAMITATPSGINYFISNAENTSK 156
TA+I L I+LS + A + ++ + + +
Sbjct: 102 TASILNPSLVASRTIQLSPPYTGGPVLADGAVLDVDRTQVPVEYDDVRDSISRLLTDLGP 161
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
IIE+ + L+ + +++ S
Sbjct: 162 TPEQPKGPFGDIIESAADGFAGKGEQLNKTLNNLSEALFALNEGRGDFFSVVKSLALFVN 221
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+D A + + + + N V + E +
Sbjct: 222 ALHQSDQQFVALNNNLAQFTNAFTDTDREVADALRDLNELLTTTRNFVDENGEVLAHDVQ 281
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ + + + + N+A + N+ S + + +
Sbjct: 282 NLADVTNAILQPEPRDGLETALHAYPNVAANLMNISSPNAGGIVTMPVISNFANPMQ 338
>gi|256376291|ref|YP_003099951.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
gi|255920594|gb|ACU36105.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
Length = 334
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 43/121 (35%), Gaps = 8/121 (6%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+ ++ +++W+ R S G+ +S VR G+ VGR++ +
Sbjct: 17 VMVLVLLVATAVWWV----FLQPQGIRFTARF-ASAVGVHPESDVRVLGVRVGRVLSVVP 71
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+++ + + A + + Y++L+ + + A +
Sbjct: 72 ERDS---VRVEVELDHGVRAPADVRAAVVAPSVVADRYLQLAPAYTGGEPLAAGAVVPLE 128
Query: 134 R 134
R
Sbjct: 129 R 129
>gi|170769428|ref|ZP_02903881.1| mce-related protein [Escherichia albertii TW07627]
gi|170121752|gb|EDS90683.1| mce-related protein [Escherichia albertii TW07627]
Length = 879
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----GSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDVRLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 40.7 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 24/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLLESEPKEWRE 872
>gi|111023087|ref|YP_706059.1| hypothetical protein RHA1_ro06124 [Rhodococcus jostii RHA1]
gi|110822617|gb|ABG97901.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
Length = 363
Score = 59.9 bits (142), Expect = 8e-07, Method: Composition-based stats.
Identities = 32/315 (10%), Positives = 86/315 (27%), Gaps = 11/315 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ V+ V+G+ + V G+PVG + + + + D L
Sbjct: 30 IFRTSSTVVHSEFAYVNGVFPGTKVSVLGVPVGTVEAVEP---RGATVMVTMSVASDIVL 86
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA-- 151
A + G ++EL T +R+ T + +
Sbjct: 87 PADANAYVLVTSAIGERFVELGPAYTGGPVFESGQTIPPERSHSPITWDQLMDSVDTVVK 146
Query: 152 ------ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ IS ++ + + + T I+ A+ + +D +
Sbjct: 147 ALGPDGGDAGAAISAAAASTDGLGPAMNDAIRTLSQASSVIAGNSADVGALVDNLEVLVN 206
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
++ I + V Q+ + V +
Sbjct: 207 AISSRQAQVDSLAGSLTAIGDEFAGRQFAIDDTVTQLSTLLDQIDQLVSARGGDVTAGID 266
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
++ ++ Q + ++ + + + + A N+ ++++ +
Sbjct: 267 NLAGVSEVLQRHDTDLAEIMDLVPLLIDNIQRVVTPDQRARIRLNISTNLAQAEPTSPLC 326
Query: 326 QKIISTINTIENITS 340
+ + IT+
Sbjct: 327 AVVDPILCRGAGITN 341
>gi|332093549|gb|EGI98607.1| paraquat-inducible protein B [Shigella boydii 3594-74]
Length = 502
Score = 59.9 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/411 (10%), Positives = 91/411 (22%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 123 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 161
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 162 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 221
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 222 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 281
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ--------K 280
+ D + I + +++D V + ++ + + G
Sbjct: 282 RQTFNDDYRIPVLIRIEPERLKMQLGENTDVVEHLGELLKRGLRGSLKTGNLVTGALYVD 341
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+D + + + + + + I + S
Sbjct: 342 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 401
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 402 ESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQP------------ 449
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 450 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 498
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/272 (10%), Positives = 74/272 (27%), Gaps = 22/272 (8%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 223 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 282
Query: 74 -DQEYPNHSLAKALIRPD---TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
I P+ L +T G + + A
Sbjct: 283 QTFNDDYRIPVLIRIEPERLKMQLGENTDVV----EHLGELLKRGLRGSLKTGNLVTGAL 338
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + + ++ Q+++E ++K + + +T
Sbjct: 339 YVDLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATS 398
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ K + TT + + + + + + S + + +
Sbjct: 399 TLSESQRTMKNLQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----A 453
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
N V ++ + +++ +T E +
Sbjct: 454 YNKMVADMQRLDQVLRELQPVLKTLNEKSNAL 485
>gi|120404936|ref|YP_954765.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957754|gb|ABM14759.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 458
Score = 59.9 bits (142), Expect = 9e-07, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 38/124 (30%), Gaps = 6/124 (4%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL 71
+ ++ + F + N + + GL T + V+ G+ VGR+ +
Sbjct: 17 AILLVMVAVFLVVTAGVYNGRFRAYVP--VSLTSDRSGLVMETGAKVKLRGVEVGRVKNI 74
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATE 130
+ P + + A I+ G +++ + + A
Sbjct: 75 S-GGDGPARLELAIYPDQIQFIPANVQAQIQATTAFGAKFVDLVYPADPSPDRLAAGAVL 133
Query: 131 RNQR 134
R+
Sbjct: 134 RSTN 137
>gi|326330423|ref|ZP_08196731.1| putative oxidoreductase [Nocardioidaceae bacterium Broad-1]
gi|325951698|gb|EGD43730.1| putative oxidoreductase [Nocardioidaceae bacterium Broad-1]
Length = 432
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 42/368 (11%), Positives = 107/368 (29%), Gaps = 13/368 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQ---YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
V L V + I + + D + IP VD L S V+ G+ V
Sbjct: 13 MVTLAVFFGVCAIIMFILYSGTGAKRPVLDSEEYTATVVIPD-VDNLVQASQVQIAGVKV 71
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
G++ + + + + + PL+ + + L G +Y+ L+ + +
Sbjct: 72 GQVRSVEV---SDKGAEVVFALDDEYAPLHEGAELRVAERSLVGESYLALTPGKGTEIPS 128
Query: 125 F---QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
R + S + + + + + ++ + L
Sbjct: 129 GAELPAGVVRPSVQLRDVLASLDEESRGDMRELLRSLGAGTSGAEGDLDTLMTGLGDLGR 188
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T +A +DK+ T + D+ + A +
Sbjct: 189 EGHTALDAIAAQSEDLDKLARQTSQVLQALDTGEGQIADLVDNANQVTGATAGQRGAIEA 248
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK--ETSA 299
L + +SD +++ + + + G + L + + K
Sbjct: 249 TLREAPETLAATQTASDSLVSLSVALGPVAKDLRAAGPGLTTALGELPATTKDLRGMLEP 308
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
+ + + + + ++ +T+ + + S + + A + N +
Sbjct: 309 LSGVLDQAPATLDRVPTFSNDVRATIPTAQATLADVNPMLSYIKPYGPELAAYFANFNAV 368
Query: 360 SALKENNS 367
++ N
Sbjct: 369 LNYRDENG 376
>gi|320015712|gb|ADV99283.1| paraquat-inducible protein B [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 550
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 36/412 (8%), Positives = 100/412 (24%), Gaps = 38/412 (9%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 167 SDQAGQLNAGDPVLFRGYRVGSVETSTFDPQSR---------------------LMRYQL 205
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK-----ISD 160
G Y + T +A + + + M S F
Sbjct: 206 FIGAPYDSMVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPV 265
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + + ++ + ++ + + +
Sbjct: 266 TQDKAEFKLFDDRSSIQNSLYIEHENFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFF 325
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + I + + + +R + ++ +
Sbjct: 326 AEGMKQQVDNDFRIPVLIRIEPGRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTG- 384
Query: 281 IDHLLSDFSSKMKS-KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
L D + + ++ I++ Q I+ + +
Sbjct: 385 --ALFVDLDFYPDAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNP-MV 441
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + + + + M + + A + + Q + T ++NR +
Sbjct: 442 NEVTKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKTLNELNRSMKGFQP---- 497
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + +++L + + L +V+ E + +PK
Sbjct: 498 -GSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 546
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 78/283 (27%), Gaps = 23/283 (8%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ SV GL + + V F GI VG + + E + D +
Sbjct: 288 EHENFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFFAEGMKQ-----QVDNDFRIP-- 340
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
IR + + + + + + A ER RA + + + +
Sbjct: 341 --VLIRIEP---GRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLDFYP- 394
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ TIS LA + + + P +
Sbjct: 395 ----------DAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNPMVNEV 444
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + ++ + K + +++Q + K+ +++ ++ + + + +
Sbjct: 445 TKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKTLNELNRSMKGFQPGSPAYNK 504
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + L T N + +
Sbjct: 505 MVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKK 547
>gi|238757823|ref|ZP_04619006.1| hypothetical protein yaldo0001_35820 [Yersinia aldovae ATCC 35236]
gi|238704066|gb|EEP96600.1| hypothetical protein yaldo0001_35820 [Yersinia aldovae ATCC 35236]
Length = 852
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 46/418 (11%), Positives = 106/418 (25%), Gaps = 12/418 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + IY N + EV I S G+ + VR+ G+ VG + + L
Sbjct: 4 FIALLIAGWLIY-----NNWQERGTEVTIDF-QSAAGIVAGRTPVRYQGVEVGIVQSINL 57
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
D + + A I+ D L T + T + L L +
Sbjct: 58 D-DDLRNIKVTASIKNDMEDSLREGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGEGK 116
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+Q + D + K + +
Sbjct: 117 SQSHFTALDTQPKFRLNTGELMVHLHAPDLGSLNNGSLVYYRKIPVGKVYDYNIAPDNNG 176
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
I + V + + + ++++ I + S
Sbjct: 177 VVIDVLIDRRFAKLVKNDTRFWNVSGFKGDFSLNGATVQMESLAALVNGAIAFDSPPGSQ 236
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
N + + + L + + + L + +
Sbjct: 237 NAKPDHPFQLYPDLAHSQRGVAITLDLPSGNSLNAGRTPLIYQGLQVGTLTKMTLQPDSK 296
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF--AELMSKINNISALKENNSLF 369
+ + + + I S + + + I +++ ++
Sbjct: 297 VTGELTLDPSVVDLMRTGTRIEMNSPRISLNDAKLSELLTGNTLELIPGEGEPQQHFTIL 356
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
++ + + ++ + Q S G+ Q L R+L T +F +
Sbjct: 357 PSSKSLLQQPNVLTLQLTAPQSYGIDVGQPISLHGVKIGQVLTRELTATGVNFSVAIE 414
Score = 43.4 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 22/115 (19%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + ++ + +
Sbjct: 731 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSIRISQKFQQLVRQNSVFWLASGYN 789
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P K +
Sbjct: 790 LEFGLTGGVVKSGTFQQFIRGGIAFATPPTTPLAPKASVNQHFLLNPEEPKDWRN 844
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+II L+ +R+ GI +G++ L L E
Sbjct: 610 LIILRTFDASKLAAGMPIRYLGINIGQVESLKLAPERNEV 649
>gi|332161569|ref|YP_004298146.1| hypothetical protein YE105_C1947 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665799|gb|ADZ42443.1| hypothetical protein YE105_C1947 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
Length = 876
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y N + EV I S G+ + VR+ G+ VG + + L
Sbjct: 28 FIALLIAGWLVY-----NNWQERGTEVTIDF-QSAAGIVAGRTPVRYQGVEVGMVQSISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
D + + A I+ D L T + T
Sbjct: 82 D-DDLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 43.8 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 21/115 (18%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + ++ + +
Sbjct: 755 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKYQQLVRQNSVFWLASGYN 813
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P K
Sbjct: 814 LEFGLTGGVVKSGTFQQFIRGGIAFATPPTTPLAPKASVNQHFLLNPQEPKDWRD 868
Score = 39.9 bits (90), Expect = 0.89, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +R+ GI +G++ L L E
Sbjct: 641 DASKLAAGMPIRYLGINIGQVESLKLAPERNEV 673
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
+ L+ S V + IPVG++ + + + R + +T +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYNIAPDNNGVVIDVLIDRRFAKLVKNNTRFWNVSGFK 228
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
+ S + + A +
Sbjct: 229 GDFSLNGASVQMESLAALVNGAIAFDSPPNSQN 261
>gi|123442144|ref|YP_001008377.1| hypothetical protein YE1864 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122089105|emb|CAL11943.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 876
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y N + EV I S G+ + VR+ G+ VG + + L
Sbjct: 28 FIALLIAGWLVY-----NNWQERGTEVTIDF-QSAAGIVAGRTPVRYQGVEVGMVQSISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
D + + A I+ D L T + T
Sbjct: 82 D-DDLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 43.8 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 21/115 (18%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + ++ + +
Sbjct: 755 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKYQQLVRQNSVFWLASGYN 813
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P K
Sbjct: 814 LEFGLTGGVVKSGTFQQFIRGGIAFATPPTTPLAPKASVNQHFLLNPQEPKDWRD 868
Score = 39.9 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +R+ GI +G++ L L E
Sbjct: 641 DASKLAAGMPIRYLGINIGQVESLKLAPERNEV 673
>gi|259908888|ref|YP_002649244.1| paraquat-inducible protein B [Erwinia pyrifoliae Ep1/96]
gi|224964510|emb|CAX56020.1| Paraquat-inducible protein B [Erwinia pyrifoliae Ep1/96]
Length = 536
Score = 59.6 bits (141), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/404 (8%), Positives = 90/404 (22%), Gaps = 25/404 (6%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L V F G VG + D + + + P T +R
Sbjct: 155 SEKAGQLKAGDPVLFRGYRVGSVETSAFDADKR---MMTYQLFIAAPYDRLVTTNVRFWK 211
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+GI ++ + + I + AE S +
Sbjct: 212 DSGIAVDMSASGMRVEMGSLTTLFSGGVSFDIPDGWESGTTAENKAEYRLFNDQRSIQDS 271
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ + + ++ T I +
Sbjct: 272 LYSVHKDFLLF----------FNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIVQRLN 321
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ I ++ + + + ++ + +D
Sbjct: 322 NDFRIPVLIRIEPDRFKTQLGSDFNFEQHLKDGVAVGLRASLKSANLLTGALYVDLDFYN 381
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + + A R + +N +
Sbjct: 382 NVKPASGPATFAQYSVIPTASGGLAQIQQKLMESLDKINRLPLNPLLNEAAGTLKESQRT 441
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ + + +N ++ + L D Q + + +
Sbjct: 442 LKELQKTLDNLNQLTTSQSMKELPADMQSTLRELNRSMKGFQP------------GSPVY 489
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
N + +++L + + L +V+ + G K
Sbjct: 490 NKMVGDMQRLDQVLRELQPVLKTLNNKSNALVFEAKPGQDPQPK 533
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-------QEYPNHSLAKALIRPD 90
++ SV GL + V F GI +G + + I PD
Sbjct: 279 FLLFFNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIVQRLNNDFRIPVLIRIEPD 335
>gi|283784771|ref|YP_003364636.1| paraquat-inducible protein B [Citrobacter rodentium ICC168]
gi|282948225|emb|CBG87792.1| paraquat-inducible protein B [Citrobacter rodentium ICC168]
Length = 546
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 91/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDAQKR-----TISYQLFINAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + ++T E SS +
Sbjct: 222 SGIAVDLTSAGMRVEMGSLSTLFGG--------GVSFDVPEGLELGQPVAEKSSFSLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSIRGLQPGAPLEFRGIRLGTVSKVPFFVPNMRQVFNNDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGEETDVGAHLADLLKRGLRGSLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + I N S + ++
Sbjct: 394 PISGIREFNGYQIIPTVSGGLAQIQQRLMDALDKINNLPLNPMIQQATNTLSESQRTMKR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N +++ + L D Q + + + + N +
Sbjct: 454 LQTTLDNVNALTSSQSMQQLPADMQNTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/260 (9%), Positives = 70/260 (26%), Gaps = 13/260 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHS 81
S + + ++ S+ GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSIRGLQPGAPLEFRGIRLGTVSKVPFFVPNMRQVFNNDYRI 335
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I P+ L + + A + P
Sbjct: 336 PVLVRIEPE-RLKAQLGEETDVGAHLADLLKRGLRGSLKTGNLVTGALYVDLDFYPKEPP 394
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ + ++ Q++++ ++K + + +T + K +
Sbjct: 395 ISGIREFNGYQIIPTVSGGLAQIQQRLMDALDKINNLPLNPMIQQATNTLSESQRTMKRL 454
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
TT ++ S + + + + + + + N V ++
Sbjct: 455 QTTLDNVNALTSSQSMQQLPADMQNTLRELNRSMQGFQPGSA-----AYNKMVADMQRLD 509
Query: 262 NTVHDVRETTQTFQEVGQKI 281
+ +++ +T E +
Sbjct: 510 QVLRELQPVLKTLNEKSNAL 529
>gi|318605948|emb|CBY27446.1| paraquat-inducible protein B [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 876
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y N + EV I S G+ + VR+ G+ VG + + L
Sbjct: 28 FIALLIAGWLVY-----NNWQERGTEVTIDF-QSAAGIVAGRTPVRYQGVEVGMVQSISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
D + + A I+ D L T + T
Sbjct: 82 D-DDLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 43.8 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 21/115 (18%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + ++ + +
Sbjct: 755 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKYQQLVRQNSVFWLASGYN 813
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P K
Sbjct: 814 LEFGLTGGVVKSGTFQQFIRGGIAFATPPTTPLAPKASVNQHFLLNPQEPKDWRD 868
Score = 39.9 bits (90), Expect = 0.92, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +R+ GI +G++ L L E
Sbjct: 641 DASKLAAGMPIRYLGINIGQVESLKLAPERNEV 673
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
+ L+ S V + IPVG++ + + + R + +T +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYNIAPDNNGVVIDVLIDRRFAKLVKNNTRFWNVSGFK 228
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
+ S + + A +
Sbjct: 229 GDFSLNGASVQMESLAALVNGAIAFDSPPNSQN 261
>gi|91211056|ref|YP_541042.1| hypothetical protein UTI89_C2035 [Escherichia coli UTI89]
gi|237705786|ref|ZP_04536267.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|91072630|gb|ABE07511.1| hypothetical protein YebT [Escherichia coli UTI89]
gi|226900543|gb|EEH86802.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
Length = 891
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 31 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 82
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 83 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 127
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 771 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 829
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 830 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 884
>gi|294816017|ref|ZP_06774660.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|326444359|ref|ZP_08219093.1| putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
gi|294328616|gb|EFG10259.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 400
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/263 (8%), Positives = 68/263 (25%), Gaps = 13/263 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V G+ S VR G+ G + + + L+ +
Sbjct: 62 RATRVTAYFTR-ATGVYEGSDVRILGVRAGTVDAVEPVGD---RVRVTLLVDDGIEVPRD 117
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A + + Y++L+ + A +R + P ++ ++ +
Sbjct: 118 AHAVVVAPSVVADRYVQLAPAYTGGPRLTDGAVLPAERNAL---PMEVDQLYASLTELTT 174
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + + + + + + + + SS T
Sbjct: 175 ALGPEGANADGALTRLLAVGAENLDGNGRAIGDSIDQFARAARTL------DRSSGDLFT 228
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
T++ + ++ Q+ +++ S + +R +E
Sbjct: 229 TLEHLQTFTAMLQRNDRTVVRAERQLAAVTGFLADDKENLSAALRELGTALRLVKSFIEE 288
Query: 277 VGQKIDHLLSDFSSKMKSKETSA 299
+ + D ++
Sbjct: 289 NRDGLRESVDDLVPLTRALVDQR 311
>gi|308369323|ref|ZP_07417340.2| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu002]
gi|308378566|ref|ZP_07483022.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu009]
gi|308380915|ref|ZP_07491472.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu011]
gi|308328031|gb|EFP16882.1| MCE-family protein mce1A [Mycobacterium tuberculosis SUMu002]
gi|308352199|gb|EFP41050.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu009]
gi|308360103|gb|EFP48954.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu011]
Length = 443
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 40/106 (37%), Gaps = 9/106 (8%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRI 68
GL +V + +Y + P ++ + GL S V +NG+ +GR+
Sbjct: 8 GLGLVLVFALVVALVYL--QFRGEFTPKTQLTMLSAR--AGLVMDPGSKVTYNGVEIGRV 63
Query: 69 VGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ + ++ + + + P + + A I+ + G Y
Sbjct: 64 DTISEVTRDGESAAKFILDVDPRYIHLIPANVNADIKATTVFGGKY 109
>gi|50121456|ref|YP_050623.1| paraquat-inducible protein B [Pectobacterium atrosepticum SCRI1043]
gi|49611982|emb|CAG75431.1| paraquat-inducible protein B [Pectobacterium atrosepticum SCRI1043]
Length = 546
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/410 (9%), Positives = 101/410 (24%), Gaps = 26/410 (6%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ + + G L+ V F G VG + D + + + P T+
Sbjct: 159 IRVILDSDQSGQLNAGDPVLFRGYRVGSVETSEFDPKAR---KMRYQLFISAPYDGLVTS 215
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+R +G+ + + + + I A + + A+
Sbjct: 216 NVRFWKDSGVAFDMSAQGMRVEMGSLTTLFSGGVSFDIPAGWELGDAAKAMAQYRLFDSQ 275
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
S + + + + + + +
Sbjct: 276 RSIQDSLYTEYKEYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPFFPKNMKQELDGDYR 335
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
I LI + + Q S S + + + +
Sbjct: 336 IPVLIRIEPDRFEKKIGGSFDFEQHLKQAQSLGLRASMKSANLLTGALYIDLDFYPK--E 393
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
K+D L L I + +++ + +N
Sbjct: 394 KVDKALFVMDGYPVLPTIDGGLSQIQQKLMAVLDKVNS--------LPLNPMVNEATKTL 445
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + ++ + ++ +N +++ K L +D Q+ + + +
Sbjct: 446 TESQATLREMQKTLATLNKLTSSKAMQDLPEDMQKTLLELNRSMKGFQP----------- 494
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
N + +++L + + L +V+ K
Sbjct: 495 -GSPAYNKMVADMQRLDQVLRELQPVLRTLNEKSNALVFEASGSQDPQPK 543
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 80/291 (27%), Gaps = 23/291 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + E ++ S+ GL + V F GI +G + + +
Sbjct: 277 SIQDSLYTEYKEYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPFFPKNMKQ-----ELD 331
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + + + + A RA + +
Sbjct: 332 GDYRIP----VLIRIEP---DRFEKKIGGSFDFEQHLKQAQSLGLRASMKSANLLTGALY 384
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + K+ D + + + + + ++ P
Sbjct: 385 IDLDFYPKEKVDKALFVMDGYPVLPTIDGGL-----------SQIQQKLMAVLDKVNSLP 433
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ T+T+ +L +M K + + +Q + K+ ++ ++ +
Sbjct: 434 LNPMVNEATKTLTESQATLREMQKTLATLNKLTSSKAMQDLPEDMQKTLLELNRSMKGFQ 493
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + ++ + L T N ++ R
Sbjct: 494 PGSPAYNKMVADMQRLDQVLRELQPVLRTLNEKSNALVFEASGSQDPQPKR 544
>gi|332101364|gb|EGJ04710.1| conserved hypothetical protein [Shigella sp. D9]
Length = 891
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 31 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 82
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 83 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 127
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 771 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 829
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 830 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 884
>gi|168777772|ref|ZP_02802779.1| mce-related protein [Escherichia coli O157:H7 str. EC4196]
gi|168802389|ref|ZP_02827396.1| mce-related protein [Escherichia coli O157:H7 str. EC508]
gi|195939735|ref|ZP_03085117.1| hypothetical protein EscherichcoliO157_25590 [Escherichia coli
O157:H7 str. EC4024]
gi|208810356|ref|ZP_03252232.1| mce-related protein [Escherichia coli O157:H7 str. EC4206]
gi|254793458|ref|YP_003078295.1| hypothetical protein ECSP_2408 [Escherichia coli O157:H7 str.
TW14359]
gi|261227668|ref|ZP_05941949.1| mce-related protein [Escherichia coli O157:H7 str. FRIK2000]
gi|261258166|ref|ZP_05950699.1| mce-related protein [Escherichia coli O157:H7 str. FRIK966]
gi|187767056|gb|EDU30900.1| mce-related protein [Escherichia coli O157:H7 str. EC4196]
gi|189375631|gb|EDU94047.1| mce-related protein [Escherichia coli O157:H7 str. EC508]
gi|208724872|gb|EDZ74579.1| mce-related protein [Escherichia coli O157:H7 str. EC4206]
gi|254592858|gb|ACT72219.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|320188534|gb|EFW63196.1| Paraquat-inducible protein B [Escherichia coli O157:H7 str. EC1212]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 41.1 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 25/112 (22%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 760 LGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDF 818
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 819 GLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|170684215|ref|YP_001743411.1| mce-related protein [Escherichia coli SMS-3-5]
gi|170521933|gb|ACB20111.1| mce-related protein [Escherichia coli SMS-3-5]
Length = 879
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|238757651|ref|ZP_04618835.1| Paraquat-inducible protein B [Yersinia aldovae ATCC 35236]
gi|238704156|gb|EEP96689.1| Paraquat-inducible protein B [Yersinia aldovae ATCC 35236]
Length = 541
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 74/291 (25%), Gaps = 23/291 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + + V F GI VG + + E +
Sbjct: 271 SIQNSLYTEHEDFLLFFSDSVRGLQSGAPVEFRGIRVGTVADVPFFAEGMKQ-----RVD 325
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + + A ER RA + +
Sbjct: 326 NDFRIP----VLIRIEP---GRFQNDLGPDANFAQMLKTAKERGLRASLKSGNLLTGALF 378
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + A + + + P
Sbjct: 379 VDLDFYPDAKPWKGPLEVAGYPLLPTASGGL-----------AQIQQKVMQTLDKINNLP 427
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T+ + ++ + K ++ +Q + K+ +++ ++ +
Sbjct: 428 LDPMVTEVTKTLAESQRTMRETQKTLEALTAITSSPAMQDMPKDLQKTLNELNRSMKGFQ 487
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + ++ + L T N + +
Sbjct: 488 PGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKK 538
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/421 (10%), Positives = 112/421 (26%), Gaps = 45/421 (10%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ I + + G L+ V F G VG + D +
Sbjct: 152 IRIILDSNQAGQLNAADPVLFRGYRVGSVESSTFDAKSR--------------------- 190
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+R Q G Y L T +A + + + M S F
Sbjct: 191 MMRYQLFIGAPYDSLVTTNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGL 250
Query: 160 DSSRHI-----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
D + I + + + + ++ + ++ + + +
Sbjct: 251 DPGKQITEPKAEFKLFDNRSSIQNSLYTEHEDFLLFFSDSVRGLQSGAPVEFRGIRVGTV 310
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + I + + + + +R + ++
Sbjct: 311 ADVPFFAEGMKQRVDNDFRIPVLIRIEPGRFQNDLGPDANFAQMLKTAKERGLRASLKSG 370
Query: 275 QEVGQKI-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ + L +K + + S + I T + +
Sbjct: 371 NLLTGALFVDLDFYPDAKPWKGPLEVAGYPLLPTASGGLAQIQQKVMQTLDKINNLPLDP 430
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ +T L +S + E + ++A+ + + +D + + + + +
Sbjct: 431 MVTEVTKTLAESQRTMRETQKTLEALTAITSSPA-----------MQDMPKDLQKTLNEL 479
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+++ F Q G +V +Q + L +V+ E + +P
Sbjct: 480 NRSMKGF-QPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQP 536
Query: 451 K 451
K
Sbjct: 537 K 537
>gi|226365586|ref|YP_002783369.1| Mce family protein [Rhodococcus opacus B4]
gi|226244076|dbj|BAH54424.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 346
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/287 (10%), Positives = 89/287 (31%), Gaps = 8/287 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG+ + + + + R + + + + GL+ V G+P
Sbjct: 23 VNPLIVGIVGILAATLALALVLVIPRVS-FSVRTDGYTAEL-ANAAGLTDSDYVYVAGVP 80
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
GR+ + L + H + + L +T+A ++ + G Y+++S
Sbjct: 81 AGRVTAVDLAGD---HVVVHFRLDGARHLGSTTSAGVKLSTILGKRYLDVSPSGPGDLGG 137
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + G + + E + + + ++ +
Sbjct: 138 DGVIPLSRTSVPYSLDDIGSSAIETADELDLGGLQKMLTVVTDTVPQDATLNREALSGVS 197
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
S +LA N + +++ ++ +D + ++ + I
Sbjct: 198 AASAILAKNADQVTQLLDSS---RTLTDVLVGQQDQLTTLLGNADVVMTTLATRREAIRR 254
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ ++S + ++ ++V ++D L++ +
Sbjct: 255 MVDDLQALIAQASQFLGENTAELDSLLANARQVTDRLDANLANLDAL 301
>gi|118464887|ref|YP_884166.1| Mce family protein [Mycobacterium avium 104]
gi|118166174|gb|ABK67071.1| putative Mce family protein [Mycobacterium avium 104]
Length = 319
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/265 (11%), Positives = 74/265 (27%), Gaps = 14/265 (5%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
V GL S+V G+ VG++ + N + + + + +
Sbjct: 46 DVKGLVVGSNVLLRGVAVGKVTKIE---SSVNSATVDFYVDAAQRIPVDSNVRLDNLSAL 102
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPS---------GINYFISNAENTSKKI 158
G YI L + + + + S + +
Sbjct: 103 GEAYIGLIPRTDHGPMLKDGQRIATEAVTVPPSISELATSVVRVLNQLDPDQLKRIVDET 162
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ Q+ + N+ + ++ +S+ ++ + +
Sbjct: 163 DHALPDPQQTLPNLTRASILLHNMVQGQHGEGRRVLSNFQTLLQNASWVGPT--LADLVP 220
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
++ D + + + V EN+++ + + DV+ TQT
Sbjct: 221 SVRDAGKGIAGTYRGMMNTVVWNNPENMRLFGKFLDRIQAFLDTRGPDVKVLTQTLTPQF 280
Query: 279 QKIDHLLSDFSSKMKSKETSAFLEN 303
Q I L +F + A +
Sbjct: 281 QGIGGALMNFDTGQILSNVLAGIPE 305
>gi|15802247|ref|NP_288271.1| hypothetical protein Z2881 [Escherichia coli O157:H7 EDL933]
gi|12515884|gb|AAG56824.1|AE005406_3 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
Length = 879
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 41.5 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 25/112 (22%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 762 LGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIXMRISKRYQHLVRNNSVFWLASGYSLDF 820
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 821 GLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|15831798|ref|NP_310571.1| hypothetical protein ECs2544 [Escherichia coli O157:H7 str. Sakai]
gi|168758587|ref|ZP_02783594.1| mce-related protein [Escherichia coli O157:H7 str. EC4401]
gi|188025254|ref|ZP_02997417.1| mce-related protein [Escherichia coli O157:H7 str. EC4113]
gi|189010617|ref|ZP_03006394.1| mce-related protein [Escherichia coli O157:H7 str. EC4076]
gi|189403505|ref|ZP_03007107.1| mce-related protein [Escherichia coli O157:H7 str. EC4486]
gi|189404119|ref|ZP_03007335.1| mce-related protein [Escherichia coli O157:H7 str. EC4501]
gi|189405091|ref|ZP_02813259.2| mce-related protein [Escherichia coli O157:H7 str. EC869]
gi|208817065|ref|ZP_03258185.1| mce-related protein [Escherichia coli O157:H7 str. EC4045]
gi|209400762|ref|YP_002270916.1| mce-related protein [Escherichia coli O157:H7 str. EC4115]
gi|217329027|ref|ZP_03445108.1| mce-related protein [Escherichia coli O157:H7 str. TW14588]
gi|13362011|dbj|BAB35967.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|188013974|gb|EDU52096.1| mce-related protein [Escherichia coli O157:H7 str. EC4113]
gi|188999478|gb|EDU68464.1| mce-related protein [Escherichia coli O157:H7 str. EC4076]
gi|189354613|gb|EDU73032.1| mce-related protein [Escherichia coli O157:H7 str. EC4401]
gi|189360320|gb|EDU78739.1| mce-related protein [Escherichia coli O157:H7 str. EC4486]
gi|189367412|gb|EDU85828.1| mce-related protein [Escherichia coli O157:H7 str. EC4501]
gi|189371989|gb|EDU90405.1| mce-related protein [Escherichia coli O157:H7 str. EC869]
gi|208731408|gb|EDZ80097.1| mce-related protein [Escherichia coli O157:H7 str. EC4045]
gi|209162162|gb|ACI39595.1| mce-related protein [Escherichia coli O157:H7 str. EC4115]
gi|209767740|gb|ACI82182.1| hypothetical protein ECs2544 [Escherichia coli]
gi|209767742|gb|ACI82183.1| hypothetical protein ECs2544 [Escherichia coli]
gi|209767746|gb|ACI82185.1| hypothetical protein ECs2544 [Escherichia coli]
gi|217318374|gb|EEC26801.1| mce-related protein [Escherichia coli O157:H7 str. TW14588]
gi|326342213|gb|EGD65994.1| Paraquat-inducible protein B [Escherichia coli O157:H7 str. 1044]
gi|326343763|gb|EGD67525.1| Paraquat-inducible protein B [Escherichia coli O157:H7 str. 1125]
Length = 879
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 41.1 bits (93), Expect = 0.37, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 25/112 (22%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 762 LGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYSLDF 820
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 821 GLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|218548606|ref|YP_002382397.1| hypothetical protein EFER_1240 [Escherichia fergusonii ATCC 35469]
gi|218356147|emb|CAQ88764.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
gi|325497022|gb|EGC94881.1| hypothetical protein ECD227_1119 [Escherichia fergusonii ECD227]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|302560796|ref|ZP_07313138.1| virulence factor Mce family protein [Streptomyces griseoflavus
Tu4000]
gi|302478414|gb|EFL41507.1| virulence factor Mce family protein [Streptomyces griseoflavus
Tu4000]
Length = 413
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 30/86 (34%), Gaps = 2/86 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V + V L S+V+ N + VGR+ + L ++ + I
Sbjct: 44 LPGGADLGDHPYTVTAEL-QDVLSLVPHSAVKVNDVAVGRVTAVELGRDD-WSARVTMRI 101
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE 113
L TA + L G Y++
Sbjct: 102 NGQVRLPADATARLEQSSLLGEKYVQ 127
>gi|145221303|ref|YP_001131981.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213789|gb|ABP43193.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 543
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/297 (9%), Positives = 74/297 (24%), Gaps = 5/297 (1%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V+ ++ + V+ G+ VG I + + + +
Sbjct: 45 TKTVVAYFTQTLA-IYPGDKVQIMGVQVGAIDKIEPAGD---KMKVTFHYEDKYRVPENA 100
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIAT-ERNQRAMITATPSGINYFISNAENTSK 156
TA+I L I+LS T+ A + ++ + + +
Sbjct: 101 TASILNPSLVASRTIQLSPAYTGGNTLPDNAVLDIDRTQVPVEYDDLRDSISRLLTDLGP 160
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
IIE+ + + L+ + +++ S +
Sbjct: 161 TPEQPKGPFGDIIESAADGFAGKGKQLNSTLNNLSEALFALNEGRGDFFSVVKSLATFVN 220
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+D A + + + + + + E +
Sbjct: 221 ALHQSDQQFVALNNDLAQFTNAFTDSDREVANALQDLDELLTTTRGFIDENGEVLAHDVQ 280
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ + + + N+A + N+ S + + +
Sbjct: 281 NLAEVTNAILQPEPLDGLETALHAYPNVAANLMNISSPNAGGIVTMPVISNFANPMQ 337
>gi|300938814|ref|ZP_07153524.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300456247|gb|EFK19740.1| conserved hypothetical protein [Escherichia coli MS 21-1]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|262201465|ref|YP_003272673.1| mammalian cell entry related domain-containing protein [Gordonia
bronchialis DSM 43247]
gi|262084812|gb|ACY20780.1| Mammalian cell entry related domain protein [Gordonia bronchialis
DSM 43247]
Length = 228
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/120 (13%), Positives = 45/120 (37%), Gaps = 6/120 (5%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F+V + I +++ + + + GL+ + V G+ +G + +
Sbjct: 22 IFLVLSAVIIPYGINFIAGPEGFGDKLT--LHATMTDAFGLTEGTGVTLRGVDIGTVKSV 79
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L + + + ++R DT + + + +AGI +++ + + T
Sbjct: 80 TL----GDAADIELVVRGDTRIPADSFMQVTMASMAGIQSVDIIPSNDDPPYLQSGDTIA 135
>gi|120600242|ref|YP_964816.1| hypothetical protein Sputw3181_3450 [Shewanella sp. W3-18-1]
gi|146291828|ref|YP_001182252.1| hypothetical protein Sputcn32_0723 [Shewanella putrefaciens CN-32]
gi|120560335|gb|ABM26262.1| Mammalian cell entry related domain protein [Shewanella sp.
W3-18-1]
gi|145563518|gb|ABP74453.1| Mammalian cell entry related domain protein [Shewanella
putrefaciens CN-32]
gi|319425063|gb|ADV53137.1| ABC phospholipid transporter, periplasmic ligand-binding subunit,
MlaD [Shewanella putrefaciens 200]
Length = 157
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 52/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+F+++ L ++ ++ + + ++ GL S V+
Sbjct: 1 MLTRKIELLVGVFLLTGLAAFLVLVFNVANIEVKTSDSSYTLTANFTNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-- 118
G+ VGR+ + LD + + + +++ I T GL G ++ L+
Sbjct: 61 GGVVVGRVSSIDLDPVKLVAVVTIVMDKRYDKFPETSSLAILTSGLLGEQFLGLTPGFVD 120
Query: 119 KEKKTIFQIATERNQR 134
+ + + R
Sbjct: 121 DDIGMLKDGDKIDDTR 136
>gi|323166481|gb|EFZ52244.1| hypothetical protein SS53G_3159 [Shigella sonnei 53G]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|307626686|gb|ADN70990.1| mce-related protein [Escherichia coli UM146]
gi|315286547|gb|EFU45982.1| conserved hypothetical protein [Escherichia coli MS 110-3]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|238919296|ref|YP_002932811.1| paraquat-inducible protein B [Edwardsiella ictaluri 93-146]
gi|238868865|gb|ACR68576.1| paraquat-inducible protein B [Edwardsiella ictaluri 93-146]
Length = 545
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/410 (10%), Positives = 100/410 (24%), Gaps = 27/410 (6%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
I+ + L+ V F G+ VG + D + + P T +
Sbjct: 159 IMLVSDKAGQLNPGDPVLFRGLRVGSVETSGFDTKAR---KITYQLFIAAPYDTLVTENV 215
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
R +GI++ + + + + S + ++
Sbjct: 216 RFWVDSGISFDVSAQGMRVQMGSLTTLLSGGVSFDVPQGLSPGKEVANLSDYILY----- 270
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ I +++ + L + + V K +
Sbjct: 271 -DNQNSIQDSLYTEHFDVLMFFADSIRGLQAGAPVEFRGIRLGTVAQVPYYVKGLDQRLD 329
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + N + + + + T
Sbjct: 330 ANYRIPVLVHIE-PERIKENMGNNFNLHQHLLGVRHSGLRAALKSSNLLTGALYIDLDFY 388
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
+ + S + + + I+
Sbjct: 389 PNAKPWKGPDVISGIPIMPTVSGGLAQ---LQQKVTAVLDKLNALPLEPMISAATGALKT 445
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ K E + ++NNI + K SL D QR++ T + I
Sbjct: 446 SQGTMLKTQETLRQLNNILSSKAMQSLPGDLQRSLIELNRTIKGIQP------------G 493
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + + ++ L + + L + +V+ E + K PK
Sbjct: 494 SPAYNQMVSDLQHLDQVLRELQPVLRTLNQKSNALVF--EAPAGKDPHPK 541
Score = 49.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 9/67 (13%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL---------FLDQEYPN 79
S + +V++ S+ GL + V F GI +G + + LD Y
Sbjct: 275 SIQDSLYTEHFDVLMFFADSIRGLQAGAPVEFRGIRLGTVAQVPYYVKGLDQRLDANYRI 334
Query: 80 HSLAKAL 86
L
Sbjct: 335 PVLVHIE 341
>gi|324113569|gb|EGC07544.1| hypothetical protein ERIG_01987 [Escherichia fergusonii B253]
Length = 879
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|238749737|ref|ZP_04611242.1| Paraquat-inducible protein B [Yersinia rohdei ATCC 43380]
gi|238712392|gb|EEQ04605.1| Paraquat-inducible protein B [Yersinia rohdei ATCC 43380]
Length = 541
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/291 (11%), Positives = 76/291 (26%), Gaps = 23/291 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + V F GI VG + + +
Sbjct: 271 SIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRVGTVGDVPFFAPGMKQ-----RVD 325
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + I + A ER RA + +
Sbjct: 326 NDFRIP----VLIRIEP---GRFRNDLGPDANFEQILKTAKERGLRASLKSGNLLTGALF 378
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + T+S LA + + + P
Sbjct: 379 IDLDFYP-----------DAKPWKGPLQVAGYPLLPTVSGGLAQIQQKVMQTLDKINHLP 427
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T+ ++ + K ++ +Q + K+ +++ ++ +
Sbjct: 428 LEPMISEVTKTLVTSQQTMHETQKTLEALTAITSSPAMQDLPKDLQKTLNELNRSMKGFQ 487
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + ++ + L T N + +
Sbjct: 488 PGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKK 538
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/414 (9%), Positives = 106/414 (25%), Gaps = 34/414 (8%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
I+ L++ V F G VG + D + L + P TA +
Sbjct: 154 IVLDSEQAGQLNSGDPVLFRGYQVGSVETSTFDAKSR---LMHYQLFIRAPYDGLVTANV 210
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
R ++G+ S + + + E +
Sbjct: 211 RFWKVSGVAVDVSSQGMRIEMASLATLLSGGVSFDVP-------------EGEDPGKPVT 257
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ + + + ++ + ++ + + +
Sbjct: 258 QDKAEFKLFDNRSSIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRVGTVGDVPFFA 317
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ I + + + +R + ++ + +
Sbjct: 318 PGMKQRVDNDFRIPVLIRIEPGRFRNDLGPDANFEQILKTAKERGLRASLKSGNLLTGAL 377
Query: 282 -DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
L +K + + S + I T + + I +T
Sbjct: 378 FIDLDFYPDAKPWKGPLQVAGYPLLPTVSGGLAQIQQKVMQTLDKINHLPLEPMISEVTK 437
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
L S Q E + ++A+ + + +D + + + + + +++ F
Sbjct: 438 TLVTSQQTMHETQKTLEALTAITSSPA-----------MQDLPKDLQKTLNELNRSMKGF 486
Query: 401 SQSGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
Q G +V +Q + L +V+ E + +PK
Sbjct: 487 -QPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 537
>gi|111021674|ref|YP_704646.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110821204|gb|ABG96488.1| MCE family protein [Rhodococcus jostii RHA1]
Length = 405
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/373 (11%), Positives = 108/373 (28%), Gaps = 19/373 (5%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLS 53
+K+ G + S L + V I++P +V LS
Sbjct: 2 TKHTRVRRGGIAAVAITLSLTLTGCEWEGLNSLPLPGTEGQGDDAYTVEIQMP-NVTTLS 60
Query: 54 TDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
+S VR N + VG + G+ + H+L I D L + TA I L G ++E
Sbjct: 61 QNSPVRVNDVTVGSVTGIDVQ---DWHALVTVSINGDVQLPANATAKIGQTSLLGSQHLE 117
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATP-SGINYFISNAENTSKKISDSSRHIQKIIENI 172
L+ + + A P + + I+ ++ +
Sbjct: 118 LAPPTDAEPEGRLENGDVIPIERAGAYPTTEQTLSSLSVVLNGGGIAQVRDITTELNAAL 177
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ + + + ++ + ++ + + + N D
Sbjct: 178 DGREDSIRDLLPQLDQLVTSLDRQRGDIIGAMEGLDRLAGTVNEQKATLDAALDGIPPAL 237
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + + + + +S V ++ +++ V +++ + S + +
Sbjct: 238 EVLVTQRQNLTTALVEVGKLSDTASRLVESSGEELKANLANLTPVLRELANSGSALTEVL 297
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
T F D ++ + ++ + L S
Sbjct: 298 TLMLTYPFPMKTMD-----KAIQGDYANLMMTIDMTNERLDNNFLTGTGLGGSLGGVEGA 352
Query: 353 MSKINNISALKEN 365
+ + ++ +
Sbjct: 353 VGSLAGVAGQSGD 365
>gi|85059001|ref|YP_454703.1| paraquat-inducible protein B [Sodalis glossinidius str.
'morsitans']
gi|84779521|dbj|BAE74298.1| paraquat-inducible protein B [Sodalis glossinidius str.
'morsitans']
Length = 546
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/418 (9%), Positives = 93/418 (22%), Gaps = 42/418 (10%)
Query: 41 VIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ I++ G LS V F G VG + D
Sbjct: 159 IRIQLDSDRSGQLSAGDPVLFRGFRVGTVETSHFDPLKR--------------------- 197
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ Q Y L T +A + M S F
Sbjct: 198 MMNYQLFVNAPYDRLVTNNVRFWKDSGVALNLSASGMRVEMGSLTTLFAGGVSFDVPTGW 257
Query: 160 DSSR-HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ ++ + ++ T + + T
Sbjct: 258 ELGDAAKEQQRYQLFDNKNDIADSLYTQHQDYVLFFDDSIRGLQPGAPVEFRGIRLGTVA 317
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ S D+ + V +E + S + + +
Sbjct: 318 EVPFATVSADQEMNGDYRVPVLIRIEPDRFISKVGKNFDINKRLVAAEGQGFRAVLKSAN 377
Query: 279 QKIDHLLSDFSSKMKS-------KETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
L D ++ + + +
Sbjct: 378 LLTGTLYVDLDFYPQAKAWPGPTTVKGYPVMPTTSAGLAQIQQKLTATLDKINALPLDPM 437
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+N + + + Q+ + +N I+ L +D Q+ + + + P
Sbjct: 438 LNQATSTLAQSRSTLQELQRTLKAVNKITESASMKQLPQDMQQTLKELNRSMKGFQPGAP 497
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ + + +++L + + L +V+ +KG K
Sbjct: 498 AYTKMVAD------------MQRLDQVLRELQPVLRTLNSKSNALVFEADKGKDPQPK 543
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/286 (10%), Positives = 73/286 (25%), Gaps = 30/286 (10%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHSLAKALIR 88
+ ++ S+ GL + V F GI +G + + I
Sbjct: 284 TQHQDYVLFFDDSIRGLQPGAPVEFRGIRLGTVAEVPFATVSADQEMNGDYRVPVLIRIE 343
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
PD + + + + + + +
Sbjct: 344 PDRFISK------VGKNFDINKRLVAAEGQGFRAVLKSANLLTG---------------- 381
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + TT A + I L + I+ + +
Sbjct: 382 -TLYVDLDFYPQAKAWPGPTTVKGYPVMPTTSAGLAQIQQKLTATLDKINALPLDPMLNQ 440
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+S + +T+ +L +L + K + + Q+ +++Q + +S
Sbjct: 441 ATSTLAQSRSTLQELQRTLKAVNKITESASMKQLPQDMQQTLKELNRSMKGFQPGAPAYT 500
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
+ Q + Q + L + F + R+
Sbjct: 501 KMVADMQRLDQVLRELQPVLRTLNSKSNALVFEADKGKDPQPKRAK 546
>gi|332037637|gb|EGI74089.1| paraquat-inducible protein B [Pseudoalteromonas haloplanktis
ANT/505]
Length = 551
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/264 (11%), Positives = 74/264 (28%), Gaps = 16/264 (6%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG----LFLDQ------EYPNHSLAK 84
+I SV GL T + V + G+ VG +V + +D +
Sbjct: 279 FYDFDYYLIEFEQSVRGLRTGAPVEYRGMRVGTVVETPANVIIDGKPAHFRNHNTAVPVL 338
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + S +A QG + + A + A P
Sbjct: 339 IKVEYGRLYHDSASAKEYWQGSLKGWIESGMRASLKPGNLLTGAVYVDFDIYPDA-PEAH 397
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ + S + ++ + + K + + + + M
Sbjct: 398 LGKLVQYDVFPSISSGITVLADQVSDVLNKVNNLKVEDSLAQMQATFTDYRALANEMREL 457
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ + FN + +T + + Q + S + Q+ T+
Sbjct: 458 LSQKDTQNLPGDFNRNFEKMTKSMEQFEVTMRQFDKTMA-----SYQAGSELHHQIQQTL 512
Query: 265 HDVRETTQTFQEVGQKIDHLLSDF 288
+ + ++ Q + + ++ +
Sbjct: 513 KEFKRLSEGLQPLTRGLNEQPNML 536
>gi|327252956|gb|EGE64610.1| hypothetical protein ECSTEC7V_2201 [Escherichia coli STEC_7v]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|51595785|ref|YP_069976.1| paraquat-inducible protein B [Yersinia pseudotuberculosis IP 32953]
gi|149366678|ref|ZP_01888712.1| putative paraquat-inducible protein B [Yersinia pestis CA88-4125]
gi|218928569|ref|YP_002346444.1| paraquat-inducible protein B [Yersinia pestis CO92]
gi|51589067|emb|CAH20685.1| putative paraquat-inducible protein B [Yersinia pseudotuberculosis
IP 32953]
gi|115347180|emb|CAL20073.1| putative paraquat-inducible protein B [Yersinia pestis CO92]
gi|149291052|gb|EDM41127.1| putative paraquat-inducible protein B [Yersinia pestis CA88-4125]
Length = 541
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/412 (8%), Positives = 100/412 (24%), Gaps = 38/412 (9%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 158 SDQAGQLNAGDPVLFRGYRVGSVETSTFDPQSR---------------------LMRYQL 196
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK-----ISD 160
G Y L T +A + + + M S F
Sbjct: 197 FIGAPYDSLVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPV 256
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + + ++ + ++ + + +
Sbjct: 257 TQDKAEFKLFDDRSSIQNSLYIEHENFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFF 316
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + I + + + +R + ++ +
Sbjct: 317 AEGMKQQVDNDFRIPVLIRIEPGRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTG- 375
Query: 281 IDHLLSDFSSKMKS-KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
L D + + ++ I++ Q I+ + +
Sbjct: 376 --ALFVDLDFYPDAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNP-MV 432
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + + + + M + + A + + Q + T ++NR +
Sbjct: 433 NEVTKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKTLNELNRSMKGFQP---- 488
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + +++L + + L +V+ E + +PK
Sbjct: 489 -GSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 537
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 78/283 (27%), Gaps = 23/283 (8%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ SV GL + + V F GI VG + + E + D +
Sbjct: 279 EHENFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFFAEGMKQ-----QVDNDFRIP-- 331
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
IR + + + + + + A ER RA + + + +
Sbjct: 332 --VLIRIEP---GRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLDFYP- 385
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ TIS LA + + + P +
Sbjct: 386 ----------DAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNPMVNEV 435
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + ++ + K + +++Q + K+ +++ ++ + + + +
Sbjct: 436 TKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKTLNELNRSMKGFQPGSPAYNK 495
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + L T N + +
Sbjct: 496 MVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKK 538
>gi|194434533|ref|ZP_03066792.1| mce-related protein [Shigella dysenteriae 1012]
gi|194417245|gb|EDX33355.1| mce-related protein [Shigella dysenteriae 1012]
gi|332093317|gb|EGI98376.1| hypothetical protein SD15574_1943 [Shigella dysenteriae 155-74]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|300917593|ref|ZP_07134246.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300415193|gb|EFJ98503.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|294490073|gb|ADE88829.1| mce-related protein [Escherichia coli IHE3034]
gi|323956464|gb|EGB52206.1| hypothetical protein ERLG_02293 [Escherichia coli H263]
Length = 879
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|110641952|ref|YP_669682.1| hypothetical protein ECP_1778 [Escherichia coli 536]
gi|191172966|ref|ZP_03034500.1| mce-related protein [Escherichia coli F11]
gi|300982042|ref|ZP_07175861.1| hypothetical protein HMPREF9553_02027 [Escherichia coli MS 200-1]
gi|110343544|gb|ABG69781.1| hypothetical protein YebT (putative membrane protein) [Escherichia
coli 536]
gi|190906677|gb|EDV66282.1| mce-related protein [Escherichia coli F11]
gi|300307344|gb|EFJ61864.1| hypothetical protein HMPREF9553_02027 [Escherichia coli MS 200-1]
gi|320194452|gb|EFW69083.1| Paraquat-inducible protein B [Escherichia coli WV_060327]
gi|324007209|gb|EGB76428.1| hypothetical protein HMPREF9532_03121 [Escherichia coli MS 57-2]
gi|324011608|gb|EGB80827.1| hypothetical protein HMPREF9533_04382 [Escherichia coli MS 60-1]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|309702058|emb|CBJ01372.1| conserved hypothetical protein [Escherichia coli ETEC H10407]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|300789435|ref|YP_003769726.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299798949|gb|ADJ49324.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 323
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/313 (11%), Positives = 94/313 (30%), Gaps = 10/313 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M+S T+V + + L V +V L S
Sbjct: 1 MKSLVKLTAVVTLALVTTGCGSGVSVYDIPLPGGAALGDHPIHVTASFT-NVLDLVPQSG 59
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI---EL 114
V+ N +PVG++V + L + + L+ D L + A +R + G ++
Sbjct: 60 VKVNDVPVGQVVRVELAPDGHSAV-VDLLLNGDVDLPGNAVARLRQASILGEKFVELAPP 118
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + A ++ + + ++ ++ + +
Sbjct: 119 DDATPSGRLLDGAAIPLDRSTLTPEIEEVFGA--LSLLLNGGGVAQVQNISHELNDALGG 176
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
T + + + T + H +++ + + + N + +
Sbjct: 177 KETAARSLLSNLDTFVQGLDEHRNEITRAIESVNKLAATLNAHTDRVTTTLNGLTPGIGV 236
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
Q+ ++ ++ + D V + D+ + + + +++ M+
Sbjct: 237 LNQQREALVGMLKSLDGLTSVAVDTVNRSKDDLVADLRALEPLLRRLADAGDKLPKAMEM 296
Query: 295 KETSAFLENIADS 307
T F + D+
Sbjct: 297 IFTFPFPDAALDT 309
>gi|283478881|emb|CAY74797.1| pqiB [Erwinia pyrifoliae DSM 12163]
Length = 565
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/404 (8%), Positives = 90/404 (22%), Gaps = 25/404 (6%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L V F G VG + D + + + P T +R
Sbjct: 184 SEKAGQLKAGDPVLFRGYRVGSVETSAFDADKR---MMTYQLFIAAPYDRLVTTNVRFWK 240
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+GI ++ + + I + AE S +
Sbjct: 241 DSGIAVDMSASGMRVEMGSLTTLFSGGVSFDIPDGWESGTTAENKAEYRLFNDQRSIQDS 300
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ + + ++ T I +
Sbjct: 301 LYSVHKDFLLF----------FNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIVQRLN 350
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ ++ I ++ + + + ++ + +D
Sbjct: 351 NDFRIPVLIRIEPDRFKTQLGSDFNFEQHLKDGVAVGLRASLKSANLLTGALYVDLDFYN 410
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + + A R + +N +
Sbjct: 411 NVKPASGPATFAQYSVIPTASGGLAQIQQKLMESLDKINRLPLNPLLNEAAGTLKESQRT 470
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ + + +N ++ + L D Q + + +
Sbjct: 471 LKELQKTLDNLNQLTTSQSMKELPADMQSTLRELNRSMKGFQP------------GSPVY 518
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
N + +++L + + L +V+ + G K
Sbjct: 519 NKMVGDMQRLDQVLRELQPVLKTLNNKSNALVFEAKPGQDPQPK 562
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-------QEYPNHSLAKALIRPD 90
++ SV GL + V F GI +G + + I PD
Sbjct: 308 FLLFFNDSVRGLQKGAPVEFRGIRLGTVAEVPFTMPGIVQRLNNDFRIPVLIRIEPD 364
>gi|320181123|gb|EFW56042.1| Paraquat-inducible protein B [Shigella boydii ATCC 9905]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|301327597|ref|ZP_07220814.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|300845846|gb|EFK73606.1| conserved hypothetical protein [Escherichia coli MS 78-1]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|293446206|ref|ZP_06662628.1| yebT protein [Escherichia coli B088]
gi|291323036|gb|EFE62464.1| yebT protein [Escherichia coli B088]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|170019821|ref|YP_001724775.1| hypothetical protein EcolC_1798 [Escherichia coli ATCC 8739]
gi|169754749|gb|ACA77448.1| Mammalian cell entry related domain protein [Escherichia coli ATCC
8739]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|110835178|ref|YP_694037.1| paraquat-inducible protein B [Alcanivorax borkumensis SK2]
gi|110648289|emb|CAL17765.1| Paraquat-inducible protein B, putative [Alcanivorax borkumensis
SK2]
Length = 537
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/400 (9%), Positives = 105/400 (26%), Gaps = 33/400 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYP-NHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
++ V F + VGR+V D++ D + S+ + +
Sbjct: 166 INNGDPVSFRSLKVGRVVETQFDRQAKLFRHRLFIEKPYDVLVSESSRFWKVSGIGFQLD 225
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + + +++ + Q +
Sbjct: 226 ARGFQAQLSSLEALLGGGISFSVP-----------------DSSMATGAPVEDGHQFELH 268
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
N ++ + +L K + +
Sbjct: 269 NSQESARRALYTQTLDYVLLVERSVRGLKAGAPVEYRGIRVGTVEQVPWAFAEQGPNAMT 328
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I + + Q S+ +++ + V++ + + L D +
Sbjct: 329 DSPIPVLIRLEPQRVNQQSNIALTTWKEEISHMVNNGLRASLKAGNLLT--GSLFVDLAF 386
Query: 291 KMKSKETSA-FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ T N ++ + E ++N+ NLN++ +
Sbjct: 387 HQNAPTTDTSATYNSVPVMPSVAGGGLSKLEDQLHALLKTLNELPMKNMADNLNNNLKHL 446
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ + +I ++ N+L + + T + G ++Q
Sbjct: 447 SGVTGRIESLLNDPALNTLPQQISSNLDALDATLQGWQS------------GGDGYQELQ 494
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
++KL ++ + L+ P +++ R + +
Sbjct: 495 GTLQKLNRLLDSAEPLLDTLNEQPNALIFQRHPTTDPQPR 534
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/282 (8%), Positives = 76/282 (26%), Gaps = 32/282 (11%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--FLDQEYPNH-----SLAK 84
+ ++ + SV GL + V + GI VG + + ++ PN
Sbjct: 276 RALYTQTLDYVLLVERSVRGLKAGAPVEYRGIRVGTVEQVPWAFAEQGPNAMTDSPIPVL 335
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ P S A + + + + + A +
Sbjct: 336 IRLEPQRVNQQSNIALTTWKEEISHMVNNGLRASLKAGNLLTGSLFVDLAFHQNAPTTDT 395
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ ++ ++ + + + K ++
Sbjct: 396 SATYNSVPVMPSVAGGGLSKLE-------------------------DQLHALLKTLNEL 430
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ + + N ++ + ++ ++ L + Q + + + + ++ +
Sbjct: 431 PMKNMADNLNNNLKHLSGVTGRIESLLNDPALNTLPQQISSNLDALDATLQGWQSGGDGY 490
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+++ T Q + + LL + + +
Sbjct: 491 QELQGTLQKLNRLLDSAEPLLDTLNEQPNALIFQRHPTTDPQ 532
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 37/432 (8%), Positives = 116/432 (26%), Gaps = 13/432 (3%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L +F ++ + GP+ + + +G++ ++++ + +G + + L
Sbjct: 18 LIPLMAAFIGLWLVFSYLSSQGPIITLKL---EDAEGINAGKTAIKMRNVQIGVVESVSL 74
Query: 74 DQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
++ + L + D L+ + + LST+ +
Sbjct: 75 SEDLSHTLLSVQMQADTDRMLFSDAQFWVVKPRVGREGISGLSTVLSGAYIELLPGSNGK 134
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ T S + + + + +
Sbjct: 135 KTKTFTVKNSPPPEKTGDGLFLKLVSEPGTNINNGDPVSFRSLKVGRVVETQFDRQAKLF 194
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ + V+ S K + + +++ I ++ SS
Sbjct: 195 RHRLFIEKPYDVLVSESSRFWKVSGIGFQLDARGFQAQLSSLEALLGGGISFSVPDSSMA 254
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKID---HLLSDFSSKMKSKETSAFLENIADSTS 309
+ + + Q +D + +
Sbjct: 255 TGAPVEDGHQFELHNSQESARRALYTQTLDYVLLVERSVRGLKAGAPVEYRGIRVGTVEQ 314
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI--NNISALKENNS 367
+ + + + N + + E +S + N + A + +
Sbjct: 315 VPWAFAEQGPNAMTDSPIPVLIRLEPQRVNQQSNIALTTWKEEISHMVNNGLRASLKAGN 374
Query: 368 LFKDAQRAMHTFRDTSEKINRYIP-SIGNNLQNFSQSGLNDIQNLVRKLQETVNHF--DD 424
L + F + + + + + + GL+ +++ + L +T+N +
Sbjct: 375 LLTGSLFVDLAFHQNAPTTDTSATYNSVPVMPSVAGGGLSKLEDQLHALLKTLNELPMKN 434
Query: 425 CLNNFERNPQDI 436
+N N + +
Sbjct: 435 MADNLNNNLKHL 446
>gi|74311855|ref|YP_310274.1| hypothetical protein SSON_1327 [Shigella sonnei Ss046]
gi|73855332|gb|AAZ88039.1| conserved hypothetical protein [Shigella sonnei Ss046]
Length = 879
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|191168493|ref|ZP_03030280.1| mce-related protein [Escherichia coli B7A]
gi|194429673|ref|ZP_03062191.1| mce-related protein [Escherichia coli B171]
gi|218554408|ref|YP_002387321.1| hypothetical protein ECIAI1_1905 [Escherichia coli IAI1]
gi|218695400|ref|YP_002403067.1| hypothetical protein EC55989_2011 [Escherichia coli 55989]
gi|253773211|ref|YP_003036042.1| hypothetical protein ECBD_1806 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254161894|ref|YP_003045002.1| hypothetical protein ECB_01805 [Escherichia coli B str. REL606]
gi|256017978|ref|ZP_05431843.1| hypothetical protein ShiD9_03607 [Shigella sp. D9]
gi|260844180|ref|YP_003221958.1| hypothetical protein ECO103_2025 [Escherichia coli O103:H2 str.
12009]
gi|297517983|ref|ZP_06936369.1| mce-related protein [Escherichia coli OP50]
gi|300816276|ref|ZP_07096498.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300824226|ref|ZP_07104344.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300928862|ref|ZP_07144368.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|307314088|ref|ZP_07593700.1| Mammalian cell entry related domain protein [Escherichia coli W]
gi|309794214|ref|ZP_07688638.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|312969871|ref|ZP_07784054.1| uncharacterized protein yebT [Escherichia coli 1827-70]
gi|190901446|gb|EDV61208.1| mce-related protein [Escherichia coli B7A]
gi|194412315|gb|EDX28619.1| mce-related protein [Escherichia coli B171]
gi|218352132|emb|CAU97870.1| conserved hypothetical protein [Escherichia coli 55989]
gi|218361176|emb|CAQ98759.1| conserved hypothetical protein [Escherichia coli IAI1]
gi|242377555|emb|CAQ32310.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253324255|gb|ACT28857.1| Mammalian cell entry related domain protein [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253973795|gb|ACT39466.1| hypothetical protein ECB_01805 [Escherichia coli B str. REL606]
gi|253977989|gb|ACT43659.1| hypothetical protein ECD_01805 [Escherichia coli BL21(DE3)]
gi|257759327|dbj|BAI30824.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|300463152|gb|EFK26645.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300523297|gb|EFK44366.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|300530966|gb|EFK52028.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|306906226|gb|EFN36743.1| Mammalian cell entry related domain protein [Escherichia coli W]
gi|308122119|gb|EFO59381.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|310338156|gb|EFQ03245.1| uncharacterized protein yebT [Escherichia coli 1827-70]
gi|315061137|gb|ADT75464.1| conserved protein [Escherichia coli W]
gi|323158682|gb|EFZ44696.1| hypothetical protein ECE128010_5140 [Escherichia coli E128010]
gi|323186417|gb|EFZ71765.1| hypothetical protein ECOK1357_0187 [Escherichia coli 1357]
gi|323378286|gb|ADX50554.1| Mammalian cell entry related domain protein [Escherichia coli KO11]
gi|323948281|gb|EGB44269.1| hypothetical protein EREG_00244 [Escherichia coli H120]
gi|324018024|gb|EGB87243.1| hypothetical protein HMPREF9542_03308 [Escherichia coli MS 117-3]
gi|324118894|gb|EGC12783.1| hypothetical protein ERBG_01003 [Escherichia coli E1167]
Length = 877
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|301023079|ref|ZP_07186886.1| putative paraquat-inducible protein B [Escherichia coli MS 69-1]
gi|300397200|gb|EFJ80738.1| putative paraquat-inducible protein B [Escherichia coli MS 69-1]
Length = 552
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 97/411 (23%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + N I Q
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN---------------------ISYQLFIN 211
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + D + +
Sbjct: 212 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLDLGQPVAPK 271
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ +I + + + +
Sbjct: 272 TAFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 331
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
+ D + I + +++D V + ++ + + G + L D
Sbjct: 332 RQTFNDDYRIPVLIRIEPERLKMQLGENADVVEHLGELLKRGLRGSLKTGNLVTGALYVD 391
Query: 288 FSSKMKS-KETSAFLENIADSTSNMRSSISAIREITD------QRQKIISTINTIENITS 340
+ T N + ++ I++ + + I + S
Sbjct: 392 LDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 451
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 452 ESQRTMKNLQTTLDSMNKILASQSMQQLPMDMQSTLRELNRSMQGFQP------------ 499
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 500 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 548
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/270 (10%), Positives = 74/270 (27%), Gaps = 18/270 (6%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + S + + ++ SV GL + V F GI +G + +
Sbjct: 273 AFVLYDDQKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 332
Query: 74 -DQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
I P+ + A + G + + A
Sbjct: 333 QTFNDDYRIPVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYV 390
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + ++ Q+++E ++K + + +T
Sbjct: 391 DLDFYPNTPAITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTL 450
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ K + TT + + + + + + S + + + N
Sbjct: 451 SESQRTMKNLQTTLDSMNKILASQSMQQLPMDMQSTLRELNRSMQGFQPGSA-----AYN 505
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 506 KMVADMQRLDQVLRELQPVLKTLNEKSNAL 535
>gi|146311120|ref|YP_001176194.1| paraquat-inducible protein B [Enterobacter sp. 638]
gi|145317996|gb|ABP60143.1| Mammalian cell entry related domain protein [Enterobacter sp. 638]
Length = 545
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/403 (7%), Positives = 88/403 (21%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDPQKR-----TISYQLFINAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T A+ + D +
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGGGVSFDVPEGMELGQPVAAKTPFRLFDDQKSIQDAL 281
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + + + + +
Sbjct: 282 YTDH--------IDYLMFFKDSVRGLQPGAPVEFRGIRLGTVGQVPYFVPGLRQSLDDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ I ++ + + + + + ++ + +D
Sbjct: 334 RIPVLIRIEPERLLNQIGEAKDISGHINDLMNRGLRGSLKTGNLVTGALYVDMDFYPKAP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + S + + N + + ++
Sbjct: 394 AMTGVREFGGYKIIPTVSSGLAQIQQRLMETLDKINNLPLNPMLEQATNSLTESQATMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ IN I+A + L +D Q+ + + + + N +
Sbjct: 454 LQTTLDNINKITANQSMQQLPQDMQKTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/253 (10%), Positives = 69/253 (27%), Gaps = 13/253 (5%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQ------EYPNHSLAKALIR 88
+ ++ SV GL + V F GI +G + + + + I
Sbjct: 283 TDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVGQVPYFVPGLRQSLDDDYRIPVLIRIE 342
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
P+ L A G + + A + A
Sbjct: 343 PERLLNQIGEAK-DISGHINDLMNRGLRGSLKTGNLVTGALYVDMDFYPKAPAMTGVREF 401
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ S ++ Q+++E ++K + + +T + + TT
Sbjct: 402 GGYKIIPTVSSGLAQIQQRLMETLDKINNLPLNPMLEQATNSLTESQATMRRLQTTLDNI 461
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + + + + + + + N V ++ + +++
Sbjct: 462 NKITANQSMQQLPQDMQKTLRELNRSMQGFQPGSA-----AYNKMVADMQRLDQVLRELQ 516
Query: 269 ETTQTFQEVGQKI 281
+T E +
Sbjct: 517 PVLKTLNEKSNAL 529
>gi|26248097|ref|NP_754137.1| hypothetical protein c2243 [Escherichia coli CFT073]
gi|26108500|gb|AAN80702.1|AE016761_277 Hypothetical protein yebT [Escherichia coli CFT073]
Length = 891
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 31 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 82
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 83 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 127
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 771 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 829
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 830 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 884
>gi|302761922|ref|XP_002964383.1| hypothetical protein SELMODRAFT_142257 [Selaginella moellendorffii]
gi|300168112|gb|EFJ34716.1| hypothetical protein SELMODRAFT_142257 [Selaginella moellendorffii]
Length = 308
Score = 59.6 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/260 (7%), Positives = 63/260 (24%), Gaps = 6/260 (2%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
W+ + G++ + VR G+ VG ++ + E + +
Sbjct: 41 WVKGTQLRARSRKYFATFEFAKAWGITVGTPVRIRGVDVGTVIRVKPTLEKLD-VEVQI- 98
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
+ + + + + GL T I+++ I +
Sbjct: 99 VDANLVIPRNALVEVNQSGLVSETLIDITPQHP----IPSPTVGPLHPDCKGEGLIVCDR 154
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
E + + + + E +S + + K+
Sbjct: 155 ESIRGEQGVSLDELVGICTKLAKQIDAQGVKRLYDVGERMSLAVEEAKPLLAKVQSMAGD 214
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + +A + + ++ +S + T+
Sbjct: 215 MEPLIKEIRDGGLLKEFEKLTKVAAEAGEDLRKLNSSVLTPENTELLRQSVSTLTKTLKH 274
Query: 267 VRETTQTFQEVGQKIDHLLS 286
+ ++ + +
Sbjct: 275 IESISEDISGLTGDAGTRYN 294
>gi|323968601|gb|EGB64007.1| hypothetical protein ERJG_00282 [Escherichia coli M863]
gi|323977983|gb|EGB73069.1| hypothetical protein ERFG_01505 [Escherichia coli TW10509]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|194439057|ref|ZP_03071140.1| mce-related protein [Escherichia coli 101-1]
gi|194422016|gb|EDX38020.1| mce-related protein [Escherichia coli 101-1]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|193069877|ref|ZP_03050826.1| mce-related protein [Escherichia coli E110019]
gi|260855694|ref|YP_003229585.1| hypothetical protein ECO26_2604 [Escherichia coli O26:H11 str.
11368]
gi|260868355|ref|YP_003234757.1| hypothetical protein ECO111_2342 [Escherichia coli O111:H- str.
11128]
gi|300904699|ref|ZP_07122532.1| hypothetical protein HMPREF9536_02771 [Escherichia coli MS 84-1]
gi|300924904|ref|ZP_07140835.1| hypothetical protein HMPREF9548_03018 [Escherichia coli MS 182-1]
gi|301304406|ref|ZP_07210518.1| hypothetical protein HMPREF9347_03009 [Escherichia coli MS 124-1]
gi|192956777|gb|EDV87231.1| mce-related protein [Escherichia coli E110019]
gi|257754343|dbj|BAI25845.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
gi|257764711|dbj|BAI36206.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|300403366|gb|EFJ86904.1| hypothetical protein HMPREF9536_02771 [Escherichia coli MS 84-1]
gi|300418922|gb|EFK02233.1| hypothetical protein HMPREF9548_03018 [Escherichia coli MS 182-1]
gi|300840257|gb|EFK68017.1| hypothetical protein HMPREF9347_03009 [Escherichia coli MS 124-1]
gi|315257354|gb|EFU37322.1| PqiB protein [Escherichia coli MS 85-1]
gi|323180614|gb|EFZ66159.1| hypothetical protein ECOK1180_0603 [Escherichia coli 1180]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|323175089|gb|EFZ60703.1| hypothetical protein ECLT68_0186 [Escherichia coli LT-68]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|320641686|gb|EFX11074.1| mce-related protein [Escherichia coli O157:H7 str. G5101]
gi|320647045|gb|EFX15878.1| mce-related protein [Escherichia coli O157:H- str. 493-89]
gi|320652328|gb|EFX20626.1| mce-related protein [Escherichia coli O157:H- str. H 2687]
gi|320657929|gb|EFX25691.1| mce-related protein [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320668401|gb|EFX35228.1| mce-related protein [Escherichia coli O157:H7 str. LSU-61]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|307553851|gb|ADN46626.1| mce-related protein [Escherichia coli ABU 83972]
Length = 873
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 13 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 64
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 65 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 109
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 753 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 811
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 812 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 866
>gi|296103039|ref|YP_003613185.1| paraquat-inducible protein B [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057498|gb|ADF62236.1| paraquat-inducible protein B [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 546
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/403 (9%), Positives = 97/403 (24%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDPQKR-----TISYQLFINAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T + P G++ AE T+ ++ D R IQ
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG-GVSFDVPEGLDLGQPVAEKTAFRLFDDQRSIQDA 280
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + A ++ + ++
Sbjct: 281 LYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRL-------GTVGQVPFFVPGLQQVLDDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ I ++ + + + + ++ + +D
Sbjct: 334 RIPVLIRIEPERLVNQIGENQDIGAHITDLMNRGLRGSLKTGNLVTGALYVDMDFYPKAP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I ++ Q+
Sbjct: 394 PITGIREFGGYKIIPTVSSGLAQIQQRLMETLDKINNLPLNPMIEAATGSLHQSQETMQR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ IN ++A + L +D Q+ + + + + N +
Sbjct: 454 LQTTLDNINKLTASQSMQQLPQDMQKTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/258 (10%), Positives = 72/258 (27%), Gaps = 23/258 (8%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHSLAKALIR 88
+ ++ SV GL + V F GI +G + + + I
Sbjct: 283 TDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVGQVPFFVPGLQQVLDDDYRIPVLIRIE 342
Query: 89 PDTPL-----YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
P+ + A I G+ + + A + A P
Sbjct: 343 PERLVNQIGENQDIGAHITDLMNRGLR------GSLKTGNLVTGALYVDMDFYPKAPPIT 396
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ S ++ Q+++E ++K + + +T + + + T
Sbjct: 397 GIREFGGYKIIPTVSSGLAQIQQRLMETLDKINNLPLNPMIEAATGSLHQSQETMQRLQT 456
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
T + + + + + + + + N V ++
Sbjct: 457 TLDNINKLTASQSMQQLPQDMQKTLRELNRSMQGFQPGSA-----AYNKMVADMQRLDQV 511
Query: 264 VHDVRETTQTFQEVGQKI 281
+ +++ +T E +
Sbjct: 512 LRELQPVLKTLNEKSNAL 529
>gi|331647331|ref|ZP_08348425.1| mce related protein [Escherichia coli M605]
gi|281178901|dbj|BAI55231.1| conserved hypothetical protein [Escherichia coli SE15]
gi|331044114|gb|EGI16250.1| mce related protein [Escherichia coli M605]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|218558697|ref|YP_002391610.1| hypothetical protein ECS88_1887 [Escherichia coli S88]
gi|218365466|emb|CAR03193.1| conserved hypothetical protein [Escherichia coli S88]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|91791862|ref|YP_561513.1| hypothetical protein Sden_0498 [Shewanella denitrificans OS217]
gi|91713864|gb|ABE53790.1| Mammalian cell entry related [Shewanella denitrificans OS217]
Length = 157
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 54/132 (40%), Gaps = 2/132 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+F++S L ++ ++ + V++ ++ GL S V+
Sbjct: 1 MLTRKIELLVGMFLLSGLVAFCLLVFSVANVKINADDNSYVLVAEFNNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + +++ +I+T GL G ++ L+
Sbjct: 61 GGVVVGRVTDISLDSDKLVPI-VTLAMDKRFNQFPETSSLSIQTAGLLGEQFLGLTPGFV 119
Query: 120 EKKTIFQIATER 131
+ ++
Sbjct: 120 DDDIAMLGDGDK 131
>gi|331673367|ref|ZP_08374135.1| mce related protein [Escherichia coli TA280]
gi|331069565|gb|EGI40952.1| mce related protein [Escherichia coli TA280]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
Score = 37.2 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 11/100 (11%), Positives = 30/100 (30%), Gaps = 1/100 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
++ L++ S V F IPVG++ ++ + R + + +
Sbjct: 171 NLGSLNSGSLVYFRKIPVGKVYDYAINPNKQGVVIDVLIERRFTDLVKKGSRFWNVSGVD 230
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
A ++ + + A + + +
Sbjct: 231 ANVSISGAKVKLESLAALVNGAIAFDSPEESKPAEAEDTF 270
>gi|315299941|gb|EFU59179.1| conserved hypothetical protein [Escherichia coli MS 16-3]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|312967034|ref|ZP_07781252.1| uncharacterized protein yebT [Escherichia coli 2362-75]
gi|312288498|gb|EFR16400.1| uncharacterized protein yebT [Escherichia coli 2362-75]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|291283016|ref|YP_003499834.1| Mce-related protein [Escherichia coli O55:H7 str. CB9615]
gi|209767738|gb|ACI82181.1| hypothetical protein ECs2544 [Escherichia coli]
gi|209767744|gb|ACI82184.1| hypothetical protein ECs2544 [Escherichia coli]
gi|290762889|gb|ADD56850.1| Mce-related protein [Escherichia coli O55:H7 str. CB9615]
gi|320658502|gb|EFX26196.1| mce-related protein [Escherichia coli O55:H7 str. USDA 5905]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|222033583|emb|CAP76324.1| Uncharacterized protein yebT [Escherichia coli LF82]
gi|312946432|gb|ADR27259.1| hypothetical protein NRG857_09180 [Escherichia coli O83:H1 str. NRG
857C]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|218705333|ref|YP_002412852.1| hypothetical protein ECUMN_2128 [Escherichia coli UMN026]
gi|293405329|ref|ZP_06649321.1| yebT protein [Escherichia coli FVEC1412]
gi|293410144|ref|ZP_06653720.1| conserved hypothetical protein [Escherichia coli B354]
gi|298380971|ref|ZP_06990570.1| yebT protein [Escherichia coli FVEC1302]
gi|300899078|ref|ZP_07117363.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|301026586|ref|ZP_07190009.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|331663325|ref|ZP_08364235.1| mce related protein [Escherichia coli TA143]
gi|218432430|emb|CAR13322.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|291427537|gb|EFF00564.1| yebT protein [Escherichia coli FVEC1412]
gi|291470612|gb|EFF13096.1| conserved hypothetical protein [Escherichia coli B354]
gi|298278413|gb|EFI19927.1| yebT protein [Escherichia coli FVEC1302]
gi|300357287|gb|EFJ73157.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300395419|gb|EFJ78957.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|331059124|gb|EGI31101.1| mce related protein [Escherichia coli TA143]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|215487047|ref|YP_002329478.1| hypothetical protein E2348C_1959 [Escherichia coli O127:H6 str.
E2348/69]
gi|215265119|emb|CAS09507.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|323186839|gb|EFZ72158.1| hypothetical protein ECRN5871_4896 [Escherichia coli RN587/1]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|157157260|ref|YP_001463136.1| mce-related protein [Escherichia coli E24377A]
gi|157079290|gb|ABV18998.1| mce-related protein [Escherichia coli E24377A]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|157161301|ref|YP_001458619.1| mce-related protein [Escherichia coli HS]
gi|188494985|ref|ZP_03002255.1| mce-related protein [Escherichia coli 53638]
gi|193066079|ref|ZP_03047136.1| mce-related protein [Escherichia coli E22]
gi|209919200|ref|YP_002293284.1| hypothetical protein ECSE_2009 [Escherichia coli SE11]
gi|293415149|ref|ZP_06657792.1| yebT protein [Escherichia coli B185]
gi|331653240|ref|ZP_08354245.1| mce related protein [Escherichia coli M718]
gi|331668526|ref|ZP_08369374.1| mce related protein [Escherichia coli TA271]
gi|157066981|gb|ABV06236.1| mce-related protein [Escherichia coli HS]
gi|188490184|gb|EDU65287.1| mce-related protein [Escherichia coli 53638]
gi|192926316|gb|EDV80953.1| mce-related protein [Escherichia coli E22]
gi|209912459|dbj|BAG77533.1| conserved hypothetical protein [Escherichia coli SE11]
gi|291432797|gb|EFF05776.1| yebT protein [Escherichia coli B185]
gi|323937092|gb|EGB33372.1| hypothetical protein ERCG_01660 [Escherichia coli E1520]
gi|323961888|gb|EGB57487.1| hypothetical protein ERGG_01573 [Escherichia coli H489]
gi|323972659|gb|EGB67862.1| hypothetical protein ERHG_01402 [Escherichia coli TA007]
gi|331049338|gb|EGI21410.1| mce related protein [Escherichia coli M718]
gi|331063720|gb|EGI35631.1| mce related protein [Escherichia coli TA271]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|117623990|ref|YP_852903.1| hypothetical protein APECO1_888 [Escherichia coli APEC O1]
gi|115513114|gb|ABJ01189.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|323952335|gb|EGB48208.1| hypothetical protein ERKG_01286 [Escherichia coli H252]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|241764468|ref|ZP_04762490.1| Mammalian cell entry related domain protein [Acidovorax delafieldii
2AN]
gi|241366103|gb|EER60694.1| Mammalian cell entry related domain protein [Acidovorax delafieldii
2AN]
Length = 333
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
S +L + P +++ S +G+ + F+G P+GR+ + L ++
Sbjct: 41 IVGSGLYLLYARGAFEPTQTLVLTADDS-EGVVVGMDMTFSGFPIGRVRRIELSEDGNAR 99
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ ++ L S+ T+ +G+ G T I + + A
Sbjct: 100 IVVDVPLKDAHWLRQSSVFTLV-RGVVGGTNIRAYSGMLSDPILPAGAVRP 149
>gi|15828396|ref|NP_302659.1| putative secreted protein [Mycobacterium leprae TN]
gi|221230873|ref|YP_002504289.1| putative secreted protein [Mycobacterium leprae Br4923]
gi|13093826|emb|CAC32124.1| putative secreted protein [Mycobacterium leprae]
gi|219933980|emb|CAR72692.1| putative secreted protein [Mycobacterium leprae Br4923]
Length = 531
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/322 (8%), Positives = 86/322 (26%), Gaps = 12/322 (3%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
Y ++ + L T V+ G+ VG I + + +
Sbjct: 37 GWRLYQKLTNNTVVVYFPAATALYTGDKVQIMGLRVGSIDSIVPAGD---KMKVTFHYQN 93
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ + +A I L I+L K + A +R + P +
Sbjct: 94 KYKVPANASAVILNPTLVASRSIQLEPPYKGGPALGDNAVIPLERTQV---PVEWDELRD 150
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ K+ + + ++ + +A +++S ++ +
Sbjct: 151 SITKIISKLGPTKEQPKGPFGDVIESFADGLAGKGKQINATLDSLSRALTALNEGRGDFF 210
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ L + + + + +++ S + +
Sbjct: 211 A------VLRSLALFVNALHTDDQQFVALNQNLADFTTRLAHSDTDLSSALQQFNSMLST 264
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ + + +++ ++ + L + ++ + + ++ +
Sbjct: 265 VQSFLVKNREVLAADVNNLATVNNTVVQPEPLNGVETFLHVAPTAAANMNQLYHPAHGSV 324
Query: 330 STINTIENITSNLNDSSQKFAE 351
+ TI N + +
Sbjct: 325 VGVPTITNFANPMQFICSAIQA 346
>gi|145589751|ref|YP_001156348.1| hypothetical protein Pnuc_1570 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048157|gb|ABP34784.1| Mammalian cell entry related domain protein [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 538
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/394 (10%), Positives = 118/394 (29%), Gaps = 36/394 (9%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
+ + V F I VG+++ LD++ + I + P R +GI
Sbjct: 181 NVGTPVYFRRISVGQVIANDLDKDGKS---VSIKIFINAPYDQYVINNTRFWNASGIDVT 237
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
++ + + IA A + ++ S + + +
Sbjct: 238 VNASGVQLQTE-SLIAVIAGGIAFEAPQRHTDPQNLIAGDDKQSDSSGLPKEGNLLSDRA 296
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ T+ + I+ + + + K++ ++ + +
Sbjct: 297 KADTVFTLFDTRLIAMKQPD-----------LRSQRFVINFKSSVRGLSVGAPVEFRGMN 345
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
++ + ++ + V+ +T + +I+ L + M
Sbjct: 346 FGEVVNIETAMDPKTLEIIQPVEIFLYPDRLQVRSIKTGKILPPPTNEIERLQALIKKGM 405
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+++ + I + + I + L+D + +
Sbjct: 406 RAQLLTGSFLTGQKYIG-----IDIFPNAPKYTLDLSRNPLELPAIPNELDDVEKSLTSV 460
Query: 353 MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
+ + + + + + F T + +N + + L D+++ +
Sbjct: 461 IKNTDKLVKKLD--------NQIIPQFDKTLKNVN--------TMTDGDSPLLIDMRDSL 504
Query: 413 RKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
R++ + N + ++ PQ I++G+ K
Sbjct: 505 REITKAANSVKTLTDMLDQQPQSIIYGKPTQESK 538
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
+I SV GLS + V F G+ G +V +
Sbjct: 318 RSQRFVINFKSSVRGLSVGAPVEFRGMNFGEVVNIE 353
>gi|330991778|ref|ZP_08315728.1| Paraquat-inducible protein B [Gluconacetobacter sp. SXCC-1]
gi|329761246|gb|EGG77740.1| Paraquat-inducible protein B [Gluconacetobacter sp. SXCC-1]
Length = 554
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/416 (10%), Positives = 129/416 (31%), Gaps = 30/416 (7%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP--D 90
+ D P + I S+ L + + F + VG ++G + E + ++ D
Sbjct: 161 RSDQPGHTYTL-ITQSLGSLGQGAPIFFRDVVVGEVLGYTMPPEGRGPIRVQIFVQAPYD 219
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
L +T + G+ L + + + + +
Sbjct: 220 HYLRTNTRFWNVSGVQVGLGPGGLKIKLQSLQALLSGGV-------------AFDPPDAR 266
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
E + + S ++ ++ E+ + + T + +++S + + T
Sbjct: 267 NEKNTLPATAGSDTTFQLYDSAEEANSAGYRERIPLVTYITSSVSGLTRGGRLTMFGIQV 326
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + + + + + ++ + + V+ T
Sbjct: 327 GMIDDVRLQVDPASGRARVRVAMELQPERVLDNQQVSPAALAELLRTQVADGLRASVQST 386
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ E + + + ++++ + + L A + + S+S + +
Sbjct: 387 SMLTGESEIALTFVRNAKPAQVQMEGDAMVLPGQAGGMAGIMDSLSVVSDKIAAMP---- 442
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQ----RAMHTFRDTSEKI 386
+ + NLN ++ + AL S ++ Q A +
Sbjct: 443 ----LTQMGENLNSLLAHADARINSPDTKQALTALRSSLQNLQVISHDARSEMPQLLSGM 498
Query: 387 NRYIPSIGNNLQNFSQSG--LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++ + S + L ++ ++Q ++++L + + +P ++ GR
Sbjct: 499 DKTLKSANSVLSSYGGDTDFQRNLQQMMQQLNDAARSLRFLSDFLTHHPSALITGR 554
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 49/489 (10%), Positives = 130/489 (26%), Gaps = 56/489 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ Y SV V + + W + + +I+ + DGL++ + V+
Sbjct: 20 RKYRFSVVWLVPIVALLIAGYLGWKGITGRG-----PLIVITFDTADGLTSGQTEVKNKA 74
Query: 63 IPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ +G + + L + + + L + + G + L T+
Sbjct: 75 VSLGTVDSIRLSDDFHHVEVRVRMTSAAGRMLTDHARFWVVRPRINGASVTGLETVMSGA 134
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ T ++ + ++ + + + +
Sbjct: 135 YIAMDAGEPGGR--YTTRFTGLEAPPGVRSDQPGHTYTLITQSLGSLGQGAPIFFRDVVV 192
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
T+ I + H + F ++ + L I LQ +
Sbjct: 193 GEVLGYTMPPEGRGPIRVQIFVQAPYDHYLRTNTRFWNVSGVQVGLGPGGLKIKLQSLQA 252
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD-------FSSKMKS 294
+L ++ + T Q + + + +S +
Sbjct: 253 LLSGGVAFDPPDARNEKNTLPATAGSDTTFQLYDSAEEANSAGYRERIPLVTYITSSVSG 312
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
L + + + + + ++ E + N S AEL+
Sbjct: 313 LTRGGRLTMFGIQVGMIDDVRLQVDPASGRARVRVAMELQPERVLDNQQVSPAALAELLR 372
Query: 355 K--INNISALKENNSLF--------------------------------KDAQRAMHTFR 380
+ + A ++ S+ M +
Sbjct: 373 TQVADGLRASVQSTSMLTGESEIALTFVRNAKPAQVQMEGDAMVLPGQAGGMAGIMDSLS 432
Query: 381 DTSEKINRY-IPSIGNNLQNF-----SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
S+KI + +G NL + ++ D + + L+ ++ + ++
Sbjct: 433 VVSDKIAAMPLTQMGENLNSLLAHADARINSPDTKQALTALRSSLQNLQVISHDARSEMP 492
Query: 435 DIVWGREKG 443
++ G +K
Sbjct: 493 QLLSGMDKT 501
>gi|118470324|ref|YP_890126.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118171611|gb|ABK72507.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 400
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 78/290 (26%), Gaps = 22/290 (7%)
Query: 1 MES---KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STD 55
M + K + + V++++ + +LS + + P +V + P GL D
Sbjct: 1 MSNGNAKRSHVRIAAAVLALIVLAAVVFTYLSYTAAF-TPTDKVTVTAPR--AGLVMERD 57
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
+ V++ GI +G++ + + + + + T I + G +E
Sbjct: 58 AKVKYRGIQIGKVTDIEYAG---REAKLTLSLNRGEMQYIPSNATVRIAGNTIFGAKSVE 114
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ +N + KI + +
Sbjct: 115 FLP----PEKATDTPLRPGTSVPAQDVQLEVNTLFQTLSDLLDKIDPV-----SLNGTLT 165
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + + LA + + ++ I +
Sbjct: 166 ALGEGLRGHGDDLGATLAGLNTLLGQLNPKLPTLQDDFSKAAVVAGIYGDAGPDIATVLD 225
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
I++ + + ++ N ++ + Q++
Sbjct: 226 NVPGVNQTIIDEQANLNATLLAATGLANNGTATLQPAADDYIAAVQRLRA 275
>gi|84494803|ref|ZP_00993922.1| putative mce-related protein [Janibacter sp. HTCC2649]
gi|84384296|gb|EAQ00176.1| putative mce-related protein [Janibacter sp. HTCC2649]
Length = 400
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/304 (13%), Positives = 90/304 (29%), Gaps = 8/304 (2%)
Query: 10 VGLFVVSILFFS---FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
V L VV L S L + +GP V + V L S+V+ N + VG
Sbjct: 11 VALAVVVTLTLSSCNGAFDLPLPGGAKGEGPSMRVKVDF-ADVLDLVPKSAVKINEVSVG 69
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ + L+ + I + L + TA ++ L G YI LS K
Sbjct: 70 QVEDIELNG---WTARVTLSIPKSSKLPDNATAELKQTSLLGEKYISLSGPADGKGVGTL 126
Query: 127 IATERNQRAMITATPSGINY-FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ P + I+ + +++ + I
Sbjct: 127 SDGDLIPLDRTNRNPEVEEVLSAMSLLLNGGGIAQLAVIEKELNNALRGNTDEIKHLIGQ 186
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
++T + +++ S + + + Q+ +
Sbjct: 187 LNTFIGGLEDQKGEIVRAIDAVDQLSAKLAAQKELIGKTLEELPKGLKVLADQRIQLTQM 246
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+Q S + + + D+ + + +++ ++ T F + +
Sbjct: 247 LQALSRLGAVGTKVIQGSKVDMLANLKLLAPILTQLNAAGDALPQSLEILLTYPFPDKML 306
Query: 306 DSTS 309
++
Sbjct: 307 EAIK 310
>gi|332096558|gb|EGJ01552.1| hypothetical protein SB359474_1389 [Shigella boydii 3594-74]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRSNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|330911642|gb|EGH40152.1| paraquat-inducible protein B [Escherichia coli AA86]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + +K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEQKEWRE 872
>gi|331657879|ref|ZP_08358841.1| mce related protein [Escherichia coli TA206]
gi|331056127|gb|EGI28136.1| mce related protein [Escherichia coli TA206]
Length = 612
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
>gi|331683338|ref|ZP_08383939.1| mce related protein [Escherichia coli H299]
gi|284921752|emb|CBG34825.1| conserved hypothetical protein [Escherichia coli 042]
gi|331079553|gb|EGI50750.1| mce related protein [Escherichia coli H299]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|187732819|ref|YP_001880633.1| mce-related protein [Shigella boydii CDC 3083-94]
gi|187429811|gb|ACD09085.1| mce-related protein [Shigella boydii CDC 3083-94]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRSNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|320183015|gb|EFW57881.1| Paraquat-inducible protein B [Shigella flexneri CDC 796-83]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRSNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|218689771|ref|YP_002397983.1| hypothetical protein ECED1_2038 [Escherichia coli ED1a]
gi|218427335|emb|CAR08230.2| conserved hypothetical protein [Escherichia coli ED1a]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|82543758|ref|YP_407705.1| hypothetical protein SBO_1249 [Shigella boydii Sb227]
gi|81245169|gb|ABB65877.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRSNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|284034018|ref|YP_003383949.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
gi|283813311|gb|ADB35150.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
Length = 415
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 6 YYTSVGLFVVSILFFSFFSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
G+ ++ L + L + GP V + V L S+V+ +
Sbjct: 10 TAIVAGVVALATLVSGCDFSVYSLPLPGGAKIKGPSYTVTVEFTD-VLDLVPKSTVKVDD 68
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ VG + ++LD + K + L + ATIR L G +
Sbjct: 69 VTVGTVEKVWLDG---YVAKVKVKLPKSLELPDNARATIRQTSLLGEKF 114
>gi|153947481|ref|YP_001401514.1| paraquat-inducible protein B [Yersinia pseudotuberculosis IP 31758]
gi|162419966|ref|YP_001606463.1| paraquat-inducible protein B [Yersinia pestis Angola]
gi|165924759|ref|ZP_02220591.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165938913|ref|ZP_02227466.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010302|ref|ZP_02231200.1| paraquat-inducible protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166211810|ref|ZP_02237845.1| paraquat-inducible protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167399803|ref|ZP_02305321.1| paraquat-inducible protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419525|ref|ZP_02311278.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167424147|ref|ZP_02315900.1| paraquat-inducible protein B [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|167470421|ref|ZP_02335125.1| paraquat-inducible protein B [Yersinia pestis FV-1]
gi|170024863|ref|YP_001721368.1| paraquat-inducible protein B [Yersinia pseudotuberculosis YPIII]
gi|186894866|ref|YP_001871978.1| paraquat-inducible protein B [Yersinia pseudotuberculosis PB1/+]
gi|229841397|ref|ZP_04461556.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843503|ref|ZP_04463649.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. India 195]
gi|229895877|ref|ZP_04511047.1| paraquat-inducible protein B [Yersinia pestis Pestoides A]
gi|229903117|ref|ZP_04518230.1| paraquat-inducible protein B [Yersinia pestis Nepal516]
gi|270486914|ref|ZP_06203988.1| paraquat-inducible protein B family protein [Yersinia pestis KIM
D27]
gi|294503408|ref|YP_003567470.1| paraquat-inducible protein B [Yersinia pestis Z176003]
gi|152958976|gb|ABS46437.1| paraquat-inducible protein B [Yersinia pseudotuberculosis IP 31758]
gi|162352781|gb|ABX86729.1| paraquat-inducible protein B [Yersinia pestis Angola]
gi|165913060|gb|EDR31684.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. IP275]
gi|165923819|gb|EDR40951.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165990788|gb|EDR43089.1| paraquat-inducible protein B [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166207581|gb|EDR52061.1| paraquat-inducible protein B [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962266|gb|EDR58287.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167050511|gb|EDR61919.1| paraquat-inducible protein B [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056996|gb|EDR66759.1| paraquat-inducible protein B [Yersinia pestis biovar Mediaevalis
str. K1973002]
gi|169751397|gb|ACA68915.1| Mammalian cell entry related domain protein [Yersinia
pseudotuberculosis YPIII]
gi|186697892|gb|ACC88521.1| Mammalian cell entry related domain protein [Yersinia
pseudotuberculosis PB1/+]
gi|229678887|gb|EEO74990.1| paraquat-inducible protein B [Yersinia pestis Nepal516]
gi|229689850|gb|EEO81911.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697763|gb|EEO87810.1| paraquat-inducible protein B [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229700800|gb|EEO88829.1| paraquat-inducible protein B [Yersinia pestis Pestoides A]
gi|262361451|gb|ACY58172.1| paraquat-inducible protein B [Yersinia pestis D106004]
gi|262365015|gb|ACY61572.1| paraquat-inducible protein B [Yersinia pestis D182038]
gi|270335418|gb|EFA46195.1| paraquat-inducible protein B family protein [Yersinia pestis KIM
D27]
gi|294353867|gb|ADE64208.1| paraquat-inducible protein B [Yersinia pestis Z176003]
Length = 550
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/412 (8%), Positives = 100/412 (24%), Gaps = 38/412 (9%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 167 SDQAGQLNAGDPVLFRGYRVGSVETSTFDPQSR---------------------LMRYQL 205
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK-----ISD 160
G Y L T +A + + + M S F
Sbjct: 206 FIGAPYDSLVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPV 265
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + + ++ + ++ + + +
Sbjct: 266 TQDKAEFKLFDDRSSIQNSLYIEHENFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFF 325
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + I + + + +R + ++ +
Sbjct: 326 AEGMKQQVDNDFRIPVLIRIEPGRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTG- 384
Query: 281 IDHLLSDFSSKMKS-KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
L D + + ++ I++ Q I+ + +
Sbjct: 385 --ALFVDLDFYPDAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNP-MV 441
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + + + + M + + A + + Q + T ++NR +
Sbjct: 442 NEVTKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKTLNELNRSMKGFQP---- 497
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + +++L + + L +V+ E + +PK
Sbjct: 498 -GSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 546
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 78/283 (27%), Gaps = 23/283 (8%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ SV GL + + V F GI VG + + E + D +
Sbjct: 288 EHENFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFFAEGMKQ-----QVDNDFRIP-- 340
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
IR + + + + + + A ER RA + + + +
Sbjct: 341 --VLIRIEP---GRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLDFYP- 394
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ TIS LA + + + P +
Sbjct: 395 ----------DAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNPMVNEV 444
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + ++ + K + +++Q + K+ +++ ++ + + + +
Sbjct: 445 TKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKTLNELNRSMKGFQPGSPAYNK 504
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + L T N + +
Sbjct: 505 MVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKK 547
>gi|320177051|gb|EFW52071.1| Paraquat-inducible protein B [Shigella dysenteriae CDC 74-1112]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRSNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|308380916|ref|ZP_07491474.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu011]
gi|308360105|gb|EFP48956.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu011]
Length = 450
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|300994214|ref|ZP_07180771.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301050817|ref|ZP_07197671.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300297506|gb|EFJ53891.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300406342|gb|EFJ89880.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|315290363|gb|EFU49739.1| conserved hypothetical protein [Escherichia coli MS 153-1]
Length = 877
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|270261229|ref|ZP_06189502.1| paraquat-inducible protein B [Serratia odorifera 4Rx13]
gi|270044713|gb|EFA17804.1| paraquat-inducible protein B [Serratia odorifera 4Rx13]
Length = 500
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/398 (8%), Positives = 92/398 (23%), Gaps = 25/398 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L+ V F G VG + + D + + + P T+ +R +G+ +
Sbjct: 124 LNAGDPVLFRGYRVGSVETSYFDPKMRA---MRYQLFISAPYDQLVTSNVRFWKDSGVAF 180
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + E S + +
Sbjct: 181 DMSAQGMRVEMGSLATLFSGGVSFDVPEGWDRGEQVKEKTEYELFDNQRSIQDSLYTVHK 240
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + S + + + ++
Sbjct: 241 DYLMF----------FSDSIRGLQPGAPVEFRGIRLGTVSQVPFYKKGMMQRLDNDYRIP 290
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
I ++ + + ++ + +D + + K
Sbjct: 291 VLIRIEPDRFQKQLGGDFDIEGHLKDAEARGMRASLKSANLLTGSLYIDLDFYPQEKAWK 350
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L + IN + + Q +
Sbjct: 351 GPRELFGYPLMPTTSGGLAQIQQKLMQTLDKINSLPLNPMINEATKTLAESQKTMQSTQK 410
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
+ +N+I A KE +L +D Q+ + + + N +
Sbjct: 411 TIQSLNDIIASKEMKALPQDMQKTLQELNRSVKGFQP------------GSPAYNKMVGD 458
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+++L + + L +V+ + K
Sbjct: 459 MQRLDQVLRELQPVLRTLNEKSNALVFEAAGSNDPQPK 496
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/273 (12%), Positives = 86/273 (31%), Gaps = 27/273 (9%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHSLAKALIRPDTPL 93
++ S+ GL + V F GI +G + + + + I PD
Sbjct: 242 YLMFFSDSIRGLQPGAPVEFRGIRLGTVSQVPFYKKGMMQRLDNDYRIPVLIRIEPD--- 298
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ + + + + A R RA + + + +
Sbjct: 299 ----------------RFQKQLGGDFDIEGHLKDAEARGMRASLKSANLLTGSLYIDLDF 342
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
++ + + + +A I+ + I+ + + T ++S
Sbjct: 343 YPQE-KAWKGPRELFGYPLMPTTSGGLAQIQQKLMQTLDKINSLPLNPMINEATKTLAES 401
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ T + I SL+ +I + +++ + Q ++ N VK + + Q
Sbjct: 402 QKTMQSTQKTIQSLNDIIASKEMKALPQDMQKTLQELNRSVKGFQPGSPAYNKMVGDMQR 461
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+V +++ +L + K + A N
Sbjct: 462 LDQVLRELQPVLRTLNEKSNALVFEAAGSNDPQ 494
>gi|227885739|ref|ZP_04003544.1| paraquat-inducible protein B [Escherichia coli 83972]
gi|227837312|gb|EEJ47778.1| paraquat-inducible protein B [Escherichia coli 83972]
Length = 879
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|226361932|ref|YP_002779710.1| Mce family protein [Rhodococcus opacus B4]
gi|226240417|dbj|BAH50765.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 382
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/298 (11%), Positives = 90/298 (30%), Gaps = 12/298 (4%)
Query: 10 VGLFVVSILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+GL + + S W L + V I++P +V + +S VR +
Sbjct: 12 IGLALTGLSAALLTSCGWEGANSLPLPGTEGSGEGSYTVTIQMP-NVTSIQRNSRVRVHD 70
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L H+L + L + TA I L G ++EL+ E
Sbjct: 71 VTVGNVTDVQLQ---DWHALVTVRLDGGVALPKNATAKIGQTSLLGSLHVELAEPLDEAP 127
Query: 123 TIFQIATERNQRAMITATP-SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + P + + + ++ + +
Sbjct: 128 SGSLGDGDTIPLDHADQYPTTEQTLAAVSVVLNGGGLGQLQEIDTQLNAALGGRESDVRT 187
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + T + + D ++ + + + N + ++ +
Sbjct: 188 FLTQLDTFTSALNTQKDDILTALEGLDRLALTANEQTQTLESALERIPPAIETLNRQKDN 247
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ ++ N ++ V D+++ + +++ + + + T
Sbjct: 248 LTGSVTSVGNFADVANRTVTAGSEDIQQNLRDLAPTLRELANAGPGLAGSLGMLPTFP 305
>gi|308371609|ref|ZP_07425482.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu004]
gi|308336195|gb|EFP25046.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu004]
Length = 460
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|254392563|ref|ZP_05007741.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|197706228|gb|EDY52040.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 374
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/263 (8%), Positives = 68/263 (25%), Gaps = 13/263 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V G+ S VR G+ G + + + L+ +
Sbjct: 36 RATRVTAYFTR-ATGVYEGSDVRILGVRAGTVDAVEPVGD---RVRVTLLVDDGIEVPRD 91
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A + + Y++L+ + A +R + P ++ ++ +
Sbjct: 92 AHAVVVAPSVVADRYVQLAPAYTGGPRLTDGAVLPAERNAL---PMEVDQLYASLTELTT 148
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + + + + + + + + SS T
Sbjct: 149 ALGPEGANADGALTRLLAVGAENLDGNGRAIGDSIDQFARAARTL------DRSSGDLFT 202
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
T++ + ++ Q+ +++ S + +R +E
Sbjct: 203 TLEHLQTFTAMLQRNDRTVVRAERQLAAVTGFLADDKENLSAALRELGTALRLVKSFIEE 262
Query: 277 VGQKIDHLLSDFSSKMKSKETSA 299
+ + D ++
Sbjct: 263 NRDGLRESVDDLVPLTRALVDQR 285
>gi|22126625|ref|NP_670048.1| paraquat-inducible protein B [Yersinia pestis KIM 10]
gi|45440999|ref|NP_992538.1| paraquat-inducible protein B [Yersinia pestis biovar Microtus str.
91001]
gi|108806713|ref|YP_650629.1| paraquat-inducible protein B [Yersinia pestis Antiqua]
gi|108812717|ref|YP_648484.1| paraquat-inducible protein B [Yersinia pestis Nepal516]
gi|145599546|ref|YP_001163622.1| paraquat-inducible protein B [Yersinia pestis Pestoides F]
gi|21959635|gb|AAM86299.1|AE013877_7 paraquat-inducible protein B [Yersinia pestis KIM 10]
gi|45435858|gb|AAS61415.1| paraquat-inducible protein B [Yersinia pestis biovar Microtus str.
91001]
gi|108776365|gb|ABG18884.1| paraquat-inducible protein B [Yersinia pestis Nepal516]
gi|108778626|gb|ABG12684.1| putative paraquat-inducible protein B [Yersinia pestis Antiqua]
gi|145211242|gb|ABP40649.1| paraquat-inducible protein B [Yersinia pestis Pestoides F]
Length = 559
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/412 (8%), Positives = 100/412 (24%), Gaps = 38/412 (9%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 176 SDQAGQLNAGDPVLFRGYRVGSVETSTFDPQSR---------------------LMRYQL 214
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK-----ISD 160
G Y L T +A + + + M S F
Sbjct: 215 FIGAPYDSLVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLEQGKPV 274
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + + ++ + ++ + + +
Sbjct: 275 TQDKAEFKLFDDRSSIQNSLYIEHENFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFF 334
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + I + + + +R + ++ +
Sbjct: 335 AEGMKQQVDNDFRIPVLIRIEPGRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTG- 393
Query: 281 IDHLLSDFSSKMKS-KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
L D + + ++ I++ Q I+ + +
Sbjct: 394 --ALFVDLDFYPDAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNP-MV 450
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + + + + M + + A + + Q + T ++NR +
Sbjct: 451 NEVTKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKTLNELNRSMKGFQP---- 506
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + +++L + + L +V+ E + +PK
Sbjct: 507 -GSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 555
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 31/283 (10%), Positives = 78/283 (27%), Gaps = 23/283 (8%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ SV GL + + V F GI VG + + E + D +
Sbjct: 297 EHENFLLFFSDSVRGLQSGAPVEFRGIRVGTVGDVPFFAEGMKQ-----QVDNDFRIP-- 349
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
IR + + + + + + A ER RA + + + +
Sbjct: 350 --VLIRIEP---GRFRDDLGPDTNFEQVLKTAKERGLRASLKSGNLLTGALFVDLDFYP- 403
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ TIS LA + + + P +
Sbjct: 404 ----------DAKPWKGPQEIAGYPLLPTISGGLAQIQQKVMQTLDKINNLPLNPMVNEV 453
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + ++ + K + +++Q + K+ +++ ++ + + + +
Sbjct: 454 TKALAESQKTMRETQKVLASLNTITSSQSMQELPKDLQKTLNELNRSMKGFQPGSPAYNK 513
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + L T N + +
Sbjct: 514 MVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKK 556
>gi|260186937|ref|ZP_05764411.1| MCE-family protein mce3A [Mycobacterium tuberculosis CPHL_A]
gi|289447583|ref|ZP_06437327.1| MCE-family protein mce3A [Mycobacterium tuberculosis CPHL_A]
gi|289420541|gb|EFD17742.1| MCE-family protein mce3A [Mycobacterium tuberculosis CPHL_A]
Length = 425
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 13 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLTADRSGLVMDSGAKVMMRG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE-LSTLRK 119
+ VGR+ + + N + + I PD + + A I G +++ +
Sbjct: 66 VQVGRVAQIGRIEWAQNGASLRLEIDPDQIRYIPANVEAQISATTAFGAKFVDLVMPQNP 125
Query: 120 EKKTIFQIAT 129
+ + A
Sbjct: 126 SRARLSAGAV 135
>gi|11465838|ref|NP_053982.1| ORF22 [Porphyra purpurea]
gi|1723326|sp|P51372|YCF22_PORPU RecName: Full=Uncharacterized protein ycf22
gi|1276838|gb|AAC08258.1| hypothetical chloroplast ORF 22 [Porphyra purpurea]
Length = 209
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/98 (19%), Positives = 38/98 (38%), Gaps = 5/98 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ F W + +V + S G+ +SVR G+P+G++VG+
Sbjct: 17 FLGIVALFSLTIWHVINRTSKNKSYKVFVEF-DSAYGIQEGTSVRLRGLPIGKVVGIS-- 73
Query: 75 QEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITY 111
+ + L + I+ +T + ++ GL T
Sbjct: 74 -QSSHSILTRIEIQSCNTIIPKTSLIETNQTGLLNDTI 110
>gi|297191132|ref|ZP_06908530.1| virulence factor Mce family protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721745|gb|EDY65653.1| virulence factor Mce family protein [Streptomyces pristinaespiralis
ATCC 25486]
Length = 424
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/284 (11%), Positives = 82/284 (28%), Gaps = 7/284 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L DG V V L S+V+ N + VG + + L H+ + I
Sbjct: 25 LPGGAAADGNAYHVTADF-RDVLDLVPQSAVKVNNVTVGAVEKVELVG---WHARVRLRI 80
Query: 88 RPDTPLYPSTTATIRTQGLAGITYI--ELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
D L + A +R + G Y+ + + A R
Sbjct: 81 ADDVKLPGNAVAELRQTSMLGEKYVALSPPVGVEASGRLTDGARIPLSRTGRNP-EIEEV 139
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+A ++ ++ + +E + + T + +++ +
Sbjct: 140 LSALSALLNGGGVAQLKTITVELNKALEGRENRVKELLGELDTFIGGLDKQRKEIVRALR 199
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + + + + + + S + + +
Sbjct: 200 GIDRLAKRLASEKKTIAQAVDTVPGALKVLADQRSNLTAMLTSLSELGKTGTKVINTSRA 259
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
D ++ Q + Q+++ SD + ++ T F N+ +
Sbjct: 260 DTVANLKSLQPILQQLNKAGSDLPNSLELLTTYPFPRNVTGAIK 303
>gi|118472305|ref|YP_884550.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118173592|gb|ABK74488.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 409
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 37/110 (33%), Gaps = 9/110 (8%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS--TDSSVRFNGIP 64
Y GL + L + ++ + GLS S V FNG+P
Sbjct: 19 YKLAGL--ILGLVGVLVLALTWMQFRGQFEDKVQLTVLSGR--AGLSMDPGSKVTFNGVP 74
Query: 65 VGRIVGLFLDQ-EYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
+GR+ + + + + + + P + + +R + G Y
Sbjct: 75 IGRLASIDVVEVDDNPEARLTLDVDPKYLDLIPENANVELRATTVFGNKY 124
>gi|269128023|ref|YP_003301393.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268312981|gb|ACY99355.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 358
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 40/132 (30%), Gaps = 2/132 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+ + + S ++ + V L+ SV+ + + VG + + L
Sbjct: 4 TLILTLAAVLLATGCSVRTFGAPKGGLTLVAVFDDVQQLTVGHSVQLSDVKVGSVTDVKL 63
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ I + T+A I+ L G ++EL + ++
Sbjct: 64 V--SGYKAEVTMSIVDGHRIPQGTSAEIKVTSLLGENFVELRLPPGRDMSTGPFLRSGDR 121
Query: 134 RAMITATPSGIN 145
+ PS
Sbjct: 122 ITQTSTQPSFEQ 133
>gi|308379714|ref|ZP_07487256.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu010]
gi|308356150|gb|EFP45001.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu010]
Length = 481
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|254233560|ref|ZP_04926886.1| MCE-family protein mce1C [Mycobacterium tuberculosis C]
gi|124603353|gb|EAY61628.1| MCE-family protein mce1C [Mycobacterium tuberculosis C]
Length = 519
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|145221306|ref|YP_001131984.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213792|gb|ABP43196.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 405
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K Y G VV L + + P ++ + S L + S V
Sbjct: 5 MNTKRQPPYKIAG--VVLALVTILILVLVYLQFRGDFLPRTQLTMISARSGLSLDSGSKV 62
Query: 59 RFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
FNG+ +G++ + + + P + + A I + G Y
Sbjct: 63 TFNGVEIGKVSEVEETTVGGEPRAKILLEVNPKYLKLIPRNVNADISATTVFGNKY 118
>gi|319950496|ref|ZP_08024409.1| Mce family protein Mce4D [Dietzia cinnamea P4]
gi|319435855|gb|EFV91062.1| Mce family protein Mce4D [Dietzia cinnamea P4]
Length = 409
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/258 (11%), Positives = 74/258 (28%), Gaps = 11/258 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ +V G+S S VR G+ VG + + E + +R +
Sbjct: 32 GRTTITATFSTAV-GISEGSDVRILGVTVGSVDKVTPMGET---VEVELHVRRGVDVPAD 87
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
A T + ++L + A +R ATP ++ ++ E +
Sbjct: 88 AKAIQVTPSVVPDRNVQLLPAYSGGPKMESGAHIPLERT---ATPVEVDELYASVEGLTD 144
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + ++ T+ + +S + + +
Sbjct: 145 ALGPEGANKDGALDRFVTASADTLGGNGAALGRSIDELSQAATTLADSSQDISETVVNLQ 204
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQIL----ENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ NQ + E++Q + + V V D ++ +
Sbjct: 205 SFVTMLAQNDAQVRQFNSQMSSFNQTVAGQREDLQGALAELSYALADVARLVRDNQDVIR 264
Query: 273 TFQEVGQKIDHLLSDFSS 290
+ + ++ + +D
Sbjct: 265 SNADRLVRLSQITADQRD 282
>gi|118616797|ref|YP_905129.1| MCE-family protein Mce1C [Mycobacterium ulcerans Agy99]
gi|118568907|gb|ABL03658.1| MCE-family protein Mce1C [Mycobacterium ulcerans Agy99]
Length = 521
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 78/249 (31%), Gaps = 5/249 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S G++ VR G+ VG++ GL +D + H + K I +T + + +
Sbjct: 42 YYGQFTDS-GGINNGDKVRIAGLDVGKVEGLRIDGD---HIVMKFSIGTNT-IGTDSRLS 96
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + +
Sbjct: 97 IRTDTILGKKVVEIEARGNQPLRPGGTLPLGQSTTPYQIYDAFFDVTRAATGWDIDTVKK 156
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + I+ L++ + + S L + ++ + ++
Sbjct: 157 SLHVLSETIDQTYPHLSSALDGVAKFSDTLGKRDDELKHLLAQANQVASALGDRSAQVDR 216
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + ++ +L NI S + N H + + + ++
Sbjct: 217 LLVNAKTLLVAFNERGRAIDALLGNIASFSAQVQGLINDNPNLNHVLEQLRTVSDVLIER 276
Query: 281 IDHLLSDFS 289
+ L
Sbjct: 277 KEDLAKGLE 285
>gi|330721189|gb|EGG99300.1| Uncharacterized ABC transporter2C periplasmic component YrbD [gamma
proteobacterium IMCC2047]
Length = 152
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 2/134 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK +VGLF+++ + +S + I ++ GL+ S V
Sbjct: 1 MHSKTLEVAVGLFMLAGMASLIVLALNVSGLTFSGAKDSYTIYAAFENIGGLTARSKVTV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+VG+ LD++ + + I D TTA I T GL G YI L +
Sbjct: 61 AGVGVGRVVGITLDKDDFSGI-VEMEIEADYNQFTTDTTAAILTAGLLGEKYIGLISGAD 119
Query: 120 EKKTIFQIATERNQ 133
++ + Q
Sbjct: 120 DEYLVEGDMIIDTQ 133
>gi|261821347|ref|YP_003259453.1| paraquat-inducible protein B [Pectobacterium wasabiae WPP163]
gi|261605360|gb|ACX87846.1| Mammalian cell entry related domain protein [Pectobacterium
wasabiae WPP163]
Length = 546
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/404 (10%), Positives = 109/404 (26%), Gaps = 35/404 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L+ V F G VG + D + +R Q Y
Sbjct: 171 LNAGDPVLFRGYRVGSVETSEFDPKARK---------------------MRYQLFISAPY 209
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L T +A + + + M S F +
Sbjct: 210 DGLITSNVRFWKDSGVAFDMSAQGMRVEMGSLTTLFSGGVSFDVPAGWELGD-------- 261
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
K + S + + + ++ ++ L T +
Sbjct: 262 AAKAMAQYRLFDSQRSIQDSLYTEYKEYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPF 321
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++++ I V ++ I D + + Q +G + ++ +
Sbjct: 322 FPKNMKQELDDDYRIPVLIRIEPDRFEKKIGGSFDFEQHLKQAQPLGLRASMKSANLLTG 381
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + D + + I +I + + + +NL +
Sbjct: 382 ALYIDLDFYPQEKGDKKLYVLDGYPILPTIDGGLSQIQQKLMAVLDKVNNLPLNPMVNEA 441
Query: 352 LMSKINNISALKENNSLFKDAQRAMHT--FRDTSEKINRYIPSIGNNLQNF--SQSGLND 407
+ + + L+E + + +D E + + + + +++ F N
Sbjct: 442 TKTLTESQATLREMQKTLATLNKLTSSKAMQDLPEDMQKTLLELNRSMKGFQPGSPAYNK 501
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ +++L + + L +V+ E + +PK
Sbjct: 502 MVADMQRLDQVLRELQPVLRTLNEKSNALVF--EAPGNQDPQPK 543
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/291 (9%), Positives = 79/291 (27%), Gaps = 23/291 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + E ++ S+ GL + V F GI +G + + +
Sbjct: 277 SIQDSLYTEYKEYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPFFPKNMKQ-----ELD 331
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + + + + A RA + +
Sbjct: 332 DDYRIP----VLIRIEP---DRFEKKIGGSFDFEQHLKQAQPLGLRASMKSANLLTGALY 384
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + ++ D ++ + + + ++ P
Sbjct: 385 IDLDFYPQEKGDKKLYVLDGYPILPTIDGGL-----------SQIQQKLMAVLDKVNNLP 433
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ T+T+ +L +M K + + +Q + K+ ++ ++ +
Sbjct: 434 LNPMVNEATKTLTESQATLREMQKTLATLNKLTSSKAMQDLPEDMQKTLLELNRSMKGFQ 493
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + ++ + L T N + R
Sbjct: 494 PGSPAYNKMVADMQRLDQVLRELQPVLRTLNEKSNALVFEAPGNQDPQPKR 544
>gi|289748647|ref|ZP_06508025.1| MCE-family protein mce1C [Mycobacterium tuberculosis T92]
gi|289689234|gb|EFD56663.1| MCE-family protein mce1C [Mycobacterium tuberculosis T92]
Length = 514
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 8 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 66 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 122 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 182 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 242 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 284
>gi|183983841|ref|YP_001852132.1| Mce family protein, Mce5C [Mycobacterium marinum M]
gi|183177167|gb|ACC42277.1| Mce family protein, Mce5C [Mycobacterium marinum M]
Length = 351
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+ L + + GIPVG + + L + H A IR D L
Sbjct: 48 GAGYRRYTAEFLQAAA-LRAGNPIAIAGIPVGTVTSMKLVGD---HVEAGLRIRDDVVLG 103
Query: 95 PSTTATIRTQGLAGITY 111
+TATIR + G Y
Sbjct: 104 KDSTATIRVTTILGSRY 120
>gi|284007559|emb|CBA73085.1| paraquat-inducible protein B [Arsenophonus nasoniae]
Length = 537
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/414 (10%), Positives = 102/414 (24%), Gaps = 39/414 (9%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
+I L+ + V F+G VG + D + N +
Sbjct: 155 VILTSDQAGRLNMGAPVLFHGYRVGSVEASSFDIKSRN---------------------M 193
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
Q Y L T IA + + + + S F +
Sbjct: 194 HYQLFINAPYDGLVTENVRFWRDSGIALDLSAQGVRLEMGSLTTLFSGGVSFDVVEGWQP 253
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+ ++ +I N +
Sbjct: 254 GKRVEDKSLFRLYEDQKSIQNSLYTVHKDFVLFFTDSVRRLQPGAPVEFRGIRLGTVMEV 313
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-- 279
+ + + + I S + + + +R ++ +
Sbjct: 314 PFDSEKLRQKLDNEFRIPVLIHIEPGRVSADIDLEKEFAVALRQGLRAALKSANLITGAL 373
Query: 280 --KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
+D K K + + + R I I+ N
Sbjct: 374 YIDLDFYPEKGQWKGPLKVADYDIIPTVSAGLSQIQQKVVEALDKINRMPIEPMISQATN 433
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ + ++ +S++N + K+ ++ D Q+ + + + P+ L
Sbjct: 434 TLAESQKTIREAQRTLSELNKLMTSKDFQNIPADLQQTLFELNRVMQGLQPGSPAYNRML 493
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N +++L + + + +++ E +K +PK
Sbjct: 494 DN------------MQRLDQVLRDIQPVIKTLNNKSNALIF--EAKPMKDPEPK 533
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/248 (9%), Positives = 65/248 (26%), Gaps = 17/248 (6%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHSLAKALIRPDTPL 93
++ SV L + V F GI +G ++ + D + I P +
Sbjct: 283 FVLFFTDSVRRLQPGAPVEFRGIRLGTVMEVPFDSEKLRQKLDNEFRIPVLIHIEPG-RV 341
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
I + P + +
Sbjct: 342 SADIDLEKEFAVALRQGLRAALKSANLITGALYIDLDFYPEKGQWKGPLKVADYDIIPTV 401
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
++ + ++ + + P+ I+ I + + S D
Sbjct: 402 SAGLSQIQQKVVEALDKINRMPIEPMISQATNTLAESQKTIREAQRTLSELNKLMTSKDF 461
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+N + + L+++++ + + N + + ++ + D++ +T
Sbjct: 462 QNIPADLQQTLFELNRVMQGLQPG---------SPAYNRMLDNMQRLDQVLRDIQPVIKT 512
Query: 274 FQEVGQKI 281
+
Sbjct: 513 LNNKSNAL 520
>gi|170769275|ref|ZP_02903728.1| paraquat-inducible protein B [Escherichia albertii TW07627]
gi|170121927|gb|EDS90858.1| paraquat-inducible protein B [Escherichia albertii TW07627]
Length = 545
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/411 (9%), Positives = 89/411 (21%), Gaps = 43/411 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D + +I Q
Sbjct: 167 AGQLTAGDPVLFRGYRVGSVETSTFDTQKR---------------------SISYQLFIN 205
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + M S + + + +
Sbjct: 206 APYDRLVTSNVRFWKDSGIAVDLTSAGMRVEMGSLTTLLSGGVSFDVPEGLEQGQPVAPK 265
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ I + + + +
Sbjct: 266 TAFVLYDDQKGIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNM 325
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ--------K 280
+ D + + + ++ D V + ++ + + G
Sbjct: 326 RQTFNDDYRIPVLVRIEPERLKMQLGENKDVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+D + + + + + + I + S
Sbjct: 386 LDFYPNTPAITGVREFDGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +N I A + L D Q + + +
Sbjct: 446 ESQRTMKNLQATLDSMNKILASQSMQQLPTDIQSTLRELNRSMQGFQP------------ 493
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ N + +++L + + L +V+ E K +PK
Sbjct: 494 GSAAYNKMVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 57.6 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/269 (9%), Positives = 69/269 (25%), Gaps = 16/269 (5%)
Query: 23 FSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL------ 73
+ + + + ++ SV GL + V F GI +G + +
Sbjct: 267 AFVLYDDQKGIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMR 326
Query: 74 -DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
I P+ L G + + A +
Sbjct: 327 QTFNDDYRIPVLVRIEPE-RLKMQLGENKDVVEHLGELLKRGLRGSLKTGNLVTGALYVD 385
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ ++ Q+++E ++K + + +T +
Sbjct: 386 LDFYPNTPAITGVREFDGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLS 445
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
K + T + + + + + I S + + + N
Sbjct: 446 ESQRTMKNLQATLDSMNKILASQSMQQLPTDIQSTLRELNRSMQGFQPGSA-----AYNK 500
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKI 281
V ++ + +++ +T E +
Sbjct: 501 MVADMQRLDQVLRELQPVLKTLNEKSNAL 529
>gi|134098927|ref|YP_001104588.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338]
gi|291009379|ref|ZP_06567352.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338]
gi|133911550|emb|CAM01663.1| putative secreted protein [Saccharopolyspora erythraea NRRL 2338]
Length = 370
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 39/114 (34%), Gaps = 5/114 (4%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
+ + V R S G+ T++ V + G+PVGR+ L L
Sbjct: 23 YVGANYAGLDKLLYDDGYVVRARF-ASAGGIFTNAEVTYRGVPVGRVGELRLTASGM--- 78
Query: 82 LAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A LI + T A + + AG Y++L R + + +
Sbjct: 79 EADLLIDSAGAGIPADTEAVVANRSAAGEQYVDLRPRRTGGSVLRDGSVIQQAD 132
>gi|323717160|gb|EGB26369.1| MCE-family protein mce1C [Mycobacterium tuberculosis CDC1551A]
Length = 519
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|308375090|ref|ZP_07442635.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu007]
gi|308347575|gb|EFP36426.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu007]
Length = 490
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|308372826|ref|ZP_07430018.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu005]
gi|308339695|gb|EFP28546.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu005]
Length = 512
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|308370335|ref|ZP_07421115.2| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu003]
gi|308373909|ref|ZP_07434062.2| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu006]
gi|308376328|ref|ZP_07438424.2| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu008]
gi|308332313|gb|EFP21164.1| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu003]
gi|308343702|gb|EFP32553.1| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu006]
gi|308351474|gb|EFP40325.1| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu008]
Length = 519
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|118463686|ref|YP_881586.1| virulence factor Mce [Mycobacterium avium 104]
gi|254775055|ref|ZP_05216571.1| hypothetical protein MaviaA2_10336 [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118164973|gb|ABK65870.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 346
Score = 59.2 bits (140), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/254 (11%), Positives = 69/254 (27%), Gaps = 7/254 (2%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ L + + GIPVG + + L + H A +R +
Sbjct: 42 LGAGYRHYTAEFAQAAS-LRAGNPIVVAGIPVGTVTSMKLVGD---HVEAGLKVRDNISF 97
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA---TPSGINYFISN 150
+ A IR + G Y+ L + + + + +
Sbjct: 98 GKDSRAQIRVTTILGSRYLALEPNGPARLPGNTFDLAHTEVPYDLQAALQDATTTFEQVD 157
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
++ ++ ++ + ++ + + + +T I+T + T
Sbjct: 158 SDRFAQSLAVLGKQLEGLPAVVPQAITNIDTLSSIIATRRDQLGQLLRSTEQVTNTLRRQ 217
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ +A+ + + + S V V + D+R+
Sbjct: 218 QAGIGALVDQGQDLLGQFVARRAVFHAMMRSLSSLVDTLSRVVVNDRSGVDALLKDIRDF 277
Query: 271 TQTFQEVGQKIDHL 284
T + L
Sbjct: 278 TGLVSAHDDLLHSL 291
>gi|308378567|ref|ZP_07483024.2| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu009]
gi|308352201|gb|EFP41052.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu009]
Length = 486
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|289445702|ref|ZP_06435446.1| MCE-family protein mce1C [Mycobacterium tuberculosis CPHL_A]
gi|289418660|gb|EFD15861.1| MCE-family protein mce1C [Mycobacterium tuberculosis CPHL_A]
Length = 505
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 8 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 66 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 122 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 182 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 242 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 284
>gi|226330657|ref|ZP_03806175.1| hypothetical protein PROPEN_04577 [Proteus penneri ATCC 35198]
gi|225201452|gb|EEG83806.1| hypothetical protein PROPEN_04577 [Proteus penneri ATCC 35198]
Length = 550
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/409 (9%), Positives = 89/409 (21%), Gaps = 41/409 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + + E + Q
Sbjct: 171 AGQLNAGDPVLFRGYQVGSVETSEFNIESR---------------------DMHYQLFIK 209
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y ++ T IA + + + S F I+
Sbjct: 210 APYDKMVTSNVRFWKDSGIAFDMSSSGVRVEMASLSTLFSGGVSFDVPAGWVPGDPIEPK 269
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
E +I N + T
Sbjct: 270 TEFKLYDNEKSIQNSLYTDYRSYIMFFSDSVRGLQAGAPVEFRGIRMGTVVQVPYYTKGM 329
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ--------K 280
+ D + I + +N+ +S D V + + G
Sbjct: 330 QQSLDKDFRIPVLIHVEPERFANDVGESFDFVKEITFASNNGLRASLKSGNLLTGALYID 389
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+D + K + S + + + S
Sbjct: 390 LDFYPDEAKWKGPQEVAGIQQIPTVSSGLAQIQQKVMTSLDKINNLPVEPMLKEMTATLS 449
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + E + +N + E +L D Q+++ + +
Sbjct: 450 ESQKAVSEAKETLKSLNAMIGSDEFRNLPSDIQQSLKEINRSMQGFQP------------ 497
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ + +++L + + L +++ ++G K
Sbjct: 498 GSPAYGKMIDNMQQLDQVLREMQPLLKTLNNKSNALIFEAKEGKDPEPK 546
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/260 (9%), Positives = 81/260 (31%), Gaps = 6/260 (2%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N I+ SV GL + V F GI +G +V + + +
Sbjct: 280 SIQNSLYTDYRSYIMFFSDSVRGLQAGAPVEFRGIRMGTVVQVPYYTKGMQQ-----SLD 334
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + + A+ ++ + A ++++
Sbjct: 335 KDFRIPVLIHVEPERFANDVGESFDFVKEITFASNNGLRASLKSGNLLTGALYIDLDFYP 394
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
A+ + + I + + + + +++ I+ + + +
Sbjct: 395 DEAKWKGPQEVAGIQQIPTVSSGLAQIQQKVMTSLDKINNLPVEPMLKEMTATLSESQKA 454
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
S + + + + + + + Q + +I ++Q + ++I+ + +
Sbjct: 455 VSEAKETLKSLNAMIGSDEFRNLPSDIQQSLKEINRSMQGFQPGSP-AYGKMIDNMQQLD 513
Query: 269 ETTQTFQEVGQKIDHLLSDF 288
+ + Q + + +++ +
Sbjct: 514 QVLREMQPLLKTLNNKSNAL 533
Score = 45.3 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 44/478 (9%), Positives = 130/478 (27%), Gaps = 50/478 (10%)
Query: 2 ESKNYYTS----VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-S 56
E+K V + + L + +Y+ + + I + DG+ +
Sbjct: 11 EAKINKLKSWSPVWIIPLVTLLIGAWILYY------HFSHQGPEVTLITYNADGIEAGKT 64
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIEL 114
++ + +G + + LD + + A + + L T + + L
Sbjct: 65 KIKSRSVDIGLVESVSLDSN-FSRVIITARLDKEMKELLRADTAFWVVRPQVGKEGVTGL 123
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
TL Q + + S +S+ + + + +
Sbjct: 124 GTLLSGAYIELQPGLKGKEEDEFNLLDSPPLASPDAKGIRINLVSEGAGQLNAGDPVLFR 183
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK-MIKA 233
+ + + ++ + D+ +S + + +
Sbjct: 184 GYQVGSVETSEFNIESRDMHYQLFIKAPYDKMVTSNVRFWKDSGIAFDMSSSGVRVEMAS 243
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT--FQEVGQKIDHLLSDFSSK 291
+ + ++ + ++D ++ Q + + I
Sbjct: 244 LSTLFSGGVSFDVPAGWVPGDPIEPKTEFKLYDNEKSIQNSLYTDYRSYIMFFSDSVRGL 303
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + + + + E +++ +S E
Sbjct: 304 QAGAPVEFRGIRMGTVVQVPYYTKGMQQSLDKDFRIPVLIHVEPERFANDVGESFDFVKE 363
Query: 352 LM-SKINNISALKENNSLFKDA----------------------QRAMHTFRDTSEKINR 388
+ + N + A ++ +L A + + T +I +
Sbjct: 364 ITFASNNGLRASLKSGNLLTGALYIDLDFYPDEAKWKGPQEVAGIQQIPTVSSGLAQIQQ 423
Query: 389 YIPSIGNNLQNF--------SQSGLNDIQNLVRKLQETVNHFDDCL--NNFERNPQDI 436
+ + + + N + L++ Q V + +ET+ + + + F P DI
Sbjct: 424 KVMTSLDKINNLPVEPMLKEMTATLSESQKAVSEAKETLKSLNAMIGSDEFRNLPSDI 481
>gi|289572751|ref|ZP_06452978.1| MCE-family protein mce1C [Mycobacterium tuberculosis K85]
gi|289537182|gb|EFD41760.1| MCE-family protein mce1C [Mycobacterium tuberculosis K85]
Length = 515
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 8 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 66 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 122 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 182 FSDTIGKRDEQITHLLAQANQVASILGDRSDQVDRLLVNAKTLIAAFNERGRAVDALLGN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 242 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 284
>gi|31791349|ref|NP_853842.1| MCE-family protein MCE1C [Mycobacterium bovis AF2122/97]
gi|121636083|ref|YP_976306.1| MCE-family protein mce1C [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988556|ref|YP_002643243.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31616934|emb|CAD93041.1| MCE-FAMILY PROTEIN MCE1C [Mycobacterium bovis AF2122/97]
gi|121491730|emb|CAL70192.1| MCE-family protein mce1C [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224771669|dbj|BAH24475.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length = 515
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 8 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 66 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 122 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 182 FSDTIGKRDEQITHLLAQANQVASILGDRSDQVDRLLVNAKTLIAAFNERGRAVDALLGN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 242 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 284
>gi|315441806|ref|YP_004074685.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260109|gb|ADT96850.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 405
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 38/116 (32%), Gaps = 7/116 (6%)
Query: 1 MESKNY--YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M +K Y G VV L + + P ++ + S L + S V
Sbjct: 5 MNTKRQPPYKIAG--VVLALVTILILVLVYLQFRGDFLPRTQLTMISARSGLSLDSGSKV 62
Query: 59 RFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
FNG+ +G++ + + + P + + A I + G Y
Sbjct: 63 TFNGVEIGKVSEVEETTVGGEPRAKILLEVNPKYLELIPRNVNADISATTVFGNKY 118
>gi|157145397|ref|YP_001452716.1| hypothetical protein CKO_01139 [Citrobacter koseri ATCC BAA-895]
gi|157082602|gb|ABV12280.1| hypothetical protein CKO_01139 [Citrobacter koseri ATCC BAA-895]
Length = 877
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W Y+ V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----GSYEDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L ++ + I+ + L T + T
Sbjct: 69 QGVEVGTVQDISLSKD-LRKIEVRVSIKSNMKDALREETQFWLVTP 113
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 12/114 (10%), Positives = 24/114 (21%), Gaps = 1/114 (0%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
L+ + V F GI VG + G+ L + R + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMTLGSLSDRVMIAMRISQRYQHLVRNNSVFWLASGYSL 816
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + K
Sbjct: 817 DFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLLESEPKEWRE 870
>gi|152992925|ref|YP_001358646.1| hypothetical protein SUN_1336 [Sulfurovum sp. NBC37-1]
gi|151424786|dbj|BAF72289.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 533
Score = 59.2 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/406 (8%), Positives = 98/406 (24%), Gaps = 37/406 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D + I++ + + S + + +P G + L + + P
Sbjct: 164 DEKGTQYILK-AQDIGSIDIGSPIYYKKLPAGSVSAYHLSHDGR---EVDIEVFIKAP-- 217
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
Y +L + I+ + + T S
Sbjct: 218 ----------------YDKLINNQTRFWNASGISASLSANGVDIRTESLTAILSGGLSFD 261
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + ++ T + + D + V
Sbjct: 262 N--FRQQGTVKKVKPNHVFTLYNTMKEAQKRHYQRELFFWVYFDSSIRGLSVGAPVEFRG 319
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ D + + + +I + +S+ V +
Sbjct: 320 VNIGEVVDFSLVGNAYDAHFRIPILIKIEPERFTIMHREKNASNGVNPA------ILKKL 373
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
E G + + + + + A +
Sbjct: 374 IENGFRAQLKSGNLITGELYVNLDMYKDLPAATLKQENGLYVIPTVPGTIETLKSDLKTV 433
Query: 335 IENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
++ I S + K EL + + + + + + + ++
Sbjct: 434 LDKIASVPFEEIGK--ELRDTLKELR-----TGTLPQLNATIKSTDNMMKGAGSSMQALQ 486
Query: 395 NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
N + + I L+ ++ +T + + ER+P+ ++ G+
Sbjct: 487 QNYLDSNAQINKKIIRLLDEMTKTSRSIKNLTDYLERHPESLIQGK 532
>gi|269138616|ref|YP_003295316.1| paraquat-inducible protein B [Edwardsiella tarda EIB202]
gi|267984276|gb|ACY84105.1| paraquat-inducible protein B [Edwardsiella tarda EIB202]
gi|304558629|gb|ADM41293.1| Paraquat-inducible protein B [Edwardsiella tarda FL6-60]
Length = 547
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/411 (9%), Positives = 100/411 (24%), Gaps = 29/411 (7%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTAT 100
I+ + L+ V F G+ VG + D + + DT + +
Sbjct: 161 IMLVSDKAGQLNPGDPVLFRGLRVGSVETSGFDTKARKITYQLFIAAPYDTLVTENVRFW 220
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + ++ + T+ + +T N
Sbjct: 221 VDSGISFDVSAQGMRVQMGSLATLLSGGVSFDVPQGLTPGKEVTNLSDYIL--------- 271
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ I +++ + L + + + +
Sbjct: 272 -YDNQNSIQDSLYTEHFDVLMFFADSIRGLQAGAPVEFRGIRLG----TVAQVPYYVKGL 326
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + ++ + ++ + ++ + +
Sbjct: 327 DQRLDANYRIPVLVHIEPERIEENMGDNFDLRQHLLGIRHSGLRAALKSSNLITGALYID 386
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+D + K + + I+
Sbjct: 387 LDFYPNAKPWKGPDVINGIPIMPTVSGGLAQLQQKVTAVLDKLNALPLEPMISAATGALK 446
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ K E + ++NNI + K SL D QR++ T + I
Sbjct: 447 TSQGTMLKTQETLRQLNNILSSKAMQSLPSDLQRSLIELNRTIKGIQP------------ 494
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + + ++ L + + L + +V+ E + K PK
Sbjct: 495 GSPAYNQMVSDMQHLDQVLRELQPVLRTLNQKSNALVF--EAPAGKDPHPK 543
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 9/67 (13%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL---------FLDQEYPN 79
S + +V++ S+ GL + V F GI +G + + LD Y
Sbjct: 277 SIQDSLYTEHFDVLMFFADSIRGLQAGAPVEFRGIRLGTVAQVPYYVKGLDQRLDANYRI 336
Query: 80 HSLAKAL 86
L
Sbjct: 337 PVLVHIE 343
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 12/101 (11%), Positives = 37/101 (36%), Gaps = 12/101 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + + +++ L ++ Y S + I + +G+ ++++
Sbjct: 16 RWSPVWI-IPILTALIGAWIIFYHFSHQG-------PEVTLITQNAEGIIAGKTAIKSRS 67
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ VG + + L + N + KA ++ L + +
Sbjct: 68 VDVGTVESVTLS-DNLNQVIVKARLQTGMEKLLRKDSVFWV 107
>gi|15607312|ref|NP_214685.1| MCE-family protein MCE1C [Mycobacterium tuberculosis H37Rv]
gi|148659935|ref|YP_001281458.1| MCE-family protein Mce1C [Mycobacterium tuberculosis H37Ra]
gi|148821363|ref|YP_001286117.1| MCE-family protein mce1C [Mycobacterium tuberculosis F11]
gi|215406164|ref|ZP_03418345.1| MCE-family protein mce1C [Mycobacterium tuberculosis 02_1987]
gi|215433091|ref|ZP_03431010.1| MCE-family protein mce1C [Mycobacterium tuberculosis EAS054]
gi|260199174|ref|ZP_05766665.1| MCE-family protein mce1C [Mycobacterium tuberculosis T46]
gi|289441546|ref|ZP_06431290.1| MCE-family protein mce1C [Mycobacterium tuberculosis T46]
gi|289552423|ref|ZP_06441633.1| MCE-family protein mce1C [Mycobacterium tuberculosis KZN 605]
gi|289568070|ref|ZP_06448297.1| MCE-family protein mce1C [Mycobacterium tuberculosis T17]
gi|289747938|ref|ZP_06507316.1| MCE-family protein mce1c [Mycobacterium tuberculosis 02_1987]
gi|289756236|ref|ZP_06515614.1| MCE-family protein mce1c [Mycobacterium tuberculosis EAS054]
gi|297729624|ref|ZP_06958742.1| MCE-family protein mce1C [Mycobacterium tuberculosis KZN R506]
gi|298527563|ref|ZP_07014972.1| mce-family protein mce1c [Mycobacterium tuberculosis 94_M4241A]
gi|308231484|ref|ZP_07412598.2| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu001]
gi|308369324|ref|ZP_07417342.2| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu002]
gi|2213508|emb|CAB09754.1| MCE-FAMILY PROTEIN MCE1C [Mycobacterium tuberculosis H37Rv]
gi|148504087|gb|ABQ71896.1| MCE-family protein Mce1C [Mycobacterium tuberculosis H37Ra]
gi|148719890|gb|ABR04515.1| MCE-family protein mce1C [Mycobacterium tuberculosis F11]
gi|289414465|gb|EFD11705.1| MCE-family protein mce1C [Mycobacterium tuberculosis T46]
gi|289437055|gb|EFD19548.1| MCE-family protein mce1C [Mycobacterium tuberculosis KZN 605]
gi|289541823|gb|EFD45472.1| MCE-family protein mce1C [Mycobacterium tuberculosis T17]
gi|289688466|gb|EFD55954.1| MCE-family protein mce1c [Mycobacterium tuberculosis 02_1987]
gi|289696823|gb|EFD64252.1| MCE-family protein mce1c [Mycobacterium tuberculosis EAS054]
gi|298497357|gb|EFI32651.1| mce-family protein mce1c [Mycobacterium tuberculosis 94_M4241A]
gi|308217095|gb|EFO76494.1| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu001]
gi|308328033|gb|EFP16884.1| MCE-family protein mce1C [Mycobacterium tuberculosis SUMu002]
gi|326905927|gb|EGE52860.1| MCE-family protein mce1C [Mycobacterium tuberculosis W-148]
gi|328456880|gb|AEB02303.1| MCE-family protein mce1C [Mycobacterium tuberculosis KZN 4207]
gi|328864224|gb|AEB53195.1| MCE family protein 1C [Mycobacterium tuberculosis]
Length = 515
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 8 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 65
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 66 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 121
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 122 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 181
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 182 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 241
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 242 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 284
>gi|156933593|ref|YP_001437509.1| hypothetical protein ESA_01415 [Cronobacter sakazakii ATCC BAA-894]
gi|156531847|gb|ABU76673.1| hypothetical protein ESA_01415 [Cronobacter sakazakii ATCC BAA-894]
Length = 877
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 14/145 (9%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + V L + + I+ Y+ V I S DG+ + VR+
Sbjct: 17 KRRISPFWI--LPVIALLIAGWLIW-----TTYEERGTTVTIDF-MSADGIVAGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ--GLAGITYIELST 116
G+ VG + + L ++ N I+ D L T + T LAG++ ++
Sbjct: 69 QGVEVGTVQDIRLSED-LNKIEVTVSIKNDMKDALRDQTQFWLVTPKASLAGVSGLDALV 127
Query: 117 LRKEKKTIFQIATERNQRAMITATP 141
+ R+ + P
Sbjct: 128 GGNYIGMMPGEGEPRDHFRALDTQP 152
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 28/115 (24%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSMSDRVMVAMRISKRYQHLVRENSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P +++ K
Sbjct: 816 LNFGLVGGVVKTGTFNQFIRGGIAFATPPETPLAPKAQPGKHFLLQDSEPKEWRQ 870
>gi|41407951|ref|NP_960787.1| hypothetical protein MAP1853 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396305|gb|AAS04170.1| hypothetical protein MAP_1853 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 359
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/254 (11%), Positives = 69/254 (27%), Gaps = 7/254 (2%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ L + + GIPVG + + L + H A +R +
Sbjct: 55 LGAGYRHYTAEFAQAAS-LRAGNPIVVAGIPVGTVTSMKLVGD---HVEAGLKVRDNISF 110
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA---TPSGINYFISN 150
+ A IR + G Y+ L + + + + +
Sbjct: 111 GKDSRAQIRVTTILGSRYLALEPNGPARLPGNTFDLAHTEVPYDLQAALQDATTTFEQVD 170
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
++ ++ ++ + ++ + + + +T I+T + T
Sbjct: 171 SDRFAQSLAVLGKQLEGLPAVVPQAITNIDTLSSIIATRRDQLGQLLRSTEQVTNTLRRQ 230
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ +A+ + + + S V V + D+R+
Sbjct: 231 QAGIGALVDQGQDLLGQFVARRAVFHAMMRSLSSLVDTLSRVVVDDRSGVDALLKDIRDF 290
Query: 271 TQTFQEVGQKIDHL 284
T + L
Sbjct: 291 TGLVSAHDDLLHSL 304
>gi|332162175|ref|YP_004298752.1| paraquat-inducible protein B [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325666405|gb|ADZ43049.1| paraquat-inducible protein B [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860154|emb|CBX70475.1| paraquat-inducible protein B [Yersinia enterocolitica W22703]
Length = 550
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 82/281 (29%), Gaps = 16/281 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + V F GI +G + + E +
Sbjct: 280 SIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRIGTVGDVPFFAEGMRQ-----RVD 334
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + E + I + A ER RA + +
Sbjct: 335 NDFRIP----VLIRIEP---GRFREDLGPDANFEKILKTAKERGLRASLKSGNLLTGALF 387
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + D+ + L T + I + + I+ + VT
Sbjct: 388 VDLDFY----PDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKVMQTLDKINSLPLDPMVTE 443
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + T+ + +L+ + + + +++Q + N +S
Sbjct: 444 VTKTLAESQKTMRETQKTLESLTALTSSPAMQDLPKDLQKTLNELNRSMKGFQPGSPAYN 503
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ Q + Q + L + + F +
Sbjct: 504 KMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQ 544
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/415 (10%), Positives = 108/415 (26%), Gaps = 44/415 (10%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 167 SEQAGQLNAGDPVLFRGYRVGSVETSAFDAKSR---------------------LMRYQL 205
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
G Y L T +A + + + M S F D + I
Sbjct: 206 FIGAPYDSLVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLDPGKQI 265
Query: 166 -----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + ++ + ++ + + +
Sbjct: 266 TEAKAEFKLFDNRSSIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRIGTVGDVPFF 325
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + I + + + + +R + ++ +
Sbjct: 326 AEGMRQRVDNDFRIPVLIRIEPGRFREDLGPDANFEKILKTAKERGLRASLKSGNLLTGA 385
Query: 281 I-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L +K + + S + I T + + + +T
Sbjct: 386 LFVDLDFYPDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKVMQTLDKINSLPLDPMVTEVT 445
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
L +S + E + +++AL + + +D + + + + + +++
Sbjct: 446 KTLAESQKTMRETQKTLESLTALTSSPA-----------MQDLPKDLQKTLNELNRSMKG 494
Query: 400 FSQSGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
F Q G +V +Q + L +V+ E + +PK
Sbjct: 495 F-QPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 546
>gi|183598391|ref|ZP_02959884.1| hypothetical protein PROSTU_01784 [Providencia stuartii ATCC 25827]
gi|188020568|gb|EDU58608.1| hypothetical protein PROSTU_01784 [Providencia stuartii ATCC 25827]
Length = 549
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/383 (9%), Positives = 98/383 (25%), Gaps = 15/383 (3%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
+I + L+ V F G VG + D + + + + P + +
Sbjct: 163 VILVSDRAGQLNPGDPVLFRGYRVGSVETSNFD---MSKRDMRYQLFINAPYDKLISTNV 219
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
R +GI + S + + A + N E
Sbjct: 220 RFWKDSGIAFDMSSQGIHVELGSIATLLTGGVSFDVPAGWAPGEGVKENTEFKLF----- 274
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTIT 221
+I+ L T + + + + + +
Sbjct: 275 -----DNQSSIQNSLYTEYQDFVLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYTKGLD 329
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++ I ++ + + ++ + +
Sbjct: 330 QKLDNDFRIPVLIHIEPERFAKDVGADFNLKNELKLAMKDGLRASLKSGNLLTGALFVDL 389
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + + K + + I +N +
Sbjct: 390 DFVPNVPEYKGPTVVAGYKVIPTTSGGLAQIQQKVISVLDKINAMPIEPMLNQTTQTLAE 449
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ ++ +++++N + KE L +D Q+ ++ + P+ + N
Sbjct: 450 GQKTIKEAQVMLAELNKVMGSKEFQKLPQDLQKTLNEMNRAMQGFQPGSPAYNKMVDNMQ 509
Query: 402 --QSGLNDIQNLVRKLQETVNHF 422
L ++Q L+R L N
Sbjct: 510 RLDQVLREVQPLLRTLNNKSNAL 532
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 76/276 (27%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + V F GI +G + + + + +
Sbjct: 279 SIQNSLYTEYQDFVLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYTKGLDQ-----KLD 333
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + L + E+ A + + A G+ +
Sbjct: 334 NDFRIP------------------VLIHIEPERFAKDVGADFNLKNELKLAMKDGLRASL 375
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + + + E + I T S LA + ++ P
Sbjct: 376 KSGNLLTGALFVDLDFVPNVPEYKGPTVVAGYKVIPTTSGGLAQIQQKVISVLDKINAMP 435
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T T+ + ++ + + + Q + K+ +++ + +
Sbjct: 436 IEPMLNQTTQTLAEGQKTIKEAQVMLAELNKVMGSKEFQKLPQDLQKTLNEMNRAMQGFQ 495
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L T N
Sbjct: 496 PGSPAYNKMVDNMQRLDQVLREVQPLLRTLNNKSNA 531
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 43/462 (9%), Positives = 128/462 (27%), Gaps = 47/462 (10%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
+V++L ++ Y S + I + +G+ + ++ + +G + +
Sbjct: 27 IVTVLIGAWILFYHFSHQG-------PEVTLITYNAEGIEAGKTKIKSRSVDIGIVESVT 79
Query: 73 LDQEYPNHSLAKALIRPDTP--LYPSTTATI-----------RTQGLAGITYIELSTLRK 119
LD + + + KA + D L + I L +IEL
Sbjct: 80 LD-DNFSRVVIKARLNSDMKDLLRADSAFWIVKPTIGREGVTGLGTLLSGVFIELQPGNS 138
Query: 120 EKKTIFQIATE------RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+K+ + + + + S ++ + + + +
Sbjct: 139 KKEHNEFTLLDSPPLASPDAKGIRVILVSDRAGQLNPGDPVLFRGYRVGSVETSNFDMSK 198
Query: 174 KPLTTTIANIETISTVLANNISHI------DKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + +++ N+ M S + ++ + +
Sbjct: 199 RDMRYQLFINAPYDKLISTNVRFWKDSGIAFDMSSQGIHVELGSIATLLTGGVSFDVPAG 258
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + ++ +N N+ + D Q V + L +
Sbjct: 259 WAPGEGVKENTEFKLFDNQSSIQNSLYTEYQDFVLFFSDSVRGLQPGAPVEFRGIRLGTV 318
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+K L+N + + + + + + S
Sbjct: 319 AQVPFYTKGLDQKLDNDFRIPVLIHIEPERFAKDVGADFNLKNELKLAMKDGLRASLKSG 378
Query: 348 KF--AELMSKINNISALKENNS--------LFKDAQRAMHTFRD-TSEKINRYIPSIGNN 396
L ++ + + E + + + +++
Sbjct: 379 NLLTGALFVDLDFVPNVPEYKGPTVVAGYKVIPTTSGGLAQIQQKVISVLDKINAMPIEP 438
Query: 397 LQNFSQSGLNDIQNLVRKLQETVNHFDDCL--NNFERNPQDI 436
+ N + L + Q +++ Q + + + F++ PQD+
Sbjct: 439 MLNQTTQTLAEGQKTIKEAQVMLAELNKVMGSKEFQKLPQDL 480
>gi|197284669|ref|YP_002150541.1| paraquat-inducible protein B [Proteus mirabilis HI4320]
gi|227356875|ref|ZP_03841254.1| paraquat-inducible protein B [Proteus mirabilis ATCC 29906]
gi|194682156|emb|CAR41781.1| paraquat-inducible protein B [Proteus mirabilis HI4320]
gi|227162945|gb|EEI47890.1| paraquat-inducible protein B [Proteus mirabilis ATCC 29906]
Length = 550
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/402 (7%), Positives = 93/402 (23%), Gaps = 27/402 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
L+ V F G VG + + + H D + + +
Sbjct: 171 AGQLNAGDPVLFRGYQVGSVETSEFNIESRDMHYQLFIKAPYDKMVTSNVRFWKDSGIAF 230
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
++ + T+F + E + K +K
Sbjct: 231 DMSSSGVRVEMASLSTLFSGGVSFDVP-----------TGWLPGEAIAPKTEFKLYDNEK 279
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
I+N + + S + ++ D +
Sbjct: 280 SIQNSLYTDYRSYIMFFSDSIRGLQAGAPVEFRGIRMGTVVQVPYYTQEMQQSLDKDFRI 339
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+I + N + E+ + + + ++ T +
Sbjct: 340 PVLIHVEPERFANDVGESFDFVKELSSAAKNGLRASLKSGNLLTGALYIDLDFYQDVEPW 399
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + + + + + + +
Sbjct: 400 KGPQTVAGLPQIPTVSSGLTQ---IQQKVMTSLDKINNLPVEPMLKEMTATLTESQKAVA 456
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ E + +N + + L D Q+++ + + +
Sbjct: 457 EAKETLKSLNAMIGSDDFQKLPNDIQQSLKEINRSMQGFQP------------GSPAYSK 504
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ + +++L + + L +++ ++G K
Sbjct: 505 MVDNMQRLDQVLREMQPLLKTLNNKSNALIFEAQQGKDPEPK 546
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/276 (11%), Positives = 76/276 (27%), Gaps = 23/276 (8%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N I+ S+ GL + V F GI +G +V + + +
Sbjct: 280 SIQNSLYTDYRSYIMFFSDSIRGLQAGAPVEFRGIRMGTVVQVPYYTQEMQQ-----SLD 334
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + + + + A + RA + +
Sbjct: 335 KDFRIP-------VLIHVEPERFANDVGESFDFVKELSSAAKNGLRASLKSGNLLTGALY 387
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + Q + + I T+S+ L + + P
Sbjct: 388 IDLD-----------FYQDVEPWKGPQTVAGLPQIPTVSSGLTQIQQKVMTSLDKINNLP 436
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
K T+T+ ++ + + + ++ Q N+ +S ++ ++ +
Sbjct: 437 VEPMLKEMTATLTESQKAVAEAKETLKSLNAMIGSDDFQKLPNDIQQSLKEINRSMQGFQ 496
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + ++ + L +T N
Sbjct: 497 PGSPAYSKMVDNMQRLDQVLREMQPLLKTLNNKSNA 532
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 42/461 (9%), Positives = 125/461 (27%), Gaps = 46/461 (9%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + +Y+ + + I + DG+ + ++ + +G + + L
Sbjct: 28 LVTLLIGAWILYY------HFSHQGPEVTLITYNADGIEAGKTKIKSRSVDIGLVESVTL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
D + + KA + + L T + + L TL Q
Sbjct: 82 DSN-FSRVIIKARLDNEMKELLRADTAFWVVKPQVGKEGVTGLGTLLSGAYIELQPGLTG 140
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
++ S +S+ + + + + +
Sbjct: 141 KEQDEFNLLDSPPLASPDAKGIRINLVSERAGQLNAGDPVLFRGYQVGSVETSEFNIESR 200
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK-MIKAIDLQKVNQILENIQVSS 250
+ + ++ + D+ +S + + ++ + ++
Sbjct: 201 DMHYQLFIKAPYDKMVTSNVRFWKDSGIAFDMSSSGVRVEMASLSTLFSGGVSFDVPTGW 260
Query: 251 NNFVKSSDQVINTVHDVRETTQT--FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + ++D ++ Q + + I +
Sbjct: 261 LPGEAIAPKTEFKLYDNEKSIQNSLYTDYRSYIMFFSDSIRGLQAGAPVEFRGIRMGTVV 320
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-NNISALKENNS 367
+ + + + + E +++ +S EL S N + A ++ +
Sbjct: 321 QVPYYTQEMQQSLDKDFRIPVLIHVEPERFANDVGESFDFVKELSSAAKNGLRASLKSGN 380
Query: 368 LFK-------------------DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ------ 402
L + S + + + +L +
Sbjct: 381 LLTGALYIDLDFYQDVEPWKGPQTVAGLPQIPTVSSGLTQIQQKVMTSLDKINNLPVEPM 440
Query: 403 -----SGLNDIQNLVRKLQETVNHFDDCL--NNFERNPQDI 436
+ L + Q V + +ET+ + + ++F++ P DI
Sbjct: 441 LKEMTATLTESQKAVAEAKETLKSLNAMIGSDDFQKLPNDI 481
>gi|24375439|ref|NP_719482.1| mce-related protein [Shewanella oneidensis MR-1]
gi|24350283|gb|AAN56926.1|AE015826_11 mce-related protein [Shewanella oneidensis MR-1]
Length = 157
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 52/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+F+++ L ++ ++ + + ++ GL S V+
Sbjct: 1 MLTRKIELLVGVFLLTGLAAFLVLVFKVANIEVQTSDSSYTLSANFTNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-- 118
G+ VGR+ + LD + + + +++ I T GL G ++ L+
Sbjct: 61 GGVVVGRVSKIDLDPVKLVAVVTIVMDKRYDKFPETSSLAILTSGLLGEQFLGLTPGFVD 120
Query: 119 KEKKTIFQIATERNQR 134
+ + + R
Sbjct: 121 DDVSMLKDGDKIDDTR 136
>gi|332089958|gb|EGI95058.1| hypothetical protein SB521682_2069 [Shigella boydii 5216-82]
Length = 877
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L+ T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALHEETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|300716115|ref|YP_003740918.1| Paraquat-inducible protein B [Erwinia billingiae Eb661]
gi|299061951|emb|CAX59067.1| Paraquat-inducible protein B [Erwinia billingiae Eb661]
Length = 539
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 43/409 (10%), Positives = 106/409 (25%), Gaps = 41/409 (10%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D + + Q
Sbjct: 161 AGQLNPGDPVLFRGYRVGSVETSHFDADKR---------------------MMTYQLFIA 199
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + + M S F + + Q
Sbjct: 200 APYDRLITTNVRFWKDSGIAVDMSASGMRVEMGSLTTLFSGGVSFDVPDGWELGQVAQNQ 259
Query: 169 IEN----IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
E ++ + ++ + + + + + + ++
Sbjct: 260 SEYKLFDDQRSIQDSLYTAHKDFLMFFTDSIRGLQPGAPIEFRGIRLGTVAEVPFKSTVL 319
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DH 283
I + + + +F + +R + ++ + +
Sbjct: 320 AQQLDTDYRIPVLIRIEPDRFQSMLGKDFNIEQHLKDGINNGLRASLKSANLLTGSLYID 379
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
L ++K + + + + S + I + + + TS L
Sbjct: 380 LDFYKNAKPFTGPRTLSGYELIPTVSGGLAQIQQKLMDALDKVNNLPLNPLLNQATSTLK 439
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
S + EL ++NI+ + + + +D + + + + +++ F Q
Sbjct: 440 QSQKTIQELQKTLDNINQITSSQ-----------SMKDLPADMQKTLRELNTSMKGF-QP 487
Query: 404 GLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
G +V +Q + L +V+ + G K
Sbjct: 488 GSPAYTRMVGDMQRLDQVMRELQPVLKTLNSKSNALVFEAKPGQDPQPK 536
Score = 50.7 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 19/57 (33%), Gaps = 7/57 (12%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHSLAKALIRPD 90
++ S+ GL + + F GI +G + + + I PD
Sbjct: 282 FLMFFTDSIRGLQPGAPIEFRGIRLGTVAEVPFKSTVLAQQLDTDYRIPVLIRIEPD 338
>gi|183984678|ref|YP_001852969.1| MCE-family protein [Mycobacterium marinum M]
gi|183178004|gb|ACC43114.1| MCE-family protein [Mycobacterium marinum M]
Length = 425
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/105 (13%), Positives = 30/105 (28%), Gaps = 6/105 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVG 66
GL V ++ V + P GL + D+ V+ G+ VG
Sbjct: 39 LAGLATVLVIALIVAVAV--GLFRGDFTQSVPVTVVSPR--AGLVMNPDAKVKMRGVEVG 94
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
++ + + + + I + + G +
Sbjct: 95 KVAAIDVRSNGDAVLHLAMDPSQIRLIPSNVLVDIASTSVFGAKF 139
>gi|183983842|ref|YP_001852133.1| MCE-family protein Mce5D [Mycobacterium marinum M]
gi|183177168|gb|ACC42278.1| MCE-family protein Mce5D [Mycobacterium marinum M]
Length = 371
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 31/103 (30%), Gaps = 4/103 (3%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
V + S GL + V G+PVG++ + + + I + A
Sbjct: 37 TVTAQF-DSASGLYEGNVVAVLGMPVGQVTKIRP---KGGYVEVEFTIDRKVKIPADAQA 92
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ + IEL+ + + T R S
Sbjct: 93 VTVSTSILTDRQIELTPPYRGGPVLQSHDTIGLTRTKTPVEFS 135
>gi|254366623|ref|ZP_04982667.1| MCE-family protein mce1C [Mycobacterium tuberculosis str. Haarlem]
gi|134152135|gb|EBA44180.1| MCE-family protein mce1C [Mycobacterium tuberculosis str. Haarlem]
Length = 509
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|289764287|ref|ZP_06523665.1| MCE-family protein mce1C [Mycobacterium tuberculosis GM 1503]
gi|289711793|gb|EFD75809.1| MCE-family protein mce1C [Mycobacterium tuberculosis GM 1503]
Length = 512
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 6/283 (2%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+GL + + + + + S GL VR G+ V
Sbjct: 12 NRMRIGLMGIVVALLVVAVGQSFTSVPMLFAKPSYYG-QFTDS-GGLHKGDRVRIAGLGV 69
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + GL +D + H + K I +T + + IRT + G +E+ +
Sbjct: 70 GTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLAIRTDTILGRKVLEIEPRGAQALPPG 125
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + + + + + + S + + ++ L+ + +
Sbjct: 126 GVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKRSLNVLSETVDQTYPHLSAALDGVAK 185
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
S + I ++ ++ + + V+ +L N
Sbjct: 186 FSDTIGKRDEQITHLLAQANQVASILGDRSEQVDRLLVNAKTLIAAFNERGRAVDALLGN 245
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I S + N H + + + + + L
Sbjct: 246 ISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDRKEDLAETL 288
>gi|183980445|ref|YP_001848736.1| MCE-family protein Mce1C [Mycobacterium marinum M]
gi|183173771|gb|ACC38881.1| MCE-family protein Mce1C [Mycobacterium marinum M]
Length = 521
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/249 (12%), Positives = 77/249 (30%), Gaps = 5/249 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S G++ VR G+ VG++ GL +D + H + K I +T + + +
Sbjct: 42 YYGQFTDS-GGINNGDKVRIAGLDVGKVEGLRIDGD---HIVMKFSIGTNT-IGTDSRLS 96
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + +
Sbjct: 97 IRTDTILGKKVVEIEARGNQPLRPGGTLPLGQSTTPYQIYDAFFDVTRAATGWDIDTVKK 156
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + I+ L++ + + S L + ++ ++
Sbjct: 157 SLHVLSETIDQTYPHLSSALDGVAKFSDTLGKRDDELKHLLAQANQVASVLGDRSAQVDR 216
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + + ++ +L NI S + N H + + + ++
Sbjct: 217 LLVNAKTLLVAFNERGRAIDALLGNIASFSAQVQGLINDNPNLNHVLEQLRTVSDVLIER 276
Query: 281 IDHLLSDFS 289
+ L
Sbjct: 277 KEDLAKGLE 285
>gi|123441884|ref|YP_001005867.1| paraquat-inducible protein B [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088845|emb|CAL11651.1| putative paraquat-inducible protein B [Yersinia enterocolitica
subsp. enterocolitica 8081]
Length = 541
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 75/291 (25%), Gaps = 23/291 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + V F GI +G + + E +
Sbjct: 271 SIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRIGTVGDVPFFAEGIRQ-----RVD 325
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + E + I + A ER RA + +
Sbjct: 326 NDFRIP----VLIRIEP---GRFREDLGPDANFEKILKTAKERGLRASLKSGNLLTGALF 378
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + A + + + P
Sbjct: 379 VDLDFYPDAKPWKGPLEVAGYPLLPTVSGGL-----------AQIQQKVMQTLDKINSLP 427
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T+ + ++ + K ++ +Q + K+ +++ ++ +
Sbjct: 428 LDPMVTEVTKTLAESQKTMRETQKTLESLTALTASPAMQDLPKDLQKTLNELNRSMKGFQ 487
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + ++ + L T N + +
Sbjct: 488 PGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKK 538
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 45/415 (10%), Positives = 107/415 (25%), Gaps = 44/415 (10%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 158 SEQAGQLNAGDPVLFRGYRVGSVETSAFDAKSR---------------------LMRYQL 196
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
G Y L T +A + + + M S F D + I
Sbjct: 197 FIGAPYDSLVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLDPGKQI 256
Query: 166 -----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + ++ + ++ + + +
Sbjct: 257 TEAKAEFKLFDNRSSIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRIGTVGDVPFF 316
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ I I + + + + +R + ++ +
Sbjct: 317 AEGIRQRVDNDFRIPVLIRIEPGRFREDLGPDANFEKILKTAKERGLRASLKSGNLLTGA 376
Query: 281 I-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L +K + + S + I T + + + +T
Sbjct: 377 LFVDLDFYPDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKVMQTLDKINSLPLDPMVTEVT 436
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
L +S + E + +++AL A +D + + + + + +++
Sbjct: 437 KTLAESQKTMRETQKTLESLTALT-----------ASPAMQDLPKDLQKTLNELNRSMKG 485
Query: 400 FSQSGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
F Q G +V +Q + L +V+ E + +PK
Sbjct: 486 F-QPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 537
>gi|331677712|ref|ZP_08378387.1| putative inner membrane protein [Escherichia coli H591]
gi|331074172|gb|EGI45492.1| putative inner membrane protein [Escherichia coli H591]
Length = 224
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
>gi|322833556|ref|YP_004213583.1| Mammalian cell entry related domain protein [Rahnella sp. Y9602]
gi|321168757|gb|ADW74456.1| Mammalian cell entry related domain protein [Rahnella sp. Y9602]
Length = 876
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 42/131 (32%), Gaps = 10/131 (7%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + IY + Y V I S G+ + VR+ G+ VG + + L
Sbjct: 28 FIALLIAGWLIY-----SNYQERGNTVTIDF-QSAAGIVAGRTPVRYQGVEVGTVESISL 81
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIATE 130
++ L T + T LAG++ ++ + E
Sbjct: 82 TKDLRTIQVKVSIKSDLSDALREGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGPGKE 141
Query: 131 RNQRAMITATP 141
++ + P
Sbjct: 142 KDHFVALDTQP 152
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
V L + V F GI VG + G +L I + ++ + +
Sbjct: 755 VGSLQIGTPVLFRGIEVGTVSGFYLGAMADR-VNVTLRISKKYQYLVRENSVFWLASGYD 813
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P N + K
Sbjct: 814 LQFGLTGGVFKSGTFQQFIRGGIAFATPPTTPLAPKASNGNHFLLNPEAPKDWQK 868
Score = 40.7 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
LS +R+ GI +G++ L LD +
Sbjct: 641 DASKLSAGMPIRYLGITIGQVESLKLDPQ 669
>gi|320198013|gb|EFW72621.1| Paraquat-inducible protein B [Escherichia coli EC4100B]
Length = 734
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
>gi|306814918|ref|ZP_07449074.1| mce-related protein [Escherichia coli NC101]
gi|305851566|gb|EFM52019.1| mce-related protein [Escherichia coli NC101]
Length = 830
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 39.9 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLAS 812
>gi|119468692|ref|ZP_01611744.1| putative paraquat-inducible protein B [Alteromonadales bacterium
TW-7]
gi|119447748|gb|EAW29014.1| putative paraquat-inducible protein B [Alteromonadales bacterium
TW-7]
Length = 551
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/274 (12%), Positives = 76/274 (27%), Gaps = 13/274 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
II S+ GL + V + GI +G +V E P + + +P
Sbjct: 279 FYDFDYYIIDFEQSIRGLRPGAPVEYRGIRIGTVV------EAPANIIV--NGKPAHFKS 330
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
+T+ + + G Y +T + K + E RA + + +
Sbjct: 331 ANTSVPVLIKIEYGRIYHHSATAKDFWKESLKGWIEIGMRASLKPGNLLTGAVYVDFDMY 390
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + T+ + + N +++ + QV S
Sbjct: 391 PDAPEAEFEKLGQYTVFPSISSGITVLADQVSDVLNKVNNLKVEESLAQIQVAFADYQSL 450
Query: 215 NTFNTITDLITSLDK-----MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ K + E + + S H +++
Sbjct: 451 ANEMRTLLNEKDTQNLPGDINRNFAKMTKSMEQFEVTMRQFDKTMASYQAGSEFHHQLQQ 510
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
T + F+ + ++I L + + L
Sbjct: 511 TLREFKRLSEEIQPLTRGLNEQPNMLIFDKSLPA 544
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 34/103 (33%), Gaps = 12/103 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
E + + F ++ L + GP + + +G+ + ++
Sbjct: 10 EPRISAIWI-----IPAIALFVGVWMLYQYQANKGPTIYIEM---PQAEGIIAGKTEIKV 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ +G+I + L + + +A+A I L +
Sbjct: 62 RSVKIGQIDSVRLS-DSQDSVIARAQIDKSYEDLLTDDAKIWV 103
>gi|260201059|ref|ZP_05768550.1| MCE-family protein mce3A [Mycobacterium tuberculosis T46]
gi|289443450|ref|ZP_06433194.1| MCE-family protein mce3A [Mycobacterium tuberculosis T46]
gi|289570056|ref|ZP_06450283.1| MCE-family protein mce3A [Mycobacterium tuberculosis T17]
gi|289746095|ref|ZP_06505473.1| virulence factor [Mycobacterium tuberculosis 02_1987]
gi|289754063|ref|ZP_06513441.1| virulence factor [Mycobacterium tuberculosis EAS054]
gi|294996888|ref|ZP_06802579.1| MCE-family protein mce3A [Mycobacterium tuberculosis 210]
gi|298525460|ref|ZP_07012869.1| MCE-family protein mce3A [Mycobacterium tuberculosis 94_M4241A]
gi|289416369|gb|EFD13609.1| MCE-family protein mce3A [Mycobacterium tuberculosis T46]
gi|289543810|gb|EFD47458.1| MCE-family protein mce3A [Mycobacterium tuberculosis T17]
gi|289686623|gb|EFD54111.1| virulence factor [Mycobacterium tuberculosis 02_1987]
gi|289694650|gb|EFD62079.1| virulence factor [Mycobacterium tuberculosis EAS054]
gi|298495254|gb|EFI30548.1| MCE-family protein mce3A [Mycobacterium tuberculosis 94_M4241A]
gi|326903573|gb|EGE50506.1| MCE-family protein mce3A [Mycobacterium tuberculosis W-148]
Length = 425
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 13 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLTADRSGLVMDSGAKVMMRG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE-LSTLRK 119
+ VGR+ + + N + + I PD + + A I G +++ +
Sbjct: 66 VQVGRVAQIGRIEWAQNGASLRLEIDPDQIRYIPANVEAQISATTAFGAKFVDLVMPQNP 125
Query: 120 EKKTIFQIAT 129
+ + A
Sbjct: 126 SRARLSAGAV 135
>gi|294632694|ref|ZP_06711253.1| virulence factor Mce family protein [Streptomyces sp. e14]
gi|292830475|gb|EFF88825.1| virulence factor Mce family protein [Streptomyces sp. e14]
Length = 348
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/269 (6%), Positives = 68/269 (25%), Gaps = 9/269 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+D + +V G+ S +R G+ G + + + + +
Sbjct: 36 FDSTGTRLTAYFDRAV-GIYAGSDLRILGVRAGEVTSVHPQG---TQVRVELALDEGVKV 91
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER-----NQRAMITATPSGINYFI 148
A I + +++L+ ++ + A + S +
Sbjct: 92 PEGARAVIVAPSIVADRFVQLTPAYRDGPALADGAVLPASGNRTPVEIDQLYASVTDLSK 151
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + S ++ N++ ++ D + T
Sbjct: 152 ALGPDGANSTGALSDLLRTGAANLDGNGAAIGDSVRQFGKAAKTLNGSSDNLFTTLSRLQ 211
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ +T + + + ++ + + + +++
Sbjct: 212 TFTTMLKDKDTDVRTAQERLDTVVGFFADNKDDLTGALKELGTALAQVKQFIADNRGELK 271
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + Q + + + +
Sbjct: 272 KNVDKLVPITQTLVRQRASLAEALDVAPL 300
>gi|126432721|ref|YP_001068412.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126232521|gb|ABN95921.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 406
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/122 (10%), Positives = 40/122 (32%), Gaps = 4/122 (3%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + + V+ ++F ++ + ++ ++ L + V +N
Sbjct: 10 KPRTPPYKIAGLVLLVIFAVVATLVAFQFRGDFASREKLTMMAARAGLN-LDPGTKVTYN 68
Query: 62 GIPVGRIVGLF-LDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLR 118
G+ +GR+ + + + + + + A I + G Y+ +T
Sbjct: 69 GVEIGRVAEVNAVSVGNDPRARITLEVDTKYMQLIPANVLADISATTVFGNKYVSFTTPP 128
Query: 119 KE 120
Sbjct: 129 DP 130
>gi|330859782|emb|CBX70115.1| hypothetical protein YEW_GF26560 [Yersinia enterocolitica W22703]
Length = 273
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y N + EV I S G+ + VR+ G+ VG + + L
Sbjct: 28 FIALLIAGWLVY-----NNWQERGTEVTIDF-QSAAGIVAGRTPVRYQGVEVGMVQSISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
D + + A I+ D L T + T
Sbjct: 82 D-DDLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
+ L+ S V + IPVG++ + + + R + +T +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYNIAPDNNGVVIDVLIDRRFAKLVKNNTRFWNVSGFK 228
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRA 135
+ S + + A R
Sbjct: 229 GDFSLNGASVQMESLAALVNGAIALTPRP 257
>gi|260203316|ref|ZP_05770807.1| MCE-family protein [Mycobacterium tuberculosis K85]
Length = 501
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S GL VR G+ VG + GL +D + H + K I +T + +
Sbjct: 28 YYGQFTDS-GGLHKGDRVRIAGLGVGTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLA 82
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + + + + +
Sbjct: 83 IRTDTILGRKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKR 142
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + ++ L+ + + S + I ++ ++
Sbjct: 143 SLNVLSETVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSDQVDR 202
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V+ +L NI S + N H + + + +
Sbjct: 203 LLVNAKTLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDR 262
Query: 281 IDHLLSDF 288
+ L
Sbjct: 263 KEDLAETL 270
>gi|289760273|ref|ZP_06519651.1| MCE-family protein mce1c [Mycobacterium tuberculosis T85]
gi|289715837|gb|EFD79849.1| MCE-family protein mce1c [Mycobacterium tuberculosis T85]
Length = 495
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S GL VR G+ VG + GL +D + H + K I +T + +
Sbjct: 46 YYGQFTDS-GGLHKGDRVRIAGLGVGTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLA 100
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + + + + +
Sbjct: 101 IRTDTILGRKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKR 160
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + ++ L+ + + S + I ++ ++
Sbjct: 161 SLNVLSETVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSEQVDR 220
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V+ +L NI S + N H + + + +
Sbjct: 221 LLVNAKTLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDR 280
Query: 281 IDHLLSDF 288
+ L
Sbjct: 281 KEDLAETL 288
>gi|260185034|ref|ZP_05762508.1| MCE-family protein mce1C [Mycobacterium tuberculosis CPHL_A]
Length = 496
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S GL VR G+ VG + GL +D + H + K I +T + +
Sbjct: 33 YYGQFTDS-GGLHKGDRVRIAGLGVGTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLA 87
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + + + + +
Sbjct: 88 IRTDTILGRKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKR 147
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + ++ L+ + + S + I ++ ++
Sbjct: 148 SLNVLSETVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSEQVDR 207
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V+ +L NI S + N H + + + +
Sbjct: 208 LLVNAKTLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDR 267
Query: 281 IDHLLSDF 288
+ L
Sbjct: 268 KEDLAETL 275
>gi|218755905|ref|ZP_03534701.1| virulence factor mce family protein [Mycobacterium tuberculosis GM
1503]
Length = 494
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S GL VR G+ VG + GL +D + H + K I +T + +
Sbjct: 28 YYGQFTDS-GGLHKGDRVRIAGLGVGTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLA 82
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + + + + +
Sbjct: 83 IRTDTILGRKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKR 142
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + ++ L+ + + S + I ++ ++
Sbjct: 143 SLNVLSETVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSEQVDR 202
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V+ +L NI S + N H + + + +
Sbjct: 203 LLVNAKTLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDR 262
Query: 281 IDHLLSDF 288
+ L
Sbjct: 263 KEDLAETL 270
>gi|215448450|ref|ZP_03435202.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
Length = 477
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S GL VR G+ VG + GL +D + H + K I +T + +
Sbjct: 28 YYGQFTDS-GGLHKGDRVRIAGLGVGTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLA 82
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + + + + +
Sbjct: 83 IRTDTILGRKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKR 142
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + ++ L+ + + S + I ++ ++
Sbjct: 143 SLNVLSETVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSEQVDR 202
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V+ +L NI S + N H + + + +
Sbjct: 203 LLVNAKTLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDR 262
Query: 281 IDHLLSDF 288
+ L
Sbjct: 263 KEDLAETL 270
>gi|215425378|ref|ZP_03423297.1| virulence factor mce family protein [Mycobacterium tuberculosis
T92]
Length = 500
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S GL VR G+ VG + GL +D + H + K I +T + +
Sbjct: 28 YYGQFTDS-GGLHKGDRVRIAGLGVGTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLA 82
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + + + + +
Sbjct: 83 IRTDTILGRKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKR 142
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + ++ L+ + + S + I ++ ++
Sbjct: 143 SLNVLSETVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSEQVDR 202
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V+ +L NI S + N H + + + +
Sbjct: 203 LLVNAKTLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDR 262
Query: 281 IDHLLSDF 288
+ L
Sbjct: 263 KEDLAETL 270
>gi|167970292|ref|ZP_02552569.1| virulence factor mce family protein [Mycobacterium tuberculosis
H37Ra]
gi|215414036|ref|ZP_03422695.1| MCE-family protein mce1C [Mycobacterium tuberculosis 94_M4241A]
gi|219555969|ref|ZP_03535045.1| MCE-family protein mce1C [Mycobacterium tuberculosis T17]
gi|253797093|ref|YP_003030094.1| MCE-family protein mce1C [Mycobacterium tuberculosis KZN 1435]
gi|254549110|ref|ZP_05139557.1| MCE-family protein mce1C [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|294994646|ref|ZP_06800337.1| MCE-family protein mce1C [Mycobacterium tuberculosis 210]
gi|297632649|ref|ZP_06950429.1| MCE-family protein mce1C [Mycobacterium tuberculosis KZN 4207]
gi|313656950|ref|ZP_07813830.1| MCE-family protein mce1C [Mycobacterium tuberculosis KZN V2475]
gi|253318596|gb|ACT23199.1| MCE-family protein mce1C [Mycobacterium tuberculosis KZN 1435]
Length = 501
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S GL VR G+ VG + GL +D + H + K I +T + +
Sbjct: 28 YYGQFTDS-GGLHKGDRVRIAGLGVGTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLA 82
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + + + + +
Sbjct: 83 IRTDTILGRKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKR 142
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + ++ L+ + + S + I ++ ++
Sbjct: 143 SLNVLSETVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSEQVDR 202
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V+ +L NI S + N H + + + +
Sbjct: 203 LLVNAKTLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDR 262
Query: 281 IDHLLSDF 288
+ L
Sbjct: 263 KEDLAETL 270
>gi|15839549|ref|NP_334586.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|13879661|gb|AAK44400.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
Length = 506
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 5/248 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ S GL VR G+ VG + GL +D + H + K I +T + +
Sbjct: 33 YYGQFTDS-GGLHKGDRVRIAGLGVGTVEGLKIDGD---HIVVKFSIGTNT-IGTESRLA 87
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
IRT + G +E+ + + + + + + + +
Sbjct: 88 IRTDTILGRKVLEIEPRGAQALPPGGVLPVGQSTTPYQIYDAFFDVTKAASGWDIETVKR 147
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
S + + ++ L+ + + S + I ++ ++
Sbjct: 148 SLNVLSETVDQTYPHLSAALDGVAKFSDTIGKRDEQITHLLAQANQVASILGDRSEQVDR 207
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V+ +L NI S + N H + + + +
Sbjct: 208 LLVNAKTLIAAFNERGRAVDALLGNISAFSAQVQNLINDNPNLNHVLEQLRILTDLLVDR 267
Query: 281 IDHLLSDF 288
+ L
Sbjct: 268 KEDLAETL 275
>gi|311279267|ref|YP_003941498.1| Mammalian cell entry related domain-containing protein
[Enterobacter cloacae SCF1]
gi|308748462|gb|ADO48214.1| Mammalian cell entry related domain protein [Enterobacter cloacae
SCF1]
Length = 878
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/89 (26%), Positives = 36/89 (40%), Gaps = 6/89 (6%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+F WL N YD + I S DG+ + VR+ G+ VG + + L ++
Sbjct: 28 VIAFMIAGWL-IWNTYDDRGTTITIDF-MSADGIVPGRTPVRYQGVEVGTVEDITLSKD- 84
Query: 78 PNHSLAKALIRPDTP--LYPSTTATIRTQ 104
N KA I+ D L T + T
Sbjct: 85 LNKIEVKASIKGDLKDALRADTQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 28/115 (24%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
LS + V F GI VG + G+ L + + I + ++ + +
Sbjct: 758 AGSLSIGTPVLFRGIEVGTVTGMQL-GSLSDRVMVALRISKRYQHLVRNNSVFWLASGYS 816
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + I P + T K
Sbjct: 817 LNFGLVGGVVKTGTFNQFIRGGIAFATPPGIPLAPKAQEGKHFLLQETEPKEWRD 871
>gi|295096312|emb|CBK85402.1| Paraquat-inducible protein B [Enterobacter cloacae subsp. cloacae
NCTC 9394]
Length = 546
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/403 (10%), Positives = 96/403 (23%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDPQKR-----TISYQLFINAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T + P GI+ AE T+ ++ D + IQ
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG-GVSFDVPEGIDLGQPVAEKTAFRLFDDQKSIQDA 280
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + A ++ + ++
Sbjct: 281 LYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRL-------GTVGQVPYFVPGLKQMLDDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ I ++ I + + S ++ + +D
Sbjct: 334 RIPVLIRIEPERLINQIGEDQDIGEHISDLMNRGLRGSLKTGNLVTGALYVDMDFYPKAP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + + + Q+
Sbjct: 394 PMTGIREFGGYKIIPTVSSGLAQIQQRLMETLDKINNLPLNPMLEAATGSLHQSQATMQR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ IN I+A + L +D Q+ + + + + N +
Sbjct: 454 LQTTLDNINKITANQSMQQLPQDMQKTLRELNRSMQGFQP------------GSAAYNKM 501
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 502 VADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 542
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/257 (10%), Positives = 73/257 (28%), Gaps = 21/257 (8%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL-FLDQ------EYPNHSLAKALIR 88
+ ++ SV GL + V F GI +G + + + + I
Sbjct: 283 TDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVGQVPYFVPGLKQMLDDDYRIPVLIRIE 342
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELST----LRKEKKTIFQIATERNQRAMITATPSGI 144
P+ + I G +L + + A + A P
Sbjct: 343 PERLIN-----QIGEDQDIGEHISDLMNRGLRGSLKTGNLVTGALYVDMDFYPKAPPMTG 397
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ S ++ Q+++E ++K + + +T + + + TT
Sbjct: 398 IREFGGYKIIPTVSSGLAQIQQRLMETLDKINNLPLNPMLEAATGSLHQSQATMQRLQTT 457
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ + + + + + + + N V ++ +
Sbjct: 458 LDNINKITANQSMQQLPQDMQKTLRELNRSMQGFQPGSA-----AYNKMVADMQRLDQVL 512
Query: 265 HDVRETTQTFQEVGQKI 281
+++ +T E +
Sbjct: 513 RELQPVLKTLNEKSNAL 529
>gi|170728556|ref|YP_001762582.1| hypothetical protein Swoo_4231 [Shewanella woodyi ATCC 51908]
gi|169813903|gb|ACA88487.1| Mammalian cell entry related domain protein [Shewanella woodyi ATCC
51908]
Length = 155
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 4/138 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSN-QYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ VGLF++S L ++ ++ + +G + + ++ GL S V+
Sbjct: 1 MLTRKIEILVGLFILSGLAAFLVLVFNVANVEVKANGSNYTLYAKFS-NIGGLKVRSPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + LD K + +++ +I T GL G ++ L+
Sbjct: 60 VGGVVVGRVSEINLDPTELVPV-VKLSMDKRFNQFPETSSLSILTSGLLGEQFLGLTPGF 118
Query: 119 KEKKTIFQIATERNQRAM 136
+ + +R
Sbjct: 119 IDDDIAMLVDGDRIDDTH 136
>gi|89900017|ref|YP_522488.1| ABC-type transport system periplasmic component [Rhodoferax
ferrireducens T118]
gi|89344754|gb|ABD68957.1| ABC-type transport system periplasmic component [Rhodoferax
ferrireducens T118]
Length = 299
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 45/118 (38%), Gaps = 2/118 (1%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ +V + + ++ + ++++ S +G+ + F+G P+GR+ +
Sbjct: 1 MLLVLVTALICGFLLYVMYARGVFEKTQQLVLVADDS-EGVLVGMDLTFSGFPIGRVRRI 59
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
L + + ++ L S+ T+ + + G T++ + + A
Sbjct: 60 ELALDGKARMVIDVPLKDAPWLRTSSIFTME-RSMVGETHLRAFSGILSDPPLPANAE 116
>gi|302551007|ref|ZP_07303349.1| virulence factor Mce family protein [Streptomyces viridochromogenes
DSM 40736]
gi|302468625|gb|EFL31718.1| virulence factor Mce family protein [Streptomyces viridochromogenes
DSM 40736]
Length = 440
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/304 (12%), Positives = 97/304 (31%), Gaps = 5/304 (1%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ +VG ++S F+ + L G V + V L S+V+ N + VG
Sbjct: 12 WAAVGTLLLSGCEFNGWYDVPLPGGAAPGGHAYHVTVEF-RDVLDLVPQSAVKVNNVTVG 70
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L+ H+ A+ + L + A +R + G Y+ LS +
Sbjct: 71 AVEKVELEG---WHARARLRVADSVKLPANAIAELRQTSMLGEKYVALSRPLETAPAGRL 127
Query: 127 IATERNQRAMITATPSGINY-FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ + P +A ++ ++ + ++ + ++
Sbjct: 128 RDGDVIPLSRSGRNPEVEEVLSALSALLNGGGVAQLKTITTELNKALDGRENRVRSLLKE 187
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ T + ++ + + T + + + +
Sbjct: 188 LDTFIGGLDDQRQDIVRALKAVDRLAARLGKERTTIAEAVDAMPPALKVLADQRRDLTKM 247
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ S + V + D E + + + Q+++ SD + ++ T F N+
Sbjct: 248 LTALSELGKTGTKVVDASHDDTVENLRQLRPILQQLNKAGSDLPNSLELLTTYPFPRNVV 307
Query: 306 DSTS 309
D+
Sbjct: 308 DAIK 311
>gi|237730907|ref|ZP_04561388.1| paraquat-inducible protein B [Citrobacter sp. 30_2]
gi|226906446|gb|EEH92364.1| paraquat-inducible protein B [Citrobacter sp. 30_2]
Length = 552
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 34/403 (8%), Positives = 90/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSTFDAQKR-----TISYQLFINAPNDRLVTSNVRFWKD 227
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + ++T E +S ++
Sbjct: 228 SGIAVDLTSAGMRVEMGSLSTLFGG--------GVSFDVPEGLEQGQPVEQQASFNLYDD 279
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 280 QKSIQDSLYTDHIDYLMFFKDSIRGLQPGAPLEFRGIRLGTVSKVPFFSPNMRQVFNNDY 339
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + ++ + +D +
Sbjct: 340 RIPVLVRIEPERLKAQLGEDTDVGAHLEQLLKRGLRGSLKTGNLVTGALYVDLDFYPKEP 399
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + I N S + +
Sbjct: 400 PITGVREFNGYQIIPTVSGGLAQIQQRLMEALDKINNLPLNPMIEQATNTLSESQRTMKH 459
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ + L D Q + + + + N +
Sbjct: 460 LQTTLDNMNKITSSQSMQDLPADMQNTLRELNRSMQGFQP------------GSAAYNKM 507
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 508 VADMQRLDQVLRELQPVLKTLNDKSNALVF--EAKDKKDPEPK 548
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/263 (9%), Positives = 72/263 (27%), Gaps = 19/263 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ S+ GL + + F GI +G + +
Sbjct: 282 SIQDSLYTDHIDYLMFFKDSIRGLQPGAPLEFRGIRLGTVSKVPFFSPNMRQVFNNDYRI 341
Query: 82 LAKALIRPD---TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
I P+ L T + L + + A +
Sbjct: 342 PVLVRIEPERLKAQLGEDTDVGAHLEQLL----KRGLRGSLKTGNLVTGALYVDLDFYPK 397
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
P + + ++ Q+++E ++K + + +T +
Sbjct: 398 EPPITGVREFNGYQIIPTVSGGLAQIQQRLMEALDKINNLPLNPMIEQATNTLSESQRTM 457
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
K + TT + S + + + + + + + N V
Sbjct: 458 KHLQTTLDNMNKITSSQSMQDLPADMQNTLRELNRSMQGFQPGSA-----AYNKMVADMQ 512
Query: 259 QVINTVHDVRETTQTFQEVGQKI 281
++ + +++ +T + +
Sbjct: 513 RLDQVLRELQPVLKTLNDKSNAL 535
>gi|118470152|ref|YP_884759.1| virulence factor [Mycobacterium smegmatis str. MC2 155]
gi|118171439|gb|ABK72335.1| virulence factor [Mycobacterium smegmatis str. MC2 155]
Length = 474
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 44/123 (35%), Gaps = 8/123 (6%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLD 74
IL + ++ + S + V + + GL T + V+ NG+ VGR+ +
Sbjct: 18 ILIAALGVFFFTTGSLFAGTFRSFVPVTLVSDRSGLVMETGAKVKLNGVEVGRVSEIR-- 75
Query: 75 QEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATER 131
+ + I PD + + A I G Y++ + + A R
Sbjct: 76 -GGASGVSLQLEIEPDQIRFIPANVEARITATTAFGAKYVDLSYPDNPTGQHLAAGAVLR 134
Query: 132 NQR 134
++
Sbjct: 135 SRN 137
>gi|89054062|ref|YP_509513.1| virulence factor MCE-like protein-related protein [Jannaschia sp.
CCS1]
gi|88863611|gb|ABD54488.1| Mammalian cell entry-related protein [Jannaschia sp. CCS1]
Length = 808
Score = 58.8 bits (139), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 59/185 (31%), Gaps = 11/185 (5%)
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
E T + D ++++ + + ++ +A
Sbjct: 624 DSEGLSTTLTALEGTDTIIANLQGFTEGLPDVLTSVEEVIAGVDVSPVTAAANSADRVLL 683
Query: 327 KIISTINTIEN--ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+I +++ + LN + + +++ + A + A A + +E
Sbjct: 684 RIEDILSSESADGLPDTLNTALTELGAILATLREGGAAENLTGTLSSADSAFSALQSAAE 743
Query: 385 KINRYIPSIGNNLQ---------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
++ + + + + + S D++ + + + + F ERNP
Sbjct: 744 QVPAIVTRLNSLVTSLQGLAADYDDSSPVNRDLRAAIADISQAADAFRSLARAIERNPNS 803
Query: 436 IVWGR 440
++ GR
Sbjct: 804 LITGR 808
Score = 58.4 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/402 (10%), Positives = 114/402 (28%), Gaps = 16/402 (3%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-----DQEYPNHSLAKALIRP----- 89
+ + +P L + VR+ GI VG + + E L I P
Sbjct: 293 PLSVVMPTDDLRLGLGALVRYRGIRVGEVTNIIGFTDPRAPEDGVQILVTFSIAPARIGL 352
Query: 90 --DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
D A + + G+ S I ++ + + AT
Sbjct: 353 TGDGATTEDLIADLAVRVGDGLRVRVASEGLLGTSLILELHEDEDPDGQQLATDLIETPL 412
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ ++ + S I + + A + I+ +
Sbjct: 413 MPSSPPNVTEASADLDAIVARVAALPIEDLMNSAIDALDGITRLSTGEEINALPANLNEL 472
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ S I ++T L +++ + ++ ++ SD ++ +
Sbjct: 473 VSEARSIVAAEEIATILTDLSDAAQSVQELFTGIADSDGLTTALAALEGSDTIMANLEGF 532
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN-MRSSISAIREITDQRQ 326
+++ + + L+ I S ++
Sbjct: 533 SGRLPGVLTSVEELIAQIDTAPLTAAATSADEVLQRIDTILSAPSAETLPDDLAALIAEA 592
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI 386
+ + + + I ++L ++ L++ I + L + + + + +E +
Sbjct: 593 RAVVAGDDVATILTDLAGAADTLQTLVTGIADSEGLSTTLTALEGTDTIIANLQGFTEGL 652
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ S+ + + ++ + + +D L++
Sbjct: 653 PDVLTSVEEVI---AGVDVSPVTAAANSADRVLLRIEDILSS 691
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 45/402 (11%), Positives = 105/402 (26%), Gaps = 9/402 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP--DTPL 93
G I+ L+ + V +NGI VGR +G+ + E A I D L
Sbjct: 158 GERGTRIVLRSRDGGQLAAGAPVLYNGIEVGR-LGVPILSENGTIVTMDAFIEAPHDARL 216
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+T ++GI+ ++ E T +
Sbjct: 217 STNTRFW----DISGISVDLNASGLSVNFDSLASLLEGGVTFQSLVTGGEPVEEGQLFDV 272
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + +E + + + I T + +
Sbjct: 273 FTSREEAQRSVFVAAVEQVLPLSVVMPTDDLRLGLGALVRYRGIRVGEVTNIIGFTDPRA 332
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
I + I + L + +
Sbjct: 333 PEDGVQILVTFSIAPARIGLTGDGATTEDLIADLAVRVGDGLRVRVASEGLLGTSLILEL 392
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS-TI 332
++ L +D + + + + + ++A+ I +
Sbjct: 393 HEDEDPDGQQLATDLIETPLMPSSPPNVTEASADLDAIVARVAALPIEDLMNSAIDALDG 452
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
T + +N EL+S+ +I A +E ++ D A + ++ I
Sbjct: 453 ITRLSTGEEINALPANLNELVSEARSIVAAEEIATILTDLSDAAQSVQELFTGIADSDGL 512
Query: 393 IGNNLQ-NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNP 433
S + + +++ +L + ++ + + P
Sbjct: 513 TTALAALEGSDTIMANLEGFSGRLPGVLTSVEELIAQIDTAP 554
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 28/93 (30%), Gaps = 8/93 (8%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
V L V L S F + +I+ S G+ + +RF + VG
Sbjct: 21 WVWLMPVFALAISAFVVLQA------WRGQGPIIVVTLPSASGVEAGETPLRFRDVQVGE 74
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ L + A I D Y A
Sbjct: 75 VEELEFS-DGFGAVEAHIRIDSDVAPYVDADAE 106
>gi|226361224|ref|YP_002779002.1| Mce family protein [Rhodococcus opacus B4]
gi|226239709|dbj|BAH50057.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 337
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 38/113 (33%), Gaps = 2/113 (1%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH- 80
F I + + V GL +R G+ +G++ + L ++
Sbjct: 24 LFIIVISAMKSPVTNETNSYTAEFTD-VSGLGAHGDIRTKGVRIGKVESVELIRDGGRSL 82
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + L T ++ Q L G+ Y++ + ++ ++ +
Sbjct: 83 AEVHFTMEKPYQLTSDTILAVKYQNLTGVRYLDAEFPADPGDAVDRLPADKTR 135
>gi|134098926|ref|YP_001104587.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|291009380|ref|ZP_06567353.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|133911549|emb|CAM01662.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 354
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/282 (11%), Positives = 84/282 (29%), Gaps = 5/282 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + V L S V+ + I VG++ + L + + ++
Sbjct: 49 LPGGADVGERPYRLTVGF-ADVLDLVPQSGVKVDDIAVGKVESVELAPDG-RTAQVTVVV 106
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
D L + A +R L G ++E S + + + A R +
Sbjct: 107 NGDVDLPANAVARLRQSSLLGEKFVELAPSDVESPRGRLADGARIPAARN-DRSPEVEEV 165
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + I Q++ + + + + + T + H ++
Sbjct: 166 FGALSLLLNGGGIGQIQNINQELNDALGGNESAARQLLGNLDTFIGGLDEHRGEITRALD 225
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + + D + Q+ ++ ++ S D V +
Sbjct: 226 GVNRLAATLERDKPLIDTTLTDLSPGIDALSQQREALVAMLKSLGELSDVSVDTVNRSKD 285
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
D+ + + +++ M++ T F + ++
Sbjct: 286 DLVADLRALEPTLRRLAESGDRLPRAMQTLLTFPFPDEALNA 327
>gi|289755629|ref|ZP_06515007.1| MCE-family protein mce4a [Mycobacterium tuberculosis EAS054]
gi|289696216|gb|EFD63645.1| MCE-family protein mce4a [Mycobacterium tuberculosis EAS054]
Length = 400
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 37/112 (33%), Gaps = 10/112 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRF 60
S+ V +++ L + +LS V + P GL + V++
Sbjct: 6 SRRTSVRVAAALLAGLMVGSAVLTYLS-YTAAFTSTDTVTVSSPR--AGLVMEKGAKVKY 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
GI VG++ + H+ K I + + T I + G
Sbjct: 63 RGIQVGKVTDISYSGN---HARLKLAIDSGEMGFIPSNATVRIAGNTIFGAK 111
>gi|329903554|ref|ZP_08273549.1| hypothetical protein IMCC9480_1505 [Oxalobacteraceae bacterium
IMCC9480]
gi|327548292|gb|EGF32985.1| hypothetical protein IMCC9480_1505 [Oxalobacteraceae bacterium
IMCC9480]
Length = 310
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 48/136 (35%), Gaps = 9/136 (6%)
Query: 1 MESKN-------YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS 53
ME+++ + +V + + ++ + +++ S +G+
Sbjct: 1 MENQSDTNSVAHVEFKAVVLLVVMTALIISFLVYVMYARGVFESTQRLVLVSDDS-EGVI 59
Query: 54 TDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
+ F+G P+GR+ + L + L + L S+ T+ +G+ G T I
Sbjct: 60 VGMDLTFSGFPIGRVQRIELSPDGKARILLDIPHQDAHWLRTSSIFTME-RGMVGDTRIR 118
Query: 114 LSTLRKEKKTIFQIAT 129
T + A
Sbjct: 119 AFTGIITDPPLPPDAV 134
>gi|262203363|ref|YP_003274571.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262086710|gb|ACY22678.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 415
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/127 (17%), Positives = 47/127 (37%), Gaps = 3/127 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + VV +L + I ++ V + + S G+ T++ V + G+P
Sbjct: 8 ARWQIAVVIVVGLLAVVYAGIRYVRLDEMVGVGAYSVTVAMADS-GGIFTNAEVTYLGVP 66
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
GR+ L L + + L + P + S TA + + G +++L +
Sbjct: 67 AGRVGALRLTKSGVSVELVLDSVGP--QIPDSATAVVANRSAIGEQFVDLQPSTTSGPYL 124
Query: 125 FQIATER 131
+
Sbjct: 125 HDGSVIE 131
>gi|170726427|ref|YP_001760453.1| hypothetical protein Swoo_2074 [Shewanella woodyi ATCC 51908]
gi|169811774|gb|ACA86358.1| Mammalian cell entry related domain protein [Shewanella woodyi ATCC
51908]
Length = 550
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/402 (10%), Positives = 108/402 (26%), Gaps = 33/402 (8%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
S + + G+ VG+I ++ + + + Y
Sbjct: 172 SKGDPIIYKGLTVGQIEDVYFNIDER---------------------VVYYNAFIKSPYH 210
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH--IQKIIE 170
EL T + + + N + T + + + +
Sbjct: 211 ELVTSNTRFWDVSGLTVDLNAEGISVKTGNVETMLTNGVTFDVPDGMPLGDKITERDYFD 270
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + A + + I + V +
Sbjct: 271 IFNDYQSASNARYKHSLQYVVFVSDSIRGLNVGAPVEYRGVLIGQVASVNLATADPNVMY 330
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH-LLSDFS 289
+AI + + + +N + +H V+ + + G + L +
Sbjct: 331 NEAIRIPVLISLHPGRVGLPDNEQGINLMNEQNMHWVKSGLRASLKTGNLLTGSLFVELQ 390
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
++ S I Q ++ + ++ I N N +
Sbjct: 391 HYDMPAIDHIETYEGYAVIPTVKDEFSQIAGKLGQFVDKLNQLP-LDEIAGNANGTLVNA 449
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ L+ + + + + D Q + R T E ++ G +++
Sbjct: 450 SVLLKDLQGTNQSLDKLLISADQQELIRELRLTLENVSLLTQDFSE-----GSEGYEELE 504
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
++ + + + L + P +++ + G+ K Y+PK
Sbjct: 505 EAMKSISDVMYELKPLLEQLKHQPNGLIF--DSGT-KNYEPK 543
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/275 (9%), Positives = 81/275 (29%), Gaps = 12/275 (4%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ ++ + S+ GL+ + V + G+ +G++ + L PN + +
Sbjct: 288 QYVVFVSDSIRGLNVGAPVEYRGVLIGQVASVNLATADPN-----VMYNEAIRIP----- 337
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + + + + RA + ++
Sbjct: 338 VLISLHPGRVGLPDNEQGINLMNEQNMHWVKSGLRASLKTGNLLTGSLFVELQHYDMPAI 397
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
D + + + + I + ++ + ++
Sbjct: 398 DHIETYEGY--AVIPTVKDEFSQIAGKLGQFVDKLNQLPLDEIAGNANGTLVNASVLLKD 455
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ SLDK++ + D Q++ + L + + + + ++ E ++ +V
Sbjct: 456 LQGTNQSLDKLLISADQQELIRELRLTLENVSLLTQDFSEGSEGYEELEEAMKSISDVMY 515
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
++ LL + + +N + +
Sbjct: 516 ELKPLLEQLKHQPNGLIFDSGTKNYEPKKHSGANQ 550
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 52/464 (11%), Positives = 129/464 (27%), Gaps = 46/464 (9%)
Query: 13 FV-VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
FV + L + +Y+ + V+ S +G+ + ++ + +G +
Sbjct: 22 FVPIVALLIGGWMVYY------HWSNQGPVVTLFFESAEGMEAGKTKIKSRHVNIGEVES 75
Query: 71 LFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ-----------GLAGITYIELSTLR 118
+ L+ A+ + L + I T L YIE++ +
Sbjct: 76 ITLNDAGDGVTVTARLAKNSEKMLVEDSNFWIVTPKISLSGVSGLDTLISGVYIEIAPGK 135
Query: 119 KEKKTIFQIATER------NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
++ A + + S + S + K +
Sbjct: 136 SDEPMDEFTALDSAPITPIGTPGLHITLNSDEEFAYSKGDPIIYKGLTVGQIEDVYFNID 195
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
E+ + ++ +N D T + K +
Sbjct: 196 ERVVYYNAFIKSPYHELVTSNTRFWDVSGLTVDLNAEGISVKTGNVETMLTNGVTFDVPD 255
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-----DHLLSD 287
+ L + + ++ S+ + +++ V + + + + L+
Sbjct: 256 GMPLGDKITERDYFDIFNDYQSASNARYKHSLQYVVFVSDSIRGLNVGAPVEYRGVLIGQ 315
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+S + + N A + S + D Q I + + +S
Sbjct: 316 VASVNLATADPNVMYNEAIRIPVLISLHPGRVGLPDNEQGINLMNEQNMHWVKSGLRASL 375
Query: 348 KFAELMSKINNISALKENNSLFKDAQ-----RAMHTFRDTSEKINRYIPSIGNNLQNF-- 400
K L++ + + + + T +D +I + + L
Sbjct: 376 KTGNLLTGSLFVELQHYDMPAIDHIETYEGYAVIPTVKDEFSQIAGKLGQFVDKLNQLPL 435
Query: 401 ------SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ L + L++ LQ T D L + Q+++
Sbjct: 436 DEIAGNANGTLVNASVLLKDLQGTNQSLDKLL--ISADQQELIR 477
>gi|215404240|ref|ZP_03416421.1| MCE-family protein mce3A [Mycobacterium tuberculosis 02_1987]
gi|215411648|ref|ZP_03420444.1| MCE-family protein mce3A [Mycobacterium tuberculosis 94_M4241A]
gi|215430876|ref|ZP_03428795.1| MCE-family protein mce3A [Mycobacterium tuberculosis EAS054]
gi|219557920|ref|ZP_03536996.1| MCE-family protein mce3A [Mycobacterium tuberculosis T17]
Length = 416
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 4 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLTADRSGLVMDSGAKVMMRG 56
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ VGR+ + + N + + I PD + + A I G +
Sbjct: 57 VQVGRVAQIGRIEWAQNGASLRLEIDPDQIRYIPANVEAQISATTAFGAKF 107
>gi|15843111|ref|NP_338148.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31794675|ref|NP_857168.1| MCE-family protein MCE4A [Mycobacterium bovis AF2122/97]
gi|57117113|ref|YP_177977.1| MCE-family protein MCE4A [Mycobacterium tuberculosis H37Rv]
gi|121639418|ref|YP_979642.1| Mce-family protein mce4A [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663363|ref|YP_001284886.1| MCE-family protein Mce4A [Mycobacterium tuberculosis H37Ra]
gi|148824706|ref|YP_001289460.1| MCE-family protein mce4A [Mycobacterium tuberculosis F11]
gi|224991914|ref|YP_002646603.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800541|ref|YP_003033542.1| MCE-family protein mce4A [Mycobacterium tuberculosis KZN 1435]
gi|254234085|ref|ZP_04927410.1| MCE-family protein mce4A [Mycobacterium tuberculosis C]
gi|254366845|ref|ZP_04982886.1| MCE-family protein mce4A [Mycobacterium tuberculosis str. Haarlem]
gi|254552601|ref|ZP_05143048.1| MCE-family protein mce4A [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260206866|ref|ZP_05774357.1| MCE-family protein mce4A [Mycobacterium tuberculosis K85]
gi|289445096|ref|ZP_06434840.1| MCE-family protein mce4A [Mycobacterium tuberculosis T46]
gi|289449201|ref|ZP_06438945.1| MCE-family protein mce4A [Mycobacterium tuberculosis CPHL_A]
gi|289555765|ref|ZP_06444975.1| MCE-family protein mce4A [Mycobacterium tuberculosis KZN 605]
gi|289571732|ref|ZP_06451959.1| MCE-family protein mce4A [Mycobacterium tuberculosis T17]
gi|289576233|ref|ZP_06456460.1| MCE-family protein mce4A [Mycobacterium tuberculosis K85]
gi|289747335|ref|ZP_06506713.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289752220|ref|ZP_06511598.1| MCE-family protein mce4A [Mycobacterium tuberculosis T92]
gi|289759658|ref|ZP_06519036.1| MCE-family protein mce4a [Mycobacterium tuberculosis T85]
gi|289763679|ref|ZP_06523057.1| MCE-family protein mce4A [Mycobacterium tuberculosis GM 1503]
gi|297636155|ref|ZP_06953935.1| MCE-family protein mce4A [Mycobacterium tuberculosis KZN 4207]
gi|298526979|ref|ZP_07014388.1| MCE-family protein mce4A [Mycobacterium tuberculosis 94_M4241A]
gi|306790767|ref|ZP_07429089.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu004]
gi|306809517|ref|ZP_07446185.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu007]
gi|306973967|ref|ZP_07486628.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu010]
gi|308232483|ref|ZP_07416186.2| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu001]
gi|308370287|ref|ZP_07420917.2| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu002]
gi|308371369|ref|ZP_07667150.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu003]
gi|308373765|ref|ZP_07433599.2| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu005]
gi|308374899|ref|ZP_07437787.2| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu006]
gi|308377377|ref|ZP_07441999.2| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu008]
gi|308378351|ref|ZP_07482285.2| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu009]
gi|308380718|ref|ZP_07490845.2| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu011]
gi|7478319|pir||E70805 probable mce4 protein - Mycobacterium tuberculosis (strain H37RV)
gi|13883457|gb|AAK47962.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31620272|emb|CAD95715.1| MCE-FAMILY PROTEIN MCE4A [Mycobacterium bovis AF2122/97]
gi|41352794|emb|CAE55602.1| MCE-FAMILY PROTEIN MCE4A [Mycobacterium tuberculosis H37Rv]
gi|121495066|emb|CAL73552.1| Mce-family protein mce4A [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|124599614|gb|EAY58718.1| MCE-family protein mce4A [Mycobacterium tuberculosis C]
gi|134152354|gb|EBA44399.1| MCE-family protein mce4A [Mycobacterium tuberculosis str. Haarlem]
gi|148507515|gb|ABQ75324.1| MCE-family protein Mce4A [Mycobacterium tuberculosis H37Ra]
gi|148723233|gb|ABR07858.1| MCE-family protein mce4A [Mycobacterium tuberculosis F11]
gi|224775029|dbj|BAH27835.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322044|gb|ACT26647.1| MCE-family protein mce4A [Mycobacterium tuberculosis KZN 1435]
gi|289418015|gb|EFD15255.1| MCE-family protein mce4A [Mycobacterium tuberculosis T46]
gi|289422159|gb|EFD19360.1| MCE-family protein mce4A [Mycobacterium tuberculosis CPHL_A]
gi|289440397|gb|EFD22890.1| MCE-family protein mce4A [Mycobacterium tuberculosis KZN 605]
gi|289540664|gb|EFD45242.1| MCE-family protein mce4A [Mycobacterium tuberculosis K85]
gi|289545486|gb|EFD49134.1| MCE-family protein mce4A [Mycobacterium tuberculosis T17]
gi|289687863|gb|EFD55351.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289692807|gb|EFD60236.1| MCE-family protein mce4A [Mycobacterium tuberculosis T92]
gi|289711185|gb|EFD75201.1| MCE-family protein mce4A [Mycobacterium tuberculosis GM 1503]
gi|289715222|gb|EFD79234.1| MCE-family protein mce4a [Mycobacterium tuberculosis T85]
gi|298496773|gb|EFI32067.1| MCE-family protein mce4A [Mycobacterium tuberculosis 94_M4241A]
gi|308213829|gb|EFO73228.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu001]
gi|308324770|gb|EFP13621.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu002]
gi|308329034|gb|EFP17885.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu003]
gi|308332873|gb|EFP21724.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu004]
gi|308336456|gb|EFP25307.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu005]
gi|308340334|gb|EFP29185.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu006]
gi|308344189|gb|EFP33040.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu007]
gi|308348119|gb|EFP36970.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu008]
gi|308352883|gb|EFP41734.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu009]
gi|308356696|gb|EFP45547.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu010]
gi|308360650|gb|EFP49501.1| MCE-family protein mce4A [Mycobacterium tuberculosis SUMu011]
gi|326457815|gb|ADZ75385.1| cell entry protein Mce4a [Mycobacterium bovis]
gi|326905341|gb|EGE52274.1| MCE-family protein mce4A [Mycobacterium tuberculosis W-148]
gi|328460272|gb|AEB05695.1| MCE-family protein mce4A [Mycobacterium tuberculosis KZN 4207]
gi|328864234|gb|AEB53200.1| MCE family protein 4A [Mycobacterium tuberculosis]
Length = 400
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 38/112 (33%), Gaps = 10/112 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRF 60
S+ V +++ L + +LS + + V + P GL + V++
Sbjct: 6 SRRTSVRVAAALLAGLMVGSAVLTYLSYTAAF-TSTDTVTVSSPR--AGLVMEKGAKVKY 62
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
GI VG++ + + K I + + T I + G
Sbjct: 63 RGIQVGKVTDISYSGN---QARLKLAIDSGEMGFIPSNATVRIAGNTIFGAK 111
>gi|108797098|ref|YP_637295.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866183|ref|YP_936135.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108767517|gb|ABG06239.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692272|gb|ABL89345.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 406
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 39/117 (33%), Gaps = 5/117 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
Y GL ++ + + + + P ++ + + L + V FNG+ +G
Sbjct: 16 YKLAGLILLVVFAVIATLVAF--QFRGDFTPREKLTMMAARAGLNLDPGTKVTFNGVEIG 73
Query: 67 RIVGLF-LDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKE 120
R+ + + + + + + A I + G Y+ +T
Sbjct: 74 RVAEVNAVSVGNDPRARITLEVDTKYMQLIPANVLADISATTVFGNKYVSFTTPPDP 130
>gi|318606228|emb|CBY27726.1| paraquat-inducible protein B [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 550
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/281 (13%), Positives = 83/281 (29%), Gaps = 16/281 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + + V F GI +G + + E +
Sbjct: 280 SIQNSLYTEHEDFLLFFSDSVRGLQSGAPVEFRGIRIGTVGDVPFFAEGMRQ-----RVD 334
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + E + I + A ER RA + +
Sbjct: 335 NDFRIP----VLIRIEP---GRFREDLGPDANFEKILKTAKERGLRASLKSGNLLTGALF 387
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + D+ + L T + I + + I+ + VT
Sbjct: 388 VDLDFY----PDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKVMQTLDKINSLPLDPMVTE 443
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + T+ + +L+ + + + +++Q + N +S
Sbjct: 444 VTKTLAESQKTMRETQKTLESLTALTSSPAMQDLPKDLQKTLNELNRSMKGFQPGSPAYN 503
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ Q + Q + L + + F +
Sbjct: 504 KMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQ 544
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 43/415 (10%), Positives = 108/415 (26%), Gaps = 44/415 (10%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 167 SEQAGQLNAGDPVLFRGYRVGSVETSAFDAKSR---------------------LMRYQL 205
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
G Y L T +A + + + M S F D + I
Sbjct: 206 FIGAPYDSLVTSNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGLDPGKQI 265
Query: 166 -----QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + ++ + ++ + + +
Sbjct: 266 TEAKAEFKLFDNRSSIQNSLYTEHEDFLLFFSDSVRGLQSGAPVEFRGIRIGTVGDVPFF 325
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + I + + + + +R + ++ +
Sbjct: 326 AEGMRQRVDNDFRIPVLIRIEPGRFREDLGPDANFEKILKTAKERGLRASLKSGNLLTGA 385
Query: 281 I-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L +K + + S + I T + + + +T
Sbjct: 386 LFVDLDFYPDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKVMQTLDKINSLPLDPMVTEVT 445
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
L +S + E + +++AL + + +D + + + + + +++
Sbjct: 446 KTLAESQKTMRETQKTLESLTALTSSPA-----------MQDLPKDLQKTLNELNRSMKG 494
Query: 400 FSQSGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
F Q G +V +Q + L +V+ E + +PK
Sbjct: 495 F-QPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 546
>gi|15609107|ref|NP_216486.1| MCE-family lipoprotein LprM [Mycobacterium tuberculosis H37Rv]
gi|15841445|ref|NP_336482.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|148661779|ref|YP_001283302.1| MCE family lipoprotein LprM [Mycobacterium tuberculosis H37Ra]
gi|148823184|ref|YP_001287938.1| MCE family lipoprotein LprM [Mycobacterium tuberculosis F11]
gi|167970508|ref|ZP_02552785.1| MCE-family lipoprotein lprM (MCE-family lipoprotein mce3e)
[Mycobacterium tuberculosis H37Ra]
gi|215404236|ref|ZP_03416417.1| MCE family lipoprotein LprM [Mycobacterium tuberculosis 02_1987]
gi|215411652|ref|ZP_03420448.1| MCE family lipoprotein LprM [Mycobacterium tuberculosis 94_M4241A]
gi|215430880|ref|ZP_03428799.1| MCE family lipoprotein LprM [Mycobacterium tuberculosis EAS054]
gi|215446170|ref|ZP_03432922.1| MCE family lipoprotein LprM [Mycobacterium tuberculosis T85]
gi|218753682|ref|ZP_03532478.1| MCE family lipoprotein LprM [Mycobacterium tuberculosis GM 1503]
gi|219557924|ref|ZP_03537000.1| MCE family lipoprotein LprM [Mycobacterium tuberculosis T17]
gi|253798982|ref|YP_003031983.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis KZN 1435]
gi|254232140|ref|ZP_04925467.1| MCE-family lipoprotein lprM (MCE-family lipoprotein mce3e)
[Mycobacterium tuberculosis C]
gi|254364787|ref|ZP_04980833.1| MCE-family lipoprotein lprM (MCE-family lipoprotein mce3e)
[Mycobacterium tuberculosis str. Haarlem]
gi|254550991|ref|ZP_05141438.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260186941|ref|ZP_05764415.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis CPHL_A]
gi|260201063|ref|ZP_05768554.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis T46]
gi|289443454|ref|ZP_06433198.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis T46]
gi|289447587|ref|ZP_06437331.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis CPHL_A]
gi|289554253|ref|ZP_06443463.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis KZN 605]
gi|289570060|ref|ZP_06450287.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis T17]
gi|289746091|ref|ZP_06505469.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289754067|ref|ZP_06513445.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289758080|ref|ZP_06517458.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289762125|ref|ZP_06521503.1| MCE-family lipoprotein lprM (MCE-family lipoprotein mce3e)
[Mycobacterium tuberculosis GM 1503]
gi|294996892|ref|ZP_06802583.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis 210]
gi|297634539|ref|ZP_06952319.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis KZN 4207]
gi|297731527|ref|ZP_06960645.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis KZN R506]
gi|298525464|ref|ZP_07012873.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|306776202|ref|ZP_07414539.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu001]
gi|306784733|ref|ZP_07423055.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu003]
gi|306789090|ref|ZP_07427412.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu004]
gi|306793425|ref|ZP_07431727.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu005]
gi|306797808|ref|ZP_07436110.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu006]
gi|306803689|ref|ZP_07440357.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu008]
gi|306808263|ref|ZP_07444931.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu007]
gi|306968086|ref|ZP_07480747.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu009]
gi|306972311|ref|ZP_07484972.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu010]
gi|307080022|ref|ZP_07489192.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu011]
gi|307084596|ref|ZP_07493709.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu012]
gi|313658860|ref|ZP_07815740.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis KZN V2475]
gi|2950440|emb|CAA17843.1| POSSIBLE MCE-FAMILY LIPOPROTEIN LPRM (MCE-FAMILY LIPOPROTEIN MCE3E)
[Mycobacterium tuberculosis H37Rv]
gi|13881684|gb|AAK46296.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|124601199|gb|EAY60209.1| MCE-family lipoprotein lprM (MCE-family lipoprotein mce3e)
[Mycobacterium tuberculosis C]
gi|134150301|gb|EBA42346.1| MCE-family lipoprotein lprM (MCE-family lipoprotein mce3e)
[Mycobacterium tuberculosis str. Haarlem]
gi|148505931|gb|ABQ73740.1| MCE-family lipoprotein LprM [Mycobacterium tuberculosis H37Ra]
gi|148721711|gb|ABR06336.1| MCE-family lipoprotein lprM (MCE-family lipoprotein mce3e)
[Mycobacterium tuberculosis F11]
gi|253320485|gb|ACT25088.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis KZN 1435]
gi|289416373|gb|EFD13613.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis T46]
gi|289420545|gb|EFD17746.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis CPHL_A]
gi|289438885|gb|EFD21378.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis KZN 605]
gi|289543814|gb|EFD47462.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis T17]
gi|289686619|gb|EFD54107.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289694654|gb|EFD62083.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289709631|gb|EFD73647.1| MCE-family lipoprotein lprM (MCE-family lipoprotein mce3e)
[Mycobacterium tuberculosis GM 1503]
gi|289713644|gb|EFD77656.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|298495258|gb|EFI30552.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|308215314|gb|EFO74713.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu001]
gi|308330466|gb|EFP19317.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu003]
gi|308334300|gb|EFP23151.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu004]
gi|308338102|gb|EFP26953.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu005]
gi|308341794|gb|EFP30645.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu006]
gi|308345280|gb|EFP34131.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu007]
gi|308349584|gb|EFP38435.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu008]
gi|308354211|gb|EFP43062.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu009]
gi|308358189|gb|EFP47040.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu010]
gi|308362121|gb|EFP50972.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu011]
gi|308365775|gb|EFP54626.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis SUMu012]
gi|323719457|gb|EGB28584.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis CDC1551A]
gi|326903577|gb|EGE50510.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis W-148]
gi|328458737|gb|AEB04160.1| MCE-family lipoprotein mce3E [Mycobacterium tuberculosis KZN 4207]
Length = 377
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 39/108 (36%), Gaps = 12/108 (11%)
Query: 9 SVGLFVVSILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+GL + ++ S W L + V ++P V+ + +S VR
Sbjct: 2 RIGL-TLVMIAAVVASCGWRGLNSLPLPGTQGNGPGSFAVQAQLPD-VNNIQPNSRVRVA 59
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+ VG + + H+L + D L + TA I T L G
Sbjct: 60 DVTVGHVTKIE---RQGWHALVTMRLDGDVDLPANATAKIGTTSLLGS 104
>gi|271964518|ref|YP_003338714.1| resistance to organic solvents ABC transporter periplasmic
component-like protein [Streptosporangium roseum DSM
43021]
gi|270507693|gb|ACZ85971.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component-like protein
[Streptosporangium roseum DSM 43021]
Length = 339
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/96 (12%), Positives = 28/96 (29%), Gaps = 4/96 (4%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
+ L + ++ + V L SV+ + + VG + + L+
Sbjct: 9 AGLAGLCLAAACTLQTAGAPTGGLTLTATF-DDVQSLVAGHSVQISDVRVGSVTDIRLEG 67
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + + T A + + G Y
Sbjct: 68 ---YRAKVTMSVEDGIRVPEGTGAVVAKTSILGENY 100
>gi|111018964|ref|YP_701936.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110818494|gb|ABG93778.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 433
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/307 (11%), Positives = 92/307 (29%), Gaps = 9/307 (2%)
Query: 8 TSVGLFVVSILFFS------FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+G ++ L + I+ V L S+V+ +
Sbjct: 5 VILGAGACAVAIAVTSCSSEGIYGVPLPGGPDIGDHPMHLTIQF-DDVLDLVPQSAVKVD 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+PVGR+ + + + + + ++ L + A I L G +++LS ++K
Sbjct: 64 GVPVGRVETIKVAPDG-WTADVEVVLDSSVDLAANAVAAIEQTNLLGEKFVQLSEPPEDK 122
Query: 122 KTIFQIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + AT + + + ++ ++
Sbjct: 123 DPARLEDGDTISLDRTRHATEIEQVLGALSLLLNGGGVGQLQPIVHELTTALDGREDRVR 182
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+E +T++ D + + N N LI + + ++
Sbjct: 183 GLLEQANTLIDGLNQQRDDITRALDGLDALTTRVNEQNEKIGLILDQLPIAAEVLNEQRP 242
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q+ + + +D + + +D+ + + + D + + T F
Sbjct: 243 QLTQMLTQLDRLGTVGTDVINRSKNDLIADLLALRPTLKALAESGDDLPNSLAFIPTVPF 302
Query: 301 LENIADS 307
+ +
Sbjct: 303 PDGVEKI 309
>gi|117919132|ref|YP_868324.1| hypothetical protein Shewana3_0680 [Shewanella sp. ANA-3]
gi|117611464|gb|ABK46918.1| Mammalian cell entry related domain protein [Shewanella sp. ANA-3]
Length = 157
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/137 (16%), Positives = 53/137 (38%), Gaps = 4/137 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+F+++ L ++ ++ + + ++ GL S V+
Sbjct: 1 MLTRKIELLVGMFLLTGLAAFLVLVFKVANIEVQTSDSSYTLTANFTNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR- 118
G+ VGR+ + LD ++ ++ +++ I T GL G ++ L+
Sbjct: 61 GGVVVGRVSKIDLDP-VKLVAVVTIVMDKRFDKFPETSSLAILTSGLLGEQFLGLTPGFV 119
Query: 119 -KEKKTIFQIATERNQR 134
+ + + R
Sbjct: 120 DDDVSMLKDGDKIDDTR 136
>gi|284034019|ref|YP_003383950.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
gi|283813312|gb|ADB35151.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
Length = 391
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 4/98 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
P ++ + S VR GI VG I + K + +
Sbjct: 23 ERVSATAYFPRAIS-VYPGSDVRILGIKVGEIESVTPAG---RTVRVKFWWDAEHKVPAG 78
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A I + + YI+L+ + + A +R
Sbjct: 79 AKAVIASPSVVADRYIQLTPAYSQGAVMADGAEIPVER 116
>gi|218699595|ref|YP_002407224.1| hypothetical protein ECIAI39_1216 [Escherichia coli IAI39]
gi|218369581|emb|CAR17350.1| conserved hypothetical protein [Escherichia coli IAI39]
Length = 877
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + I+ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 IIALMIAGWLIW-----DSYQDRGNTVTIDF-MSADGIVPGRTPVRYQGVEVGTVQDISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ K I+ D L T + T
Sbjct: 82 S-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|311743969|ref|ZP_07717775.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311313099|gb|EFQ83010.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 324
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 35/107 (32%), Gaps = 6/107 (5%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ ++ GL V+ G+ VG + G+ L I D
Sbjct: 31 VASFGQRTVTAVVEHT---AGLRVGEEVQVAGVGVGEVTGIEL---TDTAVAVTFTIDAD 84
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
PL TTA ++ L G ++E++ + IA R
Sbjct: 85 IPLGADTTAAVKVATLLGTHFLEVAPSGSGELPDDTIALARTSVPFN 131
>gi|118619038|ref|YP_907370.1| Mce family protein, Mce5C [Mycobacterium ulcerans Agy99]
gi|118571148|gb|ABL05899.1| Mce family protein, Mce5C [Mycobacterium ulcerans Agy99]
Length = 351
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 28/77 (36%), Gaps = 4/77 (5%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+ L + + GIPVG + + L + H A IR D L
Sbjct: 48 GAGYRRYTAEFLQAAA-LRAGNPIAIAGIPVGTVTSMKLVGD---HVEAGLRIRDDVVLG 103
Query: 95 PSTTATIRTQGLAGITY 111
+TATIR + G Y
Sbjct: 104 KDSTATIRVTTILGSRY 120
>gi|313649132|gb|EFS13566.1| uncharacterized yebT domain protein [Shigella flexneri 2a str.
2457T]
Length = 221
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLMTP 113
>gi|226304449|ref|YP_002764407.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183564|dbj|BAH31668.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 394
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 12/135 (8%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFN 61
+ + +V L + + + + GL ++ V+
Sbjct: 5 RWHKKLAAAGLVLGLVAIVAVALTM--FSGGFTKSTPITVTSTR--AGLVMEPNAKVKLR 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY-IELSTLR 118
G+ VGR+ + L + + K + P + + I+T + G Y +
Sbjct: 61 GVQVGRVESISLVGD---QASLKLAMDPGQMSKIPSNARVEIKTTTVFGAKYVNIVIPDD 117
Query: 119 KEKKTIFQIATERNQ 133
+ I + A +
Sbjct: 118 PSTQPIQEGAVIASD 132
>gi|253688181|ref|YP_003017371.1| Mammalian cell entry related domain protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754759|gb|ACT12835.1| Mammalian cell entry related domain protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 555
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/398 (8%), Positives = 96/398 (24%), Gaps = 25/398 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L+ V F G VG + D + + + P T+ +R +G+ +
Sbjct: 180 LNAGDPVLFRGYRVGSVETSEFDPKAR---KMRYQLFISAPYDGLVTSNVRFWKDSGVAF 236
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + A + + A+ S +
Sbjct: 237 DMSAQGMRVEMGSLTTLFSGGVSFDVPAGWELGDAAKTMAQYRLFDSQRSIQDSLYTEYK 296
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ E+I + A + T + D + I
Sbjct: 297 EY-----LLFFSESIRGLQAGAPVEFRGIRLGTVAEAPFFPKNMKQDLDDDYRIPVLIRI 351
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ +K + + + ++ + +
Sbjct: 352 EPDRFEKKIGGSFDFEQHLKQAQSLGLRASMKSANLLTGALYIDFDFYPKEKVDKKLLVL 411
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
++ + + + + IN + + ++ +
Sbjct: 412 DGYPILPTIDGGLSQIQQKLMAVLD-----KVNNLPLNPMINEATKTLAESQATMREMQK 466
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
++ +N +++ K L +D Q+ + + + N +
Sbjct: 467 TLATLNKLTSSKAMQDLPEDMQKTLLELNRSMKGFQP------------GSPAYNKMVAD 514
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+++L + + L +V+ K
Sbjct: 515 MQRLDQVLRELQPVLRTLNEKSNALVFEASGSQDPQPK 552
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/298 (10%), Positives = 80/298 (26%), Gaps = 37/298 (12%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI-------VGLFLDQEYPNHS 81
S + E ++ S+ GL + V F GI +G + + D +
Sbjct: 286 SIQDSLYTEYKEYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPFFPKNMKQDLDDDYRI 345
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I PD + + + + + A R
Sbjct: 346 PVLIRIEPD-------------------RFEKKIGGSFDFEQHLKQAQSLGLR------- 379
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ +A + + K + + + + TI L+ + ++
Sbjct: 380 ----ASMKSANLLTGALYIDFDFYPKEKVDKKLLVLDGYPILPTIDGGLSQIQQKLMAVL 435
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
P + T+ + ++ +M K + + +Q + K+ ++
Sbjct: 436 DKVNNLPLNPMINEATKTLAESQATMREMQKTLATLNKLTSSKAMQDLPEDMQKTLLELN 495
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
++ + + + ++ + L T N ++ R
Sbjct: 496 RSMKGFQPGSPAYNKMVADMQRLDQVLRELQPVLRTLNEKSNALVFEASGSQDPQPKR 553
>gi|118464506|ref|YP_881282.1| LprM protein [Mycobacterium avium 104]
gi|118165793|gb|ABK66690.1| LprM protein [Mycobacterium avium 104]
Length = 241
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 6/111 (5%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
L + + ++P V + ++ VR + + VG + + L H+L
Sbjct: 4 LRLPGTAGGGPGSYTIQAQMPDVVT-IQENTRVRVDDVNVGNVTKIELQ---DWHALVTM 59
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATERNQR 134
I D L ++TA + L G +IE + + R
Sbjct: 60 RIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPPVGRLTAGSVIPLSR 110
>gi|41408210|ref|NP_961046.1| LprM [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396565|gb|AAS04429.1| LprM [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 373
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 77/284 (27%), Gaps = 9/284 (3%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
L + + ++P V + ++ VR + + VG + + L H+L
Sbjct: 28 LRLPGTAGGGPGSYTIQAQMPDVVT-IQENTRVRVDDVNVGNVTKIELQ---DWHALVTM 83
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATERNQRAMITATPSG 143
I D L ++TA + L G +IE + + RA + T
Sbjct: 84 RIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKGEPPVGRLTAGSVIPLSRASLYPTTEQ 143
Query: 144 INYFISNA---ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+S + + + + E I+ I
Sbjct: 144 TLASVSILLNGGGIGQLQEITQAVAKAFAGREADMRSLLSQIDEFIAHTNEQTDDIIAAA 203
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ + + + + + ++ + + I + S+
Sbjct: 204 ENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTKIADTIDRVGKFSAIAADTIHQSK 263
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ V ++R + + L ++ + N
Sbjct: 264 QSLVDNLRNIAPALRSLADAGPSLTRGLDGLATYPWPASTVRNW 307
>gi|120405552|ref|YP_955381.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958370|gb|ABM15375.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 383
Score = 58.4 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS-----IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
M ++ + V V++ L L ++ ++P VD + +
Sbjct: 1 MRARAFRAIVVAAVLAGLLSGCAGWRGLNSLPLPGVQGTGPGAFQIQAQMPE-VDNIEPN 59
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
S VR + VG + + H+L + D L + TAT+ L G
Sbjct: 60 SRVRVGDVNVGHVRKIE---RQGWHALVTIELNGDVELPANATATLGQTSLLGS 110
>gi|227111928|ref|ZP_03825584.1| paraquat-inducible protein B [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 546
Score = 58.4 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/398 (9%), Positives = 95/398 (23%), Gaps = 25/398 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L+ V F G VG + D + + + P T +R +G+ +
Sbjct: 171 LNAGDPVLFRGYRVGSVETSEFDPKAR---KMRYQLFISAPYDGLVTTNVRFWKDSGVAF 227
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + A + + A+ S +
Sbjct: 228 DMSAQGMRVEMGSLTTLFSGGVSFDVPAGWELGDAAKTMAQYRLFDSQRSIQDSLYTEYK 287
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + + + + + I LI
Sbjct: 288 EYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPFFPKNMKQDLDDDYRIPVLIRIEPDRF 347
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + Q S S + + + +K+D L
Sbjct: 348 EKKIGGSFDFEQHLQQAQSLGLRASMKSANLLTGALYIDLDFYPK--EKVDKQLFVLDGY 405
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
L I + ++ + +N + + ++ +
Sbjct: 406 PVLPTIDGGLSQIQQKLMAVLDKVNN--------LPLNPMVNEATKTLAESQATLREMQK 457
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
M+ +N +++ K L +D Q+ + + + N +
Sbjct: 458 TMAALNKLTSSKAMQDLPEDMQKTLLELNRSMKGFQP------------GSPAYNKMVAD 505
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+++L + + L +V+ K
Sbjct: 506 MQRLDQVLRELQPVLRTLNEKSNALVFEASGSQDPQPK 543
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 75/291 (25%), Gaps = 37/291 (12%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI-------VGLFLDQEYPNHSLAKALIR 88
E ++ S+ GL + V F GI +G + + D + I
Sbjct: 284 TEYKEYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPFFPKNMKQDLDDDYRIPVLIRIE 343
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
PD + + + + Q A RA + +
Sbjct: 344 PD-------------------RFEKKIGGSFDFEQHLQQAQSLGLRASMKSANLLTGALY 384
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + K+ D + + + + ++ P
Sbjct: 385 IDLDFYPKEKVDKQLFVLDGYPVLPTIDGGL-----------SQIQQKLMAVLDKVNNLP 433
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ T+ + +L +M K + + +Q + K+ ++ ++ +
Sbjct: 434 LNPMVNEATKTLAESQATLREMQKTMAALNKLTSSKAMQDLPEDMQKTLLELNRSMKGFQ 493
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + ++ + L T N ++ R
Sbjct: 494 PGSPAYNKMVADMQRLDQVLRELQPVLRTLNEKSNALVFEASGSQDPQPKR 544
>gi|270156844|ref|ZP_06185501.1| putative mammalian cell entry related protein [Legionella
longbeachae D-4968]
gi|289164715|ref|YP_003454853.1| hypothetical protein LLO_1379 [Legionella longbeachae NSW150]
gi|269988869|gb|EEZ95123.1| putative mammalian cell entry related protein [Legionella
longbeachae D-4968]
gi|288857888|emb|CBJ11743.1| hypothetical protein LLO_1379 [Legionella longbeachae NSW150]
Length = 230
Score = 58.4 bits (138), Expect = 3e-06, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
F ++ GS+ GL S V + G+ +G + + + +
Sbjct: 1 MFFAARFLYKEYLLARHDTYVMFFQGSLTGLKVTSKVTYRGVKIGEVKRIEIAENKDKT- 59
Query: 82 LAKALIRPDTPLYPSTTA 99
+ + D + + A
Sbjct: 60 EVEIPVYVDFYVARTFEA 77
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/147 (9%), Positives = 46/147 (31%), Gaps = 11/147 (7%)
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+T+ + + S + +++ +D+ ++
Sbjct: 95 TQTNFLTGDAEIALIPSTKSTETFPAKKGFYNQYPIFPTIENKKSTSFSDALTSVKITLN 154
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
INN+ KE + K + + + +++ + + +
Sbjct: 155 TINNLLQSKEVAQILKHTRAMAESIEKLANNLDQNTVPVIAYFTQ-----------ALSQ 203
Query: 415 LQETVNHFDDCLNNFERNPQDIVWGRE 441
+ N F++ + R+P+ ++ G+
Sbjct: 204 FSKAANSFENLTDYLSRHPESLIRGKS 230
>gi|229494498|ref|ZP_04388261.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318860|gb|EEN84718.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 394
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 42/135 (31%), Gaps = 12/135 (8%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFN 61
+ + +V L + + + + GL ++ V+
Sbjct: 5 RWHKKLAAAGLVLGLVAIVAVALTM--FSGGFTKSTPITVTSTR--AGLVMEPNAKVKLR 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY-IELSTLR 118
G+ VGR+ + L + + K + P + + I+T + G Y +
Sbjct: 61 GVQVGRVESISLVGD---QANLKLAMDPGQMSKIPSNARVEIKTTTVFGAKYVNIVIPDD 117
Query: 119 KEKKTIFQIATERNQ 133
+ I + A +
Sbjct: 118 PSTQPIQEGAVIASD 132
>gi|226361059|ref|YP_002778837.1| Mce family protein [Rhodococcus opacus B4]
gi|226239544|dbj|BAH49892.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 427
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/307 (10%), Positives = 91/307 (29%), Gaps = 9/307 (2%)
Query: 8 TSVGLFVVSILFFS------FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+G ++ L + I+ V L S+V+ +
Sbjct: 5 VILGAGACAVAIAVTSCSSEGIYGVPLPGGPDVGDNPMHLTIQF-DDVLDLVPQSAVKVD 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+PVGR+ + + + + + ++ L + A I L G +++LS ++K
Sbjct: 64 GVPVGRVETIKVAPDG-WTADVEVVLDSSVDLAANAVAAIEQTNLLGEKFVQLSEPPEDK 122
Query: 122 KTIFQIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + AT + + + ++ ++
Sbjct: 123 DPARLEDGDTISLDRTRHATEIEQVLGALSLLLNGGGVGQLQPIVHELTTALDGREDRVR 182
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+E +T++ D + + N N +I + + ++
Sbjct: 183 GLLEQANTLIDGLNQQRDDITRALDGLDALTTRVNEQNEKIGMILDELPIAAEVLNEQRP 242
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q+ + + +D + + ++ + + + + + + T F
Sbjct: 243 QLTQMLTQLDRLGTVGTDVINRSKDNLIADLLALRPTLKALADSGDNLPNSLAFIPTVPF 302
Query: 301 LENIADS 307
+ +
Sbjct: 303 PDGVEKI 309
>gi|157146358|ref|YP_001453677.1| paraquat-inducible protein B [Citrobacter koseri ATCC BAA-895]
gi|157083563|gb|ABV13241.1| hypothetical protein CKO_02117 [Citrobacter koseri ATCC BAA-895]
Length = 552
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/404 (9%), Positives = 96/404 (23%), Gaps = 29/404 (7%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLA 107
LS V F G VG + D + + S D + + +
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSTFDPQKRSISYQLFINAPNDRLVTSNVRFWKDSGIAV 232
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+T + T+F P G+ AE T+ + D R IQ
Sbjct: 233 DLTSAGMRVEMGSLSTLFGGGV-------SFDVPEGLELGQPVAEKTAFSLYDDQRSIQD 285
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + + S + + +
Sbjct: 286 SLYTDH-------IDYLMFFKDSIRGLQPGAPLEFRGIRLGTVSKVPFFAPNMRQVFNTD 338
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
++ + ++ + + + + ++ + +D +
Sbjct: 339 YRIPVLVRIEPERLKAQLGEETDVGAHLAELLKRGLRGSLKTGNLVTGALYVDLDFYPKE 398
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + I N S + +
Sbjct: 399 PPITGIHEFNGYQIIPTVSGGLAQIQQRLMEALDKINNLPLNPMIQQATNTLSESQRTMK 458
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ +N I++ + L D Q + + + + + +
Sbjct: 459 HLQTTLDNMNKITSSQSMQQLPADMQNTLRELNRSMQGFQPGSAAYNKMVVD-------- 510
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 511 ----MQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 548
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/260 (9%), Positives = 70/260 (26%), Gaps = 13/260 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ S+ GL + + F GI +G + +
Sbjct: 282 SIQDSLYTDHIDYLMFFKDSIRGLQPGAPLEFRGIRLGTVSKVPFFAPNMRQVFNTDYRI 341
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I P+ L + + A + P
Sbjct: 342 PVLVRIEPE-RLKAQLGEETDVGAHLAELLKRGLRGSLKTGNLVTGALYVDLDFYPKEPP 400
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ + + ++ Q+++E ++K + + +T + K +
Sbjct: 401 ITGIHEFNGYQIIPTVSGGLAQIQQRLMEALDKINNLPLNPMIQQATNTLSESQRTMKHL 460
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
TT + S + + + + + + + N V ++
Sbjct: 461 QTTLDNMNKITSSQSMQQLPADMQNTLRELNRSMQGFQPGSA-----AYNKMVVDMQRLD 515
Query: 262 NTVHDVRETTQTFQEVGQKI 281
+ +++ +T E +
Sbjct: 516 QVLRELQPVLKTLNEKSNAL 535
>gi|118464427|ref|YP_881585.1| virulence factor Mce [Mycobacterium avium 104]
gi|254775054|ref|ZP_05216570.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118165714|gb|ABK66611.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 371
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 4/108 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D V + S GL + V G+PVG+I + + + + +
Sbjct: 32 DDDTITVTAQF-DSASGLYEGNVVAVLGMPVGKITKINP---RGGYVEVEFTVDRGVKVP 87
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ A + + IEL+ + + T R S
Sbjct: 88 ANAQAVTVSTSILTDRQIELTPPYRGGPVLGNHDTIGLPRTKTPVEFS 135
>gi|238763371|ref|ZP_04624335.1| Paraquat-inducible protein B [Yersinia kristensenii ATCC 33638]
gi|238698470|gb|EEP91223.1| Paraquat-inducible protein B [Yersinia kristensenii ATCC 33638]
Length = 541
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 36/281 (12%), Positives = 81/281 (28%), Gaps = 16/281 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + V F GI +G + + E +
Sbjct: 271 SIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRIGTVGDVPFFAEGMRQ-----RVD 325
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + E + + + A ER RA + +
Sbjct: 326 NDFRIP----VLIRIEP---GRFREDLGPDANFEQVLKTAKERGLRASLKSGNLLTGALF 378
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + D+ + L T + I + + I+ + V
Sbjct: 379 VDLDFY----PDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKVMQTLDKINSLPLDPMVNE 434
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + T+ + +L+ + + + +++Q + N +S
Sbjct: 435 VTKTLAESQKTMRETQKTLEALTAITSSPAMQDLPKDLQKTLNELNRSMKGFQPGSPAYN 494
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ Q + Q + L + + F +
Sbjct: 495 KMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQ 535
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 40/415 (9%), Positives = 105/415 (25%), Gaps = 44/415 (10%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L+ V F G VG + D + +R Q
Sbjct: 158 SEQAGQLNAGDPVLFRGYRVGSVETSTFDAKSR---------------------LMRYQL 196
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK-----ISD 160
G Y L T +A + + + M S F
Sbjct: 197 FIGAPYDGLVTTNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPDGVDLGKPI 256
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + + ++ + ++ + + +
Sbjct: 257 TQDKAEFKLFDNRSSIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRIGTVGDVPFF 316
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + I + + + + +R + ++ +
Sbjct: 317 AEGMRQRVDNDFRIPVLIRIEPGRFREDLGPDANFEQVLKTAKERGLRASLKSGNLLTGA 376
Query: 281 I-DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ L +K + + S + I T + + + +T
Sbjct: 377 LFVDLDFYPDAKPWKGPLEVAGYPLLPTVSGGLAQIQQKVMQTLDKINSLPLDPMVNEVT 436
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
L +S + E + ++A+ + + +D + + + + + +++
Sbjct: 437 KTLAESQKTMRETQKTLEALTAITSSPA-----------MQDLPKDLQKTLNELNRSMKG 485
Query: 400 FSQSGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
F Q G +V +Q + L +V+ E + +PK
Sbjct: 486 F-QPGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 537
>gi|110805373|ref|YP_688893.1| putative paraquat-inducible protein [Shigella flexneri 5 str. 8401]
gi|110614921|gb|ABF03588.1| putative paraquat-inducible protein [Shigella flexneri 5 str. 8401]
Length = 223
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLMTP 115
>gi|289762121|ref|ZP_06521499.1| MCE-family protein mce3A [Mycobacterium tuberculosis GM 1503]
gi|289709627|gb|EFD73643.1| MCE-family protein mce3A [Mycobacterium tuberculosis GM 1503]
Length = 425
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 13 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLAADRSGLVMDSGAKVMMRG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE-LSTLRK 119
+ VGR+ + + N + + I PD + + A I G +++ +
Sbjct: 66 VQVGRVAQIGRIEWAQNGASLRLEIDPDQIRYIPANVEAQISATTAFGAKFVDLVMPQNP 125
Query: 120 EKKTIFQIAT 129
+ + A
Sbjct: 126 SRARLSAGAV 135
>gi|254232136|ref|ZP_04925463.1| MCE-family protein mce3A [Mycobacterium tuberculosis C]
gi|124601195|gb|EAY60205.1| MCE-family protein mce3A [Mycobacterium tuberculosis C]
Length = 425
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 13 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLAADRSGLVMDSGAKVMMRG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE-LSTLRK 119
+ VGR+ + + N + + I PD + + A I G +++ +
Sbjct: 66 VQVGRVAQIGRIEWAQNGASLRLEIDPDQIRYIPANVEAQISATTAFGAKFVDLVMPQNP 125
Query: 120 EKKTIFQIAT 129
+ + A
Sbjct: 126 SRARLSAGAV 135
>gi|15841441|ref|NP_336478.1| virulence factor [Mycobacterium tuberculosis CDC1551]
gi|57116931|ref|YP_177852.1| MCE-family protein MCE3A [Mycobacterium tuberculosis H37Rv]
gi|148661775|ref|YP_001283298.1| MCE-family protein Mce3A [Mycobacterium tuberculosis H37Ra]
gi|148823180|ref|YP_001287934.1| MCE-family protein mce3A [Mycobacterium tuberculosis F11]
gi|253798986|ref|YP_003031987.1| MCE-family protein mce3A [Mycobacterium tuberculosis KZN 1435]
gi|254364785|ref|ZP_04980831.1| MCE-family protein mce3A [Mycobacterium tuberculosis str. Haarlem]
gi|289554257|ref|ZP_06443467.1| MCE-family protein mce3A [Mycobacterium tuberculosis KZN 605]
gi|297634535|ref|ZP_06952315.1| MCE-family protein mce3A [Mycobacterium tuberculosis KZN 4207]
gi|297731523|ref|ZP_06960641.1| MCE-family protein mce3A [Mycobacterium tuberculosis KZN R506]
gi|307084592|ref|ZP_07493705.1| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu012]
gi|313658856|ref|ZP_07815736.1| MCE-family protein mce3A [Mycobacterium tuberculosis KZN V2475]
gi|7478318|pir||A70889 probable mce3 protein - Mycobacterium tuberculosis (strain H37RV)
gi|13881680|gb|AAK46292.1| virulence factor [Mycobacterium tuberculosis CDC1551]
gi|38490296|emb|CAE55443.1| MCE-FAMILY PROTEIN MCE3A [Mycobacterium tuberculosis H37Rv]
gi|134150299|gb|EBA42344.1| MCE-family protein mce3A [Mycobacterium tuberculosis str. Haarlem]
gi|148505927|gb|ABQ73736.1| MCE-family protein Mce3A [Mycobacterium tuberculosis H37Ra]
gi|148721707|gb|ABR06332.1| MCE-family protein mce3A [Mycobacterium tuberculosis F11]
gi|253320489|gb|ACT25092.1| MCE-family protein mce3A [Mycobacterium tuberculosis KZN 1435]
gi|289438889|gb|EFD21382.1| MCE-family protein mce3A [Mycobacterium tuberculosis KZN 605]
gi|308365843|gb|EFP54694.1| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu012]
gi|323719531|gb|EGB28657.1| MCE-family protein mce3A [Mycobacterium tuberculosis CDC1551A]
gi|328458741|gb|AEB04164.1| MCE-family protein mce3A [Mycobacterium tuberculosis KZN 4207]
Length = 425
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 45/130 (34%), Gaps = 12/130 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 13 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLAADRSGLVMDSGAKVMMRG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE-LSTLRK 119
+ VGR+ + + N + + I PD + + A I G +++ +
Sbjct: 66 VQVGRVAQIGRIEWAQNGASLRLEIDPDQIRYIPANVEAQISATTAFGAKFVDLVMPQNP 125
Query: 120 EKKTIFQIAT 129
+ + A
Sbjct: 126 SRARLSAGAV 135
>gi|226364101|ref|YP_002781883.1| Mce family protein [Rhodococcus opacus B4]
gi|226242590|dbj|BAH52938.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 387
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/110 (16%), Positives = 35/110 (31%), Gaps = 3/110 (2%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
S+ Y +G V + F+ + + V + S L S ++
Sbjct: 8 RSRLAYVLLG--VCLLTLFAIATAVSVGVYRGSFASTVPVTLYSARSGLMLEPGSDIKMR 65
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ VGR+ + L + + + + TA I L G +
Sbjct: 66 DVVVGRVSKVQLV-DDQAQITMDIDESRTSAIPENITAVIDPTTLFGRKF 114
>gi|167625260|ref|YP_001675554.1| hypothetical protein Shal_3349 [Shewanella halifaxensis HAW-EB4]
gi|167355282|gb|ABZ77895.1| Mammalian cell entry related domain protein [Shewanella
halifaxensis HAW-EB4]
Length = 550
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/260 (9%), Positives = 76/260 (29%), Gaps = 19/260 (7%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-------HSLAKALIR 88
+ ++ + ++ GLS + V + G+ VG + + L P+ I+
Sbjct: 284 KYSLQYVMLVSDTIRGLSVGAPVEYRGVTVGEVSSVELITTDPSIMYSEAVRIPVLLSIQ 343
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
P P + L + ++ + +
Sbjct: 344 PGRIGLPDN----EQGMALMKKHNTLWIKEGLRASLKTGSLLTGSLFVELQHFDLPRLEK 399
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ I ++I+ +E + T AN +
Sbjct: 400 LDIYQNYPVIPTVKDQYSQLIDKVELFVDKLNGLPLDELTGNANVTLVNAASL------- 452
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
S+ ++T + L+ S ++ L+ + E++ ++ + + + + +
Sbjct: 453 -LSELQHTSQNLDKLLVSAEQQGLIKQLRVALESFESLSQDFSSGSQGYEGLQEAMKSIS 511
Query: 269 ETTQTFQEVGQKIDHLLSDF 288
+ + + +++ +
Sbjct: 512 DVMYELKPLLEQLKRKPNGL 531
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/470 (9%), Positives = 122/470 (25%), Gaps = 46/470 (9%)
Query: 1 MESKNYYT---SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVD-----GL 52
ME ++ V L ++ L +Y E + GL
Sbjct: 100 MEDSKFWVVSPKVALSGITGLDTLISGVYIELSPGSSKQGRNEFTALNSPPITPKGTPGL 159
Query: 53 ST------------DSSVRFNGIPVGRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTA 99
+ + G+ VG+I + + +E + A L +T
Sbjct: 160 QVTLISDKEFAYSQGDPIIYKGLTVGKIEEVHFNIKERAVYYNAFIHAPYHELLTNNTRF 219
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + + +S +TI + + + S
Sbjct: 220 WDASGLVVDLNAEGISLKTGSLQTILTNGVTFGIPDGMPLGTKINELDSFQIFDDYQDAS 279
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
++ + ++ + + ++ +T S +
Sbjct: 280 NARYKYSLQYVMLVSDTIRGLSVGAPVEYRGVT----VGEVSSVELITTDPSIMYSEAVR 335
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
I L++ I D ++ +++ + ++ +
Sbjct: 336 IPVLLSIQPGRIGLPDNEQGMALMKKHNTLWIKEGLRASLKTGSLLTGSLFVELQHFDLP 395
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+++ L + + + D S + + + + T N +
Sbjct: 396 RLEKL--------DIYQNYPVIPTVKDQYSQLIDKVELFVDKLNGLPLDELTGNANVTLV 447
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + ++ + E L K + A+ +F S+ +
Sbjct: 448 NA-ASLLSELQHTSQNLDKLLVSAEQQGLIKQLRVALESFESLSQDFSS----------- 495
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
G +Q ++ + + + L +R P +++ ++ K
Sbjct: 496 -GSQGYEGLQEAMKSISDVMYELKPLLEQLKRKPNGLIFDSGSQDLEPKK 544
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 58/460 (12%), Positives = 129/460 (28%), Gaps = 50/460 (10%)
Query: 13 FV-VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
FV + L + +Y+ V I S +G+ + ++ + +G +
Sbjct: 22 FVPIVALLIGGWMVYY-----HISNQGPTVTILF-NSAEGMEAGKTKIKSRSVTIGEVET 75
Query: 71 LFL-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQ-----------GLAGITYIELSTLR 118
+ L DQ+ A+ + L + + + L YIELS
Sbjct: 76 IKLNDQDDGVIVTARMSKNTEKMLMEDSKFWVVSPKVALSGITGLDTLISGVYIELSPGS 135
Query: 119 KEKKTIFQIA------TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
++ A T + + S + S + K + +
Sbjct: 136 SKQGRNEFTALNSPPITPKGTPGLQVTLISDKEFAYSQGDPIIYKGLTVGKIEEVHFNIK 195
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
E+ + +L NN D + K +
Sbjct: 196 ERAVYYNAFIHAPYHELLTNNTRFWDASGLVVDLNAEGISLKTGSLQTILTNGVTFGIPD 255
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-----DHLLSD 287
+ L L++ Q+ + S+ + ++ V + T + + + +
Sbjct: 256 GMPLGTKINELDSFQIFDDYQDASNARYKYSLQYVMLVSDTIRGLSVGAPVEYRGVTVGE 315
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
SS + + + A + S + D Q + +S
Sbjct: 316 VSSVELITTDPSIMYSEAVRIPVLLSIQPGRIGLPDNEQGMALMKKHNTLWIKEGLRASL 375
Query: 348 KFAEL----------------MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
K L + K++ ++ + + +K+N
Sbjct: 376 KTGSLLTGSLFVELQHFDLPRLEKLDIYQNYPVIPTVKDQYSQLIDKVELFVDKLNGL-- 433
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ L + L + +L+ +LQ T + D L + E+
Sbjct: 434 -PLDELTGNANVTLVNAASLLSELQHTSQNLDKLLVSAEQ 472
>gi|315123362|ref|YP_004065368.1| putative paraquat-inducible protein B [Pseudoalteromonas sp.
SM9913]
gi|315017122|gb|ADT70459.1| putative paraquat-inducible protein B [Pseudoalteromonas sp.
SM9913]
Length = 551
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/281 (10%), Positives = 70/281 (24%), Gaps = 13/281 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+I S+ GL + V + G VG +V + +P
Sbjct: 279 FYDFDYYLIEFEQSIRGLRVGAPVEYRGTRVGTVVE--------APANVIIDGKPAHFRA 330
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
+T + + G Y S ++ +T E RA + + +
Sbjct: 331 KNTAVPVLIKVEYGRLYHITSVAKEYWETSINEWIENGMRASLKPGNLLTGAVYVDFDFY 390
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + + T+ + + N I+ + Q T +
Sbjct: 391 TDTPKSELKKLAQYDVFPSVSSGITVLADQVSDVLNKVNNLKIEDSLAKMQSTFSEYQAL 450
Query: 215 NTFNTITDLITSLDK-----MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ + K + E + + S + + +
Sbjct: 451 ASEMRTLLNKPDTQNLPGDFNRNLEKITKSMEQFEITMRQFDKTMASYQAGSQMHYQLEQ 510
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
T + + ++ L + + L N
Sbjct: 511 TLLQIKRLTEEFQPLTRGLNEQPNMLIFDKSLPNDPQPRKQ 551
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 55/480 (11%), Positives = 123/480 (25%), Gaps = 52/480 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + F ++ L + G + + +G+ + ++ + +G+I + L
Sbjct: 18 IIPVVALFVGVWMLYQYQLNKGQTIYITM---PQAEGIIAGKTEIKVRSVKIGQIDHVRL 74
Query: 74 -DQEYPNHSLAKALIRPDTPLYPSTTATI-----------RTQGLAGITYIELSTLRKEK 121
D + + A+ D L + + L Y+ELS +
Sbjct: 75 SDSQDSVIARAQIDKNYDNLLTEDASIWVVKPRIDETGISGMSTLLSGVYLELSPGESNR 134
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAE---------------------------NT 154
E NAE
Sbjct: 135 LKKRFTLQEEPALIGKHVQGGRFKLLSYNAEVLDVSTGIFFKNYKIGQIETATFDWKNQA 194
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + +I + I+ + + N + K++
Sbjct: 195 MQYGIFIKAPYENLITLNSIFWVNSGIEIDLSADGININTGSLSKLLKGGISVGLPDQQA 254
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
SL + K ++ + + R T
Sbjct: 255 PGDLAQDGHSFSLSQSYKQALEERFYDFDYYLIEFEQSIRGLRVGAPVEYRGTRVGTVVE 314
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLE--NIADSTSNMRSSISAIREITDQRQKIISTI 332
ID + F +K + +E + TS + + S
Sbjct: 315 APANVIIDGKPAHFRAKNTAVPVLIKVEYGRLYHITSVAKEYWETSINEWIENGMRASLK 374
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ D S++ ++ S+ D K+N
Sbjct: 375 PGNLLTGAVYVDFDFYTDTPKSELKKLAQYDVFPSVSSGITVLADQVSDVLNKVNNL--K 432
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVN--HFDDCLNNFERNPQDIVWGREKG--SVKIY 448
I ++L QS ++ Q L +++ +N + +F RN + I E+ +++ +
Sbjct: 433 IEDSLAKM-QSTFSEYQALASEMRTLLNKPDTQNLPGDFNRNLEKITKSMEQFEITMRQF 491
>gi|41407952|ref|NP_960788.1| hypothetical protein MAP1854 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396306|gb|AAS04171.1| hypothetical protein MAP_1854 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 371
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 33/108 (30%), Gaps = 4/108 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D V + S GL + V G+PVG+I + + + + +
Sbjct: 32 DDDTITVTAQF-DSASGLYEGNVVAVLGMPVGKITKINP---RGGYVEVEFTVDRGVKVP 87
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ A + + IEL+ + + T R S
Sbjct: 88 ANAQAVTVSTSILTDRQIELTPPYRGGPVLGNHDTIGLPRTKTPVEFS 135
>gi|300722568|ref|YP_003711858.1| paraquat-inducible protein B [Xenorhabdus nematophila ATCC 19061]
gi|297629075|emb|CBJ89660.1| paraquat-inducible protein B [Xenorhabdus nematophila ATCC 19061]
Length = 549
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/410 (10%), Positives = 90/410 (21%), Gaps = 31/410 (7%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
I L+ V F G VG + D + L + I + P T +R
Sbjct: 164 ILTSEKAGRLTPGDPVLFRGYRVGSVETETFDPKSR---LIRYQIFINAPYDGLLTTNVR 220
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
G+ + S + + + + +S
Sbjct: 221 FWKDGGVAFDMSSQGIRVEVASLSTLFGGGVSFDVPKGWGLGSPVKEKEVFKLYDNENSI 280
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+++ + + + + T + I
Sbjct: 281 QNVLYTEHKDFLLFFSDSIRGLQQGAPVEFRGIRVGTVAKIPFYTEGVKQRFDNEFRIPV 340
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
LI + E ++ + + + + +
Sbjct: 341 LIHIEPERFSKELGNGFYTEKELREIIARGLRATLKSGNLLTGALFIDLDFYPG-----E 395
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ + + +A + + I
Sbjct: 396 KVWEGPNEIAGYEILPTVSGGLAQIQQKVI-----MALDKINSMPIEPLFIQTTRTLEES 450
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ + + M ++N I A KE L KD Q ++ + + I
Sbjct: 451 QKTIKAAYKTMQELNRILASKEVQGLPKDIQNTLYELNRSMQGIQ--------------- 495
Query: 403 SGLNDIQNLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
G LV +Q + L +V+ E K
Sbjct: 496 PGAPAYNKLVDNMQRLDQVLRELQPVLKILNNKSNALVFEAEATKDPEPK 545
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 59/225 (26%), Gaps = 31/225 (13%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S N + ++ S+ GL + V F GI VG + + +
Sbjct: 279 SIQNVLYTEHKDFLLFFSDSIRGLQQGAPVEFRGIRVGTVAKIPFYTEGVKQRFDNEFRI 338
Query: 82 LAKALIRPDT-----------------PLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
I P+ + AT+++ L +K
Sbjct: 339 PVLIHIEPERFSKELGNGFYTEKELREIIARGLRATLKSGNLLTGALFIDLDFYPGEKVW 398
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
A+ K I + IE + T T+ +
Sbjct: 399 EGPNEIAG-------YEILPTVSGGLAQIQQKVIMALDKINSMPIEPLFIQTTRTLEESQ 451
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ +++++ + +V D +NT + + +
Sbjct: 452 KTIKAAYKTMQELNRILASKEVQGLPKDIQNTLYELNRSMQGIQP 496
>gi|291085619|ref|ZP_06571130.1| paraquat-inducible protein B [Citrobacter youngae ATCC 29220]
gi|291070426|gb|EFE08535.1| paraquat-inducible protein B [Citrobacter youngae ATCC 29220]
Length = 552
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/403 (8%), Positives = 91/403 (22%), Gaps = 27/403 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSTFDAQKR-----TISYQLFINAPNDRLVTSNVRFWKD 227
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + ++T E S+ ++
Sbjct: 228 SGIAVDLTSAGMRVEMGSLSTLFGG--------GVSFDVPEGLEQGEPVGQQSAFNLYDD 279
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 280 QKSIQDSLYTDHIDYLMFFKDSIRGLQPGAPLEFRGIRLGTVSKVPFFSPNMRQVFNNDY 339
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 340 RIPVLVRIEPERLKAQLGEETDVGAHLAELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 399
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + I N S + +
Sbjct: 400 PITGVREFNGYQIIPTVSGGLAQIQQRLMDALDKINNLPLNPMIEQATNTLSESQRTMKH 459
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
+ +N I++ K L D Q + + + + N +
Sbjct: 460 LQTTLDNMNKITSSKSMQDLPADMQTTLRELNRSMQGFQP------------GSAAYNKM 507
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+++L + + L +V+ E K +PK
Sbjct: 508 VADMQRLDQVLRELQPVLKTLNDKSNALVF--EAKDKKDPEPK 548
Score = 51.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/260 (8%), Positives = 69/260 (26%), Gaps = 13/260 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ S+ GL + + F GI +G + +
Sbjct: 282 SIQDSLYTDHIDYLMFFKDSIRGLQPGAPLEFRGIRLGTVSKVPFFSPNMRQVFNNDYRI 341
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I P+ L + + A + P
Sbjct: 342 PVLVRIEPE-RLKAQLGEETDVGAHLAELLKRGLRASLKTGNLVTGALYVDLDFYPKEPP 400
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ + ++ Q++++ ++K + + +T + K +
Sbjct: 401 ITGVREFNGYQIIPTVSGGLAQIQQRLMDALDKINNLPLNPMIEQATNTLSESQRTMKHL 460
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
TT + S + + + + + + + N V ++
Sbjct: 461 QTTLDNMNKITSSKSMQDLPADMQTTLRELNRSMQGFQPGSA-----AYNKMVADMQRLD 515
Query: 262 NTVHDVRETTQTFQEVGQKI 281
+ +++ +T + +
Sbjct: 516 QVLRELQPVLKTLNDKSNAL 535
>gi|312137900|ref|YP_004005236.1| mce family protein mce1d [Rhodococcus equi 103S]
gi|311887239|emb|CBH46548.1| putative Mce family protein Mce1D [Rhodococcus equi 103S]
Length = 371
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/306 (7%), Positives = 80/306 (26%), Gaps = 11/306 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
++ V+GL S+V G+PVG + + A + L
Sbjct: 33 RTDRTTIVRVDFAYVNGLYAGSNVTVLGVPVGTVEKVEPMG---TFVRVIASVPASVELP 89
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
A + + ++E + + R+ G+ ++
Sbjct: 90 ADVHAYVLNPSVISDRHLEFDPAYQGGPRLQDGDVVPLGRSHAPIDFDGLIGSLATLAEA 149
Query: 155 SKK--------ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+S ++ +Q ++ + + A + + + ++ +
Sbjct: 150 LGPEGGNAGDLLSRAASGLQGRGDDFNRAVRDLGAATGVVGARSEDIGAVVENLNTLMAQ 209
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S + + + + + + + D V +
Sbjct: 210 LDDRQVSLDALVSDLAALGDEWSTQDLDLSEPLQDLATVFDQIDRFTAEHGDDVGAVAQN 269
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ T + + M++ + ++ N+ ++++ +
Sbjct: 270 LTALGGTLVANRSGLAEFMDLVPLLMQNLSQTVGPDDRGRIRLNVSTALTQFAVAQPLCE 329
Query: 327 KIISTI 332
+ +
Sbjct: 330 QYPMPL 335
>gi|311744207|ref|ZP_07718011.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311312380|gb|EFQ82293.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 446
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/411 (11%), Positives = 111/411 (27%), Gaps = 21/411 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLS--RSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ + + G+ V +L +Y L E +++ + +SV
Sbjct: 1 MKRLLRHVATGIAAVLLLGGCTVDLYELPLPGGAVSGEETIEFSADFADALN-VVPRTSV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+PVG++ + ++ IR D L + A IR L G ++ELS
Sbjct: 60 MVADVPVGQVESVT---RVGWNARLTMRIRDDVVLPANARAEIRQTSLLGEKFVELSAPE 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ T A + + P + E +S +
Sbjct: 117 PDPLTGSTPA-DVGRLGDGDLIPLERSGRNPEVEEVLGALS---------YVLSGGGVGQ 166
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++ +++ + + + + D + + D
Sbjct: 167 LQTITSELNQMMSGRTDEVQDTLRSLNTFVGTLDQQRDDIIAALESVNGLSATLVADKDT 226
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSKMKSKET 297
++ + + D+++ + ++ + V ++ D L++ S
Sbjct: 227 ISDAIAAAAPAVAVLQDQHDELVQVLVELDQLGVVGTRVIDEVKDDLVAGLESLEPVLRA 286
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
A + +S + D + + + E + +
Sbjct: 287 LADTGDSLVPGLTAAASYPFPIDAADTIRGDFANVVFRLQFKLTPVSEGGLIPETLQDVV 346
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKI----NRYIPSIGNNLQNFSQSG 404
+ L A+ + + + L N Q G
Sbjct: 347 QLCRTTPAAPLCSPLGGAVEQLCAVLGSLPLCEEATVEEVAGVLANIEQGG 397
>gi|317125888|ref|YP_004100000.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
gi|315589976|gb|ADU49273.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
Length = 353
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/314 (9%), Positives = 86/314 (27%), Gaps = 9/314 (2%)
Query: 1 MES--KNYYTSVGLFV--VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M + ++ L V + + + L V + V L S
Sbjct: 1 MRTSQRSRGALAALVVGVTAGVAGCSAADLPLPGGAGTGSDSYAVTVEF-ADVLDLVPQS 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
SV+ N + VG + + + ++ + + L +T A ++ L G Y+ L+
Sbjct: 60 SVKVNQVTVGSVEAIEVVG---WTAVVRLRLPASLVLPDNTVAELQQTSLLGEKYVSLAE 116
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINY-FISNAENTSKKISDSSRHIQKIIENIEKP 175
T +R P + ++ ++ +
Sbjct: 117 PTDAPPTGRLAEGDRIPLDRSARHPEIEEVLGAMSLLLNGGGVAQLKTIEVELNHAMRGR 176
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + + T + ++ +D+ + +
Sbjct: 177 SDDIRSVVHELGTFIGGLDDQKADIVRAIDSLDGLADTLSENQDTIAAALDELPKGLKVL 236
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ Q+ + ++ + + + D+ + + + +++ +
Sbjct: 237 ADQREQLTAMLTALADLGEVGTRVIRGSREDLEANLRALEPILTRLNEAGDSLPQSYQLL 296
Query: 296 ETSAFLENIADSTS 309
T F + A +
Sbjct: 297 LTYPFPASSAAAIK 310
>gi|54023084|ref|YP_117326.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014592|dbj|BAD55962.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 348
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/286 (13%), Positives = 84/286 (29%), Gaps = 9/286 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ SV VR G+ VG + L L + + + + D +
Sbjct: 51 LGKSTYTAELTEAQSV---KVGDDVRLAGVTVGAVTSLELKPD---RVVMRFTVDDDVFV 104
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA---MITATPSGINYFISN 150
T+ IR L G Y+ L E I +R + M T + N
Sbjct: 105 GDQTSLDIRMLTLVGGHYVALFPAGTEPLGDGVIPADRVRLPYSLMETFQDATAPLREVN 164
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ + +++ R + E + L T + ++ I A + I + +
Sbjct: 165 GDTLRRNLAELDRAVTDAPETLRTTLDTVGSYVDAIDRQRAQVSNAIAVADEYVTMYDGA 224
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
L+ + +A + V + +Q + V +
Sbjct: 225 KSDLRRLMENVILLEDVLIDKRAELREAVALLTSVVQRVAALAPAWESSVRPRADQLSAA 284
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
E+G ++ +++ + T E + ++ +
Sbjct: 285 IGRLTEMGGTLEPVIATTRELGEKLRTLVIPEEGLVIDQSAQTVPA 330
>gi|54024941|ref|YP_119183.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54016449|dbj|BAD57819.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 346
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/279 (15%), Positives = 90/279 (32%), Gaps = 8/279 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSI---YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+G + ++ + L + G +++ S+ L ++VR N
Sbjct: 13 ARRWRIGALALVLVVAGCGFDPSDHTLPGTG-VRGAHYRLVVEF-ESLLSLPAGATVRSN 70
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G VG + + LD + +LA IR + L T A +R + G YI L
Sbjct: 71 GAEVGAVERIRLDG---HAALADLDIRAEVGLPVGTRAELRQTTVLGDIYIALLPPPHPG 127
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + R T A + + +++++ + T A
Sbjct: 128 TDLLRDGDRIPLRDTETGPQIEQILERLAAFVNGGSATRTQDALEQLVAMMPADPAETSA 187
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ T LA + H+ + T S + + S + + +
Sbjct: 188 LAAQLGTDLAATVEHLPDLDRMIAATDAVSARLHRMREEVGFLFSETARRRLDRVPQFMT 247
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ N+ + N D +I + + E + + ++
Sbjct: 248 AVLNVVIDVNTLTTGLDWLIPRLPHINEALEKAATLLRE 286
>gi|289642557|ref|ZP_06474700.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
gi|289507645|gb|EFD28601.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
Length = 431
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 43/352 (12%), Positives = 108/352 (30%), Gaps = 21/352 (5%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDG-PMAEVIIRIPGSVDGLSTDSS--VRFNGIPVG 66
VG V I+ +I S + ++ SV G++ +SS V G+ VG
Sbjct: 22 VGALTVLIVLGIVAAIVIQSNLSPTLPWAKKSIVKAEFASVPGVNPESSNLVTIAGVRVG 81
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+I + + ++ + P P+Y + A +R + L + +
Sbjct: 82 KIASWEVTK--TGTAILSMELEPGHPVYDNARAVLR----------PNNALNEMSVELNP 129
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSR-HIQKIIENIEKPLTTTIANIET 185
+ P A+ + + ++ + ++ + L + +
Sbjct: 130 GGPPGHPLPSKGVIPLRQTIRPVQADEVLNHLDERTQLALTDLLVESDVALARSEQELPA 189
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
++ + ++ Q T + + A Q LE
Sbjct: 190 GLAATDGTVNQLQPVVEALQTRREKISQLVTALSQISTAVGGNDQRVAQLATATQQTLET 249
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + S Q+ +R+T + QE+ +++D L + S + +
Sbjct: 250 LAGNDGQLRDSLAQLPGLTDQLRKTLTSTQELTKQLDPTLDNLQSASGELP-----KTLE 304
Query: 306 DSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
S + + + K + + + +++ S + ++
Sbjct: 305 RLESTVDKLGNTVDAAKPVISKARPVVADLRPMADDIDGSLVNLRPVTRNLD 356
>gi|108801506|ref|YP_641703.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119870659|ref|YP_940611.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126437491|ref|YP_001073182.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|108771925|gb|ABG10647.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119696748|gb|ABL93821.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|126237291|gb|ABO00692.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 399
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/144 (14%), Positives = 44/144 (30%), Gaps = 6/144 (4%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMA--EVIIRIPGSVDGL--STDSSVRFNGIPVGRIVG 70
++ + + V + + GL + V FNG+ +GR+
Sbjct: 12 LAGAVALAVFCVVAATISLQFRGAFAERVTLTLLSPRAGLVVDPGAKVTFNGVEIGRVTA 71
Query: 71 LFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + + P + + A IR + G Y+ L + +
Sbjct: 72 ISARADETAPAELALSVDPRHLHVIPANVIADIRASTVFGNKYVALRSPDHPAREPISPD 131
Query: 129 TERNQRAMITATPSGINYFISNAE 152
A+ T + +S AE
Sbjct: 132 LPIRSVAVTTEFNTLFETVVSLAE 155
>gi|256376290|ref|YP_003099950.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
gi|255920593|gb|ACU36104.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
Length = 321
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/252 (9%), Positives = 76/252 (30%), Gaps = 5/252 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
GL D VR +G+ VG + + L + L + + +
Sbjct: 32 TSGTRYRAEFAE-AAGLEPDDEVRVSGMKVGEVTRVELRGD---RVLVEFRV-RGPAVGD 86
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+TA IR + L G ++ L + + + + + +
Sbjct: 87 RSTADIRIKTLLGQKFLALDSAGGDPLDPDTPIPLERTTSPYDVVDAFNGLAGTLGGLDA 146
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+++++S R + + + + + + ++S ++ + ++ T+ + +
Sbjct: 147 EQLAESFRVLSDSFRDTPEHVRGALDGLTSLSRTISTRDQELRTLLDGTEEVSGALAERA 206
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
T + ++ +L+ + S + E +
Sbjct: 207 DDVTAIVEDGNRLLAEINRRRAAISGLLDGARELSRQLSGLVADNDERLRPALEQVERVT 266
Query: 276 EVGQKIDHLLSD 287
++ ++
Sbjct: 267 DLLRREQAAFER 278
>gi|226306854|ref|YP_002766814.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226185971|dbj|BAH34075.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 340
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/288 (9%), Positives = 80/288 (27%), Gaps = 7/288 (2%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ ++ Q+ GL+ V G+ +G + + ++
Sbjct: 21 AAVVLASLQYQNLQFLKSGVGYSAVF-ADASGLAPGDEVNAAGVKIGTVDRIEVE---HG 76
Query: 80 HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
+ + L ST+A + T L G + L + + R+ +
Sbjct: 77 LARVDFTLEGSIGLGESTSAAVTTMSLLGKRAVSLDLDGPGRIAVGGEIPVERTRSAYSL 136
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
+ + + ++S+S + +++ + L + + IS + +
Sbjct: 137 PDVLGDLTTTVEDIDLDQLSESLDAVGQVMSDSAPNLRPALDGVARISDSVNRRDDMLRT 196
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ + + + + + +++ NI S
Sbjct: 197 LLSDANDVAGTLAERGPQVNALLVDGNALLGELDRRQAALGEVITNISALSTQLS---GL 253
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
V + ++ V + + + S + T +
Sbjct: 254 VHDNEAQLQPVLGKLDTVVGILQNNKDNLSQGIDGLGTYVGTLGDTVA 301
>gi|291616940|ref|YP_003519682.1| PqiB [Pantoea ananatis LMG 20103]
gi|291151970|gb|ADD76554.1| PqiB [Pantoea ananatis LMG 20103]
Length = 547
Score = 58.0 bits (137), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/402 (9%), Positives = 89/402 (22%), Gaps = 27/402 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D + + Q
Sbjct: 168 AGQLNAGDPVLFRGYRVGTVETSSFDTDKR---------------------MMTYQLFVA 206
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + + M S F D + Q
Sbjct: 207 APYDRLVTTNVRFWKDSGIAVDMSASGMRVEMGSLTTLFSGGVSFDVPDGWDLGKAAQNQ 266
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
E +I + + + + + +
Sbjct: 267 TEYHLFDDQRSIQDSLYTNHIDYLMFFSDSIRGLQVGAPVEFRGIRLGTVAEVPFMNAGT 326
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
D + I + ++ D + + + + G + L D
Sbjct: 327 AQALNNDYRVPVLIRIEPDRFISRLGENFDLEQHLQDGKKRGLRGTLKTGNLLSGALFVD 386
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + S + + + N+ S + +
Sbjct: 387 IDFYDNAPAYKGPDKVAGYEVIPTVSGGLSQIQQKLMAALDKINGLPLNNMVSEATGTLK 446
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + + + + + + T ++NR + + +
Sbjct: 447 ESQKTLRDLQRTIDNINVVTSSPAMKTLPEETQQTLRELNRSMKGLQP-----GSPAYSK 501
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ +++L + + L +V+ + G K
Sbjct: 502 LVGDMQRLDQVLRELQPVLKTLNAKSNALVFEAKPGQDPQPK 543
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 22/74 (29%), Gaps = 7/74 (9%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHS 81
S + + ++ S+ GL + V F GI +G + +
Sbjct: 277 SIQDSLYTNHIDYLMFFSDSIRGLQVGAPVEFRGIRLGTVAEVPFMNAGTAQALNNDYRV 336
Query: 82 LAKALIRPDTPLYP 95
I PD +
Sbjct: 337 PVLIRIEPDRFISR 350
>gi|293396402|ref|ZP_06640680.1| paraquat-inducible protein B [Serratia odorifera DSM 4582]
gi|291421191|gb|EFE94442.1| paraquat-inducible protein B [Serratia odorifera DSM 4582]
Length = 877
Score = 57.6 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 12/132 (9%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y + + V I S G+ + VR+ G+ VG + + L
Sbjct: 28 FIALLIAGWLVY-----SNFQERGTTVTIDF-QSAAGIVAGRTPVRYQGVDVGTVQTISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIAT 129
++ + +A I+ D L T + T LAG++ ++ +
Sbjct: 82 SKD-LRKIVVEASIKSDLEDSLRDGTQFWLVTPKASLAGVSGLDALVGGNYIGMMPGGGQ 140
Query: 130 ERNQRAMITATP 141
+ + P
Sbjct: 141 PQTHFTALDTQP 152
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 4/58 (6%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
LS +R+ GI +G++ L L E N LAKA++ P Y T A T+
Sbjct: 641 DASKLSPGMPIRYLGIDIGQVESLKLAPER-NEVLAKAVL---YPEYVDTFARFGTRF 694
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 25/111 (22%), Gaps = 1/111 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L + V F GI VG + G +L H + + + ++ + +
Sbjct: 759 LQIGTPVLFRGIEVGTVTGFYLGAMSDRIHVALRISKKYQHLVRNNSVFWLASGYNLQFG 818
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + I P K
Sbjct: 819 LTGGVIKSGTFQQFIRGGIAFATPPTIPLAPQANAGKHFLLTAEEPKDWKE 869
>gi|167970512|ref|ZP_02552789.1| MCE-family protein mce3A [Mycobacterium tuberculosis H37Ra]
gi|254550986|ref|ZP_05141433.1| MCE-family protein mce3A [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|308231993|ref|ZP_07414535.2| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu001]
gi|308369574|ref|ZP_07418316.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu002]
gi|308370875|ref|ZP_07423051.2| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu003]
gi|308372103|ref|ZP_07427408.2| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu004]
gi|308373285|ref|ZP_07431723.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu005]
gi|308374453|ref|ZP_07436106.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu006]
gi|308375734|ref|ZP_07444927.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu007]
gi|308376876|ref|ZP_07440353.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu008]
gi|308377880|ref|ZP_07480743.2| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu009]
gi|308379086|ref|ZP_07484968.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu010]
gi|308380236|ref|ZP_07489188.2| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu011]
gi|308215378|gb|EFO74777.1| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu001]
gi|308327133|gb|EFP15984.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu002]
gi|308330569|gb|EFP19420.1| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu003]
gi|308334403|gb|EFP23254.1| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu004]
gi|308338199|gb|EFP27050.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu005]
gi|308341894|gb|EFP30745.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu006]
gi|308345383|gb|EFP34234.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu007]
gi|308349686|gb|EFP38537.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu008]
gi|308354316|gb|EFP43167.1| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu009]
gi|308358258|gb|EFP47109.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu010]
gi|308362186|gb|EFP51037.1| MCE-family protein mce3A [Mycobacterium tuberculosis SUMu011]
Length = 416
Score = 57.6 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 4 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLAADRSGLVMDSGAKVMMRG 56
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ VGR+ + + N + + I PD + + A I G +
Sbjct: 57 VQVGRVAQIGRIEWAQNGASLRLEIDPDQIRYIPANVEAQISATTAFGAKF 107
>gi|54024940|ref|YP_119182.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54016448|dbj|BAD57818.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 336
Score = 57.6 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 10/101 (9%), Positives = 25/101 (24%), Gaps = 3/101 (2%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
V++++ L + GL+ +SV + G+ +G + +
Sbjct: 10 ALVLTLVTVLGVGYLALGVLRIDPTVRHNHVSVRMDHAAGLTPGASVVYRGVDIGTVEAV 69
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
P + + + G
Sbjct: 70 D---SVPGGVEIRLSYDRAHRIPADAAMAVENLSALGEPVF 107
>gi|218753678|ref|ZP_03532474.1| MCE-family protein mce3A [Mycobacterium tuberculosis GM 1503]
Length = 416
Score = 57.6 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 39/111 (35%), Gaps = 11/111 (9%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 4 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLAADRSGLVMDSGAKVMMRG 56
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ VGR+ + + N + + I PD + + A I G +
Sbjct: 57 VQVGRVAQIGRIEWAQNGASLRLEIDPDQIRYIPANVEAQISATTAFGAKF 107
>gi|262273843|ref|ZP_06051656.1| uncharacterized ABC transporter, periplasmic component YrbD
[Grimontia hollisae CIP 101886]
gi|262222258|gb|EEY73570.1| uncharacterized ABC transporter, periplasmic component YrbD
[Grimontia hollisae CIP 101886]
Length = 158
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + + ++ GL S V+ G
Sbjct: 4 NRKTEFWVGTFVLAGIVAVLLLIFQVADVKSFSRTDHYTLQAHFDNIGGLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ VGR+ + L I +++A I T GL G YI +
Sbjct: 64 VVVGRVSQISLSAPDY-VPTVSMEIDRKFGYFPETSSAAILTSGLLGEQYIGIRPGF 119
>gi|161503857|ref|YP_001570969.1| paraquat-inducible protein B [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|160865204|gb|ABX21827.1| hypothetical protein SARI_01945 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 552
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/404 (8%), Positives = 92/404 (22%), Gaps = 29/404 (7%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLA 107
LS V F G VG + D + + S D + + +
Sbjct: 173 AGQLSPGDPVLFRGYRVGSVETSMFDPQKRSISYQLFINAPNDRLVTSNVRFWKDSGIAV 232
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+T + T+F + E ++ +
Sbjct: 233 DLTSAGMRVEMGSLSTLFGGGVSFD--------------VPEGLEQGQPVAEKTAFSLYD 278
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++I+ L T + + + +
Sbjct: 279 DQKSIQDSLYTDHIDYLMFFKDSIRGLQPGAPVEFRGIRLGTVGKVPFFAPGMRQAFNDD 338
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
++ + ++ + + + + ++ + +D +
Sbjct: 339 YRIPVLVRIEPERLKAQLGENTDVGAHLADLLNRGLRASLKTGNLVTGALYVDLDFYPKE 398
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
K + + + I N + + +
Sbjct: 399 PPLKGIREFGGYQIIPTVSGGLAQIQQRLMEALDKINNLPLNPMIEQATNTLTESQRTMK 458
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ ++ I++ + L D Q + + + + N
Sbjct: 459 HLQTTLDNMDKITSSQSMQQLPADMQTTLRELNRSMQGFQP------------GSAAYNK 506
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ +++L + + L +V+ E K +PK
Sbjct: 507 MVADMQRLDQVLRELQPVLKTLNEKSNALVF--EAKDKKDPEPK 548
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/267 (11%), Positives = 84/267 (31%), Gaps = 13/267 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + + ++ S+ GL + V F GI +G + + +
Sbjct: 282 SIQDSLYTDHIDYLMFFKDSIRGLQPGAPVEFRGIRLGTVGKVPFFAPGMRQAF-----N 336
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + I + L + + + + ++
Sbjct: 337 DDYRIP--VLVRIEPERLKAQLGENTDVGAHLADLLNRGLRASLKTGNLVTGALYVDLDF 394
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
E K I + + I ++ +A I+ + I+++ Q T
Sbjct: 395 YPKEPPLKGIREFGGY------QIIPTVSGGLAQIQQRLMEALDKINNLPLNPMIEQATN 448
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
++S+ T + + ++DK+ + +Q++ ++ N ++ + +
Sbjct: 449 TLTESQRTMKHLQTTLDNMDKITSSQSMQQLPADMQTTLRELNRSMQGFQPGSAAYNKMV 508
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q +V +++ +L + K +
Sbjct: 509 ADMQRLDQVLRELQPVLKTLNEKSNAL 535
>gi|327393368|dbj|BAK10790.1| paraquat-inducible protein B PqiB [Pantoea ananatis AJ13355]
Length = 453
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/402 (9%), Positives = 89/402 (22%), Gaps = 27/402 (6%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D + + Q
Sbjct: 74 AGQLNAGDPVLFRGYRVGTVETSSFDTDKR---------------------MMTYQLFVA 112
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T IA + + M S F D + Q
Sbjct: 113 APYDRLVTTNVRFWKDSGIAVDMSASGMRVEMGSLTTLFSGGVSFDVPDGWDLGKAAQNQ 172
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
E +I + + + + + +
Sbjct: 173 AEYHLFDDQRSIQDSLYTNHIDYLMFFSDSIRGLQVGAPVEFRGIRLGTVAEVPFMNAGT 232
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID-HLLSD 287
D + I + ++ D + + + + G + L D
Sbjct: 233 AQALNNDYRVPVLIRIEPDRFISRLGENFDLEQHLQDGKKRGLRGTLKTGNLLSGALFVD 292
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + S + + + N+ S + +
Sbjct: 293 IDFYDNAPAYKGPDKVAGYEVIPTVSGGLSQIQQKLMAALDKINGLPLNNMVSEATGTLK 352
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + + + + + + T ++NR + + +
Sbjct: 353 ESQKTLRDLQRTIDNINVVTSSPAMKTLPEETQQTLRELNRSMKGLQP-----GSPAYSK 407
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ +++L + + L +V+ + G K
Sbjct: 408 LVGDMQRLDQVLRELQPVLKTLNAKSNALVFEAKPGQDPQPK 449
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 7/67 (10%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHSLAKALIR 88
+ ++ S+ GL + V F GI +G + + I
Sbjct: 190 TNHIDYLMFFSDSIRGLQVGAPVEFRGIRLGTVAEVPFMNAGTAQALNNDYRVPVLIRIE 249
Query: 89 PDTPLYP 95
PD +
Sbjct: 250 PDRFISR 256
>gi|296141842|ref|YP_003649085.1| hypothetical protein Tpau_4177 [Tsukamurella paurometabola DSM
20162]
gi|296029976|gb|ADG80746.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 356
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 35/124 (28%), Gaps = 5/124 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSN-QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
+ ++ S + + +++P S L T SSV G +G +
Sbjct: 9 IVTFVVVLAVGVSALVFGYMGVRPGTQYTTITLQLPRSAQ-LVTGSSVLLRGTRIGEVER 67
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ + + + +I G Y+E + + A
Sbjct: 68 VD---GSTRGVSVRLKYPDTNRVPVDSEVSIEQLTALGEPYVEFAPSGTDGPYFTDGAMI 124
Query: 131 RNQR 134
+R
Sbjct: 125 DPKR 128
>gi|183980443|ref|YP_001848734.1| MCE-family protein Mce1A [Mycobacterium marinum M]
gi|183173769|gb|ACC38879.1| MCE-family protein Mce1A [Mycobacterium marinum M]
Length = 434
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 15 VSILFFSFFSIYWLS----RSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRI 68
++ + + LS + ++ + GL S V +NG+ +GR+
Sbjct: 17 IAGIALFLVGLLILSLVYLQFRGDFDRKVKLTM-FSERA-GLVMDPGSKVTYNGVQIGRV 74
Query: 69 VGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
+ + ++ + + P + + A I+ + G Y
Sbjct: 75 DTISEITRDGKPAAKFVLNVYPRYLPLIPENVDAQIKATTVFGGKY 120
>gi|121604692|ref|YP_982021.1| hypothetical protein Pnap_1790 [Polaromonas naphthalenivorans CJ2]
gi|120593661|gb|ABM37100.1| Mammalian cell entry related domain protein [Polaromonas
naphthalenivorans CJ2]
Length = 343
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/107 (16%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
S ++ + +++ S +G+ + F G P+GR+ + L ++ L
Sbjct: 56 GSALYVLYARGAFESTQRLVLMAEDS-EGVVVGMDITFAGFPIGRVRRIELAEDGKARIL 114
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L S+ T+ +G+ G I T + A
Sbjct: 115 VDVAEKDAHWLRTSSVFTLV-KGIVGGPNIRAYTGLLNDPPLPDGAE 160
>gi|118616795|ref|YP_905127.1| MCE-family protein Mce1A [Mycobacterium ulcerans Agy99]
gi|118568905|gb|ABL03656.1| MCE-family protein Mce1A [Mycobacterium ulcerans Agy99]
Length = 434
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 37/106 (34%), Gaps = 11/106 (10%)
Query: 15 VSILFFSFFSIYWLS----RSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRI 68
++ + + LS + ++ + GL S V +NG+ +GR+
Sbjct: 17 IAGIALFLVGLLILSLVYLQFRGDFDRKVKLTM-FSERA-GLVMDPGSKVTYNGVQIGRV 74
Query: 69 VGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
+ + ++ + + P + + A I+ + G Y
Sbjct: 75 DTISEITRDGKPAAKFVLNVYPRYLPLIPENVDAQIKATTVFGGKY 120
>gi|300703175|ref|YP_003744777.1| paraquat-inducible protein b (pqib) [Ralstonia solanacearum
CFBP2957]
gi|299070838|emb|CBJ42139.1| putative paraquat-inducible protein B (pqiB) [Ralstonia
solanacearum CFBP2957]
Length = 558
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 39/399 (9%), Positives = 108/399 (27%), Gaps = 39/399 (9%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
S+ + T + V + I VG++ G LD++ + + P +
Sbjct: 191 SLGSVETGAPVYYRHIEVGQVTGTALDKDGAG---VTVDVFVEAPYH------------- 234
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
Y+ T + + R + + + + S
Sbjct: 235 --RYVGRDTQWRHASGLGLRLDAAGLRLNTESFQA-----MLLGGIAFQPSSGQPVGETA 287
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + ++ A + H D+ + V F +T++
Sbjct: 288 PDGTVFSLQSGDFGTTDSPDGKPAVVVMHFDQSLRGLSVGAAVDFRGVQFGEVTNVGVEF 347
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
D + + + + + +R+ + +LL++
Sbjct: 348 DPKTRTFVMPVTLSLYPDRLGQAFRASSEYGDTAAAKALLRKLVAQGLRGQLRTGNLLTN 407
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL--NDS 345
+ N ++ + A+ I + + + I + + +
Sbjct: 408 -----QLYVALDMFPNAPPVQLDLSRTPIALPTIPNTLDDLQAQIADLARTLDRVPLDQL 462
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+ + + L + L A+ + + R + + S
Sbjct: 463 GAHLDQSLDHARRLFTLADAQ-LAPQARTMLASARQAFDAAQAAVQS--------PLLLP 513
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ +L + D + ++P+ +VWG +
Sbjct: 514 TELSQAREQLAHALRALDALTDTIAQHPESLVWGSTADT 552
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG--LFLDQEYPNHS-LAK 84
++ DG A V++ S+ GLS ++V F G+ G + + D +
Sbjct: 300 FGTTDSPDGKPAVVVMHFDQSLRGLSVGAAVDFRGVQFGEVTNVGVEFDPKTRTFVMPVT 359
Query: 85 ALIRPD 90
+ PD
Sbjct: 360 LSLYPD 365
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 34/439 (7%), Positives = 98/439 (22%), Gaps = 37/439 (8%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE-Y 77
F + + Q G E+ + +G+ + V++N + +G + + L +
Sbjct: 49 FMAALVSIGLVAGQLRGRGPEITLSFLD-GEGIEPGKTPVKYNDVGIGTVTAVRLSTDLS 107
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ T I G G + + + E +
Sbjct: 108 RVFVTVRLTQEAADFAAKGTRFWIVRPRAGTRGASGLGTLLSGTYIGADRSGSHEPETQF 167
Query: 136 MITATPSGINYFISNAENTSKKIS--------DSSRHIQKIIENIEKPLTTTIANIETIS 187
+P +++ A S ++ + L A +
Sbjct: 168 TGLESPPVVSFRQKGARFVLHGPSLGSVETGAPVYYRHIEVGQVTGTALDKDGAGVTVDV 227
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
V A ++ + + + + Q +
Sbjct: 228 FVEAPYHRYVGRDTQWRHASGLGLRLDAAGLRLNTESFQAMLLGGIAFQPSSGQPVGETA 287
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
F S T + Q + L + + +
Sbjct: 288 PDGTVFSLQSGDFGTTDSPDGKPAVVVMHFDQSLRGL--SVGAAVDFRGVQFGEVTNVGV 345
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK------------ 355
+ ++ + + + + + +L+++
Sbjct: 346 EFDPKTRTFVMPVTLSLYPDRLGQAFRASSEYGDTAAAKALLRKLVAQGLRGQLRTGNLL 405
Query: 356 -------INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
++ A+ T +T + + I + L L+ +
Sbjct: 406 TNQLYVALDMFPNAPPVQLDLSRTPIALPTIPNTLDDLQAQIADLARTLDRV---PLDQL 462
Query: 409 QNLVRKLQETVNHFDDCLN 427
+ + + +
Sbjct: 463 GAHLDQSLDHARRLFTLAD 481
>gi|240170054|ref|ZP_04748713.1| MCE-family protein Mce4A [Mycobacterium kansasii ATCC 12478]
Length = 400
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 38/112 (33%), Gaps = 10/112 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRF 60
S+ V +++ L + +LS VI+ P GL + V+F
Sbjct: 5 SRRTSVRVAAALLAGLMVGSAVLTYLS-YTAAFTSTDTVIVSAPR--AGLVMEKGAKVKF 61
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
G+ VG + + + + + IR + + T I + G
Sbjct: 62 RGVQVGTVEDITYSGD---QARLRLAIRSGEMHFIPSNATVRIAGNTIFGAK 110
>gi|227329753|ref|ZP_03833777.1| paraquat-inducible protein B [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 546
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/403 (10%), Positives = 104/403 (25%), Gaps = 35/403 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L+ V F G VG + D + +R Q Y
Sbjct: 171 LNAGDPVLFRGYRVGSVETSEFDPKARK---------------------MRYQLFISAPY 209
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L T +A + + + M S F +
Sbjct: 210 DGLVTTNVRFWKDSGVAFDMSAQGMRVEMGSLTTLFSGGVSFDVPAGWELGD-------- 261
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
K + S + + + ++ ++ L T +
Sbjct: 262 AAKTMAQYRLFDSQRSIQDSLYTEYKEYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPF 321
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++++ I V ++ I D + + Q +G + ++ +
Sbjct: 322 FPRNMKQELDDDYRIPVLIRIEPDRFEKKIGGSFDFEQHLKQAQSLGLRASMKSANLLTG 381
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + D + + I +I + + + +NL +
Sbjct: 382 ALYIDLDFYPKEKVDKQLFVLDGYPVLPTIDGGLSQIQQKLMAVLDKVNNLPLNPMVNEA 441
Query: 352 LMSKINNISALKENNSLFKDAQRAMHT--FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ + + L+E + + +D E + + + + +++ F Q G
Sbjct: 442 TKTLTESQATLREMQKTLATLNKLTSSKAMQDLPEDMQKTLLELNRSMKGF-QPGSPAYN 500
Query: 410 NLVRKLQET---VNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+V +Q + L +V+ K
Sbjct: 501 KMVADMQRLDLVLRELQPVLRTLNEKSNALVFEASGSQDPQPK 543
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 21/69 (30%), Gaps = 7/69 (10%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + E ++ S+ GL + V F GI +G + +
Sbjct: 277 SIQDSLYTEYKEYLLFFSESIRGLQAGAPVEFRGIRLGTVAEAPFFPRNMKQELDDDYRI 336
Query: 82 LAKALIRPD 90
I PD
Sbjct: 337 PVLIRIEPD 345
>gi|324997546|ref|ZP_08118658.1| virulence factor Mce family protein [Pseudonocardia sp. P1]
Length = 438
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 44/404 (10%), Positives = 123/404 (30%), Gaps = 38/404 (9%)
Query: 3 SKNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ V F L FSF + + Y V + +P V L V
Sbjct: 11 NNTRLVVVIAFTALCGLIFSFLWVNSGGKIPGYAPAAYRVAVDVPR-VANLVYFGDVMIA 69
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG++V + E + + + P + PL+ T +R + L T++E++
Sbjct: 70 GVRVGKVVDV---AETGDRARVSMELEPANAPLHDGATVRVRAKSLIEETFLEITDGTG- 125
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
P G + +AE + + +++ +
Sbjct: 126 -----------------AEIPDGASLPEGSAEPPVQVNDVLHTLDEPTRQSLGSAVRAAG 168
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ + +++ ++ + + Q + +++ T+ ++
Sbjct: 169 LSTDGSQQAVSDAVAGLGALGRNGQDALDALAAQSEDLKQLTGTTATVLAALNTQQGQIG 228
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q++++ + ++ + + + + + + L +
Sbjct: 229 QLVQDTDTLTQATSGGAEDIREVMRKLPPVLDSARTASGGLSTLAGSLGPVADNLNA--- 285
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+A+ E+ + +T+ ++ + + L ++ +
Sbjct: 286 ---------AAPDLSAALVELPATSADLRATLPPLDGTLDKAPATLDRVPRLTDDVDGLI 336
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
A + L +D A+ + + + + G +L G
Sbjct: 337 AP--TSDLLRDVNPALTYLQPYAPDVVALFQNFGASLAGGDGRG 378
>gi|289760712|ref|ZP_06520090.1| MCE-family protein mce2D [Mycobacterium tuberculosis GM 1503]
gi|289708218|gb|EFD72234.1| MCE-family protein mce2D [Mycobacterium tuberculosis GM 1503]
Length = 268
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 33/132 (25%), Gaps = 3/132 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
Y ++ L V+ G+ VG I + +
Sbjct: 39 RLYRKLTTTTVVAYFSEALALYPGDKVQIMGVRVGSIDKIEPAGD---KMRVTLHYSNKY 95
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + TA+I L I+LS + A +R + + I+
Sbjct: 96 QVPATATASILNPSLVASRTIQLSPPYTGGPVLQDGAVIPIERTQVPVEWDQLRDSINGI 155
Query: 152 ENTSKKISDSSR 163
+
Sbjct: 156 LRQLGPTERQPK 167
>gi|269128537|ref|YP_003301907.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268313495|gb|ACY99869.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 440
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 76/287 (26%), Gaps = 9/287 (3%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD----QEYPNHSLA 83
L V +V L S V+ N + VG++ + L ++
Sbjct: 44 LPGGPDLGERPITVRAEF-ANVLDLVPQSVVKLNDVSVGKVTKVELQRGSTPGQSWQAVV 102
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITY---IELSTLRKEKKTIFQIATERNQRAMITAT 140
+R D L + ATI L G + + R A
Sbjct: 103 TFKLRRDVNLPDNARATITQTSLLGEKFVALSPPVGETPSADRLGDGDLIPLSRTGRGAE 162
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+ + + + S Q++ + T + + + T + H +
Sbjct: 163 IEEVLSAM-SLLLNGGGLEQVSTITQELNAVMNGRTDTIKSVLHKVDTFVGTLDRHRGAI 221
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ S I Q + + ++ +
Sbjct: 222 VRAIDSIDRLSKQLADERATITATIDQTGPAIEILEQNRADLTRMLVSLDKLSRTTTRVI 281
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ D+ ++ Q Q ++ S+ +++ T F A+
Sbjct: 282 NASHADMVANLKSLQTTLQYLNKAGSNLPKALETMTTFPFPATFANV 328
>gi|269124778|ref|YP_003298148.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268309736|gb|ACY96110.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 430
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/116 (18%), Positives = 42/116 (36%), Gaps = 5/116 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ ++ F + + +++ + + P V S GLS D V G+
Sbjct: 5 RRIVINLVFFAALGVVLAIWAVTSIIDIDALRRP-VPVTAEF-DSSPGLSPDLEVTHLGV 62
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
VG+I + L P + + D + + A + + G +IEL+
Sbjct: 63 RVGKIGEVRL---KPGSVHVRIDLDRDARVPSTVGARVMRKSAIGEPHIELTAPPP 115
>gi|206602873|gb|EDZ39354.1| Putative ABC transporter [Leptospirillum sp. Group II '5-way CG']
Length = 304
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+Y ++ + + + S G+S V+ GI +G + + + +
Sbjct: 32 GLYEVAVNQHAFDRRYTIYTVLDQSY-GISPGVPVKLAGIRIGSVESVDFTKLNQIKVVM 90
Query: 84 KALIRPDTPLYPSTTATI-RTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ L + + + T+ ++ ++G + +S I R++
Sbjct: 91 RLLSKYQNKIRKDSFLTVKKSGIISGDVTLRISLGSPWLPIILPNHKIRSETP 143
>gi|89108674|ref|AP_002454.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|90111340|ref|NP_416348.2| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|170081490|ref|YP_001730810.1| hypothetical protein ECDH10B_1973 [Escherichia coli str. K-12
substr. DH10B]
gi|238901049|ref|YP_002926845.1| hypothetical protein BWG_1648 [Escherichia coli BW2952]
gi|300951449|ref|ZP_07165287.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300956659|ref|ZP_07168935.1| hypothetical protein HMPREF9547_02475 [Escherichia coli MS 175-1]
gi|301645652|ref|ZP_07245580.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|307138494|ref|ZP_07497850.1| mce-related protein [Escherichia coli H736]
gi|12643679|sp|P76272|YEBT_ECOLI RecName: Full=Uncharacterized protein yebT
gi|1736481|dbj|BAA15647.1| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|87081984|gb|AAC74904.2| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|169889325|gb|ACB03032.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|238860494|gb|ACR62492.1| conserved protein [Escherichia coli BW2952]
gi|260449045|gb|ACX39467.1| Mammalian cell entry related domain protein [Escherichia coli DH1]
gi|300316537|gb|EFJ66321.1| hypothetical protein HMPREF9547_02475 [Escherichia coli MS 175-1]
gi|300449301|gb|EFK12921.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|301076081|gb|EFK90887.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|315136477|dbj|BAJ43636.1| hypothetical protein ECDH1ME8569_1780 [Escherichia coli DH1]
gi|323940500|gb|EGB36691.1| hypothetical protein ERDG_02849 [Escherichia coli E482]
Length = 877
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIAS---WLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 870
>gi|256022502|ref|ZP_05436367.1| hypothetical protein E4_03954 [Escherichia sp. 4_1_40B]
gi|331642445|ref|ZP_08343580.1| mce related protein [Escherichia coli H736]
gi|331039243|gb|EGI11463.1| mce related protein [Escherichia coli H736]
Length = 879
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIAS---WLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDISLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 872
>gi|324999490|ref|ZP_08120602.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 438
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/352 (10%), Positives = 101/352 (28%), Gaps = 15/352 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS--SVRFNGIPVG 66
V + + + + + V GL+ DS VR G+PVG
Sbjct: 11 LVAAVAIVAIGVGSGAAILSNYAFDAPWQKRFVFSATFDKAPGLNVDSSQEVRIAGVPVG 70
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + + + + + I P ++ + RT+ + Y+ L + +
Sbjct: 71 EV--VGAEADQGDDATLRISIDPGHQVFENARLEYRTKTPLNVPYLALVPGGPPAALLAE 128
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
AT + P E ++ + + ++ + L A +
Sbjct: 129 NATVPVSQTTRNIQPY---------EILNELDEHTQESLTSLLNESDTALADAPAQLPGG 179
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
++ + +M + Q T + D + + + L +
Sbjct: 180 LRATDATVATLQPVMESLQQRRELIQKLVTSLSRISTAAGRDDQRLTRLVASLQETLSVL 239
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE--TSAFLENI 304
S ++ T +RE + ++ ++D +L + +
Sbjct: 240 GARDRELTDSLGKLPGTTGTLREALASTSDLTTELDPVLESLDQASGELPDTVRRVTDTV 299
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ + ++ + + + + +L + + ++
Sbjct: 300 RKAGPVVDTARPVVAKARPVVADLRPLVGDARVALDDLKPVTGHLPDATERL 351
>gi|315445069|ref|YP_004077948.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315263372|gb|ADU00114.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 395
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/155 (11%), Positives = 45/155 (29%), Gaps = 6/155 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSV 58
M+S +GL ++ + L + + P GL + D+ V
Sbjct: 1 MKSAVIRPVIGLISLAAVASLTAVSVTL--FRDSFAESVPLNVISPR--AGLVMNPDAKV 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ +G+ VG++V + + + T I + + G + L
Sbjct: 57 QLHGVQVGKVVSIDYRDDGTAALHLAIDPARQNIIPADVTVDIASTTVFGAKSVRLVPPA 116
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ ++ + ++ +
Sbjct: 117 DPSPSPVHAGQILGADRVMIEANTLFEQLVAVLDT 151
>gi|320540473|ref|ZP_08040123.1| putative paraquat-inducible protein B [Serratia symbiotica str.
Tucson]
gi|320029404|gb|EFW11433.1| putative paraquat-inducible protein B [Serratia symbiotica str.
Tucson]
Length = 548
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/270 (12%), Positives = 83/270 (30%), Gaps = 20/270 (7%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHSLAKALIRPDTPL 93
++ SV GL + V F GI +G + + + + I PD
Sbjct: 290 YLLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYKNGMVQRLDNDYRIPVLIRIEPD--- 346
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
R + G ++ + L+ + + + + + Y AE
Sbjct: 347 --------RFRQQLGDSFAFENHLKDAARRGMRASLKSANMLTGSLYVDLDFYPQEKAEK 398
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
++ + + + + L I K + +Q T ++
Sbjct: 399 DPHELFGYPLMLTTSGGLTQIQQKLMQVLDKINTIPLNPMIDEATKALAESQKTMKTTQQ 458
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
T + D+I S + + D+Q+ Q L + ++++ + + + +
Sbjct: 459 TMTS--LNDIIASKEMKVLPQDMQRTLQELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRE 516
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
Q V + ++ + + S +
Sbjct: 517 LQPVLRTLNEKSNALVFEAASSHDPQPKKA 546
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 47/456 (10%), Positives = 113/456 (24%), Gaps = 42/456 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIP---GSVDGLST------------D 55
G+ + L + + + ++ P GL
Sbjct: 116 GVSGLGTLLSGAYIELQPGNTGKVGQDNYPLLNAPPLASPDAKGLRIVLDSEKSGQMNAG 175
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
V F G VG + + D + P T +
Sbjct: 176 DPVLFRGYRVGSVETRYFDPNMRA-----MRYQLFIPAPYDQLVTRNVRFWKDSGVAFDM 230
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + + +AT + + P G + E ++ D+ R IQ +
Sbjct: 231 SAQGMRVEMGSLATLFSG-GVSFDVPDGWDRGELAKEKAEYQLFDNQRSIQDSLY----- 284
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
T + + + + + N + + + ++ I
Sbjct: 285 --TVHKDYLLFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFYKNGMVQRLDNDYRIPVLIR 342
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
++ + + ++ + +D + + K +
Sbjct: 343 IEPDRFRQQLGDSFAFENHLKDAARRGMRASLKSANMLTGSLYVDLDFYPQEKAEKDPHE 402
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
L + I+ + + + + M+
Sbjct: 403 LFGYPLMLTTSGGLTQIQQKLMQVLDKINTIPLNPMIDEATKALAESQKTMKTTQQTMTS 462
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+N+I A KE L +D QR + + + N + +++L
Sbjct: 463 LNDIIASKEMKVLPQDMQRTLQELNRSMKGFQP------------GSPAYNKMVGDMQRL 510
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + L +V+ E S +PK
Sbjct: 511 DQVLRELQPVLRTLNEKSNALVF--EAASSHDPQPK 544
>gi|260598309|ref|YP_003210880.1| hypothetical protein CTU_25170 [Cronobacter turicensis z3032]
gi|260217486|emb|CBA31637.1| Uncharacterized protein yebT [Cronobacter turicensis z3032]
Length = 889
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 50/145 (34%), Gaps = 14/145 (9%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + V L + + I+ Y+ V I S DG+ + VR+
Sbjct: 29 KRRISPFWI--LPVIALMIACWLIW-----TTYEERGTTVTIDF-MSADGIVAGRTPVRY 80
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ--GLAGITYIELST 116
G+ VG + + L ++ N I+ D L T + T LAG++ ++
Sbjct: 81 QGVEVGTVQDIRLSED-LNKIEVTVSIKNDMKDALRDQTQFWLVTPKASLAGVSGLDALV 139
Query: 117 LRKEKKTIFQIATERNQRAMITATP 141
+ R+ + P
Sbjct: 140 GGNYIGMMPGEGEPRDHFRALDTQP 164
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 27/115 (23%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 769 AGSLNIGTPVLFRGIEVGTVTGMSL-GSMSDRVMVAMRISKRYQHLVRENSVFWLASGYS 827
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P ++ K
Sbjct: 828 LNFGLVGGVVKTGTFNQFIRGGIAFATPPETPLAPKAQAGKHFLLQDGEPKEWRQ 882
>gi|209545502|ref|YP_002277731.1| Mammalian cell entry related domain-containing protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|209533179|gb|ACI53116.1| Mammalian cell entry related domain protein [Gluconacetobacter
diazotrophicus PAl 5]
Length = 317
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 85/267 (31%), Gaps = 11/267 (4%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
F +I + P + I +P V GLS + + GI G I + ++
Sbjct: 35 FAAIVEAGVLRDWLTPAGRLQIVLPDGGVSGLSVGNDIEVLGIHAGTIRRIRINPSGGMF 94
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
++A + + +TATIR + + + + A +
Sbjct: 95 AVADIDPDIEPYIRRDSTATIRRRFVVAGADYIDISRGTGTPMDWHYAVLT-----AHSA 149
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
P+ + + +I Q ++ ++ +T + T+ ++ ++ +
Sbjct: 150 PNPADMITQTFADIRARILPVLDSSQHMMSQLDATITDMHSGKGTVGRLMTSD-----DL 204
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ ++ S ++ T + S + V ++++ ++ + +
Sbjct: 205 IRQSEKMVASLNTAIAQLTPVEKRLSAVMAKADSSMANVRASTDDLRKATPRLPAITRDL 264
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSD 287
T ++ Q + L
Sbjct: 265 QETSAELPVLLTQAQVTAASLQKLTDQ 291
>gi|148977764|ref|ZP_01814320.1| putative ABC superfamily transport protein [Vibrionales bacterium
SWAT-3]
gi|145962978|gb|EDK28248.1| putative ABC superfamily transport protein [Vibrionales bacterium
SWAT-3]
Length = 163
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKLELWVGTFVIAGICAILIMIFQVADVKGLGSNHTYNLKATFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ VGR+ + LD E + I +++A I T GL G YI L
Sbjct: 64 VVVGRVKSIELDTESYLPV-VEMSIDAKYSRFPDTSSAQILTSGLIGEQYISLVPGF 119
>gi|183982886|ref|YP_001851177.1| MCE-family protein Mce3A [Mycobacterium marinum M]
gi|183176212|gb|ACC41322.1| MCE-family protein Mce3A [Mycobacterium marinum M]
Length = 461
Score = 57.6 bits (136), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 35/100 (35%), Gaps = 8/100 (8%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
ILF + + ++ + V + + GL + V G+ VGR+ +
Sbjct: 17 VILFAAIVAAILVTTVSFTGTLRPHVAVTLTSERSGLVMDAGAKVMLRGVQVGRVRQI-- 74
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ + + + I PD + + A I G +
Sbjct: 75 --DSNHGASLELEIDPDQIRYIPANVEAQISATTAFGAKF 112
>gi|126175855|ref|YP_001052004.1| hypothetical protein Sbal_3660 [Shewanella baltica OS155]
gi|152999233|ref|YP_001364914.1| hypothetical protein Shew185_0694 [Shewanella baltica OS185]
gi|160873846|ref|YP_001553162.1| hypothetical protein Sbal195_0724 [Shewanella baltica OS195]
gi|217971906|ref|YP_002356657.1| Mammalian cell entry related domain-containing protein [Shewanella
baltica OS223]
gi|304411203|ref|ZP_07392818.1| Mammalian cell entry related domain protein [Shewanella baltica
OS183]
gi|307306498|ref|ZP_07586241.1| Mammalian cell entry related domain protein [Shewanella baltica
BA175]
gi|125999060|gb|ABN63135.1| Mammalian cell entry related domain protein [Shewanella baltica
OS155]
gi|151363851|gb|ABS06851.1| Mammalian cell entry related domain protein [Shewanella baltica
OS185]
gi|160859368|gb|ABX47902.1| Mammalian cell entry related domain protein [Shewanella baltica
OS195]
gi|217497041|gb|ACK45234.1| Mammalian cell entry related domain protein [Shewanella baltica
OS223]
gi|304350396|gb|EFM14799.1| Mammalian cell entry related domain protein [Shewanella baltica
OS183]
gi|306910789|gb|EFN41217.1| Mammalian cell entry related domain protein [Shewanella baltica
BA175]
gi|315266073|gb|ADT92926.1| Mammalian cell entry related domain protein [Shewanella baltica
OS678]
Length = 157
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 52/136 (38%), Gaps = 2/136 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+F+++ L ++ ++ I ++ GL S V+
Sbjct: 1 MLTRKIELLVGVFLLTGLAAFLVLVFNVANIEVKSSDSTYTIKANFTNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR-- 118
G+ VGR+ G+ LD + + + +++ I T GL G ++ L+
Sbjct: 61 GGVVVGRVSGIDLDPVKLVAVVTLVMDKRYDKFPETSSLAILTSGLLGEQFLGLTPGFVD 120
Query: 119 KEKKTIFQIATERNQR 134
+ + + R
Sbjct: 121 DDVSMLKDGDKIDDTR 136
>gi|111023088|ref|YP_706060.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110822618|gb|ABG97902.1| possible MCE family protein [Rhodococcus jostii RHA1]
Length = 349
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/315 (12%), Positives = 89/315 (28%), Gaps = 9/315 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYW----LSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M + S+ ++ + LS DGP ++ + G VD + +
Sbjct: 1 MTIRTRTKSLTAALIVGMALPVAGCSLSLQDLSVGRSPDGPSYQISAQFDG-VDRVVPGA 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
VR VGR+ + + + IR D P+ TA I G ++ L
Sbjct: 60 EVRVGQEVVGRVSDVS---TRDFTARIEMRIRDDVPIPQDATARIELPTALGNPFVRLEV 116
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + T R ++ I + ++
Sbjct: 117 GDAAGAPMSEGDTIPLDRTSRGPDIESGLAALATV-LNGSGIDQMHAIMNELTVAFAGRS 175
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
++ ++ L H D++ + + D + + +
Sbjct: 176 DKVRELVDMLNDTLGVVDDHRDELDRAMVASNAFAAELAAGQPTLDRAMTDLAPAVDLLV 235
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ +QI+ + +S ++ + + ++ V +D S + + S
Sbjct: 236 SQRDQIVALMGEASRLSREAQHVLGSAGSELSAEISDAGAVLTALDGFESQLAPTLNSVA 295
Query: 297 TSAFLENIADSTSNM 311
T A
Sbjct: 296 TFLGGFAAATPGDYT 310
>gi|269216996|ref|ZP_06160850.1| hypothetical membrane protein [Slackia exigua ATCC 700122]
gi|269129803|gb|EEZ60887.1| hypothetical membrane protein [Slackia exigua ATCC 700122]
Length = 728
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 44/429 (10%), Positives = 122/429 (28%), Gaps = 18/429 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAE--VIIRIPGSVDGLSTD-SSVRFN-GIP 64
+G+ V+ L W + + +D + + + G +D + V N G
Sbjct: 31 VIGIIVLMGLVLVPPMYAWFNIAGSWDPYGHTEGLKVAVANEDAGYESDLTPVDINMGDA 90
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
V + L D + +++ A + +G + S +
Sbjct: 91 V--VSSLRADDSFDWVFVSEDEAVEGIRSGRYYAAIVIPEGFSADMMTLFSPDVTHSEIT 148
Query: 125 FQIATERNQRAMITATP---SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ + N A S + T K + S + ++ T
Sbjct: 149 YYTNEKENPIAPRITEKGAASVQDSVRVKFTETVDKAALSLASDLVSYLDGDQVSTYAAR 208
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
++ + S M + + +S + ++ + +
Sbjct: 209 MDGHMADAARDMRSAEGDMRAFSSLMTAASGLSDASASMLSSSKDASSGAVSSITDAASG 268
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS--------KMK 293
+ + + ++ SD S+
Sbjct: 269 LSDASDSFDAATGAVQGALAQSLAGFDGLDAEVTSALDDAQGRSSDASAILRSAAQEAED 328
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN-LNDSSQKFAEL 352
S+ + + + + +AI + + + + + +D+S + +
Sbjct: 329 SRVAYESVRDAVAAADTSGEATAAIDRVIAELAALQQNLGDAADALDAGTSDASAQIDTV 388
Query: 353 MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
S I + A + S D ++++ + I+ ++ ++L + + S + +L
Sbjct: 389 RSSIADAKASISDVSGSDDLRKSLDALTASLGDISTKSSTVASDLADVAGSLSRNAGSLS 448
Query: 413 RKLQETVNH 421
+L + +
Sbjct: 449 SRLSDAASS 457
>gi|162148731|ref|YP_001603192.1| putative ABC transporter substrate-binding protein
[Gluconacetobacter diazotrophicus PAl 5]
gi|161787308|emb|CAP56902.1| putative ABC transporter substrate-binding protein
[Gluconacetobacter diazotrophicus PAl 5]
Length = 317
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/267 (11%), Positives = 85/267 (31%), Gaps = 11/267 (4%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
F +I + P + I +P V GLS + + GI G I + ++
Sbjct: 35 FAAIVEAGVLRDWLTPAGRLQIVLPDGGVSGLSVGNDIEVLGIHAGTIRRIRINPSGGMF 94
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
++A + + +TATIR + + + + A +
Sbjct: 95 AVADIDPDIEPYIRRDSTATIRRRFVVAGADYIDISRGTGTPMDWHYAVLT-----AHSA 149
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
P+ + + +I Q ++ ++ +T + T+ ++ ++ +
Sbjct: 150 PNPADMITQTFADIRARILPVLDSSQHMMSQLDATITDMHSGKGTVGRLMTSD-----DL 204
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ ++ S ++ T + S + V ++++ ++ + +
Sbjct: 205 IRQSEKMVASLNTAIAQLTPVEKRLSAVMAKADSSMANVRASTDDLRKATPRLPAITRNL 264
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSD 287
T ++ Q + L
Sbjct: 265 QETSAELPVLLTQAQVTAASLQKLTDQ 291
>gi|325674880|ref|ZP_08154567.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|325554466|gb|EGD24141.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 411
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 14/144 (9%)
Query: 1 MESKNYYTSVGLFV-VSILFFSFFSIYWLS-------RSNQYDGPMAEVIIRIPGSVDGL 52
M + + GL + W + EV I++P +V L
Sbjct: 1 MNTFSTARRAGLTASLLAATLVLSGCEWSGLNSVPLPGTQGRGDGAYEVEIQMP-NVTTL 59
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
+ +S VR + VG + + + H+L A + D L ++TA I L G ++
Sbjct: 60 TQNSPVRVGDVTVGSVSKIEVQG---WHALVTASLNGDVDLPANSTAKIGQTSLLGSAHL 116
Query: 113 E--LSTLRKEKKTIFQIATERNQR 134
E K + +R
Sbjct: 117 ELAPPAGEAPKGKLADGDVIPLER 140
>gi|124514234|gb|EAY55748.1| putative ABC transporter [Leptospirillum rubarum]
Length = 304
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 40/113 (35%), Gaps = 2/113 (1%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+Y ++ + + + S G+S V+ GI +G + + + +
Sbjct: 32 GLYEVAVNQHAFDRRYTIYTVLDQSY-GISPGVPVKLAGIRIGSVESVDFTKLNQIKVVM 90
Query: 84 KALIRPDTPLYPSTTATI-RTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ L + + + T+ ++ ++G + +S I R++
Sbjct: 91 RLLSKYQNKIRKDSFLTVKKSGIISGDVTLRISLGSPWLPIILPNHKIRSETP 143
>gi|312138214|ref|YP_004005550.1| mce family lipoprotein mce2e [Rhodococcus equi 103S]
gi|311887553|emb|CBH46865.1| putative Mce family lipoprotein Mce2E [Rhodococcus equi 103S]
Length = 411
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 49/144 (34%), Gaps = 14/144 (9%)
Query: 1 MESKNYYTSVGLFV-VSILFFSFFSIYWLS-------RSNQYDGPMAEVIIRIPGSVDGL 52
M + + GL + W + EV I++P +V L
Sbjct: 1 MNTFSTARRAGLTASLLAATLVLSGCEWSGLNSVPLPGTQGRGDGAYEVEIQMP-NVTTL 59
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
+ +S VR + VG + + + H+L A + D L ++TA I L G ++
Sbjct: 60 TQNSPVRVGDVTVGSVSKIEVQG---WHALVTASLNGDVDLPANSTAKIGQTSLLGSAHL 116
Query: 113 E--LSTLRKEKKTIFQIATERNQR 134
E K + +R
Sbjct: 117 ELAPPAGEAPKGKLADGDVIPLER 140
>gi|296169054|ref|ZP_06850715.1| Mce family virulence factor [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896282|gb|EFG75942.1| Mce family virulence factor [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 140
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGI 63
+ +VG+ V+ + F+ + + A+ + + S GL S V +NG+
Sbjct: 18 RWIAVGVLVILAIVFTMVYVQFRGGI------TAKTNLTMLASRAGLVMDPGSKVTYNGV 71
Query: 64 PVGRIVGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
+GR+ + ++ + + P + + A IR ++G Y
Sbjct: 72 EIGRVGDISETVRDGKPAAKFTLEVYPRYLSLIPSNVNADIRATTVSGGKY 122
>gi|294139195|ref|YP_003555173.1| mce-related protein [Shewanella violacea DSS12]
gi|293325664|dbj|BAJ00395.1| mce-related protein [Shewanella violacea DSS12]
Length = 154
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 53/138 (38%), Gaps = 4/138 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSN-QYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M ++ VG+F++S L ++ ++ + + + ++ GL S V+
Sbjct: 1 MLTRKIEVLVGVFLLSGLAAFLILVFNVANVEVRSGANNYTLYAKFS-NIGGLKVRSPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + LD K + +++ +I T GL G ++ L+
Sbjct: 60 VGGVVVGRVSAITLDPTELVPV-VKLSMDKHFDQFPETSSLSILTSGLLGEQFLGLTPGF 118
Query: 119 KEKKTIFQIATERNQRAM 136
+ + +R
Sbjct: 119 MDDDISMLVDGDRVHDTH 136
>gi|289642560|ref|ZP_06474703.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
gi|289507648|gb|EFD28604.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
Length = 419
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 4/103 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLY 94
G ++ L ++V+ G+ VG + + L+ + + + PL+
Sbjct: 32 GDDRAIVTATFADASPLVAGNAVKAGGVEVGTVKSIDLEG---GLAKVRMALDRSVLPLH 88
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
ATI TQ L G +I L + + +
Sbjct: 89 TDVRATITTQDLLGERFIRLERGSPSAPVLSEPLMIPQTQTNR 131
>gi|145297398|ref|YP_001140239.1| toluene tolerance protein TTG2C [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142850170|gb|ABO88491.1| toluene tolerance protein TTG2C [Aeromonas salmonicida subsp.
salmonicida A449]
Length = 163
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/124 (19%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VG F+++ + ++ + +G + ++ GL S V+
Sbjct: 1 MKFSKVEFLVGAFMLAGIGAILALALQVAGLSFKPEGETYTLRAHF-DNIGGLKVRSPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + ++ + + ++T +I T GL G YI L
Sbjct: 60 VGGVVVGRVSDITLDAKSQVPVVSLLMQKSAGEFSETSTLSILTSGLLGEQYIGLMPGFS 119
Query: 120 EKKT 123
+++
Sbjct: 120 DEEM 123
>gi|219556434|ref|ZP_03535510.1| hypothetical protein MtubT1_03660 [Mycobacterium tuberculosis T17]
Length = 234
Score = 57.3 bits (135), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/132 (12%), Positives = 33/132 (25%), Gaps = 3/132 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
Y ++ L V+ G+ VG I + +
Sbjct: 39 RLYRKLTTTTVVAYFSEALALYPGDKVQIMGVRVGSIDKIEPAGD---KMRVTLHYSNKY 95
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + TA+I L I+LS + A +R + + I+
Sbjct: 96 QVPATATASILNPSLVASRTIQLSPPYTGGPVLQDGAVIPIERTQVPVEWDQLRDSINGI 155
Query: 152 ENTSKKISDSSR 163
+
Sbjct: 156 LRQLGPTERQPK 167
>gi|296167382|ref|ZP_06849784.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897326|gb|EFG76930.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 433
Score = 57.3 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 52/151 (34%), Gaps = 9/151 (5%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIP 64
Y G+ + + + P ++ + S GL S V +NG+
Sbjct: 15 YKLAGIAAL--ILALMAGALVYGQFRGDLTPKTKLTML--ASRAGLVMDPGSKVTYNGVE 70
Query: 65 VGRIVGL-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+GR+ + ++ + + P + + A I+ + G Y+ L+T +
Sbjct: 71 IGRVGDISETVRDGKPAAKFTLDVYPRYLSLIPSNVNADIKATTVFGGKYVSLTTPKNPS 130
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAE 152
T + R++ T + S AE
Sbjct: 131 PQKLNPHTVIDARSVTTEINTLFQTITSIAE 161
>gi|296139953|ref|YP_003647196.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
gi|296028087|gb|ADG78857.1| virulence factor Mce family protein [Tsukamurella paurometabola DSM
20162]
Length = 445
Score = 57.3 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 3/111 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M +GL + F + + + Q V + + L +S VR
Sbjct: 1 MMRTVRRRLLGLAFFG--VCALFLVATIGKYQQRFETFTWVELVTDTAGASLPVNSEVRA 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G+ VG + + + ++ + + TA I + L G Y
Sbjct: 59 RGVEVGTVRDVSV-RDGKAVIRMGLKPDEARQIPGAVTARILPKTLFGQRY 108
>gi|255620056|ref|XP_002540075.1| conserved hypothetical protein [Ricinus communis]
gi|223499446|gb|EEF22308.1| conserved hypothetical protein [Ricinus communis]
Length = 253
Score = 57.3 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 56/206 (27%), Gaps = 8/206 (3%)
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+I + ++ + D RE G + +
Sbjct: 55 PVEIKFYPERFTSRYADGKSGAGRAARDPREIADFLVSRGFRGQLKTGSLLTGQLYVSFD 114
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
F S R+ E + + S + I + K +
Sbjct: 115 FFPHAQKASVDWSRTPAELPTEPSGLQSLQESINRIVARIDKLPLEQIGKNTQQALADAG 174
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
N + A+ + + T N + + D + +R+L T
Sbjct: 175 TLMQSLNTQVVPQAKSTLSAAQATLNSANSALAP--------DSTLQQDTSDAIRELART 226
Query: 419 VNHFDDCLNNFERNPQDIVWGREKGS 444
F + +R+P+ ++ G+++ +
Sbjct: 227 AASFRALSDYLQRHPEALLRGKQEDA 252
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/72 (20%), Positives = 26/72 (36%), Gaps = 7/72 (9%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--FLDQEYPNHSLAKALIRPDTPLYPST 97
++ SV GL+ + V F GI +G + + D + I + YP
Sbjct: 10 TYVLNFKESVRGLTVGAPVDFRGIVLGEVSAIYTRFDP-----VTKQISIPVEIKFYPER 64
Query: 98 TATIRTQGLAGI 109
+ G +G
Sbjct: 65 FTSRYADGKSGA 76
>gi|188534236|ref|YP_001908033.1| paraquat-inducible protein B [Erwinia tasmaniensis Et1/99]
gi|188029278|emb|CAO97155.1| Paraquat-inducible protein B [Erwinia tasmaniensis Et1/99]
Length = 546
Score = 57.3 bits (135), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/398 (8%), Positives = 91/398 (22%), Gaps = 25/398 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L V F G VG + D + + + P T +R +GI
Sbjct: 171 LRAGDPVLFRGYRVGSVETSAFDADKR---MMTYQLFVSAPYDRLVTNNVRFWKDSGIAV 227
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
++ + + I + + AE S + +
Sbjct: 228 DMSASGMRVEMGSLTTLFSGGVSFDIPSGWDLGTPAENKAEYRLFNDQRSIQDSLYSVHK 287
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ + +D T I + + ++
Sbjct: 288 DFLLF----------FNDSIRGLQKGAPVEFRGIRLGTVADVPFTMPGIVQRLNNDYRIP 337
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
I ++ + + + ++ + +D +
Sbjct: 338 VLIRIEPDRFQSQLGKDFNFEEHLKDGVAAGLRASLKSANLLTGALYVDLDFYNNAKPVS 397
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + R + +N + ++ +
Sbjct: 398 GPATFANYSVIPTVSGGLAQIQQKLMESLDKINRLPLNPMLNEATGTLKESQRTLRELQK 457
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
+ +N +++ + L D Q + + + N +
Sbjct: 458 TLDNLNQLTSSQSMKELPADMQSTLRELNRSMKGFQP------------GSPAYNKMVGD 505
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+++L + + L +V+ + G K
Sbjct: 506 MQRLDQVLRELQPVLKTLNTKSNALVFEAKPGQDPQPK 543
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 18/57 (31%), Gaps = 7/57 (12%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD-------QEYPNHSLAKALIRPD 90
++ S+ GL + V F GI +G + + I PD
Sbjct: 289 FLLFFNDSIRGLQKGAPVEFRGIRLGTVADVPFTMPGIVQRLNNDYRIPVLIRIEPD 345
>gi|283785572|ref|YP_003365437.1| hypothetical protein ROD_18741 [Citrobacter rodentium ICC168]
gi|282949026|emb|CBG88629.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
Length = 877
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 49/132 (37%), Gaps = 12/132 (9%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + I+ N Y+ V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLIW-----NSYEDRGNTVTIDF-QSADGIVPGRTPVRYQGVEVGTVQDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIAT 129
++ + I+ D L T + T LAG++ ++ +
Sbjct: 82 SKD-LRKIEVRVSIKSDMKDALRAETQFWLVTPKASLAGVSGLDALVGGNYIGMMPGKGE 140
Query: 130 ERNQRAMITATP 141
E++ + P
Sbjct: 141 EQDHFVALDTQP 152
Score = 43.8 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 13/114 (11%), Positives = 27/114 (23%), Gaps = 1/114 (0%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA-KALIRPDTPLYPSTTATIRTQGLA 107
L+ + V F GI VG + G+ L +A + R + ++ + +
Sbjct: 757 AGSLAIGTPVLFRGIEVGTVTGMTLGSLSDRVMIALRISQRYQHLVRNNSMFWLASGYSL 816
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 817 DFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|183984674|ref|YP_001852965.1| MCE family lipoprotein [Mycobacterium marinum M]
gi|183178000|gb|ACC43110.1| MCE-family lipoprotein [Mycobacterium marinum M]
Length = 410
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/305 (11%), Positives = 87/305 (28%), Gaps = 11/305 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQY-------DGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
LFV+ + + N GP A V +V L +S V N +
Sbjct: 13 LFVIGCCVMLAVTGCAFNGLNSLPLPGAVGRGPGASVYHVEIANVGTLEANSPVMLNDVI 72
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG I + + H+ + +R + + A++ L G ++ L++ +
Sbjct: 73 VGSISKMTV---RGWHADVEISVRRGAVIPDNAVASVGQTSLLGSMHLALNSPLGQVSDQ 129
Query: 125 FQIATERNQRAMITATPS-GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + PS + + + I + + +
Sbjct: 130 RLQPGSTIPLSRSSTYPSTEQTLSSLSVILNAGGLGQIGDIIHNFTAALSGRTSDIRDLL 189
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ + D ++ + Q + + + + +++ +I
Sbjct: 190 VRLDRFVGTFDEQRDNLVASIQALNRLAGTLAGQRDVITQALQKIPPALDVLIRERPRIT 249
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ ++ V + D+ + Q + + D + + T F +
Sbjct: 250 AALDKLGTFSDTATRLVNDAGSDLVQNLQNLGPTISALADIGPDLDAAIAYAPTFPFTQG 309
Query: 304 IADST 308
D
Sbjct: 310 FIDRY 314
>gi|296165588|ref|ZP_06848113.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899061|gb|EFG78542.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 320
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 33/92 (35%), Gaps = 3/92 (3%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
+ +VR GI VG++ L ++ +A + D + + +R
Sbjct: 41 YTDDAAAIHPGDTVRIAGITVGKVKDLSIEPN---QVKVRATVDHDAFVGDQSQIQVRML 97
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
+ G Y+ L +L ++ I ER
Sbjct: 98 TVVGGYYVNLVSLGRKPLGANPIPVERVTMPY 129
>gi|118464153|ref|YP_883274.1| virulence factor Mce [Mycobacterium avium 104]
gi|118165440|gb|ABK66337.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 438
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 42/311 (13%), Positives = 101/311 (32%), Gaps = 13/311 (4%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVG 70
F+ ++ F++ ++ + P E+ + S GL S V +NG+ +GR+
Sbjct: 24 FITVVVLAVIFTLVYI-QFRGGFTPKTELTML--ASRAGLVMDPGSKVTYNGVEIGRVGT 80
Query: 71 L-FLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ ++ + + P + + A I+ + G Y+ L+T
Sbjct: 81 ISETVRDGKPAAKFTLEVYPRYLKLIPSNVNADIKATTVFGGKYVSLTTPAHPSPQKISS 140
Query: 128 ATERNQRAMITATPSGINYFISNAENT-----SKKISDSSRHIQKIIENIEKPLTTTIAN 182
T + R++ T + S AE + +S +++ + + E + + A
Sbjct: 141 HTVIDARSVTTEINTLFQTITSIAEKVDPVKLNLTLSAAAQSLSGLGEKFGQSVVNANAL 200
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
++ ++ + I + +S F + + + Q +
Sbjct: 201 LDDVNPRMPQARKDIQGLAALGDTYADASPDLFDFLNNAVITSRTINAQQKDLDQALLSA 260
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ F K + D+ T Q +I L+ + + + +
Sbjct: 261 AGFGNTGAELFTKGGPYLARGAQDLIPTAQLLDTYSPEIYCLMRNEHDALPATGAAEGGF 320
Query: 303 NIADSTSNMRS 313
N N +
Sbjct: 321 NGYSLNMNTEA 331
>gi|317492131|ref|ZP_07950561.1| hypothetical protein HMPREF0864_01325 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316919836|gb|EFV41165.1| hypothetical protein HMPREF0864_01325 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 876
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 33/93 (35%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + IY + VII S GL + VR+ G+ VG + + L
Sbjct: 28 FIALLIAGWLIY-----STLQERGDTVIIDF-QSAAGLVAGRTPVRYQGVEVGTVQKIAL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ N I+ D L T + T
Sbjct: 82 SED-LNKIEVSVSIKSDMKDALRDGTQFWLVTP 113
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 12/111 (10%), Positives = 25/111 (22%), Gaps = 3/111 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L + V F GI VG + GL+L + I + ++ + +
Sbjct: 758 LQIGTPVLFRGIEVGTVTGLYL-GSMSDRVHVALRISKKYQRLVRENSVFWLASGYNVEF 816
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + P + +
Sbjct: 817 GLTGGMVKTGTFQQFIRGGIAFATPPTTPLAPQAQPNTHYLLNDNAPDKWQ 867
Score = 38.0 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
LS +R+ GI +G++ L L N LAKA++ P Y + A T+
Sbjct: 641 DASKLSAGMPIRYLGIDIGQVESLKLS-NERNEVLAKAVL---YPEYVDSFARQGTRF 694
>gi|238783417|ref|ZP_04627440.1| hypothetical protein yberc0001_19680 [Yersinia bercovieri ATCC
43970]
gi|238715662|gb|EEQ07651.1| hypothetical protein yberc0001_19680 [Yersinia bercovieri ATCC
43970]
Length = 852
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y N + EV I S G+ + +R+ G+ VG + + L
Sbjct: 4 FIALLIAGWLVY-----NNWQERGTEVTIDF-QSAAGIVAGRTPIRYQGVEVGMVQSISL 57
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
D + + A I+ D L T + T
Sbjct: 58 D-DDLRNIKVTASIKNDMEDSLREGTQFWLVTP 89
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
L + V F G+ VG + G L I + ++ + +
Sbjct: 731 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQQLVRQNSVFWLAS 786
Score = 40.7 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 25/93 (26%), Gaps = 1/93 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
+ L+ S V + IPVG++ + + + R + T +
Sbjct: 145 DLGSLNNGSLVYYRKIPVGKVYDYNIAPDNNGVVIDVLIDRRFAKLVKNDTRFWNVSGFK 204
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
+ S + + A +
Sbjct: 205 GDFSLSGASVQMESLAALVNGAIAFDSPPNSQH 237
Score = 40.3 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +R+ GI +G++ L L E
Sbjct: 617 DASKLAPGMPIRYLGINIGQVESLKLIPERNEV 649
>gi|115442541|ref|NP_001045550.1| Os01g0974000 [Oryza sativa Japonica Group]
gi|57899704|dbj|BAD87424.1| ABC-type transport system-like [Oryza sativa Japonica Group]
gi|57899922|dbj|BAD87834.1| ABC-type transport system-like [Oryza sativa Japonica Group]
gi|113535081|dbj|BAF07464.1| Os01g0974000 [Oryza sativa Japonica Group]
gi|215694304|dbj|BAG89297.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737474|dbj|BAG96604.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768238|dbj|BAH00467.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222619966|gb|EEE56098.1| hypothetical protein OsJ_04947 [Oryza sativa Japonica Group]
Length = 370
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 8/145 (5%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS ++ WL + G+ + VR G+ VG +V
Sbjct: 88 VGLFMVSGAALLALALAWLRGFQLRARFRKYQAVFEFTQACGICVGTPVRIRGVTVGNVV 147
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ A + D + ++ + GL T I+++ + +
Sbjct: 148 RVD---SSLKSIDAYVEVEDDKIIVPRNSVVEVNQSGLLMETLIDITPKDP----LPTPS 200
Query: 129 TERNQRAMITATPSGINYFISNAEN 153
+ +
Sbjct: 201 VGPLDPDCSKEGLILCDKERMKGQQ 225
>gi|56460164|ref|YP_155445.1| paraquat-inducible protein B, secreted [Idiomarina loihiensis L2TR]
gi|56179174|gb|AAV81896.1| Paraquat-inducible protein B, secreted [Idiomarina loihiensis L2TR]
Length = 546
Score = 56.9 bits (134), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/399 (6%), Positives = 90/399 (22%), Gaps = 25/399 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
++ SV++ G VG++ + D + +T ++
Sbjct: 169 VTVGDSVQYQGFTVGQVEQSEFQVDERQTRYQIFVKAPYDELITENTRFWLQRGVSIQWN 228
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
L +++ + + + ++
Sbjct: 229 SQGLDLALGSIESLLGASVTFGVPEGQPRGDKLTSEQEFELFESLEEAKQQGYIHGIDYV 288
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + + + + + K I
Sbjct: 289 VLLDESIAGLEKGAPVQFKGVRVGTVREVPLRWFPENGDEAPLKRIPILIRFEPER---- 344
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + +EN + K ++R + + + +
Sbjct: 345 ---LRGLVADTDIENWERRLPELFK-----QGLRANIRASNLLTNTLFVDVRFYPNAGEK 396
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ S + + +N S+++ +++K
Sbjct: 397 SGDDIFAGYPVMPAMASDFTRLEEKLTALLDKFNQLPLEQGLNDFSAAMSSVDSTARKLD 456
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ + I + L + Q+ + ++ + N +
Sbjct: 457 SVSESLAAIVEQPQMKQLPQLLQQNLIQLKELTGSFNE------------GSPTRQQLNQ 504
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ ++++ + + P +++ K
Sbjct: 505 TLTEIEQLSRELKPVIELLQEQPNSLIFSPSIEPDPEPK 543
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 18/33 (54%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++ + S+ GL + V+F G+ VG + + L
Sbjct: 287 YVVLLDESIAGLEKGAPVQFKGVRVGTVREVPL 319
>gi|269124779|ref|YP_003298149.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268309737|gb|ACY96111.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 340
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 34/110 (30%), Gaps = 4/110 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ V L+T SV+ + + VG + + L +L + +
Sbjct: 31 KGGMTLSATF-EDVQTLTTGHSVQISDVKVGTVTKIELSG---YRALVTMSLEKGRRIPT 86
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
TTATI L G Y+ L + + + + P
Sbjct: 87 GTTATISRTSLLGENYVRLDPPPGRDLSTGPFLPDGAHLSATSVQPDLEQ 136
>gi|125529305|gb|EAY77419.1| hypothetical protein OsI_05413 [Oryza sativa Indica Group]
Length = 370
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 8/145 (5%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS ++ WL + G+ + VR G+ VG +V
Sbjct: 88 VGLFMVSGAALLALALAWLRGFQLRARFRKYQAVFEFTQACGICVGTPVRIRGVTVGNVV 147
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ A + D + ++ + GL T I+++ + +
Sbjct: 148 RVD---SSLKSIDAYVEVEDDKIIVPRNSVVEVNQSGLLMETLIDITPKDP----LPTPS 200
Query: 129 TERNQRAMITATPSGINYFISNAEN 153
+ +
Sbjct: 201 VGPLDPDCSKEGLILCDKERMKGQQ 225
>gi|116073194|ref|ZP_01470456.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein [Synechococcus sp. RS9916]
gi|116068499|gb|EAU74251.1| ABC-type organic solvent transporter, solute-binding periplasmic
protein [Synechococcus sp. RS9916]
Length = 277
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+++ ++ +V I+ V+G++ +R G+PVG++ L L+++ H +
Sbjct: 34 FAKAQRWGTSFVDVYIK-ARDVNGITRGEDIRIAGLPVGQVGDLRLNKKGKVHVQLRIET 92
Query: 88 RPDTPLYPSTTATIRTQGLAGITY 111
+ P + A + +GL G +
Sbjct: 93 DKAYLIGPRSKAHLAQEGLMGDPF 116
>gi|16331343|ref|NP_442071.1| hypothetical protein sll0751 [Synechocystis sp. PCC 6803]
gi|1001514|dbj|BAA10141.1| ycf22 [Synechocystis sp. PCC 6803]
Length = 169
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 6/89 (6%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
FS WL ++ + G+ + V + G+ VG++V + E
Sbjct: 31 FSTLWLKNI-RFGSRSYRATVLFSD-AAGMLVGTRVDYRGVRVGQVVSVTPQPEG---VA 85
Query: 83 AKALIRP-DTPLYPSTTATIRTQGLAGIT 110
+ I P D + R GL G T
Sbjct: 86 VEVEISPTDRLISSRAEIQARQSGLIGET 114
>gi|169628788|ref|YP_001702437.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169240755|emb|CAM61783.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 369
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 4/100 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
D V + S GL + V G+PVG++ + ++ + + +
Sbjct: 30 DRGTITVTAQF-DSAAGLYPGNVVAVLGMPVGQVSKIT---ARGGYAEVEFTVDSQVKVP 85
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A + + IELS + + T R
Sbjct: 86 ADAQAVTLSTSILTDRQIELSPPYRGGPELRDGDTIGLSR 125
>gi|312881883|ref|ZP_07741650.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309370462|gb|EFP97947.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 166
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 2/130 (1%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+++ VG FV++ + I+ ++ + ++ GL S V+
Sbjct: 4 KNRKIELWVGSFVLAGICAILVMIFQVADVKNLGSSDTYTLKAEFDNIGGLKVRSPVKVG 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VGR+ + L+ + I +++ I T GL G Y+ L+
Sbjct: 64 GVVVGRVTNIGLNSDSMVPV-VTVAINATYDKFPDTSSLKILTSGLIGEQYLSLTPGFIF 122
Query: 121 KKTIFQIATE 130
+
Sbjct: 123 DDEKMLQDGD 132
>gi|126433447|ref|YP_001069138.1| hypothetical protein Mjls_0838 [Mycobacterium sp. JLS]
gi|126233247|gb|ABN96647.1| Mammalian cell entry related domain protein [Mycobacterium sp. JLS]
Length = 364
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 14/108 (12%), Positives = 29/108 (26%), Gaps = 4/108 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
A+ +P S+ GL + V G +G + + +
Sbjct: 36 RSNAQYCAVLPDSI-GLYVGNPVTQMGYQIGEVTSITP---GTTDVRVDFSVTERRLFPS 91
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
A +R+ + +EL + R+ + S
Sbjct: 92 DVKAIVRSTSILADRSLELVGNADSGSHLGAGECIPLSRSWTPKSVSA 139
>gi|78186328|ref|YP_374371.1| VpsC protein [Chlorobium luteolum DSM 273]
gi|78166230|gb|ABB23328.1| VpsC protein [Chlorobium luteolum DSM 273]
Length = 292
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN- 79
+ + + +++ + V + + G++ GL+ ++ V +G VG + + + +
Sbjct: 25 AAYLGLVIGKNSSLFTGVTTVKV-LAGNMQGLTENNFVSVSGKKVGTVSKMEFTSQNDSL 83
Query: 80 HSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
+A IR + + + ATIR+ G+ G Y+++ T +
Sbjct: 84 LVVADLRIRNEYANLVTKDSKATIRSLGVLGDKYVDIMTGKG 125
>gi|205352488|ref|YP_002226289.1| hypothetical protein SG1267 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205272269|emb|CAR37146.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
Length = 879
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ DT L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDTEDALREETQFWLVTP 115
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 872
>gi|84501183|ref|ZP_00999388.1| hypothetical protein OB2597_12498 [Oceanicola batsensis HTCC2597]
gi|84390474|gb|EAQ02962.1| hypothetical protein OB2597_12498 [Oceanicola batsensis HTCC2597]
Length = 102
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 41/102 (40%), Gaps = 9/102 (8%)
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL-- 405
+ +++++ + N+ F A+ A T RD ++++ + + + +
Sbjct: 1 ELTAVLTELREGGVVANLNATFDSARDAADTLRDVAQQLPALLDRARSTIAQAGTTIQGY 60
Query: 406 -------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
D+ +R+++ + ERNP +++GR
Sbjct: 61 DAERGIGRDLATALREVERAAAAVNSLARALERNPNSLLFGR 102
>gi|86147571|ref|ZP_01065881.1| putative ABC superfamily transport protein [Vibrio sp. MED222]
gi|85834610|gb|EAQ52758.1| putative ABC superfamily transport protein [Vibrio sp. MED222]
Length = 163
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 44/117 (37%), Gaps = 2/117 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKLELWVGTFVIAGICAILIMIFQVADVKGIGSNHTYNLKATFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ VGR+ + LD E + I +++A I T GL G YI L
Sbjct: 64 VVVGRVQSIELDTESYLPV-VELSIDAKYSQFPDTSSAQILTSGLIGEQYISLVPGF 119
>gi|254819938|ref|ZP_05224939.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 489
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 38/122 (31%), Gaps = 5/122 (4%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
IL + + L+ + + + GL + V+ G+ VGR+ +
Sbjct: 17 LILLGTITGLVVLTVAAFNRDLRPYARVTLTADRSGLIMEPGAKVKLRGVQVGRVTSIH- 75
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERN 132
P + + + +A I G Y++ + + A R+
Sbjct: 76 -SGDPVTLRLELYPEQLQYIPANVSAQITATTAFGGKYVDLQIPESPSPRRLAAGAVVRS 134
Query: 133 QR 134
+
Sbjct: 135 RN 136
>gi|326382978|ref|ZP_08204667.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198114|gb|EGD55299.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 444
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 34/103 (33%), Gaps = 4/103 (3%)
Query: 11 GLFVVSILFFSFFSI--YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
GL V + I L I ++ L S V+ +GIPVG++
Sbjct: 17 GLVTVLAVTTGCAGIQSVPLPGGVDVGDNPRTYKIVF-NNILDLVPQSMVKMDGIPVGQV 75
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + + ++ L +A ++ L G +
Sbjct: 76 TKVEV-PTGAWDAQVTIKVKNSVDLSDEASAAVQQTNLLGEKF 117
>gi|324999491|ref|ZP_08120603.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 439
Score = 56.9 bits (134), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/137 (13%), Positives = 48/137 (35%), Gaps = 7/137 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVR 59
+ ++ G+ ++ L +Y P + + G + +++V+
Sbjct: 4 KPRSKLALAGIL-LAGLAVLAVVMYLKPALQTMLTPGTTIRAEFADNYRGKIFANENTVK 62
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTL 117
G+ +G++ G+ + ++ + D + P TA + + + G Y T
Sbjct: 63 LAGLTIGKVSGVE--ETDSGTAVVSMKVDDDVLDKIGPEPTALLSPRTVLGSVYSIELTP 120
Query: 118 RKEKKTIFQIATERNQR 134
+ AT +R
Sbjct: 121 GGGAGRFDEEATIPVER 137
>gi|311744828|ref|ZP_07718624.1| MCE family protein [Aeromicrobium marinum DSM 15272]
gi|311311945|gb|EFQ81866.1| MCE family protein [Aeromicrobium marinum DSM 15272]
Length = 463
Score = 56.9 bits (134), Expect = 8e-06, Method: Composition-based stats.
Identities = 35/343 (10%), Positives = 101/343 (29%), Gaps = 16/343 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L E+ I V L S+VR N + VGR+ + L + L+
Sbjct: 32 LPGGADVGDDPIELTIEF-RDVLDLVPQSAVRVNDLAVGRVTDIEL---KGWTAEVTVLV 87
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
D L + ATIR L G ++ L+ +
Sbjct: 88 NGDVELPDNAEATIRQSSLLGEKFVSLAAPVTGGTGALESGDSIPLERAGRNPEIEEVLG 147
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
++ + ++ ++++ ++ ++T + + ++ D ++ + +
Sbjct: 148 AASLLLNGGGLEKTNTIVRELSAALDGNEPEIKQLLQTTTEFIGQLDANKDVILTSLEKV 207
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + N + + ++ ++ + ++D + + D
Sbjct: 208 NNLALTANDQRGAIEGALDELPEALQVLDEQRAGLVRLTTSLAALGDTATDVIRTSRDDT 267
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
++ + + + + D + + + T F + + + + Q
Sbjct: 268 VANLRSLEPILRNLALAGDDLVNTLSTVATFPFPNAAVGGSLASAQAQCSNDQPLGQTPS 327
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
D + A + ++ + + L
Sbjct: 328 ACGG------------DYTNLVANIDLSVDQLFNVLGLQGLAA 358
>gi|119717044|ref|YP_924009.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119537705|gb|ABL82322.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 436
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/346 (10%), Positives = 104/346 (30%), Gaps = 21/346 (6%)
Query: 38 MAEVIIRIPG--SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
EV +V S V + + VG + + H+ IR D L
Sbjct: 41 SYEVTAEFADILNV---VPRSPVMVDDVTVGEVTDVE---RVGWHARITLRIRDDVKLPD 94
Query: 96 STTATIRTQGLAGITYI--ELSTLRKEKKTIFQIATER--NQRAMITATPSGINYFISNA 151
+ A IR L G Y+ E + T+ + +
Sbjct: 95 NAVADIRQVSLLGEKYVALEAPAGTAAEGTLSDGDNIPLADTGRNPEVEEVLGALSFLLS 154
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
++ + + ++++ + L + ++E++ L + + I M + +
Sbjct: 155 GGGVSQLGTITHELNQVMDGRTERLRHLLGSLESVVAALDDQKADIVTAMESLDHLTSTL 214
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+++ + + + ++++ ++ + + + D+ +
Sbjct: 215 NAEKKTV---TDALDVAGPAVEVLAAQHDELIAMLRSLDRLGAVGTRVIGQSKADILASL 271
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD------STSNMRSSISAIREITDQR 325
Q + Q++ D + + + F + ++ + +++R+ IS + Q
Sbjct: 272 DHLQPILQRLHDAGDDLAPGLNLLVSFPFPKEASEIVKGDYANTSIRADISLENLLPGQS 331
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
I I + S + + + +
Sbjct: 332 GGGIPGIPDPSQLLSTVEKCLRSGDLTSRSCQQVLDSANLLKKLVE 377
>gi|254822926|ref|ZP_05227927.1| Mce1_2 [Mycobacterium intracellulare ATCC 13950]
Length = 101
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 7/88 (7%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIP 64
Y GL + I +Y + P + + S GL S V +NG+
Sbjct: 15 YKWAGLAALVIAALVLGFVY--GQFRGDFTPKTNLTML--ASRAGLVMDPGSKVTYNGVE 70
Query: 65 VGRIVGL-FLDQEYPNHSLAKALIRPDT 91
+GR+ + ++ + + P
Sbjct: 71 IGRVGSIAETVRDGKPAAKFTLEVYPRY 98
>gi|169631109|ref|YP_001704758.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243076|emb|CAM64104.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 364
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 31/105 (29%), Gaps = 1/105 (0%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
V V+++ + + S Y P E+ + +G+ V++ G +
Sbjct: 15 TALKVRGLVLALAVAAGGYSLYQSGIGSYGEP-FELTLITNTIGEGMGPGGEVKYRGYNI 73
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G + L R L T A + + G
Sbjct: 74 GHVKSLQTTGYNKQRMTVILDGRQAKALTSDTKAQFTSSNIFGTA 118
>gi|21220882|ref|NP_626661.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|256787963|ref|ZP_05526394.1| secreted protein [Streptomyces lividans TK24]
gi|289771850|ref|ZP_06531228.1| secreted protein [Streptomyces lividans TK24]
gi|10798659|emb|CAC12795.1| putative secreted protein [Streptomyces coelicolor A3(2)]
gi|289702049|gb|EFD69478.1| secreted protein [Streptomyces lividans TK24]
Length = 337
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 14/119 (11%), Positives = 34/119 (28%), Gaps = 4/119 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V ++ G+ S +R G+ VG + + + + +
Sbjct: 31 GGTRVTAYFDRAI-GVYAGSDLRILGVRVGEVESVDPEG---TRVRVGLRLDDGIKVPED 86
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
A + + Y++L+ + + A R + I I+ +
Sbjct: 87 ARAVVVAPSVVADRYVQLTPAYRTGPALADGAVLPASRNHVPVEIDQIYDSITELGDAL 145
>gi|168259906|ref|ZP_02681879.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|200389694|ref|ZP_03216305.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|199602139|gb|EDZ00685.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205351071|gb|EDZ37702.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|261247031|emb|CBG24848.1| putative membrane protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
Length = 877
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|312141004|ref|YP_004008340.1| mce family lipoprotein mce4e [Rhodococcus equi 103S]
gi|325675359|ref|ZP_08155043.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|311890343|emb|CBH49661.1| putative Mce family lipoprotein Mce4E [Rhodococcus equi 103S]
gi|325553330|gb|EGD23008.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 415
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 2/84 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L V I V L S+V+ +G+PVGR+ + + + + + L+
Sbjct: 34 LPGGADIGSDPMHVKIEF-DDVLDLVPQSTVKVDGVPVGRVENISVA-DDGWTAQVETLV 91
Query: 88 RPDTPLYPSTTATIRTQGLAGITY 111
L + A ++ L G +
Sbjct: 92 NSSVDLPANAVAEVQQSNLLGEKF 115
>gi|197249500|ref|YP_002146176.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197213203|gb|ACH50600.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
Length = 877
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|197301065|ref|ZP_02663514.2| mce-related protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|197288632|gb|EDY28007.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 877
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|41407949|ref|NP_960785.1| hypothetical protein MAP1851 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396303|gb|AAS04168.1| hypothetical protein MAP_1851 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 530
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+G+ V+ + ++ + + + D V+ + DGL S V+++G+ VG +
Sbjct: 20 IGIAVLVV-SALLTTVMLVKSTGRLD-DYVRVVADLVNVGDGLPQKSDVKYHGVLVGMVD 77
Query: 70 GLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ PN+ + S TA + + ++ ++L K
Sbjct: 78 DVVPAAHGKPNYVHINLKEDYAKSIPASVTARVVPSNVFAVSSVQLVGNGPGTKIRDGAH 137
Query: 129 TERNQR 134
++R
Sbjct: 138 IPEDKR 143
>gi|322616845|gb|EFY13753.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322618084|gb|EFY14976.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322640783|gb|EFY37433.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322655401|gb|EFY51709.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322668044|gb|EFY64203.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322674194|gb|EFY70288.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322675451|gb|EFY71525.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322686828|gb|EFY82806.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323195280|gb|EFZ80460.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323199173|gb|EFZ84268.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203807|gb|EFZ88826.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323207429|gb|EFZ92377.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323217412|gb|EGA02131.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323224661|gb|EGA08934.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323245337|gb|EGA29337.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323266810|gb|EGA50296.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323269016|gb|EGA52472.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 877
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|121607548|ref|YP_995355.1| hypothetical protein Veis_0553 [Verminephrobacter eiseniae EF01-2]
gi|121552188|gb|ABM56337.1| Mammalian cell entry related domain protein [Verminephrobacter
eiseniae EF01-2]
Length = 341
Score = 56.5 bits (133), Expect = 8e-06, Method: Composition-based stats.
Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 2/111 (1%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
S +L + P VI+ S +G+ + F+G P+GR+ + L
Sbjct: 38 IVGSGLYLLYARGVFEPTQTVILTADDS-EGVVVGMDMTFSGFPIGRVRRIELASAGHAR 96
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L + L S+ T+ +GL G I + + A
Sbjct: 97 ILVDVPRKDAHWLRTSSVFTLV-RGLVGGANIRAYSGILSDPPLPDGAERP 146
>gi|168462651|ref|ZP_02696582.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194447731|ref|YP_002045894.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197264484|ref|ZP_03164558.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205357367|ref|ZP_03223726.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205359021|ref|ZP_02666381.2| mce-related protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|213424194|ref|ZP_03357059.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213648232|ref|ZP_03378285.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|289826538|ref|ZP_06545618.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|194406035|gb|ACF66254.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195633973|gb|EDX52325.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197242739|gb|EDY25359.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205322127|gb|EDZ09966.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205339645|gb|EDZ26409.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
Length = 877
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|194735284|ref|YP_002114881.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194710786|gb|ACF90007.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
Length = 879
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 115
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 872
>gi|168234497|ref|ZP_02659555.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|205331590|gb|EDZ18354.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 877
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|16765190|ref|NP_460805.1| inner membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167993802|ref|ZP_02574895.1| mce-related protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|16420382|gb|AAL20764.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|205328230|gb|EDZ14994.1| mce-related protein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|267993814|gb|ACY88699.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301158373|emb|CBW17872.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312912839|dbj|BAJ36813.1| Mce family protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321224483|gb|EFX49546.1| Paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|323130125|gb|ADX17555.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 4/74]
Length = 879
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 115
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 872
>gi|322625755|gb|EFY22574.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322626205|gb|EFY23015.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322633811|gb|EFY30551.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322638965|gb|EFY35658.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322644170|gb|EFY40715.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322660843|gb|EFY57074.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322662860|gb|EFY59067.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322683134|gb|EFY79150.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|323212368|gb|EFZ97190.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323220549|gb|EGA05000.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323231435|gb|EGA15548.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235875|gb|EGA19954.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240444|gb|EGA24487.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323246704|gb|EGA30676.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323253559|gb|EGA37387.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323261754|gb|EGA45325.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
Length = 879
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 115
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 872
>gi|198243769|ref|YP_002215292.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|197938285|gb|ACH75618.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|326623037|gb|EGE29382.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 877
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|153829812|ref|ZP_01982479.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148874730|gb|EDL72865.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 163
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSGKTYRLTAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ + L+ + I +++ I T GL G Y+ L +
Sbjct: 64 VVVGRVESIALNPKNL-LPTVTLAIDSQFNQFPENSSLQILTSGLIGEQYLSLVPGFVFE 122
Query: 122 KTIFQIATER 131
+R
Sbjct: 123 DEAMLKEGDR 132
>gi|56413233|ref|YP_150308.1| hypothetical protein SPA1024 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194470324|ref|ZP_03076308.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197362158|ref|YP_002141795.1| hypothetical protein SSPA0955 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|207856645|ref|YP_002243296.1| hypothetical protein SEN1188 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|238912086|ref|ZP_04655923.1| hypothetical protein SentesTe_13271 [Salmonella enterica subsp.
enterica serovar Tennessee str. CDC07-0191]
gi|56127490|gb|AAV76996.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|194456688|gb|EDX45527.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|197093635|emb|CAR59105.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|206708448|emb|CAR32769.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|326627546|gb|EGE33889.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 879
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 115
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 872
>gi|29141505|ref|NP_804847.1| hypothetical protein t1029 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194445397|ref|YP_002041103.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|213615625|ref|ZP_03371451.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|29137132|gb|AAO68696.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|194404060|gb|ACF64282.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
Length = 879
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 115
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 872
>gi|16760737|ref|NP_456354.1| hypothetical protein STY1980 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|25302998|pir||AI0728 conserved hypothetical protein STY1980 [imported] - Salmonella
enterica subsp. enterica serovar Typhi (strain CT18)
gi|16503034|emb|CAD05531.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
serovar Typhi]
Length = 879
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDMEDTLREETQFWLVTP 115
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 818 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 872
>gi|254773613|ref|ZP_05215129.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 400
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 42/121 (34%), Gaps = 10/121 (8%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFN 61
+ + V++ L +F + +LS P+ V + P GL + V++
Sbjct: 7 RRTTVRLAAAVLAGLMVAFAVLTYLS-YTVAFAPIDTVTVSAPR--AGLVMEQGAKVKYR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI +G++ + + + I + + T I + G +E +
Sbjct: 64 GIQIGKVEAIEYSGD---QARLTLGINSKDMHFIPSNATVHIAGNTIFGAKAVEFIPPQT 120
Query: 120 E 120
Sbjct: 121 P 121
>gi|62180415|ref|YP_216832.1| hypothetical protein SC1845 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|62128048|gb|AAX65751.1| putative inner membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|322714888|gb|EFZ06459.1| Uncharacterized protein yebT [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 891
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 42 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 95
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 96 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 127
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 771 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 829
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 830 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 884
>gi|157373874|ref|YP_001472474.1| virulence factor MCE-like protein [Shewanella sediminis HAW-EB3]
gi|157316248|gb|ABV35346.1| mammalian cell entry related domain protein [Shewanella sediminis
HAW-EB3]
Length = 156
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 24/137 (17%), Positives = 55/137 (40%), Gaps = 2/137 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VGLF++S ++ ++ G + + ++ GL S V+
Sbjct: 1 MLTRKIEVLVGLFLLSGFAAFLVLVFNVANIEVKTGDSSYTLYAKFSNIGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + + +++ +I T GL G ++ L+ +
Sbjct: 61 GGVVVGRVSAIKLDSSELVPI-VELSMDKEFNQFPETSSLSILTSGLLGEQFLGLTPGFE 119
Query: 120 EKKTIFQIATERNQRAM 136
++ + +R
Sbjct: 120 DEDIAMLVDGDRIDDTH 136
>gi|54022508|ref|YP_116750.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014016|dbj|BAD55386.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 408
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 32/276 (11%), Positives = 83/276 (30%), Gaps = 5/276 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ + ++ I++P +V L+ +S VR + + VG + + + H+L +
Sbjct: 34 MPGAEGTGEGAYQIRIQMP-NVTTLTANSPVRVDDVDVGSVTDIEVQ---DWHALVTVSL 89
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY- 146
D L + A I L G ++ELS + A P+
Sbjct: 90 NRDVRLPANAIAKIGQTSLLGSNHVELSPPTDVVPEGQLRPGDVIPLDRAGAYPTTEEVL 149
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ I+ +++ + + ++ + N ++ +
Sbjct: 150 SSLSVVLNGGGIAQLETITKELNAALTGREDAIRDLLPQLNELTTNLRDQTGDIIAAMEG 209
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
T+ + + + I I + + + +
Sbjct: 210 LDRFGGQLAQQRTVLETALDGIHPALTVLADRRENITRAITALGELSDVTQRVIDTSGEN 269
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ + V Q++ ++ + +K T F
Sbjct: 270 LKANLASLGPVLQQLADTGNNLTESLKILLTFPFPM 305
>gi|118466346|ref|YP_881588.1| mce related protein [Mycobacterium avium 104]
gi|254775057|ref|ZP_05216573.1| mce related protein [Mycobacterium avium subsp. avium ATCC 25291]
gi|118167633|gb|ABK68530.1| mce related protein [Mycobacterium avium 104]
Length = 530
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 47/126 (37%), Gaps = 3/126 (2%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+G+ V+ + ++ + + + D V+ + DGL S V+++G+ VG +
Sbjct: 20 IGIAVLVV-SALLTTVMLVKSTGRLD-DYVRVVADLVNVGDGLPQKSDVKYHGVLVGMVD 77
Query: 70 GLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ PN+ + S TA + + ++ ++L K
Sbjct: 78 DVVPAAHGKPNYVHINLKEDYAKSIPASVTARVVPSNVFAVSSVQLVGNGPGSKIRDGAH 137
Query: 129 TERNQR 134
++R
Sbjct: 138 IPEDKR 143
>gi|238787046|ref|ZP_04630846.1| hypothetical protein yfred0001_5300 [Yersinia frederiksenii ATCC
33641]
gi|238724834|gb|EEQ16474.1| hypothetical protein yfred0001_5300 [Yersinia frederiksenii ATCC
33641]
Length = 852
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/345 (9%), Positives = 91/345 (26%), Gaps = 16/345 (4%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y N + EV I S G+ + +R+ G+ VG + + L
Sbjct: 4 FIALLIAGWLVY-----NNWQERGTEVTIDF-QSAAGIVAGRTPIRYQGVEVGMVQSISL 57
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
D + + A I+ D L T + T + + I
Sbjct: 58 D-DDLRNIKVTASIKNDMEDSLREGTQFWLVTPK----ASLAGVSGLDALVGGNYIGMMP 112
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + + + + + +
Sbjct: 113 GEGKPQNHFSALDTQPKFRMNTGELMVHLHAPDLGSLNNGSLVYYRKIPVGKVYDYNIAS 172
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+N + ++ + + +N ++ ++ ++ + ++ +
Sbjct: 173 DNTGVVIDVLIDRRFAKLVKNDTRFWN-VSGFKGDFSLSGASVQMESLAALVNGAIAFDS 231
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + + + V +D L + + + T +
Sbjct: 232 PPNSQNAKSDQPFQLYADLAHSQRGVAITLD-LPNGNNLSEGRTPLIYQGLQVGTLTKMI 290
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
S + ++ + T I N S A L +
Sbjct: 291 LQPDSKVTGELTIDPSVVDLMRTGTRIEMNSPRISLNNANLSELL 335
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 22/115 (19%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 731 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFHQLVRQNTVFWLASGYN 789
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P K +
Sbjct: 790 LEFGLTGGVVKSGTFQQFIRGGIAFATPPTTPLAPKANVNQHFLLNAEEPKDWRN 844
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+T +R+ GI +G++ L L E
Sbjct: 617 DASKLATGMPIRYLGINIGQVESLKLAPERNEV 649
>gi|296141467|ref|YP_003648710.1| hypothetical protein Tpau_3793 [Tsukamurella paurometabola DSM
20162]
gi|296029601|gb|ADG80371.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 330
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/316 (9%), Positives = 88/316 (27%), Gaps = 19/316 (6%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+++ +G V++ + ++ P + + + + VR +G
Sbjct: 14 TRS--VKLGAIAVAVALLITAGLAYV----YLRPPGQKELTFTTQDAALIKSGVEVRASG 67
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--------- 113
+ +G I + LD++ A I + T+ +R +AG Y+
Sbjct: 68 VRIGTIKSVELDRDS---VKVTARIDDGVFVGDQTSVAVRMLTVAGGFYVAVTSAGKAAL 124
Query: 114 -LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ + + + Q P S+ + S + + + I+E +
Sbjct: 125 GDKPIPSSRVNLPYSIGDLLQDVPEKLVPIDRTQLASSIKALSTGLDANPGSVDNIVEGV 184
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ + + ++ + + + + D
Sbjct: 185 NALIGQLTEQRDQVGRIINVSTQYATAFADQRETIMAMIRKASLAIVTLDQTAVNFGKAY 244
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+I + + + + ++ T T + ++ + +
Sbjct: 245 EGLAGMFGKIKPFLDLYWKYREQLGNAFTTVESALKTTNVTIPAMIGELQKSIDAMQQGL 304
Query: 293 KSKETSAFLENIADST 308
+ T + + S
Sbjct: 305 AKQGTPMAPDTVLASK 320
>gi|118462269|ref|YP_884168.1| Mce family protein [Mycobacterium avium 104]
gi|118163556|gb|ABK64453.1| putative Mce family protein [Mycobacterium avium 104]
Length = 372
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 7/135 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
G + S S + + +P +V GL + V G P+G++
Sbjct: 11 RAGATTLLTAVIIATSS---SCTPGSRAGASSFCAIMPDTV-GLYVGNPVTQMGYPIGKV 66
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ H + + L + A IR+ + +EL +
Sbjct: 67 TSIS---SGARHVRVEFSVTEPRTLPQNVKAVIRSPSILADRSLELVGNYASGARLEPGG 123
Query: 129 TERNQRAMITATPSG 143
R++ + S
Sbjct: 124 CIPLGRSVSPKSLSE 138
>gi|319789986|ref|YP_004151619.1| Mammalian cell entry related domain protein [Thermovibrio
ammonificans HB-1]
gi|317114488|gb|ADU96978.1| Mammalian cell entry related domain protein [Thermovibrio
ammonificans HB-1]
Length = 528
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 50/359 (13%), Positives = 117/359 (32%), Gaps = 23/359 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + VG V++ L L+ G + + + GL D+ VR
Sbjct: 1 MGKLSLEAKVGALVIAGLTGLGVIATTLNPLQFKRGVEQKPYLIYFSNAAGLEKDAPVRV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ V + ++ + + LY + A I T GL G Y+E+
Sbjct: 61 AGVTV---GKVVKVGVKDGKAVVEIIFTKPVKLYKNAVAKIETMGLMGEKYVEIDPGHPP 117
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + P+ ++ +++ + Q + K I
Sbjct: 118 APPLPPGSVIEQTQV-----PASMDQVMTSLNQLL------EKFNQAVTTPDGKNRIAII 166
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T N + + + T +N L L +++ ++
Sbjct: 167 MDRINQLTASVNKVVNDVDTLLTENRKNVKKLIENALALTESLREELPQILDNVNNLT-- 224
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q S +++ + V ++R + ++ +D L + + ++T
Sbjct: 225 ------QQLSEVTLENRQDIRQLVRNLRLASDKAPQIAANLDQLTKNLKELLNEQDTKNI 278
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
E +A+ + + + ++ + I N E++ +NL+ + + L K+
Sbjct: 279 KETLANIKATTKELKELLAKVNSGKGTIGKLFND-ESLYANLDKTVKTLGSLAEKVEKT 336
>gi|111023677|ref|YP_706649.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110823207|gb|ABG98491.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 451
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 42/114 (36%), Gaps = 6/114 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-IRIPGSVDG--LSTDSS 57
M + VG V+ ++FF ++Y +D V+ + + G L D+
Sbjct: 1 MSNTTS--VVGRRVLGLVFFLVLALYLALSVGMFDKRFTRVVKVDLVTDTAGNALPPDAD 58
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
V+ G+ VG + ++ +LA + A + + L G Y
Sbjct: 59 VKVRGLIVGEVRSASSQEDEVTLALA-IQPDKAPLIPSDARARLLPKTLFGERY 111
>gi|238791753|ref|ZP_04635390.1| hypothetical protein yinte0001_14690 [Yersinia intermedia ATCC
29909]
gi|238728857|gb|EEQ20374.1| hypothetical protein yinte0001_14690 [Yersinia intermedia ATCC
29909]
Length = 852
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y N + EV I S G+ + +R+ G+ VG + + L
Sbjct: 4 FIALLIAGWLVY-----NNWQDRGTEVTIDF-QSAAGIVAGRTPIRYQGVEVGMVQSISL 57
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
D + + A I+ D L T + T
Sbjct: 58 D-DDLRNIKVTASIKNDMEDSLREGTQFWLVTP 89
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 18/57 (31%), Gaps = 3/57 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
L + V F G+ VG + GL L I + ++ + +
Sbjct: 731 AGSLQVGTPVLFRGLEVGTVTGLNLGAMSDR-VQVSIRISQKFQQLVRQNSVFWLAS 786
Score = 41.8 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 28/379 (7%), Positives = 85/379 (22%), Gaps = 5/379 (1%)
Query: 34 YDGPMAEVIIRIPG-SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDT 91
+ E++I + + L+ S V + IPVG++ + + + R
Sbjct: 130 FRMNTGELMIHLQAPDLGSLNNGSLVYYRKIPVGKVYDYNIAPDNNGVVIDVLIDRRFAK 189
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ T + + S + + A +
Sbjct: 190 LVKNDTRFWNVSGFKGDFSLSGASVQMESLAALVNGAIAFDSPKDSQH---AKPDQPFQL 246
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ T + + ++ + ++T S
Sbjct: 247 YPDLAHSQRGVAITLDLPSGSSLSEGRTPLIYQGLQVGTLTKMTLQPDSKVSGELTIDPS 306
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ S + L ++ + + V+ + + +
Sbjct: 307 VVDLMRAGSRIEMNSPRISLNDAKLSELLTGNTLELIPGEGAPQKHFTVLPSSKSLLQQP 366
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ D + + +++ +AI S
Sbjct: 367 NVLELQLTAPQSYGIDIGQPLSLHGIKIGQVLTRELSADGVIFTAAIEAKYRDLVHKDSK 426
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ L ++ + +A + ++ + +
Sbjct: 427 FVVNSRLDVKLGIDGIDIQGASAQEWIDGGILILPGSKGEALNKYPLYSSVAKATDGILG 486
Query: 392 SIGNNLQNFSQSGLNDIQN 410
+ + + L D+Q
Sbjct: 487 NAPATTLRLTAASLPDVQT 505
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+T +R+ GI +G++ L L E
Sbjct: 617 DASKLATGMPIRYLGINIGQVESLKLAPERNEV 649
>gi|262201127|ref|YP_003272335.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262084474|gb|ACY20442.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 432
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 19/107 (17%), Positives = 39/107 (36%), Gaps = 7/107 (6%)
Query: 10 VGLFVVSILFFSFFSI-----YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
VG+ + ++ + L I+ ++ L S V+ NGIP
Sbjct: 23 VGVLMAMVVVIAGCGSNGIQSIPLPGGVDTGDNARTYRIQF-DNILDLVPQSMVKQNGIP 81
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
VGR+ + + + ++ + L TA+++ L G +
Sbjct: 82 VGRVTKVEV-PGDEWFAQVTVEVKNEVNLSNKATASVQQTSLLGEKF 127
>gi|204930980|ref|ZP_03221806.1| mce related protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204320024|gb|EDZ05229.1| mce related protein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 877
Score = 56.5 bits (133), Expect = 9e-06, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|224583661|ref|YP_002637459.1| hypothetical protein SPC_1880 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468188|gb|ACN46018.1| hypothetical protein SPC_1880 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 877
Score = 56.5 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|161503028|ref|YP_001570140.1| hypothetical protein SARI_01092 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160864375|gb|ABX20998.1| hypothetical protein SARI_01092 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 877
Score = 56.5 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQHLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPSTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|302327351|gb|ADL26552.1| mce-like protein [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 323
Score = 56.5 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 91/313 (29%), Gaps = 8/313 (2%)
Query: 8 TSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
VG+ V+++ FS ++L N + GL +SV+ +G+ VG
Sbjct: 4 LLVGVISTVAVMIFSLVLYHYLYDKNVGVIKDEYKLYSTFDKALGLKKGTSVQISGVDVG 63
Query: 67 RIVGLFLDQEYPNH----SLAKALIRPDTP--LYPSTTA-TIRTQGLAGITYIELSTLRK 119
R+ + + ++ L + I + S A IR Q L I + +
Sbjct: 64 RVTNVSIKKDETGAISDSVLMEFSIEKKYQNLITDSAKAYAIRDQNLISARVINIDIKKN 123
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + T +A T + N +D + L +
Sbjct: 124 KGHVLEDNGTLSAGKAQDIETVIETANELLGRVNRLVDAADELVAMALDTGTTMGALFGS 183
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
A + ++ L + + T D+ T + L
Sbjct: 184 RALYDNLNRQLYRLDEITLLGKNVLKKTSFLLDTMKTGVPTLISRANEVTNNVGNLLDDF 243
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + N+ + +V N V D T Q+ ++ L M
Sbjct: 244 KPLPGQVTTLLNSMDSTVGRVDNLVTDFGAVTTGLQDFMNTTENTLQSADDLMTGMSKMW 303
Query: 300 FLENIADSTSNMR 312
L+ ++
Sbjct: 304 LLKGNVPRHDSVP 316
>gi|114564529|ref|YP_752043.1| hypothetical protein Sfri_3368 [Shewanella frigidimarina NCIMB 400]
gi|114335822|gb|ABI73204.1| Mammalian cell entry related domain protein [Shewanella
frigidimarina NCIMB 400]
Length = 157
Score = 56.5 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 51/132 (38%), Gaps = 2/132 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M ++ VG+F++S L ++ ++ ++ +V GL S V+
Sbjct: 1 MLTRKIELMVGVFLLSGLLAFCVLVFNVANVELKSSAQTYELVAEFNNVGGLKVRSPVKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + + +++ I T GL G +I L+
Sbjct: 61 GGVVVGRVTDITLD-THKLVPIVTLTMDKRFDQFPETSSLAILTSGLLGEQFIGLTPGFM 119
Query: 120 EKKTIFQIATER 131
+ ++
Sbjct: 120 DDDISMLANGDK 131
>gi|84387817|ref|ZP_00990832.1| putative ABC superfamily transport protein [Vibrio splendidus
12B01]
gi|84377332|gb|EAP94200.1| putative ABC superfamily transport protein [Vibrio splendidus
12B01]
Length = 163
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/117 (21%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV+ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKLELWVGTFVIVGICAILIMIFQVADVKGLGSNHTYNLKATFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ VGR+ + LD E + I +++A I T GL G YI L
Sbjct: 64 VVVGRVKSIELDTESYLPI-VELSIDAKYSQFPDTSSAQILTSGLIGEQYISLVPGF 119
>gi|169631585|ref|YP_001705234.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243552|emb|CAM64580.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 416
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/102 (14%), Positives = 29/102 (28%), Gaps = 5/102 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
V +++ S GL V G+ +G + L + + A A I +
Sbjct: 49 FASTYRVTVKLSES-GGLLPRQDVALRGVKIGTVQSLRITPQG---VEATAEILSKYKIP 104
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEK-KTIFQIATERNQRA 135
+ + AG YI + + +
Sbjct: 105 AAAKVRVAGLSPAGEQYINFEGTPGQHGPYLSDGSVIAEGVQ 146
>gi|323258089|gb|EGA41767.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
Length = 560
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 115
>gi|254822747|ref|ZP_05227748.1| Mce4 [Mycobacterium intracellulare ATCC 13950]
Length = 400
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/281 (7%), Positives = 73/281 (25%), Gaps = 13/281 (4%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDG-PMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ + V++ L +F + +LS + + V G V + + V++ G
Sbjct: 7 RRTTVRLAAAVLAGLMVAFAVLTYLSYTAAFASIDTVTVSAPRAGLV--MEKGAKVKYRG 64
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I +G++ + + + I I + I + + +
Sbjct: 65 IQIGKVETIDYSGD---QARLTLGINS------DDMHFIASNAAVHIAGNTIFGAKAVEF 115
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
Q + + R S + ++ + + ++ +
Sbjct: 116 IPPQTPSPTSLRPDAHVAASSVQLEVNTLFQSLIDLLHKVDPVELNGTLSAFA-EGLRGH 174
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ + +L+ + + + + +
Sbjct: 175 GDDLGGILSGLNTLTRQANPKLPALQEDLRKTAVVANVYADSAPNLNTVFDNLPTINKTV 234
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
++ + + + N + Q F + ++
Sbjct: 235 VDQQKNLDKTLLATIGLSNNAYDTLAPAEQDFIDAINRLRA 275
>gi|238789285|ref|ZP_04633072.1| Paraquat-inducible protein B [Yersinia frederiksenii ATCC 33641]
gi|238722617|gb|EEQ14270.1| Paraquat-inducible protein B [Yersinia frederiksenii ATCC 33641]
Length = 541
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/291 (10%), Positives = 71/291 (24%), Gaps = 23/291 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ SV GL + V F GI VG + + +
Sbjct: 271 SIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRVGTVGEVPFFAMGMKQ-----RVD 325
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
D + IR + + + + A ER RA + +
Sbjct: 326 NDFRIP----VLIRIEP---GRFRNDLGPDANFEQTLKQAKERGLRASLKSGNLLTGALF 378
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + A + + + P
Sbjct: 379 VDLDFYPDAKPWKGPLEVVGYPLLPTVSGGL-----------AQIQQKLTQTLDKINHLP 427
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T+ + ++ K ++ +Q + K+ D++ ++ +
Sbjct: 428 LEPMINEATKTLAESQKTMRDTQKTLESLTAITSSPAMQSLPKDLQKTLDELNRSMKGFQ 487
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + ++ + L T N + +
Sbjct: 488 PGSPAYNKMVGDMQRLDQVLRELQPVLRTLNEKSNALVFEAAGSQDPQPKK 538
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 48/406 (11%), Positives = 101/406 (24%), Gaps = 32/406 (7%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
L+ V F G VG + D AK + +R Q G
Sbjct: 161 AGQLNAGDPVLFRGYRVGSVETSTFD--------AKLRL-------------MRYQLFIG 199
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
Y L T +A + + + M S F
Sbjct: 200 APYDSLVTTNVRFWKDSGVAVDLSSQGMRVEMASLATLFSGGVSFDVPD-GLDLGQPITQ 258
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ K + ++ T + + + Q T+ ++
Sbjct: 259 EKPEFKLFDDRSSIQNSLYTEHEDFLLFFSDSVRGLQAGAPVEFRGIRVGTVGEVPFFAM 318
Query: 229 KMIKAIDLQKVNQILENIQVSSNNF---VKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
M + +D +L I+ ++ + R + + L
Sbjct: 319 GMKQRVDNDFRIPVLIRIEPGRFRNDLGPDANFEQTLKQAKERGLRASLKSGNLLTGALF 378
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D +K LE + S A + + +E + + +
Sbjct: 379 VDLDFYPDAKPWKGPLEVVGYPLLPTVSGGLAQIQQKLTQTLDKINHLPLEPMINEATKT 438
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+ + M + Q + T +++NR +
Sbjct: 439 LAESQKTMRDTQKTLESLTAITSSPAMQSLPKDLQKTLDELNRSMKGFQP-----GSPAY 493
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
N + +++L + + L +V+ E + +PK
Sbjct: 494 NKMVGDMQRLDQVLRELQPVLRTLNEKSNALVF--EAAGSQDPQPK 537
>gi|145220616|ref|YP_001131294.1| hypothetical protein Mflv_0010 [Mycobacterium gilvum PYR-GCK]
gi|145213102|gb|ABP42506.1| Mammalian cell entry related domain protein [Mycobacterium gilvum
PYR-GCK]
Length = 545
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/103 (16%), Positives = 36/103 (34%), Gaps = 2/103 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
V V + ++ + + + D P V+ + DGL S V+++G+ V
Sbjct: 15 RQLLVCGVAVLAIVSIVTAVLLVKSTGRLD-PRVRVVAAMVNVGDGLPQRSDVKYHGVLV 73
Query: 66 GRIVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
G + + + PN + + TA + +
Sbjct: 74 GAVDDVTPAENGEPNFVHIDLKPEYAKSIPANVTARVVPSNVF 116
>gi|217325336|ref|ZP_03441420.1| paraquat-inducible protein B [Escherichia coli O157:H7 str.
TW14588]
gi|217321557|gb|EEC29981.1| paraquat-inducible protein B [Escherichia coli O157:H7 str.
TW14588]
Length = 277
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/261 (10%), Positives = 72/261 (27%), Gaps = 15/261 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-------DQEYPNHS 81
S + + ++ SV GL + V F GI +G + +
Sbjct: 7 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPVEFRGIRLGTVSKVPFFAPNMRQTFNDDYRI 66
Query: 82 LAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
I P+ + A + G + + A +
Sbjct: 67 PVLIRIEPERLKMQLGENADVV--EHLGELLKRGLRGSLKTGNLVTGALYVDLDFYPNTP 124
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+ + ++ Q+++E ++K + + +T + K
Sbjct: 125 AITGIREFNGYQIIPTVSGGLAQIQQRLMEALDKINKLPLNPMIEQATSTLSESQRTMKN 184
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ TT + + + + + + S + + + N V ++
Sbjct: 185 LQTTLDSMNKILASQSMQQLPTDMQSTLRELNRSMQGFQPGSA-----AYNKMVADMQRL 239
Query: 261 INTVHDVRETTQTFQEVGQKI 281
+ +++ +T E +
Sbjct: 240 DQVLRELQPVLKTLNEKSNAL 260
>gi|261416046|ref|YP_003249729.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372502|gb|ACX75247.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 336
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/320 (15%), Positives = 93/320 (29%), Gaps = 10/320 (3%)
Query: 1 MESKNYYTSVGLF-VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
ME VG+ V+++ FS ++L N + GL +SV+
Sbjct: 12 MEM--SGLLVGVISTVAVMIFSLVLYHYLYDKNVGVIKDEYKLYSTFDKALGLKKGTSVQ 69
Query: 60 FNGIPVGRIVGLFLDQEYPNH----SLAKALIRPDTP--LYPSTTA-TIRTQGLAGITYI 112
+G+ VGR+ + + ++ L + I + S A IR Q L I
Sbjct: 70 ISGVDVGRVTNVSIKKDETGAISDSVLMEFSIEKKYQNLITDSAKAYAIRDQNLISARVI 129
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ + + + T +A T + N +D +
Sbjct: 130 NIDIKKNKGHVLEDNGTLSAGKAQDIETVIETANELLGRVNRLVDAADELVAMALDTGTT 189
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
L + A + ++ L + + T D+ T +
Sbjct: 190 MGALFGSRALYDNLNRQLYRLDEITLLGKNVLKKTSFLLDTMKTGVPTLISRANEVTNNV 249
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
L + + N+ + +V N V D T Q+ ++ L M
Sbjct: 250 GNLLDDFKPLPGQVTTLLNSMDSTVGRVDNLVTDFGAVTTGLQDFMNTTENTLQSADDLM 309
Query: 293 KSKETSAFLENIADSTSNMR 312
L+ ++
Sbjct: 310 TGMSKMWLLKGNVPRHDSVP 329
>gi|169631642|ref|YP_001705291.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243609|emb|CAM64637.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 510
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/332 (10%), Positives = 95/332 (28%), Gaps = 10/332 (3%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
V++++ + + + +++ V+ + DGL S V++ G+ VG + L
Sbjct: 22 LVMAVVAALVGTALVIKSTGRFN-DYVRVVAELTNVGDGLPAKSDVKYQGVLVGAVDDLT 80
Query: 73 LDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
Q + ++P + S TA + + ++ +EL
Sbjct: 81 PSQRGRPNV-VHINLKPALAHTVPRSVTARVVPSNVFAVSSVELVDHGPGPAITDGAVIP 139
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
+ + I+ + D S I +I + T+ N T +
Sbjct: 140 EDTELPTVLFQTTISKLRDILLANGRGRDDDSVGIFAVIAAATEGRRATLLNAAGQLTRI 199
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
+ ++ I D+ T + ++ + + E +
Sbjct: 200 IDQLNDIVATDTGPSTLSALLDATKGLQTTAPELVDAL----HQAIKPMQTLAEKREQLQ 255
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
+ + T ++ K+ ++ S + +
Sbjct: 256 SLLNAGLHTTGTVRQSLDNQTDRMIDITTKLTPVVGVL--AKNSVHFLPMATRLKVFSDK 313
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNL 342
S + + + I+S + ++
Sbjct: 314 FFSEVWDPEKDVVNIRGILSFTPSTMYTRADC 345
>gi|169631587|ref|YP_001705236.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243554|emb|CAM64582.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 375
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/99 (14%), Positives = 31/99 (31%), Gaps = 4/99 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + + S GL + V G+PVG++ + + + + +
Sbjct: 34 RSATDHITLTAQF-ESASGLYESNVVAVLGMPVGKVTKITPMP---GYVEVQFTVDKNVR 89
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ A + + IELS + + T
Sbjct: 90 VPVDAQAVTLSTSILTDRQIELSPPFRGGPALKDGDTIG 128
>gi|324999476|ref|ZP_08120588.1| MCE family protein [Pseudonocardia sp. P1]
Length = 360
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/340 (10%), Positives = 100/340 (29%), Gaps = 11/340 (3%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
F + L+ + G + R GL +VR +G VG + + L+ +
Sbjct: 26 FGSFQLAELPVFAGSSYQ--ARFTE-GGGLKAGDTVRMSGTAVGDVTSVDLE---DGDVV 79
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ D L TT++I+TQ L G ++ + + A + +
Sbjct: 80 VSFTAK-DVRLGDLTTSSIKTQTLLGERFLNIESRGAATMAAGDEIPLDRTTAPYSISEG 138
Query: 143 GINYFISNAENTSKKISDSSRHIQK----IIENIEKPLTTTIANIETISTVLANNISHID 198
+ + +++ ++ I E I ETI++
Sbjct: 139 LEDLTERTGQVDMQQVGNALDTISDAFAGTPEEIGPAFEGVARLSETIASRDQALRDLFK 198
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ T V + T + + + + + I + + + + + +
Sbjct: 199 RAEQVTGVLKDHTGELQTLIADGNKLLTELEARREIIRELLVRTRAATDQITGFVGEQRE 258
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
++ + ++ + Q I + + + ++ ++ + + +
Sbjct: 259 RLAPALQELNGVLEILQRNEGNITSAVERVAGFITGLGEGLASGPWFNAHGDLGAIPATV 318
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ D + + EL+ +
Sbjct: 319 LPVNDFVPGLALPAPPQQQHQGETLGGLPSVGELVPGLGG 358
>gi|238919690|ref|YP_002933205.1| mce related protein [Edwardsiella ictaluri 93-146]
gi|238869259|gb|ACR68970.1| mce related protein [Edwardsiella ictaluri 93-146]
Length = 879
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 40/143 (27%), Gaps = 7/143 (4%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + L + W+ G V+I S GL + VRF G+ VG + +
Sbjct: 26 FWLLPLVALLTAG-WMG-YTTLQGRGETVVITF-QSAPGLVAGRTPVRFQGVEVGTVSKV 82
Query: 72 FLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIA 128
+ + + L T + T LAG++ ++
Sbjct: 83 SVTPDLNNIEVSVSIQRSMSSALRQGTQFWLVTPKASLAGVSGLDALVGGNYIAMQPGDG 142
Query: 129 TERNQRAMITATPSGINYFISNA 151
R PS
Sbjct: 143 APRQHFIAREGQPSLHPGTDELL 165
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 24/122 (19%), Gaps = 3/122 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
I L + V + G+ VG + GL L + I + ++
Sbjct: 751 IAVDTPDAGSLQIGTPVLYRGMEVGTVTGLTL-GNLGDRVQVALRIGRAYQRLVRTNSVF 809
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + + P+ S
Sbjct: 810 WQASGYNLAFGLTGGVVKTGTFQQFIRGGIAFATPPSTPLAPAAAAGTHFLLHENSPDNW 869
Query: 160 DS 161
Sbjct: 870 QR 871
Score = 39.5 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ +R GI VG+I G L + + ++ + + ++
Sbjct: 407 GIDVGQPLRLKGIRVGQITGRELHDDGVQF-EVVIAPQYRHAIHADSRFVVNSR 459
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 3/63 (4%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ LS S V + IPVG + +D E + + + P A R ++
Sbjct: 172 DLGALSNGSPVYYRKIPVGSVYNYTIDDERQG---VRIDVLIERRFAPLVKAESRFWNIS 228
Query: 108 GIT 110
GI
Sbjct: 229 GIR 231
>gi|213419510|ref|ZP_03352576.1| hypothetical protein Salmonentericaenterica_17611 [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
Length = 250
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
>gi|160898359|ref|YP_001563941.1| hypothetical protein Daci_2918 [Delftia acidovorans SPH-1]
gi|160363943|gb|ABX35556.1| Mammalian cell entry related domain protein [Delftia acidovorans
SPH-1]
Length = 330
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 42/109 (38%), Gaps = 2/109 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
S +L S +++ S +G+S + F+G P+GR+ + L ++ L
Sbjct: 43 GSALYLLYSRGVFDATQRLVLTADDS-EGVSVGMDMTFSGFPIGRVRRIELAEDGNVRIL 101
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ L S+ T+ +GL G T I+ + + A
Sbjct: 102 IDVPRKDAHWLRESSVFTLV-KGLVGGTTIKAYSGILSDPPLPDEAVRP 149
>gi|145223099|ref|YP_001133777.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215585|gb|ABP44989.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 443
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/310 (12%), Positives = 98/310 (31%), Gaps = 8/310 (2%)
Query: 1 MESKNYYTSVG---LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M S + +VG +S F + L + G I++P +V L ++S
Sbjct: 2 MRSVKSWAAVGCAVAVTLSGCAFEGVNSLPLPGAEGRGGDAVTYHIQVP-NVATLESNSP 60
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V + + VG + + + H+ + I+PD + + AT+ L G ++ L+
Sbjct: 61 VMIDDVVVGSVGKMTVQ---NWHADVEVSIKPDVVIPANAVATVGQTSLLGSMHLALNPP 117
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS-KKISDSSRHIQKIIENIEKPL 176
E + + P+ S + + + I + +
Sbjct: 118 LGESPSGRLQPGSTLPLNESSTYPTTEQTLSSLSTVANGGGLGQIGDIIHNMSTGLAGRE 177
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
++ + + + ++ + Q + + + D + + +
Sbjct: 178 DDARELLQRLDNFVGVLAEQREDIVASIQQLRRVAGTFANQQQVIDRALTEIPPAIDVLI 237
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
Q+ Q + ++ V + D+ + + + + + D + +
Sbjct: 238 QERPQFTTALDRLGTFSDTATQLVNDAGDDLVKNLENLGPILGALADVGPDLNLALLWTS 297
Query: 297 TSAFLENIAD 306
+ AD
Sbjct: 298 AFPYGPTFAD 307
>gi|300690569|ref|YP_003751564.1| paraquat-inducible protein B (pqiB) [Ralstonia solanacearum PSI07]
gi|299077629|emb|CBJ50265.2| putative paraquat-inducible protein B (pqiB) [Ralstonia
solanacearum PSI07]
Length = 558
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/411 (9%), Positives = 103/411 (25%), Gaps = 63/411 (15%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
S+ + T S V + + VG++ G LD++ + + P +
Sbjct: 191 SLGSVETGSPVYYRHVEVGQVTGTALDKDGAG---VTIDVFVEAPYH------------- 234
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
Y+ T + + R + + + +
Sbjct: 235 --RYVGRDTQWRHASGLGLQLDAAGLRLNTESFQA-----MLLGGIAFQSSPGQPVGDAV 287
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + E+ A + H D+ + V +T++
Sbjct: 288 PAGTVFSLQSGDSGTTESPDGKPATVVMHFDQSLRGLSVGAAVDFRGVQLGEVTNVGVEF 347
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
D + + + + +R+ L
Sbjct: 348 DPKTHTFVMPVTLSLYPDRLGQAFRASSEYGDSAAGKALLRKLV---------AQGLRGQ 398
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ ++ + + T + I + L+D
Sbjct: 399 LRTGNLLTNQLYVALDM-------------FPNAPPAQLDLSRTPIALPTIPNTLDDLQA 445
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL-- 405
+ A+L ++ + + L +++ R + + ++
Sbjct: 446 QIADLAKTLDRVP----LDRLGAHLGQSLDNARHLFALADAQLAPQARATLAAARQAFDA 501
Query: 406 ------------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
D+ +L +T+ D + ++P+ +VWG+ +
Sbjct: 502 AQAVVQSPLLLPTDLSRAREQLAQTLRALDTLTDTIVQHPESLVWGKTADA 552
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG--LFLDQEYPNHS-LAKA 85
+ DG A V++ S+ GLS ++V F G+ +G + + D +
Sbjct: 301 GTTESPDGKPATVVMHFDQSLRGLSVGAAVDFRGVQLGEVTNVGVEFDPKTHTFVMPVTL 360
Query: 86 LIRPD 90
+ PD
Sbjct: 361 SLYPD 365
>gi|302327497|gb|ADL26698.1| Mce-like protein [Fibrobacter succinogenes subsp. succinogenes S85]
Length = 302
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/119 (17%), Positives = 41/119 (34%), Gaps = 4/119 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M K V + I+ S + + +++ ++ LS + VR
Sbjct: 1 MLFKIKKNFVACLIFLIIVVSCGLAIYYYHPSSPYHKRYTFVVKY-ETIGTLSPGNLVRV 59
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI +G IV + L A + + + ++ + T GL G + + T
Sbjct: 60 RGIAMGEIVDVKL---TDEAVYVSARVLAEAKIPVNSEFRLVTAGLMGEREMSIITGNS 115
>gi|238895410|ref|YP_002920145.1| hypothetical protein KP1_3477 [Klebsiella pneumoniae NTUH-K2044]
gi|238547727|dbj|BAH64078.1| hypothetical protein KP1_3477 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
Length = 891
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
V L + + I+ +D + + I S +G+ + +R+ G+ VG + + L
Sbjct: 42 VIALLIAAWLIW-----TSFDDRGSTITIDF-QSANGIVPGRTPIRYQGVEVGTVQDISL 95
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + A I+ D L T + T
Sbjct: 96 SKD-LSKIEVSASIKRDMKDALRKETQFWLVTP 127
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 28/115 (24%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + GL L + + K I + ++ + +
Sbjct: 771 AGSLGIGTPVLFRGLEVGTVTGLSL-GSMSDRVMVKLRISKRYQYLVRNNSVFWLASGYS 829
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + P + + + K
Sbjct: 830 LDFGLIGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQDGKHFLLQESEPKEWRE 884
>gi|152970897|ref|YP_001336006.1| hypothetical protein KPN_02350 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150955746|gb|ABR77776.1| hypothetical protein KPN_02350 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 877
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
V L + + I+ +D + + I S +G+ + +R+ G+ VG + + L
Sbjct: 28 VIALLIAAWLIW-----TSFDDRGSTITIDF-QSANGIVPGRTPIRYQGVEVGTVQDISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + A I+ D L T + T
Sbjct: 82 SKD-LSKIEVSASIKRDMKDALRKETQFWLVTP 113
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 28/115 (24%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + GL L + + K I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGLSL-GSMSDRVMVKLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + P + + + K
Sbjct: 816 LDFGLIGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQDGKHFLLQESEPKEWRE 870
>gi|261415638|ref|YP_003249321.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372094|gb|ACX74839.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 305
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ K + + +F++ ++ Y+ + +++ ++ LS + VR
Sbjct: 7 KIKKNFVACLIFLIIVVSCGLAIYYY--HPSSPYHKRYTFVVKY-ETIGTLSPGNLVRVR 63
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
GI +G IV + L A + + + ++ + T GL G + + T
Sbjct: 64 GIAMGEIVDVKL---TDEAVYVSARVLAEAKIPVNSEFRLVTAGLMGEREMSIITGNS 118
>gi|145224739|ref|YP_001135417.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145217225|gb|ABP46629.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 391
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/147 (10%), Positives = 42/147 (28%), Gaps = 6/147 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVG 66
+GL ++ + L + + P GL + D+ V+ +G+ VG
Sbjct: 5 VIGLISLAAVASLTAVSVTL--FRDSFAESVPLTVISPR--AGLVMNPDAKVQLHGVQVG 60
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++V + + + T I + + G + L +
Sbjct: 61 KVVSIDYRDDGTAALHLAIDPARQNIIPADVTVDIASTTVFGAKSVRLVPPADPSPSPVH 120
Query: 127 IATERNQRAMITATPSGINYFISNAEN 153
++ + ++ +
Sbjct: 121 AGQILGADRVMIEANTLFEQLVAVLDT 147
>gi|330001321|ref|ZP_08303940.1| hypothetical protein HMPREF9538_01610 [Klebsiella sp. MS 92-3]
gi|328537744|gb|EGF63947.1| hypothetical protein HMPREF9538_01610 [Klebsiella sp. MS 92-3]
Length = 877
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
V L + + I+ +D + + I S +G+ + +R+ G+ VG + + L
Sbjct: 28 VIALLIAAWLIW-----TSFDDRGSTITIDF-QSANGIVPGRTPIRYQGVEVGTVQDISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + A I+ D L T + T
Sbjct: 82 SKD-LSKIEVSASIKRDMKDALRKETQFWLVTP 113
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 28/115 (24%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + GL L + + K I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGLSL-GSMSDRVMVKLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + P + + + K
Sbjct: 816 LDFGLIGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQDGKHFLLQESEPKEWRE 870
>gi|239996523|ref|ZP_04717047.1| putative paraquat-inducible protein B [Alteromonas macleodii ATCC
27126]
Length = 550
Score = 56.1 bits (132), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/285 (15%), Positives = 91/285 (31%), Gaps = 14/285 (4%)
Query: 22 FFSIYWLSRSNQYDGPM---AEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP 78
F + ++ D AE ++ I SV GL+ + V + GI +G + +
Sbjct: 269 AFFTIYGDSTSASDARYKVAAEYLLLIDESVRGLTVGAPVEYRGIEIGNVTAINSFPALD 328
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ + D P+ + + K + ER+ RA +
Sbjct: 329 GNI-----LERDYPIP-----VLINIYPGKARQPDTKEGLSAIKQTIRNWLERDLRASLR 378
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
+ + +S + ++ + + + + I+ +
Sbjct: 379 MGNVLTGGLYVDLQ-HVPDADSNSGIEVINGYEVIPTVSNEFTQLTQKADAILDKINQLP 437
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
V D + ++ + D +I ID + +N L + VS + +K+
Sbjct: 438 LKEMVENVQLAVEDMRLAAESVETASSDFDVLIADIDAKALNSNLNQVLVSLDGLLKNYS 497
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ +++ET QE + I LL + S S E
Sbjct: 498 EGGFNQSEIKETVDALQETMRNIQPLLLKLNQSPNSLIFSKDDEA 542
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/401 (9%), Positives = 108/401 (26%), Gaps = 25/401 (6%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
+ + G VG + E + D + I
Sbjct: 174 KPGDPIIYKGFKVGEFEDATFNIEERV-------VYYDAFIEAPYHKLITNTTRFWDVSG 226
Query: 113 ELSTLRKEKKTIFQIATERN-QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L ++ + E + P G+ +N I S
Sbjct: 227 VKLLLESNGVSVETGSLETLLANGITFGIPDGVPKGEQVLDNAFFTIYGDSTSASDARYK 286
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ I TV A ++ + T + + N + ++
Sbjct: 287 VAAEYLLLIDESVRGLTVGAPVEYRGIEIGNVTAINSFPALDGNILERDYPIPVLINIYP 346
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ L I+ + N+++ + + +V + H+ S+
Sbjct: 347 GKARQPDTKEGLSAIKQTIRNWLERDLRASLRMGNVLTGGLYV-----DLQHVPDADSNS 401
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + + + + + ++ ++ +++
Sbjct: 402 GIEVINGYEVIPTVSNEFTQLTQKADAILDKINQLPLKEMVENVQLAVEDMRLAAESVET 461
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
S + + A + +L + + + + + + ++I+
Sbjct: 462 ASSDFDVLIADIDAKALNSNLNQVLVSLDGLLKNYSE------------GGFNQSEIKET 509
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
V LQET+ + L ++P +++ ++ + K K+
Sbjct: 510 VDALQETMRNIQPLLLKLNQSPNSLIFSKDDEADIQPKAKN 550
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 40/456 (8%), Positives = 123/456 (26%), Gaps = 43/456 (9%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
+ + + ++ + +Y+ +I S G+ + + ++ + +G+
Sbjct: 21 RIWIIPILVIVIGGWMVYY------QWKNQGPLITIELHSATGIEVNKTPIKVRDLDIGQ 74
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ-----------GLAGITYIEL 114
+ + L + L A I L + + L +YI +
Sbjct: 75 VKKITLKPDLNG-VLVTARIDASAAHLLNENAKFWVVAPRISFSEVSGLNTLLSGSYIAM 133
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
S K K+ + A E + + G++ + + + + K D + + E
Sbjct: 134 SAHDKGKEQLHFTALE--RPPVTPPGTPGLHVMLKSDDEFAYKPGDPIIYKGFKVGEFED 191
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + + + + + + I
Sbjct: 192 ATFNIEERVVYYDAFIEAPYHKLITNTTRFWDVSGVKLLLESNGVSVETGSLETLLANGI 251
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK-IDHLLSDFSSKMK 293
+ + + QV N F + + + + + + L + +
Sbjct: 252 TFGIPDGVPKGEQVLDNAFFTIYGDSTSASDARYKVAAEYLLLIDESVRGLTVGAPVEYR 311
Query: 294 SKETSAFL-ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
E N + + + + S + + + + E
Sbjct: 312 GIEIGNVTAINSFPALDGNILERDYPIPVLINIYPGKARQPDTKEGLSAIKQTIRNWLER 371
Query: 353 MSKINNISALKENNSLFKDAQ-----------------RAMHTFRDTSEKINRYIPSIGN 395
+ + L+ D Q + T + ++ + +I +
Sbjct: 372 DLRASLRMGNVLTGGLYVDLQHVPDADSNSGIEVINGYEVIPTVSNEFTQLTQKADAILD 431
Query: 396 NLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ + + ++Q V ++ + ++F+
Sbjct: 432 KINQLPLKEMVENVQLAVEDMRLAAESVETASSDFD 467
>gi|109898024|ref|YP_661279.1| hypothetical protein Patl_1704 [Pseudoalteromonas atlantica T6c]
gi|109700305|gb|ABG40225.1| Mammalian cell entry related protein [Pseudoalteromonas atlantica
T6c]
Length = 554
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 87/284 (30%), Gaps = 12/284 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
A+ +I + +V GL + V + GI VG+++ + + +
Sbjct: 283 KESAKFVILVEDTVRGLHVGAPVEYRGIKVGKVLDINPPNANQQK-----WLDAGVAIP- 336
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
I Q + K E RA + N E +
Sbjct: 337 ---VVIGIQPGRVEQ-TDDDIGIKFINQQITTWVENGFRASLQTGNLLTGALFVNLEQYA 392
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
S Q + ++ + I + +NI+ ++ + + D
Sbjct: 393 NLPSVEMEKFQDY--PVIPSISNEFSQITEKVGAILDNINDMNLVQLSEAANKMMDDISA 450
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ N++ +K ++ Q+V+ L N K T +++ +T T Q
Sbjct: 451 SANSMNSTADDFSGTLKQMEEQQVSVKLANALAGIAELTKGFSAGSKTNNEINQTLDTLQ 510
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ +++ LL + + S + + ++ +
Sbjct: 511 QRLRELQPLLLELNQAPNSLIFDKAPKPYLQPGISNNNTQQERK 554
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/402 (9%), Positives = 102/402 (25%), Gaps = 34/402 (8%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
V + G+ VG ++ + E + Y
Sbjct: 171 KEGDPVIYKGLKVGEFESIYFNFEER---------------------VVYYNTFIQAPYH 209
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+L T + + + + S + + + +
Sbjct: 210 KLITTNTKFWNTSGVEMDIGANGFKVKSSSIETLITNGVAFGVPEGMPQGNRVSERSYFN 269
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ A E A + ++ + V + D+ K
Sbjct: 270 IHDSYDSAA--EERYKESAKFVILVEDTVRGLHVGAPVEYRGIKVGKVLDINPPNANQQK 327
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+D ++ IQ + + + + +LL+
Sbjct: 328 WLDAGVAIPVVIGIQPGRVEQTDDDIGIKFINQQITTWVENGFRASLQTGNLLTGALFVN 387
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQK-IISTINTIENITSNLNDSSQKFAE 351
+ + + + + I N+ +++ +
Sbjct: 388 LEQYANLPSVEMEKFQDYPVIPSISNEFSQITEKVGAILDNINDMNLVQLSEAANKMMDD 447
Query: 352 LMSKINNISALKEN-NSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS--QSGLNDI 408
+ + N++++ ++ + K + + S K+ + I + FS N+I
Sbjct: 448 ISASANSMNSTADDFSGTLKQMEE-----QQVSVKLANALAGIAELTKGFSAGSKTNNEI 502
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ LQ+ + L + P +++ +K +P
Sbjct: 503 NQTLDTLQQRLRELQPLLLELNQAPNSLIF--DKAPKPYLQP 542
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/451 (8%), Positives = 117/451 (25%), Gaps = 36/451 (7%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGR 67
+ L + + + Y +Q+ + I + GL + ++ + + VG
Sbjct: 18 KIWLVPIVAICMGAWMFY-----HQWSNQGPLISIVF-ENASGLEVGKTKIKMHNVDVGE 71
Query: 68 IVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTAT-----IRTQGLAGITYIELSTLRKEK 121
+ + L ++ A+ + L ST I G++G+ + T
Sbjct: 72 VKTIALTEDLQKVLVTARMSAHSEGLLRESTEFWAVNPRISLNGISGLNTLVSGTYINMS 131
Query: 122 KTIFQIA------------TERNQRAMITATPSGINYFISNAE----------NTSKKIS 159
+ + T + S + +
Sbjct: 132 TNLEGPSSRDFVALSAPPITPSGTPGLHVTLNSDAEFAFKEGDPVIYKGLKVGEFESIYF 191
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + I+ P I + + + +
Sbjct: 192 NFEERVVYYNTFIQAPYHKLITTNTKFWNTSGVEMDIGANGFKVKSSSIETLITNGVAFG 251
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ + + +++ + + + K V +TV + +
Sbjct: 252 VPEGMPQGNRVSERSYFNIHDSYDSAAEERYKESAKFVILVEDTVRGLHVGAPVEYRGIK 311
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
L + + + K A + +I + T
Sbjct: 312 VGKVLDINPPNANQQKWLDAGVAIPVVIGIQPGRVEQTDDDIGIKFINQQITTWVENGFR 371
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
++L + L + + L + + + +I + +I +N+ +
Sbjct: 372 ASLQTGNLLTGALFVNLEQYANLPSVEMEKFQDYPVIPSISNEFSQITEKVGAILDNIND 431
Query: 400 FSQSGLNDIQ-NLVRKLQETVNHFDDCLNNF 429
+ L++ ++ + + N + ++F
Sbjct: 432 MNLVQLSEAANKMMDDISASANSMNSTADDF 462
>gi|262041947|ref|ZP_06015130.1| paraquat-inducible protein B [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259040753|gb|EEW41841.1| paraquat-inducible protein B [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 877
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
V L + + I+ +D + + I S +G+ + +R+ G+ VG + + L
Sbjct: 28 VIALLIAAWLIW-----TSFDDRGSTITIDF-QSANGIVPGRTPIRYQGVEVGTVQDISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + A I+ D L T + T
Sbjct: 82 SKD-LSKIEVSASIKRDMKDALRKETQFWLVTP 113
Score = 45.3 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 28/115 (24%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + GL L + + K I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGLSL-GSMSDRVMVKLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + P + + + K
Sbjct: 816 LDFGLIGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQDGKHFLLQESEPKEWRE 870
>gi|206578215|ref|YP_002237779.1| mce-related protein [Klebsiella pneumoniae 342]
gi|206567273|gb|ACI09049.1| mce-related protein [Klebsiella pneumoniae 342]
Length = 877
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
V L + + I+ +D + + I S +G+ + +R+ G+ VG + + L
Sbjct: 28 VIALLIAAWLIW-----TSFDDRGSTITIDF-QSANGIVPGRTPIRYQGVEVGTVQDISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + A I+ D L T + T
Sbjct: 82 SKD-LSKIEVSASIKRDMKDALRKETQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 27/115 (23%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + GL L + + K I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGLSL-GSMSDRVMVKLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + P + + K
Sbjct: 816 LDFGLIGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQDGKHFLLLESEPKEWRE 870
>gi|288934705|ref|YP_003438764.1| hypothetical protein Kvar_1831 [Klebsiella variicola At-22]
gi|288889414|gb|ADC57732.1| Mammalian cell entry related domain protein [Klebsiella variicola
At-22]
Length = 877
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
V L + + I+ +D + + I S +G+ + +R+ G+ VG + + L
Sbjct: 28 VIALLIAAWLIW-----TSFDDRGSTITIDF-QSANGIVPGRTPIRYQGVEVGTVQDISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + A I+ D L T + T
Sbjct: 82 SKD-LSKIEVSASIKRDMKDALRKETQFWLVTP 113
Score = 43.8 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 27/115 (23%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + GL L + + K I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGLSL-GSMSDRVMVKLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P + + K
Sbjct: 816 LDFGLVGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQDGKHFLLLESEPKEWRE 870
>gi|1556426|emb|CAA50257.1| Mcep protein [Mycobacterium tuberculosis]
Length = 432
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 37/100 (37%), Gaps = 7/100 (7%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FL 73
+L F+ + P ++ + GL S V +NG+ +GR+ + +
Sbjct: 1 MLVFALVVALVYLQFRGEFTPKTQLTMLSAR--AGLVMDPGSKVTYNGVEIGRVDTISEV 58
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
++ + + + P + + A I+ + G Y
Sbjct: 59 TRDGESAAKFILDVDPRYIHLIPANVNADIKATTVFGGKY 98
>gi|289810499|ref|ZP_06541128.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 270
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 4 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 57
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 58 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 89
>gi|290508836|ref|ZP_06548207.1| yebT [Klebsiella sp. 1_1_55]
gi|289778230|gb|EFD86227.1| yebT [Klebsiella sp. 1_1_55]
Length = 877
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 37/93 (39%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
V L + + I+ +D + + I S +G+ + +R+ G+ VG + + L
Sbjct: 28 VIALLIAAWLIW-----TSFDDRGSTITIDF-QSANGIVPGRTPIRYQGVEVGTVQDISL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + A I+ D L T + T
Sbjct: 82 SKD-LSKIEVSASIKRDMKDALRKETQFWLVTP 113
Score = 45.3 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 28/115 (24%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + GL L + + K I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGLSL-GSMSDRVMVKLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P + + + K
Sbjct: 816 LDFGLVGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQDGKHFLLQESEPKEWRE 870
>gi|15642514|ref|NP_232147.1| hypothetical protein VC2518 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121591417|ref|ZP_01678697.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121727452|ref|ZP_01680580.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147673144|ref|YP_001218016.1| hypothetical protein VC0395_A2100 [Vibrio cholerae O395]
gi|153215707|ref|ZP_01950088.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|153818000|ref|ZP_01970667.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|153822434|ref|ZP_01975101.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|153825784|ref|ZP_01978451.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|227082637|ref|YP_002811188.1| hypothetical protein VCM66_2440 [Vibrio cholerae M66-2]
gi|229507424|ref|ZP_04396929.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae BX 330286]
gi|229509651|ref|ZP_04399132.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae B33]
gi|229513444|ref|ZP_04402908.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae TMA 21]
gi|229516776|ref|ZP_04406222.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae RC9]
gi|229521584|ref|ZP_04411002.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae TM 11079-80]
gi|229524501|ref|ZP_04413906.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae bv. albensis VL426]
gi|229527547|ref|ZP_04416939.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae 12129(1)]
gi|229606931|ref|YP_002877579.1| ABC transporter periplasmic protein [Vibrio cholerae MJ-1236]
gi|254291436|ref|ZP_04962228.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|254851062|ref|ZP_05240412.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255744504|ref|ZP_05418456.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholera CIRS 101]
gi|262154672|ref|ZP_06028798.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae INDRE 91/1]
gi|262167548|ref|ZP_06035253.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae RC27]
gi|262191034|ref|ZP_06049243.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae CT 5369-93]
gi|297581365|ref|ZP_06943288.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|298500652|ref|ZP_07010456.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9657101|gb|AAF95660.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546733|gb|EAX56908.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
gi|121630224|gb|EAX62624.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|124114625|gb|EAY33445.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|126511435|gb|EAZ74029.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|126520077|gb|EAZ77300.1| conserved hypothetical protein [Vibrio cholerae B33]
gi|146315027|gb|ABQ19566.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|149740507|gb|EDM54622.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|150422626|gb|EDN14581.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|227010525|gb|ACP06737.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227014408|gb|ACP10618.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229335179|gb|EEO00664.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae 12129(1)]
gi|229338082|gb|EEO03099.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae bv. albensis VL426]
gi|229341178|gb|EEO06182.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae TM 11079-80]
gi|229345839|gb|EEO10811.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae RC9]
gi|229349321|gb|EEO14277.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae TMA 21]
gi|229353125|gb|EEO18064.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae B33]
gi|229354929|gb|EEO19850.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae BX 330286]
gi|229369586|gb|ACQ60009.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae MJ-1236]
gi|254846767|gb|EET25181.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255738029|gb|EET93422.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholera CIRS 101]
gi|262024001|gb|EEY42697.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae RC27]
gi|262030512|gb|EEY49150.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae INDRE 91/1]
gi|262033097|gb|EEY51626.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae CT 5369-93]
gi|297534203|gb|EFH73041.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297540821|gb|EFH76878.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|327485005|gb|AEA79412.1| Uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
cholerae LMA3894-4]
Length = 163
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSSNTYRLTAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ + L+ + I +++ I T GL G Y+ L +
Sbjct: 64 VVVGRVESIALNPKNL-LPTVTLAIDSQFNQFPENSSLQILTSGLIGEQYLSLVPGFVFE 122
Query: 122 KTIFQIATER 131
+R
Sbjct: 123 DEAMLKEGDR 132
>gi|254819942|ref|ZP_05224943.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 376
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + ++P V L +S VR N + VG ++ + L ++L I
Sbjct: 26 LPGTKGGGPGAYTIRAQMPD-VQNLQRNSRVRVNDVTVGNVIDIELQG---WNALVTMTI 81
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATER 131
D L + TAT+ L G ++E + + +
Sbjct: 82 DGDVDLPANATATLGQTSLLGSVHVELAPPAGVAPQGKLKNGSLIP 127
>gi|205359831|ref|ZP_03224427.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205342693|gb|EDZ29457.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320085644|emb|CBY95422.1| Uncharacterized protein yebT [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
Length = 877
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
++ + L T + T
Sbjct: 82 SKDLRKIGVRVSIKSDMEDALREETQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 816 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 870
>gi|260770987|ref|ZP_05879916.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
furnissii CIP 102972]
gi|260614224|gb|EEX39414.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
furnissii CIP 102972]
gi|315179033|gb|ADT85947.1| hypothetical ABC superfamily transport protein [Vibrio furnissii
NCTC 11218]
Length = 164
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ ++ ++ L S V+ G
Sbjct: 4 TRKLEFWVGSFVLAGICAILVMIFQVADVKGIGSNDTYLVQAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ + LD E S I +++ I T GL G YI L
Sbjct: 64 VVVGRVQSIALDTERLLPS-VTLAIDSRYNQFPENSSVQILTSGLIGEQYISLIPGFIFD 122
Query: 122 KTIFQIATER 131
+R
Sbjct: 123 DEEMLKDGDR 132
>gi|284043085|ref|YP_003393425.1| hypothetical protein Cwoe_1622 [Conexibacter woesei DSM 14684]
gi|283947306|gb|ADB50050.1| Mammalian cell entry related domain protein [Conexibacter woesei
DSM 14684]
Length = 446
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 33/323 (10%), Positives = 98/323 (30%), Gaps = 11/323 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G + + L + V+ G VG + + L P PL+
Sbjct: 26 GGGGEQYRLVFQT-AGQLVRGNDVQIGGRRVGSVESIELTDNNLAEVKISVK-EPYAPLH 83
Query: 95 PSTTATIRTQGLAG--ITYIELSTLRKEKKTIFQIATERNQR-----AMITATPSGINYF 147
TTATIR L+ YIELS + + +R + +
Sbjct: 84 EGTTATIRLSSLSSVANRYIELSPGPNNAPKLAANSLLGVERTTSVVDIDQLFNTFDERT 143
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
++ + + + I K + +++ + L+++ + +++ + +T
Sbjct: 144 RRGLQDLIQGSATQYAGRTREIGEASKYFSPFLSSTNNLVRELSSDTATLEQALVSTSRV 203
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
S + + + A + + + L+ + + + + +T+ D+
Sbjct: 204 MSSVAERRDELSALIGSLNTMMGAIATENSGLAEALDELPGTLREANVTFVDLRSTLDDL 263
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ + + ++F + + ++++ + + + +
Sbjct: 264 DPLVNASKPATKNLARFFAEFRPLVDEA--TPTFTDLSEFVNTAGPNNDITDIVRQLPKL 321
Query: 328 IISTINTIENITSNLNDSSQKFA 350
+ ++ +
Sbjct: 322 QQVGSPSFKHSVDAMRQGQPVVD 344
>gi|254774790|ref|ZP_05216306.1| LprM [Mycobacterium avium subsp. avium ATCC 25291]
Length = 350
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 32/284 (11%), Positives = 77/284 (27%), Gaps = 9/284 (3%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
L + + ++P V + ++ VR + + VG + + L H+L
Sbjct: 4 LRLPGTAGGGPGSYTIQAQMPDVVT-IQENTRVRVDDVNVGNVTKIELQ---DWHALVTM 59
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATERNQRAMITATPSG 143
I D L ++TA + L G +IE + + RA + T
Sbjct: 60 RIDGDVHLPANSTAKLGQTSLLGSMHIELAPPKDEPPVGRLTAGSVIPLSRASLYPTTEQ 119
Query: 144 INYFISNA---ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+S + + + + E I+ I
Sbjct: 120 TLASVSILLNGGGIGQLQEITRAVAKAFAGREADMRSLLSQIDEFIAHTNEQTDDIIAAA 179
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ + + + + + ++ + + I + S+
Sbjct: 180 ENLNALAGQVAAADPVVDKALTSVPKALAVLAQERTKIADTIDRVGKFSAIAADTIHQSK 239
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ V ++R + + L ++ + N
Sbjct: 240 QSLVDNLRNIAPVLRSLADAGPSLTRGLDGLATYPWPASTVRNW 283
>gi|254392560|ref|ZP_05007738.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|294816014|ref|ZP_06774657.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|326444356|ref|ZP_08219090.1| putative Mce family protein [Streptomyces clavuligerus ATCC 27064]
gi|197706225|gb|EDY52037.1| secreted protein [Streptomyces clavuligerus ATCC 27064]
gi|294328613|gb|EFG10256.1| Secreted protein [Streptomyces clavuligerus ATCC 27064]
Length = 411
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 37/114 (32%), Gaps = 8/114 (7%)
Query: 1 MESKNYYTSV-GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M +K + G+ + + + + V + + + + + V+
Sbjct: 1 MNAKRLRLRLAGVVFLLVPALLVGVSV--AVYEKEFSDDVTVTLLTGSTGNEMHRGAEVK 58
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITY 111
G+ +G + + + + + IRP + TA + L G +
Sbjct: 59 MRGVVIGSVRSIRAEGDG---ARLTLAIRPGELHRVPADVTAQMLPTTLFGQRF 109
>gi|171056703|ref|YP_001789052.1| hypothetical protein Lcho_0011 [Leptothrix cholodnii SP-6]
gi|170774148|gb|ACB32287.1| Mammalian cell entry related domain protein [Leptothrix cholodnii
SP-6]
Length = 324
Score = 55.7 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ +L + P V++ S +G+ + F+G P+GR+ + L + +
Sbjct: 37 GTALYLMYARGTFEPTQRVVLVADDS-EGVRVGMDLTFSGFPIGRVRRIELAADGSARVV 95
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ L ++ T+ + L G ++ + + A R
Sbjct: 96 IDVPRKDAHWLRETSVFTLV-RSLVGGASLKAYSGVLTDPPLADGAERR 143
>gi|134103291|ref|YP_001108952.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
gi|133915914|emb|CAM06027.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 457
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/116 (14%), Positives = 39/116 (33%), Gaps = 8/116 (6%)
Query: 1 MESKNYYT-----SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
M ++ T +G+ + + + + +V++ + L D
Sbjct: 1 MSTRGAMTTLRRRLLGVAFLMTIVLFLSLTV--ATYQRAFTSSVDVVLHTASVGNQLMAD 58
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
S V+ G+ VGR+ + + + L + +A + + L G Y
Sbjct: 59 SDVKVRGMIVGRVREIEPTADG-AKLHLALEPDKASRLPANVSARLLPRTLFGERY 113
>gi|157373085|ref|YP_001481074.1| paraquat-inducible protein B [Serratia proteamaculans 568]
gi|157324849|gb|ABV43946.1| Mammalian cell entry related domain protein [Serratia
proteamaculans 568]
Length = 547
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/266 (12%), Positives = 86/266 (32%), Gaps = 14/266 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
++ SV GL + V F GI +G + + +E H ++ D +
Sbjct: 290 YLMFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFFKEGIEH-----RLKNDYRIP--VLIH 342
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
I + L + + E + + + + + + +
Sbjct: 343 IEPERLKAL-------GKDFDFDSSLKDAESRGIRASLKSANLLTGSLYIDLDFNPQDKP 395
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + +A I+ + I+ I + T ++S+ T +
Sbjct: 396 WDGPHELFGYPLIPTTSGGLAQIQQKLVQTLDKINAIPLTPMINEATKTLAESQRTMKST 455
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ SL+ +I + +++ + Q ++ N +K + + Q +V ++
Sbjct: 456 QKTMKSLNDIISSKEVKALPQEMQKTLQELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRE 515
Query: 281 IDHLLSDFSSKMKSKETSAFLENIAD 306
+ +L + K + A N
Sbjct: 516 LQPVLHTLNEKSNALVFEAAASNDPQ 541
Score = 51.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 38/454 (8%), Positives = 109/454 (24%), Gaps = 41/454 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIP---GSVDGLST------------D 55
G+ + L + + +++ P GL
Sbjct: 116 GVSGLGTLLSGAYIELQPGTKGKDGKDAYQLLDAPPLASADAKGLRIVLDSEKSGQLNAG 175
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
V F+ VG + + D + + + P T+ +R +G+T+ +
Sbjct: 176 DPVLFHNYRVGSVETSYFDPKQRA---MRYQLFISAPYDQLVTSNVRFWKDSGVTFDMSA 232
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + AE + + I +++
Sbjct: 233 QGMRVEMGSLATLFSGGVSFDVPDGWDRGEKAKEKAEYRLF------DNQRSIQDSLYTV 286
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ L + + V + + + + + +
Sbjct: 287 HKDYLMFFSDSVRGLQPGAPVEFRGIRLGTVAQVPFFKEGIEHRLKNDYRIPVLIHIEPE 346
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
K + S + + ++ + D
Sbjct: 347 RLKALGKDFDFDSSLKDAESRGIRASLKSANLLTGSLYIDLDFNPQDKPWDGPHELFGYP 406
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+A + ++ + IN + + + + M
Sbjct: 407 LIPTTSGGLAQIQQKLVQTLD-----KINAIPLTPMINEATKTLAESQRTMKSTQKTMKS 461
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+N+I + KE +L ++ Q+ + + + N + +++L
Sbjct: 462 LNDIISSKEVKALPQEMQKTLQELNRSMKGFQP------------GSPAYNKMVGDMQRL 509
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ + L+ +V+ + K
Sbjct: 510 DQVLRELQPVLHTLNEKSNALVFEAAASNDPQPK 543
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 45/492 (9%), Positives = 137/492 (27%), Gaps = 56/492 (11%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
++ + + +V+ L ++ Y S V++ + + +GL + ++
Sbjct: 15 TRWSPVWI-VPIVTALIGAWILFYHFSHQG-------PVVMLVTTTAEGLEAGKTKIKSR 66
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRP--DTPLYPSTTATI-----------RTQGLAG 108
+ VG + + L + + +A + D L T + L
Sbjct: 67 SVDVGVVETVTLS-DDLSKVRVQARLNSGMDKLLRQDTAFWVVKPQIGREGVSGLGTLLS 125
Query: 109 ITYIELSTL-------RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
YIEL + + + + S + ++ +
Sbjct: 126 GAYIELQPGTKGKDGKDAYQLLDAPPLASADAKGLRIVLDSEKSGQLNAGDPVLFHNYRV 185
Query: 162 SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN------ 215
+ ++ + + ++ +N+ T ++ +
Sbjct: 186 GSVETSYFDPKQRAMRYQLFISAPYDQLVTSNVRFWKDSGVTFDMSAQGMRVEMGSLATL 245
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
++ + + + ++ +N + ++ + D Q
Sbjct: 246 FSGGVSFDVPDGWDRGEKAKEKAEYRLFDNQRSIQDSLYTVHKDYLMFFSDSVRGLQPGA 305
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
V + L + + L+N + ++ + S +
Sbjct: 306 PVEFRGIRLGTVAQVPFFKEGIEHRLKNDYRIPVLIHIEPERLKALGKDFDFDSSLKDAE 365
Query: 336 ENITSNLNDSSQKFAELM-SKIN------------NISALKENNSLFKDAQRAMHTFRDT 382
S+ + ++ + + + T
Sbjct: 366 SRGIRASLKSANLLTGSLYIDLDFNPQDKPWDGPHELFGYPLIPTTSGGLAQIQQKLVQT 425
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN--NFERNPQDIVWGR 440
+KIN + + ++ L + Q ++ Q+T+ +D ++ + PQ++
Sbjct: 426 LDKINAI--PLTPMINEATK-TLAESQRTMKSTQKTMKSLNDIISSKEVKALPQEMQKTL 482
Query: 441 E--KGSVKIYKP 450
+ S+K ++P
Sbjct: 483 QELNRSMKGFQP 494
>gi|213859847|ref|ZP_03385551.1| hypothetical protein SentesT_26261 [Salmonella enterica subsp.
enterica serovar Typhi str. M223]
Length = 165
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
>gi|269139001|ref|YP_003295702.1| paraquat-inducible protein B [Edwardsiella tarda EIB202]
gi|267984662|gb|ACY84491.1| paraquat-inducible protein B [Edwardsiella tarda EIB202]
gi|304558937|gb|ADM41601.1| Paraquat-inducible protein B [Edwardsiella tarda FL6-60]
Length = 879
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/143 (16%), Positives = 41/143 (28%), Gaps = 7/143 (4%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + L + W+ G V+I S GL + VRF G+ VG + +
Sbjct: 26 FWLLPLVALLTAG-WMG-YTTLQGRGETVVITF-QSAPGLVAGRTPVRFQGVEVGTVSKV 82
Query: 72 FLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIA 128
+ + + L T + T LAG++ ++
Sbjct: 83 SVTPDLKSIEVSVNIQRSMSSALRQGTQFWLVTPKASLAGVSGLDALVGGNYIAMQPGDG 142
Query: 129 TERNQRAMITATPSGINYFISNA 151
R + PS
Sbjct: 143 APRQRFIAREEQPSLHPGTDELL 165
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 11/122 (9%), Positives = 22/122 (18%), Gaps = 3/122 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
I L + V + G+ VG + GL L I + ++
Sbjct: 751 IAVDTQDAGSLQIGTPVLYRGMEVGTVTGLTLGSLGDR-VQVALRIGRAYQRLVRTNSVF 809
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + + P+
Sbjct: 810 WQASGYNLAFGLTGGVVKTGTFQQFIRGGIAFATPPSTPLAPAAPTGTHFLLHENPPDDW 869
Query: 160 DS 161
Sbjct: 870 QR 871
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ +R GI VG++ G L ++ ++ + + ++
Sbjct: 407 GIDVGQPLRLKGIRVGQVTGREL-RDDDVQFEVVIAPPYRHAIHADSRFVVNSR 459
>gi|118468242|ref|YP_885540.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118169529|gb|ABK70425.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 373
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 30/92 (32%), Gaps = 4/92 (4%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
V + S GL + V G+PVG + + + + + + A
Sbjct: 38 TVTAQF-DSAAGLYEGNVVAVLGMPVGEVKKIR---NRNGYVEVEFTVDKGVNIPADVQA 93
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + IEL+ + T+ AT
Sbjct: 94 ATISNSILTDRQIELTPPYRGGPTLQNNATIG 125
>gi|118463194|ref|YP_881728.1| virulence factor Mce [Mycobacterium avium 104]
gi|118164481|gb|ABK65378.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 386
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + ++P V L +S VR N + VG ++ + L ++L I
Sbjct: 36 LPGTKGGGPGAYTIRAQMPD-VQNLQRNSRVRVNDVTVGNVIDIELQG---WNALVTMTI 91
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATER 131
D L + TAT+ L G ++E + + +
Sbjct: 92 DGDVDLPANATATLGQTSLLGSVHVELAPPAGVAPQGKLKNGSLIP 137
>gi|318059760|ref|ZP_07978483.1| secreted protein [Streptomyces sp. SA3_actG]
gi|318075805|ref|ZP_07983137.1| secreted protein [Streptomyces sp. SA3_actF]
Length = 344
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/273 (8%), Positives = 69/273 (25%), Gaps = 9/273 (3%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
V +V G+ S +R G+ VG++V + I
Sbjct: 36 GVRAASPGGTRVTAYFDRAV-GVYEGSDLRILGVRVGKVVAVRPQG---TKVGVVLDIDH 91
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER-----NQRAMITATPSGI 144
+ + A + Y++L+ + + A + S
Sbjct: 92 GVDVPANARAVAVAPSVVADRYVQLTPAYTKGPRLRDGAVLPLSRNRTPVEIDQLYDSLT 151
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ + + S + +N++ +IE ++++ T
Sbjct: 152 DLSKALGPEGANADGALSDLLDTGAKNLKGNGAAIGESIEQFGKAAKTLDGSSEELLTTL 211
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ ++ + + + ++ + V +
Sbjct: 212 SQLQSFTTMLKDQDSSVRTAQENLDSVTTYLADDRDDLAAALKELGTALGRVKTFVQDNR 271
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++++ + Q + + + +
Sbjct: 272 GELKKNVDRLVPLTQTLVDQRKSLAEALDTAPL 304
>gi|148239988|ref|YP_001225375.1| hypothetical protein SynWH7803_1652 [Synechococcus sp. WH 7803]
gi|147848527|emb|CAK24078.1| Conserved hypothetical protein [Synechococcus sp. WH 7803]
Length = 287
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 33/82 (40%), Gaps = 1/82 (1%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
R ++ V + + + GL + VR +G PVG++ L L + +
Sbjct: 32 REQRWGTRFVNVYL-LASDISGLHSGEEVRISGFPVGQVGALELKPDARVRVQLRIEQSK 90
Query: 90 DTPLYPSTTATIRTQGLAGITY 111
+ P ++A + +G G +
Sbjct: 91 ARLIGPGSSARLDQEGFVGDRF 112
>gi|294790163|ref|ZP_06755321.1| putative phage infection protein [Scardovia inopinata F0304]
gi|294458060|gb|EFG26413.1| putative phage infection protein [Scardovia inopinata F0304]
Length = 773
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/435 (9%), Positives = 121/435 (27%), Gaps = 33/435 (7%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDS--SVRF 60
+G+ V+ L W + + +D G + + + S G V
Sbjct: 15 ATKNVIGIVVLMGLVIVPAMYAWFNIAGSWDPYGNTKNLKVAVVNSDKG-YKSDLVPVTI 73
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATI--RTQGLAGITYIELSTL 117
N VG + + A + G I +T
Sbjct: 74 N---VGS------------TVESTLRSNKQLDWQFQDQKAAVDGVYSGKYYAAIIIPTTF 118
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
K+ T+F R + S + ++ K + N+ L
Sbjct: 119 SKDMMTLFSPHAHRAKLIYYINQKSNAIVPHITDQGADTIVAQIDSTFSKTLANVALDLA 178
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
++++ + + + I + + ++ ++ + SL + +
Sbjct: 179 QSLSHYAKVGNLDSYISKAITNVDTSASGLETAAQQMKAYSQLLASSASLLISAQDLMQS 238
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++ ++ + Q + +D + S S +
Sbjct: 239 TGDEANNLADSLNSTVSSPTSLESALKTSAAAMDAALQAGQKSLDSVASQIDSLSEGV-- 296
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
+ + + + + +++ Q + N+++ + ++ + S +N
Sbjct: 297 ------SSATHQVSQETQALSTKVSSQASAYTNAANSLQKLRDSIAAAPSHGTSDSSSLN 350
Query: 358 NIS--ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+++ A + + + + +G +LQ + + + +++
Sbjct: 351 SLTEAARSRLEGALDAQISQLRSLAADHANLASLVRQVGASLQKTDSTLASQKAAMKQQI 410
Query: 416 QETVNHFDDCLNNFE 430
+T + F
Sbjct: 411 AKTQSGLQSARTQFR 425
>gi|153801114|ref|ZP_01955700.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124123347|gb|EAY42090.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 163
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L + V+ G
Sbjct: 4 TRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSSNTYRLTAEFDNIGSLKVRAPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ + L+ + I +++ I T GL G Y+ L +
Sbjct: 64 VVVGRVESIALNPKNL-LPTVTLAIDSQFNQFPENSSLQILTSGLIGEQYLSLVPGFVFE 122
Query: 122 KTIFQIATER 131
+R
Sbjct: 123 DEAMLKEGDR 132
>gi|121594929|ref|YP_986825.1| hypothetical protein Ajs_2591 [Acidovorax sp. JS42]
gi|120607009|gb|ABM42749.1| Mammalian cell entry related domain protein [Acidovorax sp. JS42]
Length = 336
Score = 55.7 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 87/281 (30%), Gaps = 4/281 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ +L + P +++ S +G+ + F+G P+GR+ + L + L
Sbjct: 46 GAGLYLLYARGAFEPTQRLVLTAEDS-EGVVVGMDMTFSGFPIGRVRRIELAETGNVRIL 104
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
R L S+ T+ + GL G T I+ + + A R TA
Sbjct: 105 IDVAQRDAHWLRTSSVFTLVS-GLVGGTTIKAYSGMLADPPLEDGAERPVLRGDATAEIP 163
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
+ + ++ + + + + A + ++ N K +
Sbjct: 164 QLMSSARQLLDNLNAMTGAESALGGAMAQVRTLTERLNAPSGALGVLMGNEADA--KKIL 221
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
TT + ++ + +V + + + +S +V
Sbjct: 222 TTLERTNQLLARIDGMAAKADRQVFGAQGDPGLVPEVRAAVVQLNGLLADARQSLTKVDA 281
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + + +E + L ++ ++ + N
Sbjct: 282 VLAEAQAVGANAREATTDLGALRAEVEGSLRKVDALVNEIN 322
>gi|319951377|ref|ZP_08025202.1| Mce family lipoprotein Mce2E [Dietzia cinnamea P4]
gi|319434974|gb|EFV90269.1| Mce family lipoprotein Mce2E [Dietzia cinnamea P4]
Length = 420
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 41/345 (11%), Positives = 86/345 (24%), Gaps = 21/345 (6%)
Query: 1 MESKNYYTSV-GLFVVSILFFSFFS--------IYWLSRSNQYDGPMAEVIIRIPGSVDG 51
M + + V + + + L + E+ I +P +V
Sbjct: 1 MSDRTRRSRVLAAGALGGIVLLTGAGCAWDGLNSLPLPGAQGNGDGAYEITIEMP-NVTT 59
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
++ +S VR N + VG I + ++ ++ + D L + A I L G +
Sbjct: 60 ITRNSPVRVNDVNVGSITAMRVE---DYTAIVTVSLNEDVRLPANAHAKIGQTSLLGSQH 116
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+EL E+ + P E T +S
Sbjct: 117 LELFPPPD--------GDEQGTLSAGDVIPLERAGVYPTTEQTLSALSVVLTDGGLAQFE 168
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
T + + T N I Q + + + D +
Sbjct: 169 TIAKEFNTALDGRELDTREVINQLEITVSGLDDQRADIIAAMEGLDRLARQIDEQNDTLA 228
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+A+ L N Q S + Q++ + +
Sbjct: 229 RALAQMPEAVSLVNDQKQQLTTALVSLGDFGNKANQIIDAGGGQDLVDNLRDITPVLEGL 288
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIE 336
+ + + + ++ I I +
Sbjct: 289 ANAGRDMTRVMSSLITFPFPQAGIDNFLRGDYANLYIHADATMPR 333
>gi|309788248|ref|ZP_07682852.1| uncharacterized protein yebT [Shigella dysenteriae 1617]
gi|308923630|gb|EFP69133.1| uncharacterized protein yebT [Shigella dysenteriae 1617]
Length = 873
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 17 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + L + K I+ D L T + T
Sbjct: 69 QGVEVGTVQDTSLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 113
Score = 40.3 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 757 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLAS 812
>gi|82777227|ref|YP_403576.1| hypothetical protein SDY_1985 [Shigella dysenteriae Sd197]
gi|81241375|gb|ABB62085.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
Length = 875
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 36/106 (33%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F+ ++ + W + Y V I S DG+ + VR+
Sbjct: 19 KRRISPFWLLPFIALMIA---GWLIW----DSYQDRGNTVTIDF-MSADGIVPGRTPVRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + L + K I+ D L T + T
Sbjct: 71 QGVEVGTVQDTSLS-DDLRKIEVKVSIKSDMKDALREETQFWLVTP 115
Score = 39.9 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 759 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLAS 814
>gi|296117257|ref|ZP_06835849.1| paraquat-inducible protein B [Gluconacetobacter hansenii ATCC
23769]
gi|295976210|gb|EFG82996.1| paraquat-inducible protein B [Gluconacetobacter hansenii ATCC
23769]
Length = 554
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/408 (11%), Positives = 113/408 (27%), Gaps = 25/408 (6%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RPDTPL 93
G ++ GS+ + + F + G ++G L + + D L
Sbjct: 169 GHTYTLMTPTLGSIG---QGAPIFFRDVVAGEVLGYTLPPGGRGPIKVQIFVHAPYDQYL 225
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T + G+ L + + + A P + + A +
Sbjct: 226 RTDTRFWNVSGVQVGLGAGGLKVKLQSLQALLSGGI-------AFAPPDARDEHLVQASS 278
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
S S+ E+ T ++ + D
Sbjct: 279 DSVFRLYDSQEEADAAGYRERIPLVTYLTSPVAGLTKGGRMTMFGIQVGMIDDVKLLVDP 338
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ + + + + + + + N +++S Q + + E T
Sbjct: 339 HTGQARVRVAMELQPERVLNDQEVPADALRSLLHMQVANGLRASVQSASFLTGESEIALT 398
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
F + + ++ + + + I DS S + ++A+ +
Sbjct: 399 FVKNARA--ATMTQEGDALVLPGQAGGMAGIMDSVSTITDKVAAMPLTQVGENLNNLLAH 456
Query: 334 TIENI-TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
I ++++ M + IS + + T + N + S
Sbjct: 457 ADARINSADMRQGLSSLRASMENLQVISHDA-----RAQMPQLLAGLDTTLKNANSLLSS 511
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
G + ++Q +V +L E + R+P ++ GR
Sbjct: 512 YGGDTD-----FQRNLQQMVVQLNEAARSLRFLSDFLTRHPSALITGR 554
Score = 43.4 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 36/483 (7%), Positives = 114/483 (23%), Gaps = 49/483 (10%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
++ Y SV V + + W + + VI + DGL++ + V+
Sbjct: 22 TRTYRFSVIWLVPLVALLIAGYLGWRGLTTRG-----PVITITFDTADGLTSGQTEVKSK 76
Query: 62 GIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ +G + + L + + + + + + + G + L T+
Sbjct: 77 SVSLGTVESIRLSDDLHHVEVGVRMTSAASRMMTSNARFWVVRPRINGASITGLETVMSG 136
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ S+ + + + I
Sbjct: 137 AYIAMDPGEPGGRHTTFFKGLESPPGVRSDQPGHTYTLMTPTLGSIGQGAPIFFRDVVAG 196
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSS----------------------------- 211
+ + +H +
Sbjct: 197 EVLGYTLPPGGRGPIKVQIFVHAPYDQYLRTDTRFWNVSGVQVGLGAGGLKVKLQSLQAL 256
Query: 212 ------DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + S D + + D Q+ + +S T
Sbjct: 257 LSGGIAFAPPDARDEHLVQASSDSVFRLYDSQEEADAAGYRERIPLVTYLTSPVAGLTKG 316
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ + L+ + + + + + + +
Sbjct: 317 GRMTMFGIQVGMIDDVKLLVDPHTGQARVRVAMELQPERVLNDQEVPADALRSLLHMQVA 376
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALK-ENNSLFKDAQRAMHTFRDTSE 384
+ +++ + +T + + M + ++
Sbjct: 377 NGLRASVQSASFLTGESEIALTFVKNARAATMTQEGDALVLPGQAGGMAGIMDSVSTITD 436
Query: 385 KINRY-IPSIGNNLQNF-----SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
K+ + +G NL N ++ D++ + L+ ++ + ++ ++
Sbjct: 437 KVAAMPLTQVGENLNNLLAHADARINSADMRQGLSSLRASMENLQVISHDARAQMPQLLA 496
Query: 439 GRE 441
G +
Sbjct: 497 GLD 499
>gi|326330425|ref|ZP_08196733.1| putative LigA [Nocardioidaceae bacterium Broad-1]
gi|325951700|gb|EGD43732.1| putative LigA [Nocardioidaceae bacterium Broad-1]
Length = 482
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/126 (16%), Positives = 39/126 (30%), Gaps = 2/126 (1%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRI 68
VG+ V+++L + ++ + L S V+ G+ VG++
Sbjct: 16 VGVIVMAVLLAFSLFAFNRAKVQTTLASGEPLSAEFRQDYK-LVPHESVVKLAGVEVGKV 74
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
G+ + K L A IR + G Y + + A
Sbjct: 75 TGVEQADGNAAKVVMKLDHGTLDKLGTQPKANIRPTLVLGGKYYVELVQGGKDGAAAEGA 134
Query: 129 TERNQR 134
T +R
Sbjct: 135 TIPAKR 140
>gi|264677705|ref|YP_003277611.1| Mammalian cell entry related protein [Comamonas testosteroni CNB-2]
gi|262208217|gb|ACY32315.1| Mammalian cell entry related protein [Comamonas testosteroni CNB-2]
Length = 324
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 83/285 (29%), Gaps = 4/285 (1%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ +L + P +++ S +G+ + F+G P+GR+ + L ++ L
Sbjct: 38 AAAYLLYARGVFEPTQRLVLTADDS-EGVIVGMDMTFSGFPIGRVRKIELAEDGSVRILV 96
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER--NQRAMITATP 141
+ L S+ T+ +GL G T I+ T + + + A
Sbjct: 97 DVTEKDAHWLRQSSVFTLV-KGLVGGTTIKAYTGMLGDAPLPPDSVRPVLSGDATAELPQ 155
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ A + +DS+ + + +M+
Sbjct: 156 IINSAKEVLANVAALTATDSALGGSLAEVRKLAERMQGQGGVLGAVLGSDEEAKKVGQML 215
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
D + ++++N +L + + S +
Sbjct: 216 ERANSLLGRMDRMVARADSQVFDANGVMPQVKATMEQLNGLLADTRKSMAKVDAVLADMQ 275
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ RE + + +++ L S + + + +
Sbjct: 276 VVGSNAREASTDLGALRAEVESNLLRLESVLNDLQRKWPFSHKPE 320
>gi|238798130|ref|ZP_04641617.1| hypothetical protein ymoll0001_17980 [Yersinia mollaretii ATCC
43969]
gi|238717984|gb|EEQ09813.1| hypothetical protein ymoll0001_17980 [Yersinia mollaretii ATCC
43969]
Length = 851
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + + +Y N + EV I S G+ + +R+ G+ VG + + L
Sbjct: 3 FIALLIASWLVY-----NNWQERGTEVTIDF-QSAAGIVAGRTPIRYQGVEVGMVQSISL 56
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
D + + A I+ D L T + T
Sbjct: 57 D-DDLRNIKVTASIKNDMEDSLRDGTQFWLVTP 88
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 17/57 (29%), Gaps = 3/57 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
L + V F G+ VG + G L I + ++ + +
Sbjct: 730 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQQLVRQNSVFWLAS 785
Score = 39.9 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 26/89 (29%), Gaps = 1/89 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
+ L++ S V + IPVG++ + + + R + T +
Sbjct: 144 DLGSLNSGSLVYYRKIPVGKVYDYNIAPDNNGVVIDVLIDRRFAKLVKNDTRFWNVSGFK 203
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRA 135
+ S + + A +
Sbjct: 204 GDFSLSGASVQMESLAALVNGAIAFDSPQ 232
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +R+ GI +G++ L L E
Sbjct: 616 DASKLAAGMPIRYLGINIGQVESLKLIPERNEV 648
>gi|315442439|ref|YP_004075318.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260742|gb|ADT97483.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 372
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 32/95 (33%), Gaps = 4/95 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V + S GL ++V G+PVG++ + + + + + +
Sbjct: 34 DTISVTAQF-DSAAGLYEGNTVAVLGMPVGKVTTITP---KGGYVEVEFTVDKNVKVPAD 89
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
A + + IEL+ ++ + T
Sbjct: 90 VQAATISNSILTDRQIELTPPYRDGPVLQNHDTIG 124
>gi|222110420|ref|YP_002552684.1| mammalian cell entry related domain-containing protein [Acidovorax
ebreus TPSY]
gi|221729864|gb|ACM32684.1| Mammalian cell entry related domain protein [Acidovorax ebreus
TPSY]
Length = 336
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 87/281 (30%), Gaps = 4/281 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ +L + P +++ S +G+ + F+G P+GR+ + L + L
Sbjct: 46 GAGLYLLYARGAFEPTQRLVLTAEDS-EGVVVGMDMTFSGFPIGRVRRIELAETGNVRIL 104
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
R L S+ T+ + GL G T I+ + + A R TA
Sbjct: 105 IDVAQRDAHWLRTSSVFTLVS-GLVGGTTIKAYSGMLADPPLEDGAERPVLRGDATAEIP 163
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
+ + ++ + + + + A + ++ N K +
Sbjct: 164 QLMSSARQLLDNLNAMTGAESALGGAMAQVRTLTERLNAPGGALGVLMGNETDA--KKIL 221
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
TT + ++ + +V + + + +S +V
Sbjct: 222 TTLERTNQLLARIDGMAAKADRQVFGAGGDPGLVPEVRAAVVQLNGLLADARQSLTKVDA 281
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + + +E + L ++ ++ + N
Sbjct: 282 VLAEAQAVGANAREATTDLGALRAEVEGSLRKVDALVNEIN 322
>gi|189424913|ref|YP_001952090.1| hypothetical protein Glov_1854 [Geobacter lovleyi SZ]
gi|189421172|gb|ACD95570.1| Mammalian cell entry related domain protein [Geobacter lovleyi SZ]
Length = 318
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/123 (14%), Positives = 46/123 (37%), Gaps = 1/123 (0%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GLF + L + + P + + + G + V+ +G +GRI
Sbjct: 15 KIGLFTLLALAGVALVVLLVGVQKDLFSPKYTLNVTVDR-GTGFTKGMPVKLSGFRIGRI 73
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ L+++ + + + +T + +GL G + +E++ +K +
Sbjct: 74 TDMALNEQAMVEISIEIAKKYSKWIRSDSTVKLVKEGLVGDSIVEVAVGSLDKPELKPGE 133
Query: 129 TER 131
+
Sbjct: 134 SIT 136
>gi|262202879|ref|YP_003274087.1| mammalian cell entry related domain-containing protein [Gordonia
bronchialis DSM 43247]
gi|262086226|gb|ACY22194.1| Mammalian cell entry related domain protein [Gordonia bronchialis
DSM 43247]
Length = 436
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 39/101 (38%), Gaps = 6/101 (5%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V +L + + + R M V ++ DGL + + VR+NG+ VG + + L
Sbjct: 20 VAFLLVMAIIAALLIMRYQGVFSSMVPVTAKMHDVGDGLISGTDVRYNGLIVGSVKSIGL 79
Query: 74 DQEYPNHS----LAKALIRPDTP--LYPSTTATIRTQGLAG 108
D S + + PD + + TA L G
Sbjct: 80 DDSDATGSAQLKIVDIDLVPDQADGIPANVTARTVPSNLFG 120
>gi|139438305|ref|ZP_01771858.1| Hypothetical protein COLAER_00847 [Collinsella aerofaciens ATCC
25986]
gi|133776502|gb|EBA40322.1| Hypothetical protein COLAER_00847 [Collinsella aerofaciens ATCC
25986]
Length = 729
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 60/483 (12%), Positives = 146/483 (30%), Gaps = 53/483 (10%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDS--SVRFNGIP 64
+GL VV L W + + +D G + I + + +G V +
Sbjct: 19 VIGLVVVMGLIIVPCLYAWFNIAGSWDPYGNTGNLKIAVVNTDEG-YESDLIPVE---VN 74
Query: 65 VGR-IVGLFLDQEYPNHSLAKALIRPDTP------------LYPSTTATIRTQGLAGITY 111
VG + L + + + +A + T + +
Sbjct: 75 VGENVTA-TLRGNESFDWVVLNNREKAIEGVKSGAYYAAVVIPKTFSADMMTLFSTDVKH 133
Query: 112 IELSTLRKEKKT-IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
++ +K I QI TE+ A+ + I++ + ++
Sbjct: 134 ADIEFYENQKANAIAQIVTEKGSSAVQSQVNETFTETITSIGLKTVSSLLDYMSTDQVSN 193
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
I +T +++ + V A+ S + T+ +S T+ + L +
Sbjct: 194 FIANLSSTLGDSVQDLQDVQASATSLAGILSSTSDSLTSASGMLQQTGTVDESTKQLMEH 253
Query: 231 IKAIDLQKVNQILENIQV-----------SSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
K+ + N + + V T +
Sbjct: 254 AKSGMSDSKEALKAANDAINAAIDGSAGSFDNVSAELAKAFDAANQHVDLTVSQLNDAAA 313
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ D + A + +++S +++ I + + +
Sbjct: 314 ALNTRADDIDATADQLRGFAEQVSDEKLQESLKSVATSLGRIAVEYRN---NAKDLTATA 370
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSL-------------FKDAQRAMHTFRDTSEKI 386
+L+DS + ++++ A + K+ ++ + D+ + I
Sbjct: 371 KSLSDSMAEVNSTRAEVDQAIADAKAGISGAKSDYDSTFSVKAKELKKTVSGILDSLDGI 430
Query: 387 NRYIPSIGNNLQNFSQS---GLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ + S + L + S S GL+ LV K + + D ++ F+ + +
Sbjct: 431 SGDLDSAVDGLTDASGSLAKGLSKAAKLVNKASDQLGEASDKISAFKDELDGALMSDDLA 490
Query: 444 SVK 446
++K
Sbjct: 491 TIK 493
>gi|21220885|ref|NP_626664.1| secreted protein [Streptomyces coelicolor A3(2)]
gi|256787960|ref|ZP_05526391.1| secreted protein [Streptomyces lividans TK24]
gi|289771847|ref|ZP_06531225.1| secreted protein [Streptomyces lividans TK24]
gi|10798662|emb|CAC12798.1| putative secreted protein [Streptomyces coelicolor A3(2)]
gi|289702046|gb|EFD69475.1| secreted protein [Streptomyces lividans TK24]
Length = 418
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/129 (10%), Positives = 40/129 (31%), Gaps = 8/129 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
G+ V + + + ++ V++ + + + + V+ G+ VG +
Sbjct: 13 LAGVVFVLVPALLIWLAV--AVYDKKFTDSDPVVVETGSAGNQMHPGAEVKLRGVVVGEV 70
Query: 69 VGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIF 125
+ + + ++P + A + L G ++ + + +
Sbjct: 71 RAIDATGDG---ARLTLAMKPGALDDVPSDVRAQMLPTTLFGERFVALVPPANPSPEPLA 127
Query: 126 QIATERNQR 134
A R
Sbjct: 128 AGAVVPQDR 136
>gi|83748954|ref|ZP_00945963.1| Paraquat-inducible protein B [Ralstonia solanacearum UW551]
gi|207744181|ref|YP_002260573.1| hypothetical protein RSIPO_02368 [Ralstonia solanacearum IPO1609]
gi|83724377|gb|EAP71546.1| Paraquat-inducible protein B [Ralstonia solanacearum UW551]
gi|206595586|emb|CAQ62513.1| conserved hypothetical protein [Ralstonia solanacearum IPO1609]
Length = 558
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/398 (11%), Positives = 110/398 (27%), Gaps = 37/398 (9%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
S+ + T + V + I VG++ G LD++ + + P + + + +
Sbjct: 191 SLGSVETGTPVYYRHIEVGQVTGTALDKDGAG---VTVDVFVEAPYHRYVGRDTQWRHAS 247
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
G+ + + FQ I PS A +
Sbjct: 248 GLGLRLDAAGLRLNAESFQAMLLGG----IAFQPSSGQPVGETAPD------------GT 291
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ TT + V+ + + V N +
Sbjct: 292 VFSLQSGDFGTTDGPDGKPAVVVMQFDQSLRGLSVGAAVDFRGVQFGEVTNVGVEFDPKT 351
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLS 286
+ + L L +S+ + ++ V + + G + + L
Sbjct: 352 RTFVMPVTLSLYPDRLGQAFRASSEYGDTAAAKALLRRLVAQGLRGQLRTGNLLTNQLYV 411
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ L + + +++ ++ + + + ++ + S+L S
Sbjct: 412 ALDMFPNAPPVQLDLSRTPIALPTIPNTLDDLQAQIADLARTLDRVP-LDQLGSHLGQSL 470
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
L + + L A+ + T R + + S
Sbjct: 471 DHARRLFTLADA--------QLAPQARTMLATARQAFDTAQAAVQS--------PLLLPT 514
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ +L + D + ++P+ +VWG +
Sbjct: 515 ELSQAREQLAHALRALDALTDTIAQHPESLVWGSTADT 552
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG--LFLDQEYPNHS-LAK 84
++ DG A V+++ S+ GLS ++V F G+ G + + D +
Sbjct: 300 FGTTDGPDGKPAVVVMQFDQSLRGLSVGAAVDFRGVQFGEVTNVGVEFDPKTRTFVMPVT 359
Query: 85 ALIRPD 90
+ PD
Sbjct: 360 LSLYPD 365
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 34/420 (8%), Positives = 100/420 (23%), Gaps = 23/420 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ S + + Q G E+ + +G+ + V++N + +G + + L
Sbjct: 49 LIAALVSIGLV-----AGQLRGHGPEITLSFLD-AEGIEPGKTPVKYNDVGIGTVTAVRL 102
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIATE 130
+ + T I G+ G + + + E
Sbjct: 103 STDLSRVFVTVQLTQEAADFATKGTRFWIVRPRAGMRGASGLGTLLSGTYIGADRSGSRE 162
Query: 131 RNQRAMITATPSGINYFISNAENTSKKI--------SDSSRHIQKIIENIEKPLTTTIAN 182
+ +P +++ A + ++ + L A
Sbjct: 163 PETQFTGLESPPVVSFRQKGARFVLHGPSLGSVETGTPVYYRHIEVGQVTGTALDKDGAG 222
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ V A ++ + + + + Q
Sbjct: 223 VTVDVFVEAPYHRYVGRDTQWRHASGLGLRLDAAGLRLNAESFQAMLLGGIAFQPSSGQP 282
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ F S T + + Q + L + + +
Sbjct: 283 VGETAPDGTVFSLQSGDFGTTDGPDGKPAVVVMQFDQSLRGL--SVGAAVDFRGVQFGEV 340
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ ++ + + + + + L+++ +
Sbjct: 341 TNVGVEFDPKTRTFVMPVTLSLYPDRLGQAFRASSEYGDTAAAKALLRRLVAQ--GLRGQ 398
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
+L + + + + L + L+D+Q + L T++
Sbjct: 399 LRTGNLLTNQLYVALDMFPNAPPVQLDLSRTPIALPTI-PNTLDDLQAQIADLARTLDRV 457
>gi|299530298|ref|ZP_07043723.1| Mammalian cell entry related protein [Comamonas testosteroni S44]
gi|298721669|gb|EFI62601.1| Mammalian cell entry related protein [Comamonas testosteroni S44]
Length = 329
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 83/285 (29%), Gaps = 4/285 (1%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ +L + P +++ S +G+ + F+G P+GR+ + L ++ L
Sbjct: 43 AAAYLLYARGVFEPTQRLVLTADDS-EGVIVGMDMTFSGFPIGRVRKIELAEDGSVRILV 101
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER--NQRAMITATP 141
+ L S+ T+ +GL G T I+ T + + + A
Sbjct: 102 DVTEKDAHWLRQSSVFTLV-KGLVGGTTIKAYTGMLGDAPLPPDSVRPVLSGDATAELPQ 160
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ A + +DS+ + + +M+
Sbjct: 161 IINSAKEVLANVAALTATDSALGGSLAEVRKLAERMQGQGGVLGAVLGSDEEAKKVGQML 220
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
D + ++++N +L + + S +
Sbjct: 221 ERANSLLGRMDRMVARADSQVFDANGVMPQVKATMEQLNGLLADTRKSMAKVDAVLADMQ 280
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ RE + + +++ L S + + + +
Sbjct: 281 VVGSNAREASTDLGALRAEVESNLLRLESVLNDLQRKWPFSHKPE 325
>gi|296166533|ref|ZP_06848964.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898145|gb|EFG77720.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 385
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/280 (9%), Positives = 75/280 (26%), Gaps = 31/280 (11%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVD------GL--STDSSVRFNGIPV 65
V++ L +F I +LS +V GL + V++ GI +
Sbjct: 2 VLAGLMVAFAVITYLS---------YTAAFASIDNVTVSAPRAGLVMEKGAKVKYRGIQI 52
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
G++ + + + I D + + T I + G +E +
Sbjct: 53 GKVEAIEYSDD---QARLTLGINSDDMHFIPSNATVHIGGNTIFGAKSVEFLPPQY---- 105
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + R T S + ++ + + ++ + + +
Sbjct: 106 ----PSPTSLRPDAHVTASAVQLEVNTLFQSLMDLLHKIDPVE-LNGTLSALSEGLRGHG 160
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ +L+ + + I + ++
Sbjct: 161 DDFGGILSGLNTLTRQANPKLPALQEDFRKAAVATNIYADAAPNLNTVLDNLPTISKIVV 220
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ ++ + + N + Q F + ++
Sbjct: 221 DQQNNLNDTLLATIGLANNAYETLAPAEQNFIDAINRLRA 260
>gi|213585788|ref|ZP_03367614.1| hypothetical protein SentesTyph_32772 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-0664]
Length = 165
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 30 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 83
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 84 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 115
>gi|169628102|ref|YP_001701751.1| putative MCE family protein [Mycobacterium abscessus ATCC 19977]
gi|169240069|emb|CAM61097.1| Putative MCE family protein [Mycobacterium abscessus]
Length = 375
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 31/95 (32%), Gaps = 4/95 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ + + GL + V G+PVG+I + + + + D +
Sbjct: 38 DHITLTAQF-DNASGLYESNVVAVLGMPVGKITKITPQ---SGYVDVEFTVDKDVKVPVD 93
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
A + + +EL+ + T+ T
Sbjct: 94 VQAVTLSTSILTDRQVELTPPYRGGPTLQDGDTIG 128
>gi|207721716|ref|YP_002252155.1| hypothetical protein RSMK02012 [Ralstonia solanacearum MolK2]
gi|206586878|emb|CAQ17463.1| conserved hypothetical protein [Ralstonia solanacearum MolK2]
Length = 558
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 44/398 (11%), Positives = 110/398 (27%), Gaps = 37/398 (9%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
S+ + T + V + I VG++ G LD++ + + P + + + +
Sbjct: 191 SLGSVETGTPVYYRHIEVGQVTGTALDKDGAG---VTVDVFVEAPYHRYVGRDTQWRHAS 247
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
G+ + + FQ I PS A +
Sbjct: 248 GLGLRLDAAGLRLNAESFQAMLLGG----IAFQPSSGQPVGETAPD------------GT 291
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ TT + V+ + + V N +
Sbjct: 292 VFSLQSGDFGTTDGPDGKPAVVVMQFDQSLRGLSVGAAVDFRGVQFGEVTNVGVEFDPKT 351
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLS 286
+ + L L +S+ + ++ V + + G + + L
Sbjct: 352 RTFVMPVTLSLYPDRLGQAFRASSEYGDTAAAKALLRKLVAQGLRGQLRTGNLLTNQLYV 411
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ L + + +++ ++ + + + ++ + S+L S
Sbjct: 412 ALDMFPNAPPVQLDLNRTPIALPTIPNTLDDLQAQIADLARTLDRVP-LDQLGSHLGQSL 470
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
L + + L A+ + T R + + S
Sbjct: 471 DHARRLFTLADA--------QLAPQARTMLATARQAFDTAQAAVQS--------PLLLPT 514
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
++ +L + D + ++P+ +VWG +
Sbjct: 515 ELSQAREQLAHALRALDALTDTIAQHPESLVWGSTADT 552
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG--LFLDQEYPNHS-LAK 84
++ DG A V+++ S+ GLS ++V F G+ G + + D +
Sbjct: 300 FGTTDGPDGKPAVVVMQFDQSLRGLSVGAAVDFRGVQFGEVTNVGVEFDPKTRTFVMPVT 359
Query: 85 ALIRPD 90
+ PD
Sbjct: 360 LSLYPD 365
>gi|108798494|ref|YP_638691.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867595|ref|YP_937547.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108768913|gb|ABG07635.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693684|gb|ABL90757.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 473
Score = 55.3 bits (130), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 44/124 (35%), Gaps = 8/124 (6%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
+ LF + + + +V + + GL + + V+ G+ VGR+ G+
Sbjct: 17 AALFGTVIGLVVVCSLTFAGAFRRDVPVMLTSDRSGLVMESGAKVKMRGVEVGRVAGI-- 74
Query: 74 DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATE 130
K + PD + + A I + G Y++ + + + A
Sbjct: 75 -AGGGRTVGLKLELFPDQISRIPANVEAEISSTTAFGAKYVDLIYPDHPSPQRLNAGAVL 133
Query: 131 RNQR 134
+++
Sbjct: 134 KSRN 137
>gi|91793072|ref|YP_562723.1| hypothetical protein Sden_1716 [Shewanella denitrificans OS217]
gi|91715074|gb|ABE55000.1| Mammalian cell entry related [Shewanella denitrificans OS217]
Length = 883
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 5/92 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + WL E+ I P S G+ + V++ G+ VG++ + +
Sbjct: 20 LLPIVALILGG-WLG-VKSIRESGIEIQIHFP-SATGIDVGKTLVKYQGLTVGKVSDISI 76
Query: 74 DQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
D + R D L T + T
Sbjct: 77 DDDLKGVNVKVLMDYRADPFLRKDTLFWLVTP 108
>gi|332174312|gb|AEE23566.1| Mammalian cell entry related domain protein [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 553
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 40/403 (9%), Positives = 107/403 (26%), Gaps = 36/403 (8%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
V + G+ VG ++ + + + Y
Sbjct: 171 KEGDPVIYKGLKVGEFESIYFNFDER---------------------VVYYNTFIQAPYH 209
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+L T + + + + S + + + +
Sbjct: 210 KLITTNTKFWNTSGVEMDIGANGFKVKSSSIETLITNGVAFGVPEGMPQGERVNERSYFS 269
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ A E A + +D + ++ + ++ K K
Sbjct: 270 IHESYESAA--EERYKESAKFVILVDDTVRGLRIGAPVEYRGIKVGKVLEINPPNGKQHK 327
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+D ++ IQ + + ++ + + +LL+
Sbjct: 328 WLDSGVAIPVVIGIQPGRVEQTDDAAGIEFINQQIKIWVENGFRASLQTGNLLTGALFVN 387
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQ-KIISTINTIENITSNLNDSSQKFAE 351
+ +A + + + + I ++ + ++Q A+
Sbjct: 388 LEQYPNAPVAQMEQFQQYSVIPSISNEFSQITEKVSAILDNINDMDLVQMSSAANQMMAD 447
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTF--RDTSEKINRYIPSIGNNLQNFS--QSGLND 407
+ + N++ NS D + + S K+ + I + FS N+
Sbjct: 448 ISASANSM------NSTADDFAETLKEMDEQQVSVKLAAALSGIAELTRGFSSGSKTNNE 501
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
I + + LQ + L + P +++ +K +P
Sbjct: 502 IYDTLETLQHRLRELQPLLLELNQAPNSLIF--DKSPKPYLQP 542
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/290 (13%), Positives = 91/290 (31%), Gaps = 26/290 (8%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHSLAKALIR 88
A+ +I + +V GL + V + GI VG+++ + + I+
Sbjct: 283 KESAKFVILVDDTVRGLRIGAPVEYRGIKVGKVLEINPPNGKQHKWLDSGVAIPVVIGIQ 342
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
P A I +I E RA +
Sbjct: 343 PGRVEQTDDAAGIE-----------------FINQQIKIWVENGFRASLQTGNLLTGALF 385
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
N E ++ Q ++ ++ + I + + +NI+ +D + ++
Sbjct: 386 VNLEQYPNA--PVAQMEQFQQYSVIPSISNEFSQITEKVSAILDNINDMDLVQMSSAANQ 443
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+D + N++ + +K +D Q+V+ L + T +++
Sbjct: 444 MMADISASANSMNSTADDFAETLKEMDEQQVSVKLAAALSGIAELTRGFSSGSKTNNEIY 503
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
+T +T Q +++ LL + + S + S +
Sbjct: 504 DTLETLQHRLRELQPLLLELNQAPNSLIFDKSPKPYLQPGSQPNTQQGNR 553
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/449 (8%), Positives = 107/449 (23%), Gaps = 39/449 (8%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE-Y 77
+ W+ +Q+ + I + GL + ++ + + VG + + L ++
Sbjct: 25 IAVCMGGWM-FYHQWSNQGPLISIVF-ENASGLEAGKTKIKMHNVDVGEVKSIELTEDLQ 82
Query: 78 PNHSLAKALIRPDTPLYPSTTAT-----IRTQGLAGITYIELSTLRKEKKTIF------- 125
A+ + L +T I G++G+ + T +
Sbjct: 83 KVLVTARMSANSEGLLRENTEFWSVNPRISLNGISGLNTLVSGTYINMSTNLEGRSSRDF 142
Query: 126 -----QIATERNQRAMITATPSGINYFISNAE----------NTSKKISDSSRHIQKIIE 170
T + S + + + +
Sbjct: 143 VALSAPPITPSGTPGLHVTLNSNAEFAFKEGDPVIYKGLKVGEFESIYFNFDERVVYYNT 202
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
I+ P I + + + + + + + +++
Sbjct: 203 FIQAPYHKLITTNTKFWNTSGVEMDIGANGFKVKSSSIETLITNGVAFGVPEGMPQGERV 262
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + K V +TV +R + L + +
Sbjct: 263 NERSYFSIHESYESAAEERYKESAKFVILVDDTVRGLRIGAPVEYRGIKVGKVLEINPPN 322
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ K + + + I ++L +
Sbjct: 323 GKQHKWLDSGVAIPVVIGIQPGRVEQTDDAAGIEFINQQIKIWVENGFRASLQTGNLLTG 382
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN--------FSQ 402
L + + + + +I + +I +N+ + +
Sbjct: 383 ALFVNLEQYPNAPVAQMEQFQQYSVIPSISNEFSQITEKVSAILDNINDMDLVQMSSAAN 442
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ DI + T + F + L +
Sbjct: 443 QMMADISASANSMNSTADDFAETLKEMDE 471
>gi|269128541|ref|YP_003301911.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
gi|268313499|gb|ACY99873.1| virulence factor Mce family protein [Thermomonospora curvata DSM
43183]
Length = 443
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 49/136 (36%), Gaps = 8/136 (5%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ Y GL ++ ++ ++ N+ P V +R + L S V+ G+
Sbjct: 10 RARYRIYGLAMICVIALLLVLAV--AQFNKALTPTVNVKVRTQRAGLQLLPRSDVKVRGL 67
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKE- 120
VG + + ++ + + PD + + TA + + L G Y++L
Sbjct: 68 IVGEVRATRATADG---AVLELALDPDKAKLIPSNVTARLLPKTLFGEKYVDLQIPADRS 124
Query: 121 KKTIFQIATERNQRAM 136
+ A + +
Sbjct: 125 STPLRSGAVIQQDTSQ 140
>gi|300783697|ref|YP_003763988.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793211|gb|ADJ43586.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 362
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 36/314 (11%), Positives = 95/314 (30%), Gaps = 14/314 (4%)
Query: 8 TSVGLFVVSILFFSFFSIYW---LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+VG ++ F + L V ++ V L ++V+ +P
Sbjct: 5 FAVGCLTLAGCSSGEFKGVYDLPLPGGADVGDHPYSVTVQF-ADVLDLVPQAAVKVGDVP 63
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VGR+ + L + + D L + A +R L G ++EL+ + KT
Sbjct: 64 VGRVREVRLGGDGWTAETV-LEVNGDVVLPANAVARLRQSSLLGEKFVELAPPDGDTKTA 122
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKK---------ISDSSRHIQKIIENIEKP 175
+ A E I +++ + ++
Sbjct: 123 DAKNAGTGRLANGATITLDRTNRNPEFEEIFGALSLLLNGGGIGQLQTINRELSKVMDGN 182
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + ++T++ + +H + S + + +
Sbjct: 183 EEQIRSFLSGVNTLVTDLDAHRSNITEALDGLNRLSATLANRHEQVSGALTDLTPGLQTL 242
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ Q++ +Q ++D V + D+ + + ++ + ++
Sbjct: 243 TDQRTQLVSMLQSLDRLGTVATDVVDRSRADMVADLRALAPILGQLAAAGENLPQSLQML 302
Query: 296 ETSAFLENIADSTS 309
T F +++ ++
Sbjct: 303 PTFPFPDSVLNTVK 316
>gi|54022504|ref|YP_116746.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014012|dbj|BAD55382.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 396
Score = 54.9 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 37/108 (34%), Gaps = 7/108 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
GL +V L + V G V L D+ V+ G+ +G++
Sbjct: 15 LAGLAMVLALVAIVAVALTMFVGGFTRTATVLVQAPRSGLV--LDPDAKVKVRGVEIGKV 72
Query: 69 VGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIEL 114
+ D+ + + + P+ + + IR+ + G Y+
Sbjct: 73 AAVRQDENG---ATLELALDPEKLKLVPANAGVDIRSTTVFGAKYVNF 117
>gi|297182149|gb|ADI18321.1| paraquat-inducible protein b [uncultured Rhodobacterales bacterium
HF4000_03E16]
Length = 612
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 42/460 (9%), Positives = 132/460 (28%), Gaps = 51/460 (11%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-------- 82
N D V + S + + + + + GIPVG + L + +
Sbjct: 154 INNPDEDGTRVRLSARDS-NSIIAGAPILYKGIPVGTVEAPDLAEGGEQVIITGFVRAPY 212
Query: 83 ---------------AKALIR-PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ L S+ A++ G++ T++ +
Sbjct: 213 DEIITSDTRFWNISGVSVSLDTSGVSLNFSSLASLVQGGISFDTFVPGGDAVADGTEFPL 272
Query: 127 IATERNQRAMITATPSGINYFISNAENTS-----------KKISDSSRHIQKIIENIEKP 175
A E R+ + P+ + + + + E+
Sbjct: 273 YADESAARSSLLNDPTAERLRALAVFDGTVGGLAEGATVRFRGVPVGEVDNVAMVAGERD 332
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ ++ + + + + + + ++ +
Sbjct: 333 GRKVVRMRAMLAIIPSRLGLSNEDGVEEALDLLSVYVEEGLRVRLATASLLSSDLVVDLI 392
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI--DHLLSDFSSKMK 293
+++ E V + + + V D+ T + + + + +L+ +
Sbjct: 393 ELPIDEEGEAEIVMTEMGIPQLPTIEAEVSDLNATAEGVFQRINNLPIEEVLASVQGLID 452
Query: 294 SKETSAFLENIADSTSNMRSSISA----IREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ ++I + ++++ E+T ++ + + + + ++
Sbjct: 453 NASALVASDDIRAVAPGINATLADLRALQPEVTSTLEEFRTITPELTDTLDEATATLEEV 512
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN---------F 400
+++ + A + N++F A A + ++ + +
Sbjct: 513 RLIVAGLRESGATENVNNVFASAANAADAVEAAAGELPKLTARLTTLATRTEKVIESYGD 572
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
+ +N + +R + E + +RNP ++ GR
Sbjct: 573 NSRLINGALSTLRDVSEAADALRSLARTIQRNPNSLIIGR 612
Score = 40.7 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 42/430 (9%), Positives = 100/430 (23%), Gaps = 23/430 (5%)
Query: 13 FVVSILFFSFFSIYWLS-RSNQYDGPMAEVIIRIPGSVDGLS-TDSSVRFNGIPVGRIVG 70
F V L L Y + I S G++ + +R+ + VG +
Sbjct: 19 FSVVWLVPILALAVSLGIAYQTYAERGVLIEIAF-DSASGIAAEKTELRYRDVTVGLVED 77
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ + +A I + Y A +
Sbjct: 78 VRFS-DDLGEVIAAVRIDRNLAPYLDENAEFWVVRPEISAQGITGLNTVLSGVYIVGQWD 136
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
A T N I+N + ++ S+R II +
Sbjct: 137 STAGAARTRFDGLENAPINNPDEDGTRVRLSARDSNSIIAGAPILYKGIPVGTVEAPDLA 196
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNT-----FNTITDLITSLDKMIKAIDLQKVNQILEN 245
I + + D L + +
Sbjct: 197 EGGEQVIITGFVRAPYDEIITSDTRFWNISGVSVSLDTSGVSLNFSSLASLVQGGISFDT 256
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL---LSDFSSKMKSKETSAFLE 302
+ ++ + ++ +++ L +
Sbjct: 257 FVPGGDAVADGTEFPLYADESAARSSLLNDPTAERLRALAVFDGTVGGLAEGATVRFRGV 316
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ + + + + + +++ I + +++ + ++ +S
Sbjct: 317 PVGEVDNVAMVAGERDGRKVVRMRAMLAIIPSRLGLSNE--------DGVEEALDLLSVY 368
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN---LQNFSQSGLNDIQNLVRKLQETV 419
E + A ++ + + I I G + L I+ V L T
Sbjct: 369 VEEGLRVRLATASLLSSDLVVDLIELPIDEEGEAEIVMTEMGIPQLPTIEAEVSDLNATA 428
Query: 420 NHFDDCLNNF 429
+NN
Sbjct: 429 EGVFQRINNL 438
>gi|108801576|ref|YP_641773.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119870730|ref|YP_940682.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771995|gb|ABG10717.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119696819|gb|ABL93892.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 395
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/317 (10%), Positives = 88/317 (27%), Gaps = 15/317 (4%)
Query: 1 MESKNYYTSVGL-FVVSILFFSFFSIYWLSRSNQY--------DGPMAEVIIRIPGSVDG 51
M + + VG +V + N ++ +++P
Sbjct: 1 MTLRRNVSRVGYRSIVLGSGALLLAGCQFGGLNSLNMPGTAGHGAGSYKITVQLPDVAT- 59
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ--EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
L +S V + + VG + G+ Q + ++ + + + L ++TA + L G
Sbjct: 60 LPQNSPVMIDDVTVGSVSGINAVQRSDGTFYAAVELALDGNVNLPENSTAKVAQTSLLGS 119
Query: 110 TYIE--LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+IE E + + + +R T + + +
Sbjct: 120 QHIELAPPQGEPEIGKLREGSQIPLERTGRYPTTEEV-LSSLGVVVNKGNLGALQDITDE 178
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + ++ + + ++ + +
Sbjct: 179 AYAAVAGRQDSFTDLVPRLAELTTSLDRQTGDIIAAAEGLNRFAGILARSRDSLGRTLDT 238
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + I++ + + S + T D + V + ++ + D
Sbjct: 239 LPAALDVLNKNRANIVDAFAALRSFAIVGSRILSQTKDDFAADFKDLYPVIKSLNDNVDD 298
Query: 288 FSSKMKSKETSAFLENI 304
F ++ T F
Sbjct: 299 FIKSLEFLPTFPFHYTY 315
>gi|308051139|ref|YP_003914705.1| hypothetical protein Fbal_3433 [Ferrimonas balearica DSM 9799]
gi|307633329|gb|ADN77631.1| Mammalian cell entry related domain protein [Ferrimonas balearica
DSM 9799]
Length = 155
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 4/135 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ +VG F+++ L I+ ++ + + ++ GL S V+ G
Sbjct: 2 TRKIELAVGAFLLAGLAAFLVLIFKVADIDPRGNGATYTLTAHFDNIGGLKVRSPVKVGG 61
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR--K 119
+ VGR+ G+ LD E + +++ +I T GL G YI LS +
Sbjct: 62 VVVGRVSGIALDPELLTPV-VSLAMDARYDQFPETSSLSILTSGLLGEQYIGLSPGFMDE 120
Query: 120 EKKTIFQIATERNQR 134
+ + + R
Sbjct: 121 DISLLGDGDLIEDTR 135
>gi|226364207|ref|YP_002781989.1| Mce family protein [Rhodococcus opacus B4]
gi|226242696|dbj|BAH53044.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 391
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/285 (9%), Positives = 80/285 (28%), Gaps = 11/285 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSV 58
M + V+ + + + L+ N V + GL D+ V
Sbjct: 1 MTDSGGKKKLAALVLVVGLLAIIGV-SLAMFNGTFSETTPVTV--TSDRSGLVMEPDAKV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY-IELS 115
+ G+ VGR+ + + + K + PD + + T I++ + G Y +
Sbjct: 58 KLLGVEVGRVGSIEHVTDG---AELKLAMYPDMMSLIPSNATVEIKSTTVFGAKYVNFVM 114
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + + A+ +K++ + I + +
Sbjct: 115 PENPSPTPLQAGDVIASDNVTVEFNTVFQHLSDVLAQVQPEKLNATLGAISSALHGRGEE 174
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
L + ++ + ++ + + + + +
Sbjct: 175 LGALLEQSDSYLAEMNPSLPQLQEDLAKAAQVTDVYADTAPDLLRVLDNATATSGTVVDE 234
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
++ +L N+ ++ + + ++ +
Sbjct: 235 QDNLDAVLLNVTGLADTANTVLTENEQNLDSALGLLLPTTDLLAE 279
>gi|218710668|ref|YP_002418289.1| ABC transporter type A secreted protein [Vibrio splendidus LGP32]
gi|218323687|emb|CAV20018.1| ABC transporter: type A secreted protein (SSA) [Vibrio splendidus
LGP32]
Length = 163
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ G FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKLELWAGTFVIAGICAILIMIFQVADVKGLGSNHTYNLKATFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ VGR+ + LD E + I +++A I T GL G YI L
Sbjct: 64 VVVGRVQSIELDTESYLPV-VELSIDAKYSQFPDTSSAQILTSGLIGEQYISLVPGF 119
>gi|157368613|ref|YP_001476602.1| paraquat-inducible protein B [Serratia proteamaculans 568]
gi|157320377|gb|ABV39474.1| Mammalian cell entry related domain protein [Serratia
proteamaculans 568]
Length = 547
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 86/266 (32%), Gaps = 14/266 (5%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
++ SV GL + V F G+ +G + + +E H ++ D +
Sbjct: 290 YLMFFSDSVRGLQPGAPVEFRGMRLGSVAQVPFFKEGIEH-----RVKNDYRIP--VLIH 342
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
I + L + + E + + + + + + +
Sbjct: 343 IEPERLKAL-------GKDFDFDSSLKDAESRGIRASLKSANLLTGSLYIDLDFNPQDKP 395
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + +A I+ + I+ I + T ++S+ T +
Sbjct: 396 WDGPHELFGYPLIPTTSGGLAQIQQKLVQTLDKINAIPLTPMINEATKTLAESQRTMKST 455
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ SL+ +I + +++ + Q ++ N +K + + Q +V ++
Sbjct: 456 QKTMKSLNDIISSKEVKALPQEMQKTLQELNRSMKGFQPGSPAYNKMVGDMQRLDQVLRE 515
Query: 281 IDHLLSDFSSKMKSKETSAFLENIAD 306
+ +L + K + A N
Sbjct: 516 LQPVLHTLNEKSNALVFEAAASNDPQ 541
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 39/454 (8%), Positives = 110/454 (24%), Gaps = 41/454 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEV--------------IIRIPGSVDG-LSTD 55
G+ + L + + ++ I + G L+
Sbjct: 116 GVSGLGTLLSGAYIELQPGTKGKDGKDTYQLLDAPPLASPDAKGLRIVLDSEKSGQLNAG 175
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
V F+ VG + + D + + + P T+ +R +G+T+ +
Sbjct: 176 DPVLFHNYRVGSVETSYFDPKQRA---MRYQLFISAPYDQLVTSNVRFWKDSGVTFDMSA 232
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ + + AE + + I +++
Sbjct: 233 QGMRVEMGSLATLFSGGVSFDVPHGWDRGEKAKEKAEYRLF------DNQRSIQDSLYTV 286
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ L + M V + + + + + +
Sbjct: 287 HKDYLMFFSDSVRGLQPGAPVEFRGMRLGSVAQVPFFKEGIEHRVKNDYRIPVLIHIEPE 346
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
K + S + + ++ + D
Sbjct: 347 RLKALGKDFDFDSSLKDAESRGIRASLKSANLLTGSLYIDLDFNPQDKPWDGPHELFGYP 406
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+A + ++ + IN + + + + M
Sbjct: 407 LIPTTSGGLAQIQQKLVQTLD-----KINAIPLTPMINEATKTLAESQRTMKSTQKTMKS 461
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+N+I + KE +L ++ Q+ + + + N + +++L
Sbjct: 462 LNDIISSKEVKALPQEMQKTLQELNRSMKGFQP------------GSPAYNKMVGDMQRL 509
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ + L+ +V+ + K
Sbjct: 510 DQVLRELQPVLHTLNEKSNALVFEAAASNDPQPK 543
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 45/481 (9%), Positives = 133/481 (27%), Gaps = 55/481 (11%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
+V+ L ++ Y S V++ + + +GL + ++ + VG + +
Sbjct: 25 IVTALIGAWILFYHFSHQG-------PVVMLVTTTAEGLEAGKTKIKSRSVDVGVVETVT 77
Query: 73 LDQEYPNHSLAKALIRP--DTPLYPSTTATI-----------RTQGLAGITYIELSTL-- 117
L + + +A + D L T + L YIEL
Sbjct: 78 LS-DDLSKVRVQARLNSGMDKLLRQDTAFWVVKPQIGREGVSGLGTLLSGAYIELQPGTK 136
Query: 118 -----RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ + + + S + ++ + +
Sbjct: 137 GKDGKDTYQLLDAPPLASPDAKGLRIVLDSEKSGQLNAGDPVLFHNYRVGSVETSYFDPK 196
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN------TFNTITDLITS 226
++ + + ++ +N+ T ++ + ++ +
Sbjct: 197 QRAMRYQLFISAPYDQLVTSNVRFWKDSGVTFDMSAQGMRVEMGSLATLFSGGVSFDVPH 256
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + ++ +N + ++ + D Q V + L S
Sbjct: 257 GWDRGEKAKEKAEYRLFDNQRSIQDSLYTVHKDYLMFFSDSVRGLQPGAPVEFRGMRLGS 316
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ ++N + ++ + S + S+
Sbjct: 317 VAQVPFFKEGIEHRVKNDYRIPVLIHIEPERLKALGKDFDFDSSLKDAESRGIRASLKSA 376
Query: 347 QKFAELM-SKIN------------NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ ++ + + + T +KIN +
Sbjct: 377 NLLTGSLYIDLDFNPQDKPWDGPHELFGYPLIPTTSGGLAQIQQKLVQTLDKINAI--PL 434
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN--NFERNPQDIVWGRE--KGSVKIYK 449
+ ++ L + Q ++ Q+T+ +D ++ + PQ++ + S+K ++
Sbjct: 435 TPMINEATK-TLAESQRTMKSTQKTMKSLNDIISSKEVKALPQEMQKTLQELNRSMKGFQ 493
Query: 450 P 450
P
Sbjct: 494 P 494
>gi|221068183|ref|ZP_03544288.1| Mammalian cell entry related domain protein [Comamonas testosteroni
KF-1]
gi|220713206|gb|EED68574.1| Mammalian cell entry related domain protein [Comamonas testosteroni
KF-1]
Length = 329
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/285 (11%), Positives = 84/285 (29%), Gaps = 4/285 (1%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ +L + P +++ S +G+ + F+G P+GR+ + L ++ L
Sbjct: 43 AAAYLLYARGVFEPTQRLVLTADDS-EGVVVGMDMTFSGFPIGRVHKIELAKDGSVRILV 101
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER--NQRAMITATP 141
+ L S+ T+ +GL G T I+ T + + + + A
Sbjct: 102 DVTEKDAHWLRQSSVFTLV-KGLVGGTTIKAYTGMLDDAPLPPDSVRPVLSGDATAELPQ 160
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ A + +DS+ + + +M+
Sbjct: 161 IINSAKEVLANVAALTATDSALGGSLAEVRKLAERMQGQGGVLGAVLGSDEEAKKVGQML 220
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
D + ++++N +L + + S +
Sbjct: 221 ERANSLLGRMDRMVARADSQVFDANGVMPQVKATMEQLNGLLADTRKSMAKVDAVLADMQ 280
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ RE + + +++ L S + + + +
Sbjct: 281 VVGSNAREASTDLGALRAEVESNLLRLESVLNDLQRKWPFSHKPE 325
>gi|120401977|ref|YP_951806.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954795|gb|ABM11800.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 372
Score = 54.9 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V + S GL ++V G+PVG + + + + + D +
Sbjct: 34 DTISVTAQF-DSAAGLYEGNTVAVLGMPVGEVTKI---VTKGGYVEVEFTVDGDVRVPAD 89
Query: 97 TTA-TIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
A TI L R + + T
Sbjct: 90 AMAVTISNSILTDRQIELTPPYRGDGPMLQNHDTIG 125
>gi|251789450|ref|YP_003004171.1| mammalian cell entry related domain-containing protein [Dickeya
zeae Ech1591]
gi|247538071|gb|ACT06692.1| Mammalian cell entry related domain protein [Dickeya zeae Ech1591]
Length = 876
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 7/133 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + + L + Q G + S DG+ + VR+ G+ VG + +
Sbjct: 23 FWLLPFIALLLAGWLLYTNQQERGATVTIDFV---SADGIVPGRTPVRYQGVEVGTVRNI 79
Query: 72 FLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIA 128
L + +A L T + T LAG++ ++ +
Sbjct: 80 KLSDDLRTIQVIASIRNDMKEALRSGTQFWLVTPKASLAGVSGLDALVGGNYIGMLPGGG 139
Query: 129 TERNQRAMITATP 141
+ P
Sbjct: 140 DPASHFTAQDTQP 152
Score = 43.4 bits (99), Expect = 0.082, Method: Composition-based stats.
Identities = 12/104 (11%), Positives = 23/104 (22%), Gaps = 1/104 (0%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLA 107
L + V F GI VG + GL L + R + ++ + +
Sbjct: 755 AGSLQIGTPVLFRGIEVGTVTGLSLGALSDRVSVALRISKRHAHLVRDNSVFWLASGYNL 814
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ + P+
Sbjct: 815 QFGLTGGVIKSGTFQQFIRGGIAFATPPATPLAPTAQAGKHFLL 858
>gi|271500349|ref|YP_003333374.1| mammalian cell entry related domain-containing protein [Dickeya
dadantii Ech586]
gi|270343904|gb|ACZ76669.1| Mammalian cell entry related domain protein [Dickeya dadantii
Ech586]
Length = 876
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 7/133 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + + + L + Q G + S DG+ + VR+ G+ VG + +
Sbjct: 23 FWLLPVVALLIAGWLLYTNQQERGATVTIDFV---SADGIVPGRTPVRYQGVEVGTVRNI 79
Query: 72 FLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIA 128
L + +A L ST + T LAG++ ++ +
Sbjct: 80 KLSDDLRTIQVVASIRNDMKDALRSSTQFWLVTPKASLAGVSGLDALVGGNYIGMLPGRG 139
Query: 129 TERNQRAMITATP 141
P
Sbjct: 140 DPATHFTAQDNQP 152
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 1/56 (1%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA-KALIRPDTPLYPSTTATIRT 103
L + V F GI VG + GL L S+A + R + ++ + +
Sbjct: 755 AGSLQIGTPVLFRGIEVGTVTGLSLGTLSDRVSVALRISKRHAHLVRDNSVFWLAS 810
>gi|297190649|ref|ZP_06908047.1| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
gi|297150575|gb|EDY63784.2| secreted protein [Streptomyces pristinaespiralis ATCC 25486]
Length = 412
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/120 (11%), Positives = 35/120 (29%), Gaps = 7/120 (5%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFL 73
+ WLS + + + + G + + ++ G+ +G + +
Sbjct: 13 VAFLLVPVLLIWLSVAVYDKKFTDDATVTVLTGAAGNEMHRGAEIKLRGVVIGEVRDIRA 72
Query: 74 DQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
D + + D + TA + L G ++ L + A +
Sbjct: 73 DGTG---ARLTLAVDRDELRRVPADVTAQMLPTTLFGERFVALVPPSRNTSARTLGAGDT 129
>gi|169631590|ref|YP_001705239.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243557|emb|CAM64585.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 523
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 32/103 (31%), Gaps = 2/103 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
V + + L + + + V+ + DGL S V+++G+ V
Sbjct: 15 NQLLTLAVVTLVAIVALTGAMLLKSAGRLN-DYVRVVADLTNVGDGLPQKSDVKYHGVLV 73
Query: 66 GRIVGLFLD-QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
G + + PN + S TA + +
Sbjct: 74 GEVDDVTPATGSEPNFVYINLKPEYAKTIPSSATARVVPSNVF 116
>gi|239931480|ref|ZP_04688433.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 409
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/138 (12%), Positives = 41/138 (29%), Gaps = 14/138 (10%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVR 59
M + G+ + + + + D ++ GSV + + V+
Sbjct: 1 MRRRC----AGVVFLLVPALLVWLAVAVYDKRFTDSDP---VVVETGSVGNEMHLGAEVK 53
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG + + + + ++P + A + L G ++ L
Sbjct: 54 LRGVVVGEVRAVEATGDG---ARLTLAMKPGALDDVPSDVRAQMLPTTLFGERFVALVPP 110
Query: 118 R-KEKKTIFQIATERNQR 134
+ + A R
Sbjct: 111 EAPSAEPLAPGAVIPQDR 128
>gi|126436756|ref|YP_001072447.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236556|gb|ABN99956.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 379
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/115 (20%), Positives = 40/115 (34%), Gaps = 12/115 (10%)
Query: 3 SKNYYTSV-GLFVVSILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLST 54
+++ + GL +V W L + E+ ++P V +
Sbjct: 2 TRSRHARASGLVLVLTAVVGLSGCGWRGLNSLPLPGTAGGGPGSFEIKAQLPD-VTNIQQ 60
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+S VR + VG + + HSL + D L + TATI L G
Sbjct: 61 NSRVRVGDVTVGNVTAIE---RQDWHSLVTMRLDGDVSLPANVTATIGQTSLLGS 112
>gi|182411956|ref|YP_001817022.1| hypothetical protein Oter_0131 [Opitutus terrae PB90-1]
gi|177839170|gb|ACB73422.1| Mammalian cell entry related domain protein [Opitutus terrae
PB90-1]
Length = 306
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 6/79 (7%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
VV ++ + + E+ I GL + V F G+ +G + +
Sbjct: 20 VVPLIALAVGGWMVF---RELRARGPEITIEFATGA-GLEPGKTKVEFRGVEIGSVTAVE 75
Query: 73 LDQEYPNHSLAKALIRPDT 91
L + A +R D
Sbjct: 76 LAPDLDR-VTVTARLRRDA 93
>gi|296171121|ref|ZP_06852574.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295894377|gb|EFG74130.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 476
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 39/122 (31%), Gaps = 10/122 (8%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL 71
++ ++ + + + V + GL V+ G+ VGR+ +
Sbjct: 16 LILVVATLGTIVLTSAFFSGSFKSYVPVTVISDR--AGLVMDRGGKVKMRGVQVGRVAEI 73
Query: 72 FLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIA 128
+ + + + PD + + A IR Y++ + R K + A
Sbjct: 74 T---SGKDRVVLRLDLYPDEVKYIPANVHARIRATTFFSAKYVDLVYPSRPTPKRLAAGA 130
Query: 129 TE 130
Sbjct: 131 VI 132
>gi|326384827|ref|ZP_08206503.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326196489|gb|EGD53687.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 417
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/309 (8%), Positives = 83/309 (26%), Gaps = 10/309 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ V ++ L S + +R +Q G + GL S V + G+
Sbjct: 9 RAQLIVV---LLIGLVASVYGGIRYARLDQAAGIGVYRVTVKMPEGGGLFPQSQVTYRGV 65
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIR-PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+GR+ + + + L+ + + S A + + G +++L
Sbjct: 66 EIGRVDDMSMVP---GGIEVELLLDSSEAQVPASAVAVVANRSAIGEQFLDLQPPSGAGP 122
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + + + + + ++ +
Sbjct: 123 YLHDGSVIDKVELPPQLDEVVQSTIDLT---ETIPVDALRTTVDELGQAFNGQGENLSRL 179
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
I+++ + + + ++D+ + ++N + + + A +
Sbjct: 180 IDSLDHLSKDGVKNLDQTIALINNADPVLATQNEQSDEILRWSKGLDAVSATLASSDPAV 239
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ S + + D + + ++ +
Sbjct: 240 RRILRNGPRAASALSQFLDDNGADATKLIGQLGKTADEVAPTSYAAGMTFAMLSLLSAGS 299
Query: 303 NIADSTSNM 311
+ A S
Sbjct: 300 HSAASPDGS 308
>gi|238898409|ref|YP_002924090.1| paraquat-inducible protein B [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|229466168|gb|ACQ67942.1| paraquat-inducible protein B [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 552
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/282 (10%), Positives = 82/282 (29%), Gaps = 12/282 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S N + ++ P S+ GL + + V F G+ VG +
Sbjct: 281 SIQNSLYAEHKDFLLFFPDSIRGLQSGAPVEFRGVRVGTVSEAPF-----------FFKE 329
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
P I + + + + A + RA + +
Sbjct: 330 APQPQPFDHDFHIPVLIKIEPARFKSGLGKDINLKMLKEAEQNGLRAALKSGNLITGALF 389
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + ++ I+ + + I+ + Q T
Sbjct: 390 VDLDFYP-NAKPWKEFQSLEGYPLLPTVSGGTTQIQQKVNDILDKINQLAMEPALNQFTQ 448
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+S+ T + +T L++++ + ++ + + + + +K + H +
Sbjct: 449 TLVESQKTMQKMQKTLTLLNEIMGSKGMKNLPETFQKTLHQLSESIKGFEPGSQGYHKMM 508
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
Q ++ +++ LL ++K + A
Sbjct: 509 GNLQGLNDILRELQPLLRTLNTKSNALIFQAPPSQDPQPMKA 550
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/389 (10%), Positives = 83/389 (21%), Gaps = 28/389 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
++ V F G VG + D + Q Y
Sbjct: 175 INPGDPVLFRGYRVGSVETSHFDVASR---------------------LMNYQLFINSPY 213
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L T IA + + + M S + F K + + +
Sbjct: 214 DSLVTTNVRFWQDSGIALDLSSQGMRVEISSLLTLFGGGVSFDVPKGLELGEPVNNKTQF 273
Query: 172 IEKPLTTTIAN--IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+I N L I + V +
Sbjct: 274 QLFDSKASIQNSLYAEHKDFLLFFPDSIRGLQSGAPVEFRGVRVGTVSEAPFFFKEAPQP 333
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
D I + K + + + + L D
Sbjct: 334 QPFDHDFHIPVLIKIEPARFKSGLGKDINLKMLKEAEQNGLRAALKSGNLITGALFVDLD 393
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+K F S + + +E + + +
Sbjct: 394 FYPNAKPWKEFQSLEGYPLLPTVSGGTTQIQQKVNDILDKINQLAMEPALNQFTQTLVES 453
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ M K+ L K + TF+ T +++ I G + +
Sbjct: 454 QKTMQKMQKTLTLLNEIMGSKGMKNLPETFQKTLHQLSESIKGFEP-----GSQGYHKMM 508
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ L + + L +++
Sbjct: 509 GNLQGLNDILRELQPLLRTLNTKSNALIF 537
>gi|300789438|ref|YP_003769729.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299798952|gb|ADJ49327.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 338
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G R ++ VR G+ +G++ + + + + + L
Sbjct: 35 GATIGYTARFTD-ATSVNRGDEVRMAGVRIGQVDSVRVVE--HRLADVGFSVGRTHRLTA 91
Query: 96 STTATIRTQGLAGITYIELSTL 117
S + TIR + L G Y+ +
Sbjct: 92 SASVTIRYRNLVGQRYLSVDPG 113
>gi|119714954|ref|YP_921919.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119535615|gb|ABL80232.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 472
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/123 (17%), Positives = 35/123 (28%), Gaps = 4/123 (3%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
L V V L S+V+ + + VG + + L + H+
Sbjct: 27 VYALPLPGGTDVGDNPITVTADF-RDVLDLVPKSTVKVDDVNVGEVTDVDLVE---GHAQ 82
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+R D L + A IR L G ++ LS T + P
Sbjct: 83 VTMKLRNDVDLPDNAIAEIRQTSLLGEKFVSLSPPTDTPATGELGDGDTIGLEDTGRNPE 142
Query: 143 GIN 145
Sbjct: 143 VEE 145
>gi|301025407|ref|ZP_07188959.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|299880083|gb|EFI88294.1| conserved hypothetical protein [Escherichia coli MS 196-1]
Length = 846
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/76 (23%), Positives = 28/76 (36%), Gaps = 5/76 (6%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
+ Y V I S DG+ + VR+ G+ VG + + L + K I+ D
Sbjct: 9 DSYQDRGNTVTIDF-MSADGIVPGRTPVRYQGVEVGTVQDISLS-DDLRKIEVKVSIKSD 66
Query: 91 TP--LYPSTTATIRTQ 104
L T + T
Sbjct: 67 MKDALREETQFWLVTP 82
Score = 41.8 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 726 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 784
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 785 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 839
>gi|262196492|ref|YP_003267701.1| hypothetical protein Hoch_3306 [Haliangium ochraceum DSM 14365]
gi|262079839|gb|ACY15808.1| Mammalian cell entry related domain protein [Haliangium ochraceum
DSM 14365]
Length = 350
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 36/131 (27%), Gaps = 4/131 (3%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
T VG V+ I+ + L R + + V L + V+ +
Sbjct: 10 RATRVGALVLLIIAALVLGVIGLQRCDV--RERIRATVYFTH-VGPLREGADVQVASRVI 66
Query: 66 GRIVGLFLDQEYPNHSLAK-ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
G + + L +P S ++ A +Y + ++ I
Sbjct: 67 GEVEAISLAPAHPGRSSDHPLGSDDGVAVHVQVQARYAFMAPVNGSYFISAKGVVGERFI 126
Query: 125 FQIATERNQRA 135
A N
Sbjct: 127 EIGAPPDNGPR 137
>gi|213161446|ref|ZP_03347156.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
Length = 123
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + ++ + Y V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLVW-----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
++ + I+ D L T + T
Sbjct: 82 SKD-LRKIEVRVSIKSDMEDALREETQFWLVTP 113
>gi|126643116|ref|YP_001086100.1| toluene tolerance efflux transporter [Acinetobacter baumannii
ATCC 17978]
Length = 201
Score = 54.6 bits (128), Expect = 3e-05, Method: Composition-based stats.
Identities = 9/63 (14%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ + +V+GL + V +G+ +GR+ + LD + +
Sbjct: 5 GLVGTNLSDGYTMKAQF-DNVNGLKPRAKVTMSGVTIGRVDSITLDPVT-RLATVTFDLD 62
Query: 89 PDT 91
Sbjct: 63 GKL 65
>gi|54024559|ref|YP_118801.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54016067|dbj|BAD57437.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 409
Score = 54.6 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/278 (9%), Positives = 76/278 (27%), Gaps = 10/278 (3%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSV--DGL--STDSSVRFNGIPVGRIVG 70
V+ L + + + + + GL D+ VR G+ +GR+
Sbjct: 26 VAGLAMVTVLLAVVLLALAMFTGRFQSTAVVTVDAPRSGLVLDPDAKVRMRGVEIGRVAA 85
Query: 71 LFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELS-TLRKEKKTIFQI 127
+ + P+ + + IR+ + G Y+ + + +
Sbjct: 86 IEPAA---GRVRLTLALDPELMRMVPENALVDIRSTTVFGAKYVNFVAPPQPSDRPLRAG 142
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
A R + + + +++ + I + + + L +A +
Sbjct: 143 ALVRGESVTVEFNTLFQRLSTILSRIDPAELNATLSAIGQALHGRGETLGDLLARADAYL 202
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ + + M T H T + + +++L N+
Sbjct: 203 REMNPTLPALRADMAATAQVGHLYADTAPELLHTVDNATGTATTLTEHAAEFDEVLMNVT 262
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + + + + + +
Sbjct: 263 GLAQTAGTVLAENEGRLAESLGLLAPTTGLLNRYNPVF 300
>gi|258622788|ref|ZP_05717806.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258625814|ref|ZP_05720693.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|262170540|ref|ZP_06038218.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
mimicus MB-451]
gi|258582052|gb|EEW06922.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258584976|gb|EEW09707.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261891616|gb|EEY37602.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
mimicus MB-451]
Length = 163
Score = 54.6 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKIEFWVGSFVLAGICAILVMIFQVADVKGLGSSDTYRLTAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ + L+ + I +++ I T GL G Y+ L +
Sbjct: 64 VVVGRVESITLNPKSL-LPTVTLAIDSQYNQFSENSSLQILTSGLIGEQYLSLVPGFVFE 122
Query: 122 KTIFQIATER 131
+R
Sbjct: 123 DETMLKEGDR 132
>gi|302523376|ref|ZP_07275718.1| secreted protein [Streptomyces sp. SPB78]
gi|302432271|gb|EFL04087.1| secreted protein [Streptomyces sp. SPB78]
Length = 344
Score = 54.6 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/106 (14%), Positives = 30/106 (28%), Gaps = 4/106 (3%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
V +V G+ S +R G+ VG++V + I
Sbjct: 36 GVRAASPGGTRVTAYFDRAV-GVYEGSDLRILGVRVGKVVAVRPQG---TKVGVVLDIDH 91
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ + A + Y++L+ + + A R
Sbjct: 92 GVDVPANARAVAVAPSVVADRYVQLTPAYTKGPRLRDGAVLPLSRN 137
>gi|317508279|ref|ZP_07965959.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253454|gb|EFV12844.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 407
Score = 54.6 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/110 (14%), Positives = 40/110 (36%), Gaps = 1/110 (0%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
++++ + +L + + P ++ + +GLS + V++ G+ +G++ G+
Sbjct: 22 VAITLVLSLVGIVLYLYGNGAF-TPSFKLQVESASVGEGLSVGADVKYRGLQIGKVEGID 80
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
L T+A + + G IEL +
Sbjct: 81 TKDVNHQIIRLSLDANQARGLRGITSAKYQASNVFGAPAIELLSGNDNTP 130
>gi|291439856|ref|ZP_06579246.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
gi|291342751|gb|EFE69707.1| secreted protein [Streptomyces ghanaensis ATCC 14672]
Length = 417
Score = 54.6 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 39/128 (30%), Gaps = 10/128 (7%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIPVGRIV 69
G+ + + + + D ++ GSV + + V+ G+ VG +
Sbjct: 15 GVVFLLVPALLVWLAVAVYDKRFTDSDP---VVVETGSVGNEMHLGAEVKLRGVVVGEVR 71
Query: 70 GLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLR-KEKKTIFQ 126
+ + + ++P + A + L G ++ L + +
Sbjct: 72 AVEATGDG---ARLTLAMKPGALDDVPSDVRAQMLPTTLFGERFVALVPPEAPSAEPLAP 128
Query: 127 IATERNQR 134
A R
Sbjct: 129 GAVIPQDR 136
>gi|213028998|ref|ZP_03343445.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 195
Score = 54.6 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYP 78
+ W + Y V I S DG+ + VR+ G+ VG + + L ++
Sbjct: 1 MIAGWLVW----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSLSKD-L 54
Query: 79 NHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ I+ D L T + T
Sbjct: 55 RKIEVRVSIKSDMEDALREETQFWLVTP 82
>gi|206891186|ref|YP_002249683.1| mce related protein [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206743124|gb|ACI22181.1| mce related protein [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 296
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/79 (17%), Positives = 28/79 (35%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
I GL V+ +G +GR+ + L + + + A +
Sbjct: 50 YFITTKATGLYNGMPVKVSGFKIGRLKNMNLQDDGTVKIILSIEQSHAKWFREGSVAVLT 109
Query: 103 TQGLAGITYIELSTLRKEK 121
+G G +YIE+ + +
Sbjct: 110 KEGFIGESYIEILPGKGQP 128
>gi|54027022|ref|YP_121264.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018530|dbj|BAD59900.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 366
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 42/136 (30%), Gaps = 10/136 (7%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSN----QYDGPMAEVIIRIPGSVDGLSTDSSVR 59
+ +V +++L + + GP + + +++ L + V+
Sbjct: 2 RAARIAVAALSLAVLTGTTGCAVTVDNVPLPKPGIGGPGYTIHVVFDDALN-LPERAHVK 60
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY--IELSTL 117
G +G + + + + IR D L TTA +R G + + L
Sbjct: 61 IGGTDIGVVKEIS---TTNFLADVELEIREDIRLPRGTTAELRQATPLGDIFVAMTLPEH 117
Query: 118 RKEKKTIFQIATERNQ 133
+ T
Sbjct: 118 DPNAPVLQPGDTIGTD 133
>gi|226365588|ref|YP_002783371.1| Mce family protein [Rhodococcus opacus B4]
gi|226244078|dbj|BAH54426.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 349
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/315 (13%), Positives = 91/315 (28%), Gaps = 9/315 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS----IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M + TS+ ++ + LS DGP E+ + G VD + +
Sbjct: 1 MTIRTRTTSLTAALIVGATLPAAGCSLSLQELSVGRSPDGPSYEITAQFDG-VDRVVPGA 59
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
VR VGR+ + + + IR D P+ TA I G +I L
Sbjct: 60 EVRVGQEVVGRVADVS---TRDFTAEVEMRIRDDVPIPRDATARIELPTALGNPFIRLDV 116
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + ++ ++ I + ++
Sbjct: 117 ADAAGAPMSEGDVLPLEQTSRGPDIESGLAALATV-LNGSGIDQIHAIMNELTVAFTGRS 175
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
++ ++ L H D++ + + + D + + + +
Sbjct: 176 GKIRELVDMLNDTLGVVDDHRDELDRAMVASNAFAAELAAGQPVLDRAMTDLAPVVDLLV 235
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ +QI + +S ++ + + + V +D S+ + + S
Sbjct: 236 SQRDQITALMGEASRLSREAEHVLGSAGSALSTEIDDAGTVLAALDGFESELAPTLNSVA 295
Query: 297 TSAFLENIADSTSNM 311
T A
Sbjct: 296 TFLGGFAAATPGDYT 310
>gi|126432879|ref|YP_001068570.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126232679|gb|ABN96079.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 395
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/281 (8%), Positives = 78/281 (27%), Gaps = 3/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S + G V + L + V+ G V ++ D+ V+
Sbjct: 1 MKSISARNVAGTLAVVCIAAIVALAVGLFNGSFTRSATVTVVSDRVGLV--MNPDTKVKL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRK 119
+G VG++ + + + + + + + G +E +
Sbjct: 59 HGAQVGKVAAIEALPDGRAAIRLAMDPSQLAIIPSNVLVNVGSTTVFGSKAVELVPPANP 118
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + A+ K++++ + + + + T
Sbjct: 119 SPDPLRAGQVLDAGHVTVEINTVFEQLVSVLAKVEPAKLNETLGALSQGLAGRGEKFGRT 178
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++T+ L ++ ++ + + ++ T S +
Sbjct: 179 LVDLDTLLADLDPSMDNLSRDIAVAPGVLNAYADAAPDLLATADNASRISDTLVERQSDL 238
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ +L + + DV ++ +
Sbjct: 239 DALLVSAIGLAEVGNDVVATNRGAFTDVMRLLVPTTDLTNQ 279
>gi|262202875|ref|YP_003274083.1| mammalian cell entry related domain-containing protein [Gordonia
bronchialis DSM 43247]
gi|262086222|gb|ACY22190.1| Mammalian cell entry related domain protein [Gordonia bronchialis
DSM 43247]
Length = 381
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/327 (10%), Positives = 91/327 (27%), Gaps = 7/327 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G E+ + L + + V+ NG VG++ + ++ K + T L
Sbjct: 58 GEAIELTATF-DNALNLPSRAKVKLNGTDVGQVTEIS---AKDYRAIVKMDVSKSTQLPV 113
Query: 96 STTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
T A +R G ++ L K + + T + + +
Sbjct: 114 GTGAELRQATPLGDVFVALLPPPGAAKGFLREGDTLTGPTSAAATVEDLLISVSGVVD-- 171
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
S ++ + I ++ + T +I+ ++T + + ++ T +
Sbjct: 172 SGSLNSLTTIITELSAAVSPHPTELNDSIQGLTTAIRKFNQNAGEVDEAMANTRVLTGEL 231
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ ++ IL + + + ++D + ++ E
Sbjct: 232 AAGRAQIMASINKLGPAVNAVNGQIGSILTTLDKTQSVTAATNDFLNTNGDNLVEMIGHL 291
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
V + S + S S S +
Sbjct: 292 ATVLSGLRQASGTVGSLSDNLHILVPRWVKTTQGSAAALSAKVYWLNPGVGFDSASRLPE 351
Query: 335 IENITSNLNDSSQKFAELMSKINNISA 361
+ ++ + Q L++++
Sbjct: 352 MGDLDAGSAALQQTLTRLLARLTGTRG 378
>gi|117620093|ref|YP_858370.1| Mce family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|117561500|gb|ABK38448.1| Mce family protein [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 163
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 4/125 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VG F+++ + ++ + +G + ++ GL S V+
Sbjct: 1 MKFSKVEFLVGAFMLAGIGAILALALQVAGLSFKPEGETYTLRAHF-DNIGGLKVRSPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + LD + ++ ++T +I T GL G YI L
Sbjct: 60 VGGVVVGRVSDITLDAKSQVPI-VSLQMQKSAGEFSETSTLSILTSGLLGEQYIGLMPGF 118
Query: 119 KEKKT 123
+++
Sbjct: 119 TDEEM 123
>gi|262201469|ref|YP_003272677.1| mammalian cell entry related domain-containing protein [Gordonia
bronchialis DSM 43247]
gi|262084816|gb|ACY20784.1| Mammalian cell entry related domain protein [Gordonia bronchialis
DSM 43247]
Length = 398
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/112 (16%), Positives = 38/112 (33%), Gaps = 5/112 (4%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWL-SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
S+ Y L V W+ +RS E+ +P ++T + VR++
Sbjct: 11 SRTSYI---LRAVIATALIVAFAIWMVARSTGVLETNPEIHAEVPVEAGLITTGAPVRYH 67
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
G+ VG I + + + + + + + G Y++
Sbjct: 68 GVKVGEIASID-AGTTSSVVSLTIDDNYLSSIPNTVLMRVLPRTFFGDIYVQ 118
>gi|111018968|ref|YP_701940.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110818498|gb|ABG93782.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 452
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 10/116 (8%)
Query: 1 MESKNYYT---SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M + +GL +L + +++ G+ L ++
Sbjct: 1 MSNTTSVVGRRVLGLVFFLVLALFLAFTIGMFNKTFTKVVKIDLLTDTAGNA--LPPNAD 58
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
V+ G+ VG + I+PD + + TA + + L G Y
Sbjct: 59 VKVRGLIVGEVRS---ASSQEGEVTLALAIQPDKAPLIPSNATARLLPKTLFGERY 111
>gi|120401974|ref|YP_951803.1| hypothetical protein Mvan_0959 [Mycobacterium vanbaalenii PYR-1]
gi|119954792|gb|ABM11797.1| Mammalian cell entry related domain protein [Mycobacterium
vanbaalenii PYR-1]
Length = 529
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/273 (10%), Positives = 67/273 (24%), Gaps = 2/273 (0%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
+ ++ + + + D V+ + DGL S V+++G+ VG + +
Sbjct: 22 VALLVIALVVSGALLVKSTGRMD-AHVRVVAALVNVGDGLPQRSDVKYHGVLVGAVDDVT 80
Query: 73 L-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
PN + TA + + ++ ++L
Sbjct: 81 PAQYGDPNFVHIDLKPEYAASIPAGVTARVVPSNVFAVSSVQLVDRSGGPPIQSGARIPE 140
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + I+ T + D + I + + T + L
Sbjct: 141 DTELPTVLFQTTISKLRDILAATGRGREDDTVGILAAVNAATEDRRTELLTSGAQLNSLV 200
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ + I D+ + V Q + +
Sbjct: 201 DELDRIVATDPGPTTVSALVDATRGLQQTAPELVDALHQAVEPMQTLVEQSAQLTTFING 260
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + E+ I +L
Sbjct: 261 GINTVGTTHTALNNHTDRMVRITTELTPVIGNL 293
>gi|120401162|ref|YP_950991.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119953980|gb|ABM10985.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 408
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 51/150 (34%), Gaps = 5/150 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
Y GL + + + +Y + ++ + S + + V +NG+ +G
Sbjct: 16 YKLAGLVLAILTVIAVTLVYL--QFRGDFMARTQLTMISARSGLSMDPGAKVTYNGVEIG 73
Query: 67 RIVGLF---LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
R+ + +D E + + + + A I + G Y+ +T +
Sbjct: 74 RVGNVEETSVDGEPRAKIILDVNPKYLDLIPSNVNADISATTVFGNKYVSFTTPEDPRPE 133
Query: 124 IFQIATERNQRAMITATPSGINYFISNAEN 153
+ + ++ T + +S A+
Sbjct: 134 RISASDVIDVTSVTTEFNTLFETVVSLADQ 163
>gi|289673097|ref|ZP_06493987.1| PqiB family protein [Pseudomonas syringae pv. syringae FF5]
Length = 298
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/273 (6%), Positives = 60/273 (21%), Gaps = 10/273 (3%)
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ ++ + V + + D K
Sbjct: 18 FDDQATAMAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYDPATKTFP 77
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
I ++ + +K + F G + + +
Sbjct: 78 GIVGAVIYPKRLGAAESKLKELGGSGDEEEQSARVLGAFVANGLRAQVRNGNLLTGQLYI 137
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-NDSSQKFAELMS 354
+ + + + + +E +++ + + +S
Sbjct: 138 AMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSNLPIDQLAGNLNGTLS 197
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
++ +S+ + + T N + + +
Sbjct: 198 ELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE--------DSPARQQLGQAMDE 248
Query: 415 LQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+Q T + R+P+ ++ GR +
Sbjct: 249 VQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 281
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 29 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 70
>gi|77362265|ref|YP_341839.1| putative paraquat-inducible protein B [Pseudoalteromonas
haloplanktis TAC125]
gi|76877176|emb|CAI89393.1| putative paraquat-inducible protein B [Pseudoalteromonas
haloplanktis TAC125]
Length = 551
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 30/273 (10%), Positives = 73/273 (26%), Gaps = 10/273 (3%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+I S+ GL + V + G +G +V + +P
Sbjct: 279 FYDFDYYLIEFEQSIRGLRAGAPVEYRGTRIGTVVE--------APANVIINGKPAHFKN 330
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
+T + + G Y + ++ +T RA + + +
Sbjct: 331 QNTAVPVLIKIEYGRLYHDNDLAKEYWQTSLNGWVNNGMRASLKPGNLLTGAVYVDFDIY 390
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + + T+ + + N I+ + Q+ SD +
Sbjct: 391 TDAPDAKLEKLAQYDVFPSISSGITVLADQVSDVLNKVNELKIEDSL--AQMQATFSDYQ 448
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
N + L+ D D + + + ++ D+ + + +
Sbjct: 449 GLANDMRALLNQKDTQNLPGDFNQNFKKMTKSMEQFEVTMRQFDKTMASYQAGSQFNNQL 508
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
Q+ Q+ L K + +
Sbjct: 509 QQTLQEFKRLSEQLQPLTKGLNEQPNMFIFDKA 541
Score = 43.0 bits (98), Expect = 0.088, Method: Composition-based stats.
Identities = 55/480 (11%), Positives = 121/480 (25%), Gaps = 55/480 (11%)
Query: 1 MESKNYYT---SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-S 56
M T + + + F ++ L + GP + + +G+ +
Sbjct: 1 MTETANITQKSKISAIWIIPVIALFVGVWMLYQYQTNLGPTIYITM---PQAEGIVAGKT 57
Query: 57 SVRFNGIPVGRIVGLFL-DQEYPNHSLAKALIRPDTPLYPSTTATI-----------RTQ 104
++ + +G+I + L D + + A+ D L +
Sbjct: 58 EIKVRSVKIGQIDHVRLSDSQDSVIARAQIDKNYDNLLTEDAKIWVVKPRIDETGISGMS 117
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
L Y+E S +KK + NAE ++
Sbjct: 118 TLLSGVYLEFSPGESKKKKEKFELQDEPALIGKDVKGGRFKLLSYNAEVLEVSTGIFFKN 177
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ A I + S + N T +
Sbjct: 178 YKIGQIETATFDWKNQAMKYGIFIKAPYENLITLNSIFWVNSGIEIDLSADGININTGSL 237
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ L K ++ Q +I + ++F S + E Q I L
Sbjct: 238 SKLLKGGISVG-LPDQQAPGDIAQNEHSFSLSQSYKEALEERFYDFDYYLIEFEQSIRGL 296
Query: 285 LSDFSSKMKSKETSAFLENIADS--TSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ + + +E A+ + + + + ++
Sbjct: 297 RAGAPVEYRGTRIGTVVEAPANVIINGKPAHFKNQNTAVPVLIKIEYGRLYHDNDLAKEY 356
Query: 343 NDSSQK----------------------------FAELMSKINNISALKENNSLFKDAQR 374
+S +K+ ++ S+
Sbjct: 357 WQTSLNGWVNNGMRASLKPGNLLTGAVYVDFDIYTDAPDAKLEKLAQYDVFPSISSGITV 416
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN--HFDDCLNNFERN 432
D K+N I ++L Q+ +D Q L ++ +N + +F +N
Sbjct: 417 LADQVSDVLNKVNEL--KIEDSLAQM-QATFSDYQGLANDMRALLNQKDTQNLPGDFNQN 473
>gi|302560792|ref|ZP_07313134.1| mce family protein [Streptomyces griseoflavus Tu4000]
gi|302478410|gb|EFL41503.1| mce family protein [Streptomyces griseoflavus Tu4000]
Length = 416
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/281 (11%), Positives = 82/281 (29%), Gaps = 16/281 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIPVGR 67
G+ + + + + D ++ GSV + + V+ G+ VG
Sbjct: 13 LAGVVFLLVPALLVWLAVAVYDKKFTDSDP---VVVETGSVGNEMHLGAEVKLRGVVVGE 69
Query: 68 IVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTI 124
+ + + + ++P + A + L G ++ + + +
Sbjct: 70 VRAVEATGDG---ARLTLAMKPGALDDVPSDVRAQMLPTTLFGERFVALVPPPAPSDRPL 126
Query: 125 FQIATERNQRA------MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
A R+ + S +S S+ ++ + + L
Sbjct: 127 AAGAVIPQDRSENAVELQQVLDDVLPMLTAVQPQKLSATLSAVSQALEGRGDRLGDTLVR 186
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
A++E + L + +++ + V ++ T T + +A
Sbjct: 187 LDAHLEEFNPHLPALNRDLKELVKVSHVYADAAPDIITALTDFTTTSGTLAEQEAEYATT 246
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ + + K+ D +I R T + E
Sbjct: 247 LGATTRTAEDMTAFLRKNKDNIIRLGASGRPTLELLAEYSS 287
>gi|124004075|ref|ZP_01688922.1| mce related protein [Microscilla marina ATCC 23134]
gi|123990654|gb|EAY30134.1| mce related protein [Microscilla marina ATCC 23134]
Length = 166
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 42/129 (32%), Gaps = 9/129 (6%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
L + ++ ++ + Y + + L+ ++ ++ G+ +GR+ +
Sbjct: 8 LVAFMAVVMLIGFVWRINVPDYYKLELHYQQVNF------LTNNALIQTRGVAIGRVESV 61
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L + I D + + I+ +GL G + IE+ + +K
Sbjct: 62 QL---TDSLVKVTVDINQDVNIPRGSQFIIKPKGLVGKSMIEVKFAKDKKDYYKPEEAIV 118
Query: 132 NQRAMITAT 140
Sbjct: 119 GITENAHQF 127
>gi|315443556|ref|YP_004076435.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261859|gb|ADT98600.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 443
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/310 (12%), Positives = 97/310 (31%), Gaps = 8/310 (2%)
Query: 1 MESKNYYTSVG---LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M S +VG +S F + L + G I++P +V L ++S
Sbjct: 2 MRSVKSLAAVGCAVAVTLSGCAFEGVNSLPLPGAEGRGGDAVTYHIQVP-NVATLESNSP 60
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V + + VG + + + H+ + I+PD + + AT+ L G ++ L+
Sbjct: 61 VMIDDVVVGSVGKMTVQ---NWHADVEVSIKPDVVIPANAVATVGQTSLLGSMHLALNPP 117
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS-KKISDSSRHIQKIIENIEKPL 176
E + + P+ S + + + I + +
Sbjct: 118 LGESPSGRLQPGSTLPLNESSTYPTTEQTLSSLSTVANGGGLGQIGDIIHNMSTGLAGRE 177
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
++ + + + ++ + Q + + + D + + +
Sbjct: 178 DDARELLQRLDNFVGVLAEQREDIVASIQQLRRVAGTFANQQQVIDRALTEIPPAIDVLI 237
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
Q+ Q + ++ V + D+ + + + + + D + +
Sbjct: 238 QERPQFTTALDRLGTFSDTATQLVNDAGDDLVKNLENLGPILGALADVGPDLNLALLWAS 297
Query: 297 TSAFLENIAD 306
+ AD
Sbjct: 298 AFPYGPTFAD 307
>gi|262401809|ref|ZP_06078374.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
sp. RC586]
gi|262351781|gb|EEZ00912.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
sp. RC586]
Length = 163
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKIEFWVGSFVIAGICAILVMIFQVADVKGLGSSDTYRLTAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ + L+ + I +++ I T GL G Y+ L +
Sbjct: 64 VVVGRVESITLNPKSL-LPTVTLAIDSQYNQFSENSSLQILTSGLIGEQYLSLVPGFVFE 122
Query: 122 KTIFQIATER 131
+R
Sbjct: 123 DETMLKEGDR 132
>gi|226361063|ref|YP_002778841.1| Mce family protein [Rhodococcus opacus B4]
gi|226239548|dbj|BAH49896.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 452
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 10/116 (8%)
Query: 1 MESKNYYT---SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M + +GL +L + +++ G+ L ++
Sbjct: 1 MSNTTSVVGRRVLGLVFFLVLALFLAFTIGMFNKTFTKVVKIDLLTDTAGNA--LPPNAD 58
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
V+ G+ VG + I+PD + + TA + + L G Y
Sbjct: 59 VKVRGLIVGEVRS---ASSQEGEVTLALAIQPDKAPLIPSNATARLLPKTLFGERY 111
>gi|118471765|ref|YP_890046.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118173052|gb|ABK73948.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 404
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 4/106 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP----LYPSTTATIRTQGLA 107
L + V +NG+PVGR+ + A+ ++ D L + A++ +
Sbjct: 53 LDPGAKVTYNGVPVGRVAEVGTAARTGTGVRARVMLDVDPRYVPLLPANVEASVTATTVF 112
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
G Y+ L + AT + + T + + E
Sbjct: 113 GNKYVALRSPEHPSAQRVSPATPIDATGVTTEFNTLFETIMRITEQ 158
>gi|119717048|ref|YP_924013.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119537709|gb|ABL82326.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 436
Score = 54.2 bits (127), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 39/136 (28%), Gaps = 4/136 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+ ++++ + + P V I+ + L+ VR +G VG+
Sbjct: 17 LVAGVAFLAVIALLIALSI--AIYQKVFEPATTVTIQADRAGLQLAKFGDVRLHGALVGQ 74
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQ 126
+ + D + + + + I L G +I ++ +
Sbjct: 75 VRSVSQDGDQ-AVITVALQPDEAKRIPENVSVQILPTTLFGQKFISLVTPADPSPTPLAD 133
Query: 127 IATERNQRAMITATPS 142
R S
Sbjct: 134 GDVIPADRVETNVELS 149
>gi|302832129|ref|XP_002947629.1| hypothetical protein VOLCADRAFT_87956 [Volvox carteri f.
nagariensis]
gi|300266977|gb|EFJ51162.1| hypothetical protein VOLCADRAFT_87956 [Volvox carteri f.
nagariensis]
Length = 327
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 31/96 (32%), Gaps = 5/96 (5%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
LFVV YW + I +P G+ + +R G+P+G ++
Sbjct: 101 LFVVIGSAICGALAYWTVGTPLRRFNPYSFYIMLPQ-ATGVQLGTPLRMKGVPMGSVLSA 159
Query: 72 FLDQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGL 106
+ + + T + + + GL
Sbjct: 160 TPMLD---RVKVEVEVNEAKTIIPRNAKFELTQSGL 192
>gi|183980214|ref|YP_001848505.1| MCE-family protein Mce6D [Mycobacterium marinum M]
gi|183173540|gb|ACC38650.1| MCE-family protein Mce6D [Mycobacterium marinum M]
Length = 370
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/308 (9%), Positives = 83/308 (26%), Gaps = 7/308 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
V+ S GL ++V GIPVG I + ++ + + + A
Sbjct: 36 VVTAQFDSAAGLYEGNAVAVLGIPVGHITKI---VAKSGYAEVEFTVDRAVQVPADVQAV 92
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + IEL+ + T+ T R P + + + + +
Sbjct: 93 TISTSILTDRQIELTPAYRGGPTLRNHDTIGLTRTRA---PVEFDRVLGMLDRLASSLQG 149
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
R + ++ N + + + T + +
Sbjct: 150 DGRGGGPVAGVLDAGYDVVNGNGQHLKEAFDELSKALRLSADRGVHTREQMTAIIENLSS 209
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V Q+ + + S Q+ + + +E +
Sbjct: 210 LLDAAAKNDSTLRQFGSTVRQLSQIMANEGFGSGTSGQQLNALIQRTGDILNANREAIAR 269
Query: 281 -IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
I + + S + + ++ ++ + R + + ++ +
Sbjct: 270 GIANGNTTIQSVVDRQREVTEFFDVLPLMADNLYNAVDQRNGSIRAHQLTDRMIFDSQFG 329
Query: 340 SNLNDSSQ 347
+ +
Sbjct: 330 KEVCNLMG 337
>gi|118619942|ref|YP_908274.1| MCE-family protein Mce6D [Mycobacterium ulcerans Agy99]
gi|118572052|gb|ABL06803.1| MCE-family protein Mce6D [Mycobacterium ulcerans Agy99]
Length = 370
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/308 (9%), Positives = 83/308 (26%), Gaps = 7/308 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
V+ S GL ++V GIPVG I + ++ + + + A
Sbjct: 36 VVTAQFDSAAGLYEGNAVAVLGIPVGHITKI---VAKSGYAEVEFTVDRAVQVPADVQAV 92
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + IEL+ + T+ T R P + + + + +
Sbjct: 93 TISTSILTDRQIELTPAYRGGPTLRNHDTIGLTRTRA---PVEFDRVLGMLDRLASSLQV 149
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
R + ++ N + + + T + +
Sbjct: 150 DGRGGGPVAGVLDAGYDVVNGNGQHLKEAFDELSKALRLSADRGVHTREQMTAIIENLSS 209
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + V Q+ + + S Q+ + + +E +
Sbjct: 210 LLDAAAKNDSTLRQFGSTVRQLSQIMANEGFGSGTSGQQLNALIQRTGDILNANREAIAR 269
Query: 281 -IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
I + + S + + ++ ++ + R + + ++ +
Sbjct: 270 GIANGNTTIQSVVDRQREVTEFFDVLPLMADNLYNAVDRRNGSIRAHQLTDRMIFDSQFG 329
Query: 340 SNLNDSSQ 347
+ +
Sbjct: 330 KEVCNLMG 337
>gi|326382397|ref|ZP_08204089.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199127|gb|EGD56309.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 331
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 30/90 (33%), Gaps = 3/90 (3%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
++ + P +V + GL + VR GI GR+ + L K +
Sbjct: 35 IAGAVYISPPGQKVYSAHLVNTGGLESGDQVRIAGIRQGRVSSVDLTG---TVITVKFRL 91
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ TA +R G ++L
Sbjct: 92 DDSVSVRSDATAAVRLITPIGGRVLDLDPG 121
>gi|229490675|ref|ZP_04384513.1| secreted protein [Rhodococcus erythropolis SK121]
gi|229322495|gb|EEN88278.1| secreted protein [Rhodococcus erythropolis SK121]
Length = 453
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 7/105 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GL +L D +++ G+ L ++ V+ G+ VG +
Sbjct: 12 VLGLVFFVVLALFLAFTIGTFNKTFKDVVKIDLVTDTVGNA--LPPNADVKVRGLLVGEV 69
Query: 69 VGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ I PD + + TA + + L G Y
Sbjct: 70 RS---ASTKDGQVTSVLAIEPDKADLIPSNVTARLLPKTLFGERY 111
>gi|217969739|ref|YP_002354973.1| methyl-accepting chemotaxis sensory transducer [Thauera sp. MZ1T]
gi|217507066|gb|ACK54077.1| methyl-accepting chemotaxis sensory transducer [Thauera sp. MZ1T]
Length = 555
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/209 (12%), Positives = 73/209 (34%), Gaps = 5/209 (2%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q EN +V+ KS+ VR T + + + KI + + +
Sbjct: 316 QNTENARVTDGMASKSAADAGEGGDAVRATVEAMRSIADKIGIVDDI--AYQTNLLALNA 373
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
A + + + E+ ++ I + + ++++ L+ +I +
Sbjct: 374 AIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGELAGSSVKTAERAGALLEQI--VP 431
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
++++ L ++ + + +IN + I Q + + ++ ++
Sbjct: 432 SIRKTAELVQEITASSEEQSAGAGQINIAMSQISQTTQQNASAS-EELSATAEEMNSQAE 490
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ F +PQ + G + G+ + +
Sbjct: 491 QLQRLVAQFRLDPQAQLAGGDGGAARTTR 519
>gi|225010767|ref|ZP_03701236.1| Mammalian cell entry related domain protein [Flavobacteria
bacterium MS024-3C]
gi|225005138|gb|EEG43091.1| Mammalian cell entry related domain protein [Flavobacteria
bacterium MS024-3C]
Length = 333
Score = 54.2 bits (127), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 3/76 (3%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
+L S ++ ++ V GL ++V NG VG++ + + L
Sbjct: 26 YLKSSPLFENNKTLYVVYHH--VGGLQPGTAVSINGFTVGKVNDVGFL-DASGDLLVTFS 82
Query: 87 IRPDTPLYPSTTATIR 102
+ ++TA +
Sbjct: 83 VDDSFSFSKNSTAELY 98
>gi|117164591|emb|CAJ88137.1| putative secreted protein [Streptomyces ambofaciens ATCC 23877]
Length = 420
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/129 (11%), Positives = 37/129 (28%), Gaps = 8/129 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
G+ + + + + D V G+ + + V+ G+ VG +
Sbjct: 16 LAGVVFLVVPALLVWLAIAVYDKRFTDSDPVVVEAASVGN--EMHLGAEVKLRGVVVGEV 73
Query: 69 VGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIF 125
+ + + +RP + A + L G ++ + + +
Sbjct: 74 REIDATDDG---ARLTLALRPGALADIPADVRAQMLPTTLFGERFVALVPPASPSAQPLA 130
Query: 126 QIATERNQR 134
A R
Sbjct: 131 AGAVIPQDR 139
>gi|226305214|ref|YP_002765172.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226184329|dbj|BAH32433.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 453
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 34/105 (32%), Gaps = 7/105 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GL +L D +++ G+ L ++ V+ G+ VG +
Sbjct: 12 VLGLVFFVVLALFLAFTIGTFNKTFKDVVKIDLVTDTVGNA--LPPNADVKVRGLLVGEV 69
Query: 69 VGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ I PD + + TA + + L G Y
Sbjct: 70 RS---ASTKDGQVTSVLAIEPDKADLIPSNVTARLLPKTLFGERY 111
>gi|161613636|ref|YP_001587601.1| hypothetical protein SPAB_01360 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161363000|gb|ABX66768.1| hypothetical protein SPAB_01360 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 846
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 31/88 (35%), Gaps = 9/88 (10%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYP 78
+ W + Y V I S DG+ + VR+ G+ VG + + L ++
Sbjct: 1 MIAGWLVW----DSYQDRGNSVTIDF-MSADGIVPGRTPVRYQGVEVGTVEDVSLSKD-L 54
Query: 79 NHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ I+ D L T + T
Sbjct: 55 RKIEVRVSIKSDMEDALREETQFWLVTP 82
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 726 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 784
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 785 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 839
>gi|296163928|ref|ZP_06846564.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900709|gb|EFG80079.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 405
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 52/147 (35%), Gaps = 5/147 (3%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
GL + ++ + W+ + P + S L + V +NG+ +GR+
Sbjct: 17 LAGL-ALWLITAVVLIVVWV-QFRGGFTPKITLTALASRSGLVLDRGAKVTYNGVEIGRV 74
Query: 69 VGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
+ ++++ + I P + + A I + G Y+ LS+ ++
Sbjct: 75 GSISEVERDGKPAAKLLLEIAPKYAGLIALNVNAEITATTVFGNKYVSLSSPKQPVARKV 134
Query: 126 QIATERNQRAMITATPSGINYFISNAE 152
A R+ T + + +E
Sbjct: 135 TPADIIVVRSETTEFNTLFETVMQISE 161
>gi|282866017|ref|ZP_06275065.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
gi|282559056|gb|EFB64610.1| virulence factor Mce family protein [Streptomyces sp. ACTE]
Length = 430
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 44/125 (35%), Gaps = 10/125 (8%)
Query: 16 SILFFSFFSIYWLSR--SNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLF 72
+ WLS + A V +R GSV + ++ V+ G+ VG++ +
Sbjct: 16 VAFVLVPAVLVWLSVSVYEKKFTDDATVTVR-TGSVGNEMHDNADVKLRGVVVGQVRDIR 74
Query: 73 LDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIAT 129
D E + I PD + +A + L G ++ + +T+ A
Sbjct: 75 TDGEG---ARLTLAIEPDRLGQIPADVSAQMLPTTLFGERFVALVPPPVPSAQTLRAGAE 131
Query: 130 ERNQR 134
R
Sbjct: 132 IPQDR 136
>gi|324999494|ref|ZP_08120606.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 413
Score = 53.8 bits (126), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/355 (12%), Positives = 111/355 (31%), Gaps = 10/355 (2%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PL 93
+ I +P S +G V G PVGR+ + L+ +L I D PL
Sbjct: 29 RSSGYRLDIVMP-SAEGTFAGDEVAIGGRPVGRVTKVGLEGP---RALVSVEIDDDVAPL 84
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ T A I + + Y+EL I + + +
Sbjct: 85 HEGTGARITWEAVISDRYVELLPGPAGNPDIPSGGRIESDIERVEVDKVLATLDPETMDR 144
Query: 154 TSKKISDSSRHIQKIIENIEKPLTT---TIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ ++ ++ L T + + + + ++ I ++ + +
Sbjct: 145 IGSTVRQLDSTLEGREGDLNATLATGGPAVQALGEVVRAVGSDGPAIRSLVTELRGITTT 204
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ ++ T A +++Q + + + + + ++ V +
Sbjct: 205 LNERDESLRGTIGDLGAVTSSVATREGELSQSVAELPSTLDAADSTFGKIPGAVDEAVPL 264
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKE--TSAFLENIADSTSNMRSSISAIREITDQRQKI 328
T Q +++ + + S ++ + + + S + + I +
Sbjct: 265 LDTLQPATRRLPEVARNLSPVLQELRPAVADLRPTLVAAQSLLDRTPRLIDGANEALPAA 324
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTS 383
++ + L + + A ++ +I A +++ F A + TS
Sbjct: 325 TDIVSRARPAVAFLRPYAPETAGWLANWGSIWAGQDSTGNFARALLTEGSTSVTS 379
>gi|291004490|ref|ZP_06562463.1| putative Mce family protein [Saccharopolyspora erythraea NRRL 2338]
Length = 451
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 35/103 (33%), Gaps = 3/103 (2%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G+ + + + + +V++ + L DS V+ G+ VGR+
Sbjct: 8 LLGVAFLMTIVLFLSLTV--ATYQRAFTSSVDVVLHTASVGNQLMADSDVKVRGMIVGRV 65
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + + L + +A + + L G Y
Sbjct: 66 REIEPTADG-AKLHLALEPDKASRLPANVSARLLPRTLFGERY 107
>gi|299065826|emb|CBJ37005.1| putative paraquat-inducible protein B (pqiB) [Ralstonia
solanacearum CMR15]
Length = 558
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 46/511 (9%), Positives = 125/511 (24%), Gaps = 85/511 (16%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + SI ++ + GP + +GL + VR+N + +G + + L
Sbjct: 46 LVPLLAALVSIGLVAGQVRGHGPAITLG---FQDGEGLEPGKTPVRYNDVDIGMVTAIRL 102
Query: 74 DQEYPNHSLAKALIRPD-------------TPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ + L + + + L TYI +
Sbjct: 103 ATD-LSRVLVTVQLNQEAADFATHGTRFWIVRPRADMSGASGLGTLLSGTYIGADSGGSR 161
Query: 121 KKTIFQIATERNQRAMITAT--------PSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ E + PS + + +
Sbjct: 162 EPETQFTGLETPPVVSLRQQGARFVLRGPSLGSVETGSPVYYRHVEVGQVTGTALDKDGA 221
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ + H + ++++ + I +
Sbjct: 222 GVTIDVFVEAPYHRYVGRDTQWRHASGLGLRLDAAGLRVNAESFQAMLLGGIAFQPSPNQ 281
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID---------- 282
+ + ++Q + D+ +TV + + VG +D
Sbjct: 282 PAGDTVPDGTVFSLQSGDLDAADDLDRKPSTVVMHFDQSLHGLSVGAAVDFRGVQLGEVT 341
Query: 283 --------HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ + + S ++ T + + + T
Sbjct: 342 NVGVAFDPKTHAFVMPVTLNLYPDRLGQAFRASAEYGDAAAGKALLRTLVARGLRGQLRT 401
Query: 335 IENITSNLNDSS------------------------QKFAELMSKINNISALKE---NNS 367
+T+ L + +L ++I +++ + +
Sbjct: 402 GNLLTNQLYVALDMFPNAPPVQLDLNRTLIALPTIPNTLDDLQAQIADLAKTLDRVPLDQ 461
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL--------------NDIQNLVR 413
L + + R + + ++ D+ +
Sbjct: 462 LGTHLGQRLDDARRLFALTDAQLAPQARATLAAARQAFDAAQAIAQSPLLRPADLSRVRE 521
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+L +T+ D + ++P+ +VWG +
Sbjct: 522 QLVQTLRALDTLADTVAQHPESLVWGPAVDT 552
>gi|315445479|ref|YP_004078358.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315263782|gb|ADU00524.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 399
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 87/280 (31%), Gaps = 5/280 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + +++ +V L ++S V + + VG + + D H+ +
Sbjct: 36 LPGTVGTGSDAVVYRVQL-ANVGSLESNSPVMLDDVVVGAVGRMTFD---DWHAEVDISV 91
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS-GINY 146
RPD + + AT+ L G +I L E T + PS
Sbjct: 92 RPDVVVPANAVATVGQTSLLGSMHIALDPPVGEPPTGRLAPGANLPLNRTSTYPSTEQTL 151
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ ++ I ++ + + ++ V+ D + T
Sbjct: 152 SSLSVVVNGGGLTQIGDIISNFSAALDGRQGQIRSLLTRMNDVVGVLDGQRDNINATISA 211
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S++ + + ++ +I+ ++ + ++ + + D
Sbjct: 212 LYRLSETLAGQREVLTAALKRIPEALEVLNRERPRIVTAMRKLGDFSDTATQLIDESQED 271
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + + + + D ++ + T + + D
Sbjct: 272 IVGNLRNLEPAVRALADVGPDLATALSYLPTYPYTQEFID 311
>gi|311741976|ref|ZP_07715786.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311314469|gb|EFQ84376.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 388
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 37/115 (32%), Gaps = 8/115 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME S G F+ ++ + ++ + + L++ ++V+
Sbjct: 1 MEQTKKLISGGAFIGIVVLIAVATVM---SYQGKFTSTQPFTVASDRAGLTLTSGAAVKL 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
G+ VG + + + + + D + T I G Y++
Sbjct: 58 RGVQVGNVSSVEPAADG---ATINLDVYSDKVDLMTSDLTVQIVPPTAFGAKYVQ 109
>gi|226349635|ref|YP_002776749.1| putative Mce family protein [Rhodococcus opacus B4]
gi|226245550|dbj|BAH55897.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 387
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 7/112 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
S+ Y ++GL +V+ + + ++ V + + L S V+
Sbjct: 8 RSRRAYVALGLVMVA--VGALATATSIAVYRGSFTSAVPVKLYSTRAGLMLEPGSDVKMR 65
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ VGR+ G+ L H+ I + + +A I L G +
Sbjct: 66 EVVVGRVTGVKLV---DGHAEISMDIDKGRAHSIAANVSAAIDPTTLFGRKF 114
>gi|183219618|ref|YP_001837614.1| hypothetical protein LEPBI_I0193 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909757|ref|YP_001961312.1| ABC transporter substrate binding protein [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167774433|gb|ABZ92734.1| Substrate binding protein of an ABC transporter complex [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167778040|gb|ABZ96338.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 264
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 52/157 (33%), Gaps = 16/157 (10%)
Query: 1 MESKN--YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+SK T G+ SIL F+FF+ + ++ + +DG+ + V
Sbjct: 1 MKSKKINNETITGIIFFSILVFAFFTTVI--QPDRPTKKYPYRLSLFYSRIDGIKEGTEV 58
Query: 59 RFNGIPVGRIVGLF------------LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
R GIP G + + LD + + L+ + +T L
Sbjct: 59 RILGIPKGYVAHIDSRPLIDVPDRRFLDHNMDHAIELHIALEDPLTLWDNYEVDFQTITL 118
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
I ++ + K F T R PS
Sbjct: 119 FSGRIININPGSSDGKRPFFKPTFREGEKSPDYLPSA 155
>gi|291298697|ref|YP_003509975.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
gi|290567917|gb|ADD40882.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
Length = 377
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G +V I V L S+V+ + + VG++ + + + + K + D
Sbjct: 28 GGEGGDGYQVAIEF-ADVTDLVPYSTVKVDDVTVGQVEEITVSE--KWTAKVKIRVNDDV 84
Query: 92 PLYPSTTATIRTQGLAGITY 111
L + A +R L G +
Sbjct: 85 ELPRNAIAALRQTSLLGEKF 104
>gi|312138210|ref|YP_004005546.1| mce family protein mce2a [Rhodococcus equi 103S]
gi|325674884|ref|ZP_08154571.1| virulence factor Mce family protein [Rhodococcus equi ATCC 33707]
gi|311887549|emb|CBH46861.1| putative Mce family protein Mce2A [Rhodococcus equi 103S]
gi|325554470|gb|EGD24145.1| virulence factor Mce family protein [Rhodococcus equi ATCC 33707]
Length = 392
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/154 (11%), Positives = 44/154 (28%), Gaps = 7/154 (4%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
E++ +V L + V G V + D+ V+
Sbjct: 3 EARWKTKLAAAVMVLSLVAIVVVALTMFVGGFTKSESVLVTAPRSGLV--MDPDAKVKMR 60
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VG++ + + + + + P + + T I + + G ++
Sbjct: 61 GVQVGKVGSVSYTGDG---AELQLDMDPSMMSKIPANATVEIDSTTVFGAKFVNFVVPED 117
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
Q T + ++ + + +
Sbjct: 118 PSPQSLQPGTVISADSVTVEFNTLFQHLTEVLDQ 151
>gi|118469727|ref|YP_887179.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118171014|gb|ABK71910.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 396
Score = 53.8 bits (126), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/280 (10%), Positives = 84/280 (30%), Gaps = 5/280 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + A ++I +V L +S V + + VG + + L H+ + +
Sbjct: 34 LPGTVGTGSDAATFHVQI-ANVGTLEPNSPVMIDDVVVGAVRRMTLAG---WHADVEVSV 89
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS-GINY 146
+PD + + AT+ L G ++ L + T PS
Sbjct: 90 QPDVVVPANAVATVGQTSLLGSMHLALDPPVDSAPEGRLAPGATIPLSRSTTYPSTEQTL 149
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + + ++ + ++ V+ + D ++ T
Sbjct: 150 SSLSLVVNGGGLMQIADIVHNFSAALDGRAVEIRDLLTRMNNVVGILDNQRDNIVATIAA 209
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + + + + QI + + + ++ D
Sbjct: 210 MNRVAGTFAAQRSTLTEALDRIPPALEVLASQRPQITTAMNKLGAFSDIAHRLINDSQAD 269
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + + + + +D + + T + ++ D
Sbjct: 270 LVRNLKNLEPTVKALADVGTDLVTALSYLPTYPYTQDFID 309
>gi|229529227|ref|ZP_04418617.1| paraquat-inducible protein B [Vibrio cholerae 12129(1)]
gi|229333001|gb|EEN98487.1| paraquat-inducible protein B [Vibrio cholerae 12129(1)]
Length = 510
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/375 (7%), Positives = 97/375 (25%), Gaps = 33/375 (8%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQGLA 107
LS V + G VGR+ D E D + + + +
Sbjct: 168 AGKLSVGDPVMYEGFTVGRVESTLFDVESKKAQYQLFIFAPYDKLVNTRSFFWLNSGINL 227
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ L +++ + + + + +
Sbjct: 228 QLNAEGLEFSLGSIESLLKGGVTFG-----------------QLQEDDSGQQITQQMTEF 270
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++ + K + + ++ + K + + + T+
Sbjct: 271 LLFDDVKQIREGMYGDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVY 330
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + L ++ + + ++ + + + + L D
Sbjct: 331 INIKRIPVLVRIELGRLYDNFGTTDLPNLKKRMQDEFAKGLKASLKTGNLVT--GALYID 388
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + +++ + + ++ + + + S LN + +
Sbjct: 389 TDYFPDEPADPLTQFDGYPMFPTKQGGFAEVQKQVTELLRKLNGLPMDDTLAS-LNSTLK 447
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
L++ I +E +L D Q ++ T + +
Sbjct: 448 TSEALLASAERILKKQETQNLPADIQASLKQLETTLGGFGPE------------STVYRE 495
Query: 408 IQNLVRKLQETVNHF 422
++ +R+L + +
Sbjct: 496 LETTLRELNQVMARI 510
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 8/60 (13%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH--------SLAKALI 87
G E ++ SV GL + V + G+ +G + + L E N L + +
Sbjct: 285 GDYIEFVMMFDESVRGLKPLAPVEYRGLRIGTVTKIPLKTESSNVYINIKRIPVLVRIEL 344
>gi|254458635|ref|ZP_05072059.1| hypothetical membrane protein [Campylobacterales bacterium GD 1]
gi|207084401|gb|EDZ61689.1| hypothetical membrane protein [Campylobacterales bacterium GD 1]
Length = 306
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 42/315 (13%), Positives = 87/315 (27%), Gaps = 15/315 (4%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+VG+FV+S+ +Y + S S ++F+G +G
Sbjct: 2 KLAVGIFVISLFITIITFLYLVLEDKGTFNKRYNYHFT-TDSASFFSVGMPLKFSGFDIG 60
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLY-PSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
I + L + + T + + L G +IE+ + +
Sbjct: 61 VIDNISL--NDDGTVYMTFSVDEHNRRWMTDGTVLMIIKPLIGSAHIEVYS-------VI 111
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ IN IS E KI +I I I K + + ++
Sbjct: 112 DNEVLEADAELQMLQNDDINDMISKLEPAVNKIISIINNIDAITAYIAKDDSDLMLTLQN 171
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
I A+ + + T + + N T+++ L + I
Sbjct: 172 IKKFTADLSNSDSLLTSITGDKKSTQSIIASLNKTTEIMKEL----QKISKDISKTTSTL 227
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ ++ + DV++ + + D + S N
Sbjct: 228 DSSIVTPASSAIKELDKIMKDVKQKLDALDGTVKAVGTYDKDLVDLKEQISVSVQKSNQI 287
Query: 306 DSTSNMRSSISAIRE 320
+ +E
Sbjct: 288 MDKVDALMQDEQKQE 302
>gi|169631673|ref|YP_001705322.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243640|emb|CAM64668.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 510
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 40/101 (39%), Gaps = 3/101 (2%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
G+ V++IL + L++S Y +V ++ DGL + V+F G+ VG
Sbjct: 22 LLAGVAVLAILGLVTGLL--LAKSKGYLEDTVKVDAQLMNVGDGLPERADVKFRGMLVGA 79
Query: 68 IVGLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ + ++ PN + + TA + +
Sbjct: 80 VTSVTPAEDGKPNIVHIDLKSEHAGGIPSTVTARVVPSNVF 120
>gi|145219303|ref|YP_001130012.1| hypothetical protein Cvib_0488 [Prosthecochloris vibrioformis DSM
265]
gi|145205467|gb|ABP36510.1| Mammalian cell entry related domain protein [Chlorobium
phaeovibrioides DSM 265]
Length = 293
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN- 79
+ + + +++ + V + + G++ GL+ ++ V +G VG + + + +
Sbjct: 25 AAYLGLVIGKNSSLFTGVTTVKV-LAGNMHGLAENNFVSVSGKKVGTVSKMEFVGSHDSL 83
Query: 80 HSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRK 119
+ +A +R + + + ATI++ G+ G Y++++T +
Sbjct: 84 YVVADLRLRKEFAGLVTKDSKATIKSLGVLGDKYVDITTGKG 125
>gi|54027081|ref|YP_121323.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018589|dbj|BAD59959.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 446
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/261 (9%), Positives = 79/261 (30%), Gaps = 7/261 (2%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
W + + V + + G L+ ++ V+ G+ VG + +
Sbjct: 25 ALFLWTTVAIYNKQFTRSVEVELITDSVGNALTRNADVKVRGVTVGEVRS---SRAGDGD 81
Query: 81 SLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ + I PD + + TA + + L G Y++L + +Q
Sbjct: 82 VVLRLAIDPDKAEQIPANATARLLPKTLFGERYVDLVIPADPSPQRLRDGVTLHQDRSGN 141
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
A + D + + + + + +I+ + T+ + +
Sbjct: 142 AIEISKLLDDLLPLLQAIPPQDLAATLGALSQALAGQGAMLGESIDKLDTIFRDVNGVLP 201
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
++ + ++ + + A +Q+ + I + +++D
Sbjct: 202 ELQEGLRSFAETAAIYSDAAPQLVTALDNLRTTNATIVQRRSDIDALYATLTPASTRTAD 261
Query: 259 QVINTVHDVRETTQTFQEVGQ 279
+ ++ + + +
Sbjct: 262 FLAANRDNIIDVAADSRPALE 282
>gi|296169583|ref|ZP_06851203.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895849|gb|EFG75544.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 441
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 32/307 (10%), Positives = 88/307 (28%), Gaps = 19/307 (6%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQY----------DGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+F + + + + N V I +V L ++S V +
Sbjct: 10 MFALCSVVMLAVTGCAFNGLNSLPLPGAVGRGPGANTYHVEIA---NVGTLESNSPVMID 66
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI--ELSTLRK 119
+ VG I + + H+ + + PD + + A++ L G ++ +
Sbjct: 67 DVIVGSISKMTV---RGWHADVEISVNPDVVVPANVVASVGQTSLLGSMHMELNPPPGQP 123
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + A+ RA + + + S + S I +
Sbjct: 124 GRGRLQPGASIPLNRASTYPS-TEQTLSSLSVVINSGGLGQISDIIHNFNAALSGRGGAV 182
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + + D ++ + Q + + + + +
Sbjct: 183 RDVLVRLDKFVRTFDQQRDDLVASLQALNRLAGTFAGQRDAITQALRKIPPALDVLISER 242
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+I+ + ++ V + D+ + Q + + + D + +
Sbjct: 243 PRIVTALDKLRVFSDTAARLVNDAGGDLVKNLQNLEPTIGALADVGPDLDAAIAYATLFP 302
Query: 300 FLENIAD 306
+ +N D
Sbjct: 303 YTQNFVD 309
>gi|108797255|ref|YP_637452.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866340|ref|YP_936292.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108767674|gb|ABG06396.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692429|gb|ABL89502.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 395
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/281 (8%), Positives = 78/281 (27%), Gaps = 3/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S + G V + L + V+ G V ++ D+ V+
Sbjct: 1 MKSISARNVAGTLAVVYIAAIVALAVGLFNGSFTRSATVTVVSDRVGLV--MNPDAKVKL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRK 119
+G VG++ + + + + + + + G +E +
Sbjct: 59 HGAQVGKVAAIEALPDGRAAIRLAMDPSQLAIIPSNVLVNVGSTTVFGSKAVELVPPANP 118
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + A+ K++++ + + + + T
Sbjct: 119 SPDPLRAGQVLDAGHVTVEINTVFEQLVSVLAKVEPAKLNETLGALSQGLAGRGEKFGRT 178
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +++T+ L ++ ++ + + ++ T S +
Sbjct: 179 LVDLDTLLADLDPSMDNLSRDIAVAPGVLNAYADAAPDLLATADNASRISDTLVERQSDL 238
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ +L + + DV ++ +
Sbjct: 239 DALLVSAIGLAEVGNDVVATNRGAFTDVMRLLVPTTDLTNQ 279
>gi|227328621|ref|ZP_03832645.1| hypothetical protein PcarcW_15311 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 879
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 8/92 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + IY V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLIY-----TNQQERGTTVTIDFV-SADGIVAGRTPVRYQGVEVGTVQNIKL 81
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
++ A L T + T
Sbjct: 82 SEDLRTIQVEASIKSDMKEALRSGTQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 24/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F GI VG + GL L + I + ++ + +
Sbjct: 756 AGALQVGTPVLFRGIEVGTVTGLSL-GTLSDRIAVSLRISKRYQHLVRDNSVFWLASGYN 814
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P N K
Sbjct: 815 LEFGLTGGVIKSGTFQQFIRGGIAFATPPSTPLAPKAQEGKHFLLRNEEPKEWRQ 869
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ + V +G+ VG++V LD++ + L R L+ + + ++
Sbjct: 405 GIDSGQPVLLHGVQVGQVVKRTLDEQGVSFLLV-IEPRYRQLLHRDSKFIVNSR 457
>gi|315442436|ref|YP_004075315.1| ABC-type transporter involved in resistance to organic solvents,
periplasmic component [Mycobacterium sp. Spyr1]
gi|315260739|gb|ADT97480.1| ABC-type transport system involved in resistance to organic
solvents, periplasmic component [Mycobacterium sp.
Spyr1]
Length = 547
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/115 (15%), Positives = 41/115 (35%), Gaps = 2/115 (1%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
V V ++ + + + + D P V+ + DGL S V+++G+ V
Sbjct: 15 RQLLVAGTAVMVVAALVTAGLLVKATGRLD-PFVRVVADLVNVGDGLPQRSDVKYHGVLV 73
Query: 66 GRIVGLFLDQ-EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G + + PN + + + TA + + ++ ++L
Sbjct: 74 GAVDSVTPAAHGDPNFVHINLNPQYADAIPANVTARVVPSNVFAVSSVQLVDNGP 128
>gi|294828015|ref|NP_712236.2| MCE-like protein [Leptospira interrogans serovar Lai str. 56601]
gi|293385861|gb|AAN49254.2| MCE-related protein [Leptospira interrogans serovar Lai str. 56601]
Length = 249
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 15/125 (12%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
Y VG+ + + ++ + + + +G+ + V G+P
Sbjct: 5 RYLLVGIIFTAAIT-VVGYFTIITEGGPIKKKGEFMKVTF-RNAEGIKVGNKVTVQGVPF 62
Query: 66 GRIVGLFL---DQEYP----------NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
G + + L D+ L+R LY + I+ + L I
Sbjct: 63 GYVSAIRLIQIDENGTEVQSGEMGIGTRVEITMLLREKISLYDNYDIIIKNESLLTGRVI 122
Query: 113 ELSTL 117
+
Sbjct: 123 AIDPG 127
>gi|51596704|ref|YP_070895.1| hypothetical protein YPTB2380 [Yersinia pseudotuberculosis IP
32953]
gi|51589986|emb|CAH21618.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP
32953]
Length = 883
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 17 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 69 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMKDSLREGTQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 31/372 (8%), Positives = 91/372 (24%), Gaps = 13/372 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 227
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 228 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 284
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 285 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 344
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 345 SPRISLSNANVSELLTGNTLELIPGDGEPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYG 404
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 405 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 464
Query: 346 SQKFAELMSK--INN--ISALKENNSLFKDAQRAMHT---FRDTSEKINRYIPSIGNNLQ 398
++ I+ + + A+ + ++ + + S
Sbjct: 465 GVNVQGASAQEWIDGGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTL 524
Query: 399 NFSQSGLNDIQN 410
+ S L DIQ
Sbjct: 525 TLTASSLPDIQA 536
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 762 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 820
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 821 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 875
Score = 39.9 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 648 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 680
>gi|240169178|ref|ZP_04747837.1| virulence factor Mce family protein [Mycobacterium kansasii ATCC
12478]
Length = 387
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 41/118 (34%), Gaps = 14/118 (11%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDG 51
M ++ + + V++ + + L + + ++P V+
Sbjct: 1 MTMRS-WRRIPAAVLTCILAATAVAGCGWRGLNSLPLPGTEGGGPGAYTIQAQMPD-VNN 58
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+ +S VR + VG + + H+L + D L ++T T+ L G
Sbjct: 59 IQPNSRVRVGDVTVGTVTKIE---RQDWHALVTMKLNGDVTLPANSTVTLGQTALLGS 113
>gi|15607731|ref|NP_215105.1| MCE-family protein MCE2C [Mycobacterium tuberculosis H37Rv]
gi|148660361|ref|YP_001281884.1| MCE-family protein Mce2C [Mycobacterium tuberculosis H37Ra]
gi|148821794|ref|YP_001286548.1| MCE-family protein mce2C [Mycobacterium tuberculosis F11]
gi|215402359|ref|ZP_03414540.1| MCE-family protein mce2C [Mycobacterium tuberculosis 02_1987]
gi|215410132|ref|ZP_03418940.1| MCE-family protein mce2C [Mycobacterium tuberculosis 94_M4241A]
gi|215444704|ref|ZP_03431456.1| MCE-family protein mce2C [Mycobacterium tuberculosis T85]
gi|218752232|ref|ZP_03531028.1| MCE-family protein mce2C [Mycobacterium tuberculosis GM 1503]
gi|253797526|ref|YP_003030527.1| MCE-family protein mce2C [Mycobacterium tuberculosis KZN 1435]
gi|254363550|ref|ZP_04979596.1| MCE-family protein mce2C [Mycobacterium tuberculosis str. Haarlem]
gi|254549547|ref|ZP_05139994.1| MCE-family protein mce2C [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289552844|ref|ZP_06442054.1| MCE-family protein mce2C [Mycobacterium tuberculosis KZN 605]
gi|289744305|ref|ZP_06503683.1| MCE-family protein mce2c [Mycobacterium tuberculosis 02_1987]
gi|289756670|ref|ZP_06516048.1| MCE-family protein mce2C [Mycobacterium tuberculosis T85]
gi|289760711|ref|ZP_06520089.1| MCE-family protein mce2C [Mycobacterium tuberculosis GM 1503]
gi|294996104|ref|ZP_06801795.1| MCE-family protein mce2C [Mycobacterium tuberculosis 210]
gi|297633086|ref|ZP_06950866.1| MCE-family protein mce2C [Mycobacterium tuberculosis KZN 4207]
gi|297730064|ref|ZP_06959182.1| MCE-family protein mce2C [Mycobacterium tuberculosis KZN R506]
gi|298524078|ref|ZP_07011487.1| MCE-family protein mce2C [Mycobacterium tuberculosis 94_M4241A]
gi|306774696|ref|ZP_07413033.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu001]
gi|306794370|ref|ZP_07432672.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu005]
gi|306796340|ref|ZP_07434642.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu006]
gi|306802199|ref|ZP_07438867.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu008]
gi|306806407|ref|ZP_07443075.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu007]
gi|306970800|ref|ZP_07483461.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu010]
gi|307078523|ref|ZP_07487693.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu011]
gi|313657391|ref|ZP_07814271.1| MCE-family protein mce2C [Mycobacterium tuberculosis KZN V2475]
gi|2222767|emb|CAB09961.1| MCE-FAMILY PROTEIN MCE2C [Mycobacterium tuberculosis H37Rv]
gi|134149064|gb|EBA41109.1| MCE-family protein mce2C [Mycobacterium tuberculosis str. Haarlem]
gi|148504513|gb|ABQ72322.1| MCE-family protein Mce2C [Mycobacterium tuberculosis H37Ra]
gi|148720321|gb|ABR04946.1| MCE-family protein mce2C [Mycobacterium tuberculosis F11]
gi|253319029|gb|ACT23632.1| MCE-family protein mce2C [Mycobacterium tuberculosis KZN 1435]
gi|289437476|gb|EFD19969.1| MCE-family protein mce2C [Mycobacterium tuberculosis KZN 605]
gi|289684833|gb|EFD52321.1| MCE-family protein mce2c [Mycobacterium tuberculosis 02_1987]
gi|289708217|gb|EFD72233.1| MCE-family protein mce2C [Mycobacterium tuberculosis GM 1503]
gi|289712234|gb|EFD76246.1| MCE-family protein mce2C [Mycobacterium tuberculosis T85]
gi|298493872|gb|EFI29166.1| MCE-family protein mce2C [Mycobacterium tuberculosis 94_M4241A]
gi|308216594|gb|EFO75993.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu001]
gi|308337266|gb|EFP26117.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu005]
gi|308343191|gb|EFP32042.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu006]
gi|308347059|gb|EFP35910.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu007]
gi|308351002|gb|EFP39853.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu008]
gi|308359590|gb|EFP48441.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu010]
gi|308363518|gb|EFP52369.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu011]
gi|323720944|gb|EGB30009.1| MCE-family protein mce2C [Mycobacterium tuberculosis CDC1551A]
gi|326902423|gb|EGE49356.1| MCE-family protein mce2C [Mycobacterium tuberculosis W-148]
gi|328457309|gb|AEB02732.1| MCE-family protein mce2C [Mycobacterium tuberculosis KZN 4207]
Length = 481
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 72/249 (28%), Gaps = 5/249 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ + G++T V G+ VG + L + L + P + +
Sbjct: 39 TPTYYAQFADT-GGINTGDKVEIAGVNVGLVRSLAIRGN---RVLIGFSL-PGKTIGMQS 93
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A IRT + G +E+ E + ++ +
Sbjct: 94 RAAIRTDTILGRKNLEIEPRGSEPLKPNGFLPLAQTTTPYQIYDAFVDVTKAATGWDIDA 153
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ S + + + L+ + ++ S + I++++ ++
Sbjct: 154 VKRSLNVLSETFDQTAPHLSAALEGVKAFSDTVGRRGEQIEQLLANANRIARVLGDRSEQ 213
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ Q + +L N+ +S N H + + +E+
Sbjct: 214 VNGLLVNAKTLLAAFKQRSQALRILLTNVSEASAQVSGLITDNPNLNHVLAQLRTVSEEL 273
Query: 278 GQKIDHLLS 286
++ + L
Sbjct: 274 VKRKNELAD 282
>gi|215425823|ref|ZP_03423742.1| mce-family protein mce2C [Mycobacterium tuberculosis T92]
gi|215429424|ref|ZP_03427343.1| mce-family protein mce2C [Mycobacterium tuberculosis EAS054]
gi|219556433|ref|ZP_03535509.1| mce-family protein mce2C [Mycobacterium tuberculosis T17]
gi|260185468|ref|ZP_05762942.1| MCE-family protein [Mycobacterium tuberculosis CPHL_A]
gi|260199595|ref|ZP_05767086.1| MCE-family protein [Mycobacterium tuberculosis T46]
gi|260203755|ref|ZP_05771246.1| MCE-family protein [Mycobacterium tuberculosis K85]
gi|289441980|ref|ZP_06431724.1| MCE-family protein mce2C [Mycobacterium tuberculosis T46]
gi|289446144|ref|ZP_06435888.1| MCE-family protein mce2C [Mycobacterium tuberculosis CPHL_A]
gi|289568524|ref|ZP_06448751.1| MCE-family protein mce2C [Mycobacterium tuberculosis T17]
gi|289573191|ref|ZP_06453418.1| MCE-family protein mce2C [Mycobacterium tuberculosis K85]
gi|289749088|ref|ZP_06508466.1| MCE-family protein mce2C [Mycobacterium tuberculosis T92]
gi|289752631|ref|ZP_06512009.1| MCE-family protein mce2c [Mycobacterium tuberculosis EAS054]
gi|289414899|gb|EFD12139.1| MCE-family protein mce2C [Mycobacterium tuberculosis T46]
gi|289419102|gb|EFD16303.1| MCE-family protein mce2C [Mycobacterium tuberculosis CPHL_A]
gi|289537622|gb|EFD42200.1| MCE-family protein mce2C [Mycobacterium tuberculosis K85]
gi|289542278|gb|EFD45926.1| MCE-family protein mce2C [Mycobacterium tuberculosis T17]
gi|289689675|gb|EFD57104.1| MCE-family protein mce2C [Mycobacterium tuberculosis T92]
gi|289693218|gb|EFD60647.1| MCE-family protein mce2c [Mycobacterium tuberculosis EAS054]
Length = 481
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 72/249 (28%), Gaps = 5/249 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ + G++T V G+ VG + L + L + P + +
Sbjct: 39 TPTYYAQFADT-GGINTGDKVEIAGVNVGLVRSLAIRGN---RVLIGFSL-PGKTIGMQS 93
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A IRT + G +E+ E + ++ +
Sbjct: 94 RAAIRTDTILGRKNLEIEPRGSEPLKPNGFLPLAQTTTPYQIYDAFVDVTKAATGWDIDA 153
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ S + + + L+ + ++ S + I++++ ++
Sbjct: 154 VKRSLNVLSETFDQTAPHLSAALEGVKAFSDTVGRRGEQIEQLLANANRIARVLGDRSEQ 213
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ Q + +L N+ +S N H + + +E+
Sbjct: 214 VNGLLVNAKTLLAAFKQRSQALRILLTNVSEASAQVSGLITDNPNLNHVLAQLRTVSEEL 273
Query: 278 GQKIDHLLS 286
++ + L
Sbjct: 274 VKRKNELAD 282
>gi|307131293|ref|YP_003883309.1| hypothetical protein Dda3937_04338 [Dickeya dadantii 3937]
gi|306528822|gb|ADM98752.1| conserved protein [Dickeya dadantii 3937]
Length = 876
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/133 (15%), Positives = 41/133 (30%), Gaps = 7/133 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + + L + Q G + S DG+ + VR+ G+ +G + +
Sbjct: 23 FWLLPFIAMLLAGWLLYTNQQERGATVTIDFV---SADGIVPGRTPVRYQGVEIGTVRNI 79
Query: 72 FLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQIA 128
L + +A L T + T LAG++ ++ +
Sbjct: 80 KLSDDLRTIQVIASIRNDMKEALRSGTQFWLVTPKASLAGVSGLDALVGGNYIGMLPGGG 139
Query: 129 TERNQRAMITATP 141
+ P
Sbjct: 140 DPASHFTAQDTQP 152
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRT 103
L + V F GI VG + GL L + R + ++ + +
Sbjct: 755 AGSLQVGTPVLFRGIEVGTVTGLSLGALSDRVSVAVRISKRHAHLVRDNSVFWLAS 810
>gi|49072914|gb|AAT51765.1| TrnC5 [Mycobacterium vanbaalenii PYR-1]
Length = 141
Score = 53.4 bits (125), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 7/109 (6%)
Query: 4 KNYYTSVGLFVVSILFFSFF---SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
+ + V+ L F + + L + + + +P V+ L +S VR
Sbjct: 8 RAAAVIMIALTVAGLSGCGFRGLNSFRLPGTQGHGQGSYTIQAEMPD-VETLQPNSRVRV 66
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+ VG + + H+L + D L ++T ++ L G
Sbjct: 67 GDVNVGTVTKIE---RRGWHALLTLALNGDVDLPANSTVSLGQTSLLGS 112
>gi|254818332|ref|ZP_05223333.1| hypothetical protein MintA_00310 [Mycobacterium intracellulare ATCC
13950]
Length = 428
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 37/315 (11%), Positives = 93/315 (29%), Gaps = 15/315 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-------DGPMAEVIIRIPGSVDGLS 53
M ++ V F V + N GP A + +V +
Sbjct: 1 MIARVAARRV--FTVGCCVVLTATGCAFHGLNSLPLPGAVGRGPGANIYHVELPNVGTME 58
Query: 54 TDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI- 112
++S V N + VG + + + H+ + ++ D + + AT+ L G ++
Sbjct: 59 SNSPVMINDVVVGSVGTMRVHG---WHADVEISVKRDVVVPANVVATVGQTSLLGSMHVE 115
Query: 113 -ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
++ + AT R+ + + A + I
Sbjct: 116 LNTPLGQQGSGRLQPGATIPLSRSSAYPS-TEQTLSSLGAVVNGGGLGQIGEVIHNFSAA 174
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ I + T + D ++ + Q S + +
Sbjct: 175 LSGHEGAVRDLITRLDTFVGTLDDQQDNIIASIQALNRLSATFADQRDVVTDALRKIPPA 234
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ +++ ++ + ++ V + D+ + + + + + DF +
Sbjct: 235 LEVLIKERPRLTAALDHLRVFSNTANRLVNDAQADLVRNLKNLEPTIKALADVGPDFGAA 294
Query: 292 MKSKETSAFLENIAD 306
+ + F +N D
Sbjct: 295 IAASFVFPFTQNFVD 309
>gi|254230930|ref|ZP_04924257.1| MCE-family protein mce2C [Mycobacterium tuberculosis C]
gi|124599989|gb|EAY58999.1| MCE-family protein mce2C [Mycobacterium tuberculosis C]
Length = 477
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 72/249 (28%), Gaps = 5/249 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ + G++T V G+ VG + L + L + P + +
Sbjct: 43 TPTYYAQFADT-GGINTGDKVEIAGVNVGLVRSLAIRGN---RVLIGFSL-PGKTIGMQS 97
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A IRT + G +E+ E + ++ +
Sbjct: 98 RAAIRTDTILGRKNLEIEPRGSEPLKPNGFLPLAQTTTPYQIYDAFVDVTKAATGWDIDA 157
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ S + + + L+ + ++ S + I++++ ++
Sbjct: 158 VKRSLNVLSETFDQTAPHLSAALEGVKAFSDTVGRRGEQIEQLLANANRIARVLGDRSEQ 217
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ Q + +L N+ +S N H + + +E+
Sbjct: 218 VNGLLVNAKTLLAAFKQRSQALRILLTNVSEASAQVSGLITDNPNLNHVLAQLRTVSEEL 277
Query: 278 GQKIDHLLS 286
++ + L
Sbjct: 278 VKRKNELAD 286
>gi|213418448|ref|ZP_03351514.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 485
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/332 (7%), Positives = 72/332 (21%), Gaps = 13/332 (3%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG 108
LS V F G VG + D + + T +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKR-----TMSYQLFIKAPNDRLVTSNVRFWKD 221
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
T + + + T E ++ ++
Sbjct: 222 SGIAVDLTSAGMRVEMGSLTTLFGG--------GVSFDVPEGLEQGQPVAEKTAFNLYDD 273
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++I+ L T + + + S + + +
Sbjct: 274 QKSIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDY 333
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
++ + ++ + + + + ++ + +D +
Sbjct: 334 RIPVLVRIEPERLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEP 393
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + S + I N S + ++
Sbjct: 394 PITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRR 453
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFR 380
+ +N I++ + L D Q +
Sbjct: 454 LQTTLDNMNKITSSQSMQQLPADMQTTLRELN 485
Score = 50.7 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 55/208 (26%), Gaps = 8/208 (3%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDYRI 335
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I P+ L + + A + P
Sbjct: 336 PVLVRIEPE-RLKAQLGENADVGAHLTELLKRGLRASLKTGNLVTGALYVDLDFYPKEPP 394
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
E S ++ Q+++E ++K + + +T + + +
Sbjct: 395 ITGLREFDGYEIIPTVSSGLAQIQQRLVETLDKINNLPLNPMIEQATNTLSESQRTMRRL 454
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDK 229
TT + S + + + + +
Sbjct: 455 QTTLDNMNKITSSQSMQQLPADMQTTLR 482
>gi|226361936|ref|YP_002779714.1| Mce family protein [Rhodococcus opacus B4]
gi|226240421|dbj|BAH50769.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 402
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 32/105 (30%), Gaps = 11/105 (10%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRI 68
G +V L F + + S GL + V+ NG+ +G++
Sbjct: 20 GAALVLGLAAILFGCLL--SFKGAFTSTVPLTVVSDRS--GLVMDQGAKVQLNGVQIGKV 75
Query: 69 VGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ + + + I L T A I+ G Y
Sbjct: 76 RDIDHVADG---ASLQLDIDEQWFGLLTADTVAEIKATTAFGSKY 117
>gi|281192551|gb|ADA57464.1| Mce [Leptospira borgpetersenii serovar Mini]
gi|281192561|gb|ADA57469.1| Mce [Leptospira interrogans serovar Wolffi]
Length = 251
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 15/125 (12%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
Y VG+ + + ++ + + + +G+ + V G+P
Sbjct: 7 RYLLVGIIFTAAIT-VVGYFTIITEGGPIKKKGEFMKVTF-RNAEGIKVGNKVTVQGVPF 64
Query: 66 GRIVGLFL---DQEYP----------NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
G + + L D+ L+R LY + I+ + L I
Sbjct: 65 GYVSAIRLIQIDENGTEVQSGEMGIGTRVEITMLLREKISLYDNYDIIIKNESLLTGRVI 124
Query: 113 ELSTL 117
+
Sbjct: 125 AIDPG 129
>gi|304396186|ref|ZP_07378068.1| Mammalian cell entry related domain protein [Pantoea sp. aB]
gi|304356555|gb|EFM20920.1| Mammalian cell entry related domain protein [Pantoea sp. aB]
Length = 877
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 9/92 (9%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLD 74
I + W Y + I DG+ + +R+ G+ VG + G+ L
Sbjct: 28 IIAMLIAGWLLW----ANYQERGTTITINFQT-ADGIVPGRTPIRYQGVEVGTVQGINLS 82
Query: 75 QEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ KA I+ D L T + T
Sbjct: 83 -DDYRRIQIKASIKSDMRDALREDTQFWLVTP 113
Score = 43.0 bits (98), Expect = 0.099, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
LS +R+ GI VG++ L L ++
Sbjct: 641 DASKLSAGMPIRYLGINVGQVESLSLSKDNNQVV 674
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 29/115 (25%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
LS + V F G+ VG + G L + I + ++ +
Sbjct: 755 AGSLSLGTPVLFRGVEVGTVTGTSL-GTMADRVQIALRISKKYQHLVRNNSVFWQASGYN 813
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + + + P ++ + K +
Sbjct: 814 LDFGLVGGVVKTGTFQQFIRGGIQFATPPTVPLAPQANPDKHFLLQDEAPKEWRN 868
>gi|145224743|ref|YP_001135421.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315445073|ref|YP_004077952.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|145217229|gb|ABP46633.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315263376|gb|ADU00118.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 386
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/279 (10%), Positives = 78/279 (27%), Gaps = 6/279 (2%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ DG A + +V L +S V + + +G + + + H+ ++
Sbjct: 36 GTVGRGDGATAYTVAL--ANVGTLEPNSPVMIDDVVIGSVSRIGIV---DRHAEVGIRVK 90
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
+ + AT+ L G ++EL+ E + PS
Sbjct: 91 AGVEIPANAIATVGQTSLLGSMHLELAAPLGEPAVGVLAPGSSIGLDASSTHPSTEQTLA 150
Query: 149 SNAENTS-KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + + + + + + + + + D ++ T
Sbjct: 151 ALSTVVNGGGLGQIGDVVHSFNDVFAGHQNDIRELLGRLDRFVGILDTQTDDIIATITEL 210
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
S + + +++ + E + + + D+
Sbjct: 211 DRFSATLAQQRDVVSRALREIPPALDTLVRQRPRFTEALDALRRFSDTAGTVIDAVHTDL 270
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + L D S+ + T +NI D
Sbjct: 271 VTNLANLEPALRAVADLGPDISTGLGYALTFPLNQNIID 309
>gi|240170713|ref|ZP_04749372.1| virulence factor Mce family protein [Mycobacterium kansasii ATCC
12478]
Length = 483
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 43/123 (34%), Gaps = 8/123 (6%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLD 74
+L + L+ + + + + + GL V+ G+ VGR+ +
Sbjct: 17 VLVIAVIGTIVLTATLFSGSFKSSIAVTVLSDRAGLVMDRGGKVKLRGVQVGRVSEITAG 76
Query: 75 QEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATER 131
++ H K I+P+ + + A IR L Y++ + + + R
Sbjct: 77 KD---HVTLKLAIQPEQIRYIPANVGARIRATTLFSAKYVDLVYPRHPSPQRLAAGTVLR 133
Query: 132 NQR 134
+
Sbjct: 134 AEN 136
>gi|229494259|ref|ZP_04388022.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318621|gb|EEN84479.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 415
Score = 53.4 bits (125), Expect = 8e-05, Method: Composition-based stats.
Identities = 38/302 (12%), Positives = 93/302 (30%), Gaps = 16/302 (5%)
Query: 14 VVSILFFSFFSIY----W-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
V++L + W + + EV I +P +V LS +S VR +
Sbjct: 8 TVAVLATAVALGASGCEWNGLNSVPMPGTQGRGEGAYEVQIEMP-NVTTLSQNSPVRVDD 66
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + + H+L + P+ L + TA I L G +IEL+ E+
Sbjct: 67 VAVGSVSNIEVQG---WHALVTVSLNPEVQLPANATAKIGQTSLLGSQHIELAPPVGEEP 123
Query: 123 TIFQIATERNQRAMITATP-SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
A + A P + + ++ +++ + +
Sbjct: 124 EGRLEAGDLIPIERAGAYPTTEQTLSSLSVVLNGGGLAQVQDITKELNAALGGREDSVRD 183
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+ + ++ + ++ + S + + + + + +
Sbjct: 184 LLPQLDQLVGSLDKQRGDIVSAMEGLDRLSSTVQAQHDTLNKALEGIPPALEVLVAQRQD 243
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
I + +S + + D + + + + + + T F
Sbjct: 244 ITNALTSLGGLSKVASRVIQESGDDFATNVRALSPTLKALADSGNALTQVLGVLLTFPFP 303
Query: 302 EN 303
+N
Sbjct: 304 QN 305
>gi|308371714|ref|ZP_07667230.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu004]
gi|308395901|ref|ZP_07492200.2| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu012]
gi|308335687|gb|EFP24538.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu004]
gi|308367201|gb|EFP56052.1| MCE-family protein mce2C [Mycobacterium tuberculosis SUMu012]
Length = 485
Score = 53.0 bits (124), Expect = 8e-05, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 72/249 (28%), Gaps = 5/249 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ + G++T V G+ VG + L + L + P + +
Sbjct: 43 TPTYYAQFADT-GGINTGDKVEIAGVNVGLVRSLAIRGN---RVLIGFSL-PGKTIGMQS 97
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A IRT + G +E+ E + ++ +
Sbjct: 98 RAAIRTDTILGRKNLEIEPRGSEPLKPNGFLPLAQTTTPYQIYDAFVDVTKAATGWDIDA 157
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ S + + + L+ + ++ S + I++++ ++
Sbjct: 158 VKRSLNVLSETFDQTAPHLSAALEGVKAFSDTVGRRGEQIEQLLANANRIARVLGDRSEQ 217
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ Q + +L N+ +S N H + + +E+
Sbjct: 218 VNGLLVNAKTLLAAFKQRSQALRILLTNVSEASAQVSGLITDNPNLNHVLAQLRTVSEEL 277
Query: 278 GQKIDHLLS 286
++ + L
Sbjct: 278 VKRKNELAD 286
>gi|215432467|ref|ZP_03430386.1| MCE-family protein mce4A [Mycobacterium tuberculosis EAS054]
Length = 388
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 29/103 (28%), Gaps = 9/103 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIV 69
+ ++ V + P GL + V++ GI VG++
Sbjct: 2 AAALLAGLMVGSAVLTYLSYTAAFTSTDTVTVSSPR--AGLVMEKGAKVKYRGIQVGKVT 59
Query: 70 GLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
+ H+ K I + + T I + G
Sbjct: 60 DISYSGN---HARLKLAIDSGEMGFIPSNATVRIAGNTIFGAK 99
>gi|45657722|ref|YP_001808.1| hypothetical protein LIC11859 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|45600962|gb|AAS70445.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|281192533|gb|ADA57455.1| Mce [Leptospira interrogans serovar Australis]
gi|281192535|gb|ADA57456.1| Mce [Leptospira interrogans serovar Autumnalis]
gi|281192537|gb|ADA57457.1| Mce [Leptospira borgpetersenii serovar Ballum]
gi|281192539|gb|ADA57458.1| Mce [Leptospira interrogans serovar Canicola]
gi|281192541|gb|ADA57459.1| Mce [Leptospira interrogans serovar Hebdomadis]
gi|281192543|gb|ADA57460.1| Mce [Leptospira borgpetersenii serovar Javanica]
gi|281192545|gb|ADA57461.1| Mce [Leptospira interrogans serovar Lai]
gi|281192547|gb|ADA57462.1| Mce [Leptospira interrogans serovar Linhai]
gi|281192553|gb|ADA57465.1| Mce [Leptospira interrogans serovar Paidjan]
gi|281192555|gb|ADA57466.1| Mce [Leptospira interrogans serovar Pomona]
gi|281192557|gb|ADA57467.1| Mce [Leptospira interrogans serovar Pyrogenes]
gi|281192559|gb|ADA57468.1| Mce [Leptospira borgpetersenii serovar Tarassovi]
Length = 251
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/125 (13%), Positives = 37/125 (29%), Gaps = 15/125 (12%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
Y VG+ + + ++ + + + +G+ + V G+P
Sbjct: 7 RYLLVGIIFTAAIT-VVGYFTIITEGGPIKKKGEFMKVTF-RNAEGIKVGNKVTVQGVPF 64
Query: 66 GRIVGLFL---DQEYP----------NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
G + + L D+ L+R LY + I+ + L I
Sbjct: 65 GYVSAIRLIQIDENGTEVQSGEMGIGTRVEITMLLREKISLYDNYDIIIKNESLLTGRVI 124
Query: 113 ELSTL 117
+
Sbjct: 125 AIDPG 129
>gi|145225112|ref|YP_001135790.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145217598|gb|ABP47002.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 399
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 32/280 (11%), Positives = 88/280 (31%), Gaps = 5/280 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + +++ +V L ++S V + + VG + + + H+ +
Sbjct: 36 LPGTVGTGSDAVTYRVQL-ANVGSLESNSPVMLDDVVVGAVGKMTFE---DWHAAVDISV 91
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS-GINY 146
RPD + + AT+ L G ++ L E T + PS
Sbjct: 92 RPDVVVPANAVATVGQTSLLGSMHVALDPPVGETPTGRLAPGANLPLNRTSTYPSTEQTL 151
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ ++ I ++ + + ++ V+ D + T
Sbjct: 152 SSLSVVVNGGGLTQIGDIISNFSAALDGRQGQIRSLLTRMNDVVGILDDQRDNINATISA 211
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S++ + A+ Q+ +I+ ++ + ++ + + D
Sbjct: 212 LYRLSETFAGQREVLSAALKRIPEALAVLNQQRPRIVTAMRKLGDFSDTATQLIDESQED 271
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + + + + D ++ + T + + D
Sbjct: 272 IVGNLRNLEPAVRALADVGPDLATALSYLPTYPYTQEFID 311
>gi|296140069|ref|YP_003647312.1| hypothetical protein Tpau_2367 [Tsukamurella paurometabola DSM
20162]
gi|296028203|gb|ADG78973.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 381
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/109 (12%), Positives = 34/109 (31%), Gaps = 8/109 (7%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ V V++++ + ++ + + V +R P G+ + VR
Sbjct: 17 RTRGIAFVV---VIAVIALAVWAYNEFRPRDLFS-----VTLRTPTVAAGIVDGAKVRIQ 68
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ VG + + L + L G++
Sbjct: 69 GVEVGNVSAISGLGNGQQGVTLTLDGPEGRSLTNNVEVAFSAGNLFGVS 117
>gi|297191128|ref|ZP_06908526.1| virulence factor Mce family protein [Streptomyces pristinaespiralis
ATCC 25486]
gi|197721748|gb|EDY65656.1| virulence factor Mce family protein [Streptomyces pristinaespiralis
ATCC 25486]
Length = 422
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 35/103 (33%), Gaps = 7/103 (6%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL ++++ + + + + + L + V+ G+ VG +
Sbjct: 18 GLVFLAVIALLLSLSV--ATYQHLFTSVVRITLEADTLGNQLDPRADVKLRGLLVGEVRD 75
Query: 71 LFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
+ D E + ++P+ + A + + L G +
Sbjct: 76 VRADGE---KATLDIALKPEHVSRIPADVHARLLPKTLFGEKF 115
>gi|167967133|ref|ZP_02549410.1| MCE-family protein mce4A [Mycobacterium tuberculosis H37Ra]
gi|215405540|ref|ZP_03417721.1| MCE-family protein mce4A [Mycobacterium tuberculosis 02_1987]
gi|215413412|ref|ZP_03422096.1| MCE-family protein mce4A [Mycobacterium tuberculosis 94_M4241A]
gi|215429005|ref|ZP_03426924.1| MCE-family protein mce4A [Mycobacterium tuberculosis T92]
gi|215447832|ref|ZP_03434584.1| MCE-family protein mce4A [Mycobacterium tuberculosis T85]
gi|218755276|ref|ZP_03534072.1| MCE-family protein mce4A [Mycobacterium tuberculosis GM 1503]
gi|219559566|ref|ZP_03538642.1| MCE-family protein mce4A [Mycobacterium tuberculosis T17]
gi|260188551|ref|ZP_05766025.1| MCE-family protein mce4A [Mycobacterium tuberculosis CPHL_A]
gi|260202678|ref|ZP_05770169.1| MCE-family protein mce4A [Mycobacterium tuberculosis T46]
gi|294995731|ref|ZP_06801422.1| MCE-family protein mce4A [Mycobacterium tuberculosis 210]
gi|297733155|ref|ZP_06962273.1| MCE-family protein mce4A [Mycobacterium tuberculosis KZN R506]
gi|308406180|ref|ZP_07495396.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu012]
gi|313660486|ref|ZP_07817366.1| MCE-family protein mce4A [Mycobacterium tuberculosis KZN V2475]
gi|308364267|gb|EFP53118.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu012]
gi|323717841|gb|EGB27032.1| MCE-family protein mce4A [Mycobacterium tuberculosis CDC1551A]
Length = 388
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 28/103 (27%), Gaps = 9/103 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIV 69
+ ++ V + P GL + V++ GI VG++
Sbjct: 2 AAALLAGLMVGSAVLTYLSYTAAFTSTDTVTVSSPR--AGLVMEKGAKVKYRGIQVGKVT 59
Query: 70 GLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
+ + K I + + T I + G
Sbjct: 60 DISYSGN---QARLKLAIDSGEMGFIPSNATVRIAGNTIFGAK 99
>gi|323498698|ref|ZP_08103688.1| ABC-type transport system, periplasmic component [Vibrio
sinaloensis DSM 21326]
gi|323316254|gb|EGA69275.1| ABC-type transport system, periplasmic component [Vibrio
sinaloensis DSM 21326]
Length = 160
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 47/129 (36%), Gaps = 2/129 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + + ++ L S V+ G
Sbjct: 4 TRKTELWVGGFVLAGICAILVMIFQVADVKGFGSNDTYTLNAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ + LD+E I +++ I T GL G YI L+
Sbjct: 64 VVVGRVTDIGLDKESLLPV-VSMAINAQYDQFSETSSVKILTSGLIGEQYIGLTPGFVFD 122
Query: 122 KTIFQIATE 130
+ +
Sbjct: 123 DEQMLVDGD 131
>gi|308369999|ref|ZP_07666842.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu002]
gi|308325670|gb|EFP14521.1| putative virulence factor Mce family protein [Mycobacterium
tuberculosis SUMu002]
Length = 429
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 72/249 (28%), Gaps = 5/249 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ + G++T V G+ VG + L + L + P + +
Sbjct: 43 TPTYYAQFADT-GGINTGDKVEIAGVNVGLVRSLAIRGN---RVLIGFSL-PGKTIGMQS 97
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A IRT + G +E+ E + ++ +
Sbjct: 98 RAAIRTDTILGRKNLEIEPRGSEPLKPNGFLPLAQTTTPYQIYDAFVDVTKAATGWDIDA 157
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ S + + + L+ + ++ S + I++++ ++
Sbjct: 158 VKRSLNVLSETFDQTAPHLSAALEGVKAFSDTVGRRGEQIEQLLANANRIARVLGDRSEQ 217
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ Q + +L N+ +S N H + + +E+
Sbjct: 218 VNGLLVNAKTLLAAFKQRSQALRILLTNVSEASAQVSGLITDNPNLNHVLAQLRTVSEEL 277
Query: 278 GQKIDHLLS 286
++ + L
Sbjct: 278 VKRKNELAD 286
>gi|260779433|ref|ZP_05888324.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
coralliilyticus ATCC BAA-450]
gi|260604523|gb|EEX30823.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
coralliilyticus ATCC BAA-450]
Length = 163
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKIELWVGSFVLAGICAILVMIFQVADVKGIGSNDTYSLKAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ VGR+ + LD E I +++ I T GL G YI L+
Sbjct: 64 VVVGRVTDIGLDTENLLPV-VTMAIGSQYDQFPETSSVKILTSGLIGEQYIGLTPGF 119
>gi|134094913|ref|YP_001099988.1| hypothetical protein HEAR1706 [Herminiimonas arsenicoxydans]
gi|133738816|emb|CAL61863.1| Conserved hypothetical protein; putative ABC transporter
[Herminiimonas arsenicoxydans]
Length = 323
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 41/107 (38%), Gaps = 2/107 (1%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
S+ +L + E+++ S +G+ + F+G PVGR+ + L +E +
Sbjct: 39 GSVAYLMYARGAFEVTQELVLLADDS-EGVVVGMDLTFSGFPVGRVSRIELSKEGKARMI 97
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ L S+ + +G+ G T I T + A
Sbjct: 98 VDVAQKDAHWLRTSSVFAME-RGIVGSTRIRAYTGVPADPPLPPGAE 143
>gi|324999478|ref|ZP_08120590.1| Mce family protein [Pseudonocardia sp. P1]
Length = 469
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 34/114 (29%), Gaps = 6/114 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSV 58
M+S ++ + ++ + L + I + GL + V
Sbjct: 1 MDSFASRFKYRIYALILVSIIVAF-FALCGAAYAKAFTPYEEISLRADRTGLQMYPGNRV 59
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGIT 110
+ G+ VG + + + + N + PDT + + G
Sbjct: 60 QMRGVDVGEVGDVNIV-DGGNAVDISLRMNPDTLSMVPADARVQLSQLTAFGAK 112
>gi|254773148|ref|ZP_05214664.1| mce related protein [Mycobacterium avium subsp. avium ATCC 25291]
Length = 517
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/274 (10%), Positives = 80/274 (29%), Gaps = 10/274 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG-LF 72
V ++ L + + + V+ + DGL S V+++G+ VG + +
Sbjct: 23 TVLLIAGLITGGLLLKSTGRLN-DYVRVVAELTNVGDGLPARSDVKYHGLLVGAVDNVIP 81
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
PN+ + + TA + + ++ ++L +
Sbjct: 82 AAYGKPNYVHINLKPEYAQDIPSAVTARVVPSNVFAVSSVQLVDGAP------GPSIRNG 135
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
R S + + + ++ + + + T + T A
Sbjct: 136 ARIPEDLQLSTVIFQTTISKLRDILAATGRGREDHSVGILAAVAAATNNRRGPLLTAGAQ 195
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL--QKVNQILENIQVSS 250
+D++ P S + L ++ ++ + + + ++E +
Sbjct: 196 LTRVLDELNAIVATDPGPSTVSALLDATRGLQSTAPDLVDVLHDAVRPMQTLVEKREQFR 255
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ S T E+ Q + +
Sbjct: 256 SLVTGSYHTFSVNRQAFDNHTDQLIEMTQNLTPV 289
>gi|118467504|ref|YP_887175.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118168791|gb|ABK69687.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 395
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/281 (8%), Positives = 76/281 (27%), Gaps = 3/281 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +G+ ++ L R + V+ + G V ++ D+ V+
Sbjct: 1 MRTDVRRPLLGVATAVVILAVVALSVSLFRGSFIKSVPITVLTQRAGLV--MNPDAKVKL 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT-YIELSTLRK 119
+G VGR+ + + + + I + G +
Sbjct: 59 HGAQVGRVQAIESLPDGRAALHLAMEPAYLDLIPANVGVDIAAPTVFGAKSIELVPPPNP 118
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + + ++ K++ + + ++ +
Sbjct: 119 DPQPLRAGQVLSADHVTVEINTIFEKLSTVLSKIEPHKLNQTLGALSVAVDGRGDQIGQM 178
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + T + ++ +D + + T + + V
Sbjct: 179 LTEFDAFLTKIDPSLPTLDHELAVAPHVLDAYADVAPELLTTVDAATTVSRTIVEERHNV 238
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ +L ++ S+ + + D ++ +
Sbjct: 239 DGLLLSMIGLSDIGIDVVGANRQAITDAAHLLAPTTDLTNE 279
>gi|78063238|ref|YP_373146.1| hypothetical protein Bcep18194_B2391 [Burkholderia sp. 383]
gi|77971123|gb|ABB12502.1| Mammalian cell entry related-protein [Burkholderia sp. 383]
Length = 545
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 41/403 (10%), Positives = 99/403 (24%), Gaps = 38/403 (9%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
G + GSV + S V VG++ G LD + + P
Sbjct: 149 GGRHYTLRATSLGSV---AIGSPVYHRRARVGQVTGYALDADGHG---VSIDVFVAAPF- 201
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
T + + IA + + P
Sbjct: 202 -DRTVDVDARWWQASGLGLRLGAGGMTLDTPSIAALLSGALAFASPPG------------ 248
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ S + + + + V+ + + V +
Sbjct: 249 --RASSVAAPDGARFRVADDEIDAMRTPNAPAAPVVMRFDRSLRGLEVGAPVEFRGIELG 306
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
N T+ + + + + L S + V +
Sbjct: 307 NVTAVGTEYDAARGDVTMRVTMALYPDRLGQRYRDVLGNGASEAGKVLLRTLVARGLRGQ 366
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
VG I + ++ N + + +
Sbjct: 367 LRVGNPIANRSYVALDMFPHAPPASVDTNREPIALPTVPGTLDVLRVQMTDIAGTLSRLP 426
Query: 335 IENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
++ I +++N + L +++ L A+ A+ T R + + G
Sbjct: 427 LDRIGTDMNAALVSTDALFKQLD--------TELAPHARIALGTARQSFMAAQTMLVQQG 478
Query: 395 NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ N ++ + + T + ++ E++P+ ++
Sbjct: 479 ADTSN--------VRRTLTQFARTSSALRALADDMEQHPEWLL 513
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 25/63 (39%), Gaps = 3/63 (4%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALI 87
+ P A V++R S+ GL + V F GI +G + + + + +
Sbjct: 271 MRTPNAPAAPVVMRFDRSLRGLEVGAPVEFRGIELGNVTAVGTEYDAARGDVTMRVTMAL 330
Query: 88 RPD 90
PD
Sbjct: 331 YPD 333
Score = 44.2 bits (101), Expect = 0.051, Method: Composition-based stats.
Identities = 15/91 (16%), Positives = 28/91 (30%), Gaps = 5/91 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + L + I W + I S DGL+ S++R + +GR+ +
Sbjct: 14 FWIVPLVAAALCIAW--GITSLGSRGPTITIVF-ASADGLAAGRSTLRLRNVDIGRVTRV 70
Query: 72 FLDQEYPNH-SLAKALIRPDTPLYPSTTATI 101
+ P + + I
Sbjct: 71 RALRGQPGVTIDVRLNADAQALAVADSRFWI 101
>gi|41406206|ref|NP_959042.1| hypothetical protein MAP0108 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41394554|gb|AAS02425.1| hypothetical protein MAP_0108 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 507
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/274 (10%), Positives = 80/274 (29%), Gaps = 10/274 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG-LF 72
V ++ L + + + V+ + DGL S V+++G+ VG + +
Sbjct: 7 TVLLIAGLITGGLLLKSTGRLN-DYVRVVAELTNVGDGLPARSDVKYHGLLVGAVDNVIP 65
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
PN+ + + TA + + ++ ++L +
Sbjct: 66 AAYGKPNYVHINLKPEYAQDIPSAVTARVVPSNVFAVSSVQLVDGAP------GPSIRNG 119
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
R S + + + ++ + + + T + T A
Sbjct: 120 ARIPEDLQLSTVIFQTTISKLRDILAATGRGREDHTVGILAAVAAATNNRRGPLLTAGAQ 179
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL--QKVNQILENIQVSS 250
+D++ P S + L ++ ++ + + + ++E +
Sbjct: 180 LTRVLDELNAIVATDPGPSTVSALLDATRGLQSTAPDLVDVLHDAVRPMQTLVEKREQFR 239
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ S T E+ Q + +
Sbjct: 240 SLVTGSYHTFSVNRQAFDNHTDQLIEMTQNLTPV 273
>gi|226304453|ref|YP_002764411.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183568|dbj|BAH31672.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 415
Score = 53.0 bits (124), Expect = 9e-05, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 49/134 (36%), Gaps = 17/134 (12%)
Query: 14 VVSILFFSFFSIY----W-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
V++L + W + + EV I +P +V LS +S VR +
Sbjct: 8 TVAVLATAVALGASGCEWNGLNSVPMPGTQGRGEGAYEVQIEMP-NVTTLSQNSPVRVDD 66
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKE 120
+ VG + + + H+L + P+ L + TA I L G +IE +
Sbjct: 67 VAVGSVSNIEVQG---WHALVTVSLNPEVQLPANATAKIGQTSLLGSQHIELAPPVGEEP 123
Query: 121 KKTIFQIATERNQR 134
+ + +R
Sbjct: 124 EGRLEAGDLIPIER 137
>gi|126433449|ref|YP_001069140.1| hypothetical protein Mjls_0840 [Mycobacterium sp. JLS]
gi|126233249|gb|ABN96649.1| Mammalian cell entry related domain protein [Mycobacterium sp. JLS]
Length = 317
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 43/128 (33%), Gaps = 4/128 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
L +++ F+ I L + + + + ++G+ DS++ G+PVG++ +
Sbjct: 10 LAFAAMIVFAVGYIGSLGVRLKPPDNRVNLSMTV-ADINGIVVDSNILLRGVPVGKVSHI 68
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ + + + + G +YI L R++ +
Sbjct: 69 ---ATSVSGATIDFYVDDRFRIPADCDVRLDNLSALGESYIGLFPRRQDGPMLRDGQHIS 125
Query: 132 NQRAMITA 139
+
Sbjct: 126 TEMVEQPP 133
>gi|294508853|ref|YP_003572912.1| probable methyl-accepting chemotaxis protein [Salinibacter ruber
M8]
gi|294345182|emb|CBH25960.1| probable methyl-accepting chemotaxis protein [Salinibacter ruber
M8]
Length = 614
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/304 (11%), Positives = 91/304 (29%), Gaps = 9/304 (2%)
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ + +++ + ++ I E + A E ++ + I + + Q
Sbjct: 288 SVRDAAEETARTTEEISASSEQMATAAEQQSAQAEEVAAPVEQMNQTISENARSVQRAAE 347
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
++ + I + + + I+ ++ + V +
Sbjct: 348 ATRDATQQAERSGEIVAEATQQIRQIAEGAQATADTIESVGDSSEEIIQIVDTIDEIAGQ 407
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
T + + + + E + ++ + + +I
Sbjct: 408 TNLLALNAAIEAARAGDEAAGQTGQGFAVVAEEVRELAEEADAATTEIEQMVQGATGEIE 467
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKINR 388
++T + + E S +++++A + + A TS +I R
Sbjct: 468 DAVSTARQSSQRAQKGLELAGEADSALDDVAAAIDRAQQKADEIAAASEEQSTTSNEIAR 527
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ SI S +G+ + + L+ TV + + FE GR +
Sbjct: 528 SVQSISTA-ARESAAGVTQVSDSADDLEATVQRLRESVEKFE-------LGRAARTSPST 579
Query: 449 KPKH 452
+P H
Sbjct: 580 RPAH 583
>gi|84500779|ref|ZP_00999028.1| paraquat-inducible protein, putative [Oceanicola batsensis
HTCC2597]
gi|84391732|gb|EAQ04064.1| paraquat-inducible protein, putative [Oceanicola batsensis
HTCC2597]
Length = 559
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF--LDQEYPNHSLAKA 85
GP ++ +V GL+ D+ V G+ +GR+ L +D + +
Sbjct: 291 GPSLDLTAIFDDNVSGLAVDAPVDLGGVRIGRVTALNGIVDPDRFGDDRVRL 342
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 30/386 (7%), Positives = 98/386 (25%), Gaps = 10/386 (2%)
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAG 108
GL+ ++ + + GI VGRI + ++ + A + ST +
Sbjct: 174 AGLTENAPIVYQGIEVGRIGSASITEDGRTVEAEAVVFAPHARLITTSTRFWDASGFRFS 233
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+ ++ + ++ + + + S S
Sbjct: 234 LGAGGARLDFSSVASLVSGGVTFRTVVSGGEPAQDGDSYLVYGDEGAARSSVFSEEEGPS 293
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
++ L ++ D + + +
Sbjct: 294 LDLTAIFDDNVSGLAVDAPVDLGGVRIGRVTALNGIVDPDRFGDDRVRLAATLSVNPARL 353
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + L S +++ + T+ ++
Sbjct: 354 GLEGEAGPDEALDFLSRRVEEGLRARLVSASLLSAGLKIEFITEDDPSNPDARIDATAEP 413
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI------NTIENITSNL 342
+ + + ++ + R + I E+ ++ + + + S+L
Sbjct: 414 NPTVPTTDSDIADVSATAEGVFERINNLPIEELLQSAIGLMDNVSRVAGSPDLRELPSDL 473
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY--IPSIGNNLQNF 400
+ + + + +I A +E L +N I + +
Sbjct: 474 RGAVGDVRDTVGDVRSILASEELQELPTRFTSLADEIETLVVSLNEQDAAGRILAAV-DA 532
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCL 426
++ + + V + + ++ +
Sbjct: 533 TEEAAESVSSSVAGIPDLIDRLNAVA 558
Score = 43.4 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 27/87 (31%), Gaps = 2/87 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + L + Q ++ + G+ + +R+ + VG + +
Sbjct: 23 IVWLIPLAALVIALGVAWQSYADRGPLVEITFENASGVVAGQTQLRYRDVSVGLVESIGF 82
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ +H + + Y A
Sbjct: 83 T-DNLDHVVVGVRLDRSVEEYVDDDAQ 108
>gi|295691536|ref|YP_003595229.1| mammalian cell entry related domain-containing protein [Caulobacter
segnis ATCC 21756]
gi|295433439|gb|ADG12611.1| Mammalian cell entry related domain protein [Caulobacter segnis
ATCC 21756]
Length = 170
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T++G+ V+++ + + G E+ + G L+ ++V G+ VG
Sbjct: 9 ETAMGVVVLALAGGFLTYSLSVGGVSTKRGN-YEISAKF-GEAGSLAAGAAVSVAGVKVG 66
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L+ + ++AK I P L +TA I + GL G +I ++ +
Sbjct: 67 TVSQVTLEPKTY-LAVAKLSIDPTVKLPADSTAKITSDGLLGGAHIAIAPGASLEDLKPG 125
Query: 127 IATERNQ 133
E Q
Sbjct: 126 GEIENTQ 132
>gi|182434831|ref|YP_001822550.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178463347|dbj|BAG17867.1| putative Mce family protein [Streptomyces griseus subsp. griseus
NBRC 13350]
Length = 426
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 12/141 (8%)
Query: 1 MESKNYYT----SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M + + T G+ + + + S + A V +R + + ++
Sbjct: 1 MRTSSTRTVRRRLAGVTFLVVPAVLVWVSV--SVYEKDFTDDATVTVRTGAVGNEMHDNA 58
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE- 113
V+ G+ +G++ + D + + I D + TA + L G ++
Sbjct: 59 DVKLRGVVIGQVRSIATDGDG---ARLTLAIDRDKLDQVPADVTAQMLPTTLFGARFVAL 115
Query: 114 LSTLRKEKKTIFQIATERNQR 134
+ T+ A R
Sbjct: 116 VPPRIPTGTTLRAGAVIPQDR 136
>gi|326333292|ref|ZP_08199539.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948936|gb|EGD41029.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 329
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/300 (13%), Positives = 85/300 (28%), Gaps = 15/300 (5%)
Query: 1 MESKN---YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M + GL + + ++ + GL +
Sbjct: 1 MSVRTPSQNAAR-GLIGTMAIALVVTASLNYNKLPLVGNGDI-IHAAFTE-AGGLKGGDA 57
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V +G VG++ + LD + L D L T A I T L G +EL
Sbjct: 58 VMVSGAQVGKVRDVRLDGDEVVADLVVTE--GDVDLGGKTEARIITVTLLGRAAVELVPS 115
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ T S N + E T+ + ++ L+
Sbjct: 116 GS-------GRLSAGDTIPTSRTSSPYNLTATLNELTTTTADIDKAQLAGALDQASAALS 168
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T ++ + + +++ + + + + + LQ
Sbjct: 169 GTHDDVGPALRGVTELTAAVEQNDDQLRALLARASRVSGVLASRNEQIETLLVSGQSLLQ 228
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
++N + ++ S Q+ V D R T + + LL+ + ++ T
Sbjct: 229 QLNARQAVVVSLLSSVQDLSTQLRGLVDDNRATLGPALDQLDAVVTLLNRNKAALQDAIT 288
>gi|50121389|ref|YP_050556.1| hypothetical protein ECA2463 [Pectobacterium atrosepticum SCRI1043]
gi|49611915|emb|CAG75364.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 880
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + IY A V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLIY-----TNQQERGATVTIDFV-SADGIVAGRTPVRYQGVEVGTVQNIKL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ +A I+ D L T + T
Sbjct: 82 S-DDLRTIEVEASIKSDMKEALRSGTQFWLVTP 113
Score = 44.9 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 24/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F GI VG + GL L + I + ++ +
Sbjct: 756 AGALQVGTPVLFRGIEVGTVTGLSL-GNLSDRIAVSLRISKRYQHLVRDNSVFWQASGYN 814
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + P N K
Sbjct: 815 LEFGLVGGVIKSGTFQQFIRGGIAFATPPSTPLAPKAQEGKHFLLRNEEPKEWRQ 869
Score = 41.8 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ + V +G+ VG++V LD++ + L R L+ + + ++
Sbjct: 405 GIDSGQPVLLHGVQVGQVVKRTLDEQGVSFILV-IEPRYRQLLHRDSKFIVNSR 457
>gi|326775349|ref|ZP_08234614.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
gi|326655682|gb|EGE40528.1| virulence factor Mce family protein [Streptomyces cf. griseus
XylebKG-1]
Length = 426
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/141 (14%), Positives = 46/141 (32%), Gaps = 12/141 (8%)
Query: 1 MESKNYYT----SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M + + T G+ + + + S + A V +R + + ++
Sbjct: 1 MRTSSTRTVRRRLAGVTFLVVPAVLVWVSV--SVYEKDFTDDATVTVRTGAVGNEMHDNA 58
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE- 113
V+ G+ +G++ + D + + I D + TA + L G ++
Sbjct: 59 DVKLRGVVIGQVRSIATDGDG---ARLTLAIDRDKLDQVPADVTAQMLPTTLFGARFVAL 115
Query: 114 LSTLRKEKKTIFQIATERNQR 134
+ T+ A R
Sbjct: 116 VPPRIPTGTTLRAGAVIPQDR 136
>gi|118472932|ref|YP_885537.1| mce related protein [Mycobacterium smegmatis str. MC2 155]
gi|118174219|gb|ABK75115.1| mce related protein [Mycobacterium smegmatis str. MC2 155]
Length = 534
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 3/98 (3%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL V+ + ++ + + + D P V+ + DGL S V+++G+ VG +
Sbjct: 21 GLAVLVV-AGLISTVLLVKATGRLD-PYVRVVAALINVGDGLPQRSDVKYHGVLVGMVED 78
Query: 71 LFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ PN+ + + + TA + +
Sbjct: 79 VTPAAHGEPNYVHINLNPEYASSIPSTVTARVVPSNVF 116
>gi|186895761|ref|YP_001872873.1| hypothetical protein YPTS_2455 [Yersinia pseudotuberculosis PB1/+]
gi|186698787|gb|ACC89416.1| Mammalian cell entry related domain protein [Yersinia
pseudotuberculosis PB1/+]
Length = 883
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 17 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 69 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 31/372 (8%), Positives = 91/372 (24%), Gaps = 13/372 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 227
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 228 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 284
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 285 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 344
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 345 SPRISLSNANVSELLTGNTLELIPGDGEPQQHFTVLPSSKSLLQQPNALELQLTAPQSYG 404
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 405 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 464
Query: 346 SQKFAELMSK--INN--ISALKENNSLFKDAQRAMHT---FRDTSEKINRYIPSIGNNLQ 398
++ I+ + + A+ + ++ + + S
Sbjct: 465 GVNVQGASAQEWIDGGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTL 524
Query: 399 NFSQSGLNDIQN 410
+ S L DIQ
Sbjct: 525 TLTASSLPDIQA 536
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 762 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 820
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 821 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 875
Score = 39.9 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 648 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 680
>gi|162421896|ref|YP_001607071.1| hypothetical protein YpAngola_A2667 [Yersinia pestis Angola]
gi|162354711|gb|ABX88659.1| mce family protein [Yersinia pestis Angola]
Length = 883
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 17 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 69 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 31/372 (8%), Positives = 91/372 (24%), Gaps = 13/372 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 227
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 228 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 284
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 285 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 344
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 345 SPRISLSNANVSELLTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYG 404
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 405 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 464
Query: 346 SQKFAELMSK--INN--ISALKENNSLFKDAQRAMHT---FRDTSEKINRYIPSIGNNLQ 398
++ I+ + + A+ + ++ + + S
Sbjct: 465 GVNVQGASAQEWIDGGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTL 524
Query: 399 NFSQSGLNDIQN 410
+ S L DIQ
Sbjct: 525 TLTASSLPDIQA 536
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 762 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 820
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 821 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 875
Score = 39.9 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 648 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 680
>gi|170024018|ref|YP_001720523.1| hypothetical protein YPK_1779 [Yersinia pseudotuberculosis YPIII]
gi|169750552|gb|ACA68070.1| Mammalian cell entry related domain protein [Yersinia
pseudotuberculosis YPIII]
Length = 876
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 17 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 69 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 43.4 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 755 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 813
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 814 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 868
Score = 43.0 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 30/365 (8%), Positives = 90/365 (24%), Gaps = 6/365 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 227
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 228 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 284
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 285 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 344
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 345 SPRISLSNANVSELLTGNTLELIPGDGEPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYG 404
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 405 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 464
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++ + + +A + + ++ + + S + S L
Sbjct: 465 GVNVQGASAQEWIDGGILLLSGSKGEALKQYPLYSSVAKATDGILGSSPATTLTLTASSL 524
Query: 406 NDIQN 410
DIQ
Sbjct: 525 PDIQA 529
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 641 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 673
>gi|108812091|ref|YP_647858.1| hypothetical protein YPN_1929 [Yersinia pestis Nepal516]
gi|145599029|ref|YP_001163105.1| hypothetical protein YPDSF_1747 [Yersinia pestis Pestoides F]
gi|149366344|ref|ZP_01888378.1| hypothetical protein YPE_1561 [Yersinia pestis CA88-4125]
gi|165925634|ref|ZP_02221466.1| mce family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166008612|ref|ZP_02229510.1| mce family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166210857|ref|ZP_02236892.1| mce family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167426776|ref|ZP_02318529.1| mce family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167469703|ref|ZP_02334407.1| Paraquat-inducible protein B [Yersinia pestis FV-1]
gi|229843814|ref|ZP_04463957.1| conserved protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229894664|ref|ZP_04509845.1| conserved protein [Yersinia pestis Pestoides A]
gi|229897074|ref|ZP_04512230.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229902410|ref|ZP_04517529.1| conserved protein [Yersinia pestis Nepal516]
gi|270490413|ref|ZP_06207487.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294504114|ref|YP_003568176.1| hypothetical protein YPZ3_2004 [Yersinia pestis Z176003]
gi|108775739|gb|ABG18258.1| hypothetical protein YPN_1929 [Yersinia pestis Nepal516]
gi|145210725|gb|ABP40132.1| hypothetical protein YPDSF_1747 [Yersinia pestis Pestoides F]
gi|149290718|gb|EDM40793.1| hypothetical protein YPE_1561 [Yersinia pestis CA88-4125]
gi|165922743|gb|EDR39894.1| mce family protein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165992994|gb|EDR45295.1| mce family protein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166208037|gb|EDR52517.1| mce family protein [Yersinia pestis biovar Antiqua str. B42003004]
gi|167054229|gb|EDR64052.1| mce family protein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229680456|gb|EEO76553.1| conserved protein [Yersinia pestis Nepal516]
gi|229689422|gb|EEO81485.1| conserved protein [Yersinia pestis biovar Orientalis str. India
195]
gi|229693411|gb|EEO83460.1| conserved protein [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229702419|gb|EEO90437.1| conserved protein [Yersinia pestis Pestoides A]
gi|262361697|gb|ACY58418.1| hypothetical protein YPD4_1510 [Yersinia pestis D106004]
gi|262366164|gb|ACY62721.1| hypothetical protein YPD8_2042 [Yersinia pestis D182038]
gi|270338917|gb|EFA49694.1| conserved hypothetical protein [Yersinia pestis KIM D27]
gi|294354573|gb|ADE64914.1| hypothetical protein YPZ3_2004 [Yersinia pestis Z176003]
Length = 883
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 17 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 69 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 31/372 (8%), Positives = 91/372 (24%), Gaps = 13/372 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 227
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 228 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 284
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 285 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 344
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 345 SPRISLSNANVSELLTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYG 404
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 405 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 464
Query: 346 SQKFAELMSK--INN--ISALKENNSLFKDAQRAMHT---FRDTSEKINRYIPSIGNNLQ 398
++ I+ + + A+ + ++ + + S
Sbjct: 465 GVNVQGASAQEWIDGGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTL 524
Query: 399 NFSQSGLNDIQN 410
+ S L DIQ
Sbjct: 525 TLTASSLPDIQA 536
Score = 43.4 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 762 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 820
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 821 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 875
Score = 39.9 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 648 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 680
>gi|218928829|ref|YP_002346704.1| hypothetical protein YPO1701 [Yersinia pestis CO92]
gi|115347440|emb|CAL20344.1| conserved hypothetical protein [Yersinia pestis CO92]
Length = 883
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 17 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 69 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 31/372 (8%), Positives = 91/372 (24%), Gaps = 13/372 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 227
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 228 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 284
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 285 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 344
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 345 SPRISLSNANVSELLTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYG 404
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 405 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 464
Query: 346 SQKFAELMSK--INN--ISALKENNSLFKDAQRAMHT---FRDTSEKINRYIPSIGNNLQ 398
++ I+ + + A+ + ++ + + S
Sbjct: 465 GVNVQGASAQEWIDGGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTL 524
Query: 399 NFSQSGLNDIQN 410
+ S L DIQ
Sbjct: 525 TLTASSLPDIQA 536
Score = 43.4 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 762 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 820
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 821 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 875
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 648 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 680
>gi|153946854|ref|YP_001400645.1| mce family protein [Yersinia pseudotuberculosis IP 31758]
gi|152958349|gb|ABS45810.1| mce family protein [Yersinia pseudotuberculosis IP 31758]
Length = 883
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 17 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 69 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMEDSLREGTQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 31/372 (8%), Positives = 91/372 (24%), Gaps = 13/372 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 169 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 227
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 228 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 284
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 285 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 344
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 345 SPRISLSNANVSELLTGNTLELIPGDGEPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYG 404
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 405 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 464
Query: 346 SQKFAELMSK--INN--ISALKENNSLFKDAQRAMHT---FRDTSEKINRYIPSIGNNLQ 398
++ I+ + + A+ + ++ + + S
Sbjct: 465 GVNVQGASAQEWIDGGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTL 524
Query: 399 NFSQSGLNDIQN 410
+ S L DIQ
Sbjct: 525 TLTASSLPDIQA 536
Score = 43.4 bits (99), Expect = 0.077, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 762 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 820
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 821 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 875
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 648 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 680
>gi|108807815|ref|YP_651731.1| hypothetical protein YPA_1820 [Yersinia pestis Antiqua]
gi|167401775|ref|ZP_02307266.1| mce family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
gi|108779728|gb|ABG13786.1| hypothetical protein YPA_1820 [Yersinia pestis Antiqua]
gi|167048880|gb|EDR60288.1| mce family protein [Yersinia pestis biovar Antiqua str. UG05-0454]
Length = 880
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 14 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 65
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 66 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMEDSLREGTQFWLVTP 110
Score = 44.2 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 31/372 (8%), Positives = 91/372 (24%), Gaps = 13/372 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 166 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 224
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 225 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 281
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 282 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 341
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 342 SPRISLSNANVSELLTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYG 401
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 402 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 461
Query: 346 SQKFAELMSK--INN--ISALKENNSLFKDAQRAMHT---FRDTSEKINRYIPSIGNNLQ 398
++ I+ + + A+ + ++ + + S
Sbjct: 462 GVNVQGASAQEWIDGGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTL 521
Query: 399 NFSQSGLNDIQN 410
+ S L DIQ
Sbjct: 522 TLTASSLPDIQA 533
Score = 43.4 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 759 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 817
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 818 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 872
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 645 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 677
>gi|218960511|ref|YP_001740286.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167729168|emb|CAO80079.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 360
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/353 (9%), Positives = 93/353 (26%), Gaps = 16/353 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ + +L ++ R N + + G+ST + V + G
Sbjct: 8 SRKIVFAFISIPVLLLLLAMVFIAIRQNLLEKKYVYYSTL--ANAMGISTQTPVLYKGFE 65
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VGR+ L ++ L R + + T + G T +E ++ +
Sbjct: 66 VGRVRDFSLMEDGNIGLEFYILNRYKNIMVTGSILARNTNPITGKTTLEFIQNPNSREHL 125
Query: 125 FQIATERNQRAMITATP--------------SGINYFISNAENTSKKISDSSRHIQKIIE 170
+T + N ++ +D + ++
Sbjct: 126 QDKSTILSSDFPEGKKQLKLIAPQTSDPISLILANLAQLSSSLNEDYNADKGSIPRFLVN 185
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + + +I + + + N ++ + +
Sbjct: 186 LADASEKANASMNKVEEITTELSILTANLNQDNNPESGVLLRTLNNLAELSQGLNNRMNE 245
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
++ I I + S + + ET + ++ +L+ ++
Sbjct: 246 LEFILASAQTAIDNYKKPDSLLIKLLDPMQDKILQPLSETLNNLESATAELAKILATVNN 305
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
S +++A + + + + + + I N
Sbjct: 306 PELRLLLSNLNDSLAKARKTLEGLNNNPLLRKGISPSAEQNMPSPKYIHQVPN 358
>gi|22125756|ref|NP_669179.1| hypothetical protein y1863 [Yersinia pestis KIM 10]
gi|45441538|ref|NP_993077.1| hypothetical protein YP_1726 [Yersinia pestis biovar Microtus str.
91001]
gi|21958678|gb|AAM85430.1|AE013789_7 hypothetical protein y1863 [Yersinia pestis KIM 10]
gi|45436399|gb|AAS61954.1| Paraquat-inducible protein B [Yersinia pestis biovar Microtus str.
91001]
Length = 885
Score = 53.0 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 39/106 (36%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + + F L + + IY N + E+ I + G+ + +R+
Sbjct: 19 KRRFSPFWLLPF--IALLITGWLIY-----NNWQERGTEITIDFQSTA-GIVAGRTPIRY 70
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + + LD + + A I+ D L T + T
Sbjct: 71 QGVDVGLVQSIRLD-DNLRNIKVTASIKNDMEDSLREGTQFWLVTP 115
Score = 44.2 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 31/372 (8%), Positives = 91/372 (24%), Gaps = 13/372 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+ S V + IPVG++ + + + LI + + +
Sbjct: 171 DLGSLNNGSLVYYRKIPVGKVYDYTIAPDNNG-VIIDVLIDRRFANLVKKDSRFWNVSGF 229
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
A + S + + A + +
Sbjct: 230 KADFSLSGASVQMESLAALVNGAIAFDSPQNS---QDAAPDQPFQLYSDLAHSQRGVAIT 286
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + ++ T ++T S + +
Sbjct: 287 LDLPGGSHLSEGRTPLIYQGLQVGTLTKMTLQPDQKVTGELTIDPSVVNLMRSGTRIEMN 346
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S + ++ ++ + + + V+ + + + +
Sbjct: 347 SPRISLSNANVSELLTGNTLELIPGDGDPQQHFTVLPSSKSLLQQPNVLELQLTAPQSYG 406
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
D + + + +++ + +AI S + N+
Sbjct: 407 IDVGQPISLRGIKIGQVLTRELSADGVTFTAAIEAKYRHLVHKDSKFVANSRLDVNVGID 466
Query: 346 SQKFAELMSK--INN--ISALKENNSLFKDAQRAMHT---FRDTSEKINRYIPSIGNNLQ 398
++ I+ + + A+ + ++ + + S
Sbjct: 467 GVNVQGASAQEWIDGGILLLSGSKGEVSGSKGEALKQYPLYSSVAKATDGILGSSPATTL 526
Query: 399 NFSQSGLNDIQN 410
+ S L DIQ
Sbjct: 527 TLTASSLPDIQA 538
Score = 43.4 bits (99), Expect = 0.078, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 764 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 822
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + I P K
Sbjct: 823 FEFGLIGGVVKSGTFQQFIRGGIAFATPPTIPLAPRANVNQHFLLAPEEPKDWRK 877
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LS +R+ GI +G++ L L E
Sbjct: 650 DASKLSAGMPIRYLGIDIGQVESLKLAPERNEV 682
>gi|330901766|gb|EGH33185.1| PqiB family protein [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 203
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/184 (7%), Positives = 44/184 (23%), Gaps = 10/184 (5%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
F G + + + + + + +
Sbjct: 12 EQSARVLGAFVANGLRAQVRNGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSF 71
Query: 325 RQKIISTINTIENITSNL-NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTS 383
+ +E +++ + + +S++ +S+ + + T
Sbjct: 72 DKLQEQLQAFVEKLSNLPIDQLAGNLNGTLSELQKTLKQVN-SSVLPQMRGTLQQAEKTL 130
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
N + + ++Q T + R+P+ ++ GR
Sbjct: 131 GTANDSFAE--------DSPARQQLGQAMDEVQRTARSVRVLTDFLSRHPESLIRGRTGD 182
Query: 444 SVKI 447
+
Sbjct: 183 AAPR 186
>gi|326316568|ref|YP_004234240.1| mammalian cell entry related domain-containing protein [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323373404|gb|ADX45673.1| mammalian cell entry related domain protein [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 339
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 42/111 (37%), Gaps = 2/111 (1%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
S +L + P ++++ S +G+ + F+G P+GR+ L ++
Sbjct: 47 IIGSGLYLLYARGVFEPTQQLVLTAEDS-EGVVAGMDMTFSGFPIGRVRSTELAEDGDVR 105
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L + L S+ T+ +G+ G T I+ + + A
Sbjct: 106 ILIDVPRKDAHWLRESSVFTLV-RGIVGGTTIKAYSGILTDPPLPDGAVRP 155
>gi|163751214|ref|ZP_02158442.1| PqiB family protein [Shewanella benthica KT99]
gi|161328928|gb|EDQ00002.1| PqiB family protein [Shewanella benthica KT99]
Length = 872
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 33/88 (37%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ +WL EV I P S G+ + VR+ G+ VG++V + +D E
Sbjct: 20 LVAIILGFWLG-IKSIREAGIEVRIHFP-SATGIDVGKTLVRYRGLTVGKVVDIGIDDEL 77
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
K R D L T + T
Sbjct: 78 QGVNVDLKMDYRADPFLNEQTKFWLVTP 105
>gi|262203805|ref|YP_003275013.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
gi|262087152|gb|ACY23120.1| virulence factor Mce family protein [Gordonia bronchialis DSM
43247]
Length = 433
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/355 (8%), Positives = 96/355 (27%), Gaps = 17/355 (4%)
Query: 13 FVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
F + + + + G E+ IP GL ++ + +
Sbjct: 17 FASIAVAATVLLAGCSFDGPNSLPVPGAEGTGGGSYEITAVIPT-AAGLVNNAPILMDDA 75
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG I + ++ ++L + T + + + G ++++ T
Sbjct: 76 TVGSIGDIEVE---DWNALITMRLNRGTMVPEGSHVMVGMTSALGSMHLQIVQPEHPSGT 132
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ +R +T P N +A + + + + ++
Sbjct: 133 MMH----AGERIPLTKCPEQQNIAAPDAPTVPDINAAQQVALCTYPSTEQVLSSLSVVLN 188
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ + + +D++ Q + + + + L +++ +
Sbjct: 189 GGGLSQFGDIVHEMDQVFSGHQDAIRALIPRLNTLVGDLNTQKDNIIRATEGLDRLSATM 248
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + +++ + D R+ K+ +D + S
Sbjct: 249 NQQSPTIEKALSDGPRILQLLVDQRKHLTDSLAAVDKVSRTTNDILTANSDDIRSFVRGL 308
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ + + + + + + +S +++N
Sbjct: 309 RPALQQLAATGPALSQSLNILLTFPFYEPTIGKIVKGDYVNSDLVLDLTFARLNK 363
>gi|118465369|ref|YP_879398.1| mce related protein [Mycobacterium avium 104]
gi|118166656|gb|ABK67553.1| mce related protein [Mycobacterium avium 104]
Length = 518
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/274 (10%), Positives = 80/274 (29%), Gaps = 10/274 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG-LF 72
V ++ L + + + V+ + DGL S V+++G+ VG + +
Sbjct: 23 TVLLIAGLITGGLLLKSTGRLN-DYIRVVAELTNVGDGLPARSDVKYHGLLVGAVDNVIP 81
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
PN+ + + TA + + ++ ++L +
Sbjct: 82 AAYGKPNYVHINLKPEYAQDIPSAVTARVVPSNVFAVSSVQLVDGAP------GPSIRNG 135
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
R S + + + ++ + + + T + T A
Sbjct: 136 ARIPEDLQLSTVIFQTTISKLRDILAATGRGREDHSVGILAAVAAATNNRRGPLLTAGAQ 195
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL--QKVNQILENIQVSS 250
+D++ P S + L ++ ++ + + + ++E +
Sbjct: 196 LTRVLDELNAIVATDPGPSTVSALLDATRGLQSTAPDLVDVLHDAVRPMQTLVEKREQFR 255
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ S T E+ Q + +
Sbjct: 256 SLVTGSYHTFSVNRQAFDNHTDQLIEMTQNLTPV 289
>gi|197284890|ref|YP_002150762.1| hypothetical protein PMI1012 [Proteus mirabilis HI4320]
gi|227355291|ref|ZP_03839692.1| possible paraquat-inducible protein B [Proteus mirabilis ATCC
29906]
gi|194682377|emb|CAR42215.1| conserved hypothetical protein [Proteus mirabilis HI4320]
gi|227164515|gb|EEI49386.1| possible paraquat-inducible protein B [Proteus mirabilis ATCC
29906]
Length = 772
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/279 (11%), Positives = 80/279 (28%), Gaps = 10/279 (3%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ F WL + ++ I S G+ + + +R+ G+ VG + + L
Sbjct: 29 VIAIFIASWL-LFQHWQEKGVQITIDF-QSASGIVSGRTPIRYQGVDVGIVQDVTLS-ND 85
Query: 78 PNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ A IR + L +T + T + + I+
Sbjct: 86 LRRVIVTADIRKNLANALRKNTQFWLVTPK----ASLSGVSGLDALVGGNYISMLPGDGE 141
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
+ +N + + I+ ++ ++ + + + + +N
Sbjct: 142 KQFQFVAQEVRPKANIDKNQQIITLTADNLGSLNVDSQVYYRKVPVGKVYSYAIRPDNQG 201
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
++ Q + +N K +I ++ V+ ++ +
Sbjct: 202 IFIELSIDKQYAHLIRQDSHFWNVSGFQGNFNLKSGASIKMESVSALINGAIAFDSPENS 261
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
Q T+ + D L+ +S+
Sbjct: 262 PPAQENQQFVLQSATSVDAGKALYGEDGLIISLTSEESW 300
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 21/57 (36%), Gaps = 3/57 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RPDTPLYPSTTATIRT 103
+ + + + G+ VG + GL L + L I + + +T + +
Sbjct: 651 AGSVQIGTPIYYRGLEVGAVTGLEL-GNMSDRVLIHIRISQKYQYLVRNNTEFWLSS 706
Score = 37.6 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
LS +R+ GI +G++ L L + S+
Sbjct: 537 DASKLSEGMPIRYLGIDIGQVETLTLSADKKAVSV 571
>gi|315441858|ref|YP_004074737.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260161|gb|ADT96902.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 379
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 84/282 (29%), Gaps = 8/282 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFF---SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
+ + V+ L F + + L + + +P V+ L +S VR
Sbjct: 8 RAAAVIMIALTVAGLSGCGFRGLNSFRLPGTQGQGQGSYTIQAEMPD-VETLQPNSRVRV 66
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ VG + + H+L + D L ++T ++ L G +IEL+
Sbjct: 67 GDVNVGTVTKIE---RRGWHALLTLALNGDVDLPANSTVSLGQTSLLGSLHIELAPPTDV 123
Query: 121 KKTIFQIATERNQRAMITATPS-GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A A PS + + + +
Sbjct: 124 RPAGKLRAGSLIPLTSAGAYPSTEQTLASVSLLLNGGGVGQVQDITTALTSALGGREADF 183
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + + T AN I ++ TQ I D A+ +
Sbjct: 184 RSLLTQLDTFTANVNGQIGDIIAATQSLNDLVAQFAAQKPIIDKALETIPDALAVINAER 243
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+Q++E + ++D V + + + V + +
Sbjct: 244 DQLVEAVHQLGKFSALAADTVNQSQESLIQILNDMGPVLESL 285
>gi|237801281|ref|ZP_04589742.1| PqiB family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024140|gb|EGI04197.1| PqiB family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 204
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 10/105 (9%), Positives = 29/105 (27%), Gaps = 9/105 (8%)
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ + +S++ +S+ + + T N
Sbjct: 92 DQLAGNLNGTLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAE--------DS 142
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + ++Q T + R+P+ ++ GR +
Sbjct: 143 PARQQLGQALDEVQRTARSVRVLTDFLSRHPESLIRGRTGDAAPR 187
>gi|308369576|ref|ZP_07666754.1| LOW QUALITY PROTEIN: virulence factor Mce family protein
[Mycobacterium tuberculosis SUMu002]
gi|308327087|gb|EFP15938.1| LOW QUALITY PROTEIN: virulence factor Mce family protein
[Mycobacterium tuberculosis SUMu002]
Length = 370
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 35/101 (34%), Gaps = 11/101 (10%)
Query: 16 SILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
++ S W L + V ++P V+ + +S VR + VG +
Sbjct: 1 MMIAAVVASCGWRGLNSLPLPGTQGNGPGSFAVQAQLPD-VNNIQPNSRVRVADVTVGHV 59
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+ H+L + D L + TA I T L G
Sbjct: 60 TKIE---RQGWHALVTMRLDGDVDLPANATAKIGTTSLLGS 97
>gi|145221247|ref|YP_001131925.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213733|gb|ABP43137.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 379
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 84/282 (29%), Gaps = 8/282 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFF---SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
+ + V+ L F + + L + + +P V+ L +S VR
Sbjct: 8 RAAAVIMIALTVAGLSGCGFRGLNSFRLPGTQGQGQGSYTIQAEMPD-VETLQPNSRVRV 66
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ VG + + H+L + D L ++T ++ L G +IEL+
Sbjct: 67 GDVNVGTVTKIE---RRGWHALLTLALNGDVDLPANSTVSLGQTSLLGSLHIELAPPTDV 123
Query: 121 KKTIFQIATERNQRAMITATPS-GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A A PS + + + +
Sbjct: 124 RPAGKLRAGSLIPLTSAGAYPSTEQTLASVSLLLNGGGVGQVQDITTALTSALGGREADF 183
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + + T AN I ++ TQ I D A+ +
Sbjct: 184 RSLLTQLDTFTANVNGQIGDIIAATQSLNDLVAQFAAQKPIIDKALETIPDALAVINAER 243
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+Q++E + ++D V + + + V + +
Sbjct: 244 DQLVEAVDQLGKFSALAADTVNQSQESLIQILNDMGPVLESL 285
>gi|326495412|dbj|BAJ85802.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 443
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS ++ WL + G+ + +R G+ VG +V
Sbjct: 161 VGLFMVSGAVLLALALAWLRGFQLRSRFRKYNAVFEFSQACGICVGTPLRIRGVTVGSVV 220
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ A + D + ++ + GL T I+++
Sbjct: 221 RVD---SSLRSIDAYVEVEDDKIIVPRNSLVEVNQSGLLMETMIDITPKDP 268
>gi|311741978|ref|ZP_07715788.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311314471|gb|EFQ84378.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 320
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/271 (10%), Positives = 78/271 (28%), Gaps = 4/271 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
++ + I V+ + L V +G VG + + +
Sbjct: 1 MIGTVTLVVVMIVAYRFDQLPFIASDRVVSADFSEIGTLRPGDDVLVSGATVGEVRKVEI 60
Query: 74 DQEYPNHSLAKALIRP-DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
H + D + S+ A + T L G +E+
Sbjct: 61 V---DQHVKVTFRVDELDLTIGSSSEARVVTTTLLGQAALEIRPAGDGNLARGDAIGIER 117
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ T + + ++SD+ ++ E+ + L T+ + ++ VLA
Sbjct: 118 TSSPYDITQALSQLTTEIDDIDVSQLSDAVSTAAEVFEDSPEDLRATVDGVTQLADVLAA 177
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
N + + ++ + ++ + + V Q++EN+++ +
Sbjct: 178 NDAELTNLVGRAREVSGVLADRDAEISTLLRSGDQLLGQLSARRDLVVQLVENVELVATQ 237
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + ++ +
Sbjct: 238 LSALVADNAEILQPTLDQVNGVLDLLNENRE 268
>gi|326527627|dbj|BAK08088.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 412
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 38/111 (34%), Gaps = 4/111 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+VS ++ WL + G+ + +R G+ VG +V
Sbjct: 130 VGLFMVSGAALLALALAWLRGFQLRSRFRKYSAVFEFSQACGICVGTPLRIRGVTVGSVV 189
Query: 70 GLFLDQEYPNHSLAKALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ A + D + ++ + GL T I+++
Sbjct: 190 RVD---SSLRSIDAYVEVEDDKIIVPRNSLVEVNQSGLLMETMIDITPKDP 237
>gi|126436257|ref|YP_001071948.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126236057|gb|ABN99457.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 436
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/281 (9%), Positives = 80/281 (28%), Gaps = 7/281 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + I +V L +++ V + + VG + + +D H+ + +
Sbjct: 28 LPGAEGTGPGATSYTVEI-ANVATLESNAPVLIDDVVVGSVRKMTVD---DWHAEVQISV 83
Query: 88 RPDTPLYPSTTATIRTQGLAGITY--IELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+PD + + AT+ L G + + + + AT + + +
Sbjct: 84 KPDVVVPANAVATVGQTSLLGSMHLALNPPLGESPEGRLQAGATIPLSDSSTYPS-TERT 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + I + I + + + + ++ + Q
Sbjct: 143 LSSLSVVANGGGLGQIGDIIHNFNLALSGREPEIRQLITRLDNFVGVLDAQRENIIASIQ 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + D + + + ++ + ++ V +
Sbjct: 203 QLNRVAGTFAGQRDTIDRALKEIPPALDVLISERPRLTAALDKLGKLGDTAAALVDDAGD 262
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
D+ + + + + D + + + AD
Sbjct: 263 DLVKDLENLGPALGALADIGPDLNLALLWASAFPYGPTFAD 303
>gi|108798627|ref|YP_638824.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867723|ref|YP_937675.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|120401538|ref|YP_951367.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|126434224|ref|YP_001069915.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|108769046|gb|ABG07768.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693812|gb|ABL90885.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|119954356|gb|ABM11361.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|126234024|gb|ABN97424.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 379
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/282 (13%), Positives = 84/282 (29%), Gaps = 8/282 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFF---SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
+ + V+ L F + + L + + +P V+ L +S VR
Sbjct: 8 RAAAVIMIALTVAGLSGCGFRGLNSFRLPGTQGQGQGSYTIQAEMPD-VETLQPNSRVRV 66
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ VG + + H+L + D L ++T ++ L G +IEL+
Sbjct: 67 GDVNVGTVTKIE---RRGWHALLTLALNGDVDLPANSTVSLGQTSLLGSLHIELAPPTDV 123
Query: 121 KKTIFQIATERNQRAMITATPS-GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A A PS + + + +
Sbjct: 124 RPAGKLRAGSLIPLTSAGAYPSTEQTLASVSLLLNGGGVGQVQDITTALTSALGGREADF 183
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + + T AN I ++ T + I D A+ +
Sbjct: 184 RSLLTQLDTFTANVNGQIGDIIAATDSLNNLVAQFAAQKPIIDKALETIPDALAVINAER 243
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+Q++E + ++D V + + + V + +
Sbjct: 244 DQLVEAVDQLGKFSALAADTVNQSQESLIQILNDMGPVLESL 285
>gi|126432883|ref|YP_001068574.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126232683|gb|ABN96083.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 399
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/280 (9%), Positives = 83/280 (29%), Gaps = 5/280 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + +++ +V L ++S V + + VG + + L H+ + +
Sbjct: 34 LPGTVGTGSGATTYRVQL-ANVGTLESNSPVMVSDVVVGTVGKMTL---RGWHADVEVTV 89
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS-GINY 146
RP+T + + AT+ L G ++ L + + + PS
Sbjct: 90 RPETVIPANAVATVGQTSLLGSMHLALDPPVGKMPSGRLQPGTTLGLDRSSTYPSTEQTL 149
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + I++ + + + + + D + +
Sbjct: 150 SSLSVVVNGGGLGQAGDIIREFNATLNGREDKLRDLLVRLRDFVGMLDTQRDDINASLAA 209
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S + + + + ++ + ++ V +T D
Sbjct: 210 LNRLGGSLAGQREVITSALQRIPPALDVLIAERPRLTTALDKLRIFSDSATGLVEDTQAD 269
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + + + + + + + T + + D
Sbjct: 270 LVRNLKNLEPTLKALADVGPNLGTALAYAPTFPYTQGFID 309
>gi|108800633|ref|YP_640830.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119869772|ref|YP_939724.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108771052|gb|ABG09774.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119695861|gb|ABL92934.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 454
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/281 (9%), Positives = 80/281 (28%), Gaps = 7/281 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + I +V L +++ V + + VG + + +D H+ + +
Sbjct: 28 LPGAEGTGPGATSYTVEI-ANVATLESNAPVLIDDVVVGSVRKMTVD---DWHAEVQISV 83
Query: 88 RPDTPLYPSTTATIRTQGLAGITY--IELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+PD + + AT+ L G + + + + AT + + +
Sbjct: 84 KPDVVVPANAVATVGQTSLLGSMHLALNPPLGESPEGRLQAGATIPLSDSSTYPS-TERT 142
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + I + I + + + + ++ + Q
Sbjct: 143 LSSLSVVANGGGLGQIGDIIHNFNLALSGREPEIRQLITRLDNFVGVLDAQRENIIASIQ 202
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + D + + + ++ + ++ V +
Sbjct: 203 QLNRVAGTFAGQRDAIDRALKEIPPALDVLISERPRLTAALDKLGKLGDTATALVEDAGD 262
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
D+ + + + + D + + + AD
Sbjct: 263 DLVKDLENLGPALGALADIGPDLNLALLWASAFPYGPTFAD 303
>gi|326331667|ref|ZP_08197955.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950466|gb|EGD42518.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 372
Score = 52.6 bits (123), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 81/292 (27%), Gaps = 7/292 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ SV + + + + V +++ L S V NG
Sbjct: 20 RRAVLISVAAAGLLLTGCGIDARTLPLPGTRAGDDATTVEAVFDDALN-LGVGSKVSVNG 78
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ GR+V L D ++A+ + + + A +R G Y++++T +
Sbjct: 79 VDAGRVVSLSTDG---YSAVAEMSLEDGVRITDHSAARLRYDTPLGEVYVDVTTPEGGRA 135
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + T P+ + S + + I + T
Sbjct: 136 IPEGGRLDPAR---STTGPTVEDALASASLLINGGGIGDLGRIVDELNRAVGDGTDLAQV 192
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
++ +T L ++ S + + ++ QI
Sbjct: 193 LDRSATFLTQANRTTAEIDRALTSLDAVSATLTKEKKTITDALAAIGPAARTVREQTKQI 252
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + ++ + D + + ++ + D + +
Sbjct: 253 IALLNRLVRLSRDANGVLGRMDDDTVAVVRDAGAILAQVRRISGDLGPGLDT 304
>gi|254818555|ref|ZP_05223556.1| mce related protein [Mycobacterium intracellulare ATCC 13950]
Length = 432
Score = 52.2 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/277 (11%), Positives = 80/277 (28%), Gaps = 11/277 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
++G V ++ L + + + V+ + DGL S V+++G+ VG
Sbjct: 18 VALGA-TVLLIAGLITGSLLLKSTGRLN-DYIRVVAELTNVGDGLPARSDVKYHGLLVGA 75
Query: 68 IVGLFL-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + PN+ + + TA + + ++ ++L
Sbjct: 76 VDNVVPAAYGKPNYVHINLKPEYAKDIPSAVTARVVPSNVFAVSSVQLVDGAP------S 129
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ R S + + + ++ + + + T T+
Sbjct: 130 PSIRNGTRIPEDLQLSTVIFQTTISKLRDILAATGRGREDHSVGILAAVAAATNNRRGTL 189
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL--QKVNQILE 244
A +D++ P S + L + ++ + + + + E
Sbjct: 190 LNAGAQLTRVLDELNAIVTTDPGPSTVSALLDATRGLQATAPDLVDVLHDAVKPMQTLAE 249
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + S T E+ Q +
Sbjct: 250 KREQFRSLVSGSRHTFGVNRQAFDNHTDQLIEMSQNL 286
>gi|227111580|ref|ZP_03825236.1| hypothetical protein PcarbP_01385 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
Length = 879
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 5/94 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + L + + + + Q G + S DG+ + VR+ G+ VG + +
Sbjct: 23 FWLLPLIALMIAGWLIHTNQQERGATVTIDFV---SADGIVAGRTPVRYQGVEVGTVQNI 79
Query: 72 FLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
L ++ A L T + T
Sbjct: 80 KLSEDLRTIQVEASIKSDMKEALRSGTQFWLVTP 113
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 24/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F GI VG + GL L + I + ++ + +
Sbjct: 756 AGALQVGTPVLFRGIEVGTVTGLSL-GTLSDRIAVSLRISKRYQHLVRDNSVFWLASGYN 814
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P N K
Sbjct: 815 LEFGLTGGVIKSGTFQQFIRGGIAFATPPSTPLAPKAQEGKHFLLRNEEPKEWRQ 869
Score = 40.7 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ + V +G+ VG++V LD++ + L R L+ + + ++
Sbjct: 405 GIDSGQPVLLHGVQVGQVVKRTLDEQGVSFLLV-IEPRYRQLLHRDSKFIVNSR 457
>gi|31791773|ref|NP_854266.1| MCE-family protein MCE2C [Mycobacterium bovis AF2122/97]
gi|121636509|ref|YP_976732.1| mce-family protein mce2C [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988981|ref|YP_002643668.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31617360|emb|CAD93468.1| MCE-FAMILY PROTEIN MCE2C [Mycobacterium bovis AF2122/97]
gi|121492156|emb|CAL70621.1| mce-family protein mce2C [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772094|dbj|BAH24900.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length = 481
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 72/249 (28%), Gaps = 5/249 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ + G++T V G+ VG + L + L + P + +
Sbjct: 39 TPTYYAQF-ADMGGINTGDKVEIAGVNVGLVRSLAIRGN---RVLIGFSL-PGKTIGMQS 93
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A IRT + G +E+ E + ++ +
Sbjct: 94 RAAIRTDTILGRKNLEIEPRGSEPLKPNGFLPLAQTTTPYQIYDAFVDVTKAATGWDIDA 153
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ S + + + L+ + ++ S + I++++ ++
Sbjct: 154 VKRSLNVLSETFDQTAPHLSAALEGVKAFSDTVGRRGEQIEQLLANANRIARVLGDRSEQ 213
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ Q + +L N+ +S N H + + +E+
Sbjct: 214 VNGLLVNAKTLLAAFKQRSQALRILLTNVSEASAQVSGLITDNPNLNHVLAQLRTVSEEL 273
Query: 278 GQKIDHLLS 286
++ + L
Sbjct: 274 VKRKNELAD 282
>gi|169628105|ref|YP_001701754.1| putative MCE family protein [Mycobacterium abscessus ATCC 19977]
gi|169240072|emb|CAM61100.1| Putative MCE family protein [Mycobacterium abscessus]
Length = 498
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/94 (15%), Positives = 35/94 (37%), Gaps = 2/94 (2%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ ++ + L + + + V+ + DGL S V+++G+ VG + G+
Sbjct: 1 MIVVAALVTGLMLLKSTGRLN-DFVRVVADLNNVGDGLPQKSDVKYHGVLVGEVDGVTPA 59
Query: 75 QEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
PN + + + TA + +
Sbjct: 60 SNGQPNFVHINLKPQYAKSIPSTATARVVPSNVF 93
>gi|145220613|ref|YP_001131291.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213099|gb|ABP42503.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 372
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 5/96 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V + S GL ++V G+PVG++V + + + + D +
Sbjct: 34 DAITVTAQF-DSAAGLYEGNTVAVLGMPVGKVVRIEP---KGGYVEVEFTVDGDVAVPAD 89
Query: 97 TTA-TIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
A TI L R + T+ T
Sbjct: 90 VQAVTISNSILTDRQIELTPPYRGDGPTLRDHDTIG 125
>gi|120401941|ref|YP_951770.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954759|gb|ABM11764.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 377
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 11/115 (9%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYW------LSRSNQYDGPMAEVIIRIPGSVDGLST 54
M ++ T+ G V + + + L + + ++P V +
Sbjct: 1 MITRRLATT-GALVAVMAAATSGCGWRGANSISLPGTEGGGSGSYTIQAQLPD-VGNIQQ 58
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+S VR + VG + + H++ + D L +TTA I L G
Sbjct: 59 NSRVRLGDVNVGTVTKIE---RQGWHAVLTMKLNGDVALPANTTAAIGQTSLLGS 110
>gi|270261529|ref|ZP_06189802.1| mce-related protein [Serratia odorifera 4Rx13]
gi|270045013|gb|EFA18104.1| mce-related protein [Serratia odorifera 4Rx13]
Length = 840
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/77 (20%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ + V I S G+ + VR+ G+ VG + + L ++ + +A I+
Sbjct: 3 YTNFQERGSTVTIDF-QSAAGIVAGRTPVRYQGVEVGTVQSISLSKD-LRSIVVEASIKS 60
Query: 90 DTP--LYPSTTATIRTQ 104
D L T + T
Sbjct: 61 DLEDSLREGTQFWLVTP 77
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
LS +R+ GI +G++ L L E N LAKA++ P Y T A + ++
Sbjct: 605 DASKLSPGMPLRYLGIDIGQVDSLKLAPER-NEVLAKAVL---YPEYVQTFARLGSRF 658
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 26/78 (33%), Gaps = 6/78 (7%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
++ S DG + GS L + V F G+ VG I G +L I
Sbjct: 701 ITDSRYLDGLSVILDAAETGS---LQVGTPVLFRGMEVGTITGFYLGAMSDR-VHVALRI 756
Query: 88 RPDTP--LYPSTTATIRT 103
+ ++ + +
Sbjct: 757 SKKYQHLVRNNSVFWLAS 774
>gi|302338248|ref|YP_003803454.1| hypothetical protein Spirs_1733 [Spirochaeta smaragdinae DSM 11293]
gi|301635433|gb|ADK80860.1| Mammalian cell entry related domain protein [Spirochaeta
smaragdinae DSM 11293]
Length = 338
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/326 (11%), Positives = 93/326 (28%), Gaps = 9/326 (2%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ VG FV+ L + + + ++ R S + LS ++ G
Sbjct: 6 RFAEQVVGFFVLLALLAVAGLLILMGINQRWFSKDYHFTSRF-ESGNNLSNGMPIKLKGF 64
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT-------IRTQGLAGITYIELST 116
+G + + L ++ + + P++ I + GL
Sbjct: 65 KIGAVDSVTLLEDNTVMIDFHIFDTYYSKVTPNSVLELAVNPLGIGSSGLLFYPGKSQGP 124
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
E I + E +R + + S + ++ + ++ +
Sbjct: 125 PLPENSMIPSLDMEEGKRLVAQSLVSIPKGSDAVSDILVRIGPTIDSLNTLLVSIDDLVH 184
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
A + ++ +++ M V S T + T+
Sbjct: 185 GKNKAPLGSLIRETDTIAANVRAMSDGAVVPVGSILDNVETLTESLKDTTGIVTRLLNPQ 244
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD-FSSKMKSK 295
V ++L + + + ++ ++R E +I LL + + +
Sbjct: 245 GSVAKLLNDNEELYKMMSNILHSLASSAEEIRMLLAFANEKQPQISTLLDQTIDAINQGE 304
Query: 296 ETSAFLENIADSTSNMRSSISAIREI 321
+ L+N + + +
Sbjct: 305 DVLTGLKNNPLLRGGIPKTTAQPTTF 330
>gi|120401937|ref|YP_951766.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954755|gb|ABM11760.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 483
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 45/143 (31%), Gaps = 9/143 (6%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL 71
+ + ++ + N + V ++ S GL V+ G+ VGR+ +
Sbjct: 15 ALLLATGVVVVVFTAASFNGWFRSWIPVTLQSDRS--GLIMEPGGKVKMRGLEVGRVGDV 72
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ + + I P + + +A I + G Y++L +
Sbjct: 73 NAVRGGTS---VELEIDPAYAEFIPSNVSAEIDANTVFGAKYVDLVYPDDPSPQRLKSGQ 129
Query: 130 ERNQRAMITATPSGINYFISNAE 152
R + T + + +
Sbjct: 130 ILRSRNVTTEVNTVFQNLVDLLD 152
>gi|229494619|ref|ZP_04388382.1| MCE family protein [Rhodococcus erythropolis SK121]
gi|229318981|gb|EEN84839.1| MCE family protein [Rhodococcus erythropolis SK121]
Length = 430
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/273 (8%), Positives = 78/273 (28%), Gaps = 5/273 (1%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+V + +P + GL +S+V + G +G + + L + A+ + +
Sbjct: 2 VGIGRYDVTVELPAT-GGLYKNSNVTYRGQTIGVVNAVELSETG---VNARLSLESGVKV 57
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTI-FQIATERNQRAMITATPSGINYFISNAE 152
A +++ G +++L I E T + +
Sbjct: 58 PSDVDAAVKSVSAIGEQFVDLIPHTDSSGAIVVDGHLENGSVIPEDRTSIPQDVGAMLDQ 117
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
S S ++ +I+ K +++ + + + T+ +
Sbjct: 118 ADVLLQSISDTKLKTVIDESFKAFNGAGPDLQKLIDSARLFVEEANNNSDATKTLIEQAG 177
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
++ ++ +++ ++ + + D++ T
Sbjct: 178 PLLDTQVVSSDAIRSWTSNLVTFTDQLRASDPDLRAVIQKGPAAAAEANALLQDMQPTLP 237
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + +++ ++ A
Sbjct: 238 ILLANLVSVGQVGVIYNNAIEQILVIYPPLAAA 270
>gi|90994563|ref|YP_537053.1| hypothetical chloroplast protein 22 [Porphyra yezoensis]
gi|122194652|sp|Q1XDB5|YCF22_PORYE RecName: Full=Uncharacterized protein ycf22
gi|90819127|dbj|BAE92496.1| unnamed protein product [Porphyra yezoensis]
Length = 216
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 40/114 (35%), Gaps = 9/114 (7%)
Query: 1 MESKNYYT---SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M ++ T +G W + NQ + S G+ ++
Sbjct: 1 MRTRYKNTYKEFLGA-CFLGSVTLLSISLW-NIINQAGKNHSYKAFIEFDSAYGIQEGTA 58
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIR-PDTPLYPSTTATIRTQGLAGIT 110
VR G+PVG++VG+ + N L I+ T + ++ GL T
Sbjct: 59 VRLRGLPVGKVVGIS---QSSNSILTSIEIKSSSTIIPKTSLIETNQTGLLNDT 109
>gi|54027026|ref|YP_121268.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54018534|dbj|BAD59904.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 482
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 45/107 (42%), Gaps = 3/107 (2%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
R N Y V + + DGL T + V+F G+ VG + + + + LA+ ++P
Sbjct: 36 RYNGYFEDEVPVTAELTSTGDGLPTRADVKFRGMVVGMVDDVEVVAKGERQ-LARIHLKP 94
Query: 90 DTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
+ + + TA + + G+T IEL T+ AT
Sbjct: 95 EVAPTIPANVTARVIPNNIFGVTAIELVDNGSAGATLTAGATIPEDT 141
>gi|169631227|ref|YP_001704876.1| MCE-family protein LprN [Mycobacterium abscessus ATCC 19977]
gi|169243194|emb|CAM64222.1| Hypothetical MCE-family protein LprN [Mycobacterium abscessus]
Length = 388
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/277 (11%), Positives = 79/277 (28%), Gaps = 6/277 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL--DQEYPNHSLAKA 85
L + + V + +P V L +S V + + VG + G+ + ++ K
Sbjct: 32 LPGTAGHGSRSYTVTVELPD-VTTLPQNSPVMVDDVTVGSVSGIDAFQKPDGSWYAGVKV 90
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATERNQRAMITATPSG 143
+ P+ L + A + L G +IE + AT R +
Sbjct: 91 SLEPEVHLPANAVAKVAQTSLLGSQHIELAAPVGEPAVGKLTGGATIPLSRTGKYPSTEE 150
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ + + + + + ++T++++ S D ++
Sbjct: 151 V-LSALSVVVNKGNLGALQDITDETYNLFKGRTGNLTQVLPKLATLISSLNSQRDDIISA 209
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+ S + + + I+E + N + + T
Sbjct: 210 IEGIDKFSRVLAEHKESLGRAIDSIEPALKVLNENRANIIEAFRSVGNLAKITDRVLRTT 269
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
D+ + V + + + T F
Sbjct: 270 KDDIVADLKGLYPVVRALAENRDVLIDSLDLLPTFPF 306
>gi|271964519|ref|YP_003338715.1| resistance to organic solvents ABC transporter periplasmic
component-like protein [Streptosporangium roseum DSM
43021]
gi|270507694|gb|ACZ85972.1| ABC-type transport system involved in resistance to organic
solvents periplasmic component-like protein
[Streptosporangium roseum DSM 43021]
Length = 363
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/84 (15%), Positives = 25/84 (29%), Gaps = 4/84 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+ L + V+ G+ G + L ++ + A +I + PL
Sbjct: 46 GASPYRLTAYFSA-APSLYEQAKVKVLGLDAGTVEKLTVEGD---RVRADLVIDGEVPLP 101
Query: 95 PSTTATIRTQGLAGITYIELSTLR 118
A + Q G + L
Sbjct: 102 ADVKAVVAAQNTLGERNVVLHPPW 125
>gi|120403839|ref|YP_953668.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956657|gb|ABM13662.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 399
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/260 (11%), Positives = 83/260 (31%), Gaps = 4/260 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+V L ++S V N + VG + + + H+ ++PD + + AT+ L
Sbjct: 54 NVGTLESNSPVMLNDVVVGAVRKMTV---NDFHADVDVSVKPDVVVPANAVATVGQTSLL 110
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPS-GINYFISNAENTSKKISDSSRHIQ 166
G ++ L E T + PS + ++ I
Sbjct: 111 GSMHVALDPPVGESPTGRLQPGASVPIDRTSTYPSTEQTLSSLSVVVNGGGLTQIGDIIG 170
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
++ + ++ V+ + ++ T +++ + S
Sbjct: 171 NFNAALDGRQIQIRDLLTRMNDVVGILDNQRANIIDTIGALNRLAETFANQREVLTAALS 230
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ ++ +I+ +Q + ++ + + D+ Q + + + +
Sbjct: 231 RIPQALEVLNRQRPRIVTAMQKLGDFSDTATQLINESQEDIVRNLQNLEPAVRALADVGP 290
Query: 287 DFSSKMKSKETSAFLENIAD 306
D ++ + T + + D
Sbjct: 291 DLATALSYLPTYPYTQEFID 310
>gi|296141470|ref|YP_003648713.1| hypothetical protein Tpau_3796 [Tsukamurella paurometabola DSM
20162]
gi|296029604|gb|ADG80374.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 357
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 3/73 (4%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+GL S V G+ VG + L +D E + DT + ++
Sbjct: 44 TDANGLMQGSRVLDRGVEVGTVRALRVDAE---RVEVEVGYDRDTRIRSGAKVRVQNLSG 100
Query: 107 AGITYIELSTLRK 119
G TY+ LS
Sbjct: 101 LGETYLTLSQGDG 113
>gi|289645127|ref|ZP_06477151.1| virulence factor Mce family protein [Frankia symbiont of Datisca
glomerata]
gi|289505067|gb|EFD26142.1| virulence factor Mce family protein [Frankia symbiont of Datisca
glomerata]
Length = 421
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/144 (15%), Positives = 44/144 (30%), Gaps = 11/144 (7%)
Query: 9 SVGLFVVSILFFSFFS-------IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
V L + + + L + V I + + + ++ V +
Sbjct: 12 WVALVTAAAMTAVLTGCGFESLNSFHLPGTKGSGPGSYTVRIEL-RNALNVVPNTPVMVD 70
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VG I + L ++ + D L + TATI L G +IEL+ +++
Sbjct: 71 DVTVGTIRSVEL---KDWTAVVTVSLDKDVVLPENATATIGQTSLLGAKHIELAPPTQDE 127
Query: 122 KTIFQIATERNQRAMITATPSGIN 145
P +
Sbjct: 128 PVGRLHDGSVVPITRSGHYPETED 151
>gi|261821412|ref|YP_003259518.1| hypothetical protein Pecwa_2137 [Pectobacterium wasabiae WPP163]
gi|261605425|gb|ACX87911.1| Mammalian cell entry related domain protein [Pectobacterium
wasabiae WPP163]
Length = 880
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + IY A V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLIY-----TNQQERGATVTIDFV-SADGIVAGRTPVRYQGVEVGTVQNIKL 81
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
++ A L T + T
Sbjct: 82 SEDLRTIQVEASIKSDMKEALRSGTQFWLVTP 113
Score = 43.0 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 26/114 (22%), Gaps = 1/114 (0%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGLA 107
L + V F GI VG + GL L ++ + R + ++ +
Sbjct: 756 AGALQVGTPVLFRGIEVGTVTGLSLGTLSDRIAISLRISKRYQHLVRDNSVFWQASGYNL 815
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + P N K
Sbjct: 816 EFGLVGGVIKSGTFQQFIRGGIAFATPPSTPLAPKAQEGKHFLLRNEEPKEWRQ 869
Score = 41.8 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ + V +G+ +G++V LD++ + L R L+ + + ++
Sbjct: 405 GIDSGQPVLLHGVQIGQVVKRTLDEQGVSFVLV-IEPRYRQLLHRDSKFIVNSR 457
>gi|330827997|ref|YP_004390949.1| Toluene tolerance protein TTG2C [Aeromonas veronii B565]
gi|328803133|gb|AEB48332.1| Toluene tolerance protein TTG2C [Aeromonas veronii B565]
Length = 165
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 2/124 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-DGPMAEVIIRIPGSVDGLSTDSSVR 59
M+ VG F+++ + ++ + +G + ++ GL S V+
Sbjct: 1 MKFSKVEFLVGTFMLAGIGAILALALQVAGLSFKPEGETYTLRAHF-DNIGGLKVRSPVK 59
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G+ VGR+ + LD + + + + +++ +I T GL G YI L+
Sbjct: 60 VGGVVVGRVSDIVLDPQTQVPEVTLMMQKSAGQFADTSSLSILTSGLLGEQYIGLAPGFS 119
Query: 120 EKKT 123
+++
Sbjct: 120 DEEM 123
>gi|319950497|ref|ZP_08024410.1| Mce family lipoprotein Mce4E [Dietzia cinnamea P4]
gi|319435856|gb|EFV91063.1| Mce family lipoprotein Mce4E [Dietzia cinnamea P4]
Length = 418
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/88 (25%), Positives = 38/88 (43%), Gaps = 2/88 (2%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y L V +R V L SSV+ NG+ GR+ G+ L ++ +
Sbjct: 36 YTLPGGADLGENPMHVAVRF-DDVLDLVLQSSVKVNGLDAGRVSGISLAEDG-WTAEVDI 93
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIE 113
++R D L + A+I+ L G +++
Sbjct: 94 VVRGDMGLPANVEASIQQTNLLGEKFVQ 121
>gi|296165209|ref|ZP_06847756.1| Mce family protein Mce5F [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295899398|gb|EFG78857.1| Mce family protein Mce5F [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 360
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/84 (16%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
GL + V G+ VGR+ L + A A I + ++ + AG
Sbjct: 7 GGLLPNQDVSQRGVRVGRVESLQITDNG---VNAIARITSKVRIPANSVVHVSALSPAGE 63
Query: 110 TYIELSTLRKEKKTIFQIATERNQ 133
+I + + +
Sbjct: 64 QFINFEAASDAGPYLHDGSIITSD 87
>gi|328880856|emb|CCA54095.1| putative secreted protein [Streptomyces venezuelae ATCC 10712]
Length = 417
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 10/128 (7%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIPVGRIV 69
G+ + + + + D ++ GSV + + V+ G+ +G +
Sbjct: 15 GVVFLLVPALLAWLAVAVYDKKFTDSDP---VVVETGSVGNEMHLGAEVKLRGVVIGEVR 71
Query: 70 GLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQ 126
+ + +RP T + A + L G ++ + K +
Sbjct: 72 AIDAV---DGGARLTLAMRPGTLRHVPSDVRAQMLPTTLFGERFVALVPPGNPSAKPLGP 128
Query: 127 IATERNQR 134
A R
Sbjct: 129 GAVIPEDR 136
>gi|281192549|gb|ADA57463.1| Mce [Leptospira weilii serovar Manhao II]
Length = 251
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/118 (13%), Positives = 35/118 (29%), Gaps = 15/118 (12%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
Y VG+ + + ++ + + + +G+ + V G+P
Sbjct: 7 RYLLVGIIFTAAIT-VVGYFTIITEGGPIKKKGEFMKVTF-RNAEGIKVGNKVTVQGVPF 64
Query: 66 GRIVGLFL---DQEYP----------NHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G + + L D+ L+R LY + I+ + L
Sbjct: 65 GYVSAIRLIQIDENGTEVQSGEMGIGTRVEITMLLREKISLYDNYDIIIKNESLLTGR 122
>gi|146312050|ref|YP_001177124.1| hypothetical protein Ent638_2404 [Enterobacter sp. 638]
gi|145318926|gb|ABP61073.1| Mammalian cell entry related domain protein [Enterobacter sp. 638]
Length = 877
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/91 (19%), Positives = 28/91 (30%), Gaps = 7/91 (7%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLD 74
I + W Y+ V I DG+ + VRF G+ VG + + L
Sbjct: 28 VIALMIAGWLIW----TSYEDRGNTVTIDFQT-ADGIVAGRTPVRFQGVEVGTVQDIRLG 82
Query: 75 QE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
++ A L T + T
Sbjct: 83 KDLNKIEVRASIKADMQDALRSETQFWLVTP 113
Score = 40.7 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 30/123 (24%), Gaps = 4/123 (3%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTT 98
+++ +P +S + V F GI VG + GL L + + I + ++
Sbjct: 750 IVVEVPE-AGSMSIGTPVLFRGIEVGTVTGLTL-GTLSDRVMVGLRISERFQHLVRNNSV 807
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ + + P + K
Sbjct: 808 FWMASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQTGKHFLLLESEPKE 867
Query: 159 SDS 161
Sbjct: 868 WRE 870
>gi|41408214|ref|NP_961050.1| Mce3 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41396569|gb|AAS04433.1| Mce3 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 422
Score = 52.2 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 8/122 (6%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQ 75
LF + L+ ++ V + + GL + V+ G+ +G++ +
Sbjct: 29 LFIVIGGLVALTAASFSGKFQTFVPLTLVSDRAGLVMEDGAKVKLRGVQIGQVASI---G 85
Query: 76 EYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELS-TLRKEKKTIFQIATERN 132
+ + I+P L + A I++ G +++L R + A R+
Sbjct: 86 TDVKTARLQLKIQPGPFRYLPSNLEAEIKSTTAFGSKFVDLIVPERPSASPLKPGAVLRS 145
Query: 133 QR 134
+
Sbjct: 146 RN 147
>gi|312958791|ref|ZP_07773310.1| PqiB family protein [Pseudomonas fluorescens WH6]
gi|311286561|gb|EFQ65123.1| PqiB family protein [Pseudomonas fluorescens WH6]
Length = 767
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
++V+ ++ WL Y E+ +R S +G+ + + V + G+PVG++
Sbjct: 18 IWVLPLIALIIGG--WLG-WRAYSQQGIEIQVRF-ESGEGIQVNKTEVVYKGMPVGKVKA 73
Query: 71 LFLDQEYPNH-SLAKALIRPDTP--LYPSTTATI 101
L LD E N +A + D L +T +
Sbjct: 74 LALDDEGNNRGVIATIEMNKDVDQYLKTNTRFWL 107
Score = 45.7 bits (105), Expect = 0.013, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 40/128 (31%), Gaps = 1/128 (0%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AK 84
+ L + +I DGL ++VRF G+ VG+I + L + + L A+
Sbjct: 506 FRLFADREAANQHGTLITLKVDRADGLRPGTAVRFKGLDVGKIESVDLSADMQSVLLSAR 565
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
D T I L + L TL + Q A +
Sbjct: 566 ITQVADRIARVGTQFWIVKPELGLMKTSNLETLVTGQYIEVQPAAKSAGPQKSFVALDQP 625
Query: 145 NYFISNAE 152
+ +
Sbjct: 626 PEAVHQEQ 633
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ S+ L S + + + VG + ++ + + + ST
Sbjct: 400 VLFTDSLGSLDVGSPILYKQVKVGSVQSYQFSRKNKQLVIGVHIEKEYENLVNGSTRFWN 459
Query: 102 RT 103
+
Sbjct: 460 AS 461
Score = 39.9 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L V + + VG++ G L + + L LI P
Sbjct: 647 LKEGVPVTYREVTVGKVTGYEL-GQTADRVLVHILIEPKY 685
Score = 37.6 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 13/134 (9%), Positives = 30/134 (22%), Gaps = 1/134 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + I VG++ L ++ + + T +
Sbjct: 170 LNRGSPVFYKQIQVGQVKSYLLSEDQSTVEIKVYIEPTYASLVRKHTRFWNASGISIDAN 229
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +I +P + R K+ +
Sbjct: 230 LSGVKVRSESLSSIVAGGIAFATPENRKDSPPTDPSLPFRLYEDFDAAAAGIRVKVKLTD 289
Query: 171 NIEKPLTTTIANIE 184
T +
Sbjct: 290 FEGLQAGRTPVMYK 303
>gi|120401388|ref|YP_951217.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954206|gb|ABM11211.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 454
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/124 (12%), Positives = 37/124 (29%), Gaps = 8/124 (6%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFL 73
IL + + + + V + + GL + V+ G+ VGR+ +
Sbjct: 17 LILVAALSVFVAATAAAFTGIFRSYVPVTLTSDRAGLVMENGARVKMRGVQVGRVAEIR- 75
Query: 74 DQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATE 130
+ I P+ + + A I G +++ + + A
Sbjct: 76 --GGTGPAELLLEIDPEQIARIPANVQAQISVTTAFGSKFVDLVPPEHPSTDRLAAGAVL 133
Query: 131 RNQR 134
+
Sbjct: 134 MSTN 137
>gi|108799500|ref|YP_639697.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119868613|ref|YP_938565.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108769919|gb|ABG08641.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119694702|gb|ABL91775.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 431
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + I +V L +++ V + + VG + + +D H+ + +
Sbjct: 43 LPGAEGTGPGATSYTVEI-ANVATLESNAPVLIDDVVVGSVRKMTVD---DWHAEVQISV 98
Query: 88 RPDTPLYPSTTATIRTQGLAGITY--IELSTLRKEKKTIFQIATER 131
+PD + + AT+ L G + + + + AT
Sbjct: 99 KPDVVVPANAVATVGQTSLLGSMHLALNPPLGESPEGRLQAGATIP 144
>gi|126435154|ref|YP_001070845.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126234954|gb|ABN98354.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 431
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 6/106 (5%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + I +V L +++ V + + VG + + +D H+ + +
Sbjct: 43 LPGAEGTGPGATSYTVEI-ANVATLESNAPVLIDDVVVGSVRKMTVD---DWHAEVQISV 98
Query: 88 RPDTPLYPSTTATIRTQGLAGITY--IELSTLRKEKKTIFQIATER 131
+PD + + AT+ L G + + + + AT
Sbjct: 99 KPDVVVPANAVATVGQTSLLGSMHLALNPPLGESPEGRLQAGATIP 144
>gi|257054444|ref|YP_003132276.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584316|gb|ACU95449.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 438
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/119 (12%), Positives = 37/119 (31%), Gaps = 1/119 (0%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ ++ N+ V ++ + L+ +S V+ G+ VGR+ +
Sbjct: 14 VAILVGGIALSIAVYNRAFTDHVTVRVQAGEIGNQLAPNSDVKVRGLIVGRVHAVEPSPT 73
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQR 134
+ + + + +A + L G Y++ R + R
Sbjct: 74 GGAELVLHLDPGQASLVPANVSARFLPKTLFGERYVDLTIPERPSTTGLADGTVIPQDR 132
>gi|296101830|ref|YP_003611976.1| hypothetical protein ECL_01467 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295056289|gb|ADF61027.1| hypothetical protein ECL_01467 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 879
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 9/92 (9%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLD 74
I + W Y+ + + I S DG+ + VRF G+ VG + + L
Sbjct: 30 VIALMIAGWLIW----TSYEDRGSTITIDF-QSADGIVAGRTPVRFQGVEVGTVQDISL- 83
Query: 75 QEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ N +A I+ D L T + T
Sbjct: 84 GKGLNKIQVRASIKSDMQDALRSETQFWLVTP 115
Score = 44.5 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 30/123 (24%), Gaps = 4/123 (3%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTT 98
+++ +P LS + V F GI VG + GL L + + I + ++
Sbjct: 752 IVVEVPE-AGSLSIGTPVLFRGIEVGTVTGLTL-GTLSDRVMVALRISDRYQHLVRNNSV 809
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ + + P + K
Sbjct: 810 FWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQPGKHFLLLESEPKE 869
Query: 159 SDS 161
Sbjct: 870 WRE 872
>gi|253688236|ref|YP_003017426.1| Mammalian cell entry related domain protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251754814|gb|ACT12890.1| Mammalian cell entry related domain protein [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 880
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + IY A V I S DG+ + VR+ G+ VG + + L
Sbjct: 28 LIALMIAGWLIY-----TNQQERGATVTIDFV-SADGIVAGRTPVRYQGVEVGTVQNIKL 81
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
++ A L T + T
Sbjct: 82 SEDLRTIQVEASIKSDMKEALRSGTQFWLVTP 113
Score = 43.4 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 24/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F GI VG + GL L + I + ++ +
Sbjct: 756 AGALQVGTPVLFRGIEVGTVTGLSL-GTLSDRIAVSLRISKRYQHLVRDNSVFWQASGYN 814
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + P N K
Sbjct: 815 LEFGLVGGVIKSGTFQQFIRGGIAFATPPSTPLAPKAQEGKHFLLRNEEPKEWRQ 869
Score = 40.7 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ + V +G+ +G++V LD++ + L R L+ + + ++
Sbjct: 405 GIDSGQPVLLHGVQIGQVVKRTLDEQGVSFILV-IEPRYRQLLHRDSKFIVNSR 457
>gi|296141468|ref|YP_003648711.1| hypothetical protein Tpau_3794 [Tsukamurella paurometabola DSM
20162]
gi|296029602|gb|ADG80372.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 371
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/123 (13%), Positives = 34/123 (27%), Gaps = 7/123 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+GL V + + + + + + GL D+ V G+ +G +
Sbjct: 15 RIGLLTVVTMLALTAVPFTAGTAQAASSST--LCAYLADGI-GLYPDNDVTQMGVKIGSV 71
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + L S A R+ + +EL T+
Sbjct: 72 RTVEPQDDG---VKVTFEV-SGRTLPASVKAVTRSTSILADRTLELVGNYASGPTLGPET 127
Query: 129 TER 131
Sbjct: 128 CIG 130
>gi|323491743|ref|ZP_08096920.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
brasiliensis LMG 20546]
gi|323313999|gb|EGA67086.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
brasiliensis LMG 20546]
Length = 158
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 2/117 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKIELWVGSFVLAGICAILVMIFQVADVKGLGSNDTYTLNAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
+ VGR+ + L+ E I +++ I T GL G YI L+
Sbjct: 64 VVVGRVSAINLNSESLLPV-VTMAINSTYNQFPETSSVKILTSGLIGEQYIGLTPGF 119
>gi|118467175|ref|YP_881278.1| virulence factor Mce [Mycobacterium avium 104]
gi|254774786|ref|ZP_05216302.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
gi|118168462|gb|ABK69359.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 422
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 44/122 (36%), Gaps = 8/122 (6%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQ 75
LF + L+ ++ V + + GL + V+ G+ +G++ +
Sbjct: 29 LFIVIGGLVALTAASFSGKFQTFVPLTLVSDRAGLVMEDGAKVKLRGVQIGQVASI---G 85
Query: 76 EYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELS-TLRKEKKTIFQIATERN 132
+ + I+P L + A I++ G +++L R + A R+
Sbjct: 86 TDVKTARLQLKIQPGPFRYLPSNLEAEIKSTTAFGSKFVDLIVPERPSASPLKPGAVLRS 145
Query: 133 QR 134
+
Sbjct: 146 RN 147
>gi|302841514|ref|XP_002952302.1| hypothetical protein VOLCADRAFT_62179 [Volvox carteri f.
nagariensis]
gi|300262567|gb|EFJ46773.1| hypothetical protein VOLCADRAFT_62179 [Volvox carteri f.
nagariensis]
Length = 312
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/143 (13%), Positives = 45/143 (31%), Gaps = 5/143 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VGLF+++ + + W + G + I P G++ + VR G+ VG+++
Sbjct: 29 VGLFLLAGSAAAVALVAWARGNAMRTGTPYKATIEFPL-ACGITIGTPVRVRGVQVGQVL 87
Query: 70 GLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ E + T + ++ GL ++++
Sbjct: 88 AVKPSLE---RVDVLVEVNDVSTVIPRNSVIEANQSGLIAEPLVDITPQFPVPSYTALPH 144
Query: 129 TERNQRAMITATPSGINYFISNA 151
+ + +G
Sbjct: 145 EPQCAEEGVLVCDNGHIPGRQGV 167
>gi|310767839|gb|ADP12789.1| Uncharacterized protein yebT [Erwinia sp. Ejp617]
Length = 877
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + F+ ++ + W Y V I + DG+ + VR+
Sbjct: 17 RRRISPFWLLPFIALLIA---GWLLW----TNYQQRGTTVTIDF-ATADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + G+ + + KA I+ D L +T + T
Sbjct: 69 QGVEVGLVEGISMT-DNLRTIKIKASIKSDMREALRENTQFWLVTP 113
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 26/112 (23%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
LS + V F G+ VG + G L + I + +T + +
Sbjct: 760 LSVGTPVLFRGVEVGTVTGTAL-GTMADRVQITLRISKKYQHLVRNNTLFWLASGYNLKF 818
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ Q + P + E+
Sbjct: 819 GLTGGVVKTGTFQQFIQGGIAFATPPTVPLAPPASSGKHFLLEDEEPGGWRQ 870
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ GL++ S V F IPVGR+ ++ LI
Sbjct: 169 DLGGLNSGSLVYFRKIPVGRVYDYSINAGSKG-VTVDILIER 209
>gi|326331671|ref|ZP_08197959.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950470|gb|EGD42522.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 342
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 39/135 (28%), Gaps = 4/135 (2%)
Query: 3 SKNYYTSV-GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
++ +V G V + + LS + + + L T S V+
Sbjct: 5 TRPQTLAVRGAAGVLVCGLLAAGMIVLSG--RPFADVVATRAAMVDVGASLRTGSDVKMG 62
Query: 62 GIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G + G+ E + L A + G Y++L +
Sbjct: 63 GVVIGTVTGISPAAESSTASVAIRLDGEAAERLPADVAARALPATVFGTAYVDLVSTGSR 122
Query: 121 KKTIFQIATERNQRA 135
++ R
Sbjct: 123 PGRWEGGTIPQDLRQ 137
>gi|291617714|ref|YP_003520456.1| YebT [Pantoea ananatis LMG 20103]
gi|291152744|gb|ADD77328.1| YebT [Pantoea ananatis LMG 20103]
Length = 891
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 9/92 (9%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLD 74
I + W + + I DG+ + +R+ G+ VG + G+ L
Sbjct: 40 IIAMLIAGWLLW----TNFQERGTTITINFQT-ADGIVPGRTPIRYQGVEVGTVQGINLS 94
Query: 75 QEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ KA I+ D L +T + T
Sbjct: 95 -DDYKKIQIKASIKSDMRDALRENTQFWLVTP 125
Score = 44.2 bits (101), Expect = 0.039, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
LS + V F G+ VG + G L + I + ++ + +
Sbjct: 767 AGSLSLGTPVLFRGVEVGTVTGTSL-GNMADRVQIALRISKKYQHLVRNNSVFWLASGYN 825
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + + + P + ++ K +
Sbjct: 826 LDFGLIGGVVKTGTFQQFIRGGIQFATPPTVPLAPQATSNKHFLLQDEPPKDWRN 880
Score = 40.7 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
LS +R+ GI VG+I L L +
Sbjct: 653 DASKLSAGMPIRYLGINVGQIESLSLSDDNNQVV 686
>gi|261211080|ref|ZP_05925369.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
sp. RC341]
gi|260839581|gb|EEX66192.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
sp. RC341]
Length = 163
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 45/130 (34%), Gaps = 2/130 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + I+ ++ + ++ L S V+ G
Sbjct: 4 TRKIEFWVGSFVLAGICAILVMIFQVADVKGLGASDTYRLTAEFDNIGSLKVRSPVKVGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ + L+++ I +++ I T GL G Y+ L
Sbjct: 64 VVVGRVESIALNKKSL-LPTVTLAIDSQYNQFSENSSLQILTSGLIGEQYLSLVPGFVLD 122
Query: 122 KTIFQIATER 131
+R
Sbjct: 123 DEAMLKDGDR 132
>gi|254819659|ref|ZP_05224660.1| hypothetical protein MintA_07039 [Mycobacterium intracellulare ATCC
13950]
Length = 527
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/99 (18%), Positives = 34/99 (34%), Gaps = 3/99 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
VG+ VV + + S V+ + DGL S V+++G+ VG +
Sbjct: 20 VGIAVVVVSALVTAMMLVKSTGRL--NDYVRVVADLINVGDGLPQKSDVKYHGVLVGMVN 77
Query: 70 GLFLDQEY-PNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ PN+ + + TA + +
Sbjct: 78 DVVPAAHGEPNYVHIDLKPEYAQAIPAAVTARVVPSNVF 116
>gi|118468562|ref|YP_890752.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118169849|gb|ABK70745.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 413
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/90 (23%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLS--TDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLA 83
W+ ++ I + S GLS S V FNG+P+GR+ G+ + + + +
Sbjct: 43 WMQFRGDFEDKA---EITLFASRSGLSMDPGSKVTFNGVPIGRLKGVDVVEVDDNPEARL 99
Query: 84 KALIRPDT--PLYPSTTATIRTQGLAGITY 111
I P + + A +R + G Y
Sbjct: 100 TLDIDPKYLDLIPANAVAELRATTVFGNKY 129
>gi|296394449|ref|YP_003659333.1| mammalian cell entry-like domain-containing protein [Segniliparus
rotundus DSM 44985]
gi|296181596|gb|ADG98502.1| Mammalian cell entry related domain protein [Segniliparus rotundus
DSM 44985]
Length = 375
Score = 51.9 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/338 (9%), Positives = 89/338 (26%), Gaps = 12/338 (3%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
F WL R GL ++V G+ VG+++ + +
Sbjct: 19 GLGFGANWLLAKKIAPKRTICATFR---DGFGLYPGNNVSLLGVDVGKVLSVEPQGD--- 72
Query: 80 HSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
+ + L A I T T + F + T
Sbjct: 73 VVKTIIELPKELELPADVKA-ISTGSSVVADMRVELTKGYKDGPKFTGEHCLEAKNGDTK 131
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
TP + + N ++ ++ Q + + + + +
Sbjct: 132 TPVPPSRTLETLSNFIDGLTGNADPNQSVGQIATLLRRVQESIAGKGPEINEVFRKSMRL 191
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
P D + + + + ++M + L+ + +F K+
Sbjct: 192 FNTDVFPEPLLVDLIENLDLLLRELNTTNRMDLLTVQSNIQGFLKFQIKFNTSFSKAIYA 251
Query: 260 VINTVHDVRETTQTFQEVGQK-----IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
+ + + Q + + + L + + + + + ++ +
Sbjct: 252 DAEVLSSLSYSVQRIEPALARFLQLLMPALHRMLNLLNDNIDFLEQIPTLLNNWQAVFDP 311
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + +++ + +N S + A +
Sbjct: 312 RIDPGAQSFGPATLDLAVSSAKGTCEWMNTFSPRIAPI 349
>gi|148358386|ref|YP_001249593.1| hypothetical protein LPC_0250 [Legionella pneumophila str. Corby]
gi|296105736|ref|YP_003617436.1| probable transmembrane protein [Legionella pneumophila 2300/99
Alcoy]
gi|148280159|gb|ABQ54247.1| probable transmembrane protein; conserved hypothetical protein
[Legionella pneumophila str. Corby]
gi|295647637|gb|ADG23484.1| probable transmembrane protein [Legionella pneumophila 2300/99
Alcoy]
Length = 228
Score = 51.5 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 43/134 (32%), Gaps = 9/134 (6%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ +++ ++ GS+ GL T + V + G+ +G + + + + +
Sbjct: 2 ILGGTFFYI---EYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEVKVIEITENKEH 58
Query: 80 H-----SLAKALIRPDTPLYPSTTA-TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + I +A IT L T E + I T + +
Sbjct: 59 SKVLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPTVKYR 118
Query: 134 RAMITATPSGINYF 147
+ + P +
Sbjct: 119 QTYYHSYPVFPTHN 132
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 14/159 (8%), Positives = 50/159 (31%), Gaps = 11/159 (6%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + + + T L ++ + + T + + ++
Sbjct: 80 DPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPTVKYRQTYYHSYPVFPTHNSAEKYTS 139
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ ++ + + ++ + KE + Q+ + +N+ +PS+ L
Sbjct: 140 MEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQ-- 197
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++++ + + R P+ ++ G+
Sbjct: 198 ---------SLKQITSAAYSTQNLTDYLSRYPESLLRGK 227
>gi|296169579|ref|ZP_06851199.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295895845|gb|EFG75540.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 387
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/273 (6%), Positives = 74/273 (27%), Gaps = 7/273 (2%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRI 68
GL ++ + V + P GL + D+ V+ G+ VG++
Sbjct: 3 GLATIAFVGLIVAIAI--GLFQGDFTKTVPVTVVSPR--AGLVMNPDAKVKMRGVEVGKV 58
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQI 127
+ + + I + + G ++E + + +
Sbjct: 59 ASTDVRPNGQAVLHLAMQPSQMHLIPANVLVDIASTTVFGAKFVELVPPAEPSPRPLRSG 118
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ + + K++++ I + + + +++++
Sbjct: 119 QVLEAEHVTVEINSVFEELTSVLSRIDPAKLNETLGAIASAVNGRGQKIGQMLSDLDDFL 178
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
++ + + ++ T + + + ++ +L +
Sbjct: 179 ATQDPSLPALRHDLAVLPEVANAYADAAPDLVRTAQNATRISQTIVDERRNLDALLISTI 238
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
++ + + D ++ +
Sbjct: 239 GLADIGNEVVGGNRQALTDALHVAVPTTDLLNE 271
>gi|54024942|ref|YP_119184.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54016450|dbj|BAD57820.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 351
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/102 (16%), Positives = 32/102 (31%), Gaps = 4/102 (3%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + + + + GL D+ V G+ VGR+ + + H + +
Sbjct: 29 RLERTPTRALCALFDTTFGLYDDAPVTVRGVTVGRVHAIVPEG---GHVRVEMTVER-RR 84
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
L T AT+ L +EL + R
Sbjct: 85 LSEHTVATVVNASLLTDRRVELVDSDGPGAELPAEGCLPTDR 126
>gi|217973075|ref|YP_002357826.1| Mammalian cell entry related domain-containing protein [Shewanella
baltica OS223]
gi|217498210|gb|ACK46403.1| Mammalian cell entry related domain protein [Shewanella baltica
OS223]
Length = 879
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 23 IVALALGAWLG-IKSIKESGVEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDEDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVMMDYRAKPFLNKETLFWLVTP 108
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S + F IPVG +V LD A + + ++
Sbjct: 168 LDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFW 216
>gi|153000965|ref|YP_001366646.1| hypothetical protein Shew185_2446 [Shewanella baltica OS185]
gi|151365583|gb|ABS08583.1| Mammalian cell entry related domain protein [Shewanella baltica
OS185]
Length = 879
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 23 IVALALGAWLG-IKSIKESGVEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDEDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVMMDYRAKPFLNKETLFWLVTP 108
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S + F IPVG +V LD A + + ++
Sbjct: 168 LDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFW 216
>gi|160875678|ref|YP_001554994.1| hypothetical protein Sbal195_2566 [Shewanella baltica OS195]
gi|160861200|gb|ABX49734.1| Mammalian cell entry related domain protein [Shewanella baltica
OS195]
gi|315267867|gb|ADT94720.1| Mammalian cell entry related domain protein [Shewanella baltica
OS678]
Length = 879
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 23 IVALALGAWLG-IKSIKESGVEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDEDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVMMDYRAKPFLNKETLFWLVTP 108
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S + F IPVG +V LD A + + ++
Sbjct: 168 LDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFW 216
>gi|126174666|ref|YP_001050815.1| hypothetical protein Sbal_2453 [Shewanella baltica OS155]
gi|125997871|gb|ABN61946.1| Mammalian cell entry related domain protein [Shewanella baltica
OS155]
Length = 879
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 23 IVALALGAWLG-IKSIKESGVEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDEDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVMMDYRAKPFLNKETLFWLVTP 108
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S + F IPVG +V LD A + + ++
Sbjct: 168 LDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFW 216
>gi|311744832|ref|ZP_07718628.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311311949|gb|EFQ81870.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 473
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 39/106 (36%), Gaps = 8/106 (7%)
Query: 11 GLFVV-SILFFSFFSIYWL--SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
GL V+ WL + N+ + EV + P + L T + V+ G+ VG
Sbjct: 7 GLKVLGIGFIALLIFFVWLTAAFFNKTFVDVEEVTLNAPNTGQQLPTAADVKLRGMIVGE 66
Query: 68 IVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
+ + + I+P+ + TA I + L G Y
Sbjct: 67 VREIVPSDDG---VTMTLGIKPEMLDDIPAGVTAQILPKTLFGEKY 109
>gi|292488501|ref|YP_003531385.1| hypothetical protein EAMY_2027 [Erwinia amylovora CFBP1430]
gi|292899687|ref|YP_003539056.1| hypothetical protein EAM_1977 [Erwinia amylovora ATCC 49946]
gi|291199535|emb|CBJ46652.1| conserved hypothetical protein [Erwinia amylovora ATCC 49946]
gi|291553932|emb|CBA20977.1| Uncharacterized protein yebT [Erwinia amylovora CFBP1430]
gi|312172645|emb|CBX80901.1| Uncharacterized protein yebT [Erwinia amylovora ATCC BAA-2158]
Length = 877
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 33/105 (31%), Gaps = 10/105 (9%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + F+ ++ + W Y V I + DG+ + VR+
Sbjct: 17 RRRISPFWLLPFIALLIA---GWLLW----TNYQQRGTTVTIDF-ATADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ VG + + + + A L +T + T
Sbjct: 69 QGVEVGLVEDISMTDDLRTIKIKASIKSNMKEALRENTQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 26/112 (23%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
LS + V F G+ VG + G L + I + +T + +
Sbjct: 760 LSVGTPVLFRGVEVGTVTGTAL-GTMADRVQISLRISKKYQHLVRNNTVFWLASGYNLKF 818
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ Q + P + EN
Sbjct: 819 GLTGGVVKTGTFQQFIQGGIAFATPPTVPLAPQASSGKHFLLENEEPGGWRQ 870
>gi|319950483|ref|ZP_08024396.1| putative Mce family protein [Dietzia cinnamea P4]
gi|319435842|gb|EFV91049.1| putative Mce family protein [Dietzia cinnamea P4]
Length = 184
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 11/109 (10%)
Query: 10 VGLFVVSILFFSFFSIYWLS-------RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
VG ++ + + W + V +++ V L ++ VR
Sbjct: 7 VGAALLVVSTTTMSGCDWKGPNSLPLPGTAGGGPDGYSVTVQL-ADVTTLDRNARVRVGD 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ VGRI + L P + + L + TA + L G ++
Sbjct: 66 VTVGRIADIRL---GPGFAEVTVDPDGEVRLPRNATARVGQSSLLGASH 111
>gi|111021670|ref|YP_704642.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110821200|gb|ABG96484.1| MCE family protein [Rhodococcus jostii RHA1]
Length = 391
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/157 (13%), Positives = 47/157 (29%), Gaps = 11/157 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSV 58
M + V+ + + + L+ N V + GL D+ V
Sbjct: 1 MTDSGGKKKLAALVLVVSLLAIIGV-SLAMFNGTFSETTPVTV--TSDRSGLVMEPDAKV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY-IELS 115
+ G+ VGR+ + + + K + PD + + T I++ + G Y +
Sbjct: 58 KLLGVEVGRVGSIEHVTDG---AELKLAMYPDMMSLIPSNATVEIKSTTVFGAKYVNFVM 114
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + + + A+
Sbjct: 115 PDNPSSTPLQAGDVIASDNVTVEFNTVFQHLSDVLAQ 151
>gi|120405348|ref|YP_955177.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958166|gb|ABM15171.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 376
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 34/304 (11%), Positives = 79/304 (25%), Gaps = 14/304 (4%)
Query: 12 LFVVSILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
V +++ W L + V ++P V + +S VR +
Sbjct: 10 AMVAAVMVTCVAGCEWRGLNSLPLPGTAGGGSGAYTVTAQLPD-VSNIEPNSRVRVGDVT 68
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK--EKK 122
VG +V + H+LA + D L +T A + L G ++EL +
Sbjct: 69 VGNVVKIE---RQGWHALATIKLDGDIELPANTHAAVGQTSLFGTLHVELFSPIDAAPVG 125
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + + T + + I +
Sbjct: 126 RLREGSLIPLSNTRSYPT-TEQTLASLSFLLNGGGIGQMQDITAAFSTALNGREDDLRGF 184
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E + + + D ++ T+ D + + +
Sbjct: 185 NEQVGMFMESLNMQRDDIIAATESLNRLVSRFGERQETLDAALRTIPKALTVLKDQRENM 244
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+E + +++ + + ++ V + + T E
Sbjct: 245 VEALVEFGRLSALTTETLEKSEENLVREVSDLGPVFAALAAAGPSLTRSASLLTTIWPKE 304
Query: 303 NIAD 306
N+
Sbjct: 305 NLTK 308
>gi|327394136|dbj|BAK11558.1| paraquat-inducible protein B YebT [Pantoea ananatis AJ13355]
Length = 881
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 32/92 (34%), Gaps = 9/92 (9%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLD 74
I + W + + I DG+ + +R+ G+ VG + G+ L
Sbjct: 30 IIAMLIAGWLLW----TNFQERGTTITINFQT-ADGIVPGRTPIRYQGVEVGTVQGINLS 84
Query: 75 QEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ KA I+ D L +T + T
Sbjct: 85 -DDYKKIQIKASIKSDMRDALRENTQFWLVTP 115
Score = 44.2 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 13/115 (11%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
LS + V F G+ VG + G L + I + ++ + +
Sbjct: 757 AGSLSLGTPVLFRGVEVGTVTGTSL-GNMADRVQIALRISKKYQHLVRNNSVFWLASGYN 815
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + + + + P + ++ K +
Sbjct: 816 LDFGLIGGVVKTGTFQQFIRGGIQFATPPTVPLAPQATSNKHFLLQDEPPKDWRN 870
Score = 40.3 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 14/34 (41%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
LS +R+ GI VG+I L L +
Sbjct: 643 DASKLSAGMPIRYLGINVGQIESLSLSDDNNQVV 676
>gi|242239506|ref|YP_002987687.1| hypothetical protein Dd703_2078 [Dickeya dadantii Ech703]
gi|242131563|gb|ACS85865.1| Mammalian cell entry related domain protein [Dickeya dadantii
Ech703]
Length = 876
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 31/94 (32%), Gaps = 5/94 (5%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + L + + A + I S DG+ + VR+ G+ +G + +
Sbjct: 23 FWLLPLVALMIAGWLF--YTNQQERGATITIDFF-SADGIVPGRTQVRYQGVEIGTVRDI 79
Query: 72 FLDQE-YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
L ++ +A L T + T
Sbjct: 80 RLSKDLRTISVVANVRSDMKEALRSGTQFWLVTP 113
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 14/114 (12%), Positives = 25/114 (21%), Gaps = 1/114 (0%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLA 107
L + V F GI VG + GL L + R + ++ + +
Sbjct: 755 AGSLQIGTPVLFRGIEVGTVTGLNLGPLSDRVSVALRISKRHAHLVRDNSVFWLASGYNL 814
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P +N K
Sbjct: 815 QFGLTGGVIKSGTFQQFIRGGIAFATPTATPLAPQAQPGRHFLLQNEEPKTWRD 868
Score = 37.6 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
LST +R+ GI +G+I L L +
Sbjct: 641 DASKLSTGMPIRYLGIDIGQIESLKLAPQRDEV 673
>gi|169631670|ref|YP_001705319.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243637|emb|CAM64665.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 379
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/313 (11%), Positives = 84/313 (26%), Gaps = 12/313 (3%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ L ++ D V + GL + V G+PVG I + +
Sbjct: 31 GGYFGLRKAGVVD-DKITVTAQFDE-GSGLFVGNVVEVLGLPVGAIESVE---AKGTYVE 85
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
K + D + + A T + ++ LS E + R P
Sbjct: 86 VKFNVDKDVKVPANVIAAAFTSSVLTDRHVALSPPYTEGPVLKDGDLIPLDRTRT---PV 142
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
G + ++ + + + + + + N E + T L + K +
Sbjct: 143 GFDRVLATVDKLASAMKGDGKGGGPAADLVNIGAQAAAGNGEQVKTALDE----LSKALK 198
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
T + D T + + Q + + V + + +
Sbjct: 199 MTTDGAETKDQLTTIIKSVSSLVNAMNENDKAIRQFGSAVHGTADVLAAERFGTGNTGRK 258
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
++ T + ++ I LL + + ++S + +
Sbjct: 259 ANEVLKSTAELIEKNRDVIKGLLGNSNVTLQSLSDNQRELKETLDLLPLLLDNVDRSIDP 318
Query: 323 DQRQKIISTINTI 335
+ +
Sbjct: 319 VNGSLRLHPMLDK 331
>gi|213584261|ref|ZP_03366087.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
Length = 345
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 7/69 (10%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ SV GL + + F GI +G + +
Sbjct: 276 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDYRI 335
Query: 82 LAKALIRPD 90
I P+
Sbjct: 336 PVLVRIEPE 344
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 21/82 (25%), Gaps = 1/82 (1%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLA 107
LS V F G VG + D + S D + + +
Sbjct: 167 AGQLSPGDPVLFRGYRVGAVETSSFDPQKRTMSYQLFIKAPNDRLVTSNVRFWKDSGIAV 226
Query: 108 GITYIELSTLRKEKKTIFQIAT 129
+T + T+F
Sbjct: 227 DLTSAGMRVEMGSLTTLFGGGV 248
>gi|120405352|ref|YP_955181.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958170|gb|ABM15175.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 470
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 44/136 (32%), Gaps = 10/136 (7%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPN 79
I W + + V + + GL + V+ G+ VGR+ +
Sbjct: 26 IIFICWSLFAGTFRS---YVPVTLTSERSGLVMEPGAKVKLRGVEVGRVGDIR---HGAQ 79
Query: 80 HSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ + I PD + + A +R + G Y++L + E R +
Sbjct: 80 AASLQLQIFPDQISHIPANVEAQVRATTIFGAKYVDLVYPEQPSGQRLAAGAELVSRNVS 139
Query: 138 TATPSGINYFISNAEN 153
+ + + E+
Sbjct: 140 IEVNTVFDNLVHLLEH 155
>gi|120598617|ref|YP_963191.1| hypothetical protein Sputw3181_1801 [Shewanella sp. W3-18-1]
gi|146293304|ref|YP_001183728.1| hypothetical protein Sputcn32_2208 [Shewanella putrefaciens CN-32]
gi|120558710|gb|ABM24637.1| Mammalian cell entry related domain protein [Shewanella sp.
W3-18-1]
gi|145564994|gb|ABP75929.1| Mammalian cell entry related domain protein [Shewanella
putrefaciens CN-32]
Length = 881
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D +
Sbjct: 23 IVALALGAWLG-IKSIKESGIEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDDDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVVMDYRAKPFLNKETLFWLVTP 108
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 16/49 (32%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S + F IPVG +V L A + + ++
Sbjct: 168 LDVGSPIFFRQIPVGSVVSYRLAGNTNVVISAFIQEQYARLVKKNSLFW 216
>gi|114563405|ref|YP_750918.1| hypothetical protein Sfri_2234 [Shewanella frigidimarina NCIMB 400]
gi|114334698|gb|ABI72080.1| Mammalian cell entry related domain protein [Shewanella
frigidimarina NCIMB 400]
Length = 881
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E++I P S G+ + V++ G+ VG++ + +D +
Sbjct: 23 VVALILGAWLG-VKSIKESGIEILIHFP-SATGIDIGKTLVKYQGLTVGKVTDIGIDDDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATI 101
R D L +T +
Sbjct: 81 KGVNVKVIMDYRADPFLNKNTLFWL 105
Score = 36.8 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 36/361 (9%), Positives = 92/361 (25%), Gaps = 14/361 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ S V + PVG IV LD A + + + +
Sbjct: 168 IDVGSPVFYRQAPVGSIVSYRLDGNKQIIISAFVQEQYAHLVNKDSHFWNVS-------- 219
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
K ++ I A I A + + + I + I
Sbjct: 220 -----GLKIDASLAGIKVSTESIASILAGGISFDTGSYTEKAQNGDIYNLYEDELTAIGG 274
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
++ LT + + T + I ++ T + LITS +
Sbjct: 275 VQFSLTASSSEDVNEGTAITYRGIVIGEIEKVTLTDAGVQFIARVEHHYKALITSDSQFW 334
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + ++ + + + T ++ + D L +
Sbjct: 335 ISGAELSLKGVKNVSRLVTGSVINVLPGTQVTEEPMQFELASHAPDLLSQDKLKLTVVAT 394
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
S ++ +SI ++ + I +T +
Sbjct: 395 THSGVSNGAQVRYKQLPIGQITSIGLSKDFSTVEYSIEIQPEFKSLLTKGSFFVPESAIA 454
Query: 352 LMSKINNI-SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ + + + ++ ++ + A + + N + + + +
Sbjct: 455 INASLEGVNVKTRDLTTMLEGAISLIPGNSEMLLSANSTLTLHESVESAQTLYAQQQLTP 514
Query: 411 L 411
Sbjct: 515 F 515
>gi|283478176|emb|CAY74092.1| Uncharacterized protein yebT [Erwinia pyrifoliae DSM 12163]
Length = 877
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + F+ ++ + W Y V I + DG+ + VR+
Sbjct: 17 RRRISPFWLLPFIALLIA---GWLLW----TNYQQRGTTVTIDF-ATADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + G+ + + KA I+ D L +T + T
Sbjct: 69 QGVEVGLVEGISMT-DNLRTIKIKASIKSDMREALRENTQFWLVTP 113
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 26/112 (23%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
LS + V F G+ VG + G L + I + +T + +
Sbjct: 760 LSVGTPVLFRGVEVGTVTGTAL-GTMADRVQITLRISKKYQHLVRNNTVFWLASGYNLKF 818
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ Q + P + E+
Sbjct: 819 GLTGGVVKTGTFQQFIQGGIAFATPPTVPLAPPASSGKHFLLEDEEPGGWRQ 870
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGL 106
+ GL++ S V F IPVGR+ ++ R + + +
Sbjct: 169 DLGGLNSGSLVYFRKIPVGRVYDYSINAGSKGVTVDVLIERRFTHLVRRESRFWNISGIK 228
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
A + + + A + + +Y
Sbjct: 229 ANVGLGGAKVELENLPALVNGAIAFDSPGESPPANTDDDYR 269
>gi|196231160|ref|ZP_03130020.1| Mammalian cell entry related domain protein [Chthoniobacter flavus
Ellin428]
gi|196224990|gb|EDY19500.1| Mammalian cell entry related domain protein [Chthoniobacter flavus
Ellin428]
Length = 340
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/291 (9%), Positives = 84/291 (28%), Gaps = 20/291 (6%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL--------FLDQEYPNHS 81
+ P I + G+ + V G +G++ L + +
Sbjct: 29 GAPGVFVPQHTYRIYF-ENAAGVKPGAPVLLGGRKIGQVRSLFSPVEEKDRPNPKLETMI 87
Query: 82 LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
R ++ + I + G I+ ++ ++ A +RA P
Sbjct: 88 EVTVAAR--ARIFKTVKVEITQPTMLGDAVIDFASGKESSGLAPDGAYFVGERA-----P 140
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
S + +++ + ++++EK + + +
Sbjct: 141 SLSDLP----STVMERLDPVLTKLNGTLDSLEKTSNNLTRLTAEGADLQEAFAEFKQFGV 196
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ +++ + S +++ I L + K+ ++++ + + + +
Sbjct: 197 NLNEISGYDSSLRHSLQNIETLTSDNGKLGQSLNHLAELTGPDGSLSKTFKNTEKFTSEL 256
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
D F+ + +D L+ + + + + R
Sbjct: 257 TAHDDAAVILHNFRAASENLDRALTQIGQQFTTIGGNLEQASDTVKRQPWR 307
>gi|108797259|ref|YP_637456.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866344|ref|YP_936296.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108767678|gb|ABG06400.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692433|gb|ABL89506.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 399
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/280 (9%), Positives = 83/280 (29%), Gaps = 5/280 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + +++ +V L ++S V + + VG + + L H+ + +
Sbjct: 34 LPGTVGTGSGATTYRVQL-ANVGTLESNSPVMVSDVVVGTVGKMTL---RGWHADVEVTV 89
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS-GINY 146
RP+T + + AT+ L G ++ L + + + PS
Sbjct: 90 RPETVIPANAVATVGQTSLLGSMHLALDPPVGKLPSGRLQPGTTLGLDRSSTYPSTEQTL 149
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + I++ + + + + + D + +
Sbjct: 150 SSLSVVVNGGGLGQAGDIIREFNATLNGREDKLRDLLVRLRDFVGMLDTQRDDINASLAA 209
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + + + + ++ + ++ V +T D
Sbjct: 210 LNRLGGTLAGQREVITSALQRIPPALDVLIAERPRLTTALDKLRIFSDSATGLVEDTQAD 269
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + + + + + + + T + + D
Sbjct: 270 LVRNLKNLEPTLKALADVGPNLGTALAYAPTFPYTQGFID 309
>gi|324997545|ref|ZP_08118657.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 440
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 40/383 (10%), Positives = 110/383 (28%), Gaps = 26/383 (6%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS--SVRFNGIPVGRIVGLFLDQEYPNH 80
I R V + G+S + VR GI VG+I ++ +
Sbjct: 16 GIILGNQRFTPPWASRYVVNAAFEAT-PGVSPGNGQEVRVAGIVVGQIAAAQVNPD--GK 72
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
+ + P T +Y + + +R + Y+E++ + +
Sbjct: 73 AELSLSMEPGTQIYDNASLVLRPKSPLNEMYVEIAPGGPPGAPVASGG----------SL 122
Query: 141 PSGINYFISNAENTSKKISDSSRHI-QKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
P + + SR +++ + L + A + A+ +
Sbjct: 123 PVANTKRPIQVDEVLAHLDGESRRGLTQLLAESDVALASAPAELPGGLDATASVTESLAP 182
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ + + + + L + ++ +S Q
Sbjct: 183 VVTELDARRDTLRRLVGALGDISEAVGSNDTRLTGLVDSLRTTLSALSENNAPLDRSLAQ 242
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + +R T Q + ++D L + + E ++ S I
Sbjct: 243 LPDLSDQLRNATSEVQGLADQLDPTLRNVQAA-----AGDLPEALSRLEDTAGQLDSTID 297
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL-----KENNSLFKDAQR 374
+ ++ + + +LN + + + ++ ++ + + F + +
Sbjct: 298 VASPVVREARPVVADLRPYAGDLNAALPPLQRITTDLDPLTGSLTDYLPDIGAFFVNTRE 357
Query: 375 AMHTFRDTSEKINRYIPSIGNNL 397
+ S + + + L
Sbjct: 358 IVSLRDANSGILRGILTANPETL 380
>gi|304409043|ref|ZP_07390664.1| Mammalian cell entry related domain protein [Shewanella baltica
OS183]
gi|307303046|ref|ZP_07582801.1| Mammalian cell entry related domain protein [Shewanella baltica
BA175]
gi|304352864|gb|EFM17261.1| Mammalian cell entry related domain protein [Shewanella baltica
OS183]
gi|306913406|gb|EFN43828.1| Mammalian cell entry related domain protein [Shewanella baltica
BA175]
Length = 879
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 23 IVALALGAWLG-IKSIKESGVEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDEDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVMMDYRAKPFLNKETLFWLVTP 108
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S + F IPVG +V LD A + + ++
Sbjct: 168 LDVGSPIFFRQIPVGSVVSYRLDGNQRVIISAFIQEQYARLVKKNSHFW 216
>gi|239982861|ref|ZP_04705385.1| secreted protein [Streptomyces albus J1074]
gi|291454704|ref|ZP_06594094.1| secreted protein [Streptomyces albus J1074]
gi|291357653|gb|EFE84555.1| secreted protein [Streptomyces albus J1074]
Length = 417
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/289 (10%), Positives = 82/289 (28%), Gaps = 18/289 (6%)
Query: 1 MESKNYYTS----VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS 56
M G+ V + + + ++ V++ + + +
Sbjct: 1 MSENTGAVLRRRSAGIVFVLVPALLVWLAV--AVYDKQFTRSEPVVVETGTVGNEMHLGA 58
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIE- 113
V+ G+ VG + + + + ++P T + A + L G ++
Sbjct: 59 EVKLRGVVVGEVRAIDATGDG---ARLTLAMKPGTLAGVPADVRAQMLPTTLFGERFVAL 115
Query: 114 LSTLRKEKKTIFQIATERNQRA------MITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ + + + A R+ + S +S S+ ++
Sbjct: 116 VPPKQPSGEALAAGAVIAQDRSSSAVELQQVLDNVLPMLTAVQPQKLSATLSAVSQALEG 175
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
E + LTT ++ + L + ++ + V ++ T T +S
Sbjct: 176 RGEKLGDTLTTLDTHLAKFNPHLPALNRDLRHLVEVSHVYADAAPDILTALTDFTTTSST 235
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
+ + + ++ +I R T + E
Sbjct: 236 LAEQEGRLAATYGATTRTAEDLTAFLRQNRSNIIRLSAAGRPTLELLAE 284
>gi|167951059|ref|ZP_02538133.1| hypothetical protein Epers_33622 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 103
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 1/68 (1%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
+ V G+ VG++ + + E + + + L A+I + GL G I++
Sbjct: 4 GAEVEMAGVVVGKVTDIHFNHEDFE-AEVELSLPNSIRLQDDAIASIASSGLLGGKLIKI 62
Query: 115 STLRKEKK 122
S E
Sbjct: 63 SAGGSEDY 70
>gi|15839994|ref|NP_335031.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|13880136|gb|AAK44845.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
Length = 440
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/249 (11%), Positives = 72/249 (28%), Gaps = 5/249 (2%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
+ + G++T V G+ VG + L + L + P + +
Sbjct: 43 TPTYYAQFADT-GGINTGDKVEIAGVNVGLVRSLAIRGN---RVLIGFSL-PGKTIGMQS 97
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A IRT + G +E+ E + ++ +
Sbjct: 98 RAAIRTDTILGRKNLEIEPRGSEPLKPNGFLPLAQTTTPYQIYDAFVDVTKAATGWDIDA 157
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ S + + + L+ + ++ S + I++++ ++
Sbjct: 158 VKRSLNVLSETFDQTAPHLSAALEGVKAFSDTVGRRGEQIEQLLANANRIARVLGDRSEQ 217
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ Q + +L N+ +S N H + + +E+
Sbjct: 218 VNGLLVNAKTLLAAFKQRSQALRILLTNVSEASAQVSGLITDNPNLNHVLAQLRTVSEEL 277
Query: 278 GQKIDHLLS 286
++ + L
Sbjct: 278 VKRKNELAD 286
>gi|319951381|ref|ZP_08025206.1| putative Mce family protein [Dietzia cinnamea P4]
gi|319434978|gb|EFV90273.1| putative Mce family protein [Dietzia cinnamea P4]
Length = 408
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/304 (10%), Positives = 88/304 (28%), Gaps = 16/304 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVG 66
G + L L + + +R GL D+ VR G+ +G
Sbjct: 11 IAGACLAVFLVAVIALSLLL--FGRAFDDRVPLTVRSDR--AGLVMEADAKVRSRGVEIG 66
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGIT-YIELSTLRKEKKT 123
+ + + + + + + P + + +I + + G
Sbjct: 67 NVTDIRQEFDG---ATIEIEVDPAALEAVPSNAVVSIGSNTVFGAKSVDFEPPAVPAPTP 123
Query: 124 IFQIATERNQRAMITATPSGINYFISNA----ENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A R + E + + S + E + + +T
Sbjct: 124 LAAGAVVETSRVTTEVNTLFEDLSDLLLAIEPEKLNATLGAVSGAVDGRGEQVGRTITDL 183
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +E I+ + + K + + + + +A Q +
Sbjct: 184 RSYLEEINPQIETLQRDLAKGSRVANLYADVTPDIMRLLDSGTDVGANVVNNQARFEQLL 243
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + ++ D+++ + D+R +T E + L+ + ++ ++
Sbjct: 244 AASIGTGETGKRLLAENGDELVKALSDLRASTSLLYEYSPMVTCLIVGLNQGVEGAMSAF 303
Query: 300 FLEN 303
++
Sbjct: 304 GGKD 307
>gi|212635613|ref|YP_002312138.1| Mce4/Rv3499c/MTV023.06c protein [Shewanella piezotolerans WP3]
gi|212557097|gb|ACJ29551.1| Mce4/Rv3499c/MTV023.06c protein [Shewanella piezotolerans WP3]
Length = 875
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL EV I P S G+ + V++ G+ VG++V + +D +
Sbjct: 23 IIALALGAWLG-VKSIRESGVEVRIHFP-SATGMDIGKTLVKYQGLTVGKVVDISIDDDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATI 101
R L T +
Sbjct: 81 QGVNVDVLMDYRSSPFLNKDTKFWL 105
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 11/66 (16%), Positives = 22/66 (33%), Gaps = 6/66 (9%)
Query: 32 NQYDGPMAEVI-----IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
D P + I ++ ++ +++ F GI VG++ L + A
Sbjct: 730 GLIDKPFYNLDNALTFIITNNNLGSINKGTAIFFRGIKVGQVDSYQLIADGTG-VEMTAH 788
Query: 87 IRPDTP 92
I
Sbjct: 789 IESRYK 794
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ + P SV L+ + +R+ G VG + + L ++
Sbjct: 626 SQSTAITMTFPASVK-LAKKAPIRYLGHKVGEVESVVLSKD 665
>gi|30468093|ref|NP_848980.1| ORF193 [Cyanidioschyzon merolae strain 10D]
gi|30409193|dbj|BAC76142.1| ycf22 [Cyanidioschyzon merolae strain 10D]
Length = 193
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/76 (18%), Positives = 26/76 (34%), Gaps = 9/76 (11%)
Query: 1 MESKNYY---TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPG-SVDGLSTDS 56
M + Y T +G ++ + WL I G+ +
Sbjct: 1 MRTSKRYEFETYLGWIMLFGIGLIISFATWL-----IAPSSKTYCIYFQLIDATGVKKGT 55
Query: 57 SVRFNGIPVGRIVGLF 72
+V++ G PVG +V +
Sbjct: 56 AVKYRGTPVGEVVAVK 71
>gi|319426604|gb|ADV54678.1| Mammalian cell entry related domain protein [Shewanella
putrefaciens 200]
Length = 881
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D +
Sbjct: 23 IVALALGAWLG-IKSIKESGIEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDDDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVVMDYRAKPFLNKETLFWLVTP 108
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 16/49 (32%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S + F IPVG +V L A + + ++
Sbjct: 168 LDVGSPIFFRQIPVGSVVSYRLAGNTNVVISAFIQEQYARLVKKNSLFW 216
>gi|126436738|ref|YP_001072429.1| Fis family transcriptional regulator [Mycobacterium sp. JLS]
gi|126236538|gb|ABN99938.1| transcriptional regulator, Fis family [Mycobacterium sp. JLS]
Length = 380
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 39/279 (13%), Positives = 83/279 (29%), Gaps = 11/279 (3%)
Query: 10 VGLFVVSILFFSFFS------IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
V +FV++ + S + L + V ++P VD + +S VR +
Sbjct: 12 VTVFVMAAVVLSGCADWRGANSLPLPGTEGGGDGAYTVQAQLPD-VDNIERNSRVRVGDV 70
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG + + ++L I D L + TAT+ L G +IEL++
Sbjct: 71 TVGNVTKIE---RQGWNALVTMAIDKDVDLPANATATVGQTSLLGSLHIELASPTAVPPE 127
Query: 124 IFQIATERNQRAMITATPS-GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ PS + I Q + +
Sbjct: 128 GRLRDGSLIPLSSGGRYPSTEQTLAAVSLILNGGGIGQIHDITQALSTAFRGREEDLRSL 187
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
I + T + D ++ T+ + D A+ + +
Sbjct: 188 ISQLDTFIRYTNEQTDDIIAATESLNDLVGQFADQKPVIDNALKTIPDALAVVRDQRQTL 247
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + ++D V + ++ + + V + +
Sbjct: 248 ADALDRLGQFSALAADSVNQSKENLVKELKDLGPVLESL 286
>gi|296163932|ref|ZP_06846568.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295900713|gb|EFG80083.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 346
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 80/277 (28%), Gaps = 4/277 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + +++P ++ L+ +S VR + VGR+ + L + +
Sbjct: 3 LPGGPGSESGSYTIYVQMPETLA-LNANSRVRVADVFVGRVRAIGL---KNWIATLTLDL 58
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
L + TA I L G ++EL++ + + + +
Sbjct: 59 EKGVKLPKNATAKIGQTSLLGSQHVELASPANPSPQLLKNGDIIPLQNASAYPTTERVLA 118
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
A I + ++ + ++ + T A D + T
Sbjct: 119 SFAAVLRGGGIPNVEVIASEVRNMLTGRADQIHDFLKKLDTFTARLNEQRDDITRAIDST 178
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ D + + + ++ L+ + + D+
Sbjct: 179 DRLLTYVAKQSDTLDHVLTEFPPLAKHFAEQRQPFLDATNALGRFSDVLNQTLTAARPDL 238
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ + Q +++ D +K T F +
Sbjct: 239 DKDVRQLQRPLKQLSRASMDLVETLKIALTLPFSADA 275
>gi|229588227|ref|YP_002870346.1| putative paraquat-inducible protein [Pseudomonas fluorescens SBW25]
gi|229360093|emb|CAY46947.1| putative paraquat-inducible protein [Pseudomonas fluorescens SBW25]
Length = 767
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
++V+ ++ WL Y ++ +R S +G+ + + V + G+PVG++
Sbjct: 18 IWVLPLIALIIGG--WLG-WRAYSQQGIDIQVRF-ESGEGIQVNKTEVVYKGMPVGKVKA 73
Query: 71 LFLDQEYPNH-SLAKALIRPDTP--LYPSTTATI 101
L LD E N +A + D L +T +
Sbjct: 74 LALDDEGNNRGVIATIEMNKDVEQYLKTNTRFWL 107
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 5/81 (6%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
+ L ++ DG+ + VRF G+ VG+I + L + +
Sbjct: 506 FRLFADRDAANQHGTLVTIKVDRADGMRPGTPVRFKGLDVGKIESVDLSADMQSVV---- 561
Query: 86 LIRPDTPLYPSTTATIRTQGL 106
+ A + +Q
Sbjct: 562 -LSARITQVADRIARVGSQFW 581
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 7/62 (11%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + ++ + + + ST
Sbjct: 400 VLFTDNLGSLDVGSPVLYKQVKVGSVQSYQFSRKNKQLVIGVHIEKEYENLVNGSTRFWN 459
Query: 102 RT 103
+
Sbjct: 460 AS 461
Score = 37.2 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 12/134 (8%), Positives = 30/134 (22%), Gaps = 1/134 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + I VG++ L ++ + + T +
Sbjct: 170 LNRGSPVFYKQIQVGQVKSYLLSEDQSTVEIKVYIEPTYASLVRKHTRFWNASGISIDAN 229
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
L + +I +P + + ++ +
Sbjct: 230 LSGLKVRSESLSSIVAGGIAFATPENRKDSPPTDPSLPFRLYEDFDAAAAGIKVKVQLAD 289
Query: 171 NIEKPLTTTIANIE 184
T +
Sbjct: 290 FEGLQAGRTPVMYK 303
>gi|254818328|ref|ZP_05223329.1| virulence factor Mce family protein, putative [Mycobacterium
intracellulare ATCC 13950]
Length = 384
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/255 (8%), Positives = 72/255 (28%), Gaps = 5/255 (1%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
V + GL + D+ V+ G+ VG++ +
Sbjct: 16 GLFRGSFTETVPVTVISQR--AGLVMNPDAKVKMRGVQVGKVASIDPLPNGQAAIHLAMD 73
Query: 87 IRPDTPLYPSTTATIRTQGLAGIT-YIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + G + + + + + T + Q M+
Sbjct: 74 PSQLHFIPGNVLVDIASSTVFGAKSILLVEPAQPSAQRLHSGQTLQGQHVMVEINTVFQQ 133
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ K+++S + + L +++++++ L ++ +
Sbjct: 134 LVSVLSHIDPPKLNESLGALAQAFSGRGPQLGQSLSDLDSFLARLEPSLPAFRHDLAVLP 193
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
V ++ T + + + ++ +L + ++ +
Sbjct: 194 VVSNAYADAAPDLMKTASNATRISKTIVDEQRNLDALLISAIGLADIGNDVLSTNRQPLT 253
Query: 266 DVRETTQTFQEVGQK 280
DV ++ +
Sbjct: 254 DVVHLLAPTTDLTNE 268
>gi|116328039|ref|YP_797759.1| substrate binding protein of an ABC transporter complex [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116331508|ref|YP_801226.1| substrate binding protein of an ABC transporter complex [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|116120783|gb|ABJ78826.1| Substrate binding protein of an ABC transporter complex [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116125197|gb|ABJ76468.1| Substrate binding protein of an ABC transporter complex [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 249
Score = 51.5 bits (120), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/125 (17%), Positives = 38/125 (30%), Gaps = 15/125 (12%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
Y VG V+ + S + + E + + +G+ + V G+P
Sbjct: 5 RYLLVG--VIFTVAISVVGYFTIITEGGPVKKRGEFMKVTFRNAEGIKIGNKVTVQGVPF 62
Query: 66 GRIVGLFLDQEYPNHSLA-------------KALIRPDTPLYPSTTATIRTQGLAGITYI 112
G I + L Q N L+R LY + I+ + L I
Sbjct: 63 GYISAIRLIQIDENGVEVSAGETGIGTRVEITMLLREKIQLYDNYDIIIKNESLLTGRVI 122
Query: 113 ELSTL 117
+
Sbjct: 123 SIDPG 127
>gi|254429001|ref|ZP_05042708.1| mce related protein [Alcanivorax sp. DG881]
gi|196195170|gb|EDX90129.1| mce related protein [Alcanivorax sp. DG881]
Length = 280
Score = 51.1 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/78 (17%), Positives = 30/78 (38%), Gaps = 7/78 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ L + + +Y +Q ++ I + G+ +R+ G+PVG + + L
Sbjct: 20 LVSLLVAGWLLY-----DQLLQRDVQIEITF-ENGSGIKPGVDLRYRGVPVGSVDEIVLS 73
Query: 75 QEYPNHSLAKALIRPDTP 92
+ H A + D
Sbjct: 74 -DDLKHVTVHASLNRDAE 90
>gi|254776983|ref|ZP_05218499.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 404
Score = 51.1 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKAL 86
+ P ++ + GL T S V +NG+ +GR+ + ++++ +
Sbjct: 35 QFRGDFTPKTKLTMVATR--AGLVMETGSKVTYNGVAIGRVADISEIERDGAPAAKLVLD 92
Query: 87 IRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + ATI L G Y
Sbjct: 93 VDPRYVNLIPANVVATIEAATLFGNKY 119
>gi|330811747|ref|YP_004356209.1| Putative paraquat-inducible protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379855|gb|AEA71205.1| Putative paraquat-inducible protein [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 767
Score = 51.1 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
++V+ ++ WL Y+ E+ +R S +G+ + + V + G+ VG++
Sbjct: 18 IWVLPLIALIIGG--WLG-WRAYNETGIEINVRF-ESGEGIQVNKTEVVYKGMTVGKVTA 73
Query: 71 LFLDQEYPNH-SLAKALIRPDTP--LYPSTTATI 101
L LD E + +A + D L T +
Sbjct: 74 LTLDDEGSSKGVVATIEMNKDVEQYLKTGTRFWL 107
Score = 43.0 bits (98), Expect = 0.091, Method: Composition-based stats.
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 6/80 (7%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
+ EV I++ DGL + + +RF G+ VG+I + L + + L A
Sbjct: 508 LFADHEAAQQRGTEVTIKVDR-ADGLRSGTPIRFKGLDVGKIEDVDLSADMQS-VLLTAR 565
Query: 87 IRPDTPLYPSTTATIRTQGL 106
I T + A + +Q
Sbjct: 566 I---TEVPE-RIARVGSQFW 581
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 22/117 (18%), Positives = 37/117 (31%), Gaps = 8/117 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ-GLAG 108
L V + I VG++ G L + + L LI P + T + GL
Sbjct: 647 LKIGVPVTYREITVGKVTGYEL-GQTADRVLIHILIEPKYAPLVRSGTRFWNSSGFGLDF 705
Query: 109 ITYIELSTLRKEKKTIFQI----ATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + +T+ Q AT +R A P E+ +
Sbjct: 706 GLFKGATVRTESLETLIQGGIAFATPDGERMGNPARPEQTFPLFDKFEDEWLTWAPK 762
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 6/62 (9%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + ++ L S + + + VG + ++ + + + ST
Sbjct: 400 VLLTENLGSLEVGSPILYKQVKVGSVQSYQFSRKKKQLIIGVHIEKEYEGLVNGSTRFWN 459
Query: 102 RT 103
+
Sbjct: 460 AS 461
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L+ S V + I VG++ +L E + K I P
Sbjct: 170 LNRGSPVFYKQIQVGQVKS-YLLSEDQSKVEIKIFIEPTY 208
>gi|324997541|ref|ZP_08118653.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 397
Score = 51.1 bits (119), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/281 (9%), Positives = 78/281 (27%), Gaps = 14/281 (4%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
++ L + V +P +V+ + S+ NG GR+ + ++
Sbjct: 2 LVVGAVVALGGTGP-----YRVHAVLPSAVN-IVEGGSLLVNGFEAGRVSSIDVE---DG 52
Query: 80 HSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ + PL+ T TI + + ++++ + A T
Sbjct: 53 QARVTMDLDRAYAPLHDGATVTIGWKAVLSERSVQITDGNASAPELPDGAMLTGSMPKAT 112
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT----IANIETISTVLANNI 194
+ + + + + + E T ++ + + + +
Sbjct: 113 EVDDVLAALDAPTRDRLRSLVGNLDGALTGNEQNLNATLRTSGPAVSALGQVLQAVGTDG 172
Query: 195 SHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFV 254
I ++ + ++ A +V L + + +
Sbjct: 173 PAIRNLVTRLNSMMGTVAERDQQVRTVIDEVGRFSSEAAARRDQVRDTLGQLPPTLDRAK 232
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ D V V + + +K+ + + ++
Sbjct: 233 STLDLVPGVVDEAVPLLDGLRPATEKLGPVARNLRPLLQDL 273
>gi|118465139|ref|YP_883682.1| virulence factor Mce [Mycobacterium avium 104]
gi|118166426|gb|ABK67323.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 404
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 34/87 (39%), Gaps = 7/87 (8%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKAL 86
+ P ++ + GL T S V +NG+ +GR+ + ++++ +
Sbjct: 35 QFRGDFTPKTKLTMVATR--AGLVMETGSKVTYNGVAIGRVADISEIERDGAPAAKLVLD 92
Query: 87 IRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + ATI L G Y
Sbjct: 93 VDPRYVNLIPANVVATIEAATLFGNKY 119
>gi|118464340|ref|YP_879941.1| virulence factor Mce [Mycobacterium avium 104]
gi|118165627|gb|ABK66524.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 381
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/371 (9%), Positives = 112/371 (30%), Gaps = 6/371 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + G +++ F + + + + + + +P L +S V
Sbjct: 1 MWLRAGGLATGSMLLAGCQFGGLNSLAMPGTAGHGSGAYSITVELPDVAT-LPQNSPVMV 59
Query: 61 NGIPVGRIVGLFLDQ--EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ + VG + G+ +Q + ++ K + + L ++TAT+ L G +I+L+ +
Sbjct: 60 DDVTVGSVAGISAEQRSDGSFYAAVKLALDKNVVLPANSTATVAQTSLLGSMHIDLNRPK 119
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFIS-NAENTSKKISDSSRHIQKIIENIEKPLT 177
+ A P+ + + + +
Sbjct: 120 DRPAVGRLTDGSKIAEANTGRYPTTEEVLSALGVVVNKGNVGALEEITDETYRAVAGRQD 179
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ + ++ + + ++ ++ S S + +
Sbjct: 180 QFVDLVPRLAELTSGLNRQVNDIIDAVDGLNRFSASLARDKDNLGRALDTLPEAIRVLNK 239
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ I+E +S + T D + + ++ +F + ++ T
Sbjct: 240 NRDHIVEAFSALHKLADVTSHILAKTKVDFAADLKDLYAAVKALNDNRRNFVTSLQLLLT 299
Query: 298 SAFLENI--ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
F + + + + + T + +++N+ L+ +
Sbjct: 300 FPFPNFGIKQAVRGDYLNVFTTFDLTLRRLGETFFTTAYFDPNMAHMNEILNPPDFLVGE 359
Query: 356 INNISALKENN 366
+ N+S +
Sbjct: 360 MANLSGQAADP 370
>gi|117920219|ref|YP_869411.1| hypothetical protein Shewana3_1772 [Shewanella sp. ANA-3]
gi|117612551|gb|ABK48005.1| Mammalian cell entry related domain protein [Shewanella sp. ANA-3]
Length = 878
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 23 IVALALGAWLG-IKSIKESGIEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDEDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVMMDYRAKPFLNKETLFWLVTP 108
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S V F IPVG +V LD A + + ++
Sbjct: 168 LDVGSPVFFRQIPVGSVVSYRLDGNARVIISAFIQEQYARLVKKNSHFW 216
>gi|41410182|ref|NP_963018.1| Mce2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41399016|gb|AAS06634.1| Mce2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 380
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 50 DGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
GL T S V +NG+ +GR+ + ++++ + + P + + ATI
Sbjct: 29 AGLVMETGSKVTYNGVAIGRVADISEIERDGAPAAKLVLDVDPRYVNLIPANVVATIEAA 88
Query: 105 GLAGITY 111
L G Y
Sbjct: 89 TLFGNKY 95
>gi|330431228|gb|AEC16287.1| paraquat-inducible protein B [Gallibacterium anatis UMN179]
Length = 885
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 32/113 (28%), Gaps = 3/113 (2%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTAT 100
+ + LS + V + G+ VG I + L+ + + ++
Sbjct: 757 VLETENAASLSVGAPVLYRGVEVGAISNIKLNTTADR-VFVDIQLAQQYRHLVRQNSEFW 815
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ + I + + + + + + + P Y +
Sbjct: 816 LASGYSLDIGWSGVDFQTGTAQQLLRGGIGFSTPSGKVVQPVAKAYQHFLLQT 868
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 18/109 (16%), Positives = 36/109 (33%), Gaps = 8/109 (7%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL-STDSSV 58
M +K + F + I + +Q G + GL + + +
Sbjct: 12 MSAKISAIKRISPFWLLPFIAFCVGIVLFYQIHQEQGEKITI---FFSDGSGLIAEKTPI 68
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQG 105
R+ G+ +G + + Q+ + +A I P+ L T I
Sbjct: 69 RYQGLQIGLVKKVNFTQDMKS-VKVEANIYPEAVSVLREDTKFWIVQPS 116
Score = 44.5 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + D L+T +R+ G+ VG I + LD+ + +A A I+ D
Sbjct: 641 YEITLFADNADNLTTGMPLRYLGLEVGTIQKISLDK-HKQRVVALASIQRDY 691
>gi|326383097|ref|ZP_08204786.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198233|gb|EGD55418.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 394
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/355 (8%), Positives = 93/355 (26%), Gaps = 15/355 (4%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVR 59
++ + +V L + + V + P GL + D+ V+
Sbjct: 12 RTRKLAALI---MVGALVGIVALA--SGQFLGWFSSTKTVTLFAPR--AGLVMNPDAKVK 64
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLR 118
G+ VGR+ + + + + A I++ + G + +
Sbjct: 65 LRGVEVGRVASVTSVGDR-AELKLDMAADQIDLVPANVYADIKSNTIFGAKAVNLVVPAS 123
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + + R ++ AE K++ + + + + K +
Sbjct: 124 GPQGQLSAGSVIRADHVVVELNTVYQQLVNVLAELQPDKLNVTIGAVDEALSGRGKAIGD 183
Query: 179 TIANIETISTVLANNISHIDKMMHT----TQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
++ + I ++ +++++ T V + ++ + +
Sbjct: 184 SLVQLTDILGKTNPHLPELNRLLREGAGATNVYADAMPDLMRVVDNATVVGNTLVDNASN 243
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + + S +I+T+ D+ T+ + ++ S
Sbjct: 244 LDALLINVTGMTNTVNGVLTASKKNLISTLTDLNPVTRLLGRQAPGLRCFITAASDATDI 303
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
N ++ S +
Sbjct: 304 ATPLLGGRNGMLLLDAGLIPGQDPYRYPQDLPEVRGDGPPTCQAGLTDVQSKEHV 358
>gi|110835266|ref|YP_694125.1| PqiB family protein [Alcanivorax borkumensis SK2]
gi|110648377|emb|CAL17853.1| PqiB family protein [Alcanivorax borkumensis SK2]
Length = 297
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ L + + +Y +Q ++ I + G+ +R+ G+PVG + + L
Sbjct: 37 LVSLLVAGWLLY-----DQLLQRDVQIEITF-DNGAGIKPGVDLRYRGVPVGSVDKIVLS 90
Query: 75 QEYPNHSLAKALIRPDTP 92
+ NH A + D
Sbjct: 91 -DDLNHVTVHASLNRDAE 107
>gi|114047242|ref|YP_737792.1| hypothetical protein Shewmr7_1742 [Shewanella sp. MR-7]
gi|113888684|gb|ABI42735.1| Mammalian cell entry related domain protein [Shewanella sp. MR-7]
Length = 878
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 23 IVALALGAWLG-IKSIKESGIEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDEDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVMMDYRAKPFLNKETLFWLVTP 108
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S V F IPVG +V LD A + + ++
Sbjct: 168 LDVGSPVFFRQIPVGSVVSYRLDGNARVIISAFIQEQYARLVKKNSHFW 216
>gi|24374148|ref|NP_718191.1| PqiB family protein [Shewanella oneidensis MR-1]
gi|24348651|gb|AAN55635.1|AE015702_5 PqiB family protein [Shewanella oneidensis MR-1]
Length = 869
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 29/88 (32%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D +
Sbjct: 14 IVALALGAWLG-IKSIKESGVEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDDDL 71
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 72 KGVNVKVMMDYRAKPFLNKETLFWLVTP 99
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S V F IPVG +V LD A + + ++
Sbjct: 159 LDVGSPVFFRQIPVGSVVSYRLDGNARVIISAFIQEQYARLVKKNSHFW 207
>gi|118470959|ref|YP_889043.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118172246|gb|ABK73142.1| virulence factor mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 466
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/313 (10%), Positives = 89/313 (28%), Gaps = 11/313 (3%)
Query: 1 MESKNY-YTSVGLFVVSILFF---SFFSIYWLSRSNQYDGPMAEVIIRIP-GSVDGLSTD 55
M + +V L +F + L V+ + +V L +
Sbjct: 1 MRIRKRIRLAVAAGTCVALTASGCAFQGVNSLPLPGAEGRGADSVVYHVEIANVATLEPN 60
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY--IE 113
S V N + VG + L + H+ + + P + + ATI L G + +
Sbjct: 61 SPVMMNDVVVGSVRRLAV---RDWHADVEFSVEPGVVVPANAVATIGQTSLLGSMHLALN 117
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
++ + + T A T + A + I ++
Sbjct: 118 PPLGQEPQGRLTPGGTIPLNSASTYPT-TEQTLSSLAAVVNGGGLGQIGEVIHNFSVALD 176
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + + + D ++ + + + + +
Sbjct: 177 GREADFRDLLTRLDNFVGTLDAQRDNIVSSIDSLNRLASTFAGQSEEITRALNKIPPAMD 236
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
+ +Q+ + +Q + V + D+ + + + + + D + ++
Sbjct: 237 VLIQERPRFTTALQKLGTFGSTAHQLVNESQDDLVRNLRNLEPAIKALADVGPDLAGVLE 296
Query: 294 SKETSAFLENIAD 306
F ++ D
Sbjct: 297 YAGHFPFTQSFID 309
>gi|41406666|ref|NP_959502.1| LprN [Mycobacterium avium subsp. paratuberculosis K-10]
gi|254773617|ref|ZP_05215133.1| LprN [Mycobacterium avium subsp. avium ATCC 25291]
gi|41395015|gb|AAS02885.1| LprN [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 384
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 37/371 (9%), Positives = 112/371 (30%), Gaps = 6/371 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + G +++ F + + + + + + +P L +S V
Sbjct: 4 MWLRAGGLATGSMLLAGCQFGGLNSLAMPGTAGHGSGAYSITVELPDVAT-LPQNSPVMV 62
Query: 61 NGIPVGRIVGLFLDQ--EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ + VG + G+ +Q + ++ K + + L ++TAT+ L G +I+L+ +
Sbjct: 63 DDVTVGSVAGISAEQRSDGSFYAAVKLALDKNVVLPANSTATVAQTSLLGSMHIDLNRPK 122
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFIS-NAENTSKKISDSSRHIQKIIENIEKPLT 177
+ A P+ + + + +
Sbjct: 123 DRPAVGRLTDGSKIAEANTGRYPTTEEVLSALGVVVNKGNVGALEEITDETYRAVAGRQD 182
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ + ++ + + ++ ++ S S + +
Sbjct: 183 QFVDLVPRLAELTSGLNRQVNDIIDAVDGLNRFSASLARDKDNLGRALDTLPEAIRVLNK 242
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ I+E +S + T D + + ++ +F + ++ T
Sbjct: 243 NRDHIVEAFSALHKLADVTSHILAKTKVDFAADLKDLYAAVKALNDNRRNFVTSLQLLLT 302
Query: 298 SAFLENI--ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
F + + + + + T + +++N+ L+ +
Sbjct: 303 FPFPNFGIKQAVRGDYLNVFTTFDLTLRRLGETFFTTAYFDPNMAHMNEILNPPDFLVGE 362
Query: 356 INNISALKENN 366
+ N+S +
Sbjct: 363 MANLSGQAADP 373
>gi|113970007|ref|YP_733800.1| hypothetical protein Shewmr4_1667 [Shewanella sp. MR-4]
gi|113884691|gb|ABI38743.1| Mammalian cell entry related domain protein [Shewanella sp. MR-4]
Length = 878
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 30/88 (34%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 23 IVALALGAWLG-IKSIKESGIEIQIHFP-SATGIDVGKTLVKYQGLTVGKVKDIGIDEDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
R L T + T
Sbjct: 81 KGVNVKVMMDYRAKPFLNKETLFWLVTP 108
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 17/49 (34%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
L S V F IPVG +V LD A + + ++
Sbjct: 168 LDVGSPVFFRQIPVGSVVSYRLDGNARVIISAFIQEQYARLVKKNSHFW 216
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 13/108 (12%), Positives = 43/108 (39%), Gaps = 4/108 (3%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
S + ++ I ++ GL+ + VR+ +P+G+++ + L ++ +
Sbjct: 373 FALQESAPDLLKAKKRQLTITSTENM-GLTAGAEVRYKQLPIGQVLAVKLTKD-LSAVEY 430
Query: 84 KALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ ++P+ + + + + +S ++ T+ + A
Sbjct: 431 QLELQPEFASLVRSDSYFIPESALSIDASLDGVSVKTRDMATLTKGAV 478
>gi|261345911|ref|ZP_05973555.1| mce protein [Providencia rustigianii DSM 4541]
gi|282565995|gb|EFB71530.1| mce protein [Providencia rustigianii DSM 4541]
Length = 779
Score = 51.1 bits (119), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/101 (16%), Positives = 36/101 (35%), Gaps = 7/101 (6%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPV 65
+ F + + + + L Q+ E+ I+ S G+ + +R+ G+ V
Sbjct: 22 RVRISPFWLLPIIAILIAGWLL--FQQWVERGTEITIQFS-SASGVVAGRTPIRYQGVEV 78
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G + + + + + A I D L T + T
Sbjct: 79 GMVQTVTIS-DDMKSIIVTARINKDMRSALTTGTRFWLITP 118
Score = 39.9 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 13/122 (10%), Positives = 30/122 (24%), Gaps = 4/122 (3%)
Query: 41 VIIRIPGS-VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RPDTPLYPST 97
+ I + S + + + F G+ +G + GL+L E + I + +T
Sbjct: 649 LTIFLDASEAGSIQVGTPILFRGLEIGTVTGLYL-GELSDRVYVATRIGKEYQYLIRDNT 707
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ + K + + P +
Sbjct: 708 QFWLSSGYNLAFGLTGGVVKSGTFKQFVRGGISLATPPTVPLAPRAKADQHFILKLEPPA 767
Query: 158 IS 159
Sbjct: 768 DW 769
Score = 38.8 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 16/39 (41%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+I LS +R+ GI +G+I L L +
Sbjct: 537 VILTTFDASKLSEGMPIRYLGINIGQIESLKLSADNREV 575
>gi|254776557|ref|ZP_05218073.1| Mce1_2 [Mycobacterium avium subsp. avium ATCC 25291]
Length = 92
Score = 50.7 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 6/68 (8%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIP 64
Y GL ++ + + IY + P + + S GL S V +NG+
Sbjct: 15 YKLAGLAILVVGALALALIY--GQFRGNFTPKTSLTML--ASRAGLVMDPGSKVTYNGVE 70
Query: 65 VGRIVGLF 72
+GR+ +
Sbjct: 71 IGRVGTIS 78
>gi|170726480|ref|YP_001760506.1| hypothetical protein Swoo_2127 [Shewanella woodyi ATCC 51908]
gi|169811827|gb|ACA86411.1| Mammalian cell entry related domain protein [Shewanella woodyi ATCC
51908]
Length = 874
Score = 50.7 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 31/88 (35%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL EV I P S G+ + VR+ G+ VG++V + +D E
Sbjct: 23 LVALALGAWLG-VKSIKEAGIEVRIHFP-SATGIDVGKTLVRYQGLTVGKVVDISIDDEL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
K R D L T +
Sbjct: 81 KGVNVDLKMDYRADPFLNKGTKFWLVAP 108
Score = 36.8 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
+ + P V LS + +R++G VG + + LD+
Sbjct: 627 QAKPISLSFPADVK-LSAKAPIRYHGHQVGEVESVKLDK 664
>gi|57116756|ref|YP_177740.1| MCE-family protein MCE2A [Mycobacterium tuberculosis H37Rv]
gi|148660358|ref|YP_001281881.1| MCE-family protein Mce2A [Mycobacterium tuberculosis H37Ra]
gi|308378678|ref|ZP_07668798.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu010]
gi|308395899|ref|ZP_07669351.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu012]
gi|38490208|emb|CAE55301.1| MCE-FAMILY PROTEIN MCE2A [Mycobacterium tuberculosis H37Rv]
gi|148504510|gb|ABQ72319.1| MCE-family protein Mce2A [Mycobacterium tuberculosis H37Ra]
gi|308359589|gb|EFP48440.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu010]
gi|308367198|gb|EFP56049.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu012]
Length = 404
Score = 50.7 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + GL S V +NG+ +GR+ + ++++ +
Sbjct: 34 KQFRGEFTPKTELTMVAFR--AGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVL 91
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 92 DVNPRYISLIPVNVVADIEAATLFGNKY 119
>gi|294140614|ref|YP_003556592.1| PqiB family protein [Shewanella violacea DSS12]
gi|293327083|dbj|BAJ01814.1| PqiB family protein [Shewanella violacea DSS12]
Length = 875
Score = 50.7 bits (118), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 4/88 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL EV I P S G+ + VR+ G+ VG++V + +D +
Sbjct: 23 LVAIALGSWLG-IKSIREAGIEVRIHFP-SATGIDVGKTLVRYQGLTVGKVVDISIDDDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATIRTQ 104
K R D L T + T
Sbjct: 81 QGVNVDLKMDYRADPFLNEQTKFWLVTP 108
>gi|146283570|ref|YP_001173723.1| PqiB family protein [Pseudomonas stutzeri A1501]
gi|145571775|gb|ABP80881.1| PqiB family protein [Pseudomonas stutzeri A1501]
Length = 769
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/358 (8%), Positives = 94/358 (26%), Gaps = 11/358 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGI 63
+ ++++ + + L + + Y + + S +G+ +SV + G+
Sbjct: 13 SSWSAIWILPLIALAIGAWLAW-----EAYSERGIYIEVVF-ESAEGIEIGKTSVLYKGM 66
Query: 64 PVGRIVGLFLDQEYPNHSLA---KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G + L L + + + D+ L T + + L TL
Sbjct: 67 TIGVVRDLRLGDDERRQVVVAEIEMNKDVDSYLRSGTRFWLVRPSVTLAGITGLETLVSG 126
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
A + R + T + + K + + +
Sbjct: 127 NYIGISPADGEDTRRFVALTEEPPMSDSRIGLHLTLKADRLGSLNRGSPVFYRQIQVGQV 186
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N + + + V H+ + T+ +T + +++
Sbjct: 187 KNFVLAEDDSTVEVQLYIQPEYAHLVRKHTRFWNASGVTVDAGLTGVKFRTESLASIVAG 246
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I + + + +++ + Q + + + +
Sbjct: 247 GIAFATPAHRKDSPATDPSIPFRLYEDFDAAQAGIKTLVALQD-FDGLQAGRTTVIYKGM 305
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ A E++ ++ + + S + L + +
Sbjct: 306 QVGLLKKLDIDSDLSGAQAELSIDPLFEDYLVDDTQFWVVKPSVSVAGISGLEALVRG 363
Score = 43.8 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 6/62 (9%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + ++ + + S+
Sbjct: 400 VLTADNLGSLDVGSPVLYRQVRVGSVQSYQFSRDQQRVVVGVHIEQPYADLVNSSSRFWN 459
Query: 102 RT 103
+
Sbjct: 460 AS 461
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 22/62 (35%), Gaps = 1/62 (1%)
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAG 108
DGL + +R+ G+ VG + + L + + A+ T + L
Sbjct: 529 DGLGAGTPIRYKGLEVGEVDSVTLSDDLGHVVLRARITAAESRIARAGTQFWVVRPELGL 588
Query: 109 IT 110
+
Sbjct: 589 MR 590
>gi|118464721|ref|YP_879937.1| virulence factor Mce [Mycobacterium avium 104]
gi|118166008|gb|ABK66905.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 384
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/111 (16%), Positives = 42/111 (37%), Gaps = 10/111 (9%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL 71
+++ L +F + +LS + + P+ V + P GL + V++ GI +G++ +
Sbjct: 1 MLAGLMVAFAVLTYLSYTAAF-APIDTVTVSAPR--AGLVMEQGAKVKYRGIQIGKVEAI 57
Query: 72 FLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ + I + + T I + G +E +
Sbjct: 58 EYSGD---QARLTLGINSKDMHFIPSNATVHIAGNTIFGAKAVEFIPPQTP 105
>gi|167969012|ref|ZP_02551289.1| MCE-family protein Mce2A [Mycobacterium tuberculosis H37Ra]
gi|306774693|ref|ZP_07413030.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu001]
gi|307078520|ref|ZP_07487690.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu011]
gi|308216592|gb|EFO75991.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu001]
gi|308363517|gb|EFP52368.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu011]
Length = 389
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 32/88 (36%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + GL S V +NG+ +GR+ + ++++ +
Sbjct: 19 KQFRGEFTPKTELTMVAFR--AGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVL 76
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 77 DVNPRYISLIPVNVVADIEAATLFGNKY 104
>gi|330880337|gb|EGH14486.1| PqiB family protein [Pseudomonas syringae pv. glycinea str. race 4]
Length = 394
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/360 (6%), Positives = 74/360 (20%), Gaps = 27/360 (7%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQ 104
+ L S + + I VG++VG L ++ D + T +
Sbjct: 56 TDDLGSLDIGSPIYYRRIQVGQVVGYELSKDGRGVDIQIFINAPNDQYITTDTRFWNASG 115
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + + +I + +
Sbjct: 116 VDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKLADENAEFKI------------- 162
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ ++ + V + +
Sbjct: 163 -----------FDDQATALAPPDGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVD 211
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
D K I ++ + ++ + F G +
Sbjct: 212 LDYDPATKTFPGIVGAVIYPKRLGAAESKLQELGGKGDEEEQSARVLGAFVANGLRAQVR 271
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL-N 343
+ + + + + + + +E ++ +
Sbjct: 272 NGNLLTGQLYIAMEFDPKAPKVAFNAKARPLEIPTVPGSFDKLQEQLQAFVEKLSKLPID 331
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+ ++ +S++ +S+ + + T N Q Q+
Sbjct: 332 ELAKNLNGSLSELQKTLKQVN-SSVLPQMRGTLQQAEKTLGTANDSFAEDSPARQQLGQA 390
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 174 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 215
>gi|312141008|ref|YP_004008344.1| mce family protein mce4a [Rhodococcus equi 103S]
gi|311890347|emb|CBH49665.1| putative Mce family protein Mce4A [Rhodococcus equi 103S]
Length = 443
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 9/103 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIP---GSVD-GLSTDSSVRFNGIPVGRIVG 70
V + F +L + + ++++ +V L ++ V+ G+ VG +
Sbjct: 12 VLGVAFFLVLALFLGGTIASYNKTFKHVVKVDLVTDTVGNALPRNADVKVRGLIVGEVRE 71
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ I PD + +TTA + + L G Y
Sbjct: 72 ---ASTSNGKVTSVMAIDPDKADLIPSNTTARLLPKTLFGERY 111
>gi|159904780|ref|YP_001548442.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C6]
gi|159886273|gb|ABX01210.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C6]
Length = 729
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 45/404 (11%), Positives = 116/404 (28%), Gaps = 17/404 (4%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S ++ + S + + V ++G VG + + + +
Sbjct: 146 SGFEASKYSDYKVDNIESALAICVVAPVYYSGELVGTVTLVDIVNKDDYWV-------DS 198
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
ATI + + T ++ + + +
Sbjct: 199 LKERTGNEATIFLKNVRISTTVQTNGQDAIGTKCSDEVYNTILNHQDYVGTANVLGSEYI 258
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ + + D + E P I ++A + ++ +
Sbjct: 259 TKYSPIEDKDGNVVGMVFTGIPEAPFVAVIHETRNEIIIIAILGLLLSILIALYTGRKIT 318
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN----IQVSSNNFVKSSDQVINTVHD 266
+ + + Q L + + + N +K+ D + +
Sbjct: 319 KPIEELKKGTYEFGNGNYDYKTEVKTGDELQELSDSFNGMAENVKNLMKTMDMDKLELAN 378
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ K D S + A +++ ++ + + Q Q
Sbjct: 379 LLNNVANVMNKVAKGDFTARADESGENNNLEKAINIAVSNVADLIKELREEVDLLNIQIQ 438
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI 386
K+ + E S + +++ + AE S + L+E + ++ + +E
Sbjct: 439 KVEDELKLAEETASQVTEAASQVAEASS--DQSGKLQEASDELENTYEVVKEVYSAAEDT 496
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ IG N S++G+ ++N + ++Q N DD +
Sbjct: 497 VKAAEEIGEN----SENGVKKVENAISRMQSITNVIDDLGKAIQ 536
>gi|296141469|ref|YP_003648712.1| hypothetical protein Tpau_3795 [Tsukamurella paurometabola DSM
20162]
gi|296029603|gb|ADG80373.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 338
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 37/339 (10%), Positives = 84/339 (24%), Gaps = 14/339 (4%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+G ++ + R+ DG E+ + V L + + G+
Sbjct: 14 AALAVIGAVTLAG--CTVSPANMDLRNPLADGDQYELTMEF-ADVLNLPVGARLALGGLT 70
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VGR+ + L + + A + L A++ L G Y+ L
Sbjct: 71 VGRVKAVSLSE---TAATVTARVDKTVTLPTDIHASVLQDTLLGEAYVRLEAPE------ 121
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
Q + P + E+T ++D + T E
Sbjct: 122 -QPSPSSTSLRAGATLPLAQTSPPRSVESTLTILADYFGSGSVQDISRTITKLNTSLPKE 180
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + T + ++ + + D + + +
Sbjct: 181 RPQFDQLSTQLS-RDVTGIGASTAEVNRLLDSVSDMADRTAKQEANFTYTLNPYNMKYWK 239
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
N +N V + + L +D S + + L N
Sbjct: 240 NQGKLMSNIGVLLPAVGGMLQQGYWLIPLMNSSSDLFELLTADMVSLGSAIHGGSILVNK 299
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
+ + ++ Q + + +
Sbjct: 300 NLAPFLAKPTVKVESVTGPGGQDLSPAAVKLLRMIGQAR 338
>gi|118470887|ref|YP_890122.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118172174|gb|ABK73070.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 382
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 41/375 (10%), Positives = 114/375 (30%), Gaps = 16/375 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLS--RSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M + ++G V + F + L+ + + ++ +++P L +S V
Sbjct: 1 MRT----LAIGSGAVLLAGCQFGGLNSLNMPGTAGHGPGSFKITVQLPDVAT-LPQNSPV 55
Query: 59 RFNGIPVGRIVGLFLD--QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--L 114
+ + VG + G+ + + + + D L + A + L G ++E
Sbjct: 56 MIDDVTVGSVSGIDAVQRPDGTFFAAVQLSLDGDVKLPANAVARVAQTSLLGSQHVELSE 115
Query: 115 STLRKEKKTIFQI---ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + + + + + R T + N N + +
Sbjct: 116 PVGKPPEGELREGSNISLDDAGRYPTTEEVLSSLGVVVNKGNLGALQDITDEVYAAVAGR 175
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
E +++ A I + + S ++ D + + K++
Sbjct: 176 SGSFADLVPRLAELTASLDAQTDDIIAAADGLNRFASVLARSSDSLGRTLDTLPAALKVL 235
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
V+ + S+ + D ++ +E+ +D+L+ D
Sbjct: 236 NDSRTNIVDAFTALRSFAEVGARILSETKDDFAADFKDLYAVVKELNDHVDYLIKDLELL 295
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+L N + + + + + + T + + ++++
Sbjct: 296 PTFPFHYKYLRN--AVRGDYLNVFATFDLTLRRTGESVFTTSGFDPNMKHMSEVLNPPEF 353
Query: 352 LMSKINNISALKENN 366
L + N+S +
Sbjct: 354 LTGALANLSGQAADP 368
>gi|325675355|ref|ZP_08155039.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
gi|325553326|gb|EGD23004.1| virulence factor mce family protein [Rhodococcus equi ATCC 33707]
Length = 443
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 37/103 (35%), Gaps = 9/103 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIP---GSVD-GLSTDSSVRFNGIPVGRIVG 70
V + F +L + + ++++ +V L ++ V+ G+ VG +
Sbjct: 12 VLGVAFFLVLALFLGGTIASYNKTFKHVVKVDLVTDTVGNALPRNADVKVRGLIVGEVRE 71
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
+ I PD + +TTA + + L G Y
Sbjct: 72 ---ASTSNGKVTSVMAIDPDKADLIPSNTTARLLPKTLFGERY 111
>gi|89898184|ref|YP_515294.1| hypothetical protein CF0377 [Chlamydophila felis Fe/C-56]
gi|89331556|dbj|BAE81149.1| hypothetical protein [Chlamydophila felis Fe/C-56]
Length = 267
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/136 (15%), Positives = 42/136 (30%), Gaps = 13/136 (9%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
K + GLF+ + F + + +S E+ + + G+S +V G
Sbjct: 6 RKAIFF--GLFLCIGILGLFSIMLFTPKSRGNGKQ--EIHVAFTH-ISGVSKGMNVCLAG 60
Query: 63 IPVGRIVG--------LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
VG + + D I LY T + + + G + + +
Sbjct: 61 KVVGSVASVHNIMDKGIVGDSGQLYCYELVLKIDSGISLYKDDTFAMYSPKIIGESIVNI 120
Query: 115 STLRKEKKTIFQIATE 130
R + A +
Sbjct: 121 IPGRIRDENNRLYAQD 136
>gi|326330428|ref|ZP_08196736.1| LigA [Nocardioidaceae bacterium Broad-1]
gi|325951703|gb|EGD43735.1| LigA [Nocardioidaceae bacterium Broad-1]
Length = 391
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/315 (10%), Positives = 84/315 (26%), Gaps = 6/315 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ G EV + +P + LS SSV NG G+I L + ++ +
Sbjct: 1 MGGLATMGGDDYEVDLVMPSAAQ-LSERSSVWINGHDAGKITALGV---KNGKAIVTVSV 56
Query: 88 RPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
D PL+ +T + G + + + + + A +
Sbjct: 57 DEDFAPLHDGSTTRVEWVSAVGERVLTIYPGPTKNAALPEGALVEGTSRQVEVDQVLQAL 116
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ I + + + A + + VL +
Sbjct: 117 DEPTRRRLTTLIGQLNDTAGGREDETRDTIRGASAAVGALGEVLQAVGQDGPAIRALVTQ 176
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + + I ++ ++ E + + +
Sbjct: 177 LSELTGAAASRKDGIANTVQQLNEISEATAREEKELNETLGRLPRVLQTAQGTLRKVPGA 236
Query: 267 VRETTQTFQEVGQKIDHLLS-DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
T +++ L S + + + + S+ ++ + D
Sbjct: 237 TEPTVDLLEDLRPSTQLLPSVSANLAPTLVDLRPTVAELRPLLSDADELLAQTPGLLDTS 296
Query: 326 QKIISTINTIENITS 340
+++ T+N +
Sbjct: 297 HQVVPTLNNFVDDVG 311
>gi|307608998|emb|CBW98411.1| hypothetical protein LPW_02631 [Legionella pneumophila 130b]
Length = 228
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/134 (12%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ +++ ++ GS+ GL T + V + G+ +G + + + + +
Sbjct: 2 ILGGTFFYI---EYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEVKVIEITENKEH 58
Query: 80 H-----SLAKALIRPDTPLYPSTTA-TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + I +A IT L T E + I + +
Sbjct: 59 SKVLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYK 118
Query: 134 RAMITATPSGINYF 147
+ + P +
Sbjct: 119 QTYYHSYPVFPTHN 132
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 14/159 (8%), Positives = 51/159 (32%), Gaps = 11/159 (6%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + + + T L ++ + + + T + + ++
Sbjct: 80 DPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVFPTHNSAEKYTS 139
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ ++ + + ++ + KE + Q+ + +N+ +PS+ L
Sbjct: 140 MEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQ-- 197
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++++ + + R P+ ++ G+
Sbjct: 198 ---------SLKQITSAAYSTQNLTDYLSRYPESLLRGK 227
>gi|31791771|ref|NP_854264.1| MCE-family protein MCE2A [Mycobacterium bovis AF2122/97]
gi|121636507|ref|YP_976730.1| mce-family protein mce2A [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224988979|ref|YP_002643666.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|31617358|emb|CAD93466.1| MCE-FAMILY PROTEIN MCE2A [Mycobacterium bovis AF2122/97]
gi|121492154|emb|CAL70619.1| mce-family protein mce2A [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|224772092|dbj|BAH24898.1| MCE-family protein [Mycobacterium bovis BCG str. Tokyo 172]
Length = 404
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + S GL S V +NG+ +GR+ + ++++ +
Sbjct: 34 KQFRGEFTPKTELTMV--ASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVL 91
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 92 DVNPRYISLIPVNVVADIEAATLFGNKY 119
>gi|15839991|ref|NP_335028.1| virulence factor [Mycobacterium tuberculosis CDC1551]
gi|148821791|ref|YP_001286545.1| MCE-family protein mce2A [Mycobacterium tuberculosis F11]
gi|253797523|ref|YP_003030524.1| MCE-family protein mce2A [Mycobacterium tuberculosis KZN 1435]
gi|254230929|ref|ZP_04924256.1| MCE-family protein mce2A [Mycobacterium tuberculosis C]
gi|254363547|ref|ZP_04979593.1| MCE-family protein mce2A [Mycobacterium tuberculosis str. Haarlem]
gi|289446142|ref|ZP_06435886.1| MCE-family protein mce2B [Mycobacterium tuberculosis CPHL_A]
gi|289552842|ref|ZP_06442052.1| MCE-family protein mce2A [Mycobacterium tuberculosis KZN 605]
gi|289744303|ref|ZP_06503681.1| virulence factor [Mycobacterium tuberculosis 02_1987]
gi|289752628|ref|ZP_06512006.1| virulence factor [Mycobacterium tuberculosis EAS054]
gi|289756668|ref|ZP_06516046.1| MCE-family protein mce2A [Mycobacterium tuberculosis T85]
gi|289760708|ref|ZP_06520086.1| MCE-family protein mce2A [Mycobacterium tuberculosis GM 1503]
gi|298524076|ref|ZP_07011485.1| mce-family protein mce2a [Mycobacterium tuberculosis 94_M4241A]
gi|308370000|ref|ZP_07666843.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu002]
gi|308370454|ref|ZP_07666933.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu003]
gi|308371713|ref|ZP_07667229.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu004]
gi|308373529|ref|ZP_07667598.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu005]
gi|308374050|ref|ZP_07667698.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu006]
gi|308375205|ref|ZP_07443072.2| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu007]
gi|308377470|ref|ZP_07668517.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu009]
gi|13880133|gb|AAK44842.1| virulence factor [Mycobacterium tuberculosis CDC1551]
gi|124599988|gb|EAY58998.1| MCE-family protein mce2A [Mycobacterium tuberculosis C]
gi|134149061|gb|EBA41106.1| MCE-family protein mce2A [Mycobacterium tuberculosis str. Haarlem]
gi|148720318|gb|ABR04943.1| MCE-family protein mce2A [Mycobacterium tuberculosis F11]
gi|253319026|gb|ACT23629.1| MCE-family protein mce2A [Mycobacterium tuberculosis KZN 1435]
gi|289419100|gb|EFD16301.1| MCE-family protein mce2B [Mycobacterium tuberculosis CPHL_A]
gi|289437474|gb|EFD19967.1| MCE-family protein mce2A [Mycobacterium tuberculosis KZN 605]
gi|289684831|gb|EFD52319.1| virulence factor [Mycobacterium tuberculosis 02_1987]
gi|289693215|gb|EFD60644.1| virulence factor [Mycobacterium tuberculosis EAS054]
gi|289708214|gb|EFD72230.1| MCE-family protein mce2A [Mycobacterium tuberculosis GM 1503]
gi|289712232|gb|EFD76244.1| MCE-family protein mce2A [Mycobacterium tuberculosis T85]
gi|298493870|gb|EFI29164.1| mce-family protein mce2a [Mycobacterium tuberculosis 94_M4241A]
gi|308325671|gb|EFP14522.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu002]
gi|308331899|gb|EFP20750.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu003]
gi|308335686|gb|EFP24537.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu004]
gi|308337265|gb|EFP26116.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu005]
gi|308343190|gb|EFP32041.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu006]
gi|308347057|gb|EFP35908.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu007]
gi|308355634|gb|EFP44485.1| MCE-family protein mce2A [Mycobacterium tuberculosis SUMu009]
gi|323720941|gb|EGB30006.1| MCE-family protein mce2A [Mycobacterium tuberculosis CDC1551A]
gi|326902421|gb|EGE49354.1| MCE-family protein mce2A [Mycobacterium tuberculosis W-148]
gi|328457306|gb|AEB02729.1| MCE-family protein mce2A [Mycobacterium tuberculosis KZN 4207]
Length = 404
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + S GL S V +NG+ +GR+ + ++++ +
Sbjct: 34 KQFRGEFTPKTELTMV--ASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVL 91
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 92 DVNPRYISLIPVNVVADIEAATLFGNKY 119
>gi|289568522|ref|ZP_06448749.1| MCE-family protein mce2A [Mycobacterium tuberculosis T17]
gi|289749086|ref|ZP_06508464.1| MCE-family protein mce2A [Mycobacterium tuberculosis T92]
gi|289542276|gb|EFD45924.1| MCE-family protein mce2A [Mycobacterium tuberculosis T17]
gi|289689673|gb|EFD57102.1| MCE-family protein mce2A [Mycobacterium tuberculosis T92]
Length = 404
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + S GL S V +NG+ +GR+ + ++++ +
Sbjct: 34 KQFRGEFTPKTELTMV--ASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVL 91
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 92 DVNPRYISLIPVNVVADIEAATLFGNKY 119
>gi|120610498|ref|YP_970176.1| hypothetical protein Aave_1818 [Acidovorax citrulli AAC00-1]
gi|120588962|gb|ABM32402.1| Mammalian cell entry related domain protein [Acidovorax citrulli
AAC00-1]
Length = 338
Score = 50.7 bits (118), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/111 (18%), Positives = 41/111 (36%), Gaps = 2/111 (1%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
S +L + P ++++ S +G+ + F+G P+GR+ L +
Sbjct: 46 IIGSGLYLLYARGVFEPTQQLVLTADDS-EGVVAGMDMTFSGFPIGRVRRTELAEGGDVR 104
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L + L S+ T+ +G+ G T I+ + + A
Sbjct: 105 ILIDVPRKDAHWLRESSVFTLV-RGIVGGTTIKAYSGILTDPPLPDGAVRP 154
>gi|127512724|ref|YP_001093921.1| hypothetical protein Shew_1796 [Shewanella loihica PV-4]
gi|126638019|gb|ABO23662.1| Mammalian cell entry related domain protein [Shewanella loihica
PV-4]
Length = 874
Score = 50.3 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/80 (22%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL EV I P S G+ + VR+ G+ VG++V + +D +
Sbjct: 23 LIALALGAWLG-IKSIRESGVEVRIHFP-SATGIDVGKTLVRYQGLTVGKVVDISID-DQ 79
Query: 78 PNHSLAKALIR-PDTPLYPS 96
L+ TP
Sbjct: 80 LQGVYVDLLMDYRSTPFLRD 99
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 31/80 (38%), Gaps = 1/80 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGI 109
G+S + VRF +P+G++ + +Y + + ++ + +
Sbjct: 395 GISAGAEVRFKQLPIGQVDSVEFKPDYSGLAYRIQIWPEFAKLIHQGSYFVAESALAIDA 454
Query: 110 TYIELSTLRKEKKTIFQIAT 129
+ +S ++ T+ + A
Sbjct: 455 SLDGVSVNTRDLTTLTKGAI 474
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 19/55 (34%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
S+ L S V + IPVG+IV L + A + + +
Sbjct: 162 SASLGSLDVGSQVFYRQIPVGKIVSYRLVNDDSILFNAYIEKKYSHLVKQDSRFW 216
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
++ + + + F GI +G + + L A I
Sbjct: 748 DDNLGSVKIGTPIIFRGIKIGEVKQVQLSTTGT-QVEITAQIAKGY 792
>gi|254773151|ref|ZP_05214667.1| virulence factor Mce family protein [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 371
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 4/98 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V + S GL + V G+PVG++ + ++ A+ + + +
Sbjct: 35 DTMTVTAQF-DSAAGLYEGNVVAVLGMPVGKVSKVT---SKGSYVEAELTVDKKVKIPAA 90
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A + + +EL+ + + T R
Sbjct: 91 VRAVTISTSILTDRQVELTPPYRGGPVLKNHDTIGLTR 128
>gi|215402357|ref|ZP_03414538.1| MCE-family protein mce2A [Mycobacterium tuberculosis 02_1987]
gi|215410130|ref|ZP_03418938.1| MCE-family protein mce2A [Mycobacterium tuberculosis 94_M4241A]
gi|215429422|ref|ZP_03427341.1| MCE-family protein mce2A [Mycobacterium tuberculosis EAS054]
gi|215444702|ref|ZP_03431454.1| MCE-family protein mce2A [Mycobacterium tuberculosis T85]
gi|218752229|ref|ZP_03531025.1| MCE-family protein mce2A [Mycobacterium tuberculosis GM 1503]
gi|254549544|ref|ZP_05139991.1| MCE-family protein mce2A [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185466|ref|ZP_05762940.1| MCE-family protein mce2A [Mycobacterium tuberculosis CPHL_A]
gi|294996101|ref|ZP_06801792.1| MCE-family protein mce2A [Mycobacterium tuberculosis 210]
gi|297633083|ref|ZP_06950863.1| MCE-family protein mce2A [Mycobacterium tuberculosis KZN 4207]
gi|297730061|ref|ZP_06959179.1| MCE-family protein mce2A [Mycobacterium tuberculosis KZN R506]
gi|313657388|ref|ZP_07814268.1| MCE-family protein mce2A [Mycobacterium tuberculosis KZN V2475]
Length = 389
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + S GL S V +NG+ +GR+ + ++++ +
Sbjct: 19 KQFRGEFTPKTELTMV--ASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVL 76
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 77 DVNPRYISLIPVNVVADIEAATLFGNKY 104
>gi|289573189|ref|ZP_06453416.1| MCE-family protein mce2A [Mycobacterium tuberculosis K85]
gi|289537620|gb|EFD42198.1| MCE-family protein mce2A [Mycobacterium tuberculosis K85]
Length = 404
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + S GL S V +NG+ +GR+ + ++++ +
Sbjct: 34 KQFRGEFTPKTELTMV--ASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRLAAKLVL 91
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 92 DVNPRYISLIPVNVVADIEAATLFGNKY 119
>gi|215425821|ref|ZP_03423740.1| MCE-family protein mce2A [Mycobacterium tuberculosis T92]
gi|219556431|ref|ZP_03535507.1| MCE-family protein mce2A [Mycobacterium tuberculosis T17]
Length = 389
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + S GL S V +NG+ +GR+ + ++++ +
Sbjct: 19 KQFRGEFTPKTELTMV--ASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVL 76
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 77 DVNPRYISLIPVNVVADIEAATLFGNKY 104
>gi|41406209|ref|NP_959045.1| hypothetical protein MAP0111 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118462753|ref|YP_879401.1| virulence factor Mce [Mycobacterium avium 104]
gi|41394557|gb|AAS02428.1| hypothetical protein MAP_0111 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118164040|gb|ABK64937.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 371
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 33/98 (33%), Gaps = 4/98 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
V + S GL + V G+PVG++ + ++ A+ + + +
Sbjct: 35 DTMTVTAQF-DSAAGLYEGNVVAVLGMPVGKVSKVT---SKGSYVEAELTVDKKVKIPAA 90
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A + + +EL+ + + T R
Sbjct: 91 VRAVTISTSILTDRQVELTPPYRGGPVLKNHDTIGLTR 128
>gi|256827515|ref|YP_003151474.1| YhgE/Pip-like protein [Cryptobacterium curtum DSM 15641]
gi|256583658|gb|ACU94792.1| YhgE/Pip-like protein [Cryptobacterium curtum DSM 15641]
Length = 724
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 47/425 (11%), Positives = 107/425 (25%), Gaps = 15/425 (3%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDS--SVRFN-GIPVGR 67
++ L WL+ + +D + + + +G +R N G V
Sbjct: 26 LILVGLILLPVMYAWLNTAASWDPYNNTQGLKVAVVNDDEG-YKGDFLPLRVNTGDSV-- 82
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L + + + A + + L + E +I
Sbjct: 83 VSSLR-ANDSFSWEFVDNDTAMEGVRSGRYYAALVIPSSFSADLMSLFSPNVEHSSIIYY 141
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
E+ T +G + + IE +
Sbjct: 142 TNEKENPIAPRITDAGAGVIQESIREQFTSTVSEVALSLSSDLVDFSQSDQLASYIERMG 201
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ S I + + ++ D S+ + N I +
Sbjct: 202 NSIDTASSDIHDAADRIRSFSRVMGA---TRSLVDSSASVMDSASDSSTRMQNAISSSED 258
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS-AFLENIAD 306
S+ V + ++ ++F +G + + ++ L N
Sbjct: 259 SLSSTASSLEGSVDAVSQALSKSAESFDSLGGQANQAFDAIGDSSQTASAQLRTLANRVL 318
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKEN- 365
S++ E + + I I + D +Q A+ I++ +
Sbjct: 319 VIKQSYDSLATALESVNTGHAFDAVITQIREASRIQGDLAQNLADTADSIDSGVSDSSTR 378
Query: 366 -NSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
+ +A N + S L+ Q + L T+ D
Sbjct: 379 RQQVADLIAQAKQGINAAKTDYNGDLTSSVGQLKQSLAQVSGSAQTISSDLDATMASLSD 438
Query: 425 CLNNF 429
++
Sbjct: 439 ATDSL 443
>gi|261340220|ref|ZP_05968078.1| PqiB protein [Enterobacter cancerogenus ATCC 35316]
gi|288317736|gb|EFC56674.1| PqiB protein [Enterobacter cancerogenus ATCC 35316]
Length = 877
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 32/92 (34%), Gaps = 9/92 (9%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLD 74
I + W Y+ + I S DG+ + VRF G+ VG + + L
Sbjct: 28 VIALMIAGWLIW----TSYEDRGNTITIDF-QSADGIVAGRTPVRFQGVEVGTVQDVRL- 81
Query: 75 QEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ N A I+ D L T + T
Sbjct: 82 GKGLNKIHVSASIKSDMKDALRSETQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 30/123 (24%), Gaps = 4/123 (3%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTT 98
+++ +P L+ + V F G+ VG + GL L + + I + ++
Sbjct: 750 IVVEVPE-AGSLNIGTPVLFRGMEVGTVTGLTL-GSLADRVMVTLRISERYQHLVRNNSV 807
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
+ + + P + K
Sbjct: 808 FWLASGYSLDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQPGKHFLLLESEPKE 867
Query: 159 SDS 161
Sbjct: 868 WRE 870
>gi|212710773|ref|ZP_03318901.1| hypothetical protein PROVALCAL_01841 [Providencia alcalifaciens DSM
30120]
gi|212686470|gb|EEB45998.1| hypothetical protein PROVALCAL_01841 [Providencia alcalifaciens DSM
30120]
Length = 779
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/104 (16%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ T++ F + + + + L Q+ ++ I+ S G+ + +R+ G
Sbjct: 19 RRKRTTISPFWLLPIIAIMIAGWLL--FQQWVERGTQITIQFS-SASGVVAGRTPIRYQG 75
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ VG + + + + + L A + D L T + T
Sbjct: 76 VDVGMVQTVSISGDMKS-VLVTANVNKDMRSALTSGTRFWLVTP 118
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 11/113 (9%), Positives = 26/113 (23%), Gaps = 3/113 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RPDTPLYPSTTATIRTQGL 106
+ + + F G+ +G + GL+L E + I + +T + +
Sbjct: 658 AGSIQVGTPILFRGLEIGTVTGLYL-GELSDRVYVATRIGKEYQYLIRDNTQFWLSSGYN 716
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
K + + P +
Sbjct: 717 LAFGLTGGVVKSGTFKQFVRGGISLATPPTVPLAPKAKPDQHFILKLEPPADW 769
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+ LS +R+ GI +G+I L L +
Sbjct: 537 VTLTTFDASKLSEGMPIRYLGINIGQIESLQLSADNREV 575
Score = 37.6 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 7/56 (12%), Positives = 21/56 (37%), Gaps = 5/56 (8%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G++ V + GI +G+++ L + + I + + + ++
Sbjct: 305 GVNVGQPVVYRGIKIGKVLQRHLTDDN---VQFQISIFNEFKHLVKQDSKFVANSR 357
>gi|240948583|ref|ZP_04752956.1| hypothetical protein AM305_06851 [Actinobacillus minor NM305]
gi|240297091|gb|EER47662.1| hypothetical protein AM305_06851 [Actinobacillus minor NM305]
Length = 886
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/123 (12%), Positives = 35/123 (28%), Gaps = 4/123 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LY 94
+I+ G+ D+ V + G+ VG + L L + L I +
Sbjct: 755 NGYPIIVE-TSDARGIEPDAPVLYRGMQVGIVKKLNLSELGDR-VLIHLSIENKYQHLVR 812
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
+T + ++ +S + + E + + P +
Sbjct: 813 NNTEFWAASGYTMDVSLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKPNRHFLLQRK 872
Query: 155 SKK 157
+
Sbjct: 873 IPQ 875
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 16/54 (29%), Gaps = 1/54 (1%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I I L +R+ G+ VG++ L L A +
Sbjct: 642 GYTYITLIAKDASKLFKGMDIRYMGLTVGKVEKLELQ-NAKKQIKVTAYLDGQY 694
Score = 41.5 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + + IR DG++ +++R+ G+ +G + +
Sbjct: 20 FWLLPIVAFAIGCLLF--FQILKEQGETITIRFNE-GDGITAGKTAIRYQGLQIGLVKKV 76
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ + +A I P+ L T +
Sbjct: 77 YFV-DNLKKVEVEAEINPEAKSVLKEGTIFWV 107
>gi|54296205|ref|YP_122574.1| hypothetical protein lpp0231 [Legionella pneumophila str. Paris]
gi|53749990|emb|CAH11378.1| hypothetical protein lpp0231 [Legionella pneumophila str. Paris]
Length = 228
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 8/87 (9%), Positives = 27/87 (31%), Gaps = 8/87 (9%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ +++ ++ GS+ GL T + V + G+ +G + + + + +
Sbjct: 2 ILGGTFFYI---EYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEVKVIEITENKEH 58
Query: 80 H-----SLAKALIRPDTPLYPSTTATI 101
+ + +
Sbjct: 59 SKVLIPVYVQFFVERTYGFSQDPIHLL 85
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 15/159 (9%), Positives = 52/159 (32%), Gaps = 11/159 (6%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + + + T L ++ + + + T R + + ++
Sbjct: 80 DPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYRSYPVFPTHNSAEKYTS 139
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ ++ + + ++ + KE + Q+ + +N+ +PS+ L
Sbjct: 140 MEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQ-- 197
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++++ + + R P+ ++ G+
Sbjct: 198 ---------SLKQITSAAYSTQNLTDYLSRYPESLLRGK 227
>gi|308187114|ref|YP_003931245.1| hypothetical protein Pvag_1608 [Pantoea vagans C9-1]
gi|308057624|gb|ADO09796.1| Uncharacterized protein yebT [Pantoea vagans C9-1]
Length = 877
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
V + + + ++ Y + I DG+ + +R+ G+ VG + G+ L
Sbjct: 28 VIAMLIACWLLW-----TNYQERGTTITINFQT-ADGIVPGRTPIRYQGVEVGTVQGINL 81
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ KA I+ D L T + T
Sbjct: 82 S-DDYRSIQIKASIKSDMRDALREDTQFWLVTP 113
Score = 44.2 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
LS + V F G+ VG + G L + I + ++ + +
Sbjct: 755 AGSLSLGTPVLFRGVEVGTVTGTSL-GNMADRVQIALRISKKYQHLVRNNSVFWLASGYN 813
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + + + + P ++ + K +
Sbjct: 814 LDFGLVGGVVKTGTFQQFIRGGIQFATPPTVPLAPQANPDKHFLLQDEAPKEWRN 868
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
LS +R+ GI VG++ L L ++
Sbjct: 641 DASKLSAGMPIRYLGINVGQVESLSLSKDNNQVV 674
>gi|226361222|ref|YP_002779000.1| Mce family protein [Rhodococcus opacus B4]
gi|226239707|dbj|BAH50055.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 343
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/96 (15%), Positives = 26/96 (27%), Gaps = 3/96 (3%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
GL + V G VGR+ G+ + H + A R++ L
Sbjct: 46 DAIGLYAGNPVTQMGYEVGRVEGIEPQGD---HVQVTFSLASGRSYPFDVRAVTRSKSLL 102
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
+EL + + + S
Sbjct: 103 ADRSLELVGNYTTGPELAPEQCIPLEHTHTPKSISE 138
>gi|41409387|ref|NP_962223.1| Mce1_1 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41398218|gb|AAS05839.1| Mce1_1 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 441
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 40/295 (13%), Positives = 93/295 (31%), Gaps = 12/295 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P + + S GL S V +NG+ +GR+ + ++ +
Sbjct: 42 GQFRGAFTPKTSLTML--ASRAGLVMDPGSKVTYNGVEIGRVGTISETVRDGKPAAKFTL 99
Query: 86 LIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
+ P + + A I+ + G Y+ L+T T + R++ T +
Sbjct: 100 EVYPRYLKLIPSNVNADIKATTVFGGKYVSLTTPAHPSPQKITPHTIIDARSVTTEINTL 159
Query: 144 INYFISNAENT-----SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
S AE + +S +++ + + E + + A ++ ++ + I
Sbjct: 160 FQTITSIAEKVDPVKLNLTLSAAAQSLSGLGEKFGQSVVNANALLDDVNPRMPQARKDIQ 219
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ +S F + + + Q + ++ F K
Sbjct: 220 GLAALGDTYADASPDLFDFLNNAVITSRTINAQQKDLDQALLSAAGFGNTGADLFTKGGP 279
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRS 313
+ HD+ T Q +I L+ + + + + N N +
Sbjct: 280 YLARGAHDLVPTAQLLDTYSPEIYCLMRNEHDALPATGAAEGGFNGYSLNMNTEA 334
>gi|260203753|ref|ZP_05771244.1| MCE-family protein mce2A [Mycobacterium tuberculosis K85]
Length = 389
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + S GL S V +NG+ +GR+ + ++++ +
Sbjct: 19 KQFRGEFTPKTELTMV--ASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRLAAKLVL 76
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 77 DVNPRYISLIPVNVVADIEAATLFGNKY 104
>gi|284034022|ref|YP_003383953.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
gi|283813315|gb|ADB35154.1| virulence factor Mce family protein [Kribbella flavida DSM 17836]
Length = 439
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 38/100 (38%), Gaps = 7/100 (7%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD--SSVRFNGIPVGRIVGLFL 73
+ WL+ + V +++ S GL + + V+ GI VG + +
Sbjct: 8 VAFIGFLCFLLWLTYAFYAKVFTDTVDVQLKTSHIGLQLNRHADVKLRGIIVGEVRAVST 67
Query: 74 DQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITY 111
D E + + ++P+ + +A I + L G Y
Sbjct: 68 DGE---EATVELSLKPEQVQQISSGVSARILPKTLFGEKY 104
>gi|297171832|gb|ADI22822.1| hypothetical protein [uncultured Oceanospirillales bacterium
HF0500_29K23]
Length = 85
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M++K + VGLF+ L + + S+ + ++ +VDGL +S V
Sbjct: 1 MKAKKEW-KVGLFLAIALVVAAALVINFSKGTNPFTKTTLLHLK-TKNVDGLKRNSVVLM 58
Query: 61 NGIPVGRIVGLFLDQEY 77
G+PVG I + LD +
Sbjct: 59 AGVPVGSISAIHLDTDT 75
>gi|311741980|ref|ZP_07715790.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311314473|gb|EFQ84380.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 398
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/356 (8%), Positives = 100/356 (28%), Gaps = 11/356 (3%)
Query: 12 LFVVSILFFSFFSI-----YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
L V + + + L V SVD L +S+V+ + + +G
Sbjct: 7 LVAVVAIMLTGGCLAHPNEMALPGQVALGDDGYTVNASF-ASVDNLVPNSAVQRDDVVIG 65
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + ++ ++ + D L + + T+ + L G ++++ + T+
Sbjct: 66 TVTAIEVEG---WDAVVTMRLLDDVKLPENVSFTVGQKTLLGAQFVDVVDPTEPVGTLAD 122
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
AT + + I + + +S S ++ + + + +
Sbjct: 123 GATVDQEVTGLYPATEDI-LAAVSLLLNNGGLSQLSTITTELNTTLADRVPQARDAVTRL 181
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + + +++ T + + + ++
Sbjct: 182 NDLTTTLDNRRGEIVATLESLNSLAGQVAEQRDTVTAAIGSISPGLQALENQRTDLVSAA 241
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
++ + + + + + + + + T F +
Sbjct: 242 TALGQFSSVTNQLINTSQEALLANLGALEPLLADLQASGNALPRSLDLLLTVPFPVSTTQ 301
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA-ELMSKINNISA 361
+ + I + N S++N +S E+ ++ +
Sbjct: 302 NALKGDYANLFITLDASIPALASAFFGPTLNPPSDINPASASPDAEVAQALDGLLQ 357
>gi|296165090|ref|ZP_06847642.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899549|gb|EFG79003.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 404
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/138 (15%), Positives = 45/138 (32%), Gaps = 13/138 (9%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLST 54
++ G+ V+S W + V +++P ++ L+
Sbjct: 23 RTRRGAVK-GVAVLSAAAVLTSCAKWHGIANVPMPGGPGSGPGSYTVYVQMPDTLA-LND 80
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE- 113
+S VR + VG + + L + + D L + TA I L G ++E
Sbjct: 81 NSRVRVADVFVGTVRAIQL---KNWVATLTLRLGKDVKLPRNATAKIGQTSLLGSQHVEL 137
Query: 114 LSTLRKEKKTIFQIATER 131
+ + + T
Sbjct: 138 AAPPNPSPEPLRDGDTIP 155
>gi|226946271|ref|YP_002801344.1| hypothetical protein Avin_42450 [Azotobacter vinelandii DJ]
gi|226721198|gb|ACO80369.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 771
Score = 50.3 bits (117), Expect = 6e-04, Method: Composition-based stats.
Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 8/104 (7%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
++ T ++V+ ++ S WL+ YD EV +R S +G+ + + V +
Sbjct: 8 RTRPASTWSAIWVLPLIALLIGS--WLA-WRAYDQAGIEVQVRFT-SGEGIQINKTEVIY 63
Query: 61 NGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP--LYPSTTATI 101
G+PVG++VGL LD E N +A + D L +T +
Sbjct: 64 KGMPVGKVVGLTLDDEGSNTGVIATLEMNKDVESYLRSNTRFWL 107
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 5/84 (5%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
S DGL + +R+ G+ VG++ G+ L + L +A I A + +Q
Sbjct: 527 DSGDGLKAGTPIRYKGLDVGKVEGVELS-DDLQSVLLRARITQAAE----RIARVGSQFW 581
Query: 107 AGITYIELSTLRKEKKTIFQIATE 130
+ L I E
Sbjct: 582 VVRPELGLMRTANLDTLISGPYIE 605
Score = 41.1 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + I VG + L + L + + ST
Sbjct: 400 VLTSDTLGSLDIGSPVLYRQIKVGSVQSFQLSRNRRRVLLGVHIEPEYASLVNSSTRFWN 459
Query: 102 RT 103
+
Sbjct: 460 AS 461
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L V + + VG++ G L L LI P
Sbjct: 648 LKAGVPVTYREVTVGKVTGFELGPNADR-VLIGILIEPRY 686
>gi|326382587|ref|ZP_08204278.1| mammalian cell entry related domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
gi|326198706|gb|EGD55889.1| mammalian cell entry related domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
Length = 366
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/367 (12%), Positives = 92/367 (25%), Gaps = 13/367 (3%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRS--------NQYDGPMAEVIIRIPGSVDGLST 54
++ V + + G V + L
Sbjct: 2 TRIKKAGVAAVALLTTVSLAACGVVPGITVEQIPLPAPGGIGDSITVHTSF-ENALNLPN 60
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
+ VR G+ VG + + + + DT L T A +R G ++ L
Sbjct: 61 KAKVRLGGMDVGEVESI---VAKNYRAEVTMNVAKDTQLPVGTGAELRQATPLGDVFVAL 117
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
K Q AT + ++ + S IS R ++ +
Sbjct: 118 QPPADASKGYVQDGGTLTGPISAAATVEDLLVSMTGLVD-SGSISSLQRIFTELSTAVGG 176
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
IE +T + + + T S T +
Sbjct: 177 NAPELHGAIEGFTTAIDKFNKNSAAVDEAMATTAVWSKELANGRTQIAAAINKLPAAINT 236
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
++ IL + S+ ++D + + E +D F
Sbjct: 237 INDQLGMILTTLDKSNKVTSATNDFLNSEQDAFAEMLGHLNTTLVALDKSAPIFGPLADR 296
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ S S S S + +IT+ ++ Q A +++
Sbjct: 297 LAELNPKWVKSTSGSAAAVSAKVYWLSPGVGFDAASRLPEGGDITNGMHSMEQTLARIIA 356
Query: 355 KINNISA 361
++
Sbjct: 357 RLTGTKG 363
>gi|83814592|ref|YP_444968.1| chemotaxis transducer, putative [Salinibacter ruber DSM 13855]
gi|83755986|gb|ABC44099.1| probable chemotaxis transducer, putative [Salinibacter ruber DSM
13855]
Length = 697
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 38/445 (8%), Positives = 115/445 (25%), Gaps = 25/445 (5%)
Query: 5 NYYTSVGLFVVSIL-FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ VG+F++ + + +N ++ +V V G
Sbjct: 217 VRWAMVGIFILLAAGIAAILYVLRSRVTNPLRSFARQLTDSEEENVT-------VSVEGA 269
Query: 64 PVGRIVGLFLDQEYPNHSLAK-ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I + +A+ D + ++ +
Sbjct: 270 R--EITAVAEAFNQQQRQIAEAMEALEDEKASVERRVEEAVRESEQQKERLQESVDTMLE 327
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
I + A + T I + +++ + A+
Sbjct: 328 AIGRFADGDLTVRLPTGREGAIGRLFEGFNEAVAGLRSIVGRVREAAGSTASATEQISAS 387
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E ++ + +++ + + Q V +
Sbjct: 388 SEQMAASAEEQSAQAEEVAAAVEELNQTIGENARSVQQVAEAAGDGSQQAQEGQQVVAEA 447
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-----KIDHLLSDFSSKMKSKET 297
++ + +++ + E +Q + + + L + + E+
Sbjct: 448 TGKMEEIAAEVQGTAETIERLQASSEEISQVVETIDDIAGQTNLLALNAAIEASRAGSES 507
Query: 298 SAFLEN------IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + A EI + ++ + I + ++++ E
Sbjct: 508 GSGDTGQGFGVVAEEVRQLAEETDQATTEIAEIIGEVQTEIQEAVEAARQSSANAEEGIE 567
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
L + + + E ++ SE+ + I ++Q+ S + +
Sbjct: 568 LSREASAVL--DEIVGSISRVEQMTDEIAAASEEQSTTSEEIARSVQSIS-TAAQESAAG 624
Query: 412 VRKLQETVNHFDDCLNNFERNPQDI 436
V ++ +T + + E Q
Sbjct: 625 VTEVSDTADRLERLSTELEETVQQF 649
>gi|240170397|ref|ZP_04749056.1| MCE-family protein [Mycobacterium kansasii ATCC 12478]
Length = 394
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/255 (7%), Positives = 67/255 (26%), Gaps = 5/255 (1%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
V + P GL + D+ V+ G+ VG++ + +
Sbjct: 26 GLFQGSFTDSVPVTVVSPR--AGLVMNPDAKVKMRGVEVGKVASIESRPDGKAVLHLAMQ 83
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ + I + + G ++E + + + Q +
Sbjct: 84 PSQLHLIPSNVLVDIASTTVFGAKFVELVPPDNPSSQPLRAGDVLEGQHVTVEINTVFQQ 143
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
K++++ I + + +++++ ++ + + T
Sbjct: 144 LTSLLNSIDPAKLNETLGAIASAVNGRGHEIGRMLSDLDHFLATQDPSLPALRHDLETLP 203
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
++ + T + + ++ L + ++ +
Sbjct: 204 AVSNAYADASQDLVTTADNAIRISKTIVDEQRNLDAFLISSIGLADMGNDVIGGNRQALT 263
Query: 266 DVRETTQTFQEVGQK 280
DV + +
Sbjct: 264 DVLHLLVPTTNLTNE 278
>gi|188533654|ref|YP_001907451.1| Conserved hypothetical protein YebT [Erwinia tasmaniensis Et1/99]
gi|188028696|emb|CAO96558.1| Conserved hypothetical protein YebT [Erwinia tasmaniensis Et1/99]
Length = 877
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 38/106 (35%), Gaps = 12/106 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + F+ ++ + W + Y + I + DG+ + VR+
Sbjct: 17 RRRISPFWLLPFIALMIA---GWLIW----SNYQQRGTTITIDF-ATADGIVPGRTPVRY 68
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
G+ VG + G+ + + KA I+ D L T + T
Sbjct: 69 QGVEVGLVEGISMT-DDLRTIKIKASIKSDMREALREHTQFWLVTP 113
Score = 45.3 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 25/112 (22%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
LS + V F G+ VG + G L + I + +T + +
Sbjct: 760 LSVGTPVLFRGVEVGTVTGTAL-GSMADRVQITLRISKKYQHLVRNNTVFWLASGYNLKF 818
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ Q + P + E
Sbjct: 819 GLTGGVVKTGTFQQFIQGGIAFATPPTVPLAPQASSGKHYLLEQEEPAGWRQ 870
>gi|126437560|ref|YP_001073251.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126237360|gb|ABO00761.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 395
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/315 (10%), Positives = 87/315 (27%), Gaps = 15/315 (4%)
Query: 1 MESKNYYTSVGL-FVVSILFFSFFSIYWLSRSNQY--------DGPMAEVIIRIPGSVDG 51
M + + VG + + N ++ + +P V
Sbjct: 1 MIVRGKVSRVGYRSIALGSGALLLAGCQFGGLNSLNMPGTAGHGAGSYKISVELPD-VST 59
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQ--EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
L +S V + + VG + G+ Q + ++ + + + L ++TA + L G
Sbjct: 60 LPQNSPVMIDDVTVGSVSGINAVQRSDGTFYAAVELALDGNVNLPENSTAKVAQTSLLGS 119
Query: 110 TYIE--LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+IE E + + + +R T + + +
Sbjct: 120 QHIELAPPQDEPEIGKLREGSQIPLERTGRYPTTEEV-LSSLGVVVNKGNLGALQDITDE 178
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + + ++ + + ++ + +
Sbjct: 179 AYAAVAGRQDSFTDLVPRLAELTTSLDRQTGDIIAAAEGLNRFAGILARSRDSLGRTLDT 238
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + I++ + + S + T D + V + ++ + D
Sbjct: 239 LPAALDVLNKNRANIVDAFAALRSFAIVGSRILSQTKDDFAADFKDLYPVIKSLNDNVDD 298
Query: 288 FSSKMKSKETSAFLE 302
F ++ T F
Sbjct: 299 FVKSLEFLPTFPFHY 313
>gi|226306852|ref|YP_002766812.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226185969|dbj|BAH34073.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 377
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 32/105 (30%), Gaps = 11/105 (10%)
Query: 14 VVSILFFSFFSIYWLS-------RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
V + W + V+I +P V +S +S V N + VG
Sbjct: 11 VAASAVLVLTGCQWSGLNSVSLPGAAGRGEGSFSVVIEMPD-VTSISPNSPVMVNDVTVG 69
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
I + H+ + L + TA I L G +
Sbjct: 70 SISAIE---TDNWHARVTVALDGSVSLPANATAKIGQTSLLGSKH 111
>gi|108798498|ref|YP_638695.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119867598|ref|YP_937550.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108768917|gb|ABG07639.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119693687|gb|ABL90760.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 380
Score = 50.3 bits (117), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 4/101 (3%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ + D V ++P V + +S VR + VG + + H+L +
Sbjct: 36 MPGTQGGDARSYVVQAQLPD-VGTIEPNSRVRVGDVNVGTVTKIE---RQGWHALITMRL 91
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
D L +TTAT+ L G ++EL+ A
Sbjct: 92 NGDVELPANTTATVGQTSLLGSLHVELNPPIDAPARGKLGA 132
>gi|331699193|ref|YP_004335432.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
gi|326953882|gb|AEA27579.1| virulence factor Mce family protein [Pseudonocardia dioxanivorans
CB1190]
Length = 384
Score = 49.9 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 36/130 (27%), Gaps = 19/130 (14%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN------- 61
V V +++ ++ L+ +N G R GL VR
Sbjct: 9 LVKFLVFALVTALATTVLALTIANAQGGDRTAYSARFTD-ASGLLPGDDVRIAGVVVGSV 67
Query: 62 -GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ + + + + L S TA + + L G ++ L+ +
Sbjct: 68 DDVKI--V--------DRRFAQVDFSVDSAQKLPGSVTAAVLYKNLIGQRFLSLAQGQGG 117
Query: 121 KKTIFQIATE 130
E
Sbjct: 118 NPVPLPPGGE 127
>gi|308049579|ref|YP_003913145.1| hypothetical protein Fbal_1868 [Ferrimonas balearica DSM 9799]
gi|307631769|gb|ADN76071.1| Mammalian cell entry related domain protein [Ferrimonas balearica
DSM 9799]
Length = 859
Score = 49.9 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 4/91 (4%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + L+ + ++ I+ P S +G+ + + VR+ G+ VG++ + L
Sbjct: 20 ILPITAFLLGAWLLA--SYVRERGTDIEIQFP-SANGIEANKTLVRYQGLVVGQVNQVEL 76
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
++E K + D L T + T
Sbjct: 77 NEEGGVTVTVKMSHQVDDLLRRGTQFWLVTP 107
Score = 43.8 bits (100), Expect = 0.051, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 28/78 (35%), Gaps = 1/78 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
+ L + + +I GLS + + + G PVG ++ + L + + A
Sbjct: 370 FQLDDTRPLNPGQGRLIHLSQSDATGLSIGAPLLYRGFPVGEVLQMALT-DDGIEATAWV 428
Query: 86 LIRPDTPLYPSTTATIRT 103
D + + + +
Sbjct: 429 SQPYDQLVKEQSRFWLHS 446
Score = 43.8 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 37/327 (11%), Positives = 91/327 (27%), Gaps = 17/327 (5%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ +R +GP V + + GL+ + + + + VG++ + L +
Sbjct: 487 VFTVFPNRQQALEGPAVTVTL-FAHELKGLTLGAPLYYRELEVGKVADIGLQGDGFA--- 542
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
K ++P A + K + ++ ++ E +
Sbjct: 543 VKLAVQPAYRQLVDQRAR-----------FWHQSPIKVEGSLAGVSIEAGPLPQLLRGGL 591
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
G + AE + D I+ +E L + I +D +
Sbjct: 592 GFDQLEGAAEADLRIFPDRQSAIEPSVELTLYAPAKVRLERNAAIRYLGHTIGQVDSVTL 651
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
+ + + + T + + + + + + N++ +
Sbjct: 652 SDDLQHQTVKASLAPKWQTHFLRNDARFYLVSADVSLAGAKNLDTLLTGNYIAALPGQSG 711
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS--KETSAFLENIADSTSNMRSSISAIRE 320
+ D Q + D L + K S L + + ++
Sbjct: 712 SREDHFTLLQDTPLLLPYDDGLRLVLNQSRLGSLKIGSPVLYRQMKVGEVVHTRLAEDGA 771
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQ 347
D + + N TS ++S
Sbjct: 772 SVDIEVQFDPRYQHLVNRTSQFWNASG 798
>gi|17547281|ref|NP_520683.1| hypothetical protein RSc2562 [Ralstonia solanacearum GMI1000]
gi|17429583|emb|CAD16269.1| probable transmembrane protein [Ralstonia solanacearum GMI1000]
Length = 558
Score = 49.9 bits (116), Expect = 7e-04, Method: Composition-based stats.
Identities = 46/512 (8%), Positives = 123/512 (24%), Gaps = 82/512 (16%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF 72
++ L ++ + I +G+ + VR+N + +G + +
Sbjct: 42 LLIWLVPMLAALVSIGLVAGQVRGHGPAITLGFQDGEGIEPGKTPVRYNDVDIGMVTAVR 101
Query: 73 LDQEYPNHSLAKALIRPD-------------TPLYPSTTATIRTQGLAGITYIELSTLRK 119
L + + L + + + L TYI +
Sbjct: 102 LSTD-LSRVLVTVQLNQEAADFATHGTRFWIVRPRAGMSGASGLGTLLSGTYIGADSGGS 160
Query: 120 EKKTIFQIATERNQRAMITAT--------PSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ E + PS + + +
Sbjct: 161 HEPETQFTGLENPPVVSLRQQGARFVLRGPSLGSVETGSPVYYRHVEVGQVTGTALDKDG 220
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ I H + ++++ + I
Sbjct: 221 AGVTIDVFIEAPYHRYVGRDTQWRHASGLGLRLDAAGLRVNAESFQTMLLGGIAFQPSPG 280
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID--------- 282
+ + + +Q + D +TV + + VG +D
Sbjct: 281 QPAGDAVPDGTVFGLQSGDLDAADGPDGKPSTVVMHFDQSLHGLSVGAAVDFRGVQLGEV 340
Query: 283 ---------HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+ + + S+ ++ T + + +
Sbjct: 341 TNVGVAFDPKTHTFVMPVTLNLYPDRLGQAFRASSEYGDAAAGKALLRTLVARGLRGQLR 400
Query: 334 TIENITSNLNDSSQ------------------------KFAELMSKINNISALKE---NN 366
T +T+ L + +L +++ +++ + +
Sbjct: 401 TGNLLTNQLYVALDMFPNAPPVQLDLNGTLIALPTIPNTLDDLQAQVADLAKTLDRVPLD 460
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNL-----------QNFSQSGL---NDIQNLV 412
L + + R + + Q +QS L D+ +
Sbjct: 461 QLGTHLGQRLDNARRLFALTDAQLAPQARATLAAARQAFDAAQAIAQSPLLRPADLSRVR 520
Query: 413 RKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+L +T+ D + ++P+ +VWG +
Sbjct: 521 EQLGQTLRALDTLTDTVAQHPESLVWGPAVDT 552
>gi|118618290|ref|YP_906622.1| MCE family lipoprotein LprM [Mycobacterium ulcerans Agy99]
gi|118570400|gb|ABL05151.1| MCE-family lipoprotein LprM [Mycobacterium ulcerans Agy99]
Length = 389
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQ------YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ V + + W ++ +GP + VI V+ + +S VR + V
Sbjct: 16 VLVTMVTLAAVSGCGWRGLNSLPLPGTEGNGPGSFVIQAQMPDVNNIQPNSRVRVADVTV 75
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
G + + H+L + L + TA I T L G
Sbjct: 76 GHVARIE---RQGWHALVTIRLDAGVALPANATARIGTTSLLGS 116
>gi|183982890|ref|YP_001851181.1| MCE family lipoprotein LprM [Mycobacterium marinum M]
gi|183176216|gb|ACC41326.1| MCE-family lipoprotein LprM [Mycobacterium marinum M]
Length = 389
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 37/104 (35%), Gaps = 9/104 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQ------YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ V + + W ++ +GP + VI V+ + +S VR + V
Sbjct: 16 VLVTMVTLAAVSGCGWRGLNSLPLPGTEGNGPGSFVIQAQMPDVNNIQPNSRVRVADVTV 75
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
G + + H+L + L + TA I T L G
Sbjct: 76 GHVARIE---RQGWHALVTIRLDAGVALPANATARIGTTSLLGS 116
>gi|296179482|gb|ADG96487.1| MceA [Gordonia cholesterolivorans]
Length = 388
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGI 109
L S V+ +G+ VGR+ + + E + + I L + A + L G
Sbjct: 52 LLPGSDVKLHGVVVGRVSEVTVADE---KARIRMEIDSGVTGELPTNVLAEMEPTTLFGR 108
Query: 110 TY 111
Y
Sbjct: 109 KY 110
>gi|317048470|ref|YP_004116118.1| mammalian cell entry related domain-containing protein [Pantoea sp.
At-9b]
gi|316950087|gb|ADU69562.1| Mammalian cell entry related domain protein [Pantoea sp. At-9b]
Length = 879
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 7/95 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + + + L Y + I S DG+ + +R+ G+ VG + G+
Sbjct: 23 FWLLPIIALLIAAWLL--WTNYQERGTIITINF-QSADGIVPGRTPIRYQGVEVGTVQGI 79
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
L + KA I+ D L +T + T
Sbjct: 80 VLS-DDYRSIQIKASIKSDMRDALRDNTQFWLVTP 113
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/115 (12%), Positives = 30/115 (26%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
LS + V F G+ VG + G L + I + ++ + +
Sbjct: 755 AGSLSVGTPVLFRGVEVGTVTGTSL-GNMADRVQVALRISKKYQHLVRNNSVFWLASGYN 813
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + Q + + P ++ + K +
Sbjct: 814 LNFGLIGGVVKTGTFQQFIQGGIQFATPPTVPLAPQAGADKHFLLQDEAPKDWRN 868
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 14/34 (41%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS 81
LS +R+ GI VG++ L L +
Sbjct: 641 DASKLSAGMPIRYLGINVGQVESLSLSADNNQVV 674
>gi|289750550|ref|ZP_06509928.1| MCE-family protein mce3A [Mycobacterium tuberculosis T92]
gi|289691137|gb|EFD58566.1| MCE-family protein mce3A [Mycobacterium tuberculosis T92]
Length = 155
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 13 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLTADRSGLVMDSGAKVMMRG 65
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ VGR+ + + N + + I P+
Sbjct: 66 VQVGRVAQIGRIEWAQNGASLRLEIDPEV 94
>gi|302523373|ref|ZP_07275715.1| secreted protein [Streptomyces sp. SPB78]
gi|302432268|gb|EFL04084.1| secreted protein [Streptomyces sp. SPB78]
Length = 420
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 40/408 (9%), Positives = 107/408 (26%), Gaps = 24/408 (5%)
Query: 24 SIYWLSR--SNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
+ WL+ + V++ GSV + + V+ G+ VG + + ++
Sbjct: 1 MLIWLAVAVYQKDFSDDPRVVVE-TGSVGNEMHIGAEVKLRGVVVGEVRAIDASRQG--- 56
Query: 81 SLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEK-KTIFQIATERNQRAMI 137
+ ++P + A + L G Y+ L + + A R+
Sbjct: 57 ARLTLAMKPGALKSIPDDVRAQMLPTTLFGERYVALVADTSKPGTPLGAGAVIPQDRSAN 116
Query: 138 TATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + S +S SR + + + + LT A+++ + L
Sbjct: 117 AIELQQVLDHTLPLLTAVQPQKLSATLSAVSRALDGRGDKLGETLTELDAHLKRFNPELP 176
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ +++ + V ++ + ++ +
Sbjct: 177 ALNEDLKQLVKVSHVYADAAPGIVDALHDFTTTSGTLAEKESDLSAAYAGTTRAAEDVDG 236
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQK----IDHLLSDFSSKMKSKETSAFLENIADS 307
+ D +I R T Q E + + L ++ +
Sbjct: 237 FLRANKDTIIRLSTTSRGTLQLLAEYSAEFPCTLRALTEFAPRMDRALGKGTGHPGVHVE 296
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ + S + + ++ A + + +
Sbjct: 297 VTTVPSRGAYRPGRDTPAYTASGGPHCYSAPYLGEASGTRPAATASASADKDLGPVNSPQ 356
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+ ++ S N + D ++ +L
Sbjct: 357 ENDLVNELLSAPAQDTKSA----GSTKNPESAGGGTRAPDAESPAEEL 400
>gi|240173397|ref|ZP_04752055.1| MCE family lipoprotein LprM [Mycobacterium kansasii ATCC 12478]
Length = 378
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 10/107 (9%)
Query: 9 SVGLFVVSILFFSFFSIYW------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
V L V + + L + + ++P V L +S V+
Sbjct: 9 RVWLLTVLAVIGLAGCGWRGLNSIPLPGTAGRGPGAFTIQAQLPD-VGTLEQNSRVQVGD 67
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+ VG + + H+L + D L + TAT+ L G
Sbjct: 68 VTVGNVTKIE---RQGWHALLTIRLDGDVELPANATATLGQTSLLGS 111
>gi|254363206|ref|ZP_04979255.1| paraquat-inducible protein B [Mannheimia haemolytica PHL213]
gi|112361406|gb|ABI15746.1| PqiB [Mannheimia haemolytica]
gi|153095100|gb|EDN75651.1| paraquat-inducible protein B [Mannheimia haemolytica PHL213]
Length = 888
Score = 49.9 bits (116), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/117 (11%), Positives = 32/117 (27%), Gaps = 1/117 (0%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTAT 100
II + +G+ ++ V + G+ VG + L L + + + +T
Sbjct: 761 IIVETTNANGIQPEAPVLYRGMQVGIVSRLGLSELGDRVLIYVNIQDKYKHLVRTNTQFW 820
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ ++ +S + E + P +
Sbjct: 821 QASGYTMDVSLQGVSMNSGTMSQLLNGGIEFSTPYTKVVKPQAQPNRRFFLQRKLPD 877
Score = 43.8 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 16/117 (13%)
Query: 1 MESKNYYT---------SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG 51
ME + + F + + + IR DG
Sbjct: 3 MEENTHTVVDAQIRQPRKISPFWLLPIVAFIIGALLF--FQILKEQGETITIRFSK-GDG 59
Query: 52 LSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
++ +++R+ G+ +G++ ++ + +A I P+ L T +
Sbjct: 60 ITAGKTAIRYQGLQIGQVKRVYFV-DNLKEVEVQAEINPEAKSILRKQTKFWLVQPS 115
Score = 38.4 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ I LS +++ G+ VG+I L L A A I+
Sbjct: 642 TSGNTYLTLIAKDASKLSEGMDIKYMGLTVGQIEKLELQ-NAKKQIKATAYIQRKY 696
Score = 37.6 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 5/89 (5%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
S+ G+S S V + VG ++ + + I+P+ L + I
Sbjct: 540 DSLSGISEGSLVLYRDFQVGEVLKITP---KQQKFEVELFIQPNYRHLLTEKSRFWIEPA 596
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQ 133
++ ++ + A +
Sbjct: 597 TSVDVSLKGVNITTAPLMRTLKGAISFDD 625
>gi|254820125|ref|ZP_05225126.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 379
Score = 49.9 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/112 (18%), Positives = 38/112 (33%), Gaps = 16/112 (14%)
Query: 9 SVGLFVVSILFFSFFSIY-----------WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
VG+ +L S+ L + EV ++P V+ + +S
Sbjct: 6 WVGV-TAGLLVALAGSLLSGCGWRGLNSILLPGTAGGGPGSYEVKAQMPDVVN-VQPNSR 63
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
V+ + VG + + H+L + + L + TA I L G
Sbjct: 64 VQVGDVTVGTVTNVE---REGWHALLTMRLDGNVKLPANATAKIGQTSLLGS 112
>gi|118464886|ref|YP_883275.1| virulence factor Mce [Mycobacterium avium 104]
gi|118166173|gb|ABK67070.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 430
Score = 49.9 bits (116), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 45/129 (34%), Gaps = 7/129 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ ++ + S GL S V +NG+ +GR+ + ++ +
Sbjct: 31 GQFRGAFTEKTQLTMI--ASRAGLVMDPGSKVTYNGVEIGRVGTISETVRDGKPAAKFTL 88
Query: 86 LIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
+ P + + A I+ + G Y+ L+T T + R++ T +
Sbjct: 89 EVYPRYLKLIPSNVNADIKATTVFGGKYVSLTTPAHPSPQKITPHTIIDARSVTTEINTL 148
Query: 144 INYFISNAE 152
S AE
Sbjct: 149 FQTITSIAE 157
>gi|226304395|ref|YP_002764353.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183510|dbj|BAH31614.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 354
Score = 49.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 41/309 (13%), Positives = 90/309 (29%), Gaps = 20/309 (6%)
Query: 1 MESKNYYTSVGLFVV-SILFFSFFSIYWLSRSNQY------DGPMAEVIIRIPGSVDGLS 53
M ++ G+ ++ F + DG V +++ G DGL
Sbjct: 1 MTRQSVRIVAGIVIIGVGSVAVFAFGGCSAGIQDLPLGRSADGDAYNVALQLAG-ADGLV 59
Query: 54 TDSSVRFNGIPV-GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
+ VR +G V GR+ L D + + TPL + A++ G +I
Sbjct: 60 LGADVR-SGQKVIGRVSALSADVVG---ADVTLSLDAATPLPDNVEASVELPSALGNPFI 115
Query: 113 E-LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHI 165
L + T R I + + + + +
Sbjct: 116 RLLVPEVPSGSMLSDGDTIPESRTEIGPQVESALATLGTVLTGSGIDQLDTVVRELNTAF 175
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ T + + S+ + +D + + + +
Sbjct: 176 SGRSGEVRSLTDTLTSLMAEASSHRSEFDEAVDLAARVSSQLAGQRVVVDNYLDSVPQVV 235
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S+ K +N ++ ++ S D + +HD T +I L
Sbjct: 236 SILVGQKDQIASLLNSTVQLATNANTILDSSPDGLDAMLHDASTVVGTLDSFNWEIGQTL 295
Query: 286 SDFSSKMKS 294
++ + +++
Sbjct: 296 ANMNGLLEN 304
>gi|77461001|ref|YP_350508.1| hypothetical protein Pfl01_4780 [Pseudomonas fluorescens Pf0-1]
gi|77385004|gb|ABA76517.1| putative paraquat-inducible protein [Pseudomonas fluorescens Pf0-1]
Length = 767
Score = 49.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 8/94 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
++V+ ++ WL Y+ E+ +R S +G+ + + V + G+PVG++
Sbjct: 18 IWVLPLIALIIGG--WLG-WRAYNETGIEIQVRF-ESGEGIQANKTEVVYKGMPVGKVKA 73
Query: 71 LFLDQEYPNH-SLAKALIRPDTP--LYPSTTATI 101
L LD E + +A + D L ST +
Sbjct: 74 LKLDDEGNSKGVIATIEMNKDVDQYLKTSTRFWL 107
Score = 45.3 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 32/81 (39%), Gaps = 5/81 (6%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
+ L S+ V+ DGL + + VRF G+ VG+I + L + + A
Sbjct: 506 FRLFASHDEANQKGAVVTIKVDRADGLRSGTPVRFKGLDVGKIESVDLT-DDLQSVILTA 564
Query: 86 LIRPDTPLYPSTTATIRTQGL 106
I T + A + +Q
Sbjct: 565 RI---TEVPEK-IARVGSQFW 581
Score = 40.3 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L V + I VG++ G L + + L LI P
Sbjct: 647 LKPGVPVTYREITVGKVTGYEL-GQTADRVLVHILIEPKY 685
Score = 39.9 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 5/59 (8%), Positives = 17/59 (28%), Gaps = 1/59 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTAT 100
+ ++ + S + + + VG + + + + + ST
Sbjct: 400 VLFTDTLGSIDVGSPILYKQVKVGSVQSYQFSKTRKQLVIGVHIEKEYENLVNASTRFW 458
>gi|315441810|ref|YP_004074689.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260113|gb|ADT96854.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 381
Score = 49.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 78/257 (30%), Gaps = 6/257 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + +++P ++ L+ +S VR + VGR+ + L + +
Sbjct: 35 LPGGPGTGSERTTIYVQMPDTLA-LNVNSRVRVADVYVGRVRAIEL---RNWVATLTLDL 90
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELS-TLRKEKKTIFQIATERNQRAMITATPSGINY 146
P+ L +T A I L G +++L + + T + A T +
Sbjct: 91 EPNIALPVNTQAKIGQTSLLGSQHVQLDLPPDPSPQRLESGDTITLENASAFPTTERVLA 150
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
I++ +++ ++ + + + T A D +
Sbjct: 151 SIASILTG-GGVANLETIQSEVYNVLNGRADQIRDFLNQLDTFTAELNQQRDDITRAIDS 209
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
T N D + + + + + I+ + + D
Sbjct: 210 TNRLLTIVAQRNETLDAVLTEFPPLIKHFADTRDLFGDAIESLGRISNAAVAALEPANGD 269
Query: 267 VRETTQTFQEVGQKIDH 283
+ + Q Q +++
Sbjct: 270 MNQNLQNLQRPLRELGK 286
>gi|300717050|ref|YP_003741853.1| Mammalian cell entry related protein [Erwinia billingiae Eb661]
gi|299062886|emb|CAX60006.1| Mammalian cell entry related protein [Erwinia billingiae Eb661]
Length = 853
Score = 49.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 36/93 (38%), Gaps = 10/93 (10%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + + I+ + Y V I + DG+ + VR+ G+ VG + G+ +
Sbjct: 3 LIALLIAGWLIW-----SNYQERGTTVTIDF-ATADGIVPGRTPVRYQGVEVGLVQGISM 56
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ KA I+ D L T + T
Sbjct: 57 T-DDLRTIKIKASIKSDMKDALRDQTQFWLVTP 88
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 27/112 (24%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
+S + V F GI VG + G L I + ++ + +
Sbjct: 735 VSVGTPVLFRGIEVGTVTGTSLGAMADR-VQITLRISKKYQHLVRNNSVFWLASGYNLKF 793
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
I + Q I P + E+ K
Sbjct: 794 GLIGGVVKTGTFQQFIQGGIAFATPPTIPLAPQATSGKHYLLEDEEPKDWRK 845
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 38/373 (10%), Positives = 86/373 (23%), Gaps = 22/373 (5%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ L+T S V + IPVGR+ ++ LI L + +
Sbjct: 144 DLGSLNTGSLVYYRKIPVGRVYDYSINPGNKG-VTVDVLIDRRFTNLLKKDSRFWNVSGV 202
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN--------YFISNAENTSKK 157
A + + + + A + A S N + +
Sbjct: 203 KADVGLNGVKVQLESVAALVNGAIAFDSPAQSEQAKSEDNFDLYPDLAHSHRGVIISLDL 262
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
S + + T+ + ID + T + ++
Sbjct: 263 PSGKNLKANSTPLMYQGLEVGTLTAMTLQPGGKVTGELTIDPSVTGLMRTGTRIEMRSPK 322
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
++ D S ++L ++ + Q + + +
Sbjct: 323 ISLNDTSLSSLLTGNTLELVPGEGAPQDHYQVLESNEALLQQPNSLELKLTAPESYGIDA 382
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
GQ I + + + N R + + + +
Sbjct: 383 GQPIMLHGMQIGQVVNRSLNEQGVNFVIAIAGNYRELVHGDSKFIINSRLDVKLGIDGME 442
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ +S+ I + K +E +
Sbjct: 443 VLGA--SASEWVDG------GIRLDPGSKGAVKQNYPLYANAEKAAE---GITSNQLPTT 491
Query: 398 QNFSQSGLNDIQN 410
+ L D+Q
Sbjct: 492 LTLTAKSLPDVQA 504
Score = 38.0 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 4/58 (6%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
LS +R+ GI +G+I L L+QE L P Y A I ++
Sbjct: 618 DATKLSAGMPIRYLGITIGQIEDLALNQEKNEVVAKGVL----YPQYVDDFARIGSRF 671
>gi|254821781|ref|ZP_05226782.1| LprN [Mycobacterium intracellulare ATCC 13950]
Length = 384
Score = 49.9 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 39/377 (10%), Positives = 116/377 (30%), Gaps = 11/377 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + + G +++ F+ + + + + V + +P L +S V
Sbjct: 4 MWLRASGLAAGSVLLAGCQFNGLNSLAMPGTAGHGSGAYSVTVELPDVAT-LPQNSPVMV 62
Query: 61 NGIPVGRIVGLFLDQ--EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ + VG + G+ +Q + ++ K + + L ++TAT+ L G +I+L+ +
Sbjct: 63 DDVTVGSVAGIAAEQRADGSFYAAVKLALNKNVVLPANSTATVAQTSLLGSMHIDLARPK 122
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFIS-NAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + A P+ + + + +
Sbjct: 123 NKPAVGRLTDGSKITEANTGRYPTTEEVLSALGVVVNKGNVGALEEITDETYRAVAGRQD 182
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ I ++ + + ++ ++ S + + +
Sbjct: 183 QFVDLIPRLAELTSGLNRQVNDIIDAVDGLNRFSGALARDKDNLGRALDTLPEAIRVLNK 242
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ I+E +S + T D + V + ++ +F + ++ T
Sbjct: 243 NRDHIVEAFGALHKLANVTSHVLAKTKVDFAADMKDLYSVVKTLNDNRKNFVTSLQLLLT 302
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
F + ++ + + + T+ + + E+++ +
Sbjct: 303 FPF-----PNFGIKQAVRGDYLNVFTTFDLTLRRLGETFFTTAYFDPNMAHMDEILNPPD 357
Query: 358 NISALKENNSLFKDAQR 374
++ E +L A
Sbjct: 358 FLTG--ELANLSGQAAD 372
>gi|207728064|ref|YP_002256458.1| hypothetical protein (partial sequence n terminus) [Ralstonia
solanacearum MolK2]
gi|206591308|emb|CAQ56920.1| hypothetical protein (partial sequence n terminus) [Ralstonia
solanacearum MolK2]
Length = 361
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 19/46 (41%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
V++ S+ GL+ + V F GI VG I + + H
Sbjct: 291 SQTVVMYFHRSLRGLTVGAPVEFKGINVGEIKSIGIHYSKERHEFV 336
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 38/136 (27%), Gaps = 7/136 (5%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP----LYPSTTATIRT 103
+ L T + V F + VG++ +D + I + P + S+ +
Sbjct: 173 DLGSLDTGAPVYFRRVRVGQVTSYDIDADGEG---VTLHIFVNAPFDRFVTRSSRFWNAS 229
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR 163
+ L + T+ P+ N N + + D
Sbjct: 230 GIDLKLDASGLKVDMQSLLTVALGGIAFQSPEDADRDPAPQNTEFQLVRNEAMALKDPEH 289
Query: 164 HIQKIIENIEKPLTTT 179
Q ++ + L
Sbjct: 290 VSQTVVMYFHRSLRGL 305
Score = 43.0 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 9/77 (11%), Positives = 26/77 (33%), Gaps = 5/77 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + ++R G V S +G+ + V++ + +G + + L
Sbjct: 28 LVPIVALAVGVTLMTRVILARGAQITVT---FSSAEGIEAGKTRVKYKSVDIGVVKDVGL 84
Query: 74 DQEYPNHSLAKALIRPD 90
++ + D
Sbjct: 85 TEDRSGAV-VMIELTRD 100
>gi|145221302|ref|YP_001131980.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145213788|gb|ABP43192.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 381
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 78/257 (30%), Gaps = 6/257 (2%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + +++P ++ L+ +S VR + VGR+ + L + +
Sbjct: 35 LPGGPGTGSERTTIYVQMPDTLA-LNVNSRVRVADVYVGRVRAIEL---RNWVATLTLDL 90
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELS-TLRKEKKTIFQIATERNQRAMITATPSGINY 146
P+ L +T A I L G +++L + + T + A T +
Sbjct: 91 EPNIALPVNTQAKIGQTSLLGSQHVQLDLPPDPSPQRLESGDTITLENASAFPTTERVLA 150
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
I++ +++ ++ + + + T A D +
Sbjct: 151 SIASILTG-GGVANLETIQSEVYNVLNGRADQIRDFLNQLDTFTAELNQQRDDITRAIDS 209
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
T N D + + + + + I+ + + D
Sbjct: 210 TNRLLTIVAQRNETLDAVLTEFPPLIKHFADTRDLFGDAIESLGRISNAAVAALEPANGD 269
Query: 267 VRETTQTFQEVGQKIDH 283
+ + Q Q +++
Sbjct: 270 MNQNLQNLQRPLRELGK 286
>gi|254821570|ref|ZP_05226571.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 371
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 17/98 (17%), Positives = 34/98 (34%), Gaps = 4/98 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
VI + S GL + V G+PVG++ + ++ A+ + + +
Sbjct: 35 DTMTVIAQF-DSAAGLYEGNVVAVLGMPVGKVSKVT---SKGSYVEAELTVDKKVKIPAA 90
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQR 134
A T + +EL+ + + T R
Sbjct: 91 VRAVTITTSILTDRQVELTPPYRSGPVLKNHDTIGLTR 128
>gi|107099637|ref|ZP_01363555.1| hypothetical protein PaerPA_01000653 [Pseudomonas aeruginosa PACS2]
Length = 768
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGI 63
+ ++++ + + L + + +D ++ +R S DG+ + + V + GI
Sbjct: 13 SNWSAIWVLPLVALAIGAWLAW-----RAFDQAGVDIQVRF-ESGDGIQANKTEVLYKGI 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
VG++ L + ++ +A I+ + L T +
Sbjct: 67 SVGKVTDLHVSKDIKG-VVATIEIKKEAQEYLSKDTRFWL 105
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQG 105
+ DGL + +RF G+ +G+I + L+ + A+ + T +
Sbjct: 524 DNADGLREGTPIRFKGLDIGKIESVELNPDLSGVLMKARLTSAGERVARSGTRFWVVRPA 583
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + L TL ++ +R
Sbjct: 584 LGLLRTENLGTLVSGPYIEALPSSAPGERQARFQ 617
Score = 42.2 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 30/366 (8%), Positives = 79/366 (21%), Gaps = 10/366 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L S V + I VG++ L + K I P + T +
Sbjct: 169 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAYADLVRKHTRFWNASGISISG 227
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ T+ + T +P + R K+
Sbjct: 228 GLSGFKVHSESLLTLVAGGIAFSTPENRTDSPPTDPSKPFRLYDDYDAAQAGLRVKLKMN 287
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ T + + K + + ++ + D++ +
Sbjct: 288 DVSGIDPGRTPVMFNGVQV-------GLVKSIDMGKDYSSATADLAMDPRVEDMLLEGTE 340
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ I + N++ + L +
Sbjct: 341 FWTVKPSISLAGITGLEALVKGNYIDVRFAKSGAPSREFTIRPKAPPLNTDAPGLHLVLT 400
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
S S R+ + + ++ +
Sbjct: 401 SDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWNSSG 460
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
L ++ + E+ + T + + + + + + + +IQ
Sbjct: 461 ITLTGNLSGVQVKSESLQTLITGGISFDTLDPKAPTVTKVRRFTLFDSEEAAMARGVEIQ 520
Query: 410 NLVRKL 415
+
Sbjct: 521 LSIDNA 526
>gi|194473366|emb|CAQ86605.1| virulence factor Mce family protein [Mycobacterium avium subsp.
paratuberculosis]
Length = 103
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVG 70
F+ ++ F++ ++ + P E+ + S GL S V +NG+ +GR+
Sbjct: 24 FITVVVLAVIFTLVYI-QFRGXFTPKTELTML--ASRAGLVMDPGSKVTYNGVEIGRVGS 80
Query: 71 L-FLDQEYPNHSLAKALIRPDT 91
+ ++ + + P
Sbjct: 81 ISETVRDGKPAAKFTLEVYPRY 102
>gi|229492715|ref|ZP_04386516.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229320374|gb|EEN86194.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 391
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 30/84 (35%), Gaps = 4/84 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + V+I +P V +S +S V N + VG I + H+ +
Sbjct: 22 LPGAAGRGEGSFSVVIEMPD-VTSISPNSPVMVNDVTVGSISAIE---TDNWHARVTVAL 77
Query: 88 RPDTPLYPSTTATIRTQGLAGITY 111
L + TA I L G +
Sbjct: 78 DGSVSLPANATAKIGQTSLLGSKH 101
>gi|15599884|ref|NP_253378.1| hypothetical protein PA4689 [Pseudomonas aeruginosa PAO1]
gi|116052834|ref|YP_793151.1| paraquat-inducible protein B-like protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|218893784|ref|YP_002442653.1| paraquat-inducible protein B-like protein [Pseudomonas aeruginosa
LESB58]
gi|254238572|ref|ZP_04931895.1| hypothetical protein PACG_04726 [Pseudomonas aeruginosa C3719]
gi|254244409|ref|ZP_04937731.1| hypothetical protein PA2G_05265 [Pseudomonas aeruginosa 2192]
gi|9950946|gb|AAG08076.1|AE004882_7 hypothetical protein PA4689 [Pseudomonas aeruginosa PAO1]
gi|115588055|gb|ABJ14070.1| paraquat-inducible protein B-like protein [Pseudomonas aeruginosa
UCBPP-PA14]
gi|126170503|gb|EAZ56014.1| hypothetical protein PACG_04726 [Pseudomonas aeruginosa C3719]
gi|126197787|gb|EAZ61850.1| hypothetical protein PA2G_05265 [Pseudomonas aeruginosa 2192]
gi|218774012|emb|CAW29828.1| paraquat-inducible protein B-like protein [Pseudomonas aeruginosa
LESB58]
Length = 768
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGI 63
+ ++++ + + L + + +D ++ +R S DG+ + + V + GI
Sbjct: 13 SNWSAIWVLPLVALAIGAWLAW-----RAFDQAGVDIQVRF-ESGDGIQANKTEVLYKGI 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
VG++ L + ++ +A I+ + L T +
Sbjct: 67 SVGKVTDLHVSKDIKG-VVATIEIKKEAQEYLSKDTRFWL 105
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQG 105
+ DGL + +RF G+ +G+I + L+ + A+ + T +
Sbjct: 524 DNADGLREGTPIRFKGLDIGKIESVELNPDLSGVLMKARLTSAGERVARSGTRFWVVRPA 583
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + L TL ++ +R
Sbjct: 584 LGLLRTENLGTLVSGPYIEALPSSTPGERQARFQ 617
Score = 42.2 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 30/366 (8%), Positives = 79/366 (21%), Gaps = 10/366 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L S V + I VG++ L + K I P + T +
Sbjct: 169 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAYADLVRKHTRFWNASGISISG 227
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ T+ + T +P + R K+
Sbjct: 228 GLSGFKVHSESLLTLVAGGIAFSTPENRTDSPPTDPSKPFRLYDDYDAAQAGLRVKLKMN 287
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ T + + K + + ++ + D++ +
Sbjct: 288 DVSGIDPGRTPVMFNGVQV-------GLVKSIDMGKDYSSATADLAMDPRVEDMLLEGTE 340
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ I + N++ + L +
Sbjct: 341 FWTVKPSISLAGITGLEALVKGNYIDVRFAKSGAPSREFTIRPKAPPLNTDAPGLHLVLT 400
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
S S R+ + + ++ +
Sbjct: 401 SDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWNSSG 460
Query: 350 AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
L ++ + E+ + T + + + + + + + +IQ
Sbjct: 461 ITLTGNLSGVQVKSESLQTLITGGISFDTLDPKAPTVTKVRRFTLFDSEEAAMARGVEIQ 520
Query: 410 NLVRKL 415
+
Sbjct: 521 LSIDNA 526
>gi|296166529|ref|ZP_06848960.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295898141|gb|EFG77716.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 374
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 36/346 (10%), Positives = 107/346 (30%), Gaps = 6/346 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL--DQEYPNHSLA 83
+ + + G + + +P L +S V + + VG + G+ + ++
Sbjct: 19 LSMPGTAGHGGGAYSITVDLPDVAT-LPQNSPVMVDDVTVGSVAGIQAMQRSDGSFYAAV 77
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
K + + L ++TAT+ L G +I+L+ + + + + P+
Sbjct: 78 KLALDENVVLPANSTATVAQTSLLGSMHIDLARPKDKPAVGRLTDGSKISESHTGRYPTT 137
Query: 144 INYFIS-NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
+ + + + + + + ++ + A ++ ++
Sbjct: 138 EEVLSALGVVVNKGNVGALEEITDETYQAVAGRQDQFVDLVPRLAELTAGLNRQVNDIID 197
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
S + + + I+E + +S +
Sbjct: 198 AVDGLNRFSATLAHDRDNLGRALDTLPEAIRVLNKNREHIVEAFNALKKLAMVTSRVLAK 257
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI--ADSTSNMRSSISAIRE 320
T D E + V + ++ S+F + ++ T F + + +
Sbjct: 258 TKVDFAEDLKGLYSVVKALNDSRSEFVTSLQLLLTFPFPNFGIKQSVRGDYLNVFTTYDL 317
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+ + T + +++N+ L+ ++ N+S +
Sbjct: 318 TLRRIGETFFTTAYFDPNMAHMNEILNPPDFLVGELANLSGQAADP 363
>gi|53729097|ref|ZP_00134200.2| COG3008: Paraquat-inducible protein B [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|126208685|ref|YP_001053910.1| hypothetical protein APL_1217 [Actinobacillus pleuropneumoniae L20]
gi|190150537|ref|YP_001969062.1| hypothetical protein APP7_1268 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263882|ref|ZP_07545486.1| hypothetical protein appser13_12910 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|126097477|gb|ABN74305.1| hypothetical protein APL_1217 [Actinobacillus pleuropneumoniae
serovar 5b str. L20]
gi|189915668|gb|ACE61920.1| hypothetical protein APP7_1268 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306870747|gb|EFN02487.1| hypothetical protein appser13_12910 [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 888
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 35/118 (29%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 761 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESKYQHLVRNNTEF 819
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ I+ +S + + E + + P + + +
Sbjct: 820 WAASGYTMDISLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKSNRHFLLQRKIPQ 877
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 22 FWLLPIVAFVIGGLLF--FQILKEQGEMITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ ++ +A + P+ L T +
Sbjct: 79 YFVED-LKKVEVQAEVNPEAKSVLREQTKFWL 109
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + ++ +SV F +PVG I + +I
Sbjct: 165 ISDDLGSITVGASVYFRKVPVGSIADYRFTADQ-KKVEIDVVIDKKY 210
>gi|226361221|ref|YP_002778999.1| Mce family protein [Rhodococcus opacus B4]
gi|226239706|dbj|BAH50054.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 335
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 23/113 (20%), Positives = 38/113 (33%), Gaps = 8/113 (7%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYW----LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
S+ +G VS + + + L G ++ + SV L + V
Sbjct: 4 SRRTRQILGAASVSAVVLTVPACSLGPDDLPSVRGGVGDTYDLSLEF-ASVMNLPAGADV 62
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+G+ VG + L + A I T + A +R L G TY
Sbjct: 63 VMDGLRVGEVRSLQVSGST---VTVSAGIGSGTRIPADARAIVRQDTLLGDTY 112
>gi|307250467|ref|ZP_07532413.1| hypothetical protein appser4_12470 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
gi|306857489|gb|EFM89599.1| hypothetical protein appser4_12470 [Actinobacillus pleuropneumoniae
serovar 4 str. M62]
Length = 888
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 35/118 (29%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 761 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESKYQHLVRNNTEF 819
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ I+ +S + + E + + P + + +
Sbjct: 820 WAASGYTMDISLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKSNRHFLLQRKIPQ 877
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 22 FWLLPIVAFVIGGLLF--FQILKEQGEMITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ ++ +A + P+ L T +
Sbjct: 79 YFVED-LKKVEVQAEVNPEAKSVLREQTKFWL 109
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + ++ +SV F +PVG I + +I
Sbjct: 165 ISDDLGSITVGASVYFRKVPVGSIADYRFTADQ-KKVEIDVVIDKKY 210
>gi|152986067|ref|YP_001350725.1| hypothetical protein PSPA7_5396 [Pseudomonas aeruginosa PA7]
gi|150961225|gb|ABR83250.1| hypothetical protein PSPA7_5396 [Pseudomonas aeruginosa PA7]
Length = 768
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGI 63
+ ++++ + + L + + +D ++ +R S DG+ + + V + GI
Sbjct: 13 SNWSAIWVLPLVALAIGAWLAW-----RAFDQAGVDIQVRF-ESGDGIQANKTEVLYKGI 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
VG++ L + ++ +A I+ + L T +
Sbjct: 67 SVGKVTDLHVSKDIKG-VVATIEIKKEAQEYLSKDTRFWL 105
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQG 105
+ DGL + +RF G+ +G+I + L+ + A+ + T +
Sbjct: 524 DNADGLHEGTPIRFKGLDIGKIESVELNPDLSGVLMKARLTSAGERVARSGTRFWVVRPA 583
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + L TL ++ +R
Sbjct: 584 LGLLRTENLGTLVSGPYIEALPSSTPGERQARFQ 617
Score = 41.8 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 16/135 (11%), Positives = 29/135 (21%), Gaps = 3/135 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L S V + I VG++ L + K I P + T +
Sbjct: 169 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAYADLVRKHTRFWNASGISISG 227
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ T+ + +P + R K+
Sbjct: 228 GLSGFKVHSESLLTLVAGGIAFSTPENRADSPPTDPSKPFRLYDDYDAAQAGLRVKLKMN 287
Query: 170 ENIEKPLTTTIANIE 184
+ T
Sbjct: 288 DVSGIDPGRTPVMFN 302
Score = 39.9 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 6/92 (6%), Positives = 24/92 (26%), Gaps = 1/92 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 398 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 457
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + +T+ +
Sbjct: 458 SSGITLTGNLSGVQVKSESLQTLITGGISFDT 489
>gi|289645125|ref|ZP_06477149.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
gi|289505065|gb|EFD26140.1| Mammalian cell entry related domain protein [Frankia symbiont of
Datisca glomerata]
Length = 155
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ SV + VR G+ VGRI + +++ + L A
Sbjct: 38 VAYFRSVKNVYVHDKVRIRGVVVGRIDAIVPEKD---RVRVEFSYDGRYSLPADVRA 91
>gi|238755795|ref|ZP_04617126.1| hypothetical protein yruck0001_12110 [Yersinia ruckeri ATCC 29473]
gi|238705953|gb|EEP98339.1| hypothetical protein yruck0001_12110 [Yersinia ruckeri ATCC 29473]
Length = 845
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ AEV I S G+ + +R+ G+ VG + + L ++ + A I+
Sbjct: 8 YTNWQDRGAEVTIDF-QSAAGIVAGRTPIRYQGVEVGTVQSISLSKD-LRSIVVTASIKS 65
Query: 90 DTP--LYPSTTATIRTQ 104
D L T + T
Sbjct: 66 DLEDSLREGTQFWLVTP 82
Score = 38.8 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 10/115 (8%), Positives = 23/115 (20%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + + F G+ VG + G L I + ++ + +
Sbjct: 724 AGSLQVGTPLLFRGLEVGTVTGFNLGAMSDR-VQVSLRISKKYQQLVRQNSVFWLASGYN 782
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P + K +
Sbjct: 783 LQFGLTGGVVKSGTFQQFIRGGIAFATPPTTPLAPKAVVNQHFLLHAEEPKDWRN 837
>gi|213029072|ref|ZP_03343519.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 137
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 11/69 (15%), Positives = 21/69 (30%), Gaps = 7/69 (10%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-------EYPNHS 81
S + + ++ SV GL + + F GI +G + +
Sbjct: 56 SIQDSLYTDHIDYLMFFKDSVRGLQPGAPLEFRGIRLGTVSKVPFFASNMRQVFNDDYRI 115
Query: 82 LAKALIRPD 90
I P+
Sbjct: 116 PVLVRIEPE 124
>gi|307246134|ref|ZP_07528216.1| hypothetical protein appser1_13390 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|307255116|ref|ZP_07536934.1| hypothetical protein appser9_13520 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|307259553|ref|ZP_07541278.1| hypothetical protein appser11_13520 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853069|gb|EFM85292.1| hypothetical protein appser1_13390 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|306861989|gb|EFM93965.1| hypothetical protein appser9_13520 [Actinobacillus pleuropneumoniae
serovar 9 str. CVJ13261]
gi|306866489|gb|EFM98352.1| hypothetical protein appser11_13520 [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 888
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 761 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESKYQHLVRNNTEF 819
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ I+ +S + + E + + P + +
Sbjct: 820 WAASGYTMDISLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKPNRHFLLQRKIPQ 877
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 22 FWLLPIVAFVIGGLLF--FQILKEQGEMITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ ++ +A + P+ L T +
Sbjct: 79 YFVED-LKKVEVQAEVNPEAKSVLREQTKFWL 109
Score = 38.0 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + ++ +SV F +PVG I + +I
Sbjct: 165 ISDDLGSITVGASVYFRKVPVGSIADYRFTADQ-KKVEIDVVIDKKY 210
>gi|303252927|ref|ZP_07339083.1| hypothetical protein APP2_1878 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|307248237|ref|ZP_07530264.1| hypothetical protein appser2_12170 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
gi|302648185|gb|EFL78385.1| hypothetical protein APP2_1878 [Actinobacillus pleuropneumoniae
serovar 2 str. 4226]
gi|306855254|gb|EFM87430.1| hypothetical protein appser2_12170 [Actinobacillus pleuropneumoniae
serovar 2 str. S1536]
Length = 888
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 761 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESKYQHLVRNNTEF 819
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ I+ +S + + E + + P + +
Sbjct: 820 WAASGYTMDISLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKPNRHFLLQRKIPQ 877
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 22 FWLLPIVAFVIGGLLF--FQILKEQGEMITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ ++ +A + P+ L T +
Sbjct: 79 YFVED-LKKVEVQAEVNPEAKAVLREQTKFWL 109
Score = 38.0 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + ++ +SV F +PVG I + +I
Sbjct: 165 ISDDLGSITVGASVYFRKVPVGSIADYRFTADQ-KKVEIDVVIDKKY 210
>gi|307261693|ref|ZP_07543359.1| hypothetical protein appser12_12520 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306868511|gb|EFN00322.1| hypothetical protein appser12_12520 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 888
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 761 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESKYQHLVRNNTEF 819
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ I+ +S + + E + + P + +
Sbjct: 820 WAASGYTMDISLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKPNRHFLLQRKIPQ 877
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 22 FWLLPIVAFVIGGLLF--FQILKEQGEMITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ ++ +A + P+ L T +
Sbjct: 79 YFVED-LKKVEVQAEVNPEAKSVLREQTKFWL 109
Score = 38.0 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + ++ +SV F +PVG I + +I
Sbjct: 165 ISDDLGSITVGASVYFRKVPVGSIADYRFTTDQ-KKVEIDVVIDKKY 210
>gi|307252850|ref|ZP_07534739.1| hypothetical protein appser6_13620 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|306859639|gb|EFM91663.1| hypothetical protein appser6_13620 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 888
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 761 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESKYQHLVRNNTEF 819
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ I+ +S + + E + + P + +
Sbjct: 820 WAASGYTMDISLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKPNRHFLLQRKIPQ 877
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 22 FWLLPIVAFVIGGLLF--FQILKEQGEMITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ ++ +A + P+ L T +
Sbjct: 79 YFVED-LKKVEVQAEVNPEAKSVLREQTKFWL 109
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + ++ +SV F +PVG I + +I
Sbjct: 165 ISDDLGSITVGASVYFRKVPVGSIADYRFTADQ-KKVEIDVVIDKKY 210
>gi|222872068|gb|EEF09199.1| predicted protein [Populus trichocarpa]
Length = 570
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 5/79 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + L + GP V R S DGL+ ++VR+ + +G + + L
Sbjct: 432 LIPIVAAVVGVSLLINTLASRGPEINVTFR---SADGLTPGKTAVRYKDVDIGLVKSVRL 488
Query: 74 DQEYPNHSLAKALIRPDTP 92
+ +H +A + D
Sbjct: 489 ASDR-SHVIASIELTKDAE 506
>gi|183984951|ref|YP_001853242.1| MCE family lipoprotein LprN [Mycobacterium marinum M]
gi|183178277|gb|ACC43387.1| MCE-family lipoprotein LprN [Mycobacterium marinum M]
Length = 383
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 42/377 (11%), Positives = 107/377 (28%), Gaps = 17/377 (4%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLS-------RSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
+ V + + + G V + +P L +S V
Sbjct: 2 SRIWIRSSVFVAFSALLAGCQYGGLNSLPMPGTAGHGGGAYSVTVEMPDVAT-LPQNSPV 60
Query: 59 RFNGIPVGRIVGLFLD--QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
+ + VG + G+ + ++ K + + L + TA + L G +IEL+
Sbjct: 61 MVDEVTVGSVSGINAVQRPDGSFYAAVKLALDKNVVLPANATAKVSQTSLLGSLHIELAA 120
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFIS-NAENTSKKISDSSRHIQKIIENIEKP 175
+ R + +P+ F + + ++ + +
Sbjct: 121 PTDKPAEGRLADGSRIPESHTGRSPTTEEVFSALGVVVNKGNVGALEDITDEVYQAVAGR 180
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + ++ + A +D ++ S +
Sbjct: 181 QGQFVDLVPRLAELTAGLNKQVDDIIGAVDGLNRFSAILARDKDNLGRALDTLPDALRVL 240
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ I+E + +S+ + T D E + V + ++ DF S ++
Sbjct: 241 NKNRGNIVEAFSSLKRLAMVTSNVLSKTKVDFAEDLKGLYSVVKALNDNRKDFVSSLQLL 300
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
T F + ++ + + I T+ + + E+++
Sbjct: 301 LTFPF-----PNFGIKQAVRGDYLNVFTTFDLTLRRIGETFFTTAYFDPNMAHMDEIVNP 355
Query: 356 INNISA-LKENNSLFKD 371
N + + + D
Sbjct: 356 PNFLLGEMANLSGQAAD 372
>gi|113461211|ref|YP_719280.1| hypothetical protein HS_1068 [Haemophilus somnus 129PT]
gi|112823254|gb|ABI25343.1| conserved hypothetical protein [Haemophilus somnus 129PT]
Length = 881
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 34/114 (29%), Gaps = 3/114 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
II +S S V + GI VG I L L+Q L LI + +T
Sbjct: 753 IILEATDATNISIGSPVMYRGIEVGTISKLELNQLGDR-VLVHLLIAKKYQHFVRQNTEF 811
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
I + I LS + + + + + P +
Sbjct: 812 WISSGYGVEIGLSGLSINTGTMQQLLKGGISFSTPSSKVIQPQAKANQRFLLQE 865
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
+VI I L+ ++R+ G+P+G I + L +++ + A
Sbjct: 635 KSAEQVITFIADDATNLTKGMALRYMGLPIGEIEQINLTEDHKIEATALI 684
Score = 38.0 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 30/105 (28%), Gaps = 12/105 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + GL + +R+ G
Sbjct: 25 RISPFWLLPFIALCICTLLFF-------QIIKEQGESIKITFV-NGAGLVAGKTQIRYQG 76
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ +G + + + A I P+ L +T +
Sbjct: 77 LQIGVVKKVNFT-DDLKKVEVLANIYPEAKSILKENTKFWLVQPS 120
>gi|307257270|ref|ZP_07539040.1| hypothetical protein appser10_12680 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306864120|gb|EFM96033.1| hypothetical protein appser10_12680 [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 889
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 35/118 (29%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 762 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESKYQHLVRNNTEF 820
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ I+ +S + + E + + P + + +
Sbjct: 821 WAASGYTMDISLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKSNRHFLLQRKIPQ 878
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 22 FWLLPIVAFVIGGLLF--FQILKEQGEMITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ ++ +A + P+ L T +
Sbjct: 79 YFVED-LKKVEVQAEVNPEAKSVLREQTKFWL 109
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + ++ +SV F +PVG I + +I
Sbjct: 165 ISDDLGSITVGASVYFRKVPVGSIADYRFTADQ-KKVEIDVVIDKKY 210
>gi|15610631|ref|NP_218012.1| MCE-family lipoprotein LprN [Mycobacterium tuberculosis H37Rv]
gi|15843107|ref|NP_338144.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31794671|ref|NP_857164.1| MCE-family lipoprotein LprN [Mycobacterium bovis AF2122/97]
gi|121639414|ref|YP_979638.1| mce family lipoprotein LprN [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663359|ref|YP_001284882.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis H37Ra]
gi|148824702|ref|YP_001289456.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis F11]
gi|167967136|ref|ZP_02549413.1| MCE-family lipoprotein lprN (MCE-family lipoprotein mce4e)
[Mycobacterium tuberculosis H37Ra]
gi|215405536|ref|ZP_03417717.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis 02_1987]
gi|215413408|ref|ZP_03422092.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis 94_M4241A]
gi|215429001|ref|ZP_03426920.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis T92]
gi|215432463|ref|ZP_03430382.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis EAS054]
gi|215447828|ref|ZP_03434580.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis T85]
gi|218755272|ref|ZP_03534068.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis GM 1503]
gi|219559562|ref|ZP_03538638.1| MCE family lipoprotein LprN [Mycobacterium tuberculosis T17]
gi|224991910|ref|YP_002646599.1| putative MCE-family lipoprotein [Mycobacterium bovis BCG str. Tokyo
172]
gi|253800537|ref|YP_003033538.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis KZN 1435]
gi|254234081|ref|ZP_04927406.1| MCE-family lipoprotein lprN (MCE-family lipoprotein mce4e)
[Mycobacterium tuberculosis C]
gi|254366841|ref|ZP_04982882.1| MCE-family lipoprotein lprN (MCE-family lipoprotein mce4e)
[Mycobacterium tuberculosis str. Haarlem]
gi|254552597|ref|ZP_05143044.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260188547|ref|ZP_05766021.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis CPHL_A]
gi|260202674|ref|ZP_05770165.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis T46]
gi|260206862|ref|ZP_05774353.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis K85]
gi|289445092|ref|ZP_06434836.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis T46]
gi|289449197|ref|ZP_06438941.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis CPHL_A]
gi|289555761|ref|ZP_06444971.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis KZN 605]
gi|289571728|ref|ZP_06451955.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis T17]
gi|289576229|ref|ZP_06456456.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis K85]
gi|289747331|ref|ZP_06506709.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289752216|ref|ZP_06511594.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis T92]
gi|289755625|ref|ZP_06515003.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289759654|ref|ZP_06519032.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289763675|ref|ZP_06523053.1| MCE-family lipoprotein lprN (MCE-family lipoprotein mce4e)
[Mycobacterium tuberculosis GM 1503]
gi|294995735|ref|ZP_06801426.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis 210]
gi|297636151|ref|ZP_06953931.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis KZN 4207]
gi|297733151|ref|ZP_06962269.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis KZN R506]
gi|298526975|ref|ZP_07014384.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|306777845|ref|ZP_07416182.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu001]
gi|306782575|ref|ZP_07420912.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu002]
gi|306786394|ref|ZP_07424716.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu003]
gi|306790763|ref|ZP_07429085.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu004]
gi|306795293|ref|ZP_07433595.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu005]
gi|306799481|ref|ZP_07437783.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu006]
gi|306805327|ref|ZP_07441995.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu008]
gi|306809513|ref|ZP_07446181.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu007]
gi|306969620|ref|ZP_07482281.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu009]
gi|306973963|ref|ZP_07486624.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu010]
gi|307081671|ref|ZP_07490841.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu011]
gi|307086279|ref|ZP_07495392.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu012]
gi|313660482|ref|ZP_07817362.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis KZN V2475]
gi|2924432|emb|CAA17732.1| POSSIBLE MCE-FAMILY LIPOPROTEIN LPRN (MCE-FAMILY LIPOPROTEIN MCE4E)
[Mycobacterium tuberculosis H37Rv]
gi|13883453|gb|AAK47958.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|31620268|emb|CAD95711.1| POSSIBLE MCE-FAMILY LIPOPROTEIN LPRN (MCE-FAMILY LIPOPROTEIN MCE4E)
[Mycobacterium bovis AF2122/97]
gi|121495062|emb|CAL73548.1| Possible mce-family lipoprotein lprN [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124599610|gb|EAY58714.1| MCE-family lipoprotein lprN (MCE-family lipoprotein mce4e)
[Mycobacterium tuberculosis C]
gi|134152350|gb|EBA44395.1| MCE-family lipoprotein lprN (MCE-family lipoprotein mce4e)
[Mycobacterium tuberculosis str. Haarlem]
gi|148507511|gb|ABQ75320.1| MCE-family lipoprotein LprN [Mycobacterium tuberculosis H37Ra]
gi|148723229|gb|ABR07854.1| MCE-family lipoprotein lprN (MCE-family lipoprotein mce4e)
[Mycobacterium tuberculosis F11]
gi|224775025|dbj|BAH27831.1| putative MCE-family lipoprotein [Mycobacterium bovis BCG str. Tokyo
172]
gi|253322040|gb|ACT26643.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis KZN 1435]
gi|289418011|gb|EFD15251.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis T46]
gi|289422155|gb|EFD19356.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis CPHL_A]
gi|289440393|gb|EFD22886.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis KZN 605]
gi|289540660|gb|EFD45238.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis K85]
gi|289545482|gb|EFD49130.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis T17]
gi|289687859|gb|EFD55347.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289692803|gb|EFD60232.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis T92]
gi|289696212|gb|EFD63641.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289711181|gb|EFD75197.1| MCE-family lipoprotein lprN (MCE-family lipoprotein mce4e)
[Mycobacterium tuberculosis GM 1503]
gi|289715218|gb|EFD79230.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|298496769|gb|EFI32063.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|308213825|gb|EFO73224.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu001]
gi|308324780|gb|EFP13631.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu002]
gi|308329030|gb|EFP17881.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu003]
gi|308332869|gb|EFP21720.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu004]
gi|308336452|gb|EFP25303.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu005]
gi|308340330|gb|EFP29181.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu006]
gi|308344185|gb|EFP33036.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu007]
gi|308348115|gb|EFP36966.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu008]
gi|308352879|gb|EFP41730.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu009]
gi|308356692|gb|EFP45543.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu010]
gi|308360646|gb|EFP49497.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu011]
gi|308364263|gb|EFP53114.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis SUMu012]
gi|323717837|gb|EGB27028.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis CDC1551A]
gi|326905337|gb|EGE52270.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis W-148]
gi|328460268|gb|AEB05691.1| MCE-family lipoprotein mce4E [Mycobacterium tuberculosis KZN 4207]
gi|328864240|gb|AEB53203.1| putative MCE family lipoprotein [Mycobacterium tuberculosis]
Length = 384
Score = 49.5 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 41/379 (10%), Positives = 105/379 (27%), Gaps = 18/379 (4%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQY-------DGPMAEVIIRIPGSVDGLSTDSSV 58
+ +++ N G A + V L +S V
Sbjct: 2 NRIWLRAIILTASSALLAGC-QFGGLNSLPLPGTAGHGEGAYSVTVEMADVATLPQNSPV 60
Query: 59 RFNGIPVGRIVGLFLD--QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
+ + VG + G+ + ++ K + + L + A + L G ++EL+
Sbjct: 61 MVDDVTVGSVAGIVAVQRPDGSFYAAVKLDLDKNVLLPANAVAKVSQTSLLGSLHVELAP 120
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFIS-NAENTSKKISDSSRHIQKIIENIEKP 175
T + R A P+ F + + I + + +
Sbjct: 121 PTDRPPTGRLVDGSRITEANTDRFPTTEEVFSALGVVVNKGNVGALEEIIDETHQAVAGR 180
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + ++ + A + ++ S +
Sbjct: 181 QAQFVNLVPRLAELTAGLNRQVHDIIDALDGLNRVSAILARDKDNLGRALDTLPDAVRVL 240
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q + I++ + +S + T D E + + + ++ DF + ++
Sbjct: 241 NQNRDHIVDAFAALKRLTMVTSHVLAETKVDFGEDLKDLYSIVKALNDDRKDFVTSLQLL 300
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
T F + ++ + + I T+ + + E+++
Sbjct: 301 LTFPF-----PNFGIKQAVRGDYLNVFTTFDLTLRRIGETFFTTAYFDPNMAHMDEILNP 355
Query: 356 INNISALKENNSLFKDAQR 374
+ + E +L A
Sbjct: 356 PDFLIG--ELANLSGQAAD 372
>gi|254442089|ref|ZP_05055565.1| mce related protein [Verrucomicrobiae bacterium DG1235]
gi|198256397|gb|EDY80705.1| mce related protein [Verrucomicrobiae bacterium DG1235]
Length = 284
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 37/130 (28%), Gaps = 9/130 (6%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP--DTPLYP 95
++R+ + L S V + + VG + L + + L K LI D +
Sbjct: 152 GYHYLLRV-DQLGSLKPGSPVLYRQVKVGEVTKTKLAPDATS-VLVKILINSPYDKLVRS 209
Query: 96 STTATIRTQ-----GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
T + GL G S I + + + A + +
Sbjct: 210 DTVFWNASGIDMKVGLLGAKIQTDSLESILAGGIMFATPDEDDQLAGLAPANTEFPLHTE 269
Query: 151 AENTSKKISD 160
+ +
Sbjct: 270 LDEDWLEWKP 279
Score = 43.4 bits (99), Expect = 0.069, Method: Composition-based stats.
Identities = 13/76 (17%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGLFLDQE 76
+ F ++ + I S DGL +V ++ G+ VG + L L +
Sbjct: 22 IALLFAGYLIF---HELQSRGPTITITF-ESGDGLVAGRTVLQYKGMAVGTVDTLALSPD 77
Query: 77 YPNHSLAKALIRPDTP 92
+H + ++
Sbjct: 78 -LSHVEVQVALQKSAK 92
>gi|326382396|ref|ZP_08204088.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199126|gb|EGD56308.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 349
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 39/322 (12%), Positives = 91/322 (28%), Gaps = 4/322 (1%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + G+ ++V G VG +VG+ E + I P
Sbjct: 27 RTASDDTRALCAEFTDASGVFKGNAVAMLGKKVGSVVGVH-QNEGQSGVRIDMRIDKSVP 85
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
L AT+ + + IE S + S ISN
Sbjct: 86 LSADVGATLVSTSIVTERQIEFSKPYSGGARYETNQCIPLSKTRTPLGVSQTLDSISNLS 145
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ D+ R+ ++++++ ++ ++ ++ + I+
Sbjct: 146 EDL--VKDNGRNTDAVLQSLKLVARNLEGTQGDVAGIIKDSATLINDPAKRDGQIRRIVG 203
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ T + + + +N I+ Q + V +
Sbjct: 204 NLATLTGVATENDKELTALFDNFVGAINVIVAFGQTFGAAVEYAGTFVPILSRFASDFGP 263
Query: 273 TFQEVGQKIDHLLSDFSSKMKS-KETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+G L++ + +A ++ + +S + A R +
Sbjct: 264 PIFAIGDAAVPLIAGMGEQPDMVAAVAARTADLIVKHPDAKSIVRAFAVSLPLRSLVSGC 323
Query: 332 INTIENITSNLNDSSQKFAELM 353
+ N D+S+ A +M
Sbjct: 324 AASAANGVCGPGDASRTIAGMM 345
>gi|239945575|ref|ZP_04697512.1| putative Mce family protein [Streptomyces roseosporus NRRL 15998]
gi|239992042|ref|ZP_04712706.1| putative Mce family protein [Streptomyces roseosporus NRRL 11379]
Length = 431
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 16/127 (12%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVD--------G--LSTDSSVRFNGIPVGRIVG 70
+ L ++ G + T++ V+ G+ +G++
Sbjct: 13 LAGVAFLLVPVVLVWVSVSVYEKDFTDDATVTVRTGSVGNEMHTNADVKLRGVVIGQVRS 72
Query: 71 LFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQI 127
+ D + + I D + TA + L G ++ + T+
Sbjct: 73 IATDGDG---ARLTLAIDRDKLGQVPADVTAQMLPTTLFGARFVALVPPRIPAATTLRAG 129
Query: 128 ATERNQR 134
A R
Sbjct: 130 AVIPQDR 136
>gi|223041734|ref|ZP_03611928.1| hypothetical protein AM202_0341 [Actinobacillus minor 202]
gi|223017472|gb|EEF15889.1| hypothetical protein AM202_0341 [Actinobacillus minor 202]
Length = 897
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 35/123 (28%), Gaps = 4/123 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LY 94
+I+ G+ ++ V + G+ VG + L L + L I +
Sbjct: 766 NGYPIIVE-TSDARGIEPEAPVLYRGMQVGIVKKLNLSELGDR-VLIHLSIENKYQHLVR 823
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
+T + ++ +S + + E + + P +
Sbjct: 824 NNTEFWAASGYTMDVSLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKPNRHFLLQRK 883
Query: 155 SKK 157
+
Sbjct: 884 IPQ 886
Score = 44.5 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 16/56 (28%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I I L +R+ G+ VG++ L L A +
Sbjct: 651 TAGYTYITLIAKDASKLFKGMDIRYMGLTVGKVEKLELQ-NAKKQIKVTAYLDGQY 705
Score = 41.1 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + + IR DG++ +++R+ G+ +G + +
Sbjct: 31 FWLLPIVAFAIGCLLF--FQILKEQGETITIRFNE-GDGITAGKTAIRYQGLQIGLVKKV 87
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ + +A I P+ L T +
Sbjct: 88 YFV-DNLKKVQVEAEINPEAKSVLKEGTIFWV 118
>gi|215427325|ref|ZP_03425244.1| MCE-family protein mce3A [Mycobacterium tuberculosis T92]
Length = 146
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNG 62
++T + LF V + ++ + V + + GL + + V G
Sbjct: 4 AWWTLI-LFAVIGVAVLVTAVSFTGSLRS------TVPVTLTADRSGLVMDSGAKVMMRG 56
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ VGR+ + + N + + I P+
Sbjct: 57 VQVGRVAQIGRIEWAQNGASLRLEIDPEV 85
>gi|165976637|ref|YP_001652230.1| hypothetical protein APJL_1230 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|303250700|ref|ZP_07336897.1| hypothetical protein APP6_0288 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
gi|165876738|gb|ABY69786.1| hypothetical protein APJL_1230 [Actinobacillus pleuropneumoniae
serovar 3 str. JL03]
gi|302650688|gb|EFL80847.1| hypothetical protein APP6_0288 [Actinobacillus pleuropneumoniae
serovar 6 str. Femo]
Length = 842
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 715 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESKYQHLVRNNTEF 773
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ I+ +S + + E + + P + +
Sbjct: 774 WAASGYTMDISLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKPNRHFLLQRKIPQ 831
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + ++ +SV F +PVG I + +I
Sbjct: 119 ISDDLGSITVGASVYFRKVPVGSIADYRFTADQ-KKVEIDVVIDKKY 164
>gi|118619248|ref|YP_907580.1| MCE family lipoprotein LprN [Mycobacterium ulcerans Agy99]
gi|118571358|gb|ABL06109.1| MCE-family lipoprotein LprN [Mycobacterium ulcerans Agy99]
Length = 383
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 42/377 (11%), Positives = 107/377 (28%), Gaps = 17/377 (4%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLS-------RSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
+ V + + + G V + +P L +S V
Sbjct: 2 SRIWIRSSVFVAFSALLAGCQYGGLNSLPMPGTAGHGGGAYSVTVEMPDVAT-LPQNSPV 60
Query: 59 RFNGIPVGRIVGLFLD--QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
+ + VG + G+ + ++ K + + L + TA + L G +IEL+
Sbjct: 61 MVDEVTVGSVSGINAVQRPDGSFYAAVKLALDKNVVLPANATAKVSQTSLLGSLHIELAA 120
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFIS-NAENTSKKISDSSRHIQKIIENIEKP 175
+ R + +P+ F + + ++ + +
Sbjct: 121 PTDKPAEGRLADGSRIPESHTGRSPTTEEVFSALGVVVNKGNVGALEDITDEVYQAVAGR 180
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + ++ + A +D ++ S +
Sbjct: 181 QGQFVDLVPRLAELTAGLNKQVDDIIGAVDGLNRFSAILARDKDNLGRALDTLPDALRVL 240
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ I+E + +S+ + T D E + V + ++ DF S ++
Sbjct: 241 NKNRGNIVEAFSSLKGLAMVTSNVLSKTKVDFAEDLKGLYSVVKALNDNRKDFVSSLQLL 300
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
T F + ++ + + I T+ + + E+++
Sbjct: 301 LTFPF-----PNFGIKQAVRGDYLNVFTTFDLTLRRIGETFFTTAYFDPNMAHMDEIVNP 355
Query: 356 INNISA-LKENNSLFKD 371
N + + + D
Sbjct: 356 PNFLLGEMANLSGQAAD 372
>gi|294636439|ref|ZP_06714819.1| mce related protein [Edwardsiella tarda ATCC 23685]
gi|291090298|gb|EFE22859.1| mce related protein [Edwardsiella tarda ATCC 23685]
Length = 243
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 13/122 (10%), Positives = 25/122 (20%), Gaps = 3/122 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
I+ L + V + GI VG + GL L I + + ++
Sbjct: 115 IVVDTPDAGALQVGTPVLYRGIEVGTVTGLTLGSLGDR-VQVALRIGREYQRLVRSNSVF 173
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+ + + PS +
Sbjct: 174 WQASGYSLAFGLTGGVVKSGTFQQFIRGGIAFATPPSTPLAPSAAAGTHFLLHDAPPSGW 233
Query: 160 DS 161
Sbjct: 234 QD 235
>gi|317508284|ref|ZP_07965964.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253459|gb|EFV12849.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 348
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 23/106 (21%), Positives = 35/106 (33%), Gaps = 8/106 (7%)
Query: 12 LFVVSILFFSFFSIY------WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
L VV L S + + V SV L + V NG+ V
Sbjct: 9 LVVVLALSLGACSALEALDPAKIPVRGNHIEGGYYVKAVFK-SVLNLPDRAKVVSNGVRV 67
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
G + G+ LD E H + + + + +R L G T+
Sbjct: 68 GILEGVSLDPET-GHVTVTMHLSEGAQIPQNASIQLRQSTLFGDTF 112
>gi|120401166|ref|YP_950995.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119953984|gb|ABM10989.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 381
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 37/105 (35%), Gaps = 5/105 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + +++P ++ L+ +S VR + VGR+ + L + +
Sbjct: 35 LPGGPGSGSERTTIYVQMPDTLA-LNVNSRVRVADVYVGRVRAIEL---KNWIATLTLDL 90
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELS-TLRKEKKTIFQIATER 131
P L +T A I L G +++L + +
Sbjct: 91 EPSVQLPVNTLARIGQTSLLGSQHVQLDLPPDPSPQKLKSGDVIP 135
>gi|170717811|ref|YP_001784873.1| hypothetical protein HSM_1553 [Haemophilus somnus 2336]
gi|168825940|gb|ACA31311.1| Mammalian cell entry related domain protein [Haemophilus somnus
2336]
Length = 881
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 34/114 (29%), Gaps = 3/114 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
II +S S V + GI VG I L L+Q L LI + +T
Sbjct: 753 IILEATDATNISIGSPVMYRGIEVGTISKLELNQLGDR-VLVHLLIAKKYQHFVRQNTEF 811
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
I + I LS + + + + + P +
Sbjct: 812 WISSGYGVEIGLSGLSINTGTMQQLLKGGISFSTPSSKVIQPQAKANQRFLLQE 865
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 30/105 (28%), Gaps = 12/105 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + GL + +R+ G
Sbjct: 25 RISPFWLLPFIALCICTLLFF-------QIIKEQGESIKITFV-NGAGLVAGKTQIRYQG 76
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ +G + + + A I P+ L +T +
Sbjct: 77 LQIGVVKKVNFT-DDLKKVEVLANIYPEAKSILKENTKFWLVQPS 120
Score = 36.8 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 22/50 (44%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
++I I L+ ++R+ G+ +G I + L +++ + A
Sbjct: 635 KSAGQIITFIADDATNLTKGMALRYMGLSIGEIEQINLTEDHKIEATALI 684
>gi|261493277|ref|ZP_05989804.1| PqiB protein [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261311127|gb|EEY12303.1| PqiB protein [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 886
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
II + +G+ ++ V + G+ VG + L L + L I + +T
Sbjct: 759 IIVETTNANGIQPEAPVLYRGMQVGIVSHLSLSEVNDR-VLIHLKINSKYQHLVRTNTQF 817
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ ++ +S + E + P +
Sbjct: 818 WQASGYTMDVSLQGVSMNSGTMSQLLNGGIEFSTPYTKVVKPQAQPNRRFFLQRKLPD 875
Score = 43.8 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 16/117 (13%)
Query: 1 MESKNYYT---------SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG 51
ME + + F + + + IR DG
Sbjct: 1 MEENTHTVVDAQIRQPRKISPFWLLPIVAFIIGALLF--FQILKEQGETITIRFSK-GDG 57
Query: 52 LSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
++ +++R+ G+ +G++ ++ + +A I P+ L T +
Sbjct: 58 ITAGKTAIRYQGLQIGQVKRVYFV-DNLKEVEVQAEINPEAKSILRKQTKFWLVQPS 113
Score = 38.4 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ I LS +++ G+ VG+I L L A A I+
Sbjct: 640 TSGNTYLTLIAKDASKLSEGMDIKYMGLTVGQIEKLELQ-NAKKQIKATAYIQRKY 694
Score = 37.6 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIR 102
S+ G+S S V + VG ++ + + I+P+ L + I
Sbjct: 538 DSLSGISEGSLVLYRDFQVGEVLKITP---KQQKFEVELFIQPNYRHLLTEKSRFWIE 592
>gi|261496480|ref|ZP_05992860.1| PqiB protein [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261307683|gb|EEY09006.1| PqiB protein [Mannheimia haemolytica serotype A2 str. OVINE]
Length = 888
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 15/118 (12%), Positives = 33/118 (27%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
II + +G+ ++ V + G+ VG + L L + L I + +T
Sbjct: 761 IIVETTNANGIQPEAPVLYRGMQVGIVSHLSLSEVNDR-VLIHLKINSKYQHLVRTNTQF 819
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ ++ +S + E + P +
Sbjct: 820 WQASGYTMDVSLQGVSMNSGTMSQLLNGGIEFSTPYTKVVKPQAQPNRRFFLQRKLPD 877
Score = 43.4 bits (99), Expect = 0.068, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 36/117 (30%), Gaps = 16/117 (13%)
Query: 1 MESKNYYT---------SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG 51
ME + + F + + + IR DG
Sbjct: 3 MEENTHTVVDAQIRQPRKISPFWLLPIVAFIIGALLF--FQILKEQGETITIRFSK-GDG 59
Query: 52 LSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
++ +++R+ G+ +G++ ++ + +A I P+ L T +
Sbjct: 60 ITAGKTAIRYQGLQIGQVKRVYFV-DNLKEVEVQAEINPEAKSILRKQTKFWLVQPS 115
Score = 38.0 bits (85), Expect = 2.8, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 19/56 (33%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ I LS +++ G+ VG+I L L A A I+
Sbjct: 642 TSGNTYLTLIAKDASKLSEGMDIKYMGLTVGQIEKLELQ-NAKKQIKATAYIQRKY 696
Score = 37.6 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 5/58 (8%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIR 102
S+ G+S S V + VG ++ + + I+P+ L + I
Sbjct: 540 DSLSGISEGSLVLYRDFQVGEVLKITP---KQQKFEVELFIQPNYRHLLTEKSRFWIE 594
>gi|73981721|ref|XP_857044.1| PREDICTED: similar to Laminin beta-1 chain precursor (Laminin B1
chain) isoform 2 [Canis familiaris]
Length = 1654
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 75/218 (34%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ Q +K+D D
Sbjct: 1310 QKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLQKTNATKEKVDKSNEDLR 1369
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1370 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1429
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1430 QQSAADVARAEALLEEAKRASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDIQ 1489
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1490 G-TQNLLTSIESETAASEETLLNASQRISELERNVEEL 1526
>gi|73981723|ref|XP_533089.2| PREDICTED: similar to Laminin beta-1 chain precursor (Laminin B1
chain) isoform 1 [Canis familiaris]
Length = 1655
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 75/218 (34%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ Q +K+D D
Sbjct: 1311 QKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLQKTNATKEKVDKSNEDLR 1370
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1371 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1430
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1431 QQSAADVARAEALLEEAKRASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDIQ 1490
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1491 G-TQNLLTSIESETAASEETLLNASQRISELERNVEEL 1527
>gi|289441978|ref|ZP_06431722.1| CE-family protein [Mycobacterium tuberculosis T46]
gi|289414897|gb|EFD12137.1| CE-family protein [Mycobacterium tuberculosis T46]
Length = 269
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKA 85
+ P E+ + S GL S V +NG+ +GR+ + ++++ +
Sbjct: 34 KQFRGEFTPKTELTMV--ASRAGLVMEAGSKVTYNGVEIGRVGSISEIERDGRPAAKLVL 91
Query: 86 LIRPDTP--LYPSTTATIRTQGLAGITY 111
+ P + + A I L G Y
Sbjct: 92 DVNPRYISLIPVNVVADIEAATLFGNKY 119
>gi|118465483|ref|YP_881724.1| virulence factor Mce [Mycobacterium avium 104]
gi|118166770|gb|ABK67667.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 446
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 15/95 (15%), Positives = 31/95 (32%), Gaps = 5/95 (5%)
Query: 43 IRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ + GL + V+ G+ VGR+ + P + + + TA
Sbjct: 1 MTLTADRSGLIMEPGAKVKLRGVQVGRVTSIH--SGDPVTLRLELYPEQLQYIPANVTAQ 58
Query: 101 IRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQR 134
I G Y++ + + A R++
Sbjct: 59 ITATTAFGGKYVDLQIPESPSPRRLAAGAVVRSRN 93
>gi|104783650|ref|YP_610148.1| paraquat-inducible protein B [Pseudomonas entomophila L48]
gi|95112637|emb|CAK17365.1| paraquat-inducible protein B [Pseudomonas entomophila L48]
Length = 766
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/114 (15%), Positives = 33/114 (28%), Gaps = 1/114 (0%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAK 84
+ L S ++ DGL + +RF G+ VG + + L + A+
Sbjct: 505 FRLHESQDAANRAGTLVTIRVERADGLKPGTPIRFRGLDVGSVESVDLTSDLQAVLLRAR 564
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ T + L + L TL + A +
Sbjct: 565 ITQSAERIARAGTQFWVVKPALGLVRTENLDTLVGGQYLEVLPALKDKGPQRDF 618
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 8/96 (8%), Positives = 23/96 (23%), Gaps = 1/96 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + + + + ST
Sbjct: 400 VLFADTLGSLEVGSPVMYRQVRVGSVQSYQFARNSKRILIGVHIEKEYANLVNGSTRFWN 459
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ + + +T+ +
Sbjct: 460 ASGITLTGGLSGIQVKSESLQTLMAGGIAFDTPKPD 495
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 2 ESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSV 58
+++ + ++++ + + L + + Y E+ +R + +G+ + + V
Sbjct: 8 KTRPASNWSAIWILPLIALAIGGWLAWQA-----YRDAGIEIQVRF-ETGEGIVANKTEV 61
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDT--PLYPSTTATI 101
+ G+ VG++ L LD + N +A +R + L T +
Sbjct: 62 IYKGMSVGKVTALVLDNKGDNRGVVATIEMRKEAGPHLTTGTRFWL 107
>gi|149194307|ref|ZP_01871404.1| paraquat-inducible protein B [Caminibacter mediatlanticus TB-2]
gi|149135482|gb|EDM23961.1| paraquat-inducible protein B [Caminibacter mediatlanticus TB-2]
Length = 390
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 36/115 (31%), Gaps = 14/115 (12%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIY-WLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVR 59
+ + + + + L + IY + S + I S GL S VR
Sbjct: 10 KKRETNFIIWILPIISLMVGGWLIYKYYSNLGPL------IEIYFKNS-GGLEPKKSFVR 62
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYI 112
F + VG + + L + L K + D L +T I L
Sbjct: 63 FRDVKVGVVEDIELLKNG---VLVKVRMHNDVRPFLNKTTRFWIVKPVLGINKIQ 114
>gi|116329316|ref|YP_799036.1| substrate binding protein of an ABC transporter complex [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116330079|ref|YP_799797.1| substrate binding protein of an ABC transporter complex [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|116122060|gb|ABJ80103.1| Substrate binding protein of an ABC transporter complex [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116123768|gb|ABJ75039.1| Substrate binding protein of an ABC transporter complex [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 266
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 18/130 (13%), Positives = 42/130 (32%), Gaps = 15/130 (11%)
Query: 1 ME-SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M SK+ G+ + + ++ D + I P ++G+ + VR
Sbjct: 1 MNLSKHIAILTGIIFFLGFSLGI-YVSVVEKAGTQDEYPYTMKIYYPR-LEGIHPGAPVR 58
Query: 60 FNGIPVGRIVGLF------------LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
G+ G + L L+++ ++ L+ + T +T +
Sbjct: 59 ILGVEKGIVRSLDVVSIDEVGDQKFLNKDQTKAIEIVIRLKEPVTLWDNYKITFQTNTIL 118
Query: 108 GITYIELSTL 117
I++
Sbjct: 119 SGRTIDIDPG 128
>gi|257484162|ref|ZP_05638203.1| PqiB family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 131
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 2/102 (1%)
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
E+ +N +A M + + G L S +
Sbjct: 23 MQEIAGNLNGSLDEAHKTFKLFNA-DVMPELHTVLGQSQSTMEMAGAALAEDSPV-RQQV 80
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ ++Q T + RNP+ ++ GR + V P
Sbjct: 81 NRTMDEVQRTDRSVRVLTDYISRNPEALIRGRTRQDVPSVYP 122
>gi|327481966|gb|AEA85276.1| PqiB family protein [Pseudomonas stutzeri DSM 4166]
Length = 769
Score = 49.2 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 29/358 (8%), Positives = 91/358 (25%), Gaps = 11/358 (3%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGI 63
+ ++++ + + L + + Y + + S +G+ + +SV + G+
Sbjct: 13 SSWSAIWILPLIALAIGAWLAWQA-----YSERGIHIEVVF-DSAEGIEINKTSVLYKGM 66
Query: 64 PVGRIVGLFLDQEYPNHSLA-KALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKE 120
+G + L L+ + + + D L T + + L TL
Sbjct: 67 TIGVVRDLRLEDDDRRQVVVADIEMNKDVDGYLRSGTRFWLVKPSVTLAGITGLETLVSG 126
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
A + + + + K + + +
Sbjct: 127 NYIGMSPADGEPTKRFVALAEEPPMSDSRIGLHLTLKAERLGSLNRGSPVFYRQIQVGQV 186
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
N + + + V H+ + T+ +T + +++
Sbjct: 187 KNYVLAEDDSTVEVQLYIQPEYAHLVRKHTRFWNASGVTVDAGLTGVKFRTESLASIVAG 246
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
I + + + +++ + Q + + + +
Sbjct: 247 GIAFATPAHRKDSPATDPNIPFRLYEDFDAAQAGIKAVVALQD-FDGLQAGRTPVMYNGM 305
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ A E++ + + + S L + +
Sbjct: 306 QVGLLKKLDIDSDLKGARAELSVDPLFEDYLVEDTDFWVVKPSISLGGITGLEALVKG 363
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
+ S+ L S V + + VG + ++ + I
Sbjct: 400 VLTTDSLGSLDVGSPVLYRQVRVGSVQSYQFSRDQ-QKVVVGVHIE 444
Score = 43.4 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAG 108
DGLS + +R+ G+ VG++ + L + + A+ T + L
Sbjct: 529 DGLSAGTPIRYKGLAVGQVDTVTLSDDLQSVVLRARITAAESRITRAGTQFWVVRPELGI 588
Query: 109 IT 110
+
Sbjct: 589 MR 590
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 8/50 (16%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTAT 100
+ ++V + + VG + G L Q R ++ T
Sbjct: 644 IKPGNAVTYREVKVGEVTGYELGQNADRVLIRVVIEPRYAPLVHTGTRFW 693
>gi|118472695|ref|YP_884554.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118173982|gb|ABK74878.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 390
Score = 49.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/281 (10%), Positives = 80/281 (28%), Gaps = 5/281 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + +++P ++ L+ +S VR + VGR+ + L +
Sbjct: 44 LPGGPGTESGSMTLYVQMPETLA-LNANSRVRVRDVFVGRVRKIELI---NWVPTLTVDV 99
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P L +T A I L G ++EL+ + +
Sbjct: 100 EPGIKLPKNTLAKIGQTSLLGSQHVELNPPEDPSSELLRDGDTIPLAQSSAYPTIERTLA 159
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ T I + ++ + + + T +++ T
Sbjct: 160 GISGILTGGGIPNIEVIQTEVFNILNGRADQIREFLNQLDTFTDELNQQREEITRAIDST 219
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + N D + + + + + + + + + + + ++
Sbjct: 220 NRLLNIVSQRNDTLDRVLTEFPPLIQHFAETRDLFADAVTALGRLSAAADETLSGSNANL 279
Query: 268 RETTQTFQEVGQKI-DHLLSDFSSKMKSKETSAFLENIADS 307
Q Q +++ + ++NI +
Sbjct: 280 HTNLQNLQRPLKQLGRAAPYLVGALKLILTVPFNIDNIPKA 320
>gi|170723724|ref|YP_001751412.1| hypothetical protein PputW619_4563 [Pseudomonas putida W619]
gi|169761727|gb|ACA75043.1| Mammalian cell entry related domain protein [Pseudomonas putida
W619]
Length = 766
Score = 49.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 1/114 (0%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAK 84
+ L S + +I DGL + +RF G+ VG I + L ++ A+
Sbjct: 505 FRLHDSQEAVNRAGTLITIRVDRADGLKPGTPIRFRGLDVGSIESVDLTKDLQAVLLRAR 564
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
D T + L + L TL + Q A +
Sbjct: 565 ITEAADRIARAGTQFWVVKPALGLVRTENLDTLIGGQYLEVQPAVKDKGPQRDF 618
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/106 (18%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 2 ESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSV 58
+++ + ++++ + + L + + Y E+ +R S +G+ + + V
Sbjct: 8 KTRPASNWSAIWILPLIALMIGGWLAWQA-----YRDAGVEIEVRF-ESGEGIVANKTEV 61
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDT--PLYPSTTATI 101
+ G+PVG++ L LD E N +A + D L T +
Sbjct: 62 IYKGMPVGKVKSLVLDAEGENQGVIATIEMNKDAEPHLTKGTRFWL 107
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 7/96 (7%), Positives = 24/96 (25%), Gaps = 1/96 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + + + + + S+
Sbjct: 400 VLFADTLGSLEVGSPVMYRQVKVGSVQSYQFARNSNRILIGVHIEKEYENLVNGSSRFWN 459
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ + + +T+ +
Sbjct: 460 VSGITLTGGLSGIKIKSESLQTLMAGGIAFDTPTPN 495
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 30/134 (22%), Gaps = 1/134 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ DS V + I VGR+ L ++ + + T +
Sbjct: 170 LNRDSPVFYKQIQVGRVKSYRLSEDQSTVEVKVFIEPAYASLVRKHTRFWNASGISIDAG 229
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +I +P R K+ +
Sbjct: 230 LSGVKVRSESLSSIVAGGIAFATPEYRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKLSD 289
Query: 171 NIEKPLTTTIANIE 184
T +
Sbjct: 290 YEGLQAGRTPVMYK 303
>gi|118462673|ref|YP_884167.1| Mce family protein [Mycobacterium avium 104]
gi|118163960|gb|ABK64857.1| putative Mce family protein [Mycobacterium avium 104]
Length = 308
Score = 49.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 33/245 (13%), Positives = 65/245 (26%), Gaps = 4/245 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + + E+ I +V L + V +G VG + + L NH + I
Sbjct: 4 LPQPGKSYSDGYELAIEF-ANVLNLPERAKVVQDGTTVGVVTRIEL---KSNHVDVISRI 59
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
D + + AT++ + G TY+ L ++ A E + + T
Sbjct: 60 DRDVAVPSNVHATLQQSTVLGDTYVALERPQQGADAAAAPAGENGRIPLAQTTSPPQLED 119
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
R II + + S V+A+ + +
Sbjct: 120 TIANMANFVGSGSVQRIQNTIIGINNVTPSRNAELHKISSRVVADLKDLSNNIDVVDTWL 179
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
S + + + + + Q I + V +
Sbjct: 180 NGVSGTGQVMHQNLPIYRYWFSPDGMLGFDRGTQTASYIGTVLPSIGSIYSGGFWLVPTL 239
Query: 268 RETTQ 272
Sbjct: 240 ESLAN 244
>gi|119774716|ref|YP_927456.1| virulence factor MCE-like protein related [Shewanella amazonensis
SB2B]
gi|119767216|gb|ABL99786.1| mammalian cell entry related [Shewanella amazonensis SB2B]
Length = 871
Score = 49.2 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 28/77 (36%), Gaps = 3/77 (3%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALI 87
E+ I P S G+ + V++ G+ VG++ + +D++
Sbjct: 33 GIKSIRESGVEIFIHFP-SASGIDVGKTLVKYQGLTVGKVTDIAMDEDLKGVNVTVMMDY 91
Query: 88 RPDTPLYPSTTATIRTQ 104
R L +T + +
Sbjct: 92 RSTPYLKENTQFWLVSP 108
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 10/77 (12%), Positives = 24/77 (31%), Gaps = 4/77 (5%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ + + G E+ + DGL+ S V + G+ +G++ L +
Sbjct: 262 FVLHSNEVDALGGFSLELT---TTNADGLNVGSVVVYRGLEIGKVTDTKLT-DTGVSLSI 317
Query: 84 KALIRPDTPLYPSTTAT 100
+ +
Sbjct: 318 FVNQAHGHLIGKDSRFW 334
>gi|330897902|gb|EGH29321.1| PqiB family protein [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 363
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 16/156 (10%), Positives = 40/156 (25%), Gaps = 3/156 (1%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + F I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYFRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM-ITATPSGINYFISNA 151
+ T + + + + +I + + P+ N
Sbjct: 220 ITTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDSKPADENAEFKIF 279
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
++ + ++ + I + L N
Sbjct: 280 DDQATAMAPPDGEPRYIRMRFNQSLRGLTVNAAVDF 315
Score = 40.3 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 5/91 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
E K V L + + + I + + + + +GL + + V++
Sbjct: 16 EVKRRRLRVSLIWLVPIVAAIIGI--SMALHDWMNIGPRITVSFLT-AEGLEANKTQVKY 72
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ +G + + L + H LA +
Sbjct: 73 KNVVIGMVTDISLS-DDRTHVLATIELNTSA 102
>gi|237801282|ref|ZP_04589743.1| PqiB family protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331024141|gb|EGI04198.1| PqiB family protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 365
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
DG + +R S+ GL+ +++V F G+ +G++V + LD +
Sbjct: 290 DGEPRYIRMRFNQSLRGLTVNAAVDFLGVNIGKVVSVDLDYD 331
Score = 44.9 bits (103), Expect = 0.023, Method: Composition-based stats.
Identities = 13/142 (9%), Positives = 30/142 (21%), Gaps = 1/142 (0%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPL 93
G + I + L S + + I VG++V L ++ D +
Sbjct: 161 FGEKGKRFILHTDDLGSLDIGSPIYYRRIQVGQVVAYELSKDGRGVDVQIFINAPNDQYI 220
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
T + + + + +I + +
Sbjct: 221 TTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPNWSPDAKLADENAEFKIFD 280
Query: 154 TSKKISDSSRHIQKIIENIEKP 175
+ I
Sbjct: 281 DQTTAMAPPDGEPRYIRMRFNQ 302
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 2 ESKNYYTSVGLFVVS-ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVR 59
E K V L + I+ + + + + +GL + + V+
Sbjct: 16 EVKRRRLRVSLIWLVPIIAAIIGLSMAF---HDWMNIGPRITVSFLT-AEGLEANKTQVK 71
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ + +G + + L ++ H LA +
Sbjct: 72 YKNVVIGMVTEISLSEDRT-HVLATIELNTSA 102
>gi|326333290|ref|ZP_08199537.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325948934|gb|EGD41027.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 380
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 16/96 (16%), Positives = 33/96 (34%), Gaps = 4/96 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L G V + V L +S+V+ + + +G + G+ + + + +
Sbjct: 29 LPGQPGVGGDGYTVTVTFDE-VANLVPNSAVQMDNVVIGTVAGISV---SDWQAKVRLRL 84
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ T I + L G YI++S
Sbjct: 85 MKSARVPADATFAIGQKTLLGAQYIDVSAPGPAPTP 120
>gi|12698379|gb|AAK01493.1| paraquat-inducible protein B [Pseudomonas aeruginosa]
Length = 767
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 33/94 (35%), Gaps = 1/94 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQG 105
+ DGL + +RF G+ +G+I + L+ + A+ R + T +
Sbjct: 524 DNADGLREGTPIRFKGLDIGKIESVELNPDLSGVLMRARLTSRGERVARSGTRFWVVRPA 583
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + L TL ++ +R
Sbjct: 584 LGLLRTENLGTLVSGPYIEALPSSTPGERQARFQ 617
Score = 44.5 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS-TDSSVRFNGIPVGRIVG 70
++V+ ++ + + WL YD + +R S DG+ + V + GI VG++V
Sbjct: 18 IWVLPLVALAIGA--WLG-WRAYDQAGVLIQVRFESS-DGIQAKKTEVLYKGIAVGKVVA 73
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
L + ++ +A + + L T +
Sbjct: 74 LDVSEDIKG-VVATIEMDKEARQYLSKGTRFWL 105
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L S V + I VG++ L + K I P
Sbjct: 169 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAY 207
Score = 39.9 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 6/92 (6%), Positives = 24/92 (26%), Gaps = 1/92 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 398 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 457
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + +T+ +
Sbjct: 458 SSGITLTGNLSGVQVKSESLQTLITGGISFDT 489
>gi|296391512|ref|ZP_06880987.1| mce-related protein [Pseudomonas aeruginosa PAb1]
Length = 580
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 16/100 (16%), Positives = 42/100 (42%), Gaps = 10/100 (10%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGI 63
+ ++++ + + L + + +D ++ +R S DG+ + + V + GI
Sbjct: 13 SNWSAIWVLPLVALAIGAWLAW-----RAFDQAGVDIQVRF-ESGDGIQANKTEVLYKGI 66
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
VG++ L + ++ +A I+ + L T +
Sbjct: 67 SVGKVTDLHVSKDIKG-VVATIEIKKEAQEYLSKDTRFWL 105
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ DGL + +RF G+ +G+I + L+ +
Sbjct: 524 DNADGLREGTPIRFKGLDIGKIESVELNPD 553
Score = 41.8 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 30/135 (22%), Gaps = 3/135 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L S V + I VG++ L + K I P + T +
Sbjct: 169 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAYADLVRKHTRFWNASGISISG 227
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ T+ + T +P + R K+
Sbjct: 228 GLSGFKVHSESLLTLVAGGIAFSTPENRTDSPPTDPSKPFRLYDDYDAAQAGLRVKLKMN 287
Query: 170 ENIEKPLTTTIANIE 184
+ T
Sbjct: 288 DVSGIDPGRTPVMFN 302
Score = 40.3 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 7/95 (7%), Positives = 25/95 (26%), Gaps = 1/95 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 398 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 457
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
+ + + +T+ + R
Sbjct: 458 SSGITLTGNLSGVQVKSESLQTLITGGISFDTRDP 492
>gi|330688474|ref|NP_001193448.1| laminin subunit beta-1 [Bos taurus]
Length = 1786
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1442 QKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDRSNEDLR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QQSAADIARAEILLEEAQKASKSATDVKVTADMVREALEEAEKAQIAAEKAIKQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1658
>gi|296488520|gb|DAA30633.1| laminin, beta 1 [Bos taurus]
Length = 1792
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1448 QKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDRSNEDLR 1507
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1508 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1567
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1568 QQSAADIARAEILLEEAQKASKSATDVKVTADMVREALEEAEKAQIAAEKAIKQADEDIQ 1627
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1628 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1664
>gi|120405100|ref|YP_954929.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957918|gb|ABM14923.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 445
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 26/280 (9%), Positives = 84/280 (30%), Gaps = 5/280 (1%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + +++P +V L ++S V + + VG + + + H+ + +
Sbjct: 32 LPGAVGRGPDAVSYNVQVP-NVATLESNSPVMIDDVVVGSVGKMTVQ---NWHADVEISV 87
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
+PD + + AT+ L G ++ L+ ++ + P+
Sbjct: 88 KPDVVIPANAVATVGQTSLLGSMHLALNPPLGDEPKGRLQPGSTLPLNASSTYPTTEQTL 147
Query: 148 ISNAENTS-KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
S + + + + + + + + + + ++ + Q
Sbjct: 148 ASLSTVANGGGLGQIGDIVHNMNTALSGREPEVRELLTRLDNFVGVLAEQRENIIASIQQ 207
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ + + D + +++ + ++ V + D
Sbjct: 208 LRRVAGTFANQREVIDRALKEIPPAIDVLIRERPNFTTALDRLGQFSNTATQLVNDAGDD 267
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + V + + D + + + AD
Sbjct: 268 LVKNLENLGPVLGALADIGPDLNEAVLWASAFPYGPTFAD 307
>gi|291449030|ref|ZP_06588420.1| secreted protein [Streptomyces roseosporus NRRL 15998]
gi|291351977|gb|EFE78881.1| secreted protein [Streptomyces roseosporus NRRL 15998]
Length = 419
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 16/127 (12%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVD--------G--LSTDSSVRFNGIPVGRIVG 70
+ L ++ G + T++ V+ G+ +G++
Sbjct: 1 MAGVAFLLVPVVLVWVSVSVYEKDFTDDATVTVRTGSVGNEMHTNADVKLRGVVIGQVRS 60
Query: 71 LFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQI 127
+ D + + I D + TA + L G ++ + T+
Sbjct: 61 IATDGDG---ARLTLAIDRDKLGQVPADVTAQMLPTTLFGARFVALVPPRIPAATTLRAG 117
Query: 128 ATERNQR 134
A R
Sbjct: 118 AVIPQDR 124
>gi|254230932|ref|ZP_04924259.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis C]
gi|124599991|gb|EAY59001.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis C]
Length = 423
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 13/281 (4%)
Query: 12 LFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+F++++L L + +++P ++ L+T+S VR
Sbjct: 52 VFLLAVLLAPVVLTSCTWRGIANVPLPVGRGMGPDRMTIYVQMPDTLA-LNTNSRVRVAD 110
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L + + P L + TA I L G ++EL+
Sbjct: 111 VWVGTVRDISL---RNWIATLTLELEPTVRLPANATAKIGQTSLLGTQHVELAAPPIPSP 167
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + T I + +I+ ++
Sbjct: 168 QPLKSGDTIGLKNSSAYPTVERTLASVALILTGGGIVNLDVIQTEILNILDGHAGQIREF 227
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+E ++T A + + T N D + + +
Sbjct: 228 LERLATFTAELNNQRGDLTRAIDSTNQLLTIIANRNDTLDRVLTDVPPLIEHFADTGQLF 287
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + ++ + T ++ +T Q+ Q ++++
Sbjct: 288 ADATESLGRFSEVANRALAATRPNLHQTLQSLQRPLRQLER 328
>gi|322513659|ref|ZP_08066755.1| paraquat-inducible protein B [Actinobacillus ureae ATCC 25976]
gi|322120530|gb|EFX92433.1| paraquat-inducible protein B [Actinobacillus ureae ATCC 25976]
Length = 890
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 34/118 (28%), Gaps = 3/118 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
+I G+ D+ V + G+ VG + L L + + I + +T
Sbjct: 763 VIVETSDARGIEVDAPVLYRGMQVGIVKRLNLSELGDR-VMIHLSIESRYQHLVRNNTEF 821
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ ++ +S + + E + + P + +
Sbjct: 822 WAASGYTIDVSLQGVSMNSGTMSQLLKGGIEFSTPSGRVVQPQAKPNRHFLLQRKIPQ 879
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 23 FWLLPIVAFAIGCLLF--FQILKERGETITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 79
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ + +A I P+ L T +
Sbjct: 80 YFV-DDLKKVEVQAEINPEAKSVLRDDTKFWL 110
>gi|225434000|ref|XP_002272428.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
Length = 257
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 12/99 (12%), Positives = 29/99 (29%), Gaps = 4/99 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD-TPLY 94
+ + G+ + VR G+ VG + + ++ A + D +
Sbjct: 1 KFRKYLAVFEFTQACGICKGTPVRIRGVTVGNV--IQVNP-SLKSIEAVVEVEDDKIIIP 57
Query: 95 PSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
++ + GL T I+++
Sbjct: 58 QNSLIEVNQSGLLMETLIDITPRDPLPTPSVGPLDPDCT 96
>gi|262201202|ref|YP_003272410.1| mammalian cell entry related domain-containing protein [Gordonia
bronchialis DSM 43247]
gi|262084549|gb|ACY20517.1| Mammalian cell entry related domain protein [Gordonia bronchialis
DSM 43247]
Length = 326
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 37/133 (27%), Gaps = 10/133 (7%)
Query: 1 MESKNY-YTSVGLFVVSILFFSFFSIYWLSRSNQY---DGPMAEVIIRIPGSVDGLSTDS 56
M + + V + S + + + V L+ +
Sbjct: 1 MSTSTRREIVINAVVFVTVIALAGWYLATSVYDWTPWEKSKTVTMRVHNTNLV--LTE-T 57
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V NG+PVG + G+ L + + + + T I Q G YI
Sbjct: 58 GVCVNGVPVGAVHGVTLTPDG---AELSLRYPAAQNIPSNATVAIGLQSALGEPYINFVP 114
Query: 117 LRKEKKTIFQIAT 129
E + A
Sbjct: 115 GPSESPPLPDGAV 127
>gi|150403677|ref|YP_001330971.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C7]
gi|150034707|gb|ABR66820.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C7]
Length = 729
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 38/421 (9%), Positives = 121/421 (28%), Gaps = 23/421 (5%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S ++ + + + + V ++G +G + + + +
Sbjct: 146 SGSEASKYSDYKVDNIDNALAICVVAPVYYSGELIGTVTMVDIVNKDDYWV-------DS 198
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
ATI + + T ++ + +
Sbjct: 199 LKERTENEATIFLKNVRISTTVQTDGHDAIGTKCSDEVYNTILNHQEYVGTATVLGSEYI 258
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ + + D + E P I ++A + ++ +
Sbjct: 259 TKYSPIEDIDGNVIGMVFTGIPEAPFVAVIHETRNEIIIIALLGLLLSILIALYTGRKIT 318
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN----IQVSSNNFVKSSDQVINTVHD 266
+ + + + L + + + N +K+ D + +
Sbjct: 319 KPIEELKKGTAEFGGGNYDYKTKVKTGDELEELSDSFNGMAENVKNLMKTMDMDKVELAN 378
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ T K D + + A +++ ++ + + Q
Sbjct: 379 LLNNITTVMNKVAKGDFTARADENAENNTLQKAINTAVSNVALLIKELREEVDLLNIQVH 438
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI 386
++ + E + + +++ + AE S + + L+E + +D + + +E+
Sbjct: 439 RVEDQLKGAEETATQVTEAATQVAEASS--DQSAKLQEASDQLEDTYEVAKSVYNAAEET 496
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
I N S++G+ ++N + ++Q N ++ + + + G + +
Sbjct: 497 VNAANEIAEN----SENGVKKVENAISRMQGITNVIEELGKSIQ------MLGEDGKKIN 546
Query: 447 I 447
Sbjct: 547 E 547
>gi|223462235|gb|AAI50810.1| Laminin B1 subunit 1 [Mus musculus]
Length = 1834
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1490 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 1549
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + T++ +E I
Sbjct: 1550 NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVIL 1609
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1610 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1669
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1670 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 1706
>gi|148704971|gb|EDL36918.1| laminin B1 subunit 1 [Mus musculus]
Length = 1849
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1505 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 1564
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + T++ +E I
Sbjct: 1565 NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVIL 1624
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1625 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1684
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1685 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 1721
>gi|114326497|ref|NP_032508.2| laminin subunit beta-1 [Mus musculus]
Length = 1834
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1490 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 1549
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + T++ +E I
Sbjct: 1550 NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVIL 1609
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1610 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1669
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1670 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 1706
>gi|12851534|dbj|BAB29079.1| unnamed protein product [Mus musculus]
Length = 911
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 567 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 626
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + T++ +E I
Sbjct: 627 NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVIL 686
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 687 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 746
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 747 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 783
>gi|21595540|gb|AAH32276.1| Lamb1-1 protein [Mus musculus]
Length = 984
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 640 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 699
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + T++ +E I
Sbjct: 700 NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVIL 759
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 760 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 819
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 820 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 856
>gi|74181151|dbj|BAE27840.1| unnamed protein product [Mus musculus]
Length = 1834
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1490 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 1549
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + T++ +E I
Sbjct: 1550 NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVIL 1609
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1610 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1669
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1670 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 1706
>gi|54293186|ref|YP_125601.1| hypothetical protein lpl0232 [Legionella pneumophila str. Lens]
gi|53753018|emb|CAH14461.1| hypothetical protein lpl0232 [Legionella pneumophila str. Lens]
Length = 228
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 18/134 (13%), Positives = 42/134 (31%), Gaps = 9/134 (6%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
+ +++ ++ GS+ GL T + V + G+ +G I + + + +
Sbjct: 2 ILGGTFFYI---EYKRAQKQTFVMFFKGSLKGLVTTAPVTYRGVKIGEIKVIEITENKEH 58
Query: 80 H-----SLAKALIRPDTPLYPSTTA-TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + I +A IT L T E + I + +
Sbjct: 59 SKVLIPVYVQFFVERTYGFSQDPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYK 118
Query: 134 RAMITATPSGINYF 147
+ + P +
Sbjct: 119 QTYYHSYPVFPTHN 132
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 14/159 (8%), Positives = 51/159 (32%), Gaps = 11/159 (6%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
D + + + T L ++ + + + T + + ++
Sbjct: 80 DPIHLLIDNGYVANITKPNLLTGVAEIELIKPTPAVKYKQTYYHSYPVFPTHNSAEKYTS 139
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ ++ + + ++ + KE + Q+ + +N+ +PS+ L
Sbjct: 140 MEEAFEAAKKAFEDVSELVRSKEIQDTLEAIQKVSENLGQLASSLNQDVPSVVAYLNQ-- 197
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
++++ + + R P+ ++ G+
Sbjct: 198 ---------SLKQITSAAYSTQNLTDYLSRYPESLLRGK 227
>gi|325003318|ref|ZP_08124430.1| putative Mce family protein [Pseudonocardia sp. P1]
Length = 484
Score = 48.8 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 27/279 (9%), Positives = 83/279 (29%), Gaps = 14/279 (5%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GL V+++ ++ + V + + + + V+ G+ VG +
Sbjct: 10 GLAFVTVIVVLLGLAV--AQYSGLFSSGVPVTLNVARVGTQMQERADVKVRGLIVGEVDQ 67
Query: 71 LFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLR-KEKKTIFQI 127
+ D + + + + P + + A + + L G ++ L + +
Sbjct: 68 VTSDGQTTS---IEMSMNPALIDQIPENVQAQLLPKTLFGEKFVSLVPPQAPATTRLTAG 124
Query: 128 ATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
R+ + + ++ + +S S+ +Q + + + LT
Sbjct: 125 DVIPEDRSQGAIEVERVLDELLPLLQTVRPQDLATTLSSLSQALQGRGDQLGQTLTQLNT 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+E ++ + + I ++ + ++ + + +
Sbjct: 185 LVEGLNPAVPDLQEDIRQLATFSDNLNTAAPDLLDALDDLTVTSRTIVEKREGLRNLYRS 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + D +I R T +T +
Sbjct: 245 VTGASDDLRAFLDANGDNIIGVSSASRPTLETLARYSPE 283
>gi|320007320|gb|ADW02170.1| virulence factor Mce family protein [Streptomyces flavogriseus ATCC
33331]
Length = 439
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 35/276 (12%), Positives = 85/276 (30%), Gaps = 14/276 (5%)
Query: 16 SILFFSFFSIYWLSR--SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+ W+S + A V +R + + ++ V+ G+ +G + +
Sbjct: 16 VAFVLVPAVLVWVSVSVYEKDFTDDATVTVRTGSVGNEMHDNAEVKLRGVVIGEVRHIAS 75
Query: 74 DQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATE 130
D + + IRPD + TA + L G ++ + +T+ A
Sbjct: 76 DGDG---ARLTLAIRPDRLGQIPADVTAQMLPTTLFGERFVALVPPAVPSAETLRAGAVI 132
Query: 131 RNQRAMITA------TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
R+ E + ++ S+ ++ + + L T A+++
Sbjct: 133 PQDRSSNAIELEEVLDNVLPMLTAVKPEKLAATLNAVSQALEGRGDKLGDTLVTLDAHLK 192
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ L + I +++ + + ++ T + +A
Sbjct: 193 EFNPQLPTLNADIKELVKVSHLYADAAPDVLDALTDFTTTSGTIAEQQAELADLYGSTTA 252
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + K+ D +I R T + E
Sbjct: 253 SADDVTAFLRKNKDNLIRLSASGRPTLELLAEYSDA 288
>gi|304312039|ref|YP_003811637.1| putative paraquat-inducible protein b [gamma proteobacterium HdN1]
gi|301797772|emb|CBL45994.1| putative paraquat-inducible protein b [gamma proteobacterium HdN1]
Length = 775
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 18/85 (21%), Positives = 31/85 (36%), Gaps = 4/85 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL-DQE 76
+ WL QY +I+ S DG+ + V+F GI VG + + + D
Sbjct: 26 LIALVVGLWLG-YQQYLHRPVTIIVHFS-SGDGIVVGKTEVKFEGIKVGTVTDMTVEDSL 83
Query: 77 YPNHSLAKALIRPDTPLYPSTTATI 101
++ + R L T +
Sbjct: 84 RGVRAVVEMDYRTQHYLVAGTQFWL 108
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ ++ E+ +R P + +GL + +++ GI +G + +FLD ++ + +A
Sbjct: 514 ADYDKAAEQGIEIRVRFPQN-EGLEVGAPIKYQGIVLGEVRRVFLDNDFRHVVVA 567
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 20/66 (30%), Gaps = 8/66 (12%)
Query: 43 IRIPGSVDGLSTD-SSVRFNGIPVGRIVGLF------LDQEYPNHSLAKALIRPDTPLYP 95
IR P GL + VR+ G VG + + + + + L
Sbjct: 285 IRFPD-AKGLQKGVTQVRYKGFVVGEVKNIRHEPVAAGQPLNGAVARVGIDPQYEPFLRT 343
Query: 96 STTATI 101
T +
Sbjct: 344 GTRFWL 349
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRT 103
+S S + + +PVG + L + + A R L ++ +
Sbjct: 412 VSRGSPILYRKVPVGEVQSFELADDGKRIVVNAFIEARYAHLLRNNSRFWNAS 464
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 8/91 (8%), Positives = 19/91 (20%), Gaps = 1/91 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRTQG 105
+ L S V + I VG + L + + + +
Sbjct: 166 RDLGSLHVGSPVTYRKITVGAVSQYLLKDDGRGVQFKVVIDAEYAHLVKKGSRFWNNSGL 225
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAM 136
+ + T+ +
Sbjct: 226 RVAAGLSGVDVRMESLATLVAGGVSFDTPTH 256
>gi|226306856|ref|YP_002766816.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226185973|dbj|BAH34077.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 389
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 31/118 (26%), Gaps = 5/118 (4%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEY 77
++ NQ + + GL + V+ G+ VG + + +
Sbjct: 17 IVGVIALSVASFNQVFVARVPITVIAER--AGLVMDPGARVKMAGVTVGSVESITPTDDA 74
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQR 134
+ + I + G ++ S + + AT R
Sbjct: 75 TAQLSLSIDPEALESIPSNVDVAITSNTAFGAKFVSLSSPEQPSSARLAAGATIDASR 132
>gi|229492766|ref|ZP_04386567.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229320425|gb|EEN86245.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 389
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 14/118 (11%), Positives = 31/118 (26%), Gaps = 5/118 (4%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEY 77
++ NQ + + GL + V+ G+ VG + + +
Sbjct: 17 IVGVIALSVASFNQVFVARVPITVIAER--AGLVMDPGARVKMAGVTVGSVESITPTDDA 74
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQR 134
+ + I + G ++ S + + AT R
Sbjct: 75 TAQLSLSIDPEALESIPSNVDVAITSNTAFGAKFVSLSSPEQPSSVRLAAGATIDASR 132
>gi|257784303|ref|YP_003179520.1| YhgE/Pip C-terminal domain-containing protein [Atopobium parvulum
DSM 20469]
gi|257472810|gb|ACV50929.1| YhgE/Pip C-terminal domain protein [Atopobium parvulum DSM 20469]
Length = 726
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 55/478 (11%), Positives = 138/478 (28%), Gaps = 45/478 (9%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDS--SVRFNGIPV 65
+ L V L WL+ +D G E+ I + + G VR + +
Sbjct: 20 IALVVCVGLVILPSLYAWLNIEGSWDPYGHTNEIKIAVANNDAG-YQSDLIPVR---VNI 75
Query: 66 GR--IVGLF--------LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
G + L + + ++ L P + L+G
Sbjct: 76 GERMVSKLSESTTIHYVITSKEDAEHGVQSGAYYAALLIPENFSQELLASLSGQENDASI 135
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
T +K ++ A T ++ S E + I + + + +
Sbjct: 136 TYLSNQKLGAIAPIVTDKAAESARTEIERSFAESVTEVGAGLIGELTNNADDSNLSSVVT 195
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVT-------------PHSSDSKNTFNTITD 222
+ +A N + + + + S ++ T D
Sbjct: 196 KLDETLVHGSNELRIAANHIGVYQGLVDSAQQIIESTSDLSSSSSNTLSSAQETLLQAAD 255
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
++ + + + + +D + N Q+ +I+
Sbjct: 256 GTQRMNDAATSATQAVDSALAQTSASFDTLNTSINDALDNASTTAGHAASNIQDAASRIE 315
Query: 283 HLLS----------DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ S + + + IA ++ + + E+T+ Q I I
Sbjct: 316 QVKSGYESLLTSLQSVKAALPTNLQGLLDAPIARLQGSIATLQNLQDELTNAAQSINDGI 375
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + +N + + +S + SL ++ +T+ ++ +
Sbjct: 376 SVSATQRAQINALLSQASSDLSTTRSDLQTALKTSL-TSISTSLTDVSNTTSTLSESLTQ 434
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI---VWGREKGSVKI 447
++QN + S N++ L ++ N D + + + + ++ +V+
Sbjct: 435 TLQDIQNIANSTANNLSAFSSTLSKSKNQLTDLADKLDLIHAQLSEALSSKDIKTVRQ 492
>gi|167854634|ref|ZP_02477415.1| hypothetical protein HPS_02619 [Haemophilus parasuis 29755]
gi|167854389|gb|EDS25622.1| hypothetical protein HPS_02619 [Haemophilus parasuis 29755]
Length = 908
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 3/117 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
II +G++ + V + G+ VG + L L + L I + ++
Sbjct: 781 IIVETTDANGITPQAPVMYRGMQVGMVQQLSLSELGDR-VLIHLRIANQYKHLVRKNSEF 839
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
+ I+ +S +F + + P +
Sbjct: 840 WASSGYTMDISLNGVSINSGTMSQLFNGGISFSTPSSKVVQPQAEANRRFLLQRKLP 896
Score = 41.1 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I I LS +++ G+ +G + L LD A A I
Sbjct: 662 TSGNTYITLIAQDASKLSKGMPIKYMGLTIGNVETLQLD-NAKKQVKATAYIEGQY 716
Score = 39.5 bits (89), Expect = 0.98, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + ++ IR DG++ +++R+ G+ +G++ +
Sbjct: 43 FWLLPIVAFVIGCLLF--FQILQEQGQKITIRFSK-GDGITAGKTAIRYQGLQIGQVKKV 99
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ +A + P+ L T +
Sbjct: 100 YFI-NELKEVEVEAEVNPEAKSVLKEGTKFWL 130
>gi|183599333|ref|ZP_02960826.1| hypothetical protein PROSTU_02798 [Providencia stuartii ATCC 25827]
gi|188021568|gb|EDU59608.1| hypothetical protein PROSTU_02798 [Providencia stuartii ATCC 25827]
Length = 777
Score = 48.4 bits (112), Expect = 0.002, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 37/95 (38%), Gaps = 7/95 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + L F + + L + EV I S G+ + + +R+ G+ VG + +
Sbjct: 26 FWLLPLVAVFIAGWLL--FQHWLEQGTEVTIEFS-SAPGVVSGRTPIRYQGVEVGLVQSV 82
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ Q+ + KA I D L T + T
Sbjct: 83 TVSQD-MKKIIVKASINKDMKPALTSGTKFWLVTP 116
Score = 40.3 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 14/113 (12%), Positives = 28/113 (24%), Gaps = 3/113 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RPDTPLYPSTTATIRTQGL 106
V + + + F G+ +G + GL+L E + I + +T I +
Sbjct: 656 VGSIQVGTPLLFRGMEIGTVTGLYL-GELSDRVYVATRIGKEFQYLIRDNTQFWISSGYN 714
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
K + + P + K
Sbjct: 715 LSFGLTGGMIKSGTFKQFVRGGISLATPPTVPLAPKAKPDQHFILKLEPPKDW 767
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 15/40 (37%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
V+ LS +R+ GI +G+I L L
Sbjct: 534 VVTLTTFDASKLSEGMPIRYLGIDIGQIDSLKLSPNNREV 573
>gi|325578160|ref|ZP_08148295.1| paraquat-inducible protein B [Haemophilus parainfluenzae ATCC
33392]
gi|325159896|gb|EGC72025.1| paraquat-inducible protein B [Haemophilus parainfluenzae ATCC
33392]
Length = 885
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 30/112 (26%), Gaps = 3/112 (2%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTAT 100
I L+ S V + G+ VG + L+ L I P + ++
Sbjct: 756 ILETSDAMNLTEGSPVLYRGVEVGTVRKFELNSLGDR-VLVHIAITPKYQHLVRKNSEFW 814
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + + + + + + + + P +
Sbjct: 815 VSSGYDFNLGWKGAEFNTGSIQQLLKGGISFSTPSGTIVQPQATANQRFMLQ 866
Score = 40.3 bits (91), Expect = 0.59, Method: Composition-based stats.
Identities = 10/106 (9%), Positives = 30/106 (28%), Gaps = 10/106 (9%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + F+ + F + I ++ + +R+ G+
Sbjct: 28 RISPFWLLPFIALCIGAILFF-------QIVQERGKTITITFSNGAGLVADKTPIRYQGL 80
Query: 64 PVGRIVGLFLDQEYPNHSLAKALI--RPDTPLYPSTTATIRTQGLA 107
+G + + + +A I L +T + ++
Sbjct: 81 QIGVVKKVNFT-DNMQKVKVEANIYSEATEVLKENTKFWLVQPSVS 125
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+VI I LS S+R+ G+ VG + + LDQ+ N AKALI P
Sbjct: 636 KSAGQVITLITDDATALSKGMSLRYLGMNVGEVEQISLDQKT-NRITAKALINPSY 690
>gi|119714950|ref|YP_921915.1| virulence factor Mce family protein [Nocardioides sp. JS614]
gi|119535611|gb|ABL80228.1| virulence factor Mce family protein [Nocardioides sp. JS614]
Length = 425
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 18/113 (15%), Positives = 37/113 (32%), Gaps = 7/113 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + +G VV + + ++ EV ++ L + V+
Sbjct: 1 MRLIAGHKVLG--VVFLCLLLAGGYLTYAVFSKKFADYDEVTLQTSKIGMQLPVRADVKI 58
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITY 111
G+ VG ++ + + I P + + T +I + L G Y
Sbjct: 59 RGVIVGEVLDFEPTPDG---ADVTLGIYPSQLDTIPANVTGSIVPKTLFGEKY 108
>gi|301156062|emb|CBW15533.1| conserved protein [Haemophilus parainfluenzae T3T1]
Length = 885
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 30/112 (26%), Gaps = 3/112 (2%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTAT 100
I L+ S V + G+ VG + L+ L I P + ++
Sbjct: 756 ILETSDAMNLTEGSPVLYRGVEVGTVRKFELNSLGDR-VLVHIAITPKYQHLVRKNSEFW 814
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + + + + + + + + P +
Sbjct: 815 VSSGYDFNLGWKGAEFNTGSVQQLLKGGISFSTPSGTIVQPQATANQRFMLQ 866
Score = 39.5 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 10/106 (9%), Positives = 31/106 (29%), Gaps = 10/106 (9%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ + F+ + F + I ++ + +R+ G+
Sbjct: 28 RISPFWLLPFIALCIGAILFF-------QIVQEQGKMITITFSNGAGLVADKTPIRYQGL 80
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+G + + + +A I + L +T + ++
Sbjct: 81 QIGVVKKVNFT-DNMQKVKVEASIHSEATDVLKENTKFWLVQPSVS 125
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+VI + LS S+R+ G+ VG + + LDQ+ N AKALI P
Sbjct: 636 KSAGQVITLLTDDATSLSKGMSLRYLGMNVGEVEQIALDQKT-NRITAKALINPSY 690
>gi|219872265|ref|YP_002476640.1| paraquat-inducible protein B [Haemophilus parasuis SH0165]
gi|219692469|gb|ACL33692.1| paraquat-inducible protein B [Haemophilus parasuis SH0165]
Length = 888
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 3/117 (2%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTA 99
II +G++ + V + G+ VG + L L + L I + ++
Sbjct: 761 IIVETTDANGITPQAPVMYRGMQVGMVQQLSLSELGDR-VLIHLRIANQYKHLVRKNSEF 819
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
+ I+ +S +F + + P +
Sbjct: 820 WASSGYTMDISLNGVSINSGTMSQLFNGGISFSTPSSKVVQPQAEANRRFLLQRKLP 876
Score = 41.1 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I I LS +++ G+ +G + L LD A A I
Sbjct: 642 TSGNTYITLIAQDASKLSKGMPIKYMGLTIGNVETLQLD-NAKKQVKATAYIEGQY 696
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 12/92 (13%), Positives = 32/92 (34%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + ++ IR DG++ +++R+ G+ +G++ +
Sbjct: 23 FWLLPIVAFVIGCLLF--FQILQEQGQKITIRFSK-GDGITAGKTAIRYQGLQIGQVKKV 79
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ +A + P+ L T +
Sbjct: 80 YFI-NELKEVEVEAEVNPEAKSVLKEGTKFWL 110
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 8/51 (15%), Positives = 19/51 (37%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
++ + + ++ +SV + +PVG I + N +I
Sbjct: 165 LVKLVASDLGSMTVGASVYYRKVPVGSITDYRFTPDQKN-VEIDVVIDKKY 214
>gi|15607733|ref|NP_215107.1| MCE-family lipoprotein LprL [Mycobacterium tuberculosis H37Rv]
gi|15839996|ref|NP_335033.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|121636511|ref|YP_976734.1| mce family lipoprotein LprL [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660363|ref|YP_001281886.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis H37Ra]
gi|148821796|ref|YP_001286550.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis F11]
gi|215402361|ref|ZP_03414542.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis 02_1987]
gi|215425825|ref|ZP_03423744.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis T92]
gi|215429426|ref|ZP_03427345.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis EAS054]
gi|215444706|ref|ZP_03431458.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis T85]
gi|219556435|ref|ZP_03535511.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis T17]
gi|224988983|ref|YP_002643670.1| putative MCE-family lipoprotein [Mycobacterium bovis BCG str. Tokyo
172]
gi|253797528|ref|YP_003030529.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis KZN 1435]
gi|254363552|ref|ZP_04979598.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis str. Haarlem]
gi|260185470|ref|ZP_05762944.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis CPHL_A]
gi|260203757|ref|ZP_05771248.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis K85]
gi|289441982|ref|ZP_06431726.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis T46]
gi|289446146|ref|ZP_06435890.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis CPHL_A]
gi|289552846|ref|ZP_06442056.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis KZN 605]
gi|289568526|ref|ZP_06448753.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis T17]
gi|289573193|ref|ZP_06453420.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis K85]
gi|289744307|ref|ZP_06503685.1| mce family lipoprotein LprL [Mycobacterium tuberculosis 02_1987]
gi|289749090|ref|ZP_06508468.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis T92]
gi|289752633|ref|ZP_06512011.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289756672|ref|ZP_06516050.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis T85]
gi|294996106|ref|ZP_06801797.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis 210]
gi|297633088|ref|ZP_06950868.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis KZN 4207]
gi|297730066|ref|ZP_06959184.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis KZN R506]
gi|306802201|ref|ZP_07438869.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis SUMu008]
gi|306806409|ref|ZP_07443077.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis SUMu007]
gi|306970802|ref|ZP_07483463.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis SUMu010]
gi|313657393|ref|ZP_07814273.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis KZN V2475]
gi|2222765|emb|CAB09981.1| POSSIBLE MCE-FAMILY LIPOPROTEIN LPRL (MCE-FAMILY LIPOPROTEIN MCE2E)
[Mycobacterium tuberculosis H37Rv]
gi|13880139|gb|AAK44847.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|121492158|emb|CAL70624.1| Possible mce-family lipoprotein lprL [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|134149066|gb|EBA41111.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis str. Haarlem]
gi|148504515|gb|ABQ72324.1| MCE-family lipoprotein LprL [Mycobacterium tuberculosis H37Ra]
gi|148720323|gb|ABR04948.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis F11]
gi|224772096|dbj|BAH24902.1| putative MCE-family lipoprotein [Mycobacterium bovis BCG str. Tokyo
172]
gi|253319031|gb|ACT23634.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis KZN 1435]
gi|289414901|gb|EFD12141.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis T46]
gi|289419104|gb|EFD16305.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis CPHL_A]
gi|289437478|gb|EFD19971.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis KZN 605]
gi|289537624|gb|EFD42202.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis K85]
gi|289542280|gb|EFD45928.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis T17]
gi|289684835|gb|EFD52323.1| mce family lipoprotein LprL [Mycobacterium tuberculosis 02_1987]
gi|289689677|gb|EFD57106.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis T92]
gi|289693220|gb|EFD60649.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289712236|gb|EFD76248.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis T85]
gi|308347061|gb|EFP35912.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis SUMu007]
gi|308351004|gb|EFP39855.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis SUMu008]
gi|308359592|gb|EFP48443.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis SUMu010]
gi|326902425|gb|EGE49358.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis W-148]
gi|328457311|gb|AEB02734.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis KZN 4207]
Length = 402
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 13/281 (4%)
Query: 12 LFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+F++++L L + +++P ++ L+T+S VR
Sbjct: 31 VFLLAVLLAPVVLTSCTWRGIANVPLPVGRGMGPDRMTIYVQMPDTLA-LNTNSRVRVAD 89
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L + + P L + TA I L G ++EL+
Sbjct: 90 VWVGTVRDISL---RNWIATLTLELEPTVRLPANATAKIGQTSLLGTQHVELAAPPIPSP 146
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + T I + +I+ ++
Sbjct: 147 QPLKSGDTIGLKNSSAYPTVERTLASVALILTGGGIVNLDVIQTEILNILDGHAGQIREF 206
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+E ++T A + + T N D + + +
Sbjct: 207 LERLATFTAELNNQRGDLTRAIDSTNQLLTIIANRNDTLDRVLTDVPPLIEHFADTGQLF 266
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + ++ + T ++ +T Q+ Q ++++
Sbjct: 267 ADATESLGRFSEVANRALAATRPNLHQTLQSLQRPLRQLER 307
>gi|323518641|gb|ADX93022.1| paraquat-inducible protein B [Acinetobacter baumannii TCDC-AB0715]
Length = 482
Score = 48.4 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 42/417 (10%), Positives = 113/417 (27%), Gaps = 26/417 (6%)
Query: 36 GPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD---- 90
+ + + +GL ++VR+ + +G + + L ++ +H +A+ +R D
Sbjct: 64 SNGPTIEVSF-RTAEGLVAGKTTVRYKQVDIGVVRQIDLAEDR-SHIIARIDLRKDASNF 121
Query: 91 ---------TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
T+ L +YIE+ + +K + E
Sbjct: 122 AAQDSRFWVVRPRIGTSGVSGIDTLLSGSYIEVDGGKSPEKKLEFTGLEIPPVITSDVPG 181
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ + R I K + +
Sbjct: 182 KEFFLKADDLGSLDIGSPIYYRRINVGQITAYKLSDDGKSVELQTFIRAPYDKFVTTDTR 241
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ + + FN T + S+ A + + S N S + +
Sbjct: 242 FWQASGIDVTLNASGFNLDTQSLASIVAGGIAFGFPENSNATVAANKSRFNLWDSKAEAL 301
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK-ETSAFLENIADSTSNMRSSISA--I 318
+ + + + + + + ++ +R + A
Sbjct: 302 KEPDGLPRGVIMYFDHSLRGLAVGAPIDFMGIEIGSIKSINAEFYNNYKQIRMRVEAVIY 361
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS------ALKENNSLFKDA 372
+ Q + + ++ + + + L++ N I+ A + D
Sbjct: 362 PSRVENGQALNPNSDIFKDFVEHGWRAQMRTGNLLTGQNYIALDKFPKAKPATLQILNDG 421
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNF-SQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + T + + I + L F D++ ++ + + D +
Sbjct: 422 RVVIPTTATELSGLQAQVSQIADKLTKFPLVEIGQDVRKTLKNMNTAIESTDKLVKR 478
>gi|120406150|ref|YP_955979.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958968|gb|ABM15973.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 400
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 26/80 (32%), Gaps = 9/80 (11%)
Query: 35 DGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD-- 90
P +V + P GL D+ V++ GI VG++ + + + I
Sbjct: 37 FTPTDKVTVLSPR--AGLVMDVDAKVKYRGIQVGKVESIEYAGD---AAKLTLAINRGDL 91
Query: 91 TPLYPSTTATIRTQGLAGIT 110
+ I + G
Sbjct: 92 RYIPADAPVRIGGTTIFGAK 111
>gi|111019742|ref|YP_702714.1| Mce family protein [Rhodococcus jostii RHA1]
gi|110819272|gb|ABG94556.1| possible Mce family protein [Rhodococcus jostii RHA1]
Length = 282
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/243 (11%), Positives = 74/243 (30%), Gaps = 17/243 (6%)
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G+PVG++ + L + S + D L P++TA I+ + L G Y
Sbjct: 1 MSGVPVGKVSDVQLSA-TDSVSEVSFSLSEDIALSPTSTAAIKYKNLIGDRY-------- 51
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + P + + + + + +
Sbjct: 52 ----LELTVLPDGRSPRGEHDPIPVAQTTPALDIDTLVNGFRPLLEGLEPDQTNRLSASI 107
Query: 180 IANIETISTVLANNISHI----DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
I + + + + + + +V ++ D+ NT T D + +
Sbjct: 108 IEVLNGRQESIGTLVEQLGSLGNALADRDEVIGNTVDNLNTVLTTVDGRSDQFGSLVTEL 167
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
Q + + + + + T + + Q +++ ++ +S+ +
Sbjct: 168 QQLTTGLSADRDTLTRALEQLDNASAETQSVLEQARPPLQADIEQLSRTAANLNSRTDTL 227
Query: 296 ETS 298
+
Sbjct: 228 NLT 230
>gi|326382583|ref|ZP_08204274.1| mammalian cell entry related domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
gi|326198702|gb|EGD55885.1| mammalian cell entry related domain-containing protein [Gordonia
neofelifaecis NRRL B-59395]
Length = 431
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL--DQEYPNHSLAKALI 87
R EV ++ DGL + + VR+NG VG + + + + P ++
Sbjct: 36 RYEGKFEDRTEVTAQMTDVGDGLVSGADVRYNGFIVGSVDTITMIGSGDDPTK-DVALIL 94
Query: 88 RPDTP--LYPSTTATIRTQGLAG 108
P + +TTA L G
Sbjct: 95 DPQQASGIPANTTARTVPSNLFG 117
>gi|153845085|ref|ZP_01993728.1| paraquat-inducible protein B [Vibrio parahaemolyticus AQ3810]
gi|149745155|gb|EDM56406.1| paraquat-inducible protein B [Vibrio parahaemolyticus AQ3810]
Length = 225
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 35/104 (33%), Gaps = 10/104 (9%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
ME++ VV F FF++ + D +++ L V +
Sbjct: 1 MENRA--------VVEAFFTVFFAVLDVPPVASPDAEGLRIVLTHRE-AGKLGVGDPVIY 51
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRP-DTPLYPSTTATIRT 103
G VGR+ D + + +P D+ + T + +
Sbjct: 52 KGFTVGRVEKTSFDVDTRRALYQLFIFKPYDSLVRTRTKFWLNS 95
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 20/58 (34%), Gaps = 6/58 (10%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP------NHSLAKALIR 88
E ++ SV GL + V + G+ +G ++ + + P I
Sbjct: 158 EYIEFVMLFEESVRGLKRKAPVEYRGLRIGTVMRVPMRLPTPEEHFSAKRIPVLVRIE 215
>gi|255603659|ref|XP_002538093.1| conserved hypothetical protein [Ricinus communis]
gi|223513856|gb|EEF24289.1| conserved hypothetical protein [Ricinus communis]
Length = 167
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/160 (9%), Positives = 44/160 (27%), Gaps = 3/160 (1%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
L + S S + + + + + + +
Sbjct: 6 ASGLRAQLRSGNLLTGQSFVALDFFPNAKRATINWESDIPQLPTEVGALDALQAALGTLA 65
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ ++ + + + A D + + + + +G + N
Sbjct: 66 KQIEKVP-VEQIGNNLEQMLASGNRLMQRLD-SETAPEAQAVLKAARKALDEVGQTMAND 123
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
S D ++R+L + ER+P+ ++ G+
Sbjct: 124 S-QFKQDAGAMMRELTRAAQQLRLLSDYLERHPEALLRGK 162
>gi|326331736|ref|ZP_08198024.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
gi|325950535|gb|EGD42587.1| virulence factor Mce family protein [Nocardioidaceae bacterium
Broad-1]
Length = 380
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 82/293 (27%), Gaps = 10/293 (3%)
Query: 3 SKNYYTSV---GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
++ +T + G+ L + + V + + L VR
Sbjct: 9 TRAEHTKLFVSGIAFTVTLALMIALCV--AIYQKAFVQFTTVSVEADRAGLQLPRYGDVR 66
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+G+ VG++ + D + + + I+ L G Y+E
Sbjct: 67 MHGVIVGQVREIRQDG-KKAVIELGLEPEQAEQIPANVSVAIKPTTLFGQKYVEFIDPEG 125
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ A + + + A S + + + + L+
Sbjct: 126 K----RTGALSDGTVIPADRVRTSVELDVILARLFPLLKSIRPQDLNSTLHALATALSGN 181
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ L + + ++ + T + ++ + V
Sbjct: 182 GEKLGETLVQLNDYLEEMNVHLPTLERDLEDMADVAETYSMAAPDLVKVLENTTTTAKTV 241
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ E + + +D N + + + + E+ + LL+D+S +
Sbjct: 242 SAQRERLGGLLTSVTGVADTSKNLLAENEKAIRYETELAVPLLKLLADYSPEY 294
>gi|90407007|ref|ZP_01215197.1| hypothetical protein PCNPT3_06453 [Psychromonas sp. CNPT3]
gi|90311878|gb|EAS39973.1| hypothetical protein PCNPT3_06453 [Psychromonas sp. CNPT3]
Length = 887
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/89 (15%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQ 75
I+ L + + I + +G+ D + +R+ G+ VG + + LD
Sbjct: 26 IVAAILGGWILLKNITNANES---IKIHFS-NAEGIIVDKTRIRYKGVIVGTVKKIELDS 81
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
+ +A L T + +
Sbjct: 82 SSGVNIIATIESHATFMLREKTQFWLVSP 110
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 12/64 (18%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP-LYPSTTAT 100
I I G+ L + +R G+ +G ++ L L++ ++A L ++
Sbjct: 646 ITLIFGNAKNLKVGNKLRLKGLVIGEVIKLSLNKNNEIQAIANIDAPFTAKVLRKNSRFW 705
Query: 101 IRTQ 104
I +
Sbjct: 706 IVSS 709
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLYPSTTATIRT 103
+ GL+ ++ + GI +G+I L L +L K + + + + +
Sbjct: 395 LTKDATGLNRGDAIVYQGITIGKIDSLNLSSSGKFIEALMKIEAKFSYLINKQSQFYLLS 454
Query: 104 QGLAGITYIELSTLRKEKKTIFQIAT 129
++ + + I
Sbjct: 455 GVNLKMSLTGIELQSSPFENIISGGI 480
>gi|240170393|ref|ZP_04749052.1| MCE family lipoprotein [Mycobacterium kansasii ATCC 12478]
Length = 411
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 33/304 (10%), Positives = 89/304 (29%), Gaps = 10/304 (3%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQY-------DGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+ V+ + + N G A++ +V + ++S V N +
Sbjct: 10 MLVLGAAVMLSVTGCAFNGLNSLPLPGAVGRGAGADIYHVEIANVGTMESNSPVMVNDVV 69
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG I + + H+ + ++ + + A++ L G ++EL+ ++
Sbjct: 70 VGSIGRMRVTG---WHADVEISVKHGVVIPANVIASVGQTSLLGSMHLELNPPPGKQGEG 126
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
R + P ++ S + + SS + +
Sbjct: 127 KLQPAAECARLHLAQPPCATVPLDKSSTYPSTEQTLSSLSVVINSGGFTQIGDIVHNFNA 186
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+S A+ ID++ + + + + I Q + ++
Sbjct: 187 ALSGRAADVRDLIDRLDRFVGTLDQQRGNIVASIQALNRLAGTFASQRDIITQALYKVPP 246
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+ V + + + T+ + G + L + + + +
Sbjct: 247 ALDVLIRERPRITAALDRLRVFSDTATRLVNDAGSDLVTNLKNLEPTISALADVGPELDA 306
Query: 305 ADST 308
A +
Sbjct: 307 ALAY 310
>gi|225352505|ref|ZP_03743528.1| hypothetical protein BIFPSEUDO_04127 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225157012|gb|EEG70381.1| hypothetical protein BIFPSEUDO_04127 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 730
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 46/441 (10%), Positives = 123/441 (27%), Gaps = 22/441 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SVRFN-GI 63
V + +V+ L W + S + + + +G V+ + G
Sbjct: 19 IVSIIIVTGLVVIPGLFSWFNISASWNPFANTGNLKFAVANDDEG-YKSDLIPVKISIGD 77
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
V + L + + K T A + + + +
Sbjct: 78 QV--VNTLRANDQMDWTFTTKKEAIDGTKSGKYYAAVVIPKDFSTRMMTFFTADGDHATL 135
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR--HIQKIIENIEKPLTTTIA 181
+ ++N A E S+ ++ ++ Q E + T+
Sbjct: 136 TYYNNEKKNALAPKITGQGADTVAAQINEMFSETLTSTALSITSQLADELDKPESQATLT 195
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
N AN ++ + T S+ + + S +L++
Sbjct: 196 NFSNNMGNFANTLTDTSSALTTFSSLTLSAQNLLDSSNSLLSNVSDSAKNAGNELKQSKN 255
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK---MKSKETS 298
+ ++ + + +N+ + T + + ++ ++ +
Sbjct: 256 SINDLTGAVKTSTNALSTALNSSANSFGAVSTDIDSVFNNAGTQAGNTATALRNQAANVT 315
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
++ + + + + I + + LND + I+
Sbjct: 316 KQAQSYQNIYDALDELSNNNLMPEVAKIAIDHLKTNVGATITQLNDLANSLNTSADNIDT 375
Query: 359 ISALKEN-----NSLFKDAQRAMHTFRDTSE-KINRYIPSIGNNLQN---FSQSGLNDIQ 409
+ N L + A+ ++ + + ++ + I +++ N S D++
Sbjct: 376 KVSDTTADRERVNQLAQQAKASIDGIKTDFDSQLKPQLNDISDSISNTVTALSSTAADLK 435
Query: 410 NLVRKLQETVNHFDDCLNNFE 430
+ L T D L N
Sbjct: 436 GALGDLNSTTKSADKQLTNIR 456
>gi|262201200|ref|YP_003272408.1| mammalian cell entry related domain-containing protein [Gordonia
bronchialis DSM 43247]
gi|262084547|gb|ACY20515.1| Mammalian cell entry related domain protein [Gordonia bronchialis
DSM 43247]
Length = 371
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 12/105 (11%), Positives = 30/105 (28%), Gaps = 3/105 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ T + V G+ +G + G+ ++ H++ + + L A + +
Sbjct: 49 GVFTGNPVTRRGVTIGTVTGVESQRD---HAVIRFDVDGQYRLPVDVKAATVAPSIIAVR 105
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+ L + + S +S
Sbjct: 106 QVALIGDYHGGPELPAGQCIDRDSTSTPVSLSQSLEAVSQVSRQL 150
>gi|169631669|ref|YP_001705318.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243636|emb|CAM64664.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 393
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 31/92 (33%), Gaps = 4/92 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
++ R + L + VR G VG + + ++ + IR
Sbjct: 39 NMGSQSYKLTARF-ANALNLPAKAKVRLGGADVGEVESMDAV---DYVAVVQLRIREGVR 94
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
L TTA +RT G ++ ++ +
Sbjct: 95 LPVGTTAQLRTATPLGDVFVAVTPPATPSGQL 126
>gi|188587450|ref|YP_001918995.1| methyl-accepting chemotaxis sensory transducer [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179352137|gb|ACB86407.1| methyl-accepting chemotaxis sensory transducer [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 555
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 48/433 (11%), Positives = 135/433 (31%), Gaps = 28/433 (6%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+FV+ + F + + ++ GP++ ++ + G L
Sbjct: 50 IFVIVGITVVFALLVYFYIRSRVLGPLSYLLKACEQASRG------------------DL 91
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
E + I + + + +
Sbjct: 92 LRTVEPSSQIREIRQIEVGMGQLFGSLRQMVGKIQISAEQTQEYAKSLASGIEEANEAIN 151
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ SG + T + +++ +++I N + T + I +
Sbjct: 152 QIATTVNDISSGAEEQSQATDQTLQGVNERLEQVERISSNAKSAQETAEQMEQVIEDSSS 211
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ I T + + + + IT + ++ I Q + N + +
Sbjct: 212 KVENLIKSSEETAENNQKAREMIKKLTDQAEKITEIVNVVTDISEQTHL-LALNASIEAA 270
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE--TSAFLENIADSTS 309
S +VR + + ++I +L+ + + + N
Sbjct: 271 RAGDSGQGFAVVAQEVRNLAEESGKSAEEISNLIYKVKEMVNEADRLVEQSVNNSRQGAE 330
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI-----SALKE 364
++ +A++EI ++ ++ +++ L +S Q+ + + KIN I + +E
Sbjct: 331 YADTARNALKEIVTAVHRVAEKVDDVQSGAQVLKESIQEVQDSVQKINEIAQSNAAGAEE 390
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN--FSQSGLNDIQNLVRKLQETVNHF 422
+ ++ M +S+ +++ + + S+ Q+ + ++E +
Sbjct: 391 TAASTQEHTATMDEMNTSSDNLSKISEELLQLVNETLASEEVYQKYQDGINDIKEKLQEA 450
Query: 423 DDCLNNFERNPQD 435
+ L E + Q+
Sbjct: 451 SENLKEIEIDKQE 463
>gi|157961752|ref|YP_001501786.1| hypothetical protein Spea_1929 [Shewanella pealeana ATCC 700345]
gi|157846752|gb|ABV87251.1| Mammalian cell entry related domain protein [Shewanella pealeana
ATCC 700345]
Length = 876
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 4/85 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL EV I P S G+ + V++ G+ VG++V + +D++
Sbjct: 23 IIALALGAWLG-VKSIRESGVEVTIHFP-SATGMDIGKTLVKYQGLTVGKVVDMSIDKDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATI 101
R + T +
Sbjct: 81 KGVDVSVIMDYRAAPFVNEGTKFWL 105
Score = 37.2 bits (83), Expect = 6.1, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ + P SV L+T + +R+ G VG + + L Q+
Sbjct: 626 SQAKPISLTFPASVK-LATKAPIRYLGHKVGEVDSVTLTQD 665
>gi|126438082|ref|YP_001073773.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126237882|gb|ABO01283.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 415
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 50 DGLS--TDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
GLS + V FNG+ +G++ + +D + + +RP+ + + IR
Sbjct: 64 SGLSMDPGAKVTFNGVQIGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAIRAT 123
Query: 105 GLAGITY 111
+ G Y
Sbjct: 124 TVFGNKY 130
>gi|296165586|ref|ZP_06848111.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899059|gb|EFG78540.1| Mce family protein [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 308
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 33/239 (13%), Positives = 65/239 (27%), Gaps = 6/239 (2%)
Query: 25 IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
+ L + + G E++++ +V L + V +G VG + + L H
Sbjct: 3 VNSLPQPGKSYGDGYEIVLQF-ANVLSLPDRAKVVQDGTTVGLVTKINLASN---HVDVV 58
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
I PD + + AT++ + G TY+ L A T+ P
Sbjct: 59 TRIDPDVVVPANVHATLQQATVLGDTYVALERPESGPPAPALRPAGTVPLAQTTSPPQLE 118
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ + A R II + + + V + + M
Sbjct: 119 DTIANLA--NFVGSGSIQRAQNTIIGINRVTPARSGEFRDLVKRVDTDLADLSNNMDMVD 176
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
Q S + + ++ Q+ I +
Sbjct: 177 QWLTGVSGTAQVMYNDLPEYKYFWSTEGMLGWKRSFQVGSYIATVLPSIGSIYSGGYWL 235
>gi|226330436|ref|ZP_03805954.1| hypothetical protein PROPEN_04354 [Proteus penneri ATCC 35198]
gi|225201231|gb|EEG83585.1| hypothetical protein PROPEN_04354 [Proteus penneri ATCC 35198]
Length = 83
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 13/70 (18%), Positives = 27/70 (38%), Gaps = 4/70 (5%)
Query: 22 FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNH 80
F WL + ++ I S G+ + + +R+ G+ VG + + L +
Sbjct: 1 MFIASWL-LFQHWQDKGIQITIDF-QSASGIVSGRTPIRYQGVDVGIVKDVTLS-DDLRR 57
Query: 81 SLAKALIRPD 90
+ A +R
Sbjct: 58 VIVTADVRKK 67
>gi|108802101|ref|YP_642298.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119871254|ref|YP_941206.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108772520|gb|ABG11242.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119697343|gb|ABL94416.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 415
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 50 DGLS--TDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
GLS + V FNG+ +G++ + +D + + +RP+ + + IR
Sbjct: 64 SGLSMDPGAKVTFNGVQIGQVDTVEEIDDDGRPAAELALALRPEYVDLIPANAEVAIRAT 123
Query: 105 GLAGITY 111
+ G Y
Sbjct: 124 TVFGNKY 130
>gi|301605238|ref|XP_002932251.1| PREDICTED: myosin-11-like isoform 1 [Xenopus (Silurana) tropicalis]
Length = 1980
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 23/369 (6%), Positives = 97/369 (26%), Gaps = 1/369 (0%)
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L E ++ TI + L +K + + ++
Sbjct: 1211 VEELTEQLEQVKRVRVTLEKSKQALEKDNSELTIEIRSLNQAKQDVEHKKKKLESQLQEL 1270
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
++ + + ++ + + + LT + + + +
Sbjct: 1271 QSKYTDGERVRNELTEKSHRVQVELENVTVLLSEAETKSIKFSKDVAGLTAQLQDTQELL 1330
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
++ + + +S + T I L + L+
Sbjct: 1331 QEETRQKLNVSTKLRQVEDERNSLQEQLDEETEAKQTLERHISTLNIQLSDSKKKLQEFT 1390
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + + ++ + + + K++ + ++ + S
Sbjct: 1391 ATIESMEEGKKKLQRDIEGATQQFEEKASAYDKLEKTKNRLQQELDDLIVDLDNQRQLVS 1450
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ ++ ++ + + + + +E
Sbjct: 1451 NLEKKQKKFDQMLAEEKTISSKYADERDRAEAEAREKETKALSLARALDEALQSKEELER 1510
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
K + M + + + + + + + + + +++ + +L++ + +D
Sbjct: 1511 TNKLLKAEMEDLVSSKDDVGKNVHDL-EKAKRGLEQQVEEMKTQLEELEDELQATEDAKL 1569
Query: 428 NFERNPQDI 436
E N Q +
Sbjct: 1570 RLEVNMQAL 1578
>gi|301605240|ref|XP_002932252.1| PREDICTED: myosin-11-like isoform 2 [Xenopus (Silurana) tropicalis]
Length = 1981
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 23/369 (6%), Positives = 97/369 (26%), Gaps = 1/369 (0%)
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L E ++ TI + L +K + + ++
Sbjct: 1212 VEELTEQLEQVKRVRVTLEKSKQALEKDNSELTIEIRSLNQAKQDVEHKKKKLESQLQEL 1271
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
++ + + ++ + + + LT + + + +
Sbjct: 1272 QSKYTDGERVRNELTEKSHRVQVELENVTVLLSEAETKSIKFSKDVAGLTAQLQDTQELL 1331
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
++ + + +S + T I L + L+
Sbjct: 1332 QEETRQKLNVSTKLRQVEDERNSLQEQLDEETEAKQTLERHISTLNIQLSDSKKKLQEFT 1391
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + + ++ + + + K++ + ++ + S
Sbjct: 1392 ATIESMEEGKKKLQRDIEGATQQFEEKASAYDKLEKTKNRLQQELDDLIVDLDNQRQLVS 1451
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ ++ ++ + + + + +E
Sbjct: 1452 NLEKKQKKFDQMLAEEKTISSKYADERDRAEAEAREKETKALSLARALDEALQSKEELER 1511
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
K + M + + + + + + + + + +++ + +L++ + +D
Sbjct: 1512 TNKLLKAEMEDLVSSKDDVGKNVHDL-EKAKRGLEQQVEEMKTQLEELEDELQATEDAKL 1570
Query: 428 NFERNPQDI 436
E N Q +
Sbjct: 1571 RLEVNMQAL 1579
>gi|291286155|ref|YP_003502971.1| Mammalian cell entry related domain protein [Denitrovibrio
acetiphilus DSM 12809]
gi|290883315|gb|ADD67015.1| Mammalian cell entry related domain protein [Denitrovibrio
acetiphilus DSM 12809]
Length = 988
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 12/74 (16%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ I WL N Y E+ ++ GL + +++ GI +G++V + +
Sbjct: 23 ILAVGIIVWL-LYNGYVNSGKEIRVQFDTGA-GLVIGKTPLKYRGITIGKVVDFEIA-DS 79
Query: 78 PNHSLAKALIRPDT 91
+ + + +
Sbjct: 80 LDKVVVVIKLDHEA 93
Score = 41.5 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 1/57 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
I I L+ + V + G VG + FLD + A+I+P+
Sbjct: 521 KQGIRKIYLITEDASSLAKGAPVLYKGFKVGELGNRFLDADT-GKVRISAMIQPEYK 576
Score = 40.3 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
F + + Y G ++ S L T S V + +P G + + L + +
Sbjct: 854 ALFTFKIDDTPVSPYYGRKGLRLVLRSDSRSSLETGSPVYYRQVPAGGVEWVRLA-DDGS 912
Query: 80 HSLAKALIRPDTP 92
I
Sbjct: 913 RVEVGIFIEDKYR 925
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 34/358 (9%), Positives = 93/358 (25%), Gaps = 12/358 (3%)
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
+ V F G+ VG + + L+ + + L++ L + + Q +E
Sbjct: 302 TPVMFKGVKVGLVKDVKLNNDRSGAVVNIMLMKKYLDLAAEGSRFVLRQPSISAKGVENI 361
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ IA + T + + + + +
Sbjct: 362 ATAVTGVYLEIIAGAGEPKYEFTLAEEPVVDVPAGSIPIIMTADEKGSVNSGSGIYFKGV 421
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + + + + + ++ ++ S+ A
Sbjct: 422 RAGVVTGYRLEDSRVIFDAVIFKEFREIAVEGLYFWEADALKVRMSGEGVSIKTTPVAQI 481
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
L+ + + + + D + ++ +KI + D SS K
Sbjct: 482 LESAVKAGFFGARGKKPLERDTVLALYPDEDTAKEAYIAKQGIRKIYLITEDASSLAKGA 541
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + + + + I+ Q + + L SS KF
Sbjct: 542 PVLYKGFKVGELGNRFLDADTGKVRISAMIQPEYKKLVNDKTYFWKLGGSSVKFEG---- 597
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
E D + + + + + + S+G+ + + +
Sbjct: 598 -------SEIKVSAPDIKEIVLGGVE-FDNADAPLGSVGSVIYEDHTDAQKAVNAALS 647
>gi|194473369|emb|CAQ86607.1| virulence factor Mce family protein [Mycobacterium avium subsp.
paratuberculosis]
Length = 103
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 14/82 (17%), Positives = 33/82 (40%), Gaps = 6/82 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVG 70
F+ ++ F++ ++ + P E+ + S GL S V +NG+ +GR+
Sbjct: 24 FITVVVLAVIFTLVYI-QFRGGFTPKTELTML--ASRAGLVMDPGSKVTYNGVEIGRVGT 80
Query: 71 L-FLDQEYPNHSLAKALIRPDT 91
+ ++ + + P
Sbjct: 81 ISETVRDGKPAAKFTLEVYPRY 102
>gi|218752233|ref|ZP_03531029.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis GM 1503]
gi|289760713|ref|ZP_06520091.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis GM 1503]
gi|289708219|gb|EFD72235.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis GM 1503]
Length = 402
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 13/281 (4%)
Query: 12 LFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+F++++L L + +++P ++ L+T+S VR
Sbjct: 31 VFLLAVLLAPVVLTSCTWRGIANVPLPVGRGMGPDRMTIYVQMPDTLA-LNTNSRVRVAD 89
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L + + P L + TA I L G ++EL+
Sbjct: 90 VWVGTVRDISL---RNWIATLTLELEPTVRLPANATAKIGQTSLLGTQHVELAAPPIPSP 146
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + T I + +I+ ++
Sbjct: 147 QPLKSGDTIGLKNSSAYPTVERTLASVALILTGGGIVNLDVIQTEILNILDGHAGQIREF 206
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+E ++T A + + T N D + + +
Sbjct: 207 LERLATFTAELNNQRGDLTRAIDSTNQLLTIIANRNDTLDRVLTDVPSLIEHFADTGQLF 266
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + ++ + T ++ +T Q+ Q ++++
Sbjct: 267 ADATESLGRFSEVANRALAATRPNLHQTLQSLQRPLRQLER 307
>gi|317508873|ref|ZP_07966512.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316252834|gb|EFV12265.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 353
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 27/359 (7%), Positives = 82/359 (22%), Gaps = 16/359 (4%)
Query: 1 MESKNYYTSVG--LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+ + +G L ++ + L + + + GL S V
Sbjct: 1 MKLRLN---LGMTLILLVAIALFGTGYMALGVLHMGAVKKTTSVTLMLKKSGGLLPTSDV 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
G+ + + + I + + ++ + G YI+ +
Sbjct: 58 TMRGLRI---GRVTGVRTTTTGLTVSMEIDNEHNVPANSPVGVEALSAVGEQYIDFKPRK 114
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENI 172
+ A ++ AT S + S ++ + + + +
Sbjct: 115 IAPPYLADGAVIPAEQVTYRATLSDMLDRSSALFSAINPKDLDIIVKNIGEVLDGSDDMF 174
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ T + + + + + +L +
Sbjct: 175 SQLATDASVYAKLVRENKQLFEMLFGNVDFFAVQMRKLNANGLFKQMSNELSPNFFDNGA 234
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
I + + + + ++ + + + + L S +
Sbjct: 235 GIGQGVEVLYTDIAEGKWLTKDSTIETLVAKIREYLDLLSGPLSTFAPV--LESLTTPMR 292
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
K + + + + Q+ E + E
Sbjct: 293 NDKPDVGHWIDRWRAALDAEGHMRVRAPGEQAPQQDPEQSEDAEQQDEPPQHEASDLQE 351
>gi|215410134|ref|ZP_03418942.1| MCE family lipoprotein LprL [Mycobacterium tuberculosis 94_M4241A]
gi|298524080|ref|ZP_07011489.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|298493874|gb|EFI29168.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
Length = 402
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 13/281 (4%)
Query: 12 LFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+F++++L L + +++P ++ L+T+S VR
Sbjct: 31 VFLLAVLLAPVVLTSCTWRGIANVPLPVGRGMGPDRMTIYVQMPDTLA-LNTNSRVRVAD 89
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L + + P L + TA I L G ++EL+
Sbjct: 90 VWVGTVRDISL---RNWIATLTLELEPTVRLPANATAKIGQTSLLGTQHVELAAPLIPSP 146
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + T I + +I+ ++
Sbjct: 147 QPLKSGDTIGLKNSSAYPTVERTLASVALILTGGGIVNLDVIQTEILNILDGHAGQIREF 206
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+E ++T A + + T N D + + +
Sbjct: 207 LERLATFTAELNNQRGDLTRAIDSTNQLLTIIANRNDTLDRVLTDVPPLIEHFADTGQLF 266
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + ++ + T ++ +T Q+ Q ++++
Sbjct: 267 ADATESLGRFSEVANRALAATRPNLHQTLQSLQRPLRQLER 307
>gi|212715258|ref|ZP_03323386.1| hypothetical protein BIFCAT_00149 [Bifidobacterium catenulatum DSM
16992]
gi|212661939|gb|EEB22514.1| hypothetical protein BIFCAT_00149 [Bifidobacterium catenulatum DSM
16992]
Length = 730
Score = 48.0 bits (111), Expect = 0.003, Method: Composition-based stats.
Identities = 46/441 (10%), Positives = 123/441 (27%), Gaps = 22/441 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SVRFN-GI 63
V + +V+ L W + S + + + +G V+ + G
Sbjct: 19 IVSIIIVTGLVVIPGLFSWFNISASWNPFANTGNLKFAVANDDEG-YKSDLIPVKISIGD 77
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
V + L + + K T A + + + +
Sbjct: 78 QV--VNTLRANDQMDWTFTTKKEAIDGTKSGKYYAAVVIPKDFSTRMMTFFTADGDHATL 135
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR--HIQKIIENIEKPLTTTIA 181
+ ++N A E S+ ++ ++ Q E + T+
Sbjct: 136 TYYNNEKKNALAPKITGQGADTVAAQINEMFSETLTSTALSITSQLADELDKPESQATLT 195
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
N AN ++ + T S+ + + S +L++
Sbjct: 196 NFSNNMGNFANTLTDTSSALTTFSSLTLSAQNLLDSSNSLLSNVSDSAKNAGNELKQSKN 255
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK---MKSKETS 298
+ ++ + + +N+ + T + + ++ ++ +
Sbjct: 256 SINDLTGAVKTSTNALSTALNSSANSFGAVSTDIDSVFNNAGTQAGNTATALRNQAANVT 315
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
++ + + + + I + + LND + I+
Sbjct: 316 KQAQSYQNIYDALDELSNNNLMPEVAKIAIDHLKTNVGATITQLNDLANSLNTSADNIDT 375
Query: 359 ISALKEN-----NSLFKDAQRAMHTFRDTSE-KINRYIPSIGNNLQN---FSQSGLNDIQ 409
+ N L + A+ ++ + + ++ + I +++ N S D++
Sbjct: 376 KVSDTTADRERVNQLAQQAKASIDGIKTDFDSQLKPQLNDISDSISNTVTALSSTAADLK 435
Query: 410 NLVRKLQETVNHFDDCLNNFE 430
+ L T D L N
Sbjct: 436 GTLGDLNSTTKSADKQLTNIR 456
>gi|302525039|ref|ZP_07277381.1| predicted protein [Streptomyces sp. AA4]
gi|302433934|gb|EFL05750.1| predicted protein [Streptomyces sp. AA4]
Length = 424
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 45/140 (32%), Gaps = 11/140 (7%)
Query: 1 MESKNYYTSV---GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M + T V G+ ++ L + ++ V +R + L
Sbjct: 12 MNRRWRKTGVRTAGVLFLAALSAFVLLTVKI--YHKDFTTTIPVTLRADRVGNQLRAGGQ 69
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-L 114
V+ G+ VG I G+ + + P+ L + +A + + L G Y++
Sbjct: 70 VKARGVVVGEIRGVHAI---RGGAEISLALDPEQVKWLPVNVSALLVPKTLFGERYVQLS 126
Query: 115 STLRKEKKTIFQIATERNQR 134
K+ + R
Sbjct: 127 IPDTDRKRPLRAGDVIAQDR 146
>gi|297289124|ref|XP_001090393.2| PREDICTED: laminin subunit beta-1 [Macaca mulatta]
Length = 1786
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 72/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D D
Sbjct: 1442 QKAMDLDQDVLSALSEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEDLR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QQSAADIARAEMLLEEAKKASKSATDVKVTADMVKEALEEAEKAQVAAEKAIQQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1658
>gi|226366111|ref|YP_002783894.1| Mce family protein [Rhodococcus opacus B4]
gi|226244601|dbj|BAH54949.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 451
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 9/103 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIP--GSVDG--LSTDSSVRFNGIPVGRIVG 70
V L F +L+ + ++ I G ++ ++ V+ G+ VG +
Sbjct: 12 VLGLVFFLVLALFLAVTTGMFDKAFGTVVDIDVVTDSGGNSVAPEADVKVRGLIVGEVRS 71
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
I+PD + + TA + + L G Y
Sbjct: 72 ---ASSLEGEVTLALAIQPDKAPLIPSNATARLLPKTLFGERY 111
>gi|260582624|ref|ZP_05850413.1| paraquat-inducible protein B [Haemophilus influenzae NT127]
gi|260094296|gb|EEW78195.1| paraquat-inducible protein B [Haemophilus influenzae NT127]
Length = 881
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 30/122 (24%), Gaps = 2/122 (1%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPD 90
I+ LS S + + G+ VG + L+ + +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDRVLVHITIMPKYS 802
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ +T I + + + + + + + A P
Sbjct: 803 HLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRFL 862
Query: 151 AE 152
+
Sbjct: 863 LQ 864
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 8/93 (8%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE 76
+ +I + + I + G+ D + +R+ G+ +G + + +
Sbjct: 36 IALCIGAILFF---QIVKERGTSITITFT-NGSGIVADKTQIRYQGLQIGIVKEVHFT-D 90
Query: 77 YPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
A I P+ L +T + ++
Sbjct: 91 NLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
>gi|149911965|ref|ZP_01900562.1| paraquat-inducible protein B [Moritella sp. PE36]
gi|149804973|gb|EDM65003.1| paraquat-inducible protein B [Moritella sp. PE36]
Length = 904
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 38/398 (9%), Positives = 103/398 (25%), Gaps = 19/398 (4%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + IY + E+ + + +G+ + +++ G+ +G++ + L
Sbjct: 31 LLPIVAVLLGIYLM--YQSIAQAGIEIRVHF-DNANGIVEGKTLIKYQGLNIGKVKKIAL 87
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
D + A I L +T + I + T I
Sbjct: 88 D-DDLKGVYVTAEIDSKAEPVLRLNTQFWLVAPK----ASIAGISGLDALVTGNYINLLP 142
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + ++ + ++ + + E T+
Sbjct: 143 GDGEYSVEFDAVQTAPNTLPDDQGLIVRLTADKLASVRPGSEIFYKKIPVGQVHNFTLDK 202
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
+ ++ +S K+T + + +Q + +
Sbjct: 203 DTDQI---LIEAVIKEQYSYLVKDTSRFWNASGIHAEFGFDGVTIQTESLTAIISGALAF 259
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + N + E +I+ L++ + + + + T +
Sbjct: 260 DSPVDGNPAENNRAYNLYNNVSDAERAVEIEFNLANTNDIKIGNNIYLNGQQVGEITQVI 319
Query: 312 RS----SISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
I + + + L N + + N
Sbjct: 320 TQLIDAETQQTTPTAKAFADIDPEVVELLRAGTQFWVEKATL-SLSESKNVANLVTGNFI 378
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
LF + + T D ++ IP ++ +GL
Sbjct: 379 LFTPGKGELQTTFDLVSNVDDLIPHKQISISANDANGL 416
>gi|117618647|ref|YP_856787.1| paraquat-inducible protein B [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117560054|gb|ABK37002.1| paraquat-inducible protein B [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 850
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
GL S +R+ G+ +G+I + L+ + KA +
Sbjct: 625 GLGVGSPIRYRGVDIGKIEQIELEP-TLGQVIFKAELDGQY 664
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
L + IY Q+ + I +G+ + VR+ G+ +G + L L
Sbjct: 22 FIALLLAGGFIY-----QQFASSGQLIRINFAQ-GNGILPGKTQVRYQGVAIGVVQELEL 75
Query: 74 DQEYPN-HSLAKALIRPDTPLYPSTTATIRTQ 104
++ LAK R + + + +
Sbjct: 76 AEDGRKIAVLAKIDSRARPLIRKGSDFWLVSP 107
Score = 43.8 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 3/72 (4%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
SV+GLS S + F + VG + + L ++ + + A R
Sbjct: 728 SASVNGLSVGSPLLFRKMVVGSVTKVALARDGS---EVLIDVNVEQEYAHLVRANSRFWN 784
Query: 106 LAGITYIELSTL 117
++G+ T
Sbjct: 785 VSGVKADIGLTG 796
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
+ GL+ + + + G+ VG+I L LD
Sbjct: 388 DDLAGLNEGAPLWYKGLQVGQISQLTLDGGGNASVALVVQ 427
>gi|240170050|ref|ZP_04748709.1| MCE family lipoprotein LprN [Mycobacterium kansasii ATCC 12478]
Length = 386
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 42/125 (33%), Gaps = 8/125 (6%)
Query: 4 KNYYTSVGLFVVSILFFS---FFSI--YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
+ G+F + F + L + + + +P L +S V
Sbjct: 2 RRIMLRAGVFAAGTTLLAGCQFGGLNSLPLPGTAGHGDGAFTITAEMPDVAT-LPQNSPV 60
Query: 59 RFNGIPVGRIVGLFL--DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
+ + VG + G+ + ++ K + L ++TAT+ L G +++L
Sbjct: 61 MVDDVTVGSVAGIDAMQRPDGSFYAAVKLALDKQVVLPCNSTATVAQTSLLGSMHVDLVR 120
Query: 117 LRKEK 121
Sbjct: 121 PADHP 125
>gi|183984026|ref|YP_001852317.1| MCE family lipoprotein LprM [Mycobacterium marinum M]
gi|183177352|gb|ACC42462.1| MCE-family lipoprotein LprM_1 [Mycobacterium marinum M]
Length = 381
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + ++P VD + +S VR + VG + + H+L +
Sbjct: 37 LPGVQGGGPGSFTIQAQMPD-VDNIEPNSRVRVGDVNVGTVTKIE---RQGWHALVTMKL 92
Query: 88 RPDTPLYPSTTATIRTQGLAGI 109
+ L + TAT+ L G
Sbjct: 93 NGNVELPANATATLGQTSLLGS 114
>gi|118619131|ref|YP_907463.1| MCE family lipoprotein LprM [Mycobacterium ulcerans Agy99]
gi|118571241|gb|ABL05992.1| MCE-family lipoprotein LprM_1 [Mycobacterium ulcerans Agy99]
Length = 380
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 17/82 (20%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
L + ++P VD + +S VR + VG + + H+L +
Sbjct: 36 LPGVQGGGPGSFTIQAQMPD-VDNIEPNSRVRVGDVNVGTVTKIE---RQGWHALVTMKL 91
Query: 88 RPDTPLYPSTTATIRTQGLAGI 109
+ L + TAT+ L G
Sbjct: 92 NGNVELPANATATLGQTSLLGS 113
>gi|315442587|ref|YP_004075466.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260890|gb|ADT97631.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 400
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 31/100 (31%), Gaps = 9/100 (9%)
Query: 35 DGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD-- 90
P +V + P GL D+ V++ GI VG++ + + I D
Sbjct: 37 FTPTDKVTVLSPR--AGLVMDVDAKVKYRGIQVGKVESIEYAGN---AAKLTLAINRDDM 91
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ I + G +E + TE
Sbjct: 92 RYIPGDAPVRIGGTTIFGAKSVEFLAPEDPSGQPLRPGTE 131
>gi|194209474|ref|XP_001915354.1| PREDICTED: laminin, beta 1 [Equus caballus]
Length = 1711
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1367 QKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 1426
Query: 290 SKMKSKETSAFLENIA----------DSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+K ++ M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1427 DLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1486
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1487 QQSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDIQ 1546
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1547 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1583
>gi|120406146|ref|YP_955975.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119958964|gb|ABM15969.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 386
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 35/344 (10%), Positives = 95/344 (27%), Gaps = 14/344 (4%)
Query: 28 LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD--QEYPNHSLAKA 85
+ + + + +++P V L +S V + + VG + G+ + + +
Sbjct: 28 MPGTAGHGNGSYTISVQLPD-VSTLPQNSPVMVDDVTVGSVSGVDAVQRPDGTFFAELQL 86
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITY-----IELSTLRKEKKTIFQIATERNQRAMITAT 140
+ + L + TA + L G + + QI ER T
Sbjct: 87 SLDGNVKLPANATARVAQTSLLGSQHLELAAPADGSGTGTLAEGSQIPIERTGNYPTTEQ 146
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+ N N + ++ E +++ I
Sbjct: 147 VLSSLGVVVNKGNLGALQDITDETYNAVVGRSGTFADLIPRLAELTASLDRQTDDIIAAA 206
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ + SK++ D + +++ Q V+ ++ +
Sbjct: 207 EGLNRFAGILARSKDSLGRTLDTLPEALQVLNDNRAQIVDAFTALRSFATVASRVLQETK 266
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN------IADSTSNMRSS 314
+ D ++ + + D + D +L N + T+ +
Sbjct: 267 DDFAADFKDLFPVIKALNDNADFFIKDLEFLPTFPFHYKYLRNAVRGDYLNVYTTFDLTL 326
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ + + + + + + + A L + +
Sbjct: 327 RRVGESVFTTSLGLDPNMKRMSEVVNPPDFLTGAVANLSGQAAD 370
>gi|311264748|ref|XP_003130317.1| PREDICTED: laminin subunit beta-1 [Sus scrofa]
Length = 1751
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + ++ +K+D D
Sbjct: 1407 QKAMDFDQDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLLKANATKEKVDKSNEDLR 1466
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1467 NLIKQIRDFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1526
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1527 QQSAADIARAELLLEEAQRASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDIQ 1586
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1587 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1623
>gi|41406862|ref|NP_959698.1| hypothetical protein MAP0764 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395212|gb|AAS03081.1| hypothetical protein MAP_0764 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 426
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 30/304 (9%), Positives = 91/304 (29%), Gaps = 13/304 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQY-------DGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+F + + N GP A + +V + ++S V + +
Sbjct: 1 MFAIGCCVMVTATGCAFHGLNSLPLPGAVGRGPGANIYHVELPNVGTMESNSPVMIDDVV 60
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI--ELSTLRKEKK 122
VG + + + H+ + ++ D + + AT+ L G ++ ++
Sbjct: 61 VGSVGQMRVQG---WHADVEISVKRDVVVPANVVATVGQTSLLGSMHVELNTPLGQQGSG 117
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ AT R+ + + A + I +
Sbjct: 118 RLQPGATIPLSRSSAYPS-TEQTLSSLGAVVNGGGLGQIGEIIHNFSAALSGREGAVRDL 176
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
I + T + D ++ + Q + + + + +++ ++
Sbjct: 177 ITRLDTFVGTLDDQRDNIVDSIQALNRLAGTFAEQRDVVSQALQKVPPALDVLIKERPRL 236
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ ++ V ++ D+ + + + + + + +F + + + +
Sbjct: 237 TAALDKLRVFSNTATRLVNDSQADLVQNLKNLEPTIRALADVGPEFGTAIAAGFVFPLTQ 296
Query: 303 NIAD 306
N D
Sbjct: 297 NFVD 300
>gi|260914205|ref|ZP_05920678.1| paraquat-inducible protein B [Pasteurella dagmatis ATCC 43325]
gi|260631838|gb|EEX50016.1| paraquat-inducible protein B [Pasteurella dagmatis ATCC 43325]
Length = 884
Score = 47.6 bits (110), Expect = 0.004, Method: Composition-based stats.
Identities = 13/132 (9%), Positives = 40/132 (30%), Gaps = 4/132 (3%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
F++ + + +++ +++ ++T S V + G+ VG I L L+
Sbjct: 738 FTLLQSAPRSNKYTQGFPLVLETSDALN-ITTGSPVLYRGVEVGTIQKLSLNNLGDR-VF 795
Query: 83 AKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
+I + ++ I + ++ + + + +
Sbjct: 796 VHIVIDQKHKHLVRQNSEFWIASGYDLNVSLKGAEFNTGSVQQFLKGGVSFSTPSSTIIQ 855
Query: 141 PSGINYFISNAE 152
P +
Sbjct: 856 PQAKENQHFLLQ 867
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 14/102 (13%), Positives = 30/102 (29%), Gaps = 12/102 (11%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
+ + F+ + F + I + +GL + VR+
Sbjct: 26 RRISPFWLLPFIALCIGAILFF-------QIVQEQGYSIRITF-ANGEGLVAGKTQVRYQ 77
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
G+ +G + + A I P+ L +T +
Sbjct: 78 GLQIGVVKKVNFT-NDLKQVEVIANIYPEAKSVLRENTKFWL 118
>gi|119953748|ref|YP_950553.1| minor structural protein [Streptococcus phage SMP]
gi|118430560|gb|ABK91884.1| minor structural protein [Streptococcus phage SMP]
Length = 1161
Score = 47.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 37/394 (9%), Positives = 103/394 (26%), Gaps = 20/394 (5%)
Query: 56 SSVRFNGIPVG---RIV--GLFLDQEYPNHSLAKA--------LIRPDTPLYPSTTATIR 102
SSV G+ VG R+V LD + I+ + S A ++
Sbjct: 251 SSVYLRGVKVGDTIRVVRHDKKLDYDT-RIFEITFNRLNNQSSDIKLGDRIGESNEAKVQ 309
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
T + + + + + +
Sbjct: 310 TIADKAVEQFVNNEFSNFVQNLPDYLPSADGFNNNWYGVEDPTVKYPGKVLINDIWYKPD 369
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+ + + + + + + + + I
Sbjct: 370 PEHEGHKIMLRWTGEVWEEILRNYESESLRDRIAEEIAQVNQSMQAQAQEHDRQVADIFS 429
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
S++ + + + QV + + QV + Q D
Sbjct: 430 KTQSVESLANQAKSDAASALARANQVKTEAIADARAQVATVSQVLNTAKSELQSAIASAD 489
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
D + + + + R+ + ++ T +T+ + L
Sbjct: 490 QKARDSQASATALR-NDLNLQASKILEQARAQTALTNRVSTVETLADGTRSTVAELYKTL 548
Query: 343 NDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
N ++ + ++ ++ L + + ++ + ++ + INR + + + +
Sbjct: 549 NKATGDIDSVTNRTKSVEDNLSQTRAQYEHLTQTVNAQTGQIDSINRKTVDLQSGIDGVT 608
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
Q ++L + + D ++ N Q
Sbjct: 609 QR----FEDLQIGGNNLLKNTKDFSGEWDYNGQR 638
>gi|51244540|ref|YP_064424.1| hypothetical protein DP0688 [Desulfotalea psychrophila LSv54]
gi|50875577|emb|CAG35417.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
Length = 879
Score = 47.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 44 RIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATI 101
+ + GL T + V + GI +G + L L + + A L+ T T +
Sbjct: 648 VLFNDLGGLKTGAPVMYKGIEIGSVTKLNL-GKNLHSVSATLLVEEKTLPLFRQGTKIWL 706
Query: 102 RTQGLA 107
R +
Sbjct: 707 RQAQIN 712
Score = 43.8 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 10/98 (10%), Positives = 31/98 (31%), Gaps = 3/98 (3%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL- 73
+ + + L + Y +V + + ++ + V G+ +G + +
Sbjct: 18 ILPILALVICSWLL--YSSYKNAGIDVTVYFDDATGIIADKTLVMTRGVRIGIVTDIDPG 75
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
++ + K R + + + I L+
Sbjct: 76 LEDSKIKTTVKLDRRVEEKISKDSLFWIVKPELSVTKI 113
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 8/41 (19%), Positives = 15/41 (36%), Gaps = 1/41 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
L+ S V + + VG +V L + + + I
Sbjct: 768 LTPGSPVYYRQLQVGEVVSYALAKN-FENVEVRINIDDKYR 807
>gi|317508872|ref|ZP_07966511.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316252833|gb|EFV12264.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 734
Score = 47.6 bits (110), Expect = 0.005, Method: Composition-based stats.
Identities = 13/97 (13%), Positives = 27/97 (27%), Gaps = 3/97 (3%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
GL + V+ + VG + + P++ + D L + +
Sbjct: 51 TDSTGLYVGNKVKLLDLEVGEVTSIK---NMPDYVRIDFTVPKDLDLPADEGVVTMSDSI 107
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
++EL+ + A R S
Sbjct: 108 VTDRHLELTKPYADGPKFQGSACIGLDRTKTPVDISE 144
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 37/294 (12%), Positives = 80/294 (27%), Gaps = 10/294 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRS----NQYDGPMAEVIIRIPGSVDGLSTDS 56
M + L V + + + V I SV L+ +
Sbjct: 382 MRRRMTRVLTALAGVLAMGLTSACSLDPTEIPLPGTHIGDDSYSVNIEFS-SVLSLTAKA 440
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LS 115
V NG+ VG + + L ++A I L +T A +R + G YI +
Sbjct: 441 RVDSNGVQVGVLDHVQLTGNT---AVAVVNISTLVKLPQNTRAELRQATVLGDIYIALTT 497
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ T + + + +S+ S ++ S E + K
Sbjct: 498 PEDPSPTVLRNGDTIPLKNTAPPESMEDLLRSLSSLVTGS-SLTGLSDAFSSFHEVVGKD 556
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
T ++ L + +H + + D +
Sbjct: 557 PERTAELQGKLANTLHDLATHQQVLDQLVANADAVGAAAAAHAHTLDHLRDQLNADVTGL 616
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ I + + + + V ++ + + I + ++ S
Sbjct: 617 NRFNKSITQMLFDLDTIIRTVNPIADQLLPAVAQSALSIMPLIGAISTVDTNLS 670
>gi|149198078|ref|ZP_01875125.1| PqiB family protein [Lentisphaera araneosa HTCC2155]
gi|149138680|gb|EDM27086.1| PqiB family protein [Lentisphaera araneosa HTCC2155]
Length = 879
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 20/101 (19%), Positives = 43/101 (42%), Gaps = 15/101 (14%)
Query: 1 MESKN-------YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS 53
ME K Y V + + + + IY +D E++I S +GL+
Sbjct: 1 MEQKAVVKSKKPIYV-VWIIPIVAMAVAGLMIYK-----YFDDKGFEIVITF-DSGEGLT 53
Query: 54 TD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
D +++ +NGI +G++ G+ +++ A ++ +
Sbjct: 54 ADKTALVYNGIKIGQVTGVQVNKNDVTKVDATLMLEKKAAI 94
Score = 38.4 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L S V + I +G I L + + I P+
Sbjct: 763 LKVGSPVFYRQIKIGSIEAFKLSSDSTG-VEMRLFIDPNF 801
>gi|148825789|ref|YP_001290542.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
PittEE]
gi|148715949|gb|ABQ98159.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
PittEE]
Length = 881
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 30/122 (24%), Gaps = 2/122 (1%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPD 90
I+ LS S + + G+ VG + L+ + +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDRVLVHITIMPKYS 802
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ +T I + + + + + + + A P
Sbjct: 803 HLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRFL 862
Query: 151 AE 152
+
Sbjct: 863 LQ 864
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVIANINPEASNILRENTKFWLVQPNVS 123
>gi|145634476|ref|ZP_01790186.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
PittAA]
gi|145268456|gb|EDK08450.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
PittAA]
Length = 881
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 30/122 (24%), Gaps = 2/122 (1%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPD 90
I+ LS S + + G+ VG + L+ + +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDRVLVHITIMPKYS 802
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ +T I + + + + + + + A P
Sbjct: 803 HLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRFL 862
Query: 151 AE 152
+
Sbjct: 863 LQ 864
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
>gi|145633347|ref|ZP_01789078.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
3655]
gi|144986193|gb|EDJ92783.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
3655]
Length = 881
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 30/122 (24%), Gaps = 2/122 (1%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPD 90
I+ LS S + + G+ VG + L+ + +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDRVLVHITIMPKYS 802
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ +T I + + + + + + + A P
Sbjct: 803 HLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRFL 862
Query: 151 AE 152
+
Sbjct: 863 LQ 864
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|293690|gb|AAA39407.1| laminin B1 [Mus musculus]
Length = 1834
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 67/218 (30%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1490 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 1549
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN----------IT 339
+ +K ++ + ++ Q++ + I I
Sbjct: 1550 NLIKQIRNFLTEDSADLDSIEAVANEVLKSGNASTPQQLQNLTEDIRERVETLSQVEVIL 1609
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1610 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1669
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1670 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 1706
>gi|126367|sp|P02469|LAMB1_MOUSE RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1 chain;
AltName: Full=Laminin-1 subunit beta; AltName:
Full=Laminin-10 subunit beta; AltName: Full=Laminin-12
subunit beta; AltName: Full=Laminin-2 subunit beta;
AltName: Full=Laminin-6 subunit beta; AltName:
Full=Laminin-8 subunit beta; Flags: Precursor
Length = 1786
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 67/218 (30%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1442 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 1501
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN----------IT 339
+ +K ++ + ++ Q++ + I I
Sbjct: 1502 NLIKQIRNFLTEDSADLDSIEAVANEVLKSGNASTPQQLQNLTEDIRERVETLSQVEVIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 1658
>gi|309972935|gb|ADO96136.1| Conserved hypothetical protein [Haemophilus influenzae R2846]
Length = 881
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 30/122 (24%), Gaps = 2/122 (1%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPD 90
I+ LS S + + G+ VG + L+ + +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDRVLVHITIMPKYS 802
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ +T I + + + + + + + A P
Sbjct: 803 HLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRFL 862
Query: 151 AE 152
+
Sbjct: 863 LQ 864
Score = 40.3 bits (91), Expect = 0.70, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 32/107 (29%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITF-ANGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVIANINPEASNILREDTKFWLVQPNVS 123
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|169631638|ref|YP_001705287.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243605|emb|CAM64633.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 402
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 15/84 (17%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + ++ L + V+ G +G + + ++ IR D +
Sbjct: 39 GGSYGLTAVFT-NILNLPARAKVKLGGADIGEVDSMS---TANYTAVVTMRIRSDVEIPK 94
Query: 96 STTATIRTQGLAGITYIELSTLRK 119
TT +RT G ++ L R
Sbjct: 95 RTTVELRTATPLGDVFVALKPPRP 118
>gi|157375626|ref|YP_001474226.1| virulence factor MCE-like protein [Shewanella sediminis HAW-EB3]
gi|157318000|gb|ABV37098.1| mammalian cell entry related domain protein [Shewanella sediminis
HAW-EB3]
Length = 874
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL EV I P S G+ + VR+ G+ VG++V + +D +
Sbjct: 23 LVALALGGWLG-IKSIKEAGIEVQIHFP-SATGIDIGKTLVRYQGLTVGKVVDISID-DD 79
Query: 78 PNHSLAKALIR 88
+
Sbjct: 80 LKGVNVDLKMD 90
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 8/60 (13%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Query: 52 LSTDSSVRFNGIPVGRIVGLF-LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ S V + + +GR+ + L + T + P++ +
Sbjct: 523 LNPGSPVYYKKMQIGRVDSIDWLSGSEAFSIRVSIQNQFKTLIKPNSVFWRNSAMSVNAA 582
>gi|311744211|ref|ZP_07718015.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311312384|gb|EFQ82297.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 378
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 19/108 (17%), Positives = 29/108 (26%), Gaps = 11/108 (10%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD--SSVRFNGIPV 65
GL + + + V+ GL VR G V
Sbjct: 17 LVAGLVSIVSIALLIGLSIAIYDKRFTTSTTVTVMA----DKAGLQLARFGDVRVYGALV 72
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
G++ + D E ++ + PD L I L G Y
Sbjct: 73 GQVRSIESDGE---QAVITLALEPDAARNLPSDLDVRILPTTLFGQHY 117
>gi|308231595|ref|ZP_07413035.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu001]
gi|308369997|ref|ZP_07419909.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu002]
gi|308370456|ref|ZP_07421558.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu003]
gi|308371715|ref|ZP_07425930.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu004]
gi|308373530|ref|ZP_07432674.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu005]
gi|308374051|ref|ZP_07434644.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu006]
gi|308377472|ref|ZP_07479270.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu009]
gi|308379822|ref|ZP_07487695.2| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu011]
gi|308395902|ref|ZP_07492202.2| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis SUMu012]
gi|308216596|gb|EFO75995.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu001]
gi|308325667|gb|EFP14518.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu002]
gi|308331902|gb|EFP20753.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu003]
gi|308335689|gb|EFP24540.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu004]
gi|308337268|gb|EFP26119.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu005]
gi|308343193|gb|EFP32044.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu006]
gi|308355637|gb|EFP44488.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu009]
gi|308363520|gb|EFP52371.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu011]
gi|308367203|gb|EFP56054.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis SUMu012]
gi|323720946|gb|EGB30011.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis CDC1551A]
Length = 380
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 13/281 (4%)
Query: 12 LFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+F++++L L + +++P ++ L+T+S VR
Sbjct: 9 VFLLAVLLAPVVLTSCTWRGIANVPLPVGRGMGPDRMTIYVQMPDTLA-LNTNSRVRVAD 67
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L + + P L + TA I L G ++EL+
Sbjct: 68 VWVGTVRDISL---RNWIATLTLELEPTVRLPANATAKIGQTSLLGTQHVELAAPPIPSP 124
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + T I + +I+ ++
Sbjct: 125 QPLKSGDTIGLKNSSAYPTVERTLASVALILTGGGIVNLDVIQTEILNILDGHAGQIREF 184
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+E ++T A + + T N D + + +
Sbjct: 185 LERLATFTAELNNQRGDLTRAIDSTNQLLTIIANRNDTLDRVLTDVPPLIEHFADTGQLF 244
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + ++ + T ++ +T Q+ Q ++++
Sbjct: 245 ADATESLGRFSEVANRALAATRPNLHQTLQSLQRPLRQLER 285
>gi|304413484|ref|ZP_07394957.1| paraquat-inducible protein B [Candidatus Regiella insecticola LSR1]
gi|304284327|gb|EFL92720.1| paraquat-inducible protein B [Candidatus Regiella insecticola LSR1]
Length = 440
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 37/104 (35%), Gaps = 12/104 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ ++ S N + E+ I S G+ + +R+ G
Sbjct: 21 RISPFWLLPFIALLIAGSLVY-------NNWQQRGVEITIDF-QSAAGIVAGRTPIRYQG 72
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ VG + + L + + KA I+ + L T + T
Sbjct: 73 VDVGGVQSVNLT-DNLSKIEVKANIKNELKDQLLSGTQFWLVTP 115
>gi|254820121|ref|ZP_05225122.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 400
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 20/60 (33%), Gaps = 5/60 (8%)
Query: 54 TDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
V G+ VGR+ + + I PD + + A I+ L G Y
Sbjct: 3 PGGKVMLRGVQVGRVASVT---GGTEPVSLQLEIDPDQVRNIPANIEAQIKASTLFGSKY 59
>gi|183983843|ref|YP_001852134.1| Mce family protein, Mce5E [Mycobacterium marinum M]
gi|183177169|gb|ACC42279.1| Mce family protein, Mce5E [Mycobacterium marinum M]
Length = 401
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ +++ L ++ V+ G VG++ + ++ + I D L
Sbjct: 36 LGSGGYTLTAVFADALN-LPMNAKVKLAGADVGQVESM---VARNYTAVTRLRITDDVRL 91
Query: 94 YPSTTATIRTQGLAGITY 111
+TA +RT G +
Sbjct: 92 PRGSTAELRTATPLGDVF 109
>gi|118619252|ref|YP_907584.1| MCE-family protein Mce4A [Mycobacterium ulcerans Agy99]
gi|118571362|gb|ABL06113.1| MCE-family protein Mce4A [Mycobacterium ulcerans Agy99]
Length = 400
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNH 80
P V++ P GL + V++ GI VG + ++ +
Sbjct: 25 GIALTYLSYTSAFTPTDTVVVSSPR--AGLVMEKGAKVKYRGIQVGTVEDIYYSGD---Q 79
Query: 81 SLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
+ K IR + + T I + G
Sbjct: 80 ARLKLAIRSAEMHFIPSNATVHIAGNTIFGAK 111
>gi|291391313|ref|XP_002712162.1| PREDICTED: laminin, beta 1 [Oryctolagus cuniculus]
Length = 1744
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/218 (11%), Positives = 71/218 (32%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + + +K+D D
Sbjct: 1400 QKAMDFDRDVLSALAEVEQLSKMVSEAKQRADEAKQNAQGVLLKTNATKEKVDKSNEDLR 1459
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1460 NLIKQIRDFLTQDSADLDSIEAVANEVLKMEMPSTPEQLQNLTEDIRERVESLSQVEVIL 1519
Query: 340 SNLNDSSQKFAELMSKINNISALK-ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + A+ + + ++Q
Sbjct: 1520 QQSAADIARAEMLLEEAKRASKSATDVKVTADTVKEALEEAEKAQIAAEKALKQADEDIQ 1579
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1580 G-TQNLLTSIESETAASEETLFNASQRISELERNMEEL 1616
>gi|254822341|ref|ZP_05227342.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 137
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 16/87 (18%), Positives = 32/87 (36%), Gaps = 7/87 (8%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEYPNHSLAKAL 86
+ P E+ + S GL S V +NG+ +GR+ + ++ +
Sbjct: 32 QFRGGFTPKTELTML--ASRAGLVMDPGSKVTYNGVEIGRVGKIAETVRDGKPAAKFTLE 89
Query: 87 IRPDT--PLYPSTTATIRTQGLAGITY 111
+ P + + A I+ + G Y
Sbjct: 90 VYPRYLALIPSNVNADIKATTVFGGKY 116
>gi|145629237|ref|ZP_01785036.1| hypothetical protein CGSHi22121_10555 [Haemophilus influenzae
22.1-21]
gi|144978740|gb|EDJ88463.1| hypothetical protein CGSHi22121_10555 [Haemophilus influenzae
22.1-21]
Length = 548
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 411 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 468
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 469 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 528
Query: 150 NAE 152
+
Sbjct: 529 LLQ 531
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 306 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 355
>gi|229845078|ref|ZP_04465214.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
6P18H1]
gi|229812050|gb|EEP47743.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
6P18H1]
Length = 881
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 12/122 (9%), Positives = 30/122 (24%), Gaps = 2/122 (1%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPD 90
I+ LS S + + G+ VG + L+ + +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDRVLVHITIMPKYS 802
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ +T I + + + + + + + A P
Sbjct: 803 HLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRFL 862
Query: 151 AE 152
+
Sbjct: 863 LQ 864
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 32/107 (29%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVIANINPEASNILREDTKFWLVQPNVS 123
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|325272195|ref|ZP_08138618.1| mce-related protein [Pseudomonas sp. TJI-51]
gi|324102661|gb|EGC00085.1| mce-related protein [Pseudomonas sp. TJI-51]
Length = 766
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 2 ESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSV 58
+++ + ++++ + + L + + Y E+ +R S DG+ + + V
Sbjct: 8 KTRPASNWSAIWILPLIALMIGGWLAWQA-----YRQAGVEIEVRF-ESGDGIVANKTEV 61
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDT--PLYPSTTATI 101
+ G+PVG++ L LD E N +A + D L T +
Sbjct: 62 IYKGMPVGKVKSLVLDAEGENQGVIATIEMNKDAEPHLTKGTRFWL 107
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 7/94 (7%), Positives = 24/94 (25%), Gaps = 1/94 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + + + + + S+
Sbjct: 400 VLFADTLGSLEVGSPVMYRQVKVGSVQSYQFARNSNRILIGVHIEKEYEKLVNGSSRFWN 459
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ + + +T+ +
Sbjct: 460 ASGITLTGGLSGIKVKSESLQTLMAGGIAFDTPR 493
Score = 43.4 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 21/111 (18%), Positives = 36/111 (32%), Gaps = 1/111 (0%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAK 84
+ L S + +I DGL +++RF G+ VG I + L + A+
Sbjct: 505 FRLHESQEAVNRAGTLITIRVDRADGLKPGTAIRFRGLDVGSIESVDLTNDLQAVLLRAR 564
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ T + + L TL + Q AT+
Sbjct: 565 ITEAANRIARAGTQFWVVKPAFGLVRTENLDTLVTGQYLEVQPATKDRGPQ 615
Score = 39.9 bits (90), Expect = 0.91, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 34/135 (25%), Gaps = 3/135 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L+ DS V + I VGR+ L ++ + K I P + T +
Sbjct: 170 LNRDSPVFYKQIQVGRVKSYRLSEDQ-STVEVKIFIEPAYASLVRKHTRFWNASGVSIDA 228
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ + + +I +P R K+
Sbjct: 229 SLSGVKVRSESLSSIVAGGIAFATPEYRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKLT 288
Query: 170 ENIEKPLTTTIANIE 184
+ T +
Sbjct: 289 DYEGLQAGRTPVMYK 303
>gi|170087748|ref|XP_001875097.1| hypothetical protein LACBIDRAFT_305228 [Laccaria bicolor S238N-H82]
gi|164650297|gb|EDR14538.1| hypothetical protein LACBIDRAFT_305228 [Laccaria bicolor S238N-H82]
Length = 1682
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 21/200 (10%), Positives = 69/200 (34%), Gaps = 8/200 (4%)
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+LEN + +++++V + D+R +E+ ++ + K + +
Sbjct: 786 LLENGKELGGALKEANERVGKIMSDLRNANAQTKELEDELTQSDARIDELQKRAKEDQEV 845
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE-LMSKINNIS 360
I+ + + A+ + +++ ++ E + E + + I
Sbjct: 846 --ISGLEDELNNQSDAVASERAKNKQLEDVLHEAEEELGATKAYVNELEEGASAAVEQIE 903
Query: 361 ALKENNSLFKDAQRAMHTFRDTSE----KINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L+E + + +M + + + + + L++ + + +
Sbjct: 904 KLEEELAAAHETVESMENAEEQASIHMKNLEED-AEKAREVARQMEEALDEAERKMLADE 962
Query: 417 ETVNHFDDCLNNFERNPQDI 436
E + +++ ER Q +
Sbjct: 963 EALADLKVKVDSLEREKQRL 982
>gi|326915931|ref|XP_003204265.1| PREDICTED: laminin subunit alpha-2-like, partial [Meleagris
gallopavo]
Length = 1405
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 30/218 (13%), Positives = 72/218 (33%), Gaps = 8/218 (3%)
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ K+ + V+ NN + + ++ QE ++ + + +
Sbjct: 49 MNKIREANYLSAVNKNNLTMVEKKKQAVEDGRQGVEKSLQEGNDILNEANNLTNDINIAV 108
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
E + + S S+ Q + + + EN + LN+SS ++++
Sbjct: 109 EYVESVADKIQSMSDQLKDKIDDLSQEIQDKMLPEKVLQAENHAAQLNESSAILDGILAE 168
Query: 356 INNIS--------ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
N+S A +A++ R + + + +L++ ++S L
Sbjct: 169 AKNLSFNATLAFNAYTNIKDYIDEAEKVAKEARALANEAMQATSGPQGSLKDDAKSSLQK 228
Query: 408 IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSV 445
+ N + +N E + EK S+
Sbjct: 229 SIRVFNDAMVLENDVKEKEDNLESMQNRLKDADEKNSI 266
>gi|312137897|ref|YP_004005233.1| mce family protein mce1a [Rhodococcus equi 103S]
gi|311887236|emb|CBH46545.1| putative Mce family protein Mce1A [Rhodococcus equi 103S]
Length = 393
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
L + Q EV++ IP S GL + VR++G+ VGRI G+ S+ +
Sbjct: 29 MVLRGTGQLHRDP-EVLVAIPASA-GLVNGEAPVRYSGVDVGRIAGID---SGTESSVVR 83
Query: 85 ALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
I D+ + + A + + G YI+
Sbjct: 84 LRIDSDSIDLIPAAVLARVVPRTFFGDIYIQ 114
>gi|325673332|ref|ZP_08153024.1| MCE family protein [Rhodococcus equi ATCC 33707]
gi|325555922|gb|EGD25592.1| MCE family protein [Rhodococcus equi ATCC 33707]
Length = 346
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 33/311 (10%), Positives = 76/311 (24%), Gaps = 7/311 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYW-LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ G V + L + L G V +++ DGL T + VR N
Sbjct: 2 RRAAVVVGGALVGAALVAGCGAGIQDLPLGRSVPGDTYTVHVQLAH-ADGLLTGADVR-N 59
Query: 62 GIP-VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G VGR+ L ++ + L + + G +I L +
Sbjct: 60 GQRVVGRVSDLS---TDTVGAIVDLNLSSSVALPENVEVAVELPSALGSPFIRLRAPEQP 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T + ++
Sbjct: 117 STEMLADGDVIAESRTEVGPQIESALAALGTILTGSGFDQLQTVLDELNVAFAGRPRQVR 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T++T+ +SH + ++ S D + + + + +
Sbjct: 177 DLLGTVTTLTGTAMSHRQEFDTAMELAADISRRFAAQQQTIDQFLDIAPEVTNVLVGQRE 236
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+I + S+ + + V + + + +
Sbjct: 237 RISTLLDSSAALAGHLDFVLSQASTGLDAMLGDTATVLASLSSFNASIGETLTTMNGFLD 296
Query: 301 LENIADSTSNM 311
A +
Sbjct: 297 NFGGAVEGDYL 307
>gi|118619039|ref|YP_907371.1| Mce family protein, Mce5E [Mycobacterium ulcerans Agy99]
gi|118571149|gb|ABL05900.1| Mce family protein, Mce5E [Mycobacterium ulcerans Agy99]
Length = 401
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 13/78 (16%), Positives = 29/78 (37%), Gaps = 4/78 (5%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ +++ L ++ V+ G VG++ + ++ + I D L
Sbjct: 36 LGSGGYTLTAVFADALN-LPMNAKVKLAGADVGQVESM---VARNYTAVTRLRITDDVRL 91
Query: 94 YPSTTATIRTQGLAGITY 111
+TA +RT G +
Sbjct: 92 PRGSTAELRTATPLGDVF 109
>gi|145639172|ref|ZP_01794779.1| hypothetical protein CGSHiII_04019 [Haemophilus influenzae PittII]
gi|145271734|gb|EDK11644.1| hypothetical protein CGSHiII_04019 [Haemophilus influenzae PittII]
Length = 881
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 802 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 861
Query: 150 NAE 152
+
Sbjct: 862 LLQ 864
Score = 39.5 bits (89), Expect = 0.99, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.4 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|296394448|ref|YP_003659332.1| mammalian cell entry-like domain-containing protein [Segniliparus
rotundus DSM 44985]
gi|296181595|gb|ADG98501.1| Mammalian cell entry related domain protein [Segniliparus rotundus
DSM 44985]
Length = 348
Score = 47.2 bits (109), Expect = 0.005, Method: Composition-based stats.
Identities = 16/88 (18%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ SV L + V NG+ VG + + LD + H + + +
Sbjct: 40 GGYQIKAVFK-SVLNLPDRAKVVSNGVRVGYLESVSLDPDT-GHVTTTLRLMQGAQIPVN 97
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTI 124
+ IR L G T++ + + + +
Sbjct: 98 ASVQIRQSTLFGDTFLSVISPPGDTSGL 125
>gi|309750752|gb|ADO80736.1| Conserved hypothetical protein [Haemophilus influenzae R2866]
Length = 881
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 802 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 861
Query: 150 NAE 152
+
Sbjct: 862 LLQ 864
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITF-ANGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|145637701|ref|ZP_01793354.1| hypothetical protein CGSHiHH_01981 [Haemophilus influenzae PittHH]
gi|145269103|gb|EDK09053.1| hypothetical protein CGSHiHH_01981 [Haemophilus influenzae PittHH]
Length = 881
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 802 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 861
Query: 150 NAE 152
+
Sbjct: 862 LLQ 864
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPSY 688
>gi|16273559|ref|NP_439814.1| hypothetical protein HI1672 [Haemophilus influenzae Rd KW20]
gi|260581265|ref|ZP_05849083.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
gi|1176069|sp|P44288|Y1672_HAEIN RecName: Full=Uncharacterized protein HI_1672
gi|1574522|gb|AAC23317.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092092|gb|EEW76037.1| conserved hypothetical protein [Haemophilus influenzae RdAW]
Length = 881
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 802 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 861
Query: 150 NAE 152
+
Sbjct: 862 LLQ 864
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|325673331|ref|ZP_08153023.1| hypothetical protein HMPREF0724_10805 [Rhodococcus equi ATCC 33707]
gi|325555921|gb|EGD25591.1| hypothetical protein HMPREF0724_10805 [Rhodococcus equi ATCC 33707]
Length = 403
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 19/127 (14%), Positives = 49/127 (38%), Gaps = 3/127 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ + LF ++ F I +++ + P + + + GL+ +SV + G
Sbjct: 2 RRVVLVQLVLFAITAAVVVPFGIAYVAGPGAFRDP-IRLHANMS-NALGLNAGTSVTYRG 59
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG++V + L + + + + T + + A + +AGI +++
Sbjct: 60 VQVGKVVSVVLVPDRGG-ARIEFDLDAGTRIPRDSIAKVGMGTVAGIQSVDIFPNTDTGP 118
Query: 123 TIFQIAT 129
+
Sbjct: 119 FLADGDE 125
>gi|301170428|emb|CBW30034.1| conserved protein [Haemophilus influenzae 10810]
Length = 881
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 802 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 861
Query: 150 NAE 152
+
Sbjct: 862 LLQ 864
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITF-ANGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|229494133|ref|ZP_04387896.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318495|gb|EEN84353.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 407
Score = 47.2 bits (109), Expect = 0.006, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 41/128 (32%), Gaps = 4/128 (3%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
L S ++ + +P + GL + + VR++G+ VGRI + + +
Sbjct: 30 MVLRGSGNL-EQSTDIFVAVPATA-GLISGEAPVRYHGVNVGRIGEIE-SGTAESVVQLQ 86
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + A + + G Y++L E+ + +
Sbjct: 87 IQTDDASKIPADVVARVVPRTFFGDIYMQLVDSPNEQGQTSLSDGDEIHMDDGPEAVALY 146
Query: 145 NYFISNAE 152
+ +
Sbjct: 147 DVYTKLVG 154
>gi|319896891|ref|YP_004135086.1| hypothetical protein HIBPF05710 [Haemophilus influenzae F3031]
gi|317432395|emb|CBY80750.1| conserved protein [Haemophilus influenzae F3031]
Length = 881
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 802 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 861
Query: 150 NAE 152
+
Sbjct: 862 LLQ 864
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|71282399|ref|YP_271182.1| mce family protein [Colwellia psychrerythraea 34H]
gi|71148139|gb|AAZ28612.1| mce family protein [Colwellia psychrerythraea 34H]
Length = 157
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 2/119 (1%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK VG FV L ++ S + + ++ GL S ++
Sbjct: 1 MVSKKVELLVGFFVALGLAALLMLSLKVADSGIGGNGESYQLFAKFDNIGGLKVRSPIKV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLR 118
G+ VGR+ + LD+E I +T+ I T GL G Y+ +
Sbjct: 61 GGVVVGRVSDISLDEEDYTPV-VTLEIYTQYNKFSEATSVAILTAGLLGEQYLGVQPGF 118
>gi|296165088|ref|ZP_06847641.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295899581|gb|EFG79034.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 454
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 25/286 (8%), Positives = 75/286 (26%), Gaps = 7/286 (2%)
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
G+ VG + + + + + +A + L I+L K
Sbjct: 2 GVRVGSVDKIEPAGD---KMKVTFHYDNKYKVPANASAVVVNPTLVASRSIQLEPPYKGG 58
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ A +R + P+ + + N K+ + + + +A
Sbjct: 59 PVMGNNAVIPIERTQV---PTEWDELRESVANIISKLGPTPEQPKGPFGEAIESFADGLA 115
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSK-NTFNTITDLITSLDKMIKAIDLQKVN 240
+++S ++ + + F + Q +
Sbjct: 116 GKGKQINTTLDSLSRSLTALNEGRGDFFAVVRSLAQFVNALHKDDRQFVALNKNLAQFTD 175
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
++ + + +N + + + + + + +L +
Sbjct: 176 ELTGSDRDLANALRQFDGLLSTLRPFLSKNREVLAHDVDNLANLTTTLVQPDPLNGLETA 235
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
L + +N+ I + N ++ + S + S
Sbjct: 236 LHVLPTLETNLSQIYHPSHGAVMSIPAIPNFANPMQFMCSMIQAGS 281
>gi|229846903|ref|ZP_04467010.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
7P49H1]
gi|229810392|gb|EEP46111.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
7P49H1]
Length = 881
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 802 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 861
Query: 150 NAE 152
+
Sbjct: 862 LLQ 864
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|257054988|ref|YP_003132820.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
gi|256584860|gb|ACU95993.1| virulence factor Mce family protein [Saccharomonospora viridis DSM
43017]
Length = 425
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 35/130 (26%), Gaps = 16/130 (12%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVD--------G--LSTDSSVRFNGIPVGRIVG 70
+ L D + SV G L +S V+ G+ VG +
Sbjct: 13 LAGVAFCLVLVLLVDLSVRVYNKEFTESVSVTLRTDHVGNQLRQNSDVKARGVLVGEVRA 72
Query: 71 LFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQI 127
+ + + PD L TA + + L G Y++ +
Sbjct: 73 IRAVP---GGAEIDLALEPDAVSRLPKDVTALLVPKTLFGERYVQLSIPDDSTAAPLSDG 129
Query: 128 ATERNQRAMI 137
R+
Sbjct: 130 DVITQDRSRN 139
>gi|167624294|ref|YP_001674588.1| hypothetical protein Shal_2370 [Shewanella halifaxensis HAW-EB4]
gi|167354316|gb|ABZ76929.1| Mammalian cell entry related domain protein [Shewanella
halifaxensis HAW-EB4]
Length = 876
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 16/85 (18%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEY 77
+ WL EV I P S G+ + V++ G+ VG++V + +D +
Sbjct: 23 IIALALGAWLG-VKSIRESGIEVTIHFP-SATGMDIGKTLVKYQGLTVGKVVDMSIDDDL 80
Query: 78 PNH-SLAKALIRPDTPLYPSTTATI 101
R + T +
Sbjct: 81 QGVNVDVIMDYRAAPFVNEGTKFWL 105
>gi|68250272|ref|YP_249384.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
86-028NP]
gi|68058471|gb|AAX88724.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
86-028NP]
Length = 881
Score = 46.9 bits (108), Expect = 0.006, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 744 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 802 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 861
Query: 150 NAE 152
+
Sbjct: 862 LLQ 864
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
>gi|167841441|ref|ZP_02468125.1| Mammalian cell entry related domain protein [Burkholderia
thailandensis MSMB43]
Length = 518
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 46/161 (28%), Gaps = 3/161 (1%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE---YPNHSLAKALIRPDT 91
DGP A V++R S GL + V F+G+ +G I G+ + + + ++ I P
Sbjct: 272 DGPAASVLMRFAASSRGLFVGAPVDFHGVEIGEITGIAVAFDIARQRSETVVTTNIYPAR 331
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
A AG + + + + +R + +
Sbjct: 332 LGKGYRRALGNGDNAAGRGLLRDLVEQGLRGQLRVGNQLTEKRYIALDFFPHATPVNIDT 391
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ ++ + + +
Sbjct: 392 HHAMVELPTVPNMFDSLRNQLAGIGDRLGHFPVDEVGHHFD 432
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 41 VIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
V +R + +G + VR+ G+ +GR+ L + + LA + + + + A
Sbjct: 33 VTVRFV-NAEGFEPGKTIVRYRGVEIGRLTALNISADRTR-VLAVLRLDGNATRFTTCDA 90
Query: 100 T 100
Sbjct: 91 R 91
>gi|291230048|ref|XP_002734982.1| PREDICTED: restin-like [Saccoglossus kowalevskii]
Length = 1112
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 50/383 (13%), Positives = 114/383 (29%), Gaps = 15/383 (3%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
GL V +G +G L + D L + A +AG
Sbjct: 150 GLKVGDRVLVSGTKLGT---LRYVGTTEFAKGEWCGVELDDELGKNDGA------VAGTR 200
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
Y I ++ + + A +TP +++TS S SS
Sbjct: 201 YFTCKARHGLFAPIHKVTRAKGKAAKPPSTPMESTSKDKRSDSTSSVSSVSSLSSLSRSI 260
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
T+ E + + T + DS T D
Sbjct: 261 GHGSVELTSPREKELKKQAETELAALRALHEKYVKDTDGNQDSLRTLVEAADREKVELSQ 320
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ +KV + ++ ++ + + + E Q+ L +
Sbjct: 321 QLEEERRKVEDLQFRLEEAAISKDDLKAASQQELQRIHTLEDRLVEENQRATKLQMEVDG 380
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + I I ++ + + I +E+ ++ ++
Sbjct: 381 FKN--VMENKDFKLTELEMEALTYIEQIEDLQKKFKAAEDKILLLESSKLKDSELGEEIK 438
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG--NNLQNFSQSGLNDI 408
+ ++KI + + SL D T E++ + + + + QS L
Sbjct: 439 QHINKIKEL--ELQVLSLSNDKTEVQTTLSQVREELQDSVAARKKLESTVDGLQSKLKGS 496
Query: 409 QNLVRKLQETVNHFDDCLNNFER 431
++ + + + V++ + L++ +R
Sbjct: 497 ESTMENMDKEVHNLKNSLSDLQR 519
>gi|226364097|ref|YP_002781879.1| Mce family protein [Rhodococcus opacus B4]
gi|226242586|dbj|BAH52934.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 379
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 33/312 (10%), Positives = 90/312 (28%), Gaps = 9/312 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFS-----IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD 55
M + +++ ++ + + I + G A + + L +
Sbjct: 1 MTNSIRRSALTATMLVGVVAAAAGCRFDGINSIGLPGNVVGGDAHEVTVELADIQNLVGN 60
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
S V+ N + VG I + D + I P+ + + +A + + G Y+EL+
Sbjct: 61 SPVKANNVIVGNISHITGD---NWGAKLTLEIDPEAEIPANVSAKLAQTSVLGSQYLELT 117
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK-ISDSSRHIQKIIENIEK 174
+ + + PS + A + + ++ +
Sbjct: 118 VPPGVEAVGALADGDVIPLDRTSQYPSTEEVLSALALVLNGSGLQQIRTVTSELNRVLGG 177
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + + + D ++ + N D + + I
Sbjct: 178 REESLRSLFGNLEEFVGGVDQQRDDIVRAIDGLDRLGAELASQNQTIDRGITSIQPAMQI 237
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
++ Q+ + ++ + ++ D+ ++ Q V ++ +K
Sbjct: 238 LDEQQKQLTTMLNDVGRFGEVATKVLESSRDDLDANLRSLQPVLSQLTAAGDHLPEALKI 297
Query: 295 KETSAFLENIAD 306
T F
Sbjct: 298 AATVPFPVTTTQ 309
>gi|24213307|ref|NP_710788.1| MCE-like protein [Leptospira interrogans serovar Lai str. 56601]
gi|45658799|ref|YP_002885.1| hypothetical protein LIC12972 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|24194047|gb|AAN47806.1| MCE-related protein [Leptospira interrogans serovar Lai str. 56601]
gi|45602043|gb|AAS71522.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 266
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 16/121 (13%), Positives = 40/121 (33%), Gaps = 18/121 (14%)
Query: 14 VVSILFFSFFSIY-----WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V++ + F + ++ D + I P ++G+ + VR G+ G +
Sbjct: 9 VLTGIVFFLAFSLSMYVSVIEKAGTKDEYPYTMKIYYPR-LEGIHPGAPVRILGVEKGIV 67
Query: 69 VGLF------------LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
L L+++ ++ L+ + T +T + I++
Sbjct: 68 RSLDVVPIDEVEDQRFLNKDQTKAIEIIVRLKEPITLWDNYKITFQTNTILSGRTIDIDP 127
Query: 117 L 117
Sbjct: 128 G 128
>gi|320354765|ref|YP_004196104.1| Mammalian cell entry related domain-containing protein
[Desulfobulbus propionicus DSM 2032]
gi|320123267|gb|ADW18813.1| Mammalian cell entry related domain protein [Desulfobulbus
propionicus DSM 2032]
Length = 904
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 19/139 (13%), Positives = 37/139 (26%), Gaps = 7/139 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + L ++ + G++ + V GIPVG + L +
Sbjct: 17 ILPLVALCIGAWLLH--TSMKEAGIDIYVHF-EDATGITPGKTKVIVRGIPVGTVKKLNI 73
Query: 74 DQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
D+ +L + L T I ++ L TL +
Sbjct: 74 DEGMKGVNLV-INMDNQVRFALVEDTAFWIVKPEVSAGRISGLDTLFGGSYIGMRQGKST 132
Query: 132 NQRAMITATPSGINYFISN 150
P + +
Sbjct: 133 TLANHFQGLPEQPSVDSTT 151
Score = 46.5 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 20/158 (12%), Positives = 39/158 (24%), Gaps = 5/158 (3%)
Query: 7 YTSVGLFVVS--ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGI 63
G F+ + L + P + I + + G L S V + I
Sbjct: 722 AVITGAFIDVRTGMGALQTEFSVLPLAEDTFKPATGLNIVLETATLGSLKQGSPVYYRQI 781
Query: 64 PVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQG-LAGITYIELSTLRKEK 121
VGR+ G L +Y T + ++G ++ +
Sbjct: 782 KVGRVTGYRLSPTAQQVWLEVNIEPDYTKLIYSGTRFYNASGIKVSGSVLSGMTMRTESM 841
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
+++ P T +
Sbjct: 842 ESVLAGGIGLATPEGTEMGPPAYPGQHFQVSETVDEAW 879
Score = 43.4 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 2/77 (2%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLAK 84
+ S+ + + + P S +GL+T + +R+ GI +G++ L LD A
Sbjct: 632 LFASQQEALNADALRLTLHFP-SGEGLATATEIRYQGITIGKVTDLSLDPASGDIRGEAS 690
Query: 85 ALIRPDTPLYPSTTATI 101
STT +
Sbjct: 691 VDREMARLFRKSTTLRL 707
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
P + P S GL+ + V + I VG I GL L + L + LI
Sbjct: 389 RPGIAFTLVAPDS-GGLTVGAPVLYKQITVGEITGLALAPKG-EQVLVRVLI 438
>gi|312137901|ref|YP_004005237.1| mce family lipoprotein mce1e [Rhodococcus equi 103S]
gi|311887240|emb|CBH46549.1| putative Mce family lipoprotein Mce1E [Rhodococcus equi 103S]
Length = 346
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 33/311 (10%), Positives = 77/311 (24%), Gaps = 7/311 (2%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYW-LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ G V ++L + L G V +++ DGL T + VR N
Sbjct: 2 RRAAVVVGGALVGAVLVAGCGAGIQDLPLGRTVPGDTYTVHVQLAH-ADGLLTGADVR-N 59
Query: 62 GIP-VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G VGR+ L ++ + L + + G +I L +
Sbjct: 60 GQRVVGRVSDLS---TDTVGAIVDLNLSSSVALPENVEVAVELPSALGSPFIRLRAPEQP 116
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + T + ++
Sbjct: 117 STEMLADGDVIAESRTEVGPQIESALAALGTILTGSGFDQLQTVLDELNVAFAGRPRQVR 176
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
+ T++T+ +SH + ++ S D + + + + +
Sbjct: 177 DLLGTVTTLTGTAMSHRQEFDTAMELAADISRRFAAQQQTIDQFLDIAPEVTNVLVGQRE 236
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
+I + S+ + + V + + + +
Sbjct: 237 RISTLLDSSAALAGHLDFVLSQASTGLDAMLGDTATVLASLSSFNASIGETLTTMNGFLD 296
Query: 301 LENIADSTSNM 311
A +
Sbjct: 297 NFGGAVEGDYL 307
>gi|167969016|ref|ZP_02551293.1| MCE-family lipoprotein lprL (MCE-family lipoprotein mce2e)
[Mycobacterium tuberculosis H37Ra]
gi|260199597|ref|ZP_05767088.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis T46]
Length = 372
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 34/281 (12%), Positives = 84/281 (29%), Gaps = 13/281 (4%)
Query: 12 LFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+F++++L L + +++P ++ L+T+S VR
Sbjct: 1 MFLLAVLLAPVVLTSCTWRGIANVPLPVGRGMGPDRMTIYVQMPDTLA-LNTNSRVRVAD 59
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L + + P L + TA I L G ++EL+
Sbjct: 60 VWVGTVRDISL---RNWIATLTLELEPTVRLPANATAKIGQTSLLGTQHVELAAPPIPSP 116
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + T I + +I+ ++
Sbjct: 117 QPLKSGDTIGLKNSSAYPTVERTLASVALILTGGGIVNLDVIQTEILNILDGHAGQIREF 176
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+E ++T A + + T N D + + +
Sbjct: 177 LERLATFTAELNNQRGDLTRAIDSTNQLLTIIANRNDTLDRVLTDVPPLIEHFADTGQLF 236
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + ++ + T ++ +T Q+ Q ++++
Sbjct: 237 ADATESLGRFSEVANRALAATRPNLHQTLQSLQRPLRQLER 277
>gi|31791775|ref|NP_854268.1| MCE-family lipoprotein LprL [Mycobacterium bovis AF2122/97]
gi|31617362|emb|CAD93471.1| POSSIBLE MCE-FAMILY LIPOPROTEIN LPRL (MCE-FAMILY LIPOPROTEIN MCE2E)
[Mycobacterium bovis AF2122/97]
Length = 188
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 40/109 (36%), Gaps = 13/109 (11%)
Query: 12 LFVVSILFFSFFSI--YW-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+F++++L W L + +++P ++ L+T+S VR
Sbjct: 31 VFLLAVLLAPVVLTSCTWRGIANVPLPVGRGMGPDRMTIYVQMPDTLA-LNTNSRVRVAD 89
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ VG + + L + + P L + TA I L G +
Sbjct: 90 VWVGTVRDISL---RNWIATLTLELEPTVRLPANATAKIGQTSLLGTQH 135
>gi|269837614|ref|YP_003319842.1| V-type H(+)-translocating pyrophosphatase [Sphaerobacter
thermophilus DSM 20745]
gi|269786877|gb|ACZ39020.1| V-type H(+)-translocating pyrophosphatase [Sphaerobacter
thermophilus DSM 20745]
Length = 687
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 51/441 (11%), Positives = 107/441 (24%), Gaps = 38/441 (8%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPG-------SV------- 49
+ YT V + V I I W + G A G +V
Sbjct: 55 RRQYTLVAIVAVVITLLLGLLINWSTAIGFVVGATASAAAGFIGMSVAVRSNVRTAEAAK 114
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP-----STTATIRTQ 104
GL+ V F G G + GLF+ I D + ++ +
Sbjct: 115 SGLAPALKVAFRG---GTVTGLFVVGLGLLAVAVFYAITRDVAPLVGLGFGGSLISVFAR 171
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
GI + E + R + + A + +
Sbjct: 172 IGGGIYTKAADVGTDLVGKVEAGIPEDDPRNPGVIADNVGDNVGDCAGMAADLFETYAVT 231
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ T A + + A+ + I S + +I
Sbjct: 232 AVAAMLLGHLVFDTETAVVYPLVLGAASIFTSIIGTFFVRLGNNGSIMRALYQGVVAAVI 291
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + + + Q + S + T +
Sbjct: 292 LAAVAFFPLTLWLMGDNPIISDQPV--SLFGLSFSLSATAKLFLSAIVGIIVTMGVVIIT 349
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
S + + A T+ + ++R I I +T+ D
Sbjct: 350 EYYTSERYGPVKHIAEASETGHGTNIIAGLAVSMRSTALPIVLISVAIYVAYRLTAVPGD 409
Query: 345 SSQ-------------KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ A ++ I++ + +N + + R ++ ++ +
Sbjct: 410 LTAGLYGIAVAAMAMLSMAGIIVAIDSFGPITDNAGGIAEMAELPDSVRAVTDPLDA-VG 468
Query: 392 SIGNNLQNFSQSGLNDIQNLV 412
+ + G + LV
Sbjct: 469 NTTKAVTKAYAIGSAGLAALV 489
>gi|254549549|ref|ZP_05139996.1| MCE-family lipoprotein mce2E [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
Length = 372
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 35/281 (12%), Positives = 85/281 (30%), Gaps = 13/281 (4%)
Query: 12 LFVVSILFFSFFSI---------YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+F++++L L + +++P ++ L+T+S VR
Sbjct: 1 MFLLAVLLAPVVLTSCTWRGIANVPLPVGRGMGPDRMTIYVQMPDTLA-LNTNSRVRVAD 59
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ VG + + L + + P L + TA I L G ++EL+
Sbjct: 60 VWVGTVRDISL---RNWIATLTLELEPTVRLPANATAKIGQTSLLGTQHVELAAPPIPSP 116
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ + T I + +I+ ++
Sbjct: 117 QPLKSGDTIGLKNSSAYPTVERTLASVALILTGGGIVNLDVIQTEILNILDGHAGQIREF 176
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+E ++T A + + T N D + + +
Sbjct: 177 LERLATFTAELNNQRGDLTRAIDSTNQLLTIIANRNDTLDRVLTDVPPLIEHFADTGQLF 236
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ I+ ++ + T ++ +T Q+ Q ++++
Sbjct: 237 ADAIESLGRFSEVANRALAATRPNLHQTLQSLQRPLRQLER 277
>gi|319776082|ref|YP_004138570.1| hypothetical protein HICON_14310 [Haemophilus influenzae F3047]
gi|329123245|ref|ZP_08251813.1| paraquat-inducible protein B [Haemophilus aegyptius ATCC 11116]
gi|317450673|emb|CBY86893.1| conserved protein [Haemophilus influenzae F3047]
gi|327471454|gb|EGF16902.1| paraquat-inducible protein B [Haemophilus aegyptius ATCC 11116]
Length = 883
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 14/123 (11%), Positives = 31/123 (25%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 746 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 803
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A P
Sbjct: 804 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQPQAQPNKRF 863
Query: 150 NAE 152
+
Sbjct: 864 LLQ 866
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISAFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 688
>gi|226304399|ref|YP_002764357.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183514|dbj|BAH31618.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 407
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 41/128 (32%), Gaps = 4/128 (3%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
L S ++ + +P + GL + + VR++G+ VGRI + + +
Sbjct: 30 MVLRGSGNL-EQSTDIFVAVPATA-GLISGEAPVRYHGVNVGRIGEIE-SGTAESVVQLQ 86
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + A + + G Y++L E+ + +
Sbjct: 87 IQTDDASKIPADVVARVVPRTFFGDIYMQLVDSPNEQGQTTLSDGDEIHMDDGPEAVALY 146
Query: 145 NYFISNAE 152
+ +
Sbjct: 147 DVYTKLVG 154
>gi|218891828|ref|YP_002440695.1| paraquat-inducible protein B [Pseudomonas aeruginosa LESB58]
gi|218772054|emb|CAW27833.1| paraquat-inducible protein B [Pseudomonas aeruginosa LESB58]
Length = 764
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQG 105
+ DGL + +RF G+ +G+I + L+ + A+ + T +
Sbjct: 521 DNADGLREGTPIRFKGLDIGKIESVELNPDLSGVLMKARLTSAGERVARSGTRFWVVRPA 580
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + L TL ++ +R
Sbjct: 581 LGLLRTENLGTLVSGPYIEALPSSTPGERQARFQ 614
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
++V+ ++ + + WL YD + +R S DG+ + V + GI VG++V
Sbjct: 15 IWVLPLVALAIGA--WLG-WRAYDQAGVLIQVRFESS-DGIQVKKTEVLYKGIAVGKVVA 70
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
L + ++ +A + + L T +
Sbjct: 71 LDVSEDIKG-VVATIEMDKEARQYLSKGTRFWL 102
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L S V + I VG++ L + K I P
Sbjct: 166 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAY 204
Score = 39.9 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 6/92 (6%), Positives = 24/92 (26%), Gaps = 1/92 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 395 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 454
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + +T+ +
Sbjct: 455 SSGITLTGNLSGVQVKSESLQTLITGGISFDT 486
>gi|254240641|ref|ZP_04933963.1| paraquat-inducible protein B [Pseudomonas aeruginosa 2192]
gi|126194019|gb|EAZ58082.1| paraquat-inducible protein B [Pseudomonas aeruginosa 2192]
Length = 767
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQG 105
+ DGL + +RF G+ +G+I + L+ + A+ + T +
Sbjct: 524 DNADGLREGTPIRFKGLDIGKIESVELNPDLSGVLMKARLTSAGERVARSGTRFWVVRPA 583
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + L TL ++ +R
Sbjct: 584 LGLLRTENLGTLVSGPYIEALPSSTPGERQARFQ 617
Score = 44.5 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS-TDSSVRFNGIPVGRIVG 70
++V+ ++ + + WL YD + +R S DG+ + V + GI VG++V
Sbjct: 18 IWVLPLVALAIGA--WLG-WRAYDQAGVLIQVRFESS-DGIQAKKTEVLYKGIAVGKVVA 73
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
L + ++ +A + + L T +
Sbjct: 74 LDVSEDIKG-VVATIEMDKEARQYLSKGTRFWL 105
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L S V + I VG++ L + K I P
Sbjct: 169 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAY 207
Score = 39.9 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 6/92 (6%), Positives = 24/92 (26%), Gaps = 1/92 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 398 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 457
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + +T+ +
Sbjct: 458 SSGITLTGNLSGVQVKSESLQTLITGGISFDT 489
>gi|116050152|ref|YP_791031.1| paraquat-inducible protein B [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585373|gb|ABJ11388.1| paraquat-inducible protein B [Pseudomonas aeruginosa UCBPP-PA14]
Length = 767
Score = 46.9 bits (108), Expect = 0.007, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQG 105
+ DGL + +RF G+ +G+I + L+ + A+ + T +
Sbjct: 524 DNADGLREGTPIRFKGLDIGKIESVELNPDLSGVLMKARLTSAGERVARSGTRFWVVRPA 583
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + L TL ++ +R
Sbjct: 584 LGLLRTENLGTLVSGPYIEALPSSTPGERQARFQ 617
Score = 44.5 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS-TDSSVRFNGIPVGRIVG 70
++V+ ++ + + WL YD + +R S DG+ + V + GI VG++V
Sbjct: 18 IWVLPLVALAIGA--WLG-WRAYDQAGVLIQVRFESS-DGIQAKKTEVLYKGIAVGKVVA 73
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
L + ++ +A + + L T +
Sbjct: 74 LDVSEDIKG-VVATIEMDKEARQYLSKGTRFWL 105
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L S V + I VG++ L + K I P
Sbjct: 169 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAY 207
Score = 39.9 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 6/92 (6%), Positives = 24/92 (26%), Gaps = 1/92 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 398 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 457
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + +T+ +
Sbjct: 458 SSGITLTGNLSGVQVKSESLQTLITGGISFDT 489
>gi|325673336|ref|ZP_08153028.1| MCE family protein [Rhodococcus equi ATCC 33707]
gi|325555926|gb|EGD25596.1| MCE family protein [Rhodococcus equi ATCC 33707]
Length = 393
Score = 46.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 8/91 (8%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
L + Q EV++ IP S GL + VR++G+ VGRI G+ S+ +
Sbjct: 29 MVLRGTGQLHRDP-EVLVAIPPSA-GLVNGEAPVRYSGVDVGRIAGID---SGTESSVVR 83
Query: 85 ALIRPDTP--LYPSTTATIRTQGLAGITYIE 113
I D+ + + A + + G YI+
Sbjct: 84 LRIDSDSIDLIPAAVLARVVPRTFFGDIYIQ 114
>gi|70732556|ref|YP_262319.1| PqiB family protein [Pseudomonas fluorescens Pf-5]
gi|68346855|gb|AAY94461.1| PqiB family protein [Pseudomonas fluorescens Pf-5]
Length = 767
Score = 46.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
++V+ ++ WL Y E+ +R S +G+ + + V + G+PVG++
Sbjct: 18 IWVLPLIALIIGG--WLG-WRAYSQTGIEIQLRF-ESGEGIQANKTEVVYKGMPVGKVKT 73
Query: 71 LFLDQEYPNH-SLAKALIRPDTP--LYPSTTATI 101
L LD E + +A + D L +T +
Sbjct: 74 LALDDEGNSKGVIATVEMNKDVEQYLKTNTRFWL 107
Score = 41.5 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 16/59 (27%), Gaps = 1/59 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTAT 100
+ ++ L S + + + VG + + + + ST
Sbjct: 400 VLFTDNLGSLDVGSPILYKQVKVGSVQSYQFSHTRKQLVIGVHIEKEYEGLVNGSTRFW 458
Score = 41.5 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 19/103 (18%), Positives = 34/103 (33%), Gaps = 1/103 (0%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYP 95
++ DGL + VRF G+ VG++ + L + A+ P+
Sbjct: 517 QRGTLVSIKVDRADGLRAGTPVRFKGLDVGKLEEVTLSADMQSVMLKARITEVPERIARV 576
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ + L + L TL + Q AT+
Sbjct: 577 GSQFWVVKPELGLMKTSNLETLVTGQYIEVQPATKSQGVQTSF 619
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 17/117 (14%), Positives = 32/117 (27%), Gaps = 8/117 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L V + + VG++ G L + + L LI P + G+ +
Sbjct: 647 LKVGVPVTYREVAVGKVTGYEL-GQTADRVLIHILIEPKYAPLVRSGTRFWNSSGFGVDF 705
Query: 112 IELSTLRKEKKTIFQI-------ATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+++ + AT +R A P E +
Sbjct: 706 GLFKGATVRTESLETLIQGGIAFATPDGERMGNPARPQQTFPLFDKFEEEWLTWAPK 762
>gi|297681283|ref|XP_002818388.1| PREDICTED: LOW QUALITY PROTEIN: laminin subunit beta-1-like [Pongo
abelii]
Length = 1786
Score = 46.9 bits (108), Expect = 0.008, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 72/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 1442 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEIIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QQSAADIARAEMLLEEAKKASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1658
>gi|329942976|ref|ZP_08291750.1| mce related family protein [Chlamydophila psittaci Cal10]
gi|313848133|emb|CBY17134.1| putative ABC transporter component [Chlamydophila psittaci RD1]
gi|325507111|gb|ADZ18749.1| putative ABC transporter, periplasmic substrate-binding protein
[Chlamydophila psittaci 6BC]
gi|328814523|gb|EGF84513.1| mce related family protein [Chlamydophila psittaci Cal10]
gi|328914808|gb|AEB55641.1| ABC transporter, periplasmic substrate-binding protein, putative
[Chlamydophila psittaci 6BC]
Length = 267
Score = 46.5 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 15/115 (13%), Positives = 35/115 (30%), Gaps = 11/115 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+F+ + F + + +S E+ + + G+S +V G +G +
Sbjct: 12 GVFLCVGILGLFSVMLFTPKSRGDGKQ--EIHVAFTH-LSGVSKGMNVCLAGKIIGSVAS 68
Query: 71 --------LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ D I LY + + + G + + +
Sbjct: 69 VHNIMDKGISRDSGQLYCYELVLKIDSGIALYKDDIFAMYSPKIIGESIVNIIPG 123
>gi|134098922|ref|YP_001104583.1| secreted protein [Saccharopolyspora erythraea NRRL 2338]
gi|291009384|ref|ZP_06567357.1| secreted protein [Saccharopolyspora erythraea NRRL 2338]
gi|133911545|emb|CAM01658.1| secreted protein [Saccharopolyspora erythraea NRRL 2338]
Length = 404
Score = 46.5 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 51/137 (37%), Gaps = 9/137 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + GL + IL + + + P++ V++R + + ++ V+
Sbjct: 1 MSRLATQFA-GLVFMVILALLLWFAV--AVYEKRFTPVSTVMLRTDRIGNQMELNAEVKA 57
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIELS-TL 117
G+P G + + + + + + L + +A + + L G Y++L
Sbjct: 58 RGVPFGTVRAVRTSGDG---AEIELAMDTARIGRLPSNVSARLVPKTLFGERYVDLVLPA 114
Query: 118 RKEKKTIFQIATERNQR 134
+++ + T R
Sbjct: 115 EPDRRALAAGDTITQDR 131
>gi|107101646|ref|ZP_01365564.1| hypothetical protein PaerPA_01002690 [Pseudomonas aeruginosa PACS2]
Length = 748
Score = 46.5 bits (107), Expect = 0.008, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQG 105
+ DGL + +RF G+ +G+I + L+ + A+ + T +
Sbjct: 505 DNADGLREGTPIRFKGLDIGKIESVELNPDLSGVLMKARLTSAGERVARSGTRFWVVRPA 564
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
L + L TL ++ +R
Sbjct: 565 LGLLRTENLGTLVSGPYIEALPSSTPGERQARFQ 598
Score = 43.4 bits (99), Expect = 0.085, Method: Composition-based stats.
Identities = 18/86 (20%), Positives = 33/86 (38%), Gaps = 6/86 (6%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS-TDSSVRFNGIPVGRIVGLFLDQEY 77
+ WL YD + +R S DG+ + V + GI VG++V L + ++
Sbjct: 4 LVALAIGAWLG-WRAYDQAGVLIQVRFESS-DGIQAKKTEVLYKGIAVGKVVALDVSEDI 61
Query: 78 PNHSLAKALIRPDTP--LYPSTTATI 101
+A + + L T +
Sbjct: 62 KG-VVATIEMDKEARQYLSKGTRFWL 86
Score = 39.9 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 14/40 (35%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
L S V + I VG++ L + K I P
Sbjct: 150 LEQGSPVFYRQIQVGQVKSFQL-GDDQRTIEIKVHIEPAY 188
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 6/92 (6%), Positives = 24/92 (26%), Gaps = 1/92 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 379 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 438
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + +T+ +
Sbjct: 439 SSGITLTGNLSGVQVKSESLQTLITGGISFDT 470
>gi|296394452|ref|YP_003659336.1| mammalian cell entry-like domain-containing protein [Segniliparus
rotundus DSM 44985]
gi|296181599|gb|ADG98505.1| Mammalian cell entry related domain protein [Segniliparus rotundus
DSM 44985]
Length = 422
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 31/85 (36%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+ + +GLS + V++ G+ +G++ + H + L
Sbjct: 43 FTKTFRIQVETTNIGEGLSVGADVKYRGLIIGKVESIDTRGITHQHMWLTLDAKQAQGLR 102
Query: 95 PSTTATIRTQGLAGITYIELSTLRK 119
T+A ++ + G IEL +
Sbjct: 103 GITSAKYQSSNIFGAPAIELLSGNS 127
>gi|330985457|gb|EGH83560.1| PqiB family protein [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331008243|gb|EGH88300.1| PqiB family protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 109
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 30/102 (29%), Gaps = 2/102 (1%)
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
E+ +N +A M + + G L S +
Sbjct: 1 MQEIAGNLNGSLDEAHKTFKLFNA-DVMPELHTVLGQSQSTMEMAGAALAEDSPV-RQQV 58
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ ++Q T + RNP+ ++ GR + V P
Sbjct: 59 NRTMDEVQRTDRSVRVLTDYISRNPEALIRGRTRQDVPSVYP 100
>gi|294638446|ref|ZP_06716666.1| mce related protein [Edwardsiella tarda ATCC 23685]
gi|291088452|gb|EFE21013.1| mce related protein [Edwardsiella tarda ATCC 23685]
Length = 567
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 4/59 (6%)
Query: 49 VDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
GL + VRF G+ VG + + + + I+ L T +
Sbjct: 1 APGLVAGRTPVRFQGVEVGTVSKVSVTPD-LRAVEVTLNIQRSMQHTLRQGTQFWLVNP 58
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 21/54 (38%), Gaps = 1/54 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
G+ VR GI VG+I G L + A T ++ + + ++
Sbjct: 349 GIEVGQPVRLKGIRVGQISGRELQDDGVRF-TALIAAPYRTAIHGDSRFVVNSR 401
>gi|145222152|ref|YP_001132830.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315442591|ref|YP_004075470.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|145214638|gb|ABP44042.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|315260894|gb|ADT97635.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 386
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 18/116 (15%), Positives = 41/116 (35%), Gaps = 9/116 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFS--FFSIYWLSRSNQYDGPMAEVIIRIP-GSVDGLSTDSS 57
M + +G+ V++L F + L+ + + V L +S
Sbjct: 1 MIRR----VLGVSSVALLLSGCQFGGLNSLNMPGTAGHGSGSFDVSVQLPDVSTLPQNSP 56
Query: 58 VRFNGIPVGRIVGLFLD--QEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
V + + VG + G+ ++ + + + + L + TA + L G +
Sbjct: 57 VMVDDVTVGSVSGVEAVQREDGTFFAEVQLSLDGNVKLPANATAKVAQTSLLGSQH 112
>gi|145225116|ref|YP_001135794.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145217602|gb|ABP47006.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 395
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 24/283 (8%), Positives = 78/283 (27%), Gaps = 7/283 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS--V 58
M ++ +GL +L + + V + GL D+ V
Sbjct: 1 MTTRPGRPLIGLAT--VLALAAVIAVAVGLFRGSFTSTVPVTVLSQR--AGLVMDADAKV 56
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTL 117
+++G VG + + + + I + + G Y+E +
Sbjct: 57 KWHGAQVGSVESIESLPDGRASIQLAMDPSYMGIIPSDVRVDIASSTVFGSKYVELVPPA 116
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + K++ + + ++ +
Sbjct: 117 EPSTQALRAGQVLTADHVTVEINTVFEQLSHVLGKIEPAKLNQTLGALGTALDGRGDQIG 176
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
T+ + + + ++ +++ + + T + +
Sbjct: 177 QTMVDFDAFLAQIEPSLPALERELALAPTVVGTYAEVAPQLVDTLDAATTISDTLVAEQG 236
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
++ +L ++ S+ + + DV E ++ +
Sbjct: 237 NLDSLLVSVIGLSDIGNEVVGGNRQAITDVMELLIPTTDLLNQ 279
>gi|41410186|ref|NP_963022.1| LprL [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41399020|gb|AAS06638.1| LprL [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 379
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 14 VVSILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+V L S W L G + +++P ++ L+T+S VR + VG
Sbjct: 12 LVVALAAMLTSCTWRGIADVPLPVGRGTGGDHMTIYVQMPDTLA-LNTNSRVRVADVWVG 70
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + L + + + P L + TA I L G +
Sbjct: 71 TVRAITL---KDWVATLRLDLDPGVRLPANATAKIGQTSLLGTQH 112
>gi|330829686|ref|YP_004392638.1| paraquat-inducible protein B [Aeromonas veronii B565]
gi|328804822|gb|AEB50021.1| Paraquat-inducible protein B [Aeromonas veronii B565]
Length = 850
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
GL S +R+ G+ +G+I + L+ + KA +
Sbjct: 625 GLGIGSPIRYRGVDIGKIEEIELEP-SLGQVIFKAELDGHY 664
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 3/70 (4%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
SV+GLS S + F + VG + + L ++ + D A R ++
Sbjct: 730 SVNGLSVGSPLLFRKMVVGSVTKVALARDGS---EVVIDVNVDQEYAHLVRANSRFWNVS 786
Query: 108 GITYIELSTL 117
G+ T
Sbjct: 787 GVKADIGLTG 796
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 18/47 (38%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+ GL+ D+ V + G+ VGRI L LD L
Sbjct: 388 DDLAGLNQDAPVWYKGLQVGRISQLTLDARGNASVELVMAPNYGHLL 434
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 9/58 (15%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 50 DGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+G+ + VR+ G+ +G + L L ++ A I + + + +
Sbjct: 51 NGILPGKTQVRYQGVAIGVVQELELAEDG-RKIAVMAKIDSRARPLIRKGSDFWLVSP 107
Score = 38.4 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
G DG+ S V + G+ G++ L +E + I
Sbjct: 507 GQADGIGIGSPVLYLGLEAGKVKQLRAAKEG---VEIELEID 545
>gi|262165706|ref|ZP_06033443.1| paraquat-inducible protein B [Vibrio mimicus VM223]
gi|262025422|gb|EEY44090.1| paraquat-inducible protein B [Vibrio mimicus VM223]
Length = 878
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 39/128 (30%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + V + I VG+++ + L E+ + + I P L
Sbjct: 747 GKTYTLQSETRGSVS---VGTPVLYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 802
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + +++ + + P+ +
Sbjct: 803 RENSVFWNVSGLDMSIGITGANVKAGTFESMLRGGITFSTPEQKHLPPAAPEGHTFYLYS 862
Query: 154 TSKKISDS 161
+++
Sbjct: 863 QAQEEWTK 870
Score = 44.5 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ GL + + + G+ VG + + L + + LI
Sbjct: 405 DNSFGLDVGTPILYRGVAVGSVTAVNLKFD---YVELNILIDEQY 446
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 42/156 (26%), Gaps = 4/156 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ + V++ G+P+G I + D E A I P S A TQ
Sbjct: 649 GVKVGTPVQYQGVPIGEIFEVIPDFESD-FVRLSARIEPQY---ASKIAKQNTQFWLSQA 704
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
I LS + + + + + + +R +
Sbjct: 705 KIGLSGIENVQNLLGHSIEVQPGTGESRFEFELHKEARHGGAGKTYTLQSETRGSVSVGT 764
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ I+ A+ + ++
Sbjct: 765 PVLYRDIEVGKVIDVRLGEFADRVITTIRIAPQYTY 800
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMVLAGWLVFKA-----VHDAGVRIQIHF-ENAQGLIAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SEGLDSIYVEADIYPEATKLLSTQTRFWM 111
>gi|262171480|ref|ZP_06039158.1| paraquat-inducible protein B [Vibrio mimicus MB-451]
gi|261892556|gb|EEY38542.1| paraquat-inducible protein B [Vibrio mimicus MB-451]
Length = 878
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 39/128 (30%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + V + I VG+++ + L E+ + + I P L
Sbjct: 747 GKTYTLQSETRGSVS---VGTPVLYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 802
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + +++ + + P+ +
Sbjct: 803 RENSVFWNVSGLDMSIGITGANVKAGTFESMLRGGITFSTPEQKHLPPAAPEGHTFYLYS 862
Query: 154 TSKKISDS 161
+++
Sbjct: 863 QAQEEWTK 870
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 405 DNSFGLDVGTPILYRGVAVGSVTAVNLKFDY---------VELNVLIDEQYGALIRSQN 454
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 42/156 (26%), Gaps = 4/156 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ + V++ G+P+G I + D E A I P S A TQ
Sbjct: 649 GVKVGTPVQYQGVPIGEIFEVIPDFESD-FVKLSARIEPQY---ASKIAKQNTQFWLSQA 704
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
I LS + + + + + + +R +
Sbjct: 705 KIGLSGIENVQNLLGHSIEVQPGTGESRFEFELHKEARHGGAGKTYTLQSETRGSVSVGT 764
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ I+ A+ + ++
Sbjct: 765 PVLYRDIEVGKVIDVRLGEFADRVITTIRIAPQYTY 800
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMVLAGWLVFKA-----VHDAGVRIQIHF-ENAQGLIAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SEGLDSIYVEADIYPEATKLLSTQTRFWM 111
>gi|258622868|ref|ZP_05717884.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258584807|gb|EEW09540.1| conserved hypothetical protein [Vibrio mimicus VM573]
Length = 878
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 39/128 (30%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + V + I VG+++ + L E+ + + I P L
Sbjct: 747 GKTYTLQSETRGSVS---VGTPVLYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 802
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + +++ + + P+ +
Sbjct: 803 RENSVFWNVSGLDMSIGITGANVKAGTFESMLRGGITFSTPEQKHLPPAAPEGHTFYLYS 862
Query: 154 TSKKISDS 161
+++
Sbjct: 863 QAQEEWTK 870
Score = 44.2 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 405 DNSFGLDVGTPILYRGVAVGSVTAVNLKFDY---------VELNVLIDEQYGALIRSQN 454
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 42/156 (26%), Gaps = 4/156 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ + V++ G+P+G I + D E A I P S A TQ
Sbjct: 649 GVKVGTPVQYQGVPIGEIFEVIPDFESD-FVKLSARIEPQY---ASKIAKQNTQFWLSQA 704
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
I LS + + + + + + +R +
Sbjct: 705 KIGLSGIENVQNLLGHSIEVQPGTGESRFEFELHKEARHGGAGKTYTLQSETRGSVSVGT 764
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ I+ A+ + ++
Sbjct: 765 PVLYRDIEVGKVIDVRLGEFADRVITTIRIAPQYTY 800
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMVLAGWLVFKA-----VHDAGVRIQIHF-ENAQGLIAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SEGLDSIYVEADIYPEATKLLSTQTRFWM 111
>gi|258625051|ref|ZP_05719972.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258582684|gb|EEW07512.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 878
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 39/128 (30%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + V + I VG+++ + L E+ + + I P L
Sbjct: 747 GKTYTLQSETRGSVS---VGTPVLYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 802
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + +++ + + P+ +
Sbjct: 803 RENSVFWNVSGLDMSIGITGANVKAGTFESMLRGGITFSTPEQKHLPPAAPEGHTFYLYS 862
Query: 154 TSKKISDS 161
+++
Sbjct: 863 QAQEEWTK 870
Score = 44.2 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 405 DNSFGLDVGTPILYRGVAVGSVTAVNLKFDY---------VELNVLIDEQYGALIRSQN 454
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 42/156 (26%), Gaps = 4/156 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ + V++ G+P+G I + D E A I P S A TQ
Sbjct: 649 GVKVGTPVQYQGVPIGEIFEVIPDFESD-FVKLSARIEPQY---ASKIAKQNTQFWLSQA 704
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
I LS + + + + + + +R +
Sbjct: 705 KIGLSGIENVQNLLGHSIEVQPGTGESRFEFELHKEARHGGAGKTYTLQSETRGSVSVGT 764
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ I+ A+ + ++
Sbjct: 765 PVLYRDIEVGKVIDVRLGEFADRVITTIRIAPQYTY 800
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMVLAGWLVFKA-----VHDAGVRIQIHF-ENAQGLIAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SEGLDSIYVEADIYPEATKLLSTQTRFWM 111
>gi|300797856|ref|NP_001179297.1| desmoplakin [Bos taurus]
gi|297489535|ref|XP_002697644.1| PREDICTED: desmoplakin [Bos taurus]
gi|296473943|gb|DAA16058.1| desmoplakin [Bos taurus]
Length = 2889
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 34/377 (9%), Positives = 114/377 (30%), Gaps = 14/377 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + ++ + IN
Sbjct: 1322 SLEEAAKTIQDKNKEIERLKTEFQEEAKRRWEYENELAKVRANYDEEIISLKNQFETEIN 1381
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+ + + + ++ + LA N + ++ Q
Sbjct: 1382 ITKTTIHQLTLQKEEDTSGYRAQIDTLTRENRSLSEEVKRLKNTLAQNTETLRRVEENVQ 1441
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K D++ +
Sbjct: 1442 QQKATGLEMSQRKQQLEVELRQVTQMRTEESARYKQSLDDAAKTIQDKNKEIDRLKQLIE 1501
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + S + + + + ++ +R
Sbjct: 1502 TEASQRKCLEDENARLQRAQGELQKAHSSA--TETISKLKVQEQELLRLRLDYERVSQER 1559
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK 385
I + L QK E ++++ A E++S K + + R T ++
Sbjct: 1560 TVRDQDIARFQTSLKELQLQKQKAEEELARLKR--AASEDSSKRKKLEEELEGMRRTLKE 1617
Query: 386 INRYIPSIGNNLQNFS----------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ S+ L+ S + + + +R+ Q T + + E +
Sbjct: 1618 QAIKVTSLTQQLEQASIVKKRSEDELRQQRDTLDGHLREKQRTQDELRRLASEVEALRRQ 1677
Query: 436 IVWGREKGSVKIYKPKH 452
++ +E + +H
Sbjct: 1678 LLQEQESVRQAQTRNEH 1694
>gi|15828393|ref|NP_302656.1| putative cell invasion protein [Mycobacterium leprae TN]
gi|221230870|ref|YP_002504286.1| putative cell invasion protein [Mycobacterium leprae Br4923]
gi|13093823|emb|CAC32121.1| putative cell invasion protein [Mycobacterium leprae]
gi|219933977|emb|CAR72689.1| putative cell invasion protein [Mycobacterium leprae Br4923]
Length = 441
Score = 46.5 bits (107), Expect = 0.009, Method: Composition-based stats.
Identities = 16/119 (13%), Positives = 40/119 (33%), Gaps = 10/119 (8%)
Query: 21 SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQEY 77
F +Y + P +++ + GL S + +NG+ +GR+ + +
Sbjct: 29 IFGLVY--GQFRGNFTPKSKLTMLADR--AGLVMDRGSKITYNGVKIGRVADISETVRNG 84
Query: 78 PNHSLAKALIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQ 133
+ + P + + A I+ + G Y+ + +K + +
Sbjct: 85 RPVAEFTLDVYPRYLSLIPANVNADIKATTVFGGKYVSLTTPEHPSQKRLTPQTVIDAR 143
>gi|120401392|ref|YP_951221.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119954210|gb|ABM11215.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 378
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 33/258 (12%), Positives = 69/258 (26%), Gaps = 4/258 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
V + +S VR + VG + + H+L + D L + T + L
Sbjct: 53 DVSNIEPNSRVRVGDVSVGTVTRIE---RQDWHALLTVTLDGDVDLPANATVKLGQTSLL 109
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPS-GINYFISNAENTSKKISDSSRHIQ 166
G ++EL+ E A + + PS ++ + +
Sbjct: 110 GSLHLELAPPTDEPPQGQLAAGSLIPLSHSGSYPSTEETLAAVSSVLNGGGLGHVQDITE 169
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
+ I + T A+ ++ T + + D
Sbjct: 170 AFSTAFRGREQDLRSLIGELDTFTADLDDQTPDIIAATDSLNQLASKFAARKPVLDRALE 229
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
A Q+ ++ + + D V T ++ Q V + +
Sbjct: 230 TIPDALAELNQQKEDLINAADQFAKFSALTVDTVNQTKDNLVAQLQQIGPVLESLADAGP 289
Query: 287 DFSSKMKSKETSAFLENI 304
+ + T F
Sbjct: 290 SLTRSLSLIPTFPFPNET 307
>gi|324999492|ref|ZP_08120604.1| Mammalian cell entry related domain protein [Pseudonocardia sp. P1]
Length = 430
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 31/371 (8%), Positives = 100/371 (26%), Gaps = 20/371 (5%)
Query: 1 MESKNYYTSVGLF-------VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS 53
M + + T + F V + S + + +V L
Sbjct: 1 MAKRVHRTDIRNFLVGVVALAVLVTVAVIGGRANTGGSIPF--QTYTFVRAAFDNVGNLD 58
Query: 54 T-DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
VR+ +P+G +V D ++ ++ + ++ TA + ++ G +I
Sbjct: 59 PTKQDVRYRSVPIGEVVDSRYD---NGTAVVTLRLKGEWDVHSDATARVLSESALGRKFI 115
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS-----SRHIQK 167
+L + + A +N F + + H
Sbjct: 116 DLDLGSPSAGPLGDQVIAADATEDSLALDDVLNVFDQPTRDGLRSSMVELGGGAFGHGPD 175
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + ++ + A + + + + + +
Sbjct: 176 LQDAVQAAPALLGDLRAVGGALTAPDADLPGLLDGANTLAGRFAGRQQELENLVRQADVT 235
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + + + ++ + + + ++ + + + D R + E + D
Sbjct: 236 MQAVSVDGGRPLGDTMKVLPGTLRDAKQALEDLETPLADTRAAVEALPEGADALGRATPD 295
Query: 288 FSSKMKSK--ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + + + + ++ +T+ + S L+
Sbjct: 296 LRGVLTEAPRPLGKVPDVADRAGPAVEDLTGTLADARPLVPQLQTTLGDANVLVSGLSPF 355
Query: 346 SQKFAELMSKI 356
S ++
Sbjct: 356 SNDIGRFFEQL 366
>gi|317508869|ref|ZP_07966508.1| hypothetical protein HMPREF9336_02880 [Segniliparus rugosus ATCC
BAA-974]
gi|316252830|gb|EFV12261.1| hypothetical protein HMPREF9336_02880 [Segniliparus rugosus ATCC
BAA-974]
Length = 389
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVD-GLSTDSSVRFNGIPVGRIVGLFL 73
V + L R++Q + + S+ G+ S V++ G +G + L
Sbjct: 22 VVTILALCVGAVLLHRTSQRQYDTPFTLTLLTESIGEGVLPGSEVKYCGYTIGSVQDLVP 81
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ L T+A G +
Sbjct: 82 LGSGGQKMVLVLDGPQAAVLSSDTSAKFIPSNSLGTS 118
>gi|187939970|gb|ACD39105.1| paraquat-inducible protein B [Pseudomonas aeruginosa]
Length = 593
Score = 46.5 bits (107), Expect = 0.010, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 47 GSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
V G+ + V FNG+ VG + + +D++ + + A + P
Sbjct: 113 NDVSGIDPGRTPVMFNGVQVGLVKSIDMDKD-YSSATADLAMDPRVE 158
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ DGL + +RF G+ +G+I + L+ +
Sbjct: 350 DNADGLREGTPIRFKGLDIGKIESVELNPD 379
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 6/92 (6%), Positives = 24/92 (26%), Gaps = 1/92 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 224 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 283
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + + +T+ +
Sbjct: 284 SSGITLTGNLSGVQVKSESLQTLITGGISFDT 315
>gi|297677094|ref|XP_002816443.1| PREDICTED: LOW QUALITY PROTEIN: desmoplakin-like [Pongo abelii]
Length = 2871
Score = 46.1 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 30/375 (8%), Positives = 114/375 (30%), Gaps = 10/375 (2%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1312 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1371
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 1372 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDVQ 1431
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 1432 QQKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLID 1491
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + + + ++ +R
Sbjct: 1492 KETNDRKCLEDENARLQRVQYDLQKANSSA--TETINKLKVQEQELTRLRIDYERVSQER 1549
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I ++ L QK E ++++ ++ L ++ + + ++ +
Sbjct: 1550 TVKDQDITRFQSSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 1609
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T + E + ++
Sbjct: 1610 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLL 1669
Query: 438 WGREKGSVKIYKPKH 452
+E + +H
Sbjct: 1670 QEQESVKQAQLRNEH 1684
>gi|118468700|ref|YP_884763.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
gi|118169987|gb|ABK70883.1| virulence factor Mce family protein [Mycobacterium smegmatis str.
MC2 155]
Length = 379
Score = 46.1 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 32/248 (12%), Positives = 74/248 (29%), Gaps = 16/248 (6%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ L +S VR + VG + + H+L + D L + TATI L
Sbjct: 54 DITNLQPNSRVRVADVTVGTVTKVE---RQGWHALLTLRLNGDVNLPANCTATIGQTSLL 110
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
G ++EL+ + + + P + E T +S
Sbjct: 111 GSLHVELAPPAAAPP--------QGRLHQGSLIPLADSTTHPTTEQTLAAVSMLLN---- 158
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
+ + T A + A+ + I ++ T + + +T
Sbjct: 159 -GGGLGQMQDITKALSTALRGREADLRNLIGQLETFVAKTNDQTGDIIEATEKLNRLTGK 217
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + + V I + ++V + + + + ++ + +
Sbjct: 218 FAAQQPVVDKAVRTIPDALEVLKDQRDNLTAALDQLGRFSALAADSTRQTKDSLVREFRN 277
Query: 288 FSSKMKSK 295
++S
Sbjct: 278 IGPVLESL 285
>gi|328956168|ref|YP_004373501.1| YhgE/Pip N-terminal domain protein [Coriobacterium glomerans PW2]
gi|328456492|gb|AEB07686.1| YhgE/Pip N-terminal domain protein [Coriobacterium glomerans PW2]
Length = 730
Score = 46.1 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 43/433 (9%), Positives = 120/433 (27%), Gaps = 13/433 (3%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSVRFN 61
+ + + L VV L W + + +D G + + + + G +
Sbjct: 14 RIRRSVIALIVVVGLIIVPVLYAWFNIAGSWDPYGNTGNLKVAVANTDRG-YRSDLIPIK 72
Query: 62 GIPVG-RIVG-LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ +G + L +++ + + A + + + ST K
Sbjct: 73 -VNIGNSVTSALRENKDLDWVFVDRDQAVEGVRSGEYYAAVVIPEDFSSDMMTLFSTQVK 131
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
I+ + N A + T + S
Sbjct: 132 HSNIIYYENQKANAIAPRVTDKGA-TTVRKQIDETFTETIGSIGLSTSANLLDFMNSDQI 190
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
A + +++ L +IS + T+ S + T + A + +
Sbjct: 191 GAYVSNLNSTLDASISGLRDAHAGTKSLSGLLGSTSGLVGSTGRLMGDTGGTSAQMRKLL 250
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + + + ++D + + + D + K + +S+ S
Sbjct: 251 ADAKQGLGDTQASIEGAADTINHALGDTAASYDAVSSAVGKAFSAAGTQAGDTQSQLKSI 310
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
+ + + D ++ + S L+ ++K +L +++N
Sbjct: 311 ASRVGEQAARTEKIKGDIEKIERDLPDLDPRVKAPLDGVISRLDAVAKKQRDLEARLNA- 369
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL---- 415
A + ++ + + I + + + + ++ V
Sbjct: 370 -AASDIGGSASAIEQNRKDIQALVAEAKAGITQVKADYETTLKQNAAQLEKTVEDTVSGS 428
Query: 416 QETVNHFDDCLNN 428
++T D +
Sbjct: 429 RDTARDLDATVKK 441
>gi|41406662|ref|NP_959498.1| Mce4 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|41395011|gb|AAS02881.1| Mce4 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 379
Score = 46.1 bits (106), Expect = 0.010, Method: Composition-based stats.
Identities = 15/105 (14%), Positives = 33/105 (31%), Gaps = 9/105 (8%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEY 77
F++ P+ V + P GL + V++ GI +G++ + +
Sbjct: 1 MVAFAVLTYLSYTAAFAPIDTVTVSAPR--AGLVMEQGAKVKYRGIQIGKVEAIEYSGD- 57
Query: 78 PNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+ I + + T I + G +E +
Sbjct: 58 --QARLTLGINSKDMHFIPSNATVHIAGNTIFGAKAVEFIPPQTP 100
>gi|262275787|ref|ZP_06053596.1| paraquat-inducible protein B [Grimontia hollisae CIP 101886]
gi|262219595|gb|EEY70911.1| paraquat-inducible protein B [Grimontia hollisae CIP 101886]
Length = 874
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 27 WLSRSNQYDGPMAEVIIRIP-GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
W + D + + GL+T S +++ G+ VG + GL +
Sbjct: 621 WKLYDSFTDAQNYGLKLTFDAEDASGLTTGSKIKYQGVNVGEVTGLSPAFQTDGV 675
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
P + V+ S GL ++V + G+ VG + + L E + +I PD
Sbjct: 392 PRSLVVTVSSESSWGLKEGTNVLYRGVQVGFVKNITLSDED---VKMQLVIHPDHK 444
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
+F + + + +Y + + I G+ +++R+ G+ VG I
Sbjct: 25 IFTLLAFVLAGWLLYK-----SVNEAGERIEI-FFTDAQGIEAGRTTIRYQGLEVGIIRK 78
Query: 71 LFLDQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ L + + A+ L +T +
Sbjct: 79 VTLSDDLKSISAEAEIYPEAKKILRENTVFWV 110
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 8/56 (14%), Positives = 15/56 (26%), Gaps = 3/56 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ I + +S S V + VG++ LD +
Sbjct: 514 KGYQRFTLIADKLPSVSEGSPVMYKNFTVGKVESFELD---KTRVKVTVQVENRYR 566
>gi|300783701|ref|YP_003763992.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299793215|gb|ADJ43590.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 424
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 23/115 (20%), Positives = 42/115 (36%), Gaps = 7/115 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI-IRIPGSVDG--LSTDSSV 58
E++ G+ +LF + YD + + + S G LS V
Sbjct: 4 ETRR---KAGVRTAGVLFLVVMGVLVTLSIKVYDKDFVTTVPVTLKASRIGNQLSPGGQV 60
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
+ G+ VG I G+ + +LA L + +A + + L G Y++
Sbjct: 61 KARGVLVGEIRGVRATPQGAEIALA-LEPGKVDMLPRNVSALLVPKTLFGERYVQ 114
>gi|284043089|ref|YP_003393429.1| hypothetical protein Cwoe_1626 [Conexibacter woesei DSM 14684]
gi|283947310|gb|ADB50054.1| Mammalian cell entry related domain protein [Conexibacter woesei
DSM 14684]
Length = 442
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 26/298 (8%), Positives = 75/298 (25%), Gaps = 19/298 (6%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVI----------IRIPGSVD-GLSTDSSV 58
+ + + ++ Y L+ Y ++ SV G +V
Sbjct: 13 IAILALVVVAAIVGG-YILAHQRIYFPSWVPIVGKEEFILKGEFSTAQSVTPG--QGQTV 69
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
G+ VG I + L ++ + P +YP T +R + +EL
Sbjct: 70 DIAGVQVGEISNVEL---KNGRAIVTMRVDPRYAQIYPDATMLLRPKTGLKDMVVELDPG 126
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + + ++T + + + L
Sbjct: 127 NRSSGR-RLDSGDTLPVSNTAPDVNLDEILAVLDKDTRTYLQLLLNGAAVGLTGNGQELA 185
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ ++ + + + + D +
Sbjct: 186 QVFRRFDPLARDAKRATELLVERRGHIRRAITNFGKFTQALARNDAQLRTFVDSSQAVFR 245
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ N++ + F + Q + + R+ + + +++
Sbjct: 246 RFANQGSNLEQALAEFPSTLQQTQSALAATRQFADQAGPALESLRPFARALGPALRAT 303
>gi|118462367|ref|YP_883678.1| virulence factor Mce [Mycobacterium avium 104]
gi|118163654|gb|ABK64551.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 392
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 22/105 (20%), Positives = 39/105 (37%), Gaps = 11/105 (10%)
Query: 14 VVSILFFSFFSIYW-------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+V L S W L G + +++P ++ L+T+S VR + VG
Sbjct: 25 LVVALAAMLTSCTWRGIADVPLPVGRGTGGDHMTIYVQMPDTLA-LNTNSRVRVADVWVG 83
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + L + + + P L + TA I L G +
Sbjct: 84 TVRAITL---KDWVATLRLDLDPGVRLPANATAKIGQTSLLGTQH 125
>gi|126433448|ref|YP_001069139.1| hypothetical protein Mjls_0839 [Mycobacterium sp. JLS]
gi|126233248|gb|ABN96648.1| Mammalian cell entry related domain protein [Mycobacterium sp. JLS]
Length = 333
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 32/314 (10%), Positives = 91/314 (28%), Gaps = 12/314 (3%)
Query: 3 SKNYYTSVGLF--VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
++ + VG V+++ + ++ L +++I + L + V
Sbjct: 2 NRRIWRLVGAVGTVITVSSCASLNVSSLPAPGSTYSGGYDIVIEF-ANALNLPDSAKVVL 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G VG + + L + I + A ++ + G Y+ L +
Sbjct: 61 DGTTVGVVSHVALSSN---AVDVTSTIERGVAVPSDIRAVLQQDTVLGDIYVALERPETD 117
Query: 121 KKTIF------QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ +I + ++ + + +R + E+
Sbjct: 118 QAPAPALSPGARIPLAQTTSPPQLEDTIAHLANFVSSGSIQRVQESIARINRIQPPGGEE 177
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + + L+NN++ +D ++ T + K + + +
Sbjct: 178 GIRKMASQVAADLGDLSNNMNLVDLWLNGVSETIDVAHRKIPVLQEMFSEEGMTAFRRFL 237
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
++ + S ++N++ D TQ + + + +
Sbjct: 238 EIFSYVGTILPSTGSIYAGGFWLVPLLNSLRDAAGATQQSKRMFEAEAPAWRRLLTDFFL 297
Query: 295 KETSAFLENIADST 308
+ NI
Sbjct: 298 PQDKYPAINITSIM 311
>gi|269793322|ref|YP_003318226.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100957|gb|ACZ19944.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 707
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 36/410 (8%), Positives = 97/410 (23%), Gaps = 27/410 (6%)
Query: 53 STDSSVRFNGIPVGRIV-GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + V+ NG PVG + + LDQ I D + S A + + +++
Sbjct: 186 TVAAPVKVNGRPVGSVTVDVTLDQIQK--------IVGDARIMGSGYARLVSYKGTVVSH 237
Query: 112 IELSTLRKEKKTIFQIATER--NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ S L K I + + + R
Sbjct: 238 KDPSRLMKPMGEINTPDGKEVLDHIQQGKIWTGVAWSEAEKRNIIKVNVPVRVRGTDTPW 297
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ + T ++ + ++ + + +++
Sbjct: 298 SLGTTTRQEEVFSTARRLTWTMGTLAILGALLLGVVTYLAVGKAVSPLKGLSEAAGRAAS 357
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ D + + + V + + + + + S +
Sbjct: 358 GDLSFDESSLLVSTGDEIQLVSEGVATMIRNLKETLGALGAASEELSLASEALTKASSEA 417
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
S + + + ++ N+ + +
Sbjct: 418 SSEMESSAQRVALVQERLGRLSAAQQEITASSQEVASGSQMSAQRATDMAENVELARRAA 477
Query: 350 AELMSKIN----NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
E S ++ I+++ E R + + I I + + +
Sbjct: 478 EEGSSAVDRVAKAITSVAEEAERSSQMVRGLGEMARQIQSFVAQIGQIADQTNLLALNAA 537
Query: 406 NDIQNL----------VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSV 445
+ ++++ + I G E G V
Sbjct: 538 IEAARAGEAGKGFAVVAEEVRKLAEESNRAAGQIAELADRI--GGEMGKV 585
>gi|296171126|ref|ZP_06852578.1| MCE family lipoprotein LprM [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295894316|gb|EFG74070.1| MCE family lipoprotein LprM [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 374
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 20/108 (18%), Positives = 38/108 (35%), Gaps = 6/108 (5%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
L + + ++P V L +S V+ + VG + + H+L
Sbjct: 28 VALPGTAGRGPGSFTIHAQLPD-VGTLDQNSRVQVGDVTVGNVTRIE---RQGWHALLTI 83
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATER 131
+ D L + TATI L G ++E T + + + +
Sbjct: 84 RLNGDVDLPANATATIGQSSLLGSLHVELAPPTGAPPRGRLREGSLIA 131
>gi|213161348|ref|ZP_03347058.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
Length = 756
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 636 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 694
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 695 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 749
>gi|145222148|ref|YP_001132826.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145214634|gb|ABP44038.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 400
Score = 46.1 bits (106), Expect = 0.011, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 25/80 (31%), Gaps = 9/80 (11%)
Query: 35 DGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD-- 90
P +V + P GL D+ V++ GI VG++ + + I
Sbjct: 37 FTPTDKVTVLSPR--AGLVMDVDAKVKYRGIQVGKVESIEYAGN---AAKLTLAINRGDM 91
Query: 91 TPLYPSTTATIRTQGLAGIT 110
+ I + G
Sbjct: 92 RYIPGDAPVRIGGTTIFGAK 111
>gi|169628789|ref|YP_001702438.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169240756|emb|CAM61784.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 376
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 16/107 (14%), Positives = 30/107 (28%), Gaps = 10/107 (9%)
Query: 11 GLFVVSILFFS------FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
GL V + + + + L + V+ G
Sbjct: 4 GLPVFLAVVLLSAGCSTGGLADLPLPAPGLGAGGYRLTAVF-ANALNLPERAKVKLAGAD 62
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+G + + ++ IR D L +TA +RT G +
Sbjct: 63 IGEVESMAAV---DFRAVTTLRIRHDVTLTAGSTAQLRTATPLGDVF 106
>gi|296209973|ref|XP_002751793.1| PREDICTED: laminin subunit beta-1 [Callithrix jacchus]
Length = 1788
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 70/218 (32%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D D
Sbjct: 1444 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEDLR 1503
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1504 NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1563
Query: 340 SNLNDSSQKFAELMSKINNISALK-ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + A+ + I ++Q
Sbjct: 1564 QQSAADIARAEMLLEEAKRASKSATDVKVTADTVKEALEEAEKAQVAAEKAIKQADEDIQ 1623
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +D+
Sbjct: 1624 G-TQNLLTSIESETAASEETLFNASQRISELERNVEDL 1660
>gi|26987336|ref|NP_742761.1| hypothetical protein PP_0599 [Pseudomonas putida KT2440]
gi|24981987|gb|AAN66225.1|AE016251_1 PqiB family protein [Pseudomonas putida KT2440]
Length = 766
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 1/114 (0%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAK 84
+ L S + +I DGL +++RF G+ VG I + L + A+
Sbjct: 505 FRLHDSQEAVNRAGTLITIRVDRADGLKPGTAIRFRGLDVGSIESVDLTDDLQAVLLRAR 564
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
D T + L + L TL + Q A +
Sbjct: 565 ITESADRIARAGTQFWVVKPALGLVRTENLDTLIGGQYLEVQPAAKNRGPQRDF 618
Score = 44.9 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 7/96 (7%), Positives = 24/96 (25%), Gaps = 1/96 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + + + + + S+
Sbjct: 400 VLFADTLGSLEIGSPVTYRQVKVGSVQSYQFARNSNRILIGVHIEKEYEKLVNGSSRFWN 459
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ + + +T+ +
Sbjct: 460 VSGITLTGGLSGIKIKSESLQTLMAGGIAFDTPRPD 495
Score = 44.5 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 12/106 (11%)
Query: 2 ESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSV 58
+++ + ++++ + + L + + Y E+ +R S +G+ + + V
Sbjct: 8 KTRPASNWSAIWILPLIALMIGGWLAWQA-----YRDAGVEIEVRF-ESGEGIVANKTEV 61
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDT--PLYPSTTATI 101
+ G+PVG++ L LD + +A + L T +
Sbjct: 62 IYKGMPVGKVKSLVLDAKGDTQGVIATIEMNKAAEPHLTKGTRFWL 107
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 31/134 (23%), Gaps = 1/134 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ DS V + I VGR+ L ++ + + T + +
Sbjct: 170 LNRDSPVFYKQIQVGRVKSYRLSEDQSTVEVKVFIEPAYASLVRKHTRFWNASGVSIDAS 229
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +I +P R K+ +
Sbjct: 230 LSGVKVRSESLSSIVAGGIAFATPEYRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKLSD 289
Query: 171 NIEKPLTTTIANIE 184
T +
Sbjct: 290 YEGLQAGRTPVMYK 303
>gi|254506531|ref|ZP_05118672.1| methyl-accepting chemotaxis protein [Vibrio parahaemolyticus 16]
gi|219550404|gb|EED27388.1| methyl-accepting chemotaxis protein [Vibrio parahaemolyticus 16]
Length = 779
Score = 46.1 bits (106), Expect = 0.012, Method: Composition-based stats.
Identities = 41/393 (10%), Positives = 116/393 (29%), Gaps = 18/393 (4%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
LS + V G+ G + + ++ +LI S+ I + +
Sbjct: 390 LSAYAPVNAAGLSWGIVTEID---KHEALKDVDSLINAMIFTVLSSIVVIVFIAIVISYF 446
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ S K +I + ++ + + + I
Sbjct: 447 LGRSIAWPIKLASERIQQISENNDLTQRLEVAGKDEMTELALSLNGLFTHLQQIIGKFAQ 506
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
L + ++ + + + + + +
Sbjct: 507 ATDDLNSNTNSMAGNMNSTRAAVDDQNHRTESVATAVNEMSASIAEVAQFATRAAEFVKN 566
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD---- 287
+ I ++ V + + + + + T + EV I +
Sbjct: 567 ANDAGSQGVNIGRSLGVEISQLNQQMQTAVEAIGRLHNETNSIAEVLDVIQGIAEQTNLL 626
Query: 288 -FSSKMKSKETSAFLENIADSTSNMRS-SISAIREITDQRQKIISTINTIENITSNLNDS 345
++ +++ A +RS + + R+KI S ++ ++ ++
Sbjct: 627 ALNAAIEAARAGEQGRGFAVVADEVRSLAGRTQSSTEEIREKIESLQRETNEVSKSIENA 686
Query: 346 SQKFAELMSKINN--------ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ ++ ++ + ++ L E N + A R +++I+ I SI +
Sbjct: 687 NITVSKGVATCDENTDMLEQIVTMLIELNEMNVQIAAATEEQRAVTDEISGSITSIADAS 746
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
S +ND+ ++++ L + + F+
Sbjct: 747 SAVSIQ-VNDVDDVLQGLSSQAEELNQDVTQFK 778
>gi|120404932|ref|YP_954761.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119957750|gb|ABM14755.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 380
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 11/134 (8%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQ------YDGPMAEVIIRIPGSVDGLSTDSSVR 59
+ ++++ W ++ GP + VI V+ + +S VR
Sbjct: 7 RRIMLSAATIAVVMGMSGCADWQGLNSLPMPGTEGGGPGSFVIQAQLPDVNNIQPNSRVR 66
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE--LSTL 117
+ VG + + H+L + D L ++T TI + G +IE
Sbjct: 67 VGDVNVGTVTKVE---RQGWHALLTMRLNADVNLPENSTVTIGLTSILGSLHIELSPPAG 123
Query: 118 RKEKKTIFQIATER 131
+ +
Sbjct: 124 AAPVGRLHDGSLIP 137
>gi|152978753|ref|YP_001344382.1| hypothetical protein Asuc_1081 [Actinobacillus succinogenes 130Z]
gi|150840476|gb|ABR74447.1| Mammalian cell entry related domain protein [Actinobacillus
succinogenes 130Z]
Length = 884
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 15/112 (13%), Positives = 36/112 (32%), Gaps = 1/112 (0%)
Query: 42 IIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTAT 100
II LS + + + G+ VG+I + L++ A + + +T
Sbjct: 756 IILEANDASNLSIGAPLMYRGVDVGKIKDMELNRLGDRVLIHALIANKHAHLVRQNTQFW 815
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
I + AG+ + + + + + + + P +
Sbjct: 816 ISSGYTAGLGWNGIEVNTGSVQQLLKGGIAFSTPSGTIVQPQAKANQRFLLQ 867
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 8/92 (8%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQ 75
++ + + + I + DGL D + VR+ G+ +G + +
Sbjct: 36 VIALLIGATLFFQIIR---EQGHTIRITF-ATGDGLVADKTQVRYQGLQIGIVKKVSFT- 90
Query: 76 EYPNHSLAKALIRPDTP--LYPSTTATIRTQG 105
+ +A I P+ L +T +
Sbjct: 91 DDLKKVEVEANIYPEAKTVLRKTTRFWLVQPN 122
>gi|315637572|ref|ZP_07892779.1| paraquat-inducible protein B [Arcobacter butzleri JV22]
gi|315478163|gb|EFU68889.1| paraquat-inducible protein B [Arcobacter butzleri JV22]
Length = 884
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 37/395 (9%), Positives = 104/395 (26%), Gaps = 27/395 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
++K + + ++ + W++ Y + + S +GL + + + +
Sbjct: 18 KNKLSFIWILPLIILGVLG------WIA-YESYAKKGTNITVVFK-SAEGLKENITPLEY 69
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ + + ++ L+ D R G +
Sbjct: 70 KGLQLGKVTKISMHED-LQSVKVNILVNNDVA---------RYVANEGSKFWIKKPTISL 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENT----SKKISDSSRHIQKIIENIEKPL 176
K + ++ + + A + + N+
Sbjct: 120 TKISGLNTLISGYKIELSPRFKTQDDYNKGAYQDYFEGLDTQPNDEWELNGYYINLIASN 179
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ T I I + S+ + FN + + +
Sbjct: 180 DKDNIEVGTPIFYNKFQIGEIVAKEFRYEKVFLSAYIYDKFNYLVNKSSKFVMNEALKVN 239
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + + V + + D + EV D L + + +
Sbjct: 240 YGASGLNIELGSLYSALVGGITVITSNKDDAKIENSDIYEVYASKDDLKNKEYFTINFTD 299
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN--ITSNLNDSSQKFAELMS 354
S N + + + + +T ++ +
Sbjct: 300 VSGIEANTPIMFKGIEIGKVLEVNLNKDVLTTKAFVYGEYKYILTDKTRFFVEEPTISLD 359
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
+ N+ + + N + D + F +T IN+
Sbjct: 360 GVKNLGNIIKGNFISLDYKN--GEFSNTFNAINKK 392
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
++ + I V+GL + S + + G+ VG++ + L+ + A
Sbjct: 633 GNEDEMKNSTNSLTIVF-DDVEGLQENFSQLTYKGVNVGKVKKISLNSKQQIEVKALIYD 691
Query: 88 RPDTPLYPSTTATIR 102
+ T ++
Sbjct: 692 DFASFAKEGTVFYLK 706
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 21/52 (40%), Gaps = 1/52 (1%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
V + ++ D+ V + + +G++ + L ++ + + LI
Sbjct: 757 TVYKVEDATASSVNVDAPVYYKNVQIGKVSKIDLSEDG-SKVIVDCLIFDKY 807
>gi|213419893|ref|ZP_03352959.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 236
Score = 46.1 bits (106), Expect = 0.013, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 116 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 174
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 175 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 229
>gi|296141841|ref|YP_003649084.1| hypothetical protein Tpau_4176 [Tsukamurella paurometabola DSM
20162]
gi|296029975|gb|ADG80745.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 345
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 37/285 (12%), Positives = 82/285 (28%), Gaps = 18/285 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSN-------QYDGPMAEVIIRIPGSVDGLS 53
M ++ + ++ L + I+ P V L
Sbjct: 1 MTTRIRTIWP---ALLAAVLVITGLWSLRDIGPATLPTPGSAASGWRLKIQFPD-VLNLP 56
Query: 54 TDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE 113
+ VR G VG + G+ L ++ A I+ DT + + A +R G Y+
Sbjct: 57 DQAKVRLLGRDVGSLEGVRL---TDKNAEATLRIQSDTRVPRAAVAELRQDTPLGDIYVA 113
Query: 114 LSTLRKEKKTIFQIATE----RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
L+ + T F + RA + + + ++ ++ +
Sbjct: 114 LTPPNTTQSTAFFADGDLVPQSQTRAPVQMEQMLTSLADFLGSGSLSQLGNTFDRLNSSF 173
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
I N+ T +N+ +D + + ++ + +
Sbjct: 174 PEDPALTKKIIGNLTTTVDAWSNDTKSLDTAVVSLVELTTKLAAQRDLVGAYLAPEAAPR 233
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
I+ + + + + NN + T VR +
Sbjct: 234 WKTVIETGDIVAVFAALAPTFNNAAFLVPTLRETNTLVRAVLRPL 278
>gi|289811433|ref|ZP_06542062.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 227
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 107 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 165
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 166 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 220
>gi|213582285|ref|ZP_03364111.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 388
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 26/115 (22%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 268 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 326
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 327 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 381
>gi|326431203|gb|EGD76773.1| hypothetical protein PTSG_08124 [Salpingoeca sp. ATCC 50818]
Length = 783
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 27/383 (7%), Positives = 100/383 (26%), Gaps = 15/383 (3%)
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+R ++ + + + EK I ++ +
Sbjct: 63 FEMRLGGHIHTDQIEQGNAAEIIKMIALLTLASLDEKAPIKYYDALQDMSDEHVQHLESL 122
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
++ + + ++ ++ +
Sbjct: 123 RELAASLLTPEMGAESPDQQSPASPSAHSHASHSDPLSMSMSMSMPGRPQTPQTPTSRVG 182
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ P S T + L T + + ++ + +++
Sbjct: 183 SMRPPSRCMVRTPHQHRLLRTPHQHRLLHTPISSRKAAKRALERVNTENDDLREELHELQ 242
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
+++E + + K + + ++ L ++ M+ + E DQ
Sbjct: 243 EELKERSAQVAALTIKAERADRFEAELEDARTELDELRDVRGRFDRMKRQLEHANEELDQ 302
Query: 325 RQKIISTINTIENITSNLNDSSQKFAE------------LMSKINNISALKENNSLFKDA 372
+ + ++ + + A+ + + + + E
Sbjct: 303 LRVVERQLSDALEARDRMQEEKAVLAKKLECQESSSRRRISELQKDRTRVSELEGELSAW 362
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK---LQETVNHFDDCLNNF 429
+ A + + + + + + + +D L L+ ++N +++
Sbjct: 363 RNAAENAEAQVKSLKAELAVVQKQVSQEAMTKQSDAAELEADNARLRTSLNELRAEVSSM 422
Query: 430 ERNPQDIVWGREKGSVKIYKPKH 452
+ ++ ++ VK Y+ K
Sbjct: 423 SQERDRLLQMSQEFEVKEYEMKQ 445
>gi|169628101|ref|YP_001701750.1| putative MCE family protein [Mycobacterium abscessus ATCC 19977]
gi|169240068|emb|CAM61096.1| Putative MCE family protein [Mycobacterium abscessus]
Length = 436
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ ++ L ++ V+ G VG++ + + ++ I
Sbjct: 35 GVGTGGYHLTALFS-NILNLPNNAKVKLAGADVGQVDDMRV---SNYTAITTLRILDGVR 90
Query: 93 LYPSTTATIRTQGLAGITY 111
L +TA +R+ G +
Sbjct: 91 LPKGSTAELRSATPLGDVF 109
>gi|157737786|ref|YP_001490470.1| paraquat-inducible protein B [Arcobacter butzleri RM4018]
gi|157699640|gb|ABV67800.1| paraquat-inducible protein B [Arcobacter butzleri RM4018]
Length = 884
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 37/395 (9%), Positives = 104/395 (26%), Gaps = 27/395 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
++K + + ++ + W++ Y + + S +GL + + + +
Sbjct: 18 KNKLSFIWILPLIILGVLG------WIA-YESYAKKGTNITVVFK-SAEGLKENITPLEY 69
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ +G++ + + ++ L+ D R G +
Sbjct: 70 KGLQLGKVTKISMHED-LQSVKVNILVNNDVA---------RYVANEGSKFWIKKPTISL 119
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENT----SKKISDSSRHIQKIIENIEKPL 176
K + ++ + + A + + N+
Sbjct: 120 TKISGLNTLISGYKIELSPRFKTQDDYNKGAYQDYFEGLDTQPNDEWELNGYYINLIASN 179
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ T I I + S+ + FN + + +
Sbjct: 180 DKDNIEVGTPIFYNKFQIGEIVAKEFRYEKVFLSAYIYDKFNYLVNKSSKFVMNEALKVN 239
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + + V + + D + EV D L + + +
Sbjct: 240 YGASGLNIELGSLYSALVGGITVITSNKDDAKIENSDIYEVYASKDDLKNKEYFTINFTD 299
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN--ITSNLNDSSQKFAELMS 354
S N + + + + +T ++ +
Sbjct: 300 VSGIEANTPIMFKGIEIGKVLEVNLNKDVLTTKAFVYGEYKYILTDKTRFFVEEPTISLD 359
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
+ N+ + + N + D + F +T IN+
Sbjct: 360 GVKNLGNIIKGNFISLDYKN--GEFSNTFNAINKK 392
Score = 43.4 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
++ + I V+GL + S + + G+ VG++ + L+ + A
Sbjct: 633 GNEDEMKNSTNSLTIVF-DDVEGLQENFSQLTYKGVNVGKVKKISLNSKQQIEVKALIYD 691
Query: 88 RPDTPLYPSTTATIR 102
+ T ++
Sbjct: 692 DFASFAKEGTVFYLK 706
Score = 41.8 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 21/54 (38%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
V + ++ D+ V + + +G++ + L ++ + + T L
Sbjct: 757 TVYKVEDATASSVNVDAPVYYKNVQIGKVSKIDLSEDGSKVVVDCLIFDKYTKL 810
>gi|145504665|ref|XP_001438299.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405471|emb|CAK70902.1| unnamed protein product [Paramecium tetraurelia]
Length = 986
Score = 45.7 bits (105), Expect = 0.014, Method: Composition-based stats.
Identities = 28/315 (8%), Positives = 100/315 (31%), Gaps = 10/315 (3%)
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH-IQKIIENIEKPLTTTIA 181
+ Q A + ++ + + PS I + + + ++ + + + K L
Sbjct: 230 KLRQKADKFDEISKQFSNPSDIQKELDQLKKKAAELDKLKTQLNNQNPDQLLKSLDENKK 289
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
+++ + + + ++ + + +
Sbjct: 290 QLQSKDREIGDLKRLLSELQQNQGSYDDQIRLLQQKIDELEEKVVGLAQELSRYKMLLKA 349
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + F S ++ ++++ + Q + D
Sbjct: 350 KDDELNKLQLLFRDSETRLAQMNNELQRSKNDLQRAQGDLQRAQGDLQKAQGDL--RKAQ 407
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+++ S ++ ++ Q Q++ N ++ N + + E+ ++N +
Sbjct: 408 TDLSRSQQENQNLKQQSDDLRRQNQELAQENNNLQQDLENQTQNLGQLDEIKDQLNEL-- 465
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNH 421
E N L + ++ ++ + + L+ + D++ + ++ ++
Sbjct: 466 QDEKNQLNDKVSDLQNNLKEKQRLFDQKQKELEDALKR-----VKDLEAKLLEMDHYIDT 520
Query: 422 FDDCLNNFERNPQDI 436
+D L FE++ Q +
Sbjct: 521 LEDDLQKFEKDNQQL 535
>gi|47220594|emb|CAG05620.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1873
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 22/216 (10%), Positives = 67/216 (31%), Gaps = 12/216 (5%)
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
Q++ +E ++ S ++ + ++ Q++D + +
Sbjct: 1503 AQDTEQEITNAMEEVEKLSKMVSEAKVKADEARQSAQDVLMKTNRTKQRVDESNEELRTL 1562
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+K + + + ++ ++ ++ + N I L D + +
Sbjct: 1563 IKQIRDFLTQDAADLESVELVANEVLAMQMPTTPAQLQNLTNEIRQKVDELGDVAAILQQ 1622
Query: 352 LMSKINNISALKE-----------NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
I L E + + A+ R + I ++Q+
Sbjct: 1623 SAGDIQEAERLLEQARRANEEATGVRDSAQKVKEALQEARKAQTAASSAIQQASADIQS- 1681
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ S L+ +++ + +N+ L E++ +
Sbjct: 1682 TNSLLSSVESETADAELKLNNATQRLQQLEQDVMQL 1717
>gi|226304162|ref|YP_002764120.1| Mce family protein [Rhodococcus erythropolis PR4]
gi|226183277|dbj|BAH31381.1| putative Mce family protein [Rhodococcus erythropolis PR4]
Length = 357
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 27/281 (9%), Positives = 70/281 (24%), Gaps = 4/281 (1%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G + + L VR VGR+ + + ++ I D
Sbjct: 34 RGLPGESYPLNMEFVD-ASLLPVGGEVRIGQAVVGRVTSMSAE---TFAAVVHTEIESDI 89
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
L T A I G ++ L + + + +
Sbjct: 90 ELPVGTRARIELSTPIGDAFVNLEVPVDPTGPRLEPGSTIARSETVRGPDVAQLLGAVGT 149
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
++ + + + ++ T + + T L + + S
Sbjct: 150 LLNGSGLAQVKNIVSEADQILDGREETIRDLLARLDTFLGTLDDRKESINSALNSLNRLS 209
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ D + + +L+ + + ++ + + + E T
Sbjct: 210 ALIGDESATIDEGLRTLTPALGVIADQRQPLLDLLDETDRLSTATNSVLDQSADQISEIT 269
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + S M + + + L A +
Sbjct: 270 GRLSPILDQFSAMGPTLSETMSNLDNARVLLERASPGDYVN 310
>gi|183984955|ref|YP_001853246.1| MCE-family protein Mce4A [Mycobacterium marinum M]
gi|183178281|gb|ACC43391.1| MCE-family protein Mce4A [Mycobacterium marinum M]
Length = 400
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 9/92 (9%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNH 80
P V++ P GL + V++ GI VG + ++ +
Sbjct: 25 GIALTYLSYTSAFTPTDTVVVSSPR--AGLVMEKGAKVKYRGIQVGAVEDIYYSGD---Q 79
Query: 81 SLAKALIRPDTP--LYPSTTATIRTQGLAGIT 110
+ K IR + + T I + G
Sbjct: 80 ARLKLAIRSAEMHFIPSNATVHIAGNTIFGAK 111
>gi|126437564|ref|YP_001073255.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126237364|gb|ABO00765.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 400
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 29/263 (11%), Positives = 68/263 (25%), Gaps = 18/263 (6%)
Query: 25 IYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
++ V + P GL TD+ V++ GI +G++ + + +
Sbjct: 27 VFTYLSYTAAFTSTDTVTVFSPR--AGLVMETDAKVKYRGIQIGKVKEIEYAGD---QAK 81
Query: 83 AKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
IR D + + I + G +E + Q + +
Sbjct: 82 LTLAIRSDEMKYIPANAPVRIAGTTVFGAKAVEFIP----PEKAQQTSLRPGAEVQASDV 137
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
+N + KI + I N + + +L ++ ++
Sbjct: 138 QLEVNTLFQTLTDVLGKIDPI-----NLNATISALGEGLRGNGDDVGALLEGLNYYVARL 192
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
I I N I++ + + ++
Sbjct: 193 NPKLPTLQEDFRRAAEVTNIYGDAGPDIARILDNAPTISNTIVDQQDNLNATLLAATGLA 252
Query: 261 INTVHDVRETTQTFQEVGQKIDH 283
N + + Q++
Sbjct: 253 NNGTATLEPAADNYIAAIQRLRA 275
>gi|15602131|ref|NP_245203.1| hypothetical protein PM0266 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|12720496|gb|AAK02350.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 884
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 10/101 (9%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFN 61
+ + FV + F + I + +GL + VR+
Sbjct: 25 RRISPFWLLPFVALCIGAILFF-------QIIQEQGHTIRITF-ANGEGLVAGKTQVRYQ 76
Query: 62 GIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATI 101
G+ +G + + ++ +A T L +T +
Sbjct: 77 GLQIGVVKKVNFTKDLKQVEVVANIYPEAKTVLRKNTKFWL 117
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 9/102 (8%), Positives = 28/102 (27%), Gaps = 1/102 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
++ S + + G+ VG+I + L++ + + ++ I +
Sbjct: 766 ITVGSPILYRGVEVGKINHITLNELGDRVFVHIIIARKYQHLVRQNSEFWIAAGYDFNFS 825
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + + + A P +
Sbjct: 826 LRGAEVNTGSVQQLLKGGIAFSTPASTVIQPVAKANQHFLLQ 867
>gi|146306050|ref|YP_001186515.1| hypothetical protein Pmen_1015 [Pseudomonas mendocina ymp]
gi|145574251|gb|ABP83783.1| Mammalian cell entry related domain protein [Pseudomonas mendocina
ymp]
Length = 767
Score = 45.7 bits (105), Expect = 0.015, Method: Composition-based stats.
Identities = 20/94 (21%), Positives = 40/94 (42%), Gaps = 8/94 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
++V+ ++ WL+ Y E+ + S DG+ + V + G+PVG+++
Sbjct: 18 IWVLPLIALLIGG--WLA-WRAYSEAGIEIQVMF-ESGDGIQAGKTEVIYKGMPVGKVIA 73
Query: 71 LFLDQ-EYPNHSLAKALIRPDT--PLYPSTTATI 101
L LD+ E +A + + L T +
Sbjct: 74 LTLDRSEARRGVIATLEMNKEVEARLVTGTRFWL 107
Score = 43.8 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 1/62 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ S+ + S + F I VG + L ++ L + ST
Sbjct: 400 VLFSDSLGSMEVGSPILFRQIRVGSVQSFQLSRDDSQVVLGVHIEPEYSHLVNSSTRFWN 459
Query: 102 RT 103
+
Sbjct: 460 AS 461
Score = 43.8 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 19/92 (20%), Positives = 32/92 (34%), Gaps = 1/92 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
DGL + VR+ G+ VG++ L L + L + + T + L
Sbjct: 528 DGDGLQPGTLVRYKGLEVGKVENLSLTDDLQAVMLNVRITQAAEQIAREGTRFWVVRPEL 587
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ L TL + Q A ++ R
Sbjct: 588 SLTRAANLGTLVSGQYLEVQPAGQKGARRTEF 619
Score = 40.3 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 34/150 (22%), Gaps = 1/150 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ DS V + I VGR+ L + + + T +
Sbjct: 170 LNKDSPVFYKQIQVGRVKSFALAENQSTVEVKVFIQPEYASLVRKHTRFWNASGISVDAG 229
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +I T +P+ + R K+ +
Sbjct: 230 LSGVKVRTESLASIVAGGIAFATPEHRTDSPATDPSIPFRLYEDYEAAQAGIRISLKLHD 289
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKM 200
T + I +
Sbjct: 290 FEGLEPGRTPVMYKGIQVGHMKTFKVDKDL 319
>gi|254823314|ref|ZP_05228315.1| virulence factor Mce family protein [Mycobacterium intracellulare
ATCC 13950]
Length = 101
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 12/75 (16%), Positives = 25/75 (33%), Gaps = 5/75 (6%)
Query: 20 FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGL-FLDQE 76
+ + P E+ + S GL S V +NG+ +GR+ + ++
Sbjct: 27 LAVIFTLVYIQFRGGFTPKTELTML--ASRAGLVMDPGSKVTYNGVEIGRVGKIAETVRD 84
Query: 77 YPNHSLAKALIRPDT 91
+ + P
Sbjct: 85 GKPAAKFTLEVYPRY 99
>gi|291298384|ref|YP_003509662.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
gi|290567604|gb|ADD40569.1| virulence factor Mce family protein [Stackebrandtia nassauensis DSM
44728]
Length = 452
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 12/73 (16%), Positives = 25/73 (34%), Gaps = 3/73 (4%)
Query: 41 VIIRIPGSVDGLS--TDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTT 98
V + + + GL + V+ +G+ VG + + + + T
Sbjct: 33 VDVTVQAATAGLQMSRGADVKLHGVLVGEVRDINSTGDG-AELDVALDPDSTASIPAGVT 91
Query: 99 ATIRTQGLAGITY 111
A + + L G Y
Sbjct: 92 ARLLPKTLFGEKY 104
>gi|213021256|ref|ZP_03335703.1| hypothetical protein Salmonelentericaenterica_00015 [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
Length = 119
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 12/112 (10%), Positives = 26/112 (23%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 2 LNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYSLDF 60
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 61 GLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQESEPKEWRE 112
>gi|296197462|ref|XP_002806728.1| PREDICTED: LOW QUALITY PROTEIN: desmoplakin-like [Callithrix jacchus]
Length = 2872
Score = 45.7 bits (105), Expect = 0.016, Method: Composition-based stats.
Identities = 31/370 (8%), Positives = 113/370 (30%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1315 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1374
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+++ + + ++ + LA ++ ++ Q
Sbjct: 1375 ITKTTIHQLTMQKEEDTSGYRAQIDSLTRENRSLSEEVKRLKNTLAQTTENLRRVEEDVQ 1434
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 1435 QHKATGSEVSQRKQQLEVELRQVTQMRTEESLRYKQSLDDAAKTIQDKNKEIERLKQLID 1494
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + ++ +R
Sbjct: 1495 KETNERKCLEDENARLQRVQYDLQKANSS--VLETTNKLKVQEQELTRLRIDYERVSQER 1552
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I ++ L QK E ++++ ++ L ++ + + ++ +
Sbjct: 1553 TVKDQDITRFQSSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 1612
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T + E + ++
Sbjct: 1613 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLL 1672
Query: 438 WGREKGSVKI 447
E+ SVK
Sbjct: 1673 Q--EQESVKQ 1680
>gi|320102740|ref|YP_004178331.1| Paraquat-inducible protein A [Isosphaera pallida ATCC 43644]
gi|319750022|gb|ADV61782.1| Paraquat-inducible protein A [Isosphaera pallida ATCC 43644]
Length = 892
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPST 97
E++++ P S GL + V + + +G +V + L + A+ IRP+ + +T
Sbjct: 485 EIVLQAPASA-GLRPGTPVEYRDLRIGSVVSVNLASDG-GAVEARVYIRPNHVGLIRTNT 542
Query: 98 TAT 100
Sbjct: 543 RFW 545
Score = 44.5 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 11/94 (11%), Positives = 23/94 (24%), Gaps = 8/94 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ + + W V IR G+ + GI GR+ + L
Sbjct: 350 LGVTLLIVAWLIWAPPQGVL------VTIRFSQ-GHGIKPGDPLMHRGIEAGRVEKVALA 402
Query: 75 QE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ + + + + L
Sbjct: 403 DDLTGVRVEVRLSPEANDLARAGSQFWVVRPQLD 436
>gi|311743967|ref|ZP_07717773.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311313097|gb|EFQ83008.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 414
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 13/111 (11%), Positives = 37/111 (33%), Gaps = 6/111 (5%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
+ + +V++ + L+ + V+ G+ +GR+ + +
Sbjct: 34 FLAAVGGGMFADRQQVVVEVDDIGGALTVGNDVKIKGVIIGRVDTVERRGD---VVRLGL 90
Query: 86 LIRPDT--PLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQ 133
+R D L TA + + G ++++ + + + A
Sbjct: 91 QVRGDEADRLPAGVTARVLPATVFGTSFVDLVPPPVPTGERLAAGAVIPQD 141
>gi|198431307|ref|XP_002121687.1| PREDICTED: similar to MGC68950 protein [Ciona intestinalis]
Length = 1248
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 26/284 (9%), Positives = 87/284 (30%), Gaps = 13/284 (4%)
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
E I +S + + I ++ Q T + +
Sbjct: 219 YEKIRIQFQQLTDVKTRMSDQIQDQAKQIREIKKELQETVEDKARYVDEMSDVHETVEMA 278
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ K + +KV + I+ ++ + + ++ E+ ++ +
Sbjct: 279 TLDKEMAEEKVESMQREIEALTDKVEELQTDLEIMKAEIEESGTDGAASTYQVKQMEEQN 338
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ ++ L + + +++ + +++ + + + L +
Sbjct: 339 NKLKEALVRMRDLSTAEKA-----EYHNLEKQMEKKNKELKEITQKKDKLAAALEVAEST 393
Query: 349 FAELMSKINNISALKENNSLFKDAQ-RAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
EL +++ +E + D E+I+ + ++ +
Sbjct: 394 VDELKEQVDIAQGAEEMVETLTEKNLEQEEKIADMLEQIHDL-----ELINEMNEELQEN 448
Query: 408 IQNLVRKLQETVNHFDDCLNNFERN--PQDIVWGREKGSVKIYK 449
++L +L+E + + ER V G + +++ ++
Sbjct: 449 ARDLELELREESDMMRSKVREIERKLLASSDVVGDYQDTIQKFR 492
>gi|54027601|ref|YP_121843.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54019109|dbj|BAD60479.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 367
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 14/95 (14%), Positives = 29/95 (30%), Gaps = 4/95 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+ + L + V+ G VG + + ++ I + L
Sbjct: 45 ETYTLHAVF-ENALNLPDQAKVKIGGSDVGVVTNIT---TKNFQAVVDLSIDKNIELPRG 100
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+TA +R G +I +S + E +
Sbjct: 101 STAELRQATPLGDVFIAVSKPKAEPGAAMLQDGDT 135
>gi|45358050|ref|NP_987607.1| hypothetical protein MMP0487 [Methanococcus maripaludis S2]
gi|44920807|emb|CAF30043.1| Hypothetical protein MMP0487 [Methanococcus maripaludis S2]
Length = 729
Score = 45.7 bits (105), Expect = 0.017, Method: Composition-based stats.
Identities = 50/421 (11%), Positives = 121/421 (28%), Gaps = 23/421 (5%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S ++ + + + V +G VG + + +
Sbjct: 146 SGSEASKYSDYKVNNINDALAICVVAPVYHSGELVGTVTLVDIVNNDDYWV-------DS 198
Query: 91 TPLYPSTTATIRTQGLAGITYIELS----TLRKEKKTIFQIATERNQRAMITATPSGINY 146
ATI + + T ++ + T K ++ I T
Sbjct: 199 LKERTGNEATIFLKNVRISTTVQTNGQDATGTKCSDEVYNIITNHQDYVGTANVLGSEYI 258
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ +T T I IS + I
Sbjct: 259 TKYSPIEDKDGNVVGIIFTGIPKAPFVAVITDTRNEIIIISLLGLLLSILIALYTGRKIT 318
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
P K T + +LQ+++ + + N +K+ D +
Sbjct: 319 KPIEELKKGTEEFGNGNYDYKTTVKTGDELQELSDSFNKMAENVKNLMKTMDMDKVELAT 378
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ K D S+ + A +++ ++ + + Q Q
Sbjct: 379 LLTNVSDVMNRVAKGDFTARADESRENNNLEKAINTAVSNVADLIKELREEVELLNIQIQ 438
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI 386
K+ + E + + +++ + AE S + + L+E++ ++ +E+
Sbjct: 439 KVEDELKGAEETATQVAEAATQVAEAAS--DQSAKLQESSEELENTYEGAKEVYSAAEET 496
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ I N S++G+ ++N + ++Q N D+ + + + G + +
Sbjct: 497 VKSSEEIKEN----SETGVEKVENAISRMQSITNVIDELGKSIK------MLGEDGKKIN 546
Query: 447 I 447
Sbjct: 547 E 547
>gi|229816427|ref|ZP_04446728.1| hypothetical protein COLINT_03480 [Collinsella intestinalis DSM
13280]
gi|229807969|gb|EEP43770.1| hypothetical protein COLINT_03480 [Collinsella intestinalis DSM
13280]
Length = 736
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 50/450 (11%), Positives = 126/450 (28%), Gaps = 24/450 (5%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDS--SV 58
S+ + V L V L W + + +D G + + + S DG V
Sbjct: 13 SRIRGSVVALIVAVGLVIVPTLYAWFNIAGSWDPYGNTGNLKVAVANSDDG-YMSDLIPV 71
Query: 59 RFN-GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
R N G V + L + + ++++ A + + + S+
Sbjct: 72 RVNIGDTV--VSALRENDQLDWRFVSESDAVEGVRSGEYYAAVVIPENFSSRMMTVFSSD 129
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + ++ + N A + + + T K
Sbjct: 130 AEHAEIVYYENQKANAIAPRVTDKAA-STVRQQIDETFAKTISDVGLATTSSLLEFMDGD 188
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVT----PHSSDSKNTFNTITDLITSLDKMIKA 233
A +S LA I+ + + S+ ++ + + + K +A
Sbjct: 189 QIAAYAGNLSGTLAGAITTLRDASGSVDEFAGLLQSSTGLLDSTSDLLASAGTASKDAEA 248
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH---------L 284
+ + + + ++ D + E D
Sbjct: 249 LVGDAKTGLSGMHDALDAAVAAINQSLKDSAGDYDAAAKAIDEAFGAADAHVSLTVTQLR 308
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ + +NI ++ S + + QKI NT+ N+ +
Sbjct: 309 DASADMAKRASDIRDVQDNILAVERDVEGSNLPEKLKAELVQKIDIVANTVGNVANQQEL 368
Query: 345 SSQKFAELMSKIN--NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
++ ++ + + A + ++ A + + N + ++L +
Sbjct: 369 LAKHLSDAAASLETGAADARAKAQAVKDGIAEAKGSIGGVKDSYNATLKQQISDLSDAVA 428
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
++ L TV + +
Sbjct: 429 DVARRGSDMADDLGATVTDLSHAASALSGD 458
>gi|54023086|ref|YP_117328.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014594|dbj|BAD55964.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 356
Score = 45.3 bits (104), Expect = 0.018, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 42/150 (28%), Gaps = 7/150 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP------NHSLAKALIRP 89
GP + I +V L + V NG VG + + + + + + I
Sbjct: 43 GPTYALDIEF-ANVLNLPARAKVIANGAQVGTVEQVTVVPADQAPPGRGGYVVVRTAISA 101
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
L +T A +R + G +I L+T +
Sbjct: 102 SVRLPTATIAELRQNTVLGDIHIALTTPPDGFGELLAPGATIGLDHTRPPVQLEDTMAAM 161
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTT 179
++ + +I + + T
Sbjct: 162 ALFVQGGAVNQLQDIVHRINAVMPQDPRET 191
>gi|313110921|ref|ZP_07796762.1| paraquat-inducible protein B [Pseudomonas aeruginosa 39016]
gi|310883264|gb|EFQ41858.1| paraquat-inducible protein B [Pseudomonas aeruginosa 39016]
Length = 189
Score = 45.3 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS-TDSSVRFNGIPVGRIVG 70
++V+ ++ + + WL YD + +R S DG+ + V + GI VG++V
Sbjct: 15 IWVLPLVALAIGA--WLG-WRAYDQAGVLIQVRFESS-DGIQAKKTEVLYKGIAVGKVVA 70
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
L + ++ +A + + L T +
Sbjct: 71 LDVSEDIKG-VVATIEMDKEARQYLSKGTRFWL 102
>gi|187939969|gb|ACD39104.1| paraquat-inducible protein B [Pseudomonas aeruginosa]
Length = 158
Score = 45.3 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 40/93 (43%), Gaps = 8/93 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS-TDSSVRFNGIPVGRIVG 70
++V+ ++ + + WL YD + +R S DG+ + V + GI VG++V
Sbjct: 18 IWVLPLVALAIGA--WLG-WRAYDQAGVLIQVRFESS-DGIQAKKTEVLYKGIAVGKVVA 73
Query: 71 LFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
L + ++ +A + + L T +
Sbjct: 74 LDVSEDIKG-VVATIEMDKEARQYLSKGTRFWL 105
>gi|259908245|ref|YP_002648601.1| hypothetical protein EpC_15900 [Erwinia pyrifoliae Ep1/96]
gi|224963867|emb|CAX55369.1| uncharacterized protein [Erwinia pyrifoliae Ep1/96]
Length = 818
Score = 45.3 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 14/112 (12%), Positives = 26/112 (23%), Gaps = 3/112 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
LS + V F G+ VG + G L + I + +T + +
Sbjct: 701 LSVGTPVLFRGVEVGTVTGTAL-GTMADRVQITLRISKKYQHLVRNNTVFWLASGYNLKF 759
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ Q + P + E+
Sbjct: 760 GLTGGVVKTGTFQQFIQGGIAFATPPTVPLAPPASSGKHFLLEDEEPGGWRQ 811
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 14/101 (13%), Positives = 29/101 (28%), Gaps = 1/101 (0%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGL 106
+ GL++ S V F IPVGR+ ++ R + + +
Sbjct: 110 DLGGLNSGSLVYFRKIPVGRVYDYSINAGSKGVTVDVLIERRFTHLVRRESRFWNISGIK 169
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
A + + + A + + +Y
Sbjct: 170 ANVGLGGAKVELENLPALVNGAIAFDSPGESPPANTDDDYR 210
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ VR+ G+ VG + G+ + + KA I+ D L +T + T
Sbjct: 5 TPVRYQGVEVGLVEGISMT-DNLRTIKIKASIKSDMREALRENTQFWLVTP 54
>gi|118619036|ref|YP_907368.1| Mce protein, Mce5A [Mycobacterium ulcerans Agy99]
gi|118571146|gb|ABL05897.1| Mce protein, Mce5A [Mycobacterium ulcerans Agy99]
Length = 510
Score = 45.3 bits (104), Expect = 0.019, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSL 82
+ + + + V + DGL S V+++G+ VG + G+ PN+
Sbjct: 33 IALLVKSTGRLN-DYVRVTADLRNVGDGLPKRSDVKYHGVLVGMVDGVAPAANGRPNYVH 91
Query: 83 AKALIRPDTPLYPSTTATIRTQGLA 107
+ + TA + +
Sbjct: 92 INLKPEYAASIPAAVTARVVPSSVF 116
>gi|167031661|ref|YP_001666892.1| hypothetical protein PputGB1_0645 [Pseudomonas putida GB-1]
gi|166858149|gb|ABY96556.1| Mammalian cell entry related domain protein [Pseudomonas putida
GB-1]
Length = 769
Score = 45.3 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 7/96 (7%), Positives = 24/96 (25%), Gaps = 1/96 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + + + + + S+
Sbjct: 403 VLFADTLGSLEVGSPVMYRQVKVGSVQSYQFARNSNRILIGVHIEKEYEKLVNGSSRFWN 462
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ + + +T+ +
Sbjct: 463 VSGITLTGGLSGIKIKSESLQTLMAGGIAFDTPRPD 498
Score = 45.3 bits (104), Expect = 0.020, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 1/114 (0%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAK 84
+ L S + +I DGL +++RF G+ VG I + L + A+
Sbjct: 508 FRLHDSQEAVNRAGTLITIRVDRADGLKPGTAIRFRGLDVGSIESVDLTDDLQAVLLRAR 567
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
D T + L + L TL + Q A +
Sbjct: 568 ITEAADRIARAGTQFWVVKPALGLVRTENLDTLIGGQYLEVQPAAKDRGPQRDF 621
Score = 44.9 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 2 ESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSV 58
+++ + ++++ + + L + + Y E+ +R S +G+ + + V
Sbjct: 11 KTRPASNWSAIWILPLIALMIGGWLAWQA-----YSSAGVEIEVRF-ESGEGIVANKTEV 64
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDT--PLYPSTTATI 101
+ G+PVG++ L LD E N +A + L T +
Sbjct: 65 IYKGMPVGKVKNLVLDAEGDNQGVIATIEMNKAAEPHLTKGTRFWL 110
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 31/134 (23%), Gaps = 1/134 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ DS V + I VGR+ L ++ + + T + +
Sbjct: 173 LNRDSPVFYKQIQVGRVKSYRLSEDQSTVEVKVFIEPAYASLVRKHTRFWNASGVSIDAS 232
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +I +P R K+ +
Sbjct: 233 LSGVKVRSESLSSIVAGGIAFATPEYRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKLSD 292
Query: 171 NIEKPLTTTIANIE 184
T +
Sbjct: 293 YEGLQAGRTPVMYK 306
>gi|296389367|ref|ZP_06878842.1| mce-related protein [Pseudomonas aeruginosa PAb1]
Length = 196
Score = 45.3 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 18/30 (60%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ DGL + +RF G+ +G+I + L+ +
Sbjct: 155 DNADGLREGTPIRFKGLDIGKIESVELNPD 184
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 7/95 (7%), Positives = 25/95 (26%), Gaps = 1/95 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + + + + + VG + L ++ + + ST
Sbjct: 29 VLTSDKLGSIDIGAPILYRQVRVGSVQSYQLSRDRQRVVVGVHIEPEYAHLVNTSTRFWN 88
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
+ + + +T+ + R
Sbjct: 89 SSGITLTGNLSGVQVKSESLQTLITGGISFDTRDP 123
>gi|330504775|ref|YP_004381644.1| hypothetical protein MDS_3861 [Pseudomonas mendocina NK-01]
gi|328919061|gb|AEB59892.1| hypothetical protein MDS_3861 [Pseudomonas mendocina NK-01]
Length = 767
Score = 45.3 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 18/62 (29%), Gaps = 1/62 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ + + S V + I VG + L ++ L + ST
Sbjct: 400 VLFTDQLGSIEVGSPVLYRQIKVGSVQSYQLGRDNSQVVLGVHIEPDYVHLVNTSTRFWN 459
Query: 102 RT 103
+
Sbjct: 460 AS 461
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 1/89 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
DGL + VR+ G+ VG++ L L + L + + T + L
Sbjct: 528 DGDGLQPGTLVRYKGLEVGKVENLSLTDDLQAVILNVRITQATEQIAREGTQFWVVKPEL 587
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRA 135
+ L TL + Q A + R
Sbjct: 588 SLTRAANLGTLVSGQYLEVQPAGLKGPRR 616
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVG 70
++V+ ++ WL+ Y +V + S +G+ + + + G+ VG++
Sbjct: 18 IWVLPLIALMIGG--WLA-WRAYSDAGIQVELIF-ASGEGIQAGKTELMYKGMAVGKVTA 73
Query: 71 LFLDQ-EYPNHSLAKALIRPDTP--LYPSTTATI 101
+ LD E +AK + + L T +
Sbjct: 74 ISLDDSEKNRGVVAKLEVNQELEQYLRSGTRFWL 107
Score = 40.3 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 35/151 (23%), Gaps = 3/151 (1%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L+ DS V + I VGR+ L E + K I P + T +
Sbjct: 170 LNRDSPVFYRQIQVGRVKSYTL-GEDQSTVEVKVFIEPAYANLVRKHTRFWNASGISVDA 228
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ +I +P + + + +
Sbjct: 229 DLSGFKLRSESLASIVAGGIAFATPEHRKDSPPTDPSLPFRLYEDYDEAQAGIKVVVTLT 288
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKM 200
+ T + I + +
Sbjct: 289 DFEGLQEGRTPVMYKGIQVGSLKTMKVDRDL 319
>gi|120403835|ref|YP_953664.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
gi|119956653|gb|ABM13658.1| virulence factor Mce family protein [Mycobacterium vanbaalenii
PYR-1]
Length = 397
Score = 45.3 bits (104), Expect = 0.021, Method: Composition-based stats.
Identities = 22/255 (8%), Positives = 72/255 (28%), Gaps = 5/255 (1%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
V + GL + D+ V+ +G VG + + +
Sbjct: 29 GLFRGSFTKTVPVTVLSQR--AGLVMNADAKVKLHGAQVGSVHSIEALPDGRAAIHLAMD 86
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + G ++E + + + + +
Sbjct: 87 PSYMDIIPSDVRVDIASSTVFGSKFVELVPPADPSAQPLQPGQVLDAEHVTVEINTVFEQ 146
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
A+ K++ + + + L +A+++ + + ++ ++ +
Sbjct: 147 LSSVLAKIEPAKLNQTLGALATAFDGRGDQLGQMMADVDGLLAEIEPSLPVMEHELAVAP 206
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ T + + ++ +L ++ S+N ++ +
Sbjct: 207 QVIGTYADVAQELVDTVEAVTTISQTVIDEQDNLDSLLVSVIGLSDNGIEVVGGNRQAIT 266
Query: 266 DVRETTQTFQEVGQK 280
DV E ++ +
Sbjct: 267 DVMELLVPTTDLLNR 281
>gi|58530840|ref|NP_004406.2| desmoplakin isoform I [Homo sapiens]
gi|115502381|sp|P15924|DESP_HUMAN RecName: Full=Desmoplakin; Short=DP; AltName: Full=250/210 kDa
paraneoplastic pemphigus antigen
gi|3702136|emb|CAA19927.1| desmoplakin [Homo sapiens]
gi|119575619|gb|EAW55215.1| desmoplakin [Homo sapiens]
Length = 2871
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 33/370 (8%), Positives = 114/370 (30%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1312 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1371
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 1372 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDIQ 1431
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 1432 QQKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLID 1491
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + + + ++ +R
Sbjct: 1492 KETNDRKCLEDENARLQRVQYDLQKANSSA--TETINKLKVQEQELTRLRIDYERVSQER 1549
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I +N L QK E ++++ ++ L ++ + + ++ +
Sbjct: 1550 TVKDQDITRFQNSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 1609
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T + E + ++
Sbjct: 1610 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLL 1669
Query: 438 WGREKGSVKI 447
E+ SVK
Sbjct: 1670 Q--EQESVKQ 1677
>gi|119603829|gb|EAW83423.1| laminin, beta 1, isoform CRA_a [Homo sapiens]
Length = 1810
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 1466 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 1525
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1526 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1585
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 1586 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1645
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1646 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1682
>gi|114615464|ref|XP_001165530.1| PREDICTED: laminin, beta 1 isoform 2 [Pan troglodytes]
Length = 1754
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 1442 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1658
>gi|114615462|ref|XP_001165567.1| PREDICTED: laminin, beta 1 isoform 3 [Pan troglodytes]
Length = 1808
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 1464 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 1523
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1524 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1583
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 1584 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1643
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1644 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1680
>gi|114615458|ref|XP_001165635.1| PREDICTED: laminin, beta 1 isoform 5 [Pan troglodytes]
gi|114615460|ref|XP_001165667.1| PREDICTED: laminin, beta 1 isoform 6 [Pan troglodytes]
Length = 1786
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 1442 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1658
>gi|114615456|ref|XP_001165596.1| PREDICTED: laminin, beta 1 isoform 4 [Pan troglodytes]
Length = 1872
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 1528 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 1587
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1588 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1647
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 1648 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1707
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1708 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1744
>gi|38197240|gb|AAH26018.2| LAMB1 protein [Homo sapiens]
Length = 1083
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 739 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 798
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 799 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 858
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 859 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 918
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 919 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 955
>gi|186837|gb|AAA59482.1| laminin B1 [Homo sapiens]
gi|186876|gb|AAA59485.1| laminin B1 [Homo sapiens]
gi|186913|gb|AAA59486.1| laminin B1 [Homo sapiens]
gi|168275776|dbj|BAG10608.1| laminin subunit beta-1 precursor [synthetic construct]
Length = 1786
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 1442 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1658
>gi|1147813|gb|AAA85135.1| desmoplakin I [Homo sapiens]
Length = 2871
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 33/370 (8%), Positives = 114/370 (30%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1312 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1371
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 1372 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDIQ 1431
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 1432 QQKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLID 1491
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + + + ++ +R
Sbjct: 1492 KETNDRKCLEDENARLQRVQYDLQKANSSA--TETINKLKVQEQELTRLRIDYERVSQER 1549
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I +N L QK E ++++ ++ L ++ + + ++ +
Sbjct: 1550 TVKDQDITRFQNSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 1609
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T + E + ++
Sbjct: 1610 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLL 1669
Query: 438 WGREKGSVKI 447
E+ SVK
Sbjct: 1670 Q--EQESVKQ 1677
>gi|88861155|ref|ZP_01135789.1| mce family protein [Pseudoalteromonas tunicata D2]
gi|88816877|gb|EAR26698.1| mce family protein [Pseudoalteromonas tunicata D2]
Length = 170
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 23/116 (19%), Positives = 43/116 (37%), Gaps = 2/116 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
S+ VG FV + ++ + G + ++ L S ++ G
Sbjct: 2 SRKIEILVGFFVSLGILALVLLALKVANAGISGGGETYNLYAKFDNIGSLKVRSPIKVGG 61
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTL 117
+ VGR+ + LD + I + L +T+ I T G+ G Y+ L+
Sbjct: 62 VVVGRVEAINLDPKDYTPV-VHMKISSEFNQLSETTSVNILTSGILGEQYLGLNPG 116
>gi|167614504|ref|NP_002282.2| laminin subunit beta-1 precursor [Homo sapiens]
gi|317373377|sp|P07942|LAMB1_HUMAN RecName: Full=Laminin subunit beta-1; AltName: Full=Laminin B1 chain;
AltName: Full=Laminin-1 subunit beta; AltName:
Full=Laminin-10 subunit beta; AltName: Full=Laminin-12
subunit beta; AltName: Full=Laminin-2 subunit beta;
AltName: Full=Laminin-6 subunit beta; AltName:
Full=Laminin-8 subunit beta; Flags: Precursor
gi|51095145|gb|EAL24388.1| laminin, beta 1 [Homo sapiens]
gi|109731041|gb|AAI13456.1| Laminin, beta 1 [Homo sapiens]
gi|119603830|gb|EAW83424.1| laminin, beta 1, isoform CRA_b [Homo sapiens]
Length = 1786
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 1442 QKAMDLDQDVLSALAEVEQLSKMVSEAKLRADEAKQSAEDILLKTNATKEKMDKSNEELR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 1658
>gi|183983839|ref|YP_001852130.1| Mce protein, Mce5A [Mycobacterium marinum M]
gi|183177165|gb|ACC42275.1| Mce protein, Mce5A [Mycobacterium marinum M]
Length = 510
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 2/85 (2%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSL 82
+ + + + V + DGL S V+++G+ VG + G+ PN+
Sbjct: 33 IALLVKSTGRLN-DYVRVTADLRNVGDGLPKRSDVKYHGVLVGMVDGVAPAANGRPNYVH 91
Query: 83 AKALIRPDTPLYPSTTATIRTQGLA 107
+ + TA + +
Sbjct: 92 INLKPEYAASIPAAVTARVVPSSVF 116
>gi|229494440|ref|ZP_04388203.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
gi|229318802|gb|EEN84660.1| virulence factor Mce family protein [Rhodococcus erythropolis
SK121]
Length = 357
Score = 45.3 bits (104), Expect = 0.022, Method: Composition-based stats.
Identities = 27/281 (9%), Positives = 69/281 (24%), Gaps = 4/281 (1%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G + + L VR VGR+ + ++ I D
Sbjct: 34 RGLPGESYPLNMEFVD-ASLLPVGGEVRIGQAVVGRVTSMS---AQTFAAVVHTEIASDI 89
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
L T A I G ++ L I + + + +
Sbjct: 90 ELPVGTRARIELSTPIGDAFVNLEVPVDPAGPILEPGSTIERSETVRGPDVAQLLGAVGT 149
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
++ + + + ++ T + + T L + + S
Sbjct: 150 LLNGSGLAQVKNIVSEADQILDGREETIRDLLARLDTFLGTLDDRKESINSALDSLNRLS 209
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ D + + +L+ + + ++ + + + E T
Sbjct: 210 ALIGDESATIDEGLRTLTPALGVIADQRQPLLDLLDETDRLSTATNSVLDQSADQISEIT 269
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + M + + + L A +
Sbjct: 270 GRLSPILDQFSAMGPTLGETMANLDNARVLLERASPGDYVN 310
>gi|323257192|gb|EGA40894.1| mce-related protein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
Length = 305
Score = 45.3 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 11/107 (10%), Positives = 24/107 (22%), Gaps = 3/107 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L+ + V F GI VG + G+ L + + I + ++ + +
Sbjct: 195 AGSLNIGTPVLFRGIEVGTVTGMSL-GSLSDRVMITLRISKRYQYLVRNNSVFWLASGYS 253
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ P +
Sbjct: 254 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQAGKHFLLQE 300
>gi|33151597|ref|NP_872950.1| hypothetical protein HD0369 [Haemophilus ducreyi 35000HP]
gi|33147817|gb|AAP95339.1| conserved hypothetical protein [Haemophilus ducreyi 35000HP]
Length = 884
Score = 45.3 bits (104), Expect = 0.023, Method: Composition-based stats.
Identities = 14/129 (10%), Positives = 31/129 (24%), Gaps = 6/129 (4%)
Query: 30 RSNQYDGPMAEVIIRIP-----GSVDGLSTDSSVRFNGIPVGRIVGLFLDQ-EYPNHSLA 83
D P G+ ++ V + G+ VG + L L +
Sbjct: 740 NLIDTDTNKTTYANNFPIIVETSDARGIEVNAPVLYRGLQVGIVQRLQLSELADRIQIHL 799
Query: 84 KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
+ + +T + I+ +S + + E + P
Sbjct: 800 AIEKQYQHLIRNNTQFWAASGYTMDISLQGVSLNSGTMAQLLKGGIEFLTPSTRVVEPQA 859
Query: 144 INYFISNAE 152
+
Sbjct: 860 KPNRRFLLQ 868
Score = 43.8 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 14/92 (15%), Positives = 31/92 (33%), Gaps = 7/92 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + + IR + DG+ + VR+ G+ +G++ +
Sbjct: 22 FWLLPIVAFIIGALLF--FQILKEQGETIKIRF-NAGDGIVAGKTIVRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ + +A I + L TT +
Sbjct: 79 YFV-DDLKKVEVQAQINSEAKSVLREGTTFWL 109
>gi|313496974|gb|ADR58340.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 766
Score = 44.9 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 1/114 (0%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAK 84
+ L S + +I DGL +++RF G+ VG I + L + A+
Sbjct: 505 FRLHDSQEAVNRAGTLITIRVERADGLKPGTAIRFRGLDVGSIESVDLTDDLQAVLLRAR 564
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
D T + L + L TL + Q A +
Sbjct: 565 ITEAADRIARAGTQFWVVKPALGLVRTENLDTLIGGQYLEVQPAAKNRGPQRDF 618
Score = 44.9 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 7/96 (7%), Positives = 24/96 (25%), Gaps = 1/96 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + + + + + S+
Sbjct: 400 VLFADTLGSLEIGSPVTYRQVKVGSVQSYQFARNSNRILIGVHIEKEYEKLVNGSSRFWN 459
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ + + +T+ +
Sbjct: 460 VSGITLTGGLSGIKIKSESLQTLMAGGIAFDTPRPD 495
Score = 44.5 bits (102), Expect = 0.038, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 12/106 (11%)
Query: 2 ESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSV 58
+++ + ++++ + + L + + Y E+ +R S +G+ + + V
Sbjct: 8 KTRPASNWSAIWILPLIALMIGGWLAWQA-----YRDAGVEIEVRF-ESGEGIVANKTEV 61
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDT--PLYPSTTATI 101
+ G+PVG++ L LD + +A + L T +
Sbjct: 62 IYKGMPVGKVKSLVLDAKGDTQGVIATIEMNKAAEPHLTKGTRFWL 107
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 31/134 (23%), Gaps = 1/134 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ DS V + I VGR+ L ++ + + T + +
Sbjct: 170 LNRDSPVFYKQIQVGRVKSYRLSEDQSTVEVKVFIEPAYASLVRKHTRFWNASGVSIDAS 229
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +I +P R K+ +
Sbjct: 230 LSGVKVRSESLSSIVAGGIAFATPEYRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKLSD 289
Query: 171 NIEKPLTTTIANIE 184
T +
Sbjct: 290 YEGLQAGRTPVMYK 303
>gi|31432145|gb|AAP53815.1| expressed protein [Oryza sativa Japonica Group]
gi|125574829|gb|EAZ16113.1| hypothetical protein OsJ_31559 [Oryza sativa Japonica Group]
Length = 2033
Score = 44.9 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 20/257 (7%), Positives = 78/257 (30%), Gaps = 5/257 (1%)
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
++ + + + S+S + + + +
Sbjct: 183 LSFGSPEVKGSDAISNEMVNLQQEISRLLAESNSMKQQILSESERANKAENEIQVLKDTI 242
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ + S + +S++++ ++ + +++ ++ + SS
Sbjct: 243 LKLNSDKDTSLLQYNQSTERLSTLESELSKAQDDLKKLTDEMATEVQKLSSAEARNSEIQ 302
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
D M+ ++ + + E + S +E
Sbjct: 303 SELEALDQKVKMQQEELEQKQKELKSFNLTF----QEEQDKRMQAESALLSEGKELAQCQ 358
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
++ + A ++ + T + + + ++N ++ + + L+++L++ +
Sbjct: 359 EEVQRLTKEIQMANEKLNELKQTKVNLENAVSELKKEVENLTEQNRSS-ELLIQELRDEI 417
Query: 420 NHFDDCLNNFERNPQDI 436
N D N + Q +
Sbjct: 418 NSLKDSKNELQNEIQSL 434
>gi|148545890|ref|YP_001265992.1| hypothetical protein Pput_0640 [Pseudomonas putida F1]
gi|148509948|gb|ABQ76808.1| Mammalian cell entry related domain protein [Pseudomonas putida F1]
Length = 769
Score = 44.9 bits (103), Expect = 0.024, Method: Composition-based stats.
Identities = 22/114 (19%), Positives = 36/114 (31%), Gaps = 1/114 (0%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAK 84
+ L S + +I DGL +++RF G+ VG I + L + A+
Sbjct: 508 FRLHDSQEAVNRAGTLITIRVERADGLKPGTAIRFRGLDVGSIESVDLTDDLQAVLLRAR 567
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
D T + L + L TL + Q A +
Sbjct: 568 ITEAADRIARAGTQFWVVKPALGLVRTENLDTLIGGQYLEVQPAAKNRGPQRDF 621
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 7/96 (7%), Positives = 24/96 (25%), Gaps = 1/96 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATI 101
+ ++ L S V + + VG + + + + + S+
Sbjct: 403 VLFADTLGSLEIGSPVMYRQVKVGSVQSYQFARNSNRILIGVHIEKEYEKLVNGSSRFWN 462
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
+ + + +T+ +
Sbjct: 463 VSGITLTGGLSGIKIKSESLQTLMAGGIAFDTPRPD 498
Score = 44.2 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 17/106 (16%), Positives = 43/106 (40%), Gaps = 12/106 (11%)
Query: 2 ESK--NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSV 58
+++ + ++++ + + L + + Y E+ +R S +G+ + + V
Sbjct: 11 KTRPASNWSAIWILPLIALMIGGWLAWQA-----YRDAGVEIEVRF-ESGEGIVANKTEV 64
Query: 59 RFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDT--PLYPSTTATI 101
+ G+PVG++ L LD + +A + L T +
Sbjct: 65 IYKGMPVGKVKSLVLDAKGDTQGVIATIEMNKAAEPHLTKGTRFWL 110
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 15/134 (11%), Positives = 31/134 (23%), Gaps = 1/134 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
L+ DS V + I VGR+ L ++ + + T + +
Sbjct: 173 LNRDSPVFYKQIQVGRVKSYRLSEDQSTVEVKVFIEPAYASLVRKHTRFWNASGVSIDAS 232
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + +I +P R K+ +
Sbjct: 233 LSGVKVRSESLSSIVAGGIAFATPEYRKDSPPTDPSLPFRLYEDFDAAQAGIRVKVKLSD 292
Query: 171 NIEKPLTTTIANIE 184
T +
Sbjct: 293 YEGLQAGRTPVMYK 306
>gi|226365584|ref|YP_002783367.1| Mce family protein [Rhodococcus opacus B4]
gi|226244074|dbj|BAH54422.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 350
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 12/97 (12%), Positives = 27/97 (27%), Gaps = 1/97 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+ + S + V +P + + ++V + G VG + +
Sbjct: 18 VIGAAVLALGSALLVGFGTGAIVTDPVVTATLPANAGVVKAHTTVSYRGATVGTVSSVDP 77
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
Q+ + S + + L G
Sbjct: 78 GQDETGM-DIGLRPEQMQHIPASVRVRVVPRTLFGDQ 113
>gi|210610111|ref|ZP_03288273.1| hypothetical protein CLONEX_00459 [Clostridium nexile DSM 1787]
gi|210152623|gb|EEA83629.1| hypothetical protein CLONEX_00459 [Clostridium nexile DSM 1787]
Length = 725
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 45/451 (9%), Positives = 130/451 (28%), Gaps = 28/451 (6%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDS--S 57
+ + + L V+ + W + + +D G ++ + I G
Sbjct: 14 KIRKN--VIALIVILGITIVPSLYAWFNIAASWDPYGNTGDLKVAIASQDKG-YDGELIP 70
Query: 58 VRFN-GIPVGRIVGLFLDQEYPNHSLAKALIR--PDTPLYPSTTATIRTQGLAGITYIEL 114
V+ N G + L + + + A + + +
Sbjct: 71 VKLNLGDQILS----ELHENTQLNWVFTNAKDAKKGVKSGRYYAALVIPKDFSQDMMSLF 126
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
S K + I + N A P + + + + +
Sbjct: 127 SPDVTHPKITYYINEKENAIA-----PKITDKGATAVQQQVNSTFTETISKTALEAFQYV 181
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + +T++ LA ++++I + + + T + + ++ TS
Sbjct: 182 ADISKQSGDKTLTDNLATSLANISQDLSSAAGTVQAFSDMSDAASLMLDTTSEFLEQSGN 241
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
Q L + ++ + V+ + F S
Sbjct: 242 GTQDSLNALNDAGDGISSLTSAITGTTTAVNQALADNKKFYTAVSDALDSALSSFSSDSD 301
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
SA + S +T ++ +++ I + ++ + + +
Sbjct: 302 AAASALSSVGDRVQKLIDGYTSLSDSLTALKESYPILTPSVDAINRRIAEAIEHQTSIKN 361
Query: 355 KINN-----ISALKENNSLFKD----AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
++++ ++ +L D ++ + D + +NL N +
Sbjct: 362 ELDSAQSQITGTTQDATALKADVDRLIADSVQSITDVKNSFETNVKDELDNLANNVDNTG 421
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ + L+++L +V++ + N ++
Sbjct: 422 SSVSTLLQQLNNSVSNISKASDKSASNLSEV 452
>gi|254414734|ref|ZP_05028499.1| hypothetical protein MC7420_3755 [Microcoleus chthonoplastes PCC
7420]
gi|196178582|gb|EDX73581.1| hypothetical protein MC7420_3755 [Microcoleus chthonoplastes PCC
7420]
Length = 1412
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 39/425 (9%), Positives = 113/425 (26%), Gaps = 19/425 (4%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
++ L F S +I +P + G++ V + ++
Sbjct: 6 LILGALSFGVGFGLSFSVERDIKRAALTGLITLPATATGVAV---VEYRRKR--QVCD-- 58
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
+A+ R + +TQ L + ++ ++ TE
Sbjct: 59 -TLSGLQAQVAELEQREHQLNQSLSQLQNQTQTLDQSIATATTEKQQVDASLNTGQTELE 117
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
Q AT + A + + + + + + +A
Sbjct: 118 QLQTQVATQQRHKQELERAIASLTRQKQELEQDSAQLHTQLQARQDQETTLNYSLSAIAA 177
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI---LENIQVS 249
++ + + + ++ ++ ++ L++ +
Sbjct: 178 EKQRVEANIASLNDEFNQLQTQVAEEAKRQADIEQERRELEQQQHQLTSTLAQLQDQIAA 237
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
++ ++ + + Q K+ H +D + + ++ + + +
Sbjct: 238 QEIQLQEQAELTAQNQHLEQERQRLHHQIGKLQHQETDLN-QSLARIAAQEQQAQENLNL 296
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLF 369
+I Q + + ++ + + L S+I+ + +E L
Sbjct: 297 YQIQLNQLQDQIAAQETQTSQLSQELADLEQQRHQLEIYISNLESQIDTL--EQERTQLN 354
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
+ +D +N I + Q + + L +
Sbjct: 355 QSLTTVTDQQQDAENSLNALQTEISSQ-----QQIKAQLTQELAALASQKEQLTEQRRQL 409
Query: 430 ERNPQ 434
E PQ
Sbjct: 410 EIPPQ 414
>gi|326382979|ref|ZP_08204668.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
gi|326198115|gb|EGD55300.1| virulence factor Mce family protein [Gordonia neofelifaecis NRRL
B-59395]
Length = 415
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 29/83 (34%), Gaps = 4/83 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
+V +V G+ S+VR G+ VG++ + + + + + L
Sbjct: 41 GTTKVNATFTSAV-GIYEGSNVRILGVDVGKVTKVTPRGDVVDVDM---RVDRGVKLPAD 96
Query: 97 TTATIRTQGLAGITYIELSTLRK 119
A + YI+L+
Sbjct: 97 VKAVQIIPSIVADRYIQLTPAYS 119
>gi|114605377|ref|XP_518227.2| PREDICTED: desmoplakin [Pan troglodytes]
Length = 2871
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 32/370 (8%), Positives = 114/370 (30%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1312 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1371
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 1372 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDVQ 1431
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 1432 QQKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLID 1491
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + + + ++ +R
Sbjct: 1492 KETNDRKCLEDENARLQRVQYDLQKANSSA--TETINKLKVQEQELTRLRIDYERVSQER 1549
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I ++ L QK E ++++ ++ L ++ + + ++ +
Sbjct: 1550 TVKDQDITRFQSSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 1609
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T + E + ++
Sbjct: 1610 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLL 1669
Query: 438 WGREKGSVKI 447
E+ SVK
Sbjct: 1670 Q--EQESVKQ 1677
>gi|114605379|ref|XP_001165431.1| PREDICTED: desmoplakin [Pan troglodytes]
Length = 2859
Score = 44.9 bits (103), Expect = 0.025, Method: Composition-based stats.
Identities = 32/370 (8%), Positives = 114/370 (30%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1312 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1371
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 1372 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDVQ 1431
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 1432 QQKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLID 1491
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + + + ++ +R
Sbjct: 1492 KETNDRKCLEDENARLQRVQYDLQKANSSA--TETINKLKVQEQELTRLRIDYERVSQER 1549
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I ++ L QK E ++++ ++ L ++ + + ++ +
Sbjct: 1550 TVKDQDITRFQSSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 1609
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T + E + ++
Sbjct: 1610 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLL 1669
Query: 438 WGREKGSVKI 447
E+ SVK
Sbjct: 1670 Q--EQESVKQ 1677
>gi|118616799|ref|YP_905131.1| MCE family lipoprotein LprK [Mycobacterium ulcerans Agy99]
gi|118568909|gb|ABL03660.1| MCE-family lipoprotein LprK (MCE-family lipoprotein Mce1E)
[Mycobacterium ulcerans Agy99]
Length = 401
Score = 44.9 bits (103), Expect = 0.026, Method: Composition-based stats.
Identities = 26/256 (10%), Positives = 68/256 (26%), Gaps = 8/256 (3%)
Query: 30 RSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ V +++P + ++G +S V +PVG I + L + I
Sbjct: 54 GAPGTGKGSYTVYVQVPDTLAING---NSKVMVADVPVGSIRNIQL---KNWVATLTLGI 107
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
L + A I L G ++EL+ + + + +
Sbjct: 108 DQGVKLPKNALAKIGQTSLLGSQHVELAAPPNPSSQLLKNGDTIPLKNSSAYPNTEQTLA 167
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ I + ++ + + + T D + H T
Sbjct: 168 SISLILRGGGIPNLEVLQNEVYDIFHGRGDQIRGFLTRLDTFTRQLNEQRDDITHAIDST 227
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ D + + + ++ + + + ++
Sbjct: 228 NRLMAYVGGRADVVDRALTDLPPLIKHFADTRDLLINAVNSVGQLSDVTGRYLSEARGNL 287
Query: 268 RETTQTFQEVGQKIDH 283
Q+ Q +++
Sbjct: 288 HTDLQSLQCPLKELGR 303
>gi|229828394|ref|ZP_04454463.1| hypothetical protein GCWU000342_00455 [Shuttleworthia satelles DSM
14600]
gi|229792988|gb|EEP29102.1| hypothetical protein GCWU000342_00455 [Shuttleworthia satelles DSM
14600]
Length = 711
Score = 44.9 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 35/420 (8%), Positives = 120/420 (28%), Gaps = 22/420 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
V L V+ L W + + +D + + +V + + + +G
Sbjct: 19 VVALVVIMGLAVIPSLYAWFNILSNWDPYGSASTRNLKVAVATEDQGADLDGARLNIG-- 76
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ +D+ N S+ + T+ L + L +
Sbjct: 77 -DIVIDKLKSNQSIGWVFVDKAETAREGVTSGQYYAALVIDRDFSTNMLSFIGGQLNHPQ 135
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
NA + +++ + L + + +
Sbjct: 136 I------------YYYENEKKNAIAPKITGKVKTTVQEEVNKAFVSSLAQGLLSAGKYIS 183
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
D + + + + +K ++
Sbjct: 184 NTDGKTPLTDAALEHLKQMDSDMTTSIGVINAYISLADSADQVKKASEALSKELQRISGD 243
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
S + + ++ + ++Q Q+ I+ L+ S +++ + + + +
Sbjct: 244 SRSKLRAAKERAESQQSQSSGSSQAGQKTADYIESQLAGVSDYLETLQ-NQLADGQELAE 302
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + + + Q +S ++ + + L+ +Q++ L ++ + +
Sbjct: 303 PKINQLETLLDGLHSQINGALSAVHLPARLQARLDTFNQRYQTLRDRLEGM------KAA 356
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ Q + + ++ + + S L+++ I + ++ ++ L++
Sbjct: 357 ARSGQSTLTLSKQAADDCGQLLSSSREILEDYQSQVKPKISASMDSIRNSMAEAGRLLSD 416
>gi|315445483|ref|YP_004078362.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315263786|gb|ADU00528.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 395
Score = 44.9 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 22/85 (25%), Gaps = 4/85 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSS--VRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
V + GL D+ V+++G VG + + +
Sbjct: 27 GLFRGSFTSTVPVTVLSQR--AGLVMDADAKVKWHGAQVGSVESIEALPDGRASIRLAMD 84
Query: 87 IRPDTPLYPSTTATIRTQGLAGITY 111
+ I + + G Y
Sbjct: 85 PSYLGIIPSDVRVDIASSTVFGSKY 109
>gi|167947468|ref|ZP_02534542.1| Mammalian cell entry related domain protein [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 155
Score = 44.9 bits (103), Expect = 0.027, Method: Composition-based stats.
Identities = 13/130 (10%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 314 SISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKD 371
+ Q + + + +++ ++ + A +
Sbjct: 27 EEQTPELMESSLQMTVEIRQAVAELRQQTGPLLKEWTQVAQDSRQLVAQADGSLQRALAS 86
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ M + K + S NL ++ +I+ +++L + + ER
Sbjct: 87 WDKTMASGDAAFVKASDSFES-AENLVKSAEPLNGEIKRALQELSAAAHSISIWADYLER 145
Query: 432 NPQDIVWGRE 441
+P+ ++ G++
Sbjct: 146 HPEALIRGKQ 155
>gi|126340557|ref|XP_001363841.1| PREDICTED: similar to laminin, beta 1 [Monodelphis domestica]
Length = 1786
Score = 44.9 bits (103), Expect = 0.028, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 72/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + +K+D D
Sbjct: 1442 QKAMDFDRDVLSALAEVEQLSKTVSEAKLRADEAKQSAQAVLLKTNATKEKVDKSNEDLR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QQSAGDIARAEMLLDEAKRASKSATDIKVTTDMVKEALEEAEKAQIAAEKAIKQADEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESETAASEETLYNASQRISELERNVEEL 1658
>gi|169631586|ref|YP_001705235.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243553|emb|CAM64581.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 401
Score = 44.9 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +V L + V+ G VG++ + + ++ I
Sbjct: 39 GIGSGGYRLTALFS-NVLNLPDSAKVKLAGADVGQVDEMHV---RNFTAVTTLRILDGVR 94
Query: 93 LYPSTTATIRTQGLAGITY 111
L +TA +R+ G +
Sbjct: 95 LPKGSTAELRSATPLGDVF 113
>gi|323495799|ref|ZP_08100868.1| methyl-accepting chemotaxis protein [Vibrio sinaloensis DSM 21326]
gi|323319141|gb|EGA72083.1| methyl-accepting chemotaxis protein [Vibrio sinaloensis DSM 21326]
Length = 541
Score = 44.9 bits (103), Expect = 0.030, Method: Composition-based stats.
Identities = 48/442 (10%), Positives = 114/442 (25%), Gaps = 25/442 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ K + ++ L + W R A V + L+ +
Sbjct: 1 MKLKTQAYLLSGIILIALLALTATGLWTLRVASNLDNKARVTELFNSAYSILTEVEKMSV 60
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA----GITYIELST 116
G+ + T L G ++ +
Sbjct: 61 EGVL----TESEAKTLATRLLRNNIYKDNEYVYVADEKMTFIATPLDPQLHGTSFHDFKD 116
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ + + E + + I
Sbjct: 117 GDGNSVGQLIQDVLGRKTGQMVEYTWTQKQADGSIEEKLSIAEKTPHWGWVVGTGIGFNE 176
Query: 177 TTTIANIETIST----VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ + ++ +
Sbjct: 177 VNARFWSTAQWQLVLCLAIAGAILAALIASIRRMLTLLGGEPQDVRKAVQDVAQGHIQTS 236
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS------ 286
+ I +Q S + + + + ++H +R F+E I L
Sbjct: 237 FSEQAPQGSIYHAVQQMSQSLAQLVENLDGSMHALRGELAHFEERAASIAQLTDSQQQST 296
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + ++ S+ ++ R++ A ++ +Q I +T++ I+ + S L +S
Sbjct: 297 EMIATAMTEMASSANNVADSASDTARNTDEADKQSQHTQQLIHNTVDNIQGLASQLGAAS 356
Query: 347 QKFAELMSKINNISALKENNSLFKD------AQRAMHTFRD-TSEKINRYIPSIGNNLQN 399
+ A+L + +NNI + + + A+ R + + NL
Sbjct: 357 KAVADLDNDVNNIVKVLDVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAG 416
Query: 400 FSQSGLNDIQNLVRKLQETVNH 421
+Q +IQ ++ LQE +
Sbjct: 417 RTQDSTKEIQQMINNLQEGSRN 438
>gi|315443157|ref|YP_004076036.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315261460|gb|ADT98201.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 385
Score = 44.5 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 10/114 (8%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYW------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
+ T ++ + L + + ++P VD + +S
Sbjct: 5 RASATMALAVTMAAAVTVSGCGWRGLNSVPLPGTQGGGPGSFTIQAQMPD-VDNVEQNSR 63
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
VR + VG + + ++L + D L + TA + L G +
Sbjct: 64 VRVGDVNVGTVSKIE---RQGWNALVTMTLNGDVNLPANATAKVGQTSLLGSQH 114
>gi|312133454|ref|YP_004000793.1| membrane protein [Bifidobacterium longum subsp. longum BBMN68]
gi|311772687|gb|ADQ02175.1| Hypothetical Membrane protein [Bifidobacterium longum subsp. longum
BBMN68]
Length = 720
Score = 44.5 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 61/434 (14%), Positives = 133/434 (30%), Gaps = 22/434 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SVRFNGIP 64
V + +V L W + + + M + + +G V+ +
Sbjct: 19 VVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEG-YRSDLIPVK---VT 74
Query: 65 VGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG + L + + +KA A + + + S + +
Sbjct: 75 VGDQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAE 134
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ RN++ A A + + + I + +
Sbjct: 135 LTYY----RNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASSLADQLSKPET 190
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E ++T AN + ++ T + S +T + D SL + + Q +
Sbjct: 191 KEQLNTFNANIANFATQLDDTADLLGTYSALTDTAGALLDTSNSLITQVSSAAKQGGKDL 250
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--SKMKSKETSAF 300
Q ++ + + +F V ID L SD + + + E
Sbjct: 251 ASAKQEVTDVAGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANAGATTAADELDRQ 310
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK--INN 358
I T + + I II+ I+ + L + A + + +
Sbjct: 311 ATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATDIRQGNQDA 370
Query: 359 ISALKENNSLFKDAQRAMHTFR-DTSEKINRYIPSIGNNLQNFS---QSGLNDIQNLVRK 414
+ +L AQ ++ + D S + I S+ + + + S SG + + +
Sbjct: 371 QDQHAQVKNLADQAQNSIANIKSDFSATVKPQIDSLSSTVADASGILSSGATQLDSTLGD 430
Query: 415 LQETVNHFDDCLNN 428
L+ T + D L++
Sbjct: 431 LKGTSDDASDMLSD 444
>gi|27378044|ref|NP_769573.1| aerotaxis receptor [Bradyrhizobium japonicum USDA 110]
gi|27351190|dbj|BAC48198.1| blr2933 [Bradyrhizobium japonicum USDA 110]
Length = 564
Score = 44.5 bits (102), Expect = 0.030, Method: Composition-based stats.
Identities = 29/357 (8%), Positives = 83/357 (23%), Gaps = 8/357 (2%)
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A + GLA + I+ + + + + R +I + +
Sbjct: 206 IAIVGFAGLATMRAIQGPMRHLNDTMLNLVQDKLDNRIVIERDDEIGEALRNLQTVQTII 265
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
E+ + + + + + + + S
Sbjct: 266 RFSRDEVQAVQRRAEEQRKAGMTKLADGFEAAIGEIVETVSSAATELEASASTLSSTAGR 325
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ + + ++ V E + S + + + E
Sbjct: 326 AQELATVVAAGSEEASTNVHSVASAAEEMSSSVHEIGRQVQDSTRIASEAVSQAHATTER 385
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
++ S ++ A N+ + + ++ + +
Sbjct: 386 VSELSRAASRIGDVVELINAIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQT 445
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ Q + ++ A+ E + E+ I N+
Sbjct: 446 AKATGEIGQQVGGIQAATQESVGAISEISGTIARLSEISSAIAAAVEQQRAATQEIARNV 505
Query: 398 QNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GREKGSVK 446
Q + D+Q + + R+ + G+ SV+
Sbjct: 506 QQAANGTQQVSSNVGDVQRGASETGSASSQVLSAAQMLSRDSNRLKLEVGKFLNSVR 562
>gi|296453384|ref|YP_003660527.1| hypothetical protein BLJ_0207 [Bifidobacterium longum subsp. longum
JDM301]
gi|296182815|gb|ADG99696.1| hypothetical protein BLJ_0207 [Bifidobacterium longum subsp. longum
JDM301]
Length = 720
Score = 44.5 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 58/439 (13%), Positives = 129/439 (29%), Gaps = 32/439 (7%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDG---------LSTDSS 57
V + +V L W + + + M + + +G ++
Sbjct: 19 VVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEGYRSDLIPMKVTVGDQ 78
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
V + L + + +KA A + + + S
Sbjct: 79 V---------VNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDD 129
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + RN++ A A + + + I +
Sbjct: 130 VQHAELTYY----RNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASSLADQL 185
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ E ++T AN ++ T + S +T + D SL + + Q
Sbjct: 186 SKPEAKEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVSSAAKQ 245
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--SKMKSK 295
+ Q ++ + + +F V ID L SD + + +
Sbjct: 246 GGKDLASAKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTAAD 305
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
E I T + + I II+ I+ + L + A + +
Sbjct: 306 ELDRQATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATDIRQ 365
Query: 356 --INNISALKENNSLFKDAQRAMHTFR-DTSEKINRYIPSIGNNLQNFS---QSGLNDIQ 409
+ + L AQ ++ + D + + I S+ + + + S SG +
Sbjct: 366 GNQDAQDQHAQVKDLADQAQNSIANIKSDFTATVKPQINSLSSTVSDASGILSSGATQLD 425
Query: 410 NLVRKLQETVNHFDDCLNN 428
+ + L+ T + D L++
Sbjct: 426 STLGDLKRTSDDASDMLSD 444
>gi|207342761|gb|EDZ70423.1| YLR383Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 1067
Score = 44.5 bits (102), Expect = 0.031, Method: Composition-based stats.
Identities = 32/389 (8%), Positives = 106/389 (27%), Gaps = 31/389 (7%)
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ------RAMITATPSGINY 146
+ + T L Y + I + +R+ R+ S
Sbjct: 96 IREGCYSAKITLHLDNSKYGAYQQGIFGNEIIVERIIKRDGPASFSLRSENGKEISNKKK 155
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
I + + +T + + + +++ + +
Sbjct: 156 DIQTVVDYFSVPVSNPMCFLSQDAARSFLTASTSQDKYSHFMKGTLLQEITENLLYASAI 215
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ ++ + + + K + + N + V +
Sbjct: 216 HDSAQENMALHLENLKSLKAEYEDAKKLLRELNQTSDLNERKMLLQAKSLWIDVAHNTDA 275
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ + QK+D + ++ + E ++ + + ++ Q
Sbjct: 276 CKNLENEISGIQQKVDEVTEKIRNRQEKIERYTSGGTTIEAQIDAKVIYVNEKDSEHQNA 335
Query: 327 K--IISTINTIENITSNLNDSSQKFAELMSKINNISAL----------------KENNSL 368
+ + + E SN ++ + K++ ++ +
Sbjct: 336 RELLRDVKSRFEKEKSNQAEAQSNIDQGRKKVDALNKTIAHLEEELTKEMGGDKDQMRQE 395
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN- 427
+ ++A R+ + + + + N ++ ++++ + R +Q +
Sbjct: 396 LEQLEKANEKLREVNNSLVVSLQDVKNEERDIQHERESELRTISRSIQNKKVELQNIAKG 455
Query: 428 ------NFERNPQDIVWGREKGSVKIYKP 450
NF+RN ++ E+ + P
Sbjct: 456 NDTFLMNFDRNMDRLLRTIEQRKNEFETP 484
>gi|114605383|ref|XP_001165463.1| PREDICTED: desmoplakin [Pan troglodytes]
Length = 2677
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 32/370 (8%), Positives = 114/370 (30%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1118 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1177
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 1178 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDVQ 1237
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 1238 QQKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLID 1297
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + + + ++ +R
Sbjct: 1298 KETNDRKCLEDENARLQRVQYDLQKANSSA--TETINKLKVQEQELTRLRIDYERVSQER 1355
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I ++ L QK E ++++ ++ L ++ + + ++ +
Sbjct: 1356 TVKDQDITRFQSSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 1415
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T + E + ++
Sbjct: 1416 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLL 1475
Query: 438 WGREKGSVKI 447
E+ SVK
Sbjct: 1476 Q--EQESVKQ 1483
>gi|268589424|ref|ZP_06123645.1| paraquat-inducible protein B [Providencia rettgeri DSM 1131]
gi|291315262|gb|EFE55715.1| paraquat-inducible protein B [Providencia rettgeri DSM 1131]
Length = 779
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 21/124 (16%), Positives = 46/124 (37%), Gaps = 9/124 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + L F + + L + ++ I S G+ + + +R+ G+ VG + +
Sbjct: 28 FWLLPLVAIFIAGWLL--FQHWAERGTDITIEFT-SAPGVVANRTPIRYQGVEVGLVQSV 84
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ--GLAGITYIELSTLRKEKKTIFQI 127
+ + + A + D L T + T LAG++ ++ +
Sbjct: 85 AISKN-MKTIIVTASVNKDMRPALNSGTKFWLVTPKASLAGVSGLDALVGGNYIGMLPST 143
Query: 128 ATER 131
TE+
Sbjct: 144 GTEQ 147
>gi|183980447|ref|YP_001848738.1| MCE family lipoprotein LprK [Mycobacterium marinum M]
gi|183173773|gb|ACC38883.1| MCE-family lipoprotein LprK (MCE-family lipoprotein Mce1E)
[Mycobacterium marinum M]
Length = 408
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 26/256 (10%), Positives = 68/256 (26%), Gaps = 8/256 (3%)
Query: 30 RSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ V +++P + ++G +S V +PVG I + L + I
Sbjct: 61 GAPGTGKGSYTVYVQVPDTLAING---NSKVMVADVPVGSIRNIQL---KNWVATLTLGI 114
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
L + A I L G ++EL+ + + + +
Sbjct: 115 DQGVKLPKNALAKIGQTSLLGSQHVELAAPPNPSSQLLKNGDTIPLKNSSAYPNTEQTLA 174
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ I + ++ + + + T D + H T
Sbjct: 175 SISLILRGGGIPNLEVLQNEVYDIFHGRGDQIRGFLTRLDTFTRQLNEQRDDITHAIDST 234
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ D + + + ++ + + + ++
Sbjct: 235 NRLMAYVGGRADVVDRALTDLPPLIKHFADTRDLLINAVNSVGQLSDVTGRYLSEARGNL 294
Query: 268 RETTQTFQEVGQKIDH 283
Q+ Q +++
Sbjct: 295 HTDLQSLQCPLKELGR 310
>gi|23465044|ref|NP_695647.1| hypothetical protein BL0447 [Bifidobacterium longum NCC2705]
gi|23325651|gb|AAN24283.1| hypothetical membrane protein with similarity to phage infection
protein [Bifidobacterium longum NCC2705]
Length = 720
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 61/434 (14%), Positives = 134/434 (30%), Gaps = 22/434 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SVRFNGIP 64
V + +V L W + + + M + + +G V+ +
Sbjct: 19 VVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEG-YRSDLIPVK---VT 74
Query: 65 VGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG + L + + +KA A + + + S + +
Sbjct: 75 VGDQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAE 134
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ RN++ A A + + + I + +
Sbjct: 135 LTYY----RNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASSLADQLSKPEA 190
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E ++T AN + ++ T + S +T + D SL + + Q +
Sbjct: 191 KEQLNTFNANIANFATQLDDTADLLGTYSALTDTAGALLDTSNSLITQVSSAAKQGGKDL 250
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--SKMKSKETSAF 300
Q ++ + + +F V ID L SD + + + E+
Sbjct: 251 ASAKQEVTDVAGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANAGATTAADESDRQ 310
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK--INN 358
I T + + I II+ I+ + L + A + + +
Sbjct: 311 ATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATDIRQGNQDA 370
Query: 359 ISALKENNSLFKDAQRAMHTFR-DTSEKINRYIPSIGNNLQNFS---QSGLNDIQNLVRK 414
+ +L AQ ++ + D S + I S+ + + + S SG + + +
Sbjct: 371 QDQHAQVKNLADQAQNSIANIKSDFSATVKPQIDSLSSTVSDASGILSSGATQLDSTLGD 430
Query: 415 LQETVNHFDDCLNN 428
L+ T + D L++
Sbjct: 431 LKGTSDDASDMLSD 444
>gi|209694102|ref|YP_002262030.1| toluene tolerance protein Ttg2C [Aliivibrio salmonicida LFI1238]
gi|208008053|emb|CAQ78192.1| toluene tolerance protein Ttg2C [Aliivibrio salmonicida LFI1238]
Length = 164
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 2/129 (1%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
++ VG FV++ + ++ I ++ L + S V+ G
Sbjct: 4 TRKIELLVGFFVLAGAAALLMLLLKVADVRSGGSGEYYTINAQFDNIGSLKSRSPVKIGG 63
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEK 121
+ VGR+ G+ LD E I ++ A I T GL G Y+ + ++
Sbjct: 64 VVVGRVSGITLDIESYLPV-VSMQIDKQFGQFPETSAAQILTAGLIGEQYVGIVPGFIDE 122
Query: 122 KTIFQIATE 130
+
Sbjct: 123 DIDMLGEGD 131
>gi|183985668|gb|AAI66177.1| LOC100158525 protein [Xenopus (Silurana) tropicalis]
Length = 1601
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 84/289 (29%), Gaps = 3/289 (1%)
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+N KK+ + +++ ++ E T + I +
Sbjct: 951 LQNEKKKMQAHVQDLEEQLDEEEAARQKLQLEKVTAEAKIKKMEEDILVLEDQNSKFLKE 1010
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + ++ + N+ I K R+
Sbjct: 1011 KKLLEERIAESTSQLAEEEEKAKNLAKLKNKQEMMITDLEERLKKEEKTRQELEKAKRKL 1070
Query: 271 TQTFQEVGQKIDHLLSDFSSK--MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
++ +I L + +K+ +A + + ++ + + + +I
Sbjct: 1071 DGETTDLQDQIAELQAQIEELKLQLAKKEEELQAALARGDEEVLQKNNTLKVVRELQAQI 1130
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNI-SALKENNSLFKDAQRAMHTFRDTSEKIN 387
+E+ ++ N + ++ +L ++ + + L++ Q ++
Sbjct: 1131 AELQEDLESEKASRNKAEKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAELK 1190
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ I N + Q + +L E + N E+N Q +
Sbjct: 1191 KSIEEETRNHEAQIQEMRQRQATALEELSEQLEQAKRFKGNLEKNKQSL 1239
>gi|90424870|ref|YP_533240.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB18]
gi|90106884|gb|ABD88921.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB18]
Length = 567
Score = 44.5 bits (102), Expect = 0.032, Method: Composition-based stats.
Identities = 19/231 (8%), Positives = 68/231 (29%), Gaps = 16/231 (6%)
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + + N+Q ++ + + V V+++ + E +
Sbjct: 323 TSTAERSQQLATVVAAASEEASTNVQSVASATEEMTSSVHEISRQVQDSARIAHEAVDQA 382
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSN-----MRSSISAIREITDQRQKIISTINTIE 336
K+ + + ++ + ++ + + + ++
Sbjct: 383 RKTNDRVGELSKAAARIGDVIELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVK 442
Query: 337 NITSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ ++ + + ++ I ++++A+KE + T E+
Sbjct: 443 ALAEQTAKATGEIGQQITGIQAATEDSVAAIKEISDTIGKMSEIASTIASAVEQQGAATQ 502
Query: 392 SIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
I N+Q +Q D+Q + + + R+ +
Sbjct: 503 EISRNVQQAAQGTQQVSANISDVQRGASETGSASSEVLSAAQSLSRDSNRL 553
>gi|119870734|ref|YP_940686.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|119696823|gb|ABL93896.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 383
Score = 44.5 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 27/253 (10%), Positives = 65/253 (25%), Gaps = 18/253 (7%)
Query: 35 DGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
V + P GL T++ V++ GI +G + + + + IR D
Sbjct: 20 FTSTDTVTVVSPR--AGLVMETEAKVKYRGIQIGEVKEIEYAGD---RAKLTLAIRSDEM 74
Query: 93 --LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ + I + G +E + Q + + +N
Sbjct: 75 KYIPANAPVRIAGTTVFGAKSVEFIP----PENAQQTSLRPGAEVQASNVQLEVNTLFQT 130
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ KI + + N + + +L ++ ++
Sbjct: 131 LTDVLGKIDPI-----NLNATLSALGEGLRGNGDDMGALLEGLNYYVGQLNPKLPTLQED 185
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
I I N I++ + + ++ N +
Sbjct: 186 LRKAGVVANIYGDAGPGIARILDNAPTISNTIVDQQHNLNTTLLAATGLANNGTATLEPA 245
Query: 271 TQTFQEVGQKIDH 283
+ Q++
Sbjct: 246 ADNYIAAIQRLRA 258
>gi|297202427|ref|ZP_06919824.1| large Ala/Glu-rich protein [Streptomyces sviceus ATCC 29083]
gi|297148112|gb|EDY54085.2| large Ala/Glu-rich protein [Streptomyces sviceus ATCC 29083]
Length = 497
Score = 44.5 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 30/358 (8%), Positives = 99/358 (27%), Gaps = 9/358 (2%)
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
A I+ L ELS +R + + I Q E+ R + + +++
Sbjct: 92 AQIQADQLRQDAERELSQVRAQTQRILQEHAEQAARLQAELHQEAVTRRQQLDQELAERR 151
Query: 159 SDSSRHIQKI----IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
H+ + + + + +E ++
Sbjct: 152 QTVESHVNENVAWAEQLRARSESQARRLLEESRAEAEQAMAAARAEAERVTTEARQRLQS 211
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
T+ L + + + + + + + + R+ T+
Sbjct: 212 EAEAARTEAEQLLRRARADAERLLEAASTQAQEATDHAEQLRTSTATESDSARRQATELS 271
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ Q++ E A + + + + ++++ +
Sbjct: 272 RAAEQRMAEAEEALRKAQAEAEKVLTEAKSAAEKTLASAESANEQRTRTAKEQVARLVTE 331
Query: 335 IENITSNLNDSSQK-FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
++++ A+ ++ I + A+ + ++ +
Sbjct: 332 ASEEAEATKATAEQIVADARAEAEKIVTEAAEKARTLTAEESATQLSKAAKTAEDVLNKA 391
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ Q +++ + + + R+ + + ++ + + G K K Y+ K
Sbjct: 392 QEDAQRTTKAAAEEAERIRREAEAEADRLRAEAHDI----AEQLKGTAKDDTKEYRAK 445
>gi|145222693|ref|YP_001133371.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
gi|145215179|gb|ABP44583.1| virulence factor Mce family protein [Mycobacterium gilvum PYR-GCK]
Length = 385
Score = 44.5 bits (102), Expect = 0.033, Method: Composition-based stats.
Identities = 17/114 (14%), Positives = 36/114 (31%), Gaps = 10/114 (8%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYW------LSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
+ T ++ + L + + ++P VD + +S
Sbjct: 5 RASATMALAVTMAAAVTVSGCGWRGLNSVPLPGTQGGGPGSFTIQAQMPD-VDNVEQNSR 63
Query: 58 VRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
VR + VG + + ++L + D L + TA + L G +
Sbjct: 64 VRVGDVNVGTVSKIE---RQGWNALVTMTLNGDVNLPANATAKVGQTSLLGSQH 114
>gi|145641076|ref|ZP_01796657.1| hypothetical protein CGSHiR3021_08401 [Haemophilus influenzae
R3021]
gi|145274237|gb|EDK14102.1| hypothetical protein CGSHiR3021_08401 [Haemophilus influenzae
22.4-21]
Length = 532
Score = 44.5 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 13/123 (10%), Positives = 30/123 (24%), Gaps = 4/123 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RP 89
I+ LS S + + G+ VG + L+ L I +
Sbjct: 395 RNKFSNGTPFILE-TRDAMNLSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 452
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ +T I + + + + + + + A
Sbjct: 453 SHLVRQNTEFWIASGYDFSLGWKGAVFNTGSVQQLLKGGISFSTPAEKEIQSQAQPNKRF 512
Query: 150 NAE 152
+
Sbjct: 513 LLQ 515
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
VI I LS ++R+ G+ VG+I + LD + AKALI P+
Sbjct: 290 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR-ITAKALINPNY 339
>gi|289671681|ref|ZP_06492571.1| PqiB family protein [Pseudomonas syringae pv. syringae FF5]
gi|330982335|gb|EGH80438.1| PqiB family protein [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 202
Score = 44.5 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 38/136 (27%), Gaps = 4/136 (2%)
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF--AELMSKINNISALKENNS 367
N + + + ++ + D K E+ +N +
Sbjct: 53 NATQVPFDVSAQPLIIPTVPGELEKMQEQVQQIIDKVGKVPVQEIAGNLNGSLGEAQKTF 112
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
DAQ + + + + G L S I ++Q +
Sbjct: 113 RLFDAQ-VIPELHGVLLQSRSTMDAAGAALAEDSPV-RQQIDRTTDEVQRMARSVRVLTD 170
Query: 428 NFERNPQDIVWGREKG 443
RNP+ ++ GR +
Sbjct: 171 YLSRNPEALIRGRTRQ 186
>gi|126322397|ref|XP_001377978.1| PREDICTED: similar to desmoplakin [Monodelphis domestica]
Length = 2883
Score = 44.5 bits (102), Expect = 0.034, Method: Composition-based stats.
Identities = 36/370 (9%), Positives = 115/370 (31%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + ++ + IN
Sbjct: 1329 SLEEAAKTIQDKNKEIERLKTEYQEEAKRRWDYENELGKVRNNYDEEIISLKNQFETEIN 1388
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ +K+ + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 1389 ITKTTIHQLTKQKEEDTSGYRTQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEENVQ 1448
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + + +++ + + Q L++ + + K +++ +
Sbjct: 1449 QQKATGSEMSQRKQQLEFELKQVTQMRSEESMRYKQSLDDAAKTIQDKNKELERLKKLIE 1508
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ +E K+ D + + I + + I+ +R
Sbjct: 1509 TETNQRKCLEEENSKLQRTQYDLQKANSNATETISKLKIHE--QELTRLRIDYERISQER 1566
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALK--ENNSLFKDAQRAMHTFRDTS 383
I+ ++ +L QK + ++++ ++ + + L + + + ++ +
Sbjct: 1567 TIKDQDISRFQSSLKDLQFQKQKVEDELNRLKKTASDECSKRKKLEDELESMRRSLKEQA 1626
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + + S+ L + VR+ Q T + E + +V
Sbjct: 1627 IKITNLTQQLEQASITKKRSEDDLRQQRDVLDGHVREKQRTQEELRKLASEVEALRRQLV 1686
Query: 438 WGREKGSVKI 447
E+ +VK
Sbjct: 1687 Q--EQENVKQ 1694
>gi|47229714|emb|CAG06910.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1389
Score = 44.5 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 22/299 (7%), Positives = 95/299 (31%), Gaps = 13/299 (4%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
++ ++ ++ + + A V ++ + +
Sbjct: 757 QHIGHHPERYCEWQMYSADHADEKCSESQAKNALAHAVQSSRHDCELLREQYEEEQEAKA 816
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + + + + + +Q+ ++ E + + + + +
Sbjct: 817 ELQRSMSKANSEVAQWRSKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNAKCASLE 876
Query: 272 QTFQEVGQKIDHLLSDFS-SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+T Q + +++ L+ D + + N + + + + QK
Sbjct: 877 KTKQRLQGEVEDLMIDVDRANALAASLDKKQRNFDKVLAEWKQKYEESQAELEGAQKEAR 936
Query: 331 TI-NTIENITSNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRAMHTF---RDTSE- 384
++ + + ++ ++ + L + N+ + + + + +H + T+E
Sbjct: 937 SLSTELFKMKNSYEEALDQLETLKRENKNLQQEISDLTEQIGETGKTIHELEKGKKTAES 996
Query: 385 ---KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
++ + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 997 EKCELQTSLEEAEATLEHEESKILRIQLELTQVKSEIDRKLAEKDEEMEQIKRNSQRVI 1055
>gi|151940904|gb|EDN59286.1| structural maintenance of chromosomes [Saccharomyces cerevisiae
YJM789]
Length = 1114
Score = 44.5 bits (102), Expect = 0.035, Method: Composition-based stats.
Identities = 32/389 (8%), Positives = 106/389 (27%), Gaps = 31/389 (7%)
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ------RAMITATPSGINY 146
+ + T L Y + I + +R+ R+ S
Sbjct: 143 IREGCYSAKITLHLDNSKYGAYQQGIFGNEIIVERIIKRDGPASFSLRSENGKEISNKKK 202
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
I + + +T + + + +++ + +
Sbjct: 203 DIQTVVDYFSVPVSNPMCFLSQDAARSFLTASTSQDKYSHFMKGTLLQEITENLLYASAI 262
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ ++ + + + K + + N + V +
Sbjct: 263 HDSAQENMALHLENLKSLKAEYEDAKKLLRELNQTSDLNERKMLLQAKSLWIDVAHNTDA 322
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ + QK+D + ++ + E ++ + + ++ Q
Sbjct: 323 CKNLENEISGIQQKVDEVTEKIRNRQEKIERYTSDGTTIEAQIDAKVIYVNEKDSEHQNA 382
Query: 327 K--IISTINTIENITSNLNDSSQKFAELMSKINNISAL----------------KENNSL 368
+ + + E SN ++ + K++ ++ +
Sbjct: 383 RELLRDVKSRFEKEKSNQAEAQSNIDQGRKKVDALNKTIAHLEEELTKEMGGDKDQMRQE 442
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN- 427
+ ++A R+ + + + + N ++ ++++ + R +Q +
Sbjct: 443 LEQLEKANEKLREVNNSLVVSLQDVKNEERDIQHERESELRTISRSIQNKKVELQNIAKG 502
Query: 428 ------NFERNPQDIVWGREKGSVKIYKP 450
NF+RN ++ E+ + P
Sbjct: 503 NDTFLMNFDRNMDRLLRTIEQRKNEFETP 531
>gi|210630080|ref|ZP_03296242.1| hypothetical protein COLSTE_00126 [Collinsella stercoris DSM 13279]
gi|210160700|gb|EEA91671.1| hypothetical protein COLSTE_00126 [Collinsella stercoris DSM 13279]
Length = 736
Score = 44.5 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 42/444 (9%), Positives = 115/444 (25%), Gaps = 24/444 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ L V L W + + +D G + + + S G + + +G
Sbjct: 19 VIALIVAVGLVIVPVLYAWFNIAGSWDPYGNTGNLKVAVANSDAG-YKSDLIPIQ-VNMG 76
Query: 67 R--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+ L + + + + A + + + S K + +
Sbjct: 77 ESVVSSLRANDQIGWEFVNEDDALEGVKSGEYYAAVVIPKSFSADMMTLFSNDVKHAQIL 136
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + + A + + T + + + A +
Sbjct: 137 YYENQKASAIAPRVTDKAAGTVR-QQIDETFTETIGDAGLVTASSLLDFMNSDQVAAFVS 195
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ L + + + + + S T + S A + V +
Sbjct: 196 NLDGTLDSGATSLRDASDSVTSFANVIGSSTGVLQQTSDLLSQAGATSAGEGDLVADAKQ 255
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-----DHLLSDFSSKMKSKETSA 299
+ + + V + D + + DH+ + + +
Sbjct: 256 GLSSMKGALDSAVEAVNGALKDSAGNYDAAGQAIEGAFNTVGDHVDTTVAQLNSVAAAVS 315
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
+ ++ E + I + +I N + EL++K N
Sbjct: 316 QDAAKTRALQEQIRALEDEVESSQLPSAIKDELVQKIDIAQNSVGNVANQQELLAK-NLT 374
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ---------- 409
A + +A + + +D + + + ++ L+ +
Sbjct: 375 DAATTLTTHMAEANKQLQDAKDLIAQAKNDLSQVQGTYDETLKTQLSQLTDTFSGIAESS 434
Query: 410 -NLVRKLQETVNHFDDCLNNFERN 432
+ L TV+ + +N
Sbjct: 435 GAIADNLTATVDDLSSAAGSLSKN 458
>gi|331217946|ref|XP_003321651.1| hypothetical protein PGTG_03188 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300641|gb|EFP77232.1| hypothetical protein PGTG_03188 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 794
Score = 44.5 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 41/349 (11%), Positives = 102/349 (29%), Gaps = 1/349 (0%)
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
I D + +T + A + I + + P G
Sbjct: 8 ITTDMVVPDKSTLVVENNDDAYDDQSVDVNKLEPPLRTASIDQPDPRDILKAPAPHGYRP 67
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + I N + ++ E + I+ +
Sbjct: 68 RSGSLSSIKYLSHKRNGSDSHIAINRSNNNGSKVSVNEYDRQISTMQTKIINLEKELRET 127
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+SS S + + + + + + QK + KS
Sbjct: 128 QLNSSRSTSNSARLEECEEEILHWKQQCEEQKHQIKTLQANLLDERKSKSQSAEQEIQQL 187
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
R+ + Q + SD +++ + + +R S + ++
Sbjct: 188 KRQISDLNQRLQSHQTRPTSDSNNRSDDSVVERLKSEVVELIDELRQMHSRQDLLLAEQD 247
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE-K 385
+ TI +EN + + + S + + + + +
Sbjct: 248 RFQETIRDLENTVDLHKRRYEAAKTELRDLKRSSTIYAPKEFLPNEKLPLTQNGAIVDIH 307
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ SI + L++ + N++ +++R++ +TV+ D+ + FE NP
Sbjct: 308 FTSFTASIDDLLRSGRSNVSNELISVMRRVIDTVSTIDEDIQQFELNPN 356
>gi|108801580|ref|YP_641777.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|108771999|gb|ABG10721.1| Mammalian cell entry [Mycobacterium sp. MCS]
Length = 400
Score = 44.5 bits (102), Expect = 0.037, Method: Composition-based stats.
Identities = 27/253 (10%), Positives = 65/253 (25%), Gaps = 18/253 (7%)
Query: 35 DGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
V + P GL T++ V++ GI +G + + + + IR D
Sbjct: 37 FTSTDTVTVVSPR--AGLVMETEAKVKYRGIQIGEVKEIEYAGD---RAKLTLAIRSDEM 91
Query: 93 --LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ + I + G +E + Q + + +N
Sbjct: 92 KYIPANAPVRIAGTTVFGAKSVEFIP----PENAQQTSLRPGAEVQASNVQLEVNTLFQT 147
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ KI + + N + + +L ++ ++
Sbjct: 148 LTDVLGKIDPI-----NLNATLSALGEGLRGNGDDMGALLEGLNYYVGQLNPKLPTLQED 202
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
I I N I++ + + ++ N +
Sbjct: 203 LRKAGVVANIYGDAGPGIARILDNAPTISNTIVDQQHNLNTTLLAATGLANNGTATLEPA 262
Query: 271 TQTFQEVGQKIDH 283
+ Q++
Sbjct: 263 ADNYIAAIQRLRA 275
>gi|291455903|ref|ZP_06595293.1| hypothetical membrane protein [Bifidobacterium breve DSM 20213]
gi|291382312|gb|EFE89830.1| hypothetical membrane protein [Bifidobacterium breve DSM 20213]
Length = 720
Score = 44.5 bits (102), Expect = 0.039, Method: Composition-based stats.
Identities = 54/435 (12%), Positives = 122/435 (28%), Gaps = 24/435 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SVRFNGIP 64
V + +V L W + + + M + + +G V+ +
Sbjct: 19 VVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEG-YRSDLIPVK---VT 74
Query: 65 VGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG + L + E +K+ A + + + S + +
Sbjct: 75 VGDQVVNALRANSELDWTITSKSDAIEGAKSGKYYAAIVIPKQFSKDMMTFFSDDVQHAE 134
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ RN++ A A + + + I + +T A
Sbjct: 135 LTYY----RNEKKNALAPNLLNEGTDEVAAEINTVFAKTITSAGLEIASSLADQLSTPAV 190
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E ++T N ++ T + ++ + D +L + Q +
Sbjct: 191 KEQLNTFNTNIAGFATQLESTADLLGTYGSLTDSAGALLDTANALITQASSAAQQGSTDL 250
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
Q S+ S + + + +F V ID L +D +S +
Sbjct: 251 KGAKQGVSDVAGALSTTTEAMSNALDTSASSFGAVSDSIDKLYADANSG-ATTTADELEH 309
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-----N 357
+ S + ++ + Q S I +
Sbjct: 310 QATAVGKQTAQYTEIRNTLAGLLGDDSSIVKALDRSITRQTRLQQALNTTASDIRQGNQD 369
Query: 358 NISALKENNSLFKDAQRAMHTF-RDTSEKINRYIPSIGNNLQNFS---QSGLNDIQNLVR 413
+ + L K AQ ++ + D + + I S+ + + S + + +
Sbjct: 370 AQNQRAQVKDLAKQAQNSIASITADYASNVQPQIESLSATVADASSVLDTSAAKLNTTLG 429
Query: 414 KLQETVNHFDDCLNN 428
L+ T + D L +
Sbjct: 430 DLRSTSSDADSMLAD 444
>gi|330859781|emb|CBX70114.1| uncharacterized protein yebT [Yersinia enterocolitica W22703]
Length = 564
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 21/115 (18%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + ++ + +
Sbjct: 443 AGSLQVGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKYQQLVRQNSVFWLASGYN 501
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P K
Sbjct: 502 LEFGLTGGVVKSGTFQQFIRGGIAFATPPTTPLAPKASVNQHFLLNPQEPKDWHD 556
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +R+ GI +G++ L L E
Sbjct: 329 DASKLAAGMPIRYLGINIGQVESLKLAPERNEV 361
>gi|296141465|ref|YP_003648708.1| hypothetical protein Tpau_3791 [Tsukamurella paurometabola DSM
20162]
gi|296029599|gb|ADG80369.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 344
Score = 44.2 bits (101), Expect = 0.040, Method: Composition-based stats.
Identities = 12/76 (15%), Positives = 23/76 (30%), Gaps = 3/76 (3%)
Query: 31 SNQYDGPMAEVIIRIPGSVD-GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
S D + V G+ + V G+PVG + + + P + +
Sbjct: 38 SRLPDSDDRLALTVESADVGPGVKAGTRVTLRGVPVGEVKSVEI--PRPGQARVAIRLEQ 95
Query: 90 DTPLYPSTTATIRTQG 105
+ +R Q
Sbjct: 96 GGIRGLTDALAVRYQP 111
>gi|296138968|ref|YP_003646211.1| hypothetical protein Tpau_1241 [Tsukamurella paurometabola DSM
20162]
gi|296027102|gb|ADG77872.1| Mammalian cell entry related domain protein [Tsukamurella
paurometabola DSM 20162]
Length = 351
Score = 44.2 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 31/322 (9%), Positives = 95/322 (29%), Gaps = 14/322 (4%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSN------QYDGPMAEVIIRIPGSVDGLSTDSSVR 59
G+ V+ + S+ G V + +V L + V
Sbjct: 11 RAARTGVITVTAGAMLTGCAGMFNPSSIPAPGQPGGGSGYTVHLDFT-NVLNLPDKARVV 69
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI--ELSTL 117
F+G+ GR+ + L + ++ I + + AT++ + G TY+ + +
Sbjct: 70 FDGVNSGRLQKVTLQE---GKAVVDVKINDGVQVPNTVMATLQQDTILGDTYVALKSTPG 126
Query: 118 RKEKKTIFQIATERNQRAMITATP-SGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ +Q T + + ++ D+ + I + + L
Sbjct: 127 KPGSPLKPGDTVPLSQTKPPTQIEDILRDLANFLGSGSLMQLQDTFKRINDNLPADPQQL 186
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ I + L ++ + + + ++ +S + +
Sbjct: 187 SGVIKTVSQSVVDLGQQSDNVSQSITSVASLVNTVNSNDDLLVALLKPSDDWLGDSLSLT 246
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-KIDHLLSDFSSKMKSK 295
++L + + + + + V + G ++ ++ ++
Sbjct: 247 TGAIKVLSRLSDALAPLSFTQPLLNTSTAVVAGVIKPLMFPGWPNMNGRQANLANLEDLL 306
Query: 296 ETSAFLENIADSTSNMRSSISA 317
+ + + N++ +
Sbjct: 307 KNKILPFLASGAKVNVKEMGAN 328
>gi|29840384|ref|NP_829490.1| ABC transporter, periplasmic substrate-binding protein, putative
[Chlamydophila caviae GPIC]
gi|29834733|gb|AAP05368.1| ABC transporter, periplasmic substrate-binding protein, putative
[Chlamydophila caviae GPIC]
Length = 266
Score = 44.2 bits (101), Expect = 0.041, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 45/128 (35%), Gaps = 11/128 (8%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
GLF+ + + F + + +S E+ + + G+S +V G VG +
Sbjct: 12 GLFLCAGILGLFSVMLFTPKSRGDGKQ--EIHVAFTH-LSGVSKGMNVCLAGKIVGSVAS 68
Query: 71 LF--LDQEYPNHS------LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ +D+ S I LY T + + + G + + + + +
Sbjct: 69 VQNIMDRGICGKSGELYCYELVLKIDSGISLYKEDTFAMYSPKIIGESIVNIIPGKIRDE 128
Query: 123 TIFQIATE 130
+ A +
Sbjct: 129 SHRLYAQD 136
>gi|227545673|ref|ZP_03975722.1| phage infection protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
gi|227213789|gb|EEI81628.1| phage infection protein [Bifidobacterium longum subsp. infantis
ATCC 55813]
Length = 720
Score = 44.2 bits (101), Expect = 0.042, Method: Composition-based stats.
Identities = 61/434 (14%), Positives = 134/434 (30%), Gaps = 22/434 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SVRFNGIP 64
V + +V L W + + + M + + +G + V+ +
Sbjct: 19 VVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEG-YRSNLIPVK---VT 74
Query: 65 VGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG + L + + +KA A + + + S + +
Sbjct: 75 VGDQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAE 134
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ RN++ A A + + + I + +
Sbjct: 135 LTYY----RNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASSLADQLSKPET 190
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E ++T AN + ++ T + S +T + D SL + + Q +
Sbjct: 191 KEQLNTFNANIANFATQLDDTADLLGTYSALTDTAGALLDTSNSLITQVSSAAKQGGKDL 250
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--SKMKSKETSAF 300
Q ++ + + +F V ID L SD + + + E
Sbjct: 251 ASAKQEVTDVAGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANAGATTAADELDRQ 310
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK--INN 358
I T + + I II+ I+ + L + A + + +
Sbjct: 311 ATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATDIRQGNQDA 370
Query: 359 ISALKENNSLFKDAQRAMHTFR-DTSEKINRYIPSIGNNLQNFS---QSGLNDIQNLVRK 414
+ +L AQ ++ + D S + I S+ + + + S SG + + +
Sbjct: 371 QDQHAQVKNLADQAQNSIANIKSDFSATVKPQIDSLSSTVADASGILSSGATQLDSTLGD 430
Query: 415 LQETVNHFDDCLNN 428
L+ T + D L++
Sbjct: 431 LKGTSDDASDMLSD 444
>gi|23335681|ref|ZP_00120915.1| COG1511: Predicted membrane protein [Bifidobacterium longum DJO10A]
gi|189440109|ref|YP_001955190.1| hypothetical protein BLD_1247 [Bifidobacterium longum DJO10A]
gi|239622652|ref|ZP_04665683.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|322688359|ref|YP_004208093.1| hypothetical protein BLIF_0168 [Bifidobacterium longum subsp.
infantis 157F]
gi|322690379|ref|YP_004219949.1| hypothetical protein BLLJ_0187 [Bifidobacterium longum subsp.
longum JCM 1217]
gi|189428544|gb|ACD98692.1| Hypothetical membrane protein [Bifidobacterium longum DJO10A]
gi|239514649|gb|EEQ54516.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis CCUG 52486]
gi|291517577|emb|CBK71193.1| YhgE/Pip N-terminal domain/YhgE/Pip C-terminal domain
[Bifidobacterium longum subsp. longum F8]
gi|320455235|dbj|BAJ65857.1| conserved hypothetical protein [Bifidobacterium longum subsp.
longum JCM 1217]
gi|320459695|dbj|BAJ70315.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis 157F]
Length = 720
Score = 44.2 bits (101), Expect = 0.043, Method: Composition-based stats.
Identities = 61/434 (14%), Positives = 133/434 (30%), Gaps = 22/434 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SVRFNGIP 64
V + +V L W + + + M + + +G V+ +
Sbjct: 19 VVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEG-YRSDLIPVK---VT 74
Query: 65 VGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG + L + + +KA A + + + S + +
Sbjct: 75 VGDQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAE 134
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ RN++ A A + + + I + +
Sbjct: 135 LTYY----RNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASSLADQLSKPEA 190
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E ++T AN + ++ T + S +T + D SL + + Q +
Sbjct: 191 KEQLNTFNANIANFATQLDDTADLLGTYSALTDTAGALLDTSNSLITQVSSAAKQGGKDL 250
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--SKMKSKETSAF 300
Q ++ + + +F V ID L SD + + + E
Sbjct: 251 ASAKQEVTDVAGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTVADELDRQ 310
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK--INN 358
I T + + I II+ I+ + L + A + + +
Sbjct: 311 ATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATDIRQGNQDA 370
Query: 359 ISALKENNSLFKDAQRAMHTFR-DTSEKINRYIPSIGNNLQNFS---QSGLNDIQNLVRK 414
+ +L AQ ++ + D S + I S+ + + + S SG + + +
Sbjct: 371 QDQHAQVKNLADQAQNSIANIKSDFSATVKPQIDSLSSTVADASGILSSGATQLDSTLGD 430
Query: 415 LQETVNHFDDCLNN 428
L+ T + D L++
Sbjct: 431 LKGTSDDASDMLSD 444
>gi|149045175|gb|EDL98261.1| desmoplakin, isoform CRA_b [Rattus norvegicus]
Length = 2834
Score = 44.2 bits (101), Expect = 0.044, Method: Composition-based stats.
Identities = 38/370 (10%), Positives = 120/370 (32%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + + ++ + IN
Sbjct: 1276 SLEEAAKTIQDKNKEIERLKAEYQEEAKRRWEYENELSKVRNSYDEEIISLRNKFETEIN 1335
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + ++ + LA ++ ++ Q
Sbjct: 1336 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEVKRLKNTLAQTTENLRRVEENVQ 1395
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + ++ ++ + + Q L++ + + K +++ V
Sbjct: 1396 QQKASGSEMSQRKQQLEIELRQVSQMRTEESMRYKQSLDDAAKTIQDKNKEIERLKQLVD 1455
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ K+ + D S + + + + ++ +R
Sbjct: 1456 KETNERKCLEDENSKLQRVQYDLQKANNSA--TEAMSKLKVQEQELTRLRIDYERVSQER 1513
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS--LFKDAQRAMHTFRDTS 383
I I++ +L QK E +S++ ++ + + L ++ + + ++ +
Sbjct: 1514 TVKDQDITRIQSSLKDLQLQKQKAEEELSRLKRTASDESSKRKMLEEELEAMRRSLKEQA 1573
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + VR+ Q T + E + +V
Sbjct: 1574 VKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHVREKQRTQEELRRLSLDVEALRRQLV 1633
Query: 438 WGREKGSVKI 447
E+ +VK
Sbjct: 1634 Q--EQENVKQ 1641
>gi|190405425|gb|EDV08692.1| hypothetical protein SCRG_04323 [Saccharomyces cerevisiae RM11-1a]
Length = 1114
Score = 44.2 bits (101), Expect = 0.045, Method: Composition-based stats.
Identities = 32/389 (8%), Positives = 106/389 (27%), Gaps = 31/389 (7%)
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ------RAMITATPSGINY 146
+ + T L Y + I + +R+ R+ S
Sbjct: 143 IREGCYSAKITLHLDNSKYGAYQQGIFGNEIIVERIIKRDGPASFSLRSENGKEISNKKK 202
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
I + + +T + + + +++ + +
Sbjct: 203 DIQTVVDYFSVPVSNPMCFLSQDAARSFLTASTSQDKYSHFMKGTLLQEITENLLYASAI 262
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ ++ + + + K + + N + V +
Sbjct: 263 HDSAQENMALHLENLKSLKAEYEDAKKLLRELNQTSDLNERKMLLQAKSLWIDVAHNTDA 322
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ + QK+D + ++ + E ++ + + ++ Q
Sbjct: 323 CKNLENEISGIQQKVDEVTEKIRNRQEKIERYTSGGTTIEAQIDAKVIYVNEKDSEHQNA 382
Query: 327 K--IISTINTIENITSNLNDSSQKFAELMSKINNISAL----------------KENNSL 368
+ + + E SN ++ + K++ ++ +
Sbjct: 383 RELLRDVKSRFEKEKSNQAEAQSNIDQGRKKVDALNKTIAHLEEELTKEMGGDKDQMRQE 442
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN- 427
+ ++A R+ + + + + N ++ ++++ + R +Q +
Sbjct: 443 LEQLEKANEKLREVNNSLVVSLQDVKNEERDIQHERESELRTISRSIQNKKVELQNIAKG 502
Query: 428 ------NFERNPQDIVWGREKGSVKIYKP 450
NF+RN ++ E+ + P
Sbjct: 503 NDTFLMNFDRNMDRLLRTIEQRKNEFETP 531
>gi|296394447|ref|YP_003659331.1| mammalian cell entry-like domain-containing protein [Segniliparus
rotundus DSM 44985]
gi|296181594|gb|ADG98500.1| Mammalian cell entry related domain protein [Segniliparus rotundus
DSM 44985]
Length = 316
Score = 44.2 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 36/286 (12%), Positives = 77/286 (26%), Gaps = 13/286 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ IP S GL +S V NG GR+ + + + P+
Sbjct: 34 QKFVHFQVMIPTS-GGLLDNSPVLINGRNAGRVRAITVVP---GGLKVEGEYDAKYPVSK 89
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQ-IATERNQRAMI---TATPSGINYFISNA 151
+ I +AG Y+ + FQ A + R + T + +
Sbjct: 90 KSVLVIANLSVAGEQYLNFMQPPNNEAPFFQDGAVIDDPRQIHVSATVGDALSKASYISG 149
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT---- 207
+ + + D + +I + ++ I + + I ++ Q
Sbjct: 150 QLDPEVLDDVANTADEIFKGLDPEFEELRELINQAVRLNYEHGDEIGRVFDNLQTNLDLI 209
Query: 208 -PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
P ++ ++A + Q + + N + D
Sbjct: 210 KPLVVQLPAVAEEFQAVVGPAKAELEAFKVFGQKMTPAKWQAAERLVGVLDRHLGNIIVD 269
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + D +S M + + + NM
Sbjct: 270 GHPLLMALRPISAYFRTTYFDPASTMNALLKMLPQDGVPRVVLNMA 315
>gi|115627956|ref|XP_791309.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115940304|ref|XP_001178224.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 2356
Score = 44.2 bits (101), Expect = 0.046, Method: Composition-based stats.
Identities = 32/287 (11%), Positives = 91/287 (31%), Gaps = 3/287 (1%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
E+ + R ++ E+ + + NI+ I L + I ++
Sbjct: 295 ERIRKQYEDVYLEQEKRVRELEDATEHFQDEIRNKAKNIKDIENALKVSQKVIKELDGKV 354
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ + + + +++ Q+ + I+ K++++V
Sbjct: 355 KDKDAEIGTLESGGKKGAKAIQGLTEMVRAKDKEIQQLCDQIEDMEEALTKANERVNKAE 414
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
E + +++ +SD S++ +K+ L + +S +A
Sbjct: 415 RKKHEGIEQQNTSLSELEDKMSDMRSQLHTKDLENELLKDQLQDAKAKSKENADAIKQHY 474
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ + + + ++ + ++ E + L +N SL Q + + +
Sbjct: 475 QNLLDDSQHQLDMKEKAIQRLTKGLQEKDRLVKEYMELAKNASLPDAQQASTESI---LQ 531
Query: 385 KINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + LQ + + + +L+ D + ER
Sbjct: 532 DLRDKLADRDKALQEANDEKIKAVDAKEAELRALKQSLRDHQRDLER 578
>gi|109504778|ref|XP_225259.4| PREDICTED: desmoplakin isoform 2 [Rattus norvegicus]
gi|109505631|ref|XP_001058477.1| PREDICTED: desmoplakin isoform 2 [Rattus norvegicus]
Length = 2877
Score = 44.2 bits (101), Expect = 0.047, Method: Composition-based stats.
Identities = 38/370 (10%), Positives = 120/370 (32%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + + ++ + IN
Sbjct: 1319 SLEEAAKTIQDKNKEIERLKAEYQEEAKRRWEYENELSKVRNSYDEEIISLRNKFETEIN 1378
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + ++ + LA ++ ++ Q
Sbjct: 1379 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEVKRLKNTLAQTTENLRRVEENVQ 1438
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S + ++ ++ + + Q L++ + + K +++ V
Sbjct: 1439 QQKASGSEMSQRKQQLEIELRQVSQMRTEESMRYKQSLDDAAKTIQDKNKEIERLKQLVD 1498
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ K+ + D S + + + + ++ +R
Sbjct: 1499 KETNERKCLEDENSKLQRVQYDLQKANNSA--TEAMSKLKVQEQELTRLRIDYERVSQER 1556
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS--LFKDAQRAMHTFRDTS 383
I I++ +L QK E +S++ ++ + + L ++ + + ++ +
Sbjct: 1557 TVKDQDITRIQSSLKDLQLQKQKAEEELSRLKRTASDESSKRKMLEEELEAMRRSLKEQA 1616
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + VR+ Q T + E + +V
Sbjct: 1617 VKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHVREKQRTQEELRRLSLDVEALRRQLV 1676
Query: 438 WGREKGSVKI 447
E+ +VK
Sbjct: 1677 Q--EQENVKQ 1684
>gi|238764907|ref|ZP_04625846.1| hypothetical protein ykris0001_60 [Yersinia kristensenii ATCC
33638]
gi|238696848|gb|EEP89626.1| hypothetical protein ykris0001_60 [Yersinia kristensenii ATCC
33638]
Length = 819
Score = 44.2 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 14/106 (13%), Positives = 23/106 (21%), Gaps = 3/106 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 685 AGSLQIGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQHLVRQNTVFWLASGYN 743
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + T P AE
Sbjct: 744 LEFGLTGGVVKSGTFQQFIRGGIAFATPPHHTTGPESQCESTLLAE 789
Score = 40.3 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 11/93 (11%), Positives = 26/93 (27%), Gaps = 1/93 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
+ L++ S V + IPVG++ + + + R + T +
Sbjct: 99 DLGSLNSGSLVYYRKIPVGKVYDYNIAPDNNGVVIDVLIDRRFAKLVKNDTRFWNVSGFK 158
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITA 139
+ S + + A +
Sbjct: 159 GDFSLSGASVQMESLAALVNGAIAFDSPPNSQN 191
Score = 39.5 bits (89), Expect = 0.99, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +R+ GI +G++ L L E
Sbjct: 571 DASKLAAGMPIRYLGINIGQVESLKLAPERNEV 603
>gi|213691125|ref|YP_002321711.1| hypothetical protein Blon_0204 [Bifidobacterium longum subsp.
infantis ATCC 15697]
gi|213522586|gb|ACJ51333.1| conserved hypothetical membrane protein [Bifidobacterium longum
subsp. infantis ATCC 15697]
gi|320457181|dbj|BAJ67802.1| conserved hypothetical protein [Bifidobacterium longum subsp.
infantis ATCC 15697]
Length = 720
Score = 44.2 bits (101), Expect = 0.048, Method: Composition-based stats.
Identities = 59/432 (13%), Positives = 130/432 (30%), Gaps = 18/432 (4%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
V + +V L W + + + M + + +G + + VG
Sbjct: 19 VVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEG-YRSDLIPMK-VTVG 76
Query: 67 R--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+ L + + +KA A + + + S + +
Sbjct: 77 NQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAELT 136
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ RN++ A A + + + I + + E
Sbjct: 137 YY----RNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASSLADQLSKPEAKE 192
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++T AN ++ T + S +T + D SL + + Q +
Sbjct: 193 QLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVSSAAKQGGKDLAS 252
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--SKMKSKETSAFLE 302
Q ++ + + +F V ID L SD + + + E
Sbjct: 253 AKQGVTDVVGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTAADELDRQAT 312
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK--INNIS 360
I T + + I II+ I+ + L + A + + +
Sbjct: 313 AIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATNIRQGNQDAQD 372
Query: 361 ALKENNSLFKDAQRAMHTFR-DTSEKINRYIPSIGNNLQNFS---QSGLNDIQNLVRKLQ 416
+ L AQ ++ + D + + I S+ + + + S SG + + + L+
Sbjct: 373 QHAQVKDLADQAQNSIANIKSDFTATVKPQIDSLSSTVSDASGILSSGATQLDSTLGDLK 432
Query: 417 ETVNHFDDCLNN 428
T + D L++
Sbjct: 433 RTSDDASDMLSD 444
>gi|62185214|ref|YP_219999.1| putative ABC transporter component [Chlamydophila abortus S26/3]
gi|62148281|emb|CAH64047.1| putative ABC transporter component [Chlamydophila abortus S26/3]
Length = 267
Score = 44.2 bits (101), Expect = 0.049, Method: Composition-based stats.
Identities = 16/115 (13%), Positives = 36/115 (31%), Gaps = 11/115 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G+F+ + F + + +S E+ + + G+S +V G +G +
Sbjct: 12 GVFLCVGMLGLFSVMLFTPKSRGDGKQ--EIHVAFTH-LSGVSKGMNVCLAGQIIGSVAS 68
Query: 71 --------LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ D I LY T + + + G + + +
Sbjct: 69 VHNIMDKGISRDTRQLYCYELVLKIDSGITLYKDDTFAMYSPKIIGESIVNILPG 123
>gi|317482712|ref|ZP_07941725.1| YhgE/Pip domain-containing protein [Bifidobacterium sp.
12_1_47BFAA]
gi|316915835|gb|EFV37244.1| YhgE/Pip domain-containing protein [Bifidobacterium sp.
12_1_47BFAA]
Length = 720
Score = 44.2 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 61/434 (14%), Positives = 132/434 (30%), Gaps = 22/434 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SVRFNGIP 64
V + +V L W + + + M + + +G V+ +
Sbjct: 19 VVSIIIVIGLVMIPGLFTWFNVAACWDPFSNMKNLKFAVANVDEG-YRSDLIPVK---VT 74
Query: 65 VGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
VG + L + + +KA A + + + S + +
Sbjct: 75 VGDQVVNALRANSQLDWTITSKADAVEGARSGKYYAAIVIPKSFSKDMMTFFSDDVQHAE 134
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ RN++ A A + + + I + +
Sbjct: 135 LTYY----RNEKKNALAPNLLNEGTDEVAAEINTTFAKTITSAGLEIASSLADQLSKPEA 190
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E ++T AN ++ T + S +T + D SL + + Q +
Sbjct: 191 KEQLNTFNANIADFATRLDDTADLLGTYSALTDTAGALLDTSNSLITQVSSAAKQGGKDL 250
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--SKMKSKETSAF 300
Q ++ + + +F V ID L SD + + + E
Sbjct: 251 ASAKQEVTDVAGALGTTADAMSSALDASASSFGAVSDSIDKLYSDANDGATTVADELDRQ 310
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK--INN 358
I T + + I II+ I+ + L + A + + +
Sbjct: 311 ATAIGKQTEKYTEIRNTLAGILGNDSSIITAIDRSIARQNRLRQALNTAATDIRQGNQDA 370
Query: 359 ISALKENNSLFKDAQRAMHTFR-DTSEKINRYIPSIGNNLQNFS---QSGLNDIQNLVRK 414
+ +L AQ ++ + D S + I S+ + + + S SG + + +
Sbjct: 371 QDQHAQVKNLADQAQNSIANIKSDFSATVKPQIDSLSSTVADASGILSSGATQLDSTLGD 430
Query: 415 LQETVNHFDDCLNN 428
L+ T + D L++
Sbjct: 431 LKGTSDDASDMLSD 444
>gi|301615183|ref|XP_002937063.1| PREDICTED: myosin-10 [Xenopus (Silurana) tropicalis]
Length = 1971
Score = 44.2 bits (101), Expect = 0.050, Method: Composition-based stats.
Identities = 29/289 (10%), Positives = 84/289 (29%), Gaps = 3/289 (1%)
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+N KK+ + +++ ++ E T + I +
Sbjct: 942 LQNEKKKMQAHVQDLEEQLDEEEAARQKLQLEKVTAEAKIKKMEEDILVLEDQNSKFLKE 1001
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + ++ + N+ I K R+
Sbjct: 1002 KKLLEERIAESTSQLAEEEEKAKNLAKLKNKQEMMITDLEERLKKEEKTRQELEKAKRKL 1061
Query: 271 TQTFQEVGQKIDHLLSDFSSK--MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
++ +I L + +K+ +A + + ++ + + + +I
Sbjct: 1062 DGETTDLQDQIAELQAQIEELKLQLAKKEEELQAALARGDEEVLQKNNTLKVVRELQAQI 1121
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNI-SALKENNSLFKDAQRAMHTFRDTSEKIN 387
+E+ ++ N + ++ +L ++ + + L++ Q ++
Sbjct: 1122 AELQEDLESEKASRNKAEKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAELK 1181
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ I N + Q + +L E + N E+N Q +
Sbjct: 1182 KSIEEETRNHEAQIQEMRQRQATALEELSEQLEQAKRFKGNLEKNKQSL 1230
>gi|310639977|ref|YP_003944735.1| methyl-accepting chemotaxis sensory transducer [Paenibacillus
polymyxa SC2]
gi|309244927|gb|ADO54494.1| Methyl-accepting chemotaxis sensory transducer [Paenibacillus
polymyxa SC2]
Length = 584
Score = 43.8 bits (100), Expect = 0.053, Method: Composition-based stats.
Identities = 31/363 (8%), Positives = 95/363 (26%), Gaps = 10/363 (2%)
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
L I +T + L + E + E ++
Sbjct: 218 VLVTRRILRQVRFIKNTLEQVADGNLTVTSQQVTYDQLGEISGLTNRMVEAMSNMIVDIQ 277
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
S A ++ + H + + + + N + + +
Sbjct: 278 SSSSTL--QQASENIVVTTEGTLHQTEELSRTLQQIADVSTNQADQTLESVQQSDRLGQT 335
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ H + + ++ ++ +Q S+ + S +
Sbjct: 336 LDEVGSHVHQFTDTARHLNKVRNQVASEHEQLLEKGRESALRIKQMQRMSHALTEKSREA 395
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
N V+ + Q + S K A + + S +
Sbjct: 396 ANIGQQVQGIVKQTQILSFNASIEASRAGEAGKGFSVVAHEMG-QLAQQSAMSIREIDQI 454
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRAMHTF 379
++ ++I + + + +N+ ++ A + ++ ++ +E L +
Sbjct: 455 LSSFVEQIEQMGDQFDQNINTVNEQEKQIALCLQSVDKVTQVSEEVQELAAHLAQLTTEM 514
Query: 380 RDTSEKINRYI------PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNP 433
+ +++++ + + V++L + NN +R+
Sbjct: 515 HEVRHSVDQHLNHTASAAQQTAGMTEDVSASAQKQALAVKELSAVARNLTTLSNNLQRHA 574
Query: 434 QDI 436
Sbjct: 575 DQF 577
>gi|293189302|ref|ZP_06608025.1| hypothetical membrane protein [Actinomyces odontolyticus F0309]
gi|292821765|gb|EFF80701.1| hypothetical membrane protein [Actinomyces odontolyticus F0309]
Length = 734
Score = 43.8 bits (100), Expect = 0.054, Method: Composition-based stats.
Identities = 46/460 (10%), Positives = 124/460 (26%), Gaps = 38/460 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRF 60
+ + + + VV L W + + + G + I I + G V
Sbjct: 13 RRAHRSLIASVVVFGLVVIPSLFTWFNVAASWDPFGNTKSLRIAIANTDAG-YKSDLVPL 71
Query: 61 NGIPVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
I +G + L + + ++ T A + +
Sbjct: 72 R-INIGDSVVSALRKNDNFDWVIDSEDAAIEGTRSGEYYAAIVIPSDFSREMLTFFDGGA 130
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + ++N + A + + +S+ + + T
Sbjct: 131 SSAPMTYYVNEKKNGISPKIAGQGAEAVSAQVNQIFVQTLSEVALDTATSVGGALSAPTA 190
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + ++ + + T+ D +L + +
Sbjct: 191 VNTVTALDN----RVQTVASRLRTAADSADAYASLVGSSVTLIDSTATLVDGLGSAKGPA 246
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS-SKMKSKET 297
+ + +S +S V + + + + + ++ + ++ S S + T
Sbjct: 247 QSAVSSAQAGASGLGSAASAAVSSVSDAISSSQSSLSSLSSAVESVYANGSTSASDAAST 306
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
++ D+ + +SI S+++ ++ + L + + S+++
Sbjct: 307 LRSQASVLDTQATSFTSIKTTLGALPGSPVSQSSLDRLQGASDRLTEVANGLRAAASELD 366
Query: 358 NISALKEN-----NSLFKDAQRAMH--------TFRDTSEKINRY--------------I 390
+ A E N L A+ A+ R E + +
Sbjct: 367 SKVANAEAGHASVNGLIAQARSAVDGLSSDYETNLRPQLESLASTLASAQSSLSAARTSL 426
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ N S S + L L + +
Sbjct: 427 EGATSTASNGSGSAREGLTQLRDNLTGAATSLREAAGKLD 466
>gi|109069567|ref|XP_001085012.1| PREDICTED: desmoplakin isoform 2 [Macaca mulatta]
Length = 2871
Score = 43.8 bits (100), Expect = 0.055, Method: Composition-based stats.
Identities = 32/370 (8%), Positives = 114/370 (30%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1312 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 1371
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 1372 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDVQ 1431
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 1432 QQKATGSEASQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLID 1491
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + + + ++ +R
Sbjct: 1492 KETNERKCLEDENARLQRVQYDLQKANSSA--TESINKLKVQEQELTRLRIDYERVSQER 1549
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I ++ +L QK E ++++ ++ L ++ + + ++ +
Sbjct: 1550 TVKDQDIMRFQSSVKDLQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 1609
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T E + ++
Sbjct: 1610 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSCEVEALRRQLL 1669
Query: 438 WGREKGSVKI 447
E+ SVK
Sbjct: 1670 Q--EQDSVKQ 1677
>gi|52424872|ref|YP_088009.1| PqiB protein [Mannheimia succiniciproducens MBEL55E]
gi|52306924|gb|AAU37424.1| PqiB protein [Mannheimia succiniciproducens MBEL55E]
Length = 909
Score = 43.8 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 31/350 (8%), Positives = 92/350 (26%), Gaps = 17/350 (4%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGL 71
F + + + + G + GL + + VR+ G+ +G + +
Sbjct: 55 FWLLPIIALCIGALLFFQIIKEQGETIRITFTTGD---GLVANKTQVRYQGLQIGIVKKV 111
Query: 72 FLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ +A I P+ L +T + + + + + I+
Sbjct: 112 NFT-DDLKKVEVQASIYPEAKNVLRENTKFWL----VQPSASLAGISGLDTLISGNYISL 166
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + I+ + I + + I E
Sbjct: 167 QPGDGNYKDDFIAEETGPIAQVSDGDLLIHLLADDLGSISEGASVYYKKMPVGKIYDYRF 226
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ +++ +N I+ + ++ +++ +N I++
Sbjct: 227 TPDQKKVEIQVVIDKAYANLIKQDTRFWN-ISGINANVGPSGITVNMDSLNAIVQGAITF 285
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
S D D + T + Q+ + ++ K +
Sbjct: 286 -----DSPDNSPKAKQDQQFTLYPTLQAAQRGIEVKITLQNQAGLKAGKTEVFYNNLQVG 340
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
+ + ++ N + +N N + ++ + +
Sbjct: 341 TLAKLDNEDITHAKISGTLLLDPNISNELRTNTNIILRTPKMNLATLEKL 390
Score = 42.6 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 14/103 (13%), Positives = 36/103 (34%), Gaps = 3/103 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
++T S + + G+ VG+I + L++ L LI + ++ I + AG+
Sbjct: 789 ITTGSPIYYRGVEVGKINRMELNELGDR-VLIHLLIANKYRHLVRKNSEFWISSGYSAGV 847
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ + + + + + + P +
Sbjct: 848 GWSGIEVNTGTVQQLLKGGISFSTPSGTVIQPQAAANQRFLLQ 890
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+VI + L+ ++R+ G+ VG++ + LDQ N + KAL+ P+
Sbjct: 660 KSAGQVITLTADNATNLTKGMALRYMGLEVGQLESINLDQN-KNQVVVKALMNPNY 714
>gi|6323415|ref|NP_013487.1| Smc6p [Saccharomyces cerevisiae S288c]
gi|2500793|sp|Q12749|SMC6_YEAST RecName: Full=Structural maintenance of chromosomes protein 6;
AltName: Full=DNA repair protein RHC18; AltName:
Full=Rad18 homolog
gi|609425|gb|AAB67273.1| Ylr383wp [Saccharomyces cerevisiae]
gi|1150625|emb|CAA56902.1| RHC18 [Saccharomyces cerevisiae]
gi|285813788|tpg|DAA09684.1| TPA: Smc6p [Saccharomyces cerevisiae S288c]
Length = 1114
Score = 43.8 bits (100), Expect = 0.056, Method: Composition-based stats.
Identities = 31/389 (7%), Positives = 105/389 (26%), Gaps = 31/389 (7%)
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ------RAMITATPSGINY 146
+ + L Y + I + +R+ R+ S
Sbjct: 143 IREGCYSAKIILHLDNSKYGAYQQGIFGNEIIVERIIKRDGPASFSLRSENGKEISNKKK 202
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
I + + +T + + + +++ + +
Sbjct: 203 DIQTVVDYFSVPVSNPMCFLSQDAARSFLTASTSQDKYSHFMKGTLLQEITENLLYASAI 262
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ ++ + + + K + + N + V +
Sbjct: 263 HDSAQENMALHLENLKSLKAEYEDAKKLLRELNQTSDLNERKMLLQAKSLWIDVAHNTDA 322
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ + QK+D + ++ + E ++ + + ++ Q
Sbjct: 323 CKNLENEISGIQQKVDEVTEKIRNRQEKIERYTSDGTTIEAQIDAKVIYVNEKDSEHQNA 382
Query: 327 K--IISTINTIENITSNLNDSSQKFAELMSKINNISAL----------------KENNSL 368
+ + + E SN ++ + K++ ++ +
Sbjct: 383 RELLRDVKSRFEKEKSNQAEAQSNIDQGRKKVDALNKTIAHLEEELTKEMGGDKDQMRQE 442
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN- 427
+ ++A R+ + + + + N ++ ++++ + R +Q +
Sbjct: 443 LEQLEKANEKLREVNNSLVVSLQDVKNEERDIQHERESELRTISRSIQNKKVELQNIAKG 502
Query: 428 ------NFERNPQDIVWGREKGSVKIYKP 450
NF+RN ++ E+ + P
Sbjct: 503 NDTFLMNFDRNMDRLLRTIEQRKNEFETP 531
>gi|302554200|ref|ZP_07306542.1| large Ala/Glu-rich protein [Streptomyces viridochromogenes DSM
40736]
gi|302471818|gb|EFL34911.1| large Ala/Glu-rich protein [Streptomyces viridochromogenes DSM
40736]
Length = 1291
Score = 43.8 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 24/300 (8%), Positives = 90/300 (30%), Gaps = 6/300 (2%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++++ +++ E+ + + + + +S
Sbjct: 118 QTVESHVNENVAWAEQLRARTEQQARRLLEESRAEAEQSLATARAEAERLANEARQRLTS 177
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
++ ++ + + Q E + ++ + +T + +E +
Sbjct: 178 AAEEARAEAEQILRRARTDAERLLNAASTQAQEATDHAEQLRTSTASESESTRREAQELS 237
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ ++ + + L S+ T A S ++ + R +Q +++
Sbjct: 238 KAAEQRMAEAEEALRKAQSEADKLVTEAKEAAAKALASAESANETRTRTAKEQVARLVEE 297
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ ++ Q A+ ++ I A + A+ + +
Sbjct: 298 ATKEAE--NTKTEAEQLVADARAEAEKIVAEAAEKARTLTAEETATQLSKAARTAEEVLT 355
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + +++ + + + R+ + + ++ + G K K Y+ K
Sbjct: 356 KASEDAKKTTKAAAEEAERIRREAEAEADRLRAEAHDIAEE----LKGAAKDDTKEYRAK 411
>gi|181608|gb|AAA35766.1| desmoplakin [Homo sapiens]
Length = 1752
Score = 43.8 bits (100), Expect = 0.057, Method: Composition-based stats.
Identities = 33/370 (8%), Positives = 114/370 (30%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 193 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELSKVRNNYDEEIISLKNQFETEIN 252
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + I+ + L ++ ++ Q
Sbjct: 253 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLSEEIKRLKNTLTQTTENLRRVEEDIQ 312
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ +
Sbjct: 313 QQKATGSEVSQRKQQLEVELRQVTQMRTEESVRYKQSLDDAAKTIQDKNKEIERLKQLID 372
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ ++ + D S + + + + ++ +R
Sbjct: 373 KETNDRKCLEDENARLQRVQYDLQKANSSA--TETINKLKVQEQELTRLRIDYERVSQER 430
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE--NNSLFKDAQRAMHTFRDTS 383
I +N L QK E ++++ ++ L ++ + + ++ +
Sbjct: 431 TVKDQDITRFQNSLKELQLQKQKVEEELNRLKRTASEDSCKRKKLEEELEGMRRSLKEQA 490
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + +R+ Q T + E + ++
Sbjct: 491 IKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHLREKQRTQEELRRLSSEVEALRRQLL 550
Query: 438 WGREKGSVKI 447
E+ SVK
Sbjct: 551 Q--EQESVKQ 558
>gi|149638622|ref|XP_001514169.1| PREDICTED: similar to desmoplakin [Ornithorhynchus anatinus]
Length = 2826
Score = 43.8 bits (100), Expect = 0.060, Method: Composition-based stats.
Identities = 32/286 (11%), Positives = 97/286 (33%), Gaps = 12/286 (4%)
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+N+ + + ++ + LA ++ ++ T Q S + ++
Sbjct: 1357 DNLTRENRSLSEEVKRLKNTLAQATENLRRVEETAQQQKASGSEISQKKVQLEIELKQVT 1416
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+++ + + Q L++ + + K +++ + + ++ K+ D
Sbjct: 1417 QMRSEESMRYKQSLDDAAKTIQDKNKELERLKKLIETETSQRKALEDENAKLQRAQFDLQ 1476
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
S + + + M ++ +R I + +L QK
Sbjct: 1477 KANSS--VTETITKLRIQEQEMARLKIDYERLSQERVGKDQDIAKFQTSLKDLQFQKQKV 1534
Query: 350 AELMSKINNISALKEN--NSLFKDAQRAMHTFRDTSEKINRYIPSIGNN--LQNFSQSGL 405
E ++++ ++ + + L ++ + + ++ + KI + ++ S+ L
Sbjct: 1535 EEELNRLKKTASDESSRRKKLEEELEGMRRSLKEQAIKITNLTQQLEQASIVKKRSEDDL 1594
Query: 406 ND----IQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ VR+ Q T E + ++ E+ +VK
Sbjct: 1595 RQHRDVLDGHVREKQRTQEELRKLAAEVEVLRRQLLQ--EQENVKQ 1638
>gi|297583352|ref|YP_003699132.1| YhgE/Pip N-terminal domain-containing protein [Bacillus
selenitireducens MLS10]
gi|297141809|gb|ADH98566.1| YhgE/Pip N-terminal domain protein [Bacillus selenitireducens
MLS10]
Length = 1059
Score = 43.8 bits (100), Expect = 0.061, Method: Composition-based stats.
Identities = 47/439 (10%), Positives = 133/439 (30%), Gaps = 21/439 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSVRFNG--IPVGR 67
++ L W + S +D G V + + G V +G + +G
Sbjct: 22 AVLLVGLAILPSLYAWFNLSASWDPYGNTGGVSVAVVNEDKG------VTVDGETVNIGS 75
Query: 68 IVGLFL-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ L D E ++ + A ++ T + + + T+
Sbjct: 76 ELEASLRDNEQLGWTIVENGEARKGVEQGDYYAAVKIPEDFSETLLSVLDGEPVQSTVHY 135
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ E+ T SG + ++S + + + + L + I
Sbjct: 136 VVNEKVNAIAPKMTDSGASTITREINEQF--SKETSSLMFEAFDELGIQLEEELPTFRRI 193
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
V+ + S + K + + + + D I + ++ I+ I+ +
Sbjct: 194 RDVVMDLESQMPKALSFGDTLIQVDEDWDRLDGYVDEILAFEEQFPVIEAYAEQVIVLDE 253
Query: 247 QVSSNNF-VKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
++ + + + ++ F + ++I +F + E +
Sbjct: 254 RLDEADVAADIVLTLEGRLPEIEAAIDDFTRMTEEIPAWSDEFEDILDRGEALPEVGE-- 311
Query: 306 DSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS-QKFAELMSKINNISALKE 364
D + +R S + + + + + + + ++ + L S+++ + E
Sbjct: 312 DLQAELRRMQSELPAYEKRLDEWQEELAALSDAAGDTQETLIGETKALYSELDQLKETLE 371
Query: 365 NNS---LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN-DIQNLVRKLQETVN 420
+ +A A+ + + S+ + + D++ R++ +
Sbjct: 372 GVGDHEAWDEAADAVQDVNRELSTYDARLASLEETIVTVLTYTSSIDLEGWQREIASLRS 431
Query: 421 HFDDCLNNFERNPQDIVWG 439
+ + I G
Sbjct: 432 DIESVQDELSNQADAIRAG 450
>gi|317508285|ref|ZP_07965965.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
gi|316253460|gb|EFV12850.1| virulence factor Mce family protein [Segniliparus rugosus ATCC
BAA-974]
Length = 350
Score = 43.8 bits (100), Expect = 0.062, Method: Composition-based stats.
Identities = 33/286 (11%), Positives = 72/286 (25%), Gaps = 13/286 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ IP S GL DS V NG G+I + + E + +
Sbjct: 68 QKFVRFQVIIPAS-GGLLDDSPVLINGRLAGKIHAITVIPEG---LRVEGNYDAKYSVSA 123
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN----YFISNA 151
+ I +AG Y+ + + I P+ + ++
Sbjct: 124 KSKVVIANLSMAGEQYLNFVQPPGNEAPYLTDGVVISDPRQIHVFPTVGDALSKASSVSS 183
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ-----V 206
+ + ++D + +I + ++ + + + I ++ Q +
Sbjct: 184 QLDPEVLNDVATTADQIFQGLDPEFEELRELMNQNVRLNDQHGDEIGRVFSNIQATIELM 243
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
LI + A + Q + + D
Sbjct: 244 KGFGPQLPVLARKFEALINPTKAQLDAFKAYGEEMTPDKWQALERLVTIIDRYLSEAIAD 303
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + D S M + + + NM
Sbjct: 304 SHPLLMALKPISAYFRTTYFDPGSTMNALLKMLPQDGVPRIVLNMA 349
>gi|302551011|ref|ZP_07303353.1| virulence factor Mce family protein [Streptomyces viridochromogenes
DSM 40736]
gi|302468629|gb|EFL31722.1| virulence factor Mce family protein [Streptomyces viridochromogenes
DSM 40736]
Length = 419
Score = 43.8 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 5/62 (8%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLAGI 109
L + V+ G+ VG + + D + ++P+ + A + + L G
Sbjct: 53 LDPRADVKLRGLLVGEVREVDADG---TKARLDIALKPEYVSHIPSDVHARLLPKTLFGE 109
Query: 110 TY 111
Y
Sbjct: 110 KY 111
>gi|119945883|ref|YP_943563.1| hypothetical protein Ping_2223 [Psychromonas ingrahamii 37]
gi|119864487|gb|ABM03964.1| Mammalian cell entry related domain protein [Psychromonas
ingrahamii 37]
Length = 890
Score = 43.8 bits (100), Expect = 0.063, Method: Composition-based stats.
Identities = 8/88 (9%), Positives = 25/88 (28%), Gaps = 3/88 (3%)
Query: 44 RIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
+ GL+ ++ + + G+ +G+I L E I + ++ +
Sbjct: 397 VLTEDATGLNPEAPITYQGLKIGKITALDFS-EKAGFIAVHIDIDQQYHYLINKNSQFYL 455
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ + + +
Sbjct: 456 LNGVNFNASLKGIEVQSTPLENLISGGI 483
Score = 41.8 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 8/88 (9%), Positives = 28/88 (31%), Gaps = 3/88 (3%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
+ + + + + I + + + + + G+ +G + + LD
Sbjct: 26 AVAALLGAWFLFQNITHAN---TTIKIHFEHAESIIVDKTKLHYKGVIIGTVKKVELDAT 82
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQ 104
+ +A+ L +T + +
Sbjct: 83 SGVNIIAEIESHAKFMLRKNTKFWLVSP 110
Score = 39.9 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 13/81 (16%), Positives = 24/81 (29%), Gaps = 1/81 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA 85
Y L + + +I L T S +R G+ VG + L L + +
Sbjct: 633 YKLFNNQKQATTPTTLISLTFNQAKDLQTGSPLRLKGLVVGEVTNLTLTSQQKVQATVNL 692
Query: 86 LIRPDTPL-YPSTTATIRTQG 105
+ + + T
Sbjct: 693 KPEFAKQVARKGSRFWMVTST 713
>gi|326383827|ref|ZP_08205512.1| Mce family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326197591|gb|EGD54780.1| Mce family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 390
Score = 43.8 bits (100), Expect = 0.065, Method: Composition-based stats.
Identities = 35/287 (12%), Positives = 76/287 (26%), Gaps = 9/287 (3%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V + Y L G + DG+ + VR +GR+ + L
Sbjct: 19 AVVLSMSVSGCAYGLQDLPVGGGNGGFQVTADFKVADGVVAGADVRTGQQVIGRVTDIGL 78
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
+ + PDT L + TA + G +I L + +
Sbjct: 79 TGSG---AELTLKLEPDTVLPANVTAAVEIPSALGTAFIRLEAPENPAGRLTDGSRIEAD 135
Query: 134 RAMITATPS------GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ G S ++ +R + + + T + S
Sbjct: 136 ETSVGPQVEGTLAALGNVVAGSGLGQLESIMTSLNRAFATRSDKVGDLIDTLNRLLSRTS 195
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
A+ ++ + V + F T S+ + ++Q +
Sbjct: 196 PYTADFNRAMEAAARVSDVFAAEQGKVSEFLEQTPKAVSVLSAQRDRISSLMDQTTGLAK 255
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
++ V D + ++ L+ ++ M +
Sbjct: 256 NLDAITTGRQSELDQLVPDAEKLVAALSSFNGQVGGTLTQMNAFMTN 302
>gi|262402182|ref|ZP_06078743.1| paraquat-inducible protein B [Vibrio sp. RC586]
gi|262350964|gb|EEZ00097.1| paraquat-inducible protein B [Vibrio sp. RC586]
Length = 879
Score = 43.8 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 17/164 (10%), Positives = 40/164 (24%), Gaps = 4/164 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ + V++ G+ +G + + D E A I P A +Q
Sbjct: 650 GIKVGTPVQYQGVQIGEVFEITPDFESD-FVKLSARIEPQY---APKIAKKNSQFWLSQA 705
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
I LS + + + + + + R +
Sbjct: 706 KIGLSGIENVQNLLGHSIEVQPGTGESRFEFELHKEARHGGAGKTYTLQSEKRGSVSVGT 765
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ I+ A+ + ++ +
Sbjct: 766 PVLYRDIEVGKVIDVRLGEFADRVITTIRIAPQYTYLLRQNSVF 809
Score = 41.8 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 4/56 (7%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G + GSV + V + I VG+++ + L E+ + + I P
Sbjct: 748 GKTYTLQSEKRGSVS---VGTPVLYRDIEVGKVIDVRL-GEFADRVITTIRIAPQY 799
Score = 41.5 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 17/45 (37%), Gaps = 3/45 (6%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ GL + + + G+ VG + + L + + LI
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLD---YVEFNVLIDEQY 447
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMILAGWLVFKA-----VHDAGVRIQIHF-DNAQGLIAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLNSIYVEADIYPEATKLLSTQTRFWM 111
>gi|126433444|ref|YP_001069135.1| hypothetical protein Mjls_0835 [Mycobacterium sp. JLS]
gi|126233244|gb|ABN96644.1| Mammalian cell entry related domain protein [Mycobacterium sp.
JLS]
Length = 348
Score = 43.8 bits (100), Expect = 0.066, Method: Composition-based stats.
Identities = 13/71 (18%), Positives = 21/71 (29%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN 61
K T VG VV V I P G++ + + +
Sbjct: 9 SEKRTLTIVGTAVVLCAVAMTGIFVGFKPFGGRPDDEISVAIETPYVGPGVAKGTQLVMH 68
Query: 62 GIPVGRIVGLF 72
G+ VG + +
Sbjct: 69 GVKVGEVTAVS 79
>gi|145631478|ref|ZP_01787247.1| hypothetical protein CGSHi22421_02446 [Haemophilus influenzae
R3021]
gi|144982908|gb|EDJ90421.1| hypothetical protein CGSHi22421_02446 [Haemophilus influenzae
R3021]
Length = 819
Score = 43.4 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I+ +++ LS S + + G+ VG + L+ L I P
Sbjct: 744 RNKFSNGTPFILETRDAIN-LSEGSPILYRGVEVGTVKKFELNSLGDR-VLVHIAIMPKY 801
Score = 38.8 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 8/93 (8%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE 76
+ +I + + I + G+ D + +R+ G+ +G + + +
Sbjct: 36 IALCIGAILFF---QIVKERGTSITITFT-NGSGIVADKTQIRYQGLQIGIVKEVHFT-D 90
Query: 77 YPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
A I P+ L +T + ++
Sbjct: 91 NLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
Score = 38.0 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
VI I LS ++R+ G+ VG+I + LD +
Sbjct: 639 VITLITDDATNLSKGMNLRYLGLDVGQIDSIQLDAKAKR 677
>gi|118474229|ref|YP_892205.1| methyl-accepting chemotaxis protein [Campylobacter fetus subsp.
fetus 82-40]
gi|118413455|gb|ABK81875.1| methyl-accepting chemotaxis protein [Campylobacter fetus subsp.
fetus 82-40]
Length = 731
Score = 43.4 bits (99), Expect = 0.067, Method: Composition-based stats.
Identities = 36/388 (9%), Positives = 104/388 (26%), Gaps = 8/388 (2%)
Query: 52 LSTDSSVRFNG--IPVGRIVGLFLDQEYPNHSLAKALI-RPDTPLYPSTTATIRTQGLAG 108
L + NG + VG + + I D+ A +
Sbjct: 197 LIEGNP---NGNRVFVGNVEKISFGSNSFIGINVALPIFNNDSKKPIGVIAF--SLNFKE 251
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
I+ L + ++ + + I I + +K ++D+ +
Sbjct: 252 ISNFLLDNKLDSFSGYTKAIIAKDGTIAVHDNSNIILKKIQDINPHAKALADAVAKNEFK 311
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
I + T + A + S+ + + + + L
Sbjct: 312 IFSNYTTSTGVSSYAVVAPFTTARDSSNWAIVTKAPIDSVFAPLYSLQKTIFVASLIFLV 371
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ I + + + N + + +V+ + + ++++
Sbjct: 372 VSLAFIYFYIKANLAMRLPILLNALDSFFKFINHESKEVQMIKIHANDELGAMGNMINAN 431
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+K + + + + I + L K
Sbjct: 432 IAKTRDSLIKDQEAVQQSVETAKEIEGGNLTARIVKDPANPQLIELKNVLNKMLLVLQNK 491
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
M++IN + ++ + A T+ + I + + +F++
Sbjct: 492 VGSNMNEINRVFNSYKSLDFTTNIANAKGEVEVTTNVLGDEIKEMLRSSLSFAKDLAEQS 551
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L +Q+ + ++ E++ +
Sbjct: 552 KELRESMQKLTDGSRTQAHSLEQSAAAV 579
>gi|148252546|ref|YP_001237131.1| methyl-accepting chemotaxis sensory transducer [Bradyrhizobium sp.
BTAi1]
gi|146404719|gb|ABQ33225.1| methyl-accepting chemotaxis sensory transducer [Bradyrhizobium sp.
BTAi1]
Length = 562
Score = 43.4 bits (99), Expect = 0.070, Method: Composition-based stats.
Identities = 26/243 (10%), Positives = 73/243 (30%), Gaps = 18/243 (7%)
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ Q N+Q ++ + S V V+E+ + E +
Sbjct: 318 TSTAERTQQRTTTVAAASEQATANVQSVASATEELSSSVTEISRQVQESARMANEAVDQA 377
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSN-----MRSSISAIREITDQRQKIISTINTIE 336
S K+ + + ++ + ++ + + + ++
Sbjct: 378 RKTNDRVSELSKAAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVK 437
Query: 337 NITSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ ++ + + ++ I ++ A+KE + + T E+
Sbjct: 438 ALAEQTARATGEIGQQIAGIQSATQESVGAIKEISGTIERLSEISSTIAAAVEEQGAATQ 497
Query: 392 SIGNNLQNFSQ------SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GREKG 443
I N+Q +Q S + D+Q + + + ++ + GR
Sbjct: 498 EISRNIQQAAQGTHEVSSNITDVQRGASETGSASSQVLSAAQSLSQDSNRLKLEVGRFLN 557
Query: 444 SVK 446
+V+
Sbjct: 558 TVR 560
>gi|85092774|ref|XP_959539.1| hypothetical protein NCU02411 [Neurospora crassa OR74A]
gi|28920978|gb|EAA30303.1| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1491
Score = 43.4 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 32/289 (11%), Positives = 84/289 (29%), Gaps = 6/289 (2%)
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ +++ + + Q ++E++ K + I +
Sbjct: 644 HKREEALLSRQIQELQQNLQSRQAMLEDLRKEMRQVQDQHRQTQLDYQAQTDKIAALEDE 703
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+V + D ++ + M L + S N ++ +
Sbjct: 704 VEVLQAALDEESERAGQDLEKLQEECMDLKQKLASAQATSSAARASMNTSNSNAPTYNES 763
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
+R E +I + + + A I S +
Sbjct: 764 QASLRIQLADANENLARIMKEQKMLQERYNNLDAEARSLRINLSHATAERDELEAELQQH 823
Query: 324 QRQKIISTINTIENITSNLNDSSQKFAELMSKI--NNISALKENNSLFKDAQRAMHTFRD 381
+ Q ++ NL + + + ++ N S L+ S+ K + +
Sbjct: 824 RDQGPDQDTFQLDQEKLNLRSAKTRLDNEIRRLREENRSLLERQRSMQKSLEEEIEKASA 883
Query: 382 TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
E++N+ I + +++ S S ++ + T+ + + FE
Sbjct: 884 EEERLNQEILQLQAKVRDSSSSAPGELVTA----RRTIRELERRIAEFE 928
>gi|291437185|ref|ZP_06576575.1| large Ala/Glu-rich protein [Streptomyces ghanaensis ATCC 14672]
gi|291340080|gb|EFE67036.1| large Ala/Glu-rich protein [Streptomyces ghanaensis ATCC 14672]
Length = 1303
Score = 43.4 bits (99), Expect = 0.072, Method: Composition-based stats.
Identities = 24/300 (8%), Positives = 93/300 (31%), Gaps = 6/300 (2%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++++ +++ E + + + + S
Sbjct: 152 QTVESHVNENVAWAEQLRARTEAQARRLLEESRAEAEQAMAAARAEAERLTAEARQRLQS 211
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
++++ L+ + + Q E + ++ + + +E +
Sbjct: 212 EAESARAEAEQLLRRARADAERLLNAASAQAQEATDHAEQLRTSTAGETQAARREAQELS 271
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ ++ + + L + + ++++ A + A S + R T + Q
Sbjct: 272 RAAEQRMAEAETALREART--EAEKVLAEAKEAAAKALASAESANETRTRTAKEQVARLV 329
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ +++ Q A+ ++ I A + A+ + ++ +
Sbjct: 330 QEATKEAEQTKSEAEQLVADARAEAEKIVAEAAEKARTITAEESATQLSKAAKTAEDVLN 389
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + +++ + + + R+ + + ++ + + G K K Y+ K
Sbjct: 390 KASEDAKKTTRAAAEEAERIRREAEAEADRLRAEAHDI----AEQLKGAAKDDTKEYRAK 445
>gi|149191345|ref|ZP_01869598.1| Paraquat-inducible protein B [Vibrio shilonii AK1]
gi|148834824|gb|EDL51808.1| Paraquat-inducible protein B [Vibrio shilonii AK1]
Length = 878
Score = 43.4 bits (99), Expect = 0.073, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 19/48 (39%), Gaps = 3/48 (6%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + GL SSV + GIPVG + + L + I +
Sbjct: 403 LSENSFGLEPGSSVLYRGIPVGTLNSVELVDD---QVAMDISIDIEYK 447
Score = 41.1 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 39/120 (32%), Gaps = 5/120 (4%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + L+++ G ++ GL +++R+ G+ VG + + L
Sbjct: 26 ILPVLTIALAGWLLAKAVHDAGQRVQI---YFSDAQGLIAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
++ + A L T + + L L ATE +
Sbjct: 83 SEDLSNIYVDADIYPEATKLLGEDTKFWLVKPSASLSGISGLDALVSGNYISIFPATESD 142
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 9/92 (9%), Positives = 28/92 (30%), Gaps = 3/92 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
+ + + + I VGR+ + L + + ++ I P + ++ + I
Sbjct: 760 IKPGTPILYRDIEVGRVTDVEL-GTFADRVISTIQIDPHYAYLVRSNSVFWNVSGLDVQI 818
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATP 141
+ ++ + + P
Sbjct: 819 GLSGANIKAGTVDSLIRGGITFSTPEGKQLQP 850
>gi|330721778|gb|EGG99764.1| Methyl-accepting chemotaxis protein I (serine chemoreceptor
protein) [gamma proteobacterium IMCC2047]
Length = 732
Score = 43.4 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 36/397 (9%), Positives = 114/397 (28%), Gaps = 19/397 (4%)
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L ++ + + + L A + + ++ + I +
Sbjct: 295 KLLEKRVSAISTEMYVNMTVVLICGLIALVLAFMVYRSITGPINQAVQTFTRIQHGDLDS 354
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
+ + + + + + + I + + ++ + K T +
Sbjct: 355 DIDVQGRDETAQLLKSLKSMQESLGAIDEVAAMLKAMAAGDMKTRINTHYEGKFEVLKDD 414
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ--VS 249
N + + +S K N I++ +L + + +
Sbjct: 415 VNKLAETFVGVVGNIQETTSAVKVAANEISEGNKNLSSRTENQAASLEQTAASMEEITST 474
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+++ Q R+T + +V + ++ + + + +
Sbjct: 475 IKQNTENARQADQLSAVARDTAEEGGKVVSRAIEAMNTINESSTKIADIISVIDEIAFQT 534
Query: 310 NMRSSISAIREIT--DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
N+ + +++ +Q + + N+ ++++ EL+ +++ ++E +
Sbjct: 535 NLLALNASVEAARAGEQGRGFAVVAGEVRNLAGRSATAAKEIKELIE--DSVGKVEEGSE 592
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS-------------QSGLNDIQNLVRK 414
L + + + K++ + I + S LV +
Sbjct: 593 LVNHSGETLKEIVASVTKVSDIVSEITAASEEQSLGIEEMNRAITQIDEVTQQNTALVEE 652
Query: 415 LQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ D + ER G GS + P+
Sbjct: 653 VAAASEATGDQAADLERQMMFFDVGSSAGSARTVTPR 689
>gi|260772858|ref|ZP_05881774.1| paraquat-inducible protein B [Vibrio metschnikovii CIP 69.14]
gi|260611997|gb|EEX37200.1| paraquat-inducible protein B [Vibrio metschnikovii CIP 69.14]
Length = 874
Score = 43.4 bits (99), Expect = 0.075, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + ++ G ++ GL + +R+ G+ VG + + L
Sbjct: 21 ILPILTLLLAGWLVGKAIHDAGERIQIH---FSDAQGLVAGRTPIRYQGLEVGMVREIKL 77
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
E + A L +T +
Sbjct: 78 APELNSIYVEADIYPEATQLLSDTTRFWL 106
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G + GS++ + V + I VGR++ + L ++ I PD
Sbjct: 742 SGVRFTLQTEYRGSIN---VGTPVFYRDIEVGRVIDIQLGALADR-VISTIDIDPDY 794
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 9/90 (10%), Positives = 27/90 (30%), Gaps = 1/90 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQG 105
+ G+S S + + IP+G + L ++ + L + + +
Sbjct: 167 NDLGGISIGSPIVYKKIPIGEVFSYQLAKDAQSIVLQVSIESEYRHLITKESRFWNVSGI 226
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ + + + + A +
Sbjct: 227 GTSLGFDGIDVRLESLSALIGGAIAVDSPD 256
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 36 GPMAEVIIRIPGSVDGLST-DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G + I +P G++ S + + G+ +G+I L L+++ +A A I+P
Sbjct: 277 GRGIPITITLPDD-SGINASGSPIMYRGLEIGQITHLQLNEDNT-QIIAHAAIQPSL 331
>gi|42522694|ref|NP_968074.1| hypothetical protein Bd1152 [Bdellovibrio bacteriovorus HD100]
gi|39573890|emb|CAE79067.1| pqiB [Bdellovibrio bacteriovorus HD100]
Length = 283
Score = 43.4 bits (99), Expect = 0.076, Method: Composition-based stats.
Identities = 7/66 (10%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN-HSLAKALIRPDTPLY 94
+ + + ++ +V F G+ VG + + L + + + + +
Sbjct: 153 EDTVTYRLE-TNNAESINPGDNVSFRGMNVGTVTKVSLSKTAQSLYVQINLQSKYARLVR 211
Query: 95 PSTTAT 100
+T
Sbjct: 212 TNTQFW 217
>gi|220935657|ref|YP_002514556.1| methyl-accepting chemotaxis sensory transducer [Thioalkalivibrio
sp. HL-EbGR7]
gi|219996967|gb|ACL73569.1| methyl-accepting chemotaxis sensory transducer [Thioalkalivibrio
sp. HL-EbGR7]
Length = 572
Score = 43.4 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 44/466 (9%), Positives = 119/466 (25%), Gaps = 37/466 (7%)
Query: 3 SKNYYTSVGLFV-VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSV------------ 49
++ T +G + +L I L ++ Q + + +
Sbjct: 14 TRARLTLLGFSTCILVLIVGLLGIRGLGQAEQGMQDTYDYRLVPLTELADMMFMAMNSRI 73
Query: 50 ---DGLSTDSSVRFNGI--PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
+ + S GI VGR+ + D E ++ T A+ T
Sbjct: 74 QLMNAIRDGSP---EGIDRRVGRVEDMARDMEASFQAI------------RPTLASGGTD 118
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
+ + +A R +R G + + +
Sbjct: 119 PERLAQFETHLQQYTRDGLLDTVAELRARRVTEANQRMGNELYKAFGLLRDDIRYVTRNQ 178
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ + ++ + + L I + +S + +
Sbjct: 179 RELAETDFQRMVENSAWVRNATLVALILAILLSLGLTLVITRRITASVADLRQASHRLAE 238
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
L + ++ + + +VI + + Q + Q+
Sbjct: 239 GDLSARADDRGHDEFGAAAKDFNAMVDGVREIVSRVITATDALLQNAQRVGSICQQTRQA 298
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+S ++ T+ RS+ A + + + +
Sbjct: 299 VSQQEAETAQVATAMNEMTAT-VQDVARSAAQAAEATRQASGHADNGRKVVNGTVTTIGS 357
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + + I+ + A + D R + + +
Sbjct: 358 LADEVRRVSQAIDQLGADSQQIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVV 417
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFE---RNPQDIVWGREKGSVKI 447
++++ L + Q++ + + + RN + G K + +
Sbjct: 418 ADEVRTLASRTQDSTREIQEMIERLQQGARNAAQAMEGGLKRTDES 463
>gi|47211645|emb|CAF92169.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2310
Score = 43.4 bits (99), Expect = 0.079, Method: Composition-based stats.
Identities = 18/208 (8%), Positives = 68/208 (32%), Gaps = 7/208 (3%)
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
K + + + + + L+ + + K+ ++ D ++ FQ +++ +
Sbjct: 1276 KNKQEMMMVDLEERLKKEEKTRQELEKAKRKLDGETSDFQDQIAEFQTQMEELKGQIGK- 1334
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + + + ++ ++++ ++ + S D S++
Sbjct: 1335 KEEEQQLMQARNEDEATQKNNALKQLRELQAQLSELQEDLESEKLARNKAEKLKRDLSEE 1394
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
L +++ + + + + + I+ + + +Q Q
Sbjct: 1395 LEALKTELEDTLDTTAAQQELRTKRE--QEVAELKKTIDEETKNHESQIQEMRQRH---- 1448
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +L E + N E+ Q +
Sbjct: 1449 ATALEELSEQLEQAKRFKGNLEKTKQSL 1476
>gi|239928860|ref|ZP_04685813.1| large Ala/Glu-rich protein [Streptomyces ghanaensis ATCC 14672]
Length = 1293
Score = 43.4 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 24/300 (8%), Positives = 93/300 (31%), Gaps = 6/300 (2%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++++ +++ E + + + + S
Sbjct: 142 QTVESHVNENVAWAEQLRARTEAQARRLLEESRAEAEQAMAAARAEAERLTAEARQRLQS 201
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
++++ L+ + + Q E + ++ + + +E +
Sbjct: 202 EAESARAEAEQLLRRARADAERLLNAASAQAQEATDHAEQLRTSTAGETQAARREAQELS 261
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ ++ + + L + + ++++ A + A S + R T + Q
Sbjct: 262 RAAEQRMAEAETALREART--EAEKVLAEAKEAAAKALASAESANETRTRTAKEQVARLV 319
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ +++ Q A+ ++ I A + A+ + ++ +
Sbjct: 320 QEATKEAEQTKSEAEQLVADARAEAEKIVAEAAEKARTITAEESATQLSKAAKTAEDVLN 379
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + +++ + + + R+ + + ++ + + G K K Y+ K
Sbjct: 380 KASEDAKKTTRAAAEEAERIRREAEAEADRLRAEAHDI----AEQLKGAAKDDTKEYRAK 435
>gi|150399841|ref|YP_001323608.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
vannielii SB]
gi|150012544|gb|ABR54996.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
vannielii SB]
Length = 730
Score = 43.4 bits (99), Expect = 0.080, Method: Composition-based stats.
Identities = 35/391 (8%), Positives = 121/391 (30%), Gaps = 15/391 (3%)
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V +G +G IV + + N D A+I + T +
Sbjct: 173 PVYSDGKYIGSIVAVEILNNNYNIV-------DDVKRLTGDDASITFEDKRIST--TIIR 223
Query: 117 LRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPL 176
+ ++ +Q + I DS++ +I
Sbjct: 224 DGRRTVSLAVSNGIWSQVYSNQPYFGTTDVLGVQYLTAYYPIYDSNKKPVGMIVVGSPQT 283
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+A E + ++ + + + +T D+
Sbjct: 284 NAILAKNEARNRMILVALIGTILAVLISLITSKKITKPVEELKHATEEFGKGNYEYKSDI 343
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ +++ ++ + + D E + EV ++++ + ++
Sbjct: 344 KTGDELEVLSNSFNSMAENVKNLMKTMDMDKAELAKLLSEVTTVMNNVSKGDFTARANEN 403
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ + + + I+++ ++ + + +E +S ++S + A+ +++
Sbjct: 404 SKNNELQV-AINKAVSNVAVLIKDLREEVTLLNKQVVKLEEQSSGAEETSSQVADAANQV 462
Query: 357 NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
+A + ++ +D + + ++ + S++ N ++ + ++
Sbjct: 463 --ATAASDQSAKVQDISDMIEEVYEGTKNSYKNAEETVKATSEISENSENGVKKVENAIK 520
Query: 417 ETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + +++ R+ Q + G + +
Sbjct: 521 R-MQTITNVIDDLGRSIQML--GEDGKKINE 548
>gi|296272784|ref|YP_003655415.1| mammalian cell entry related domain-containing protein [Arcobacter
nitrofigilis DSM 7299]
gi|296096958|gb|ADG92908.1| Mammalian cell entry related domain protein [Arcobacter
nitrofigilis DSM 7299]
Length = 880
Score = 43.4 bits (99), Expect = 0.081, Method: Composition-based stats.
Identities = 10/78 (12%), Positives = 27/78 (34%), Gaps = 1/78 (1%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
Y + S+ + + V+G+ S + + G+ +G++ + L + +
Sbjct: 625 YKIYSSSDAMKNFTNTLSILFDDVEGVRPQFSKLNYKGVDIGKVSNIILTPQNKVLVKVQ 684
Query: 85 ALIRPDTPLYPSTTATIR 102
D T ++
Sbjct: 685 VFKNYDRFSKEGTIFYLK 702
Score = 41.1 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 9/78 (11%), Positives = 26/78 (33%), Gaps = 9/78 (11%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ +L + Y Y + + + + L + + + G+ +G++ + +
Sbjct: 29 LVVLMILGWIAY-----ESYTKKGTNISVIFK-NAEDLKEGVTPLEYKGLVLGKVTKIEI 82
Query: 74 DQEYPNHSLAKALIRPDT 91
N L+ D
Sbjct: 83 --NDLNSVKVNILVNSDV 98
>gi|253741816|gb|EES98677.1| Coiled-coil protein [Giardia intestinalis ATCC 50581]
Length = 1831
Score = 43.4 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 32/342 (9%), Positives = 89/342 (26%), Gaps = 12/342 (3%)
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERN-QRAMITATPSGINYFISNAENTSKKIS 159
+ +Q ++ E + + A + + I A+
Sbjct: 1173 LYSQRPVSLSEPECQFILGCTANGWVTAFDWPFRIPKAIYRRRLHGSDIIAAKLVRGSTL 1232
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + II +I + + + + + + +
Sbjct: 1233 FTLSSDELIISHIRFFIPASSIFSGADKSQHFRMLKSVFQAEDSLDSLLLKLPITQYLPV 1292
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR-ETTQTFQEVG 278
+ S + K +L N + + + D + T V
Sbjct: 1293 MPFDHCSRTVAYGSNLDSKFFNMLINTADIWVSMDYRAALIKEATRDKAGKITAKISHVK 1352
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
I + + + + T + + + + ++I I +E +
Sbjct: 1353 TTIAAAIQQLDQQNSGGDQENSKMEVEFDTDHENALVETQARYQTRIEQIRKDIADLEQM 1412
Query: 339 TSNLNDSSQKF-AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
N + + + L + +I +E + + ++ ++ + I
Sbjct: 1413 LKNETERYESSRSSLQKRFEDIIKYEETMRI-----ATVANLNAQIDQQDQALSKIEAE- 1466
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L I + R+ + V + E+N + G
Sbjct: 1467 ---CNEELRQINDERREALKAVEQIGETAVEREKNASATLRG 1505
>gi|190194418|ref|NP_076331.2| desmoplakin [Mus musculus]
Length = 2883
Score = 43.4 bits (99), Expect = 0.084, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 120/370 (32%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + + ++ + IN
Sbjct: 1324 SLEEAAKTIQDKNKEIERLKAEYQEEAKRRWEYENELSKVRNSYDEEIISLKNQFETEIN 1383
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + ++ + LA ++ ++ Q
Sbjct: 1384 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLCEEVKRLKNTLAQTTENLRRVEENAQ 1443
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ V
Sbjct: 1444 QQKATGSEMSQRKQQLEIELRQVTQMRTEESMRYKQSLDDAAKTIQDKNKEIERLKQLVD 1503
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ K+ + D S + + + + ++ +R
Sbjct: 1504 KETNERKCLEDENSKLQRVQYDLQKANNSA--TEAMSKLKVQEQELTRLRIDYERVSQER 1561
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS--LFKDAQRAMHTFRDTS 383
I I++ +L QK E +S++ ++ + + L ++ + + ++ +
Sbjct: 1562 TVKDQDITRIQSSLKDLQLQKQKAEEELSRLKRTASDESSKRKMLEEELEAMRRSLKEQA 1621
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + VR+ Q T + E + +V
Sbjct: 1622 VKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHVREKQRTQEELRRLSLDVEALRRQLV 1681
Query: 438 WGREKGSVKI 447
E+ +VK
Sbjct: 1682 Q--EQENVKQ 1689
>gi|148708988|gb|EDL40934.1| mCG20427 [Mus musculus]
Length = 2767
Score = 43.4 bits (99), Expect = 0.087, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 120/370 (32%), Gaps = 12/370 (3%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + + ++ + IN
Sbjct: 1208 SLEEAAKTIQDKNKEIERLKAEYQEEAKRRWEYENELSKVRNSYDEEIISLKNQFETEIN 1267
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+N+ + + ++ + LA ++ ++ Q
Sbjct: 1268 ITKTTIHQLTMQKEEDTSGYRAQIDNLTRENRSLCEEVKRLKNTLAQTTENLRRVEENAQ 1327
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + + K +++ V
Sbjct: 1328 QQKATGSEMSQRKQQLEIELRQVTQMRTEESMRYKQSLDDAAKTIQDKNKEIERLKQLVD 1387
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ K+ + D S + + + + ++ +R
Sbjct: 1388 KETNERKCLEDENSKLQRVQYDLQKANNSA--TEAMSKLKVQEQELTRLRIDYERVSQER 1445
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS--LFKDAQRAMHTFRDTS 383
I I++ +L QK E +S++ ++ + + L ++ + + ++ +
Sbjct: 1446 TVKDQDITRIQSSLKDLQLQKQKAEEELSRLKRTASDESSKRKMLEEELEAMRRSLKEQA 1505
Query: 384 EKINRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
KI + ++ S+ L + VR+ Q T + E + +V
Sbjct: 1506 VKITNLTQQLEQASIVKKRSEDDLRQQRDVLDGHVREKQRTQEELRRLSLDVEALRRQLV 1565
Query: 438 WGREKGSVKI 447
E+ +VK
Sbjct: 1566 Q--EQENVKQ 1573
>gi|1175704|sp|P46315|YCF22_ANTSP RecName: Full=Uncharacterized protein ycf22
gi|493472|emb|CAA83939.1| unknown [Antithamnion sp.]
Length = 198
Score = 43.0 bits (98), Expect = 0.087, Method: Composition-based stats.
Identities = 20/197 (10%), Positives = 47/197 (23%), Gaps = 8/197 (4%)
Query: 25 IYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
I W + + G+ +SV G+ +G I L ++ L
Sbjct: 9 IIWF-IVKYKKKHGYSLFVEFTH-AYGIGEGTSVNMRGVNIGYIKNLQINSNS---VLVS 63
Query: 85 ALIRPD-TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
I+ + + ++ L T I++ L K + I
Sbjct: 64 IYIKSEKILIPKNSIIETNQTSLFNNTIIDIIPLEKINN--YSIRDFNVFNQNCYDLQIF 121
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
N + + + + ++++ + +
Sbjct: 122 CNNQYIIGDRGLNYDDLIRATTRIAQRFDDPRFFNLFYLFLQNTIEISDDFILTFNNISS 181
Query: 204 TQVTPHSSDSKNTFNTI 220
+ N I
Sbjct: 182 MSYYLYIFCRDFLLNNI 198
>gi|313904519|ref|ZP_07837895.1| membrane protein-like protein [Eubacterium cellulosolvens 6]
gi|313470661|gb|EFR65987.1| membrane protein-like protein [Eubacterium cellulosolvens 6]
Length = 1082
Score = 43.0 bits (98), Expect = 0.088, Method: Composition-based stats.
Identities = 34/442 (7%), Positives = 115/442 (26%), Gaps = 25/442 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ + + + + + + V + G D ++
Sbjct: 9 MKKRVNKSLAVAMAAMVGMTPAATAPVFAGTQTSKDETVYVNAKANGDADNITVSD--HL 66
Query: 61 NGIPVGRIVGL----FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG------LAGIT 110
+G+ G+ + L + K + T + ST I QG G+
Sbjct: 67 SGLTSGK--KIKDNSDLAEIENVKGDEKFTGKGTTLKWESTGEDIYYQGKSDKQLPVGVK 124
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ ++ + + + + + N + T + + +
Sbjct: 125 FTYYLDGKEISPEALAGKSGKLKIHIQYTNNTEKNVKVGKKTETLQSPFVMMTGVILPED 184
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
++ + + T + +
Sbjct: 185 VFSNVNVDNGRIVDDGARTIVLGFGMPGLKESLNLTDMKEKAKDAAGKTTGETAAKAESK 244
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
I +I++ +I +++ + + + ++ + ++ KI L
Sbjct: 245 IDSINIPDSVEISADVKDFHMDPTFTVALTDVFNNVEFDSIASTDDLNDKIKELEDA--- 301
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
T ++ + S+ ++ D +++ I + D +
Sbjct: 302 ------TVQLVDGSRQLADGASTLDSSYGQMDDGIRQLSDGIRKAASGIDQYTDGVSQVN 355
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
+ ++N ++ + NS ++ +E +N + + + + +
Sbjct: 356 NGVLQLNQGASQLDCNSSA--LKQGASQLASGAETLNNGVQQLAGGITQKGTGLADGVNA 413
Query: 411 LVRKLQETVNHFDDCLNNFERN 432
+ + + +
Sbjct: 414 YTDGVSKLNAGIQQMKTQVQGD 435
>gi|256269118|gb|EEU04453.1| Smc6p [Saccharomyces cerevisiae JAY291]
Length = 1114
Score = 43.0 bits (98), Expect = 0.089, Method: Composition-based stats.
Identities = 39/389 (10%), Positives = 109/389 (28%), Gaps = 31/389 (7%)
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ------RAMITATPSGINY 146
+ + T L Y + I + +R+ R+ S
Sbjct: 143 IREGCYSAKITLHLDNSKYGAYQQGIFGNEIIVERIIKRDGPASFSLRSENGKEISNKKK 202
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
I + + +T + + + +++ + +
Sbjct: 203 DIQTVVDYFSVPVSNPMCFLSQDAARSFLTASTSQDKYSHFMKGTLLQEITENLLYASAI 262
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ ++ + + + K + + N + V +
Sbjct: 263 HDSAQENMALHLENLKSLKAEYEDAKKLLRELNQTSDLNERKMLLQAKSLWIDVAHNTDA 322
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ + QK+D + ++ + E ++ + + ++ Q
Sbjct: 323 CKNLENEISGIQQKVDEVTEKIRNRQEKIERYTSGGTTIEAQIDAKVIYVNEKDSEHQNA 382
Query: 327 K--IISTINTIENITSNLNDSSQKFAELMSKINNISAL---------KENNSLFKDAQRA 375
+ + + E SN ++ + K++ ++ KE ++
Sbjct: 383 RELLRDVKSRFEKEKSNQAEAQSNIDQGRKKVDALNKTIAHLEEELTKEMGGDKDQMRQE 442
Query: 376 MHTFRDTSEKINRY----------IPSIGNNLQNFSQSGLNDIQNLVR----KLQETVNH 421
+ +EK+ + + ++Q+ +S L I ++ +LQ
Sbjct: 443 LEQLEKANEKLREVNNSLVVSLQDVKNEERDIQHERESVLRTISRSIQNKKVELQNIAKG 502
Query: 422 FDDCLNNFERNPQDIVWGREKGSVKIYKP 450
D L NF+RN ++ E+ + P
Sbjct: 503 NDTFLMNFDRNMDRLLRTIEQRKNEFETP 531
>gi|27462192|gb|AAO15369.1|AF330229_3 membrane protein [Actinobacillus pleuropneumoniae]
Length = 128
Score = 43.0 bits (98), Expect = 0.090, Method: Composition-based stats.
Identities = 11/81 (13%), Positives = 29/81 (35%), Gaps = 5/81 (6%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV-RFNGIPVGRIVGL 71
F + + + IR DG++ +V R+ G+ +G++ +
Sbjct: 22 FWLLPIVAFVIGGLLF--FQILKEQGEMITIRFNE-GDGITAGKTVIRYQGLQIGQVKKV 78
Query: 72 FLDQEYPNHSLAKALIRPDTP 92
+ ++ +A + P+
Sbjct: 79 YFVED-LKKVEVQAEVNPEAK 98
>gi|145487161|ref|XP_001429586.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396679|emb|CAK62188.1| unnamed protein product [Paramecium tetraurelia]
Length = 938
Score = 43.0 bits (98), Expect = 0.092, Method: Composition-based stats.
Identities = 30/314 (9%), Positives = 102/314 (32%), Gaps = 15/314 (4%)
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ Q A + ++ + + PS I + + + ++ + + N
Sbjct: 188 KLRQKADKFDEISKQFSNPSDIQKELDQLKKKAAELDKMKSQLNNQNP------DQLLKN 241
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
++ L + I + + S++ + +Q++++
Sbjct: 242 LDENKKQLQSKDREIGDLKRLLSELQQNQGSQDDQIRFLQQKIDELEEKVVGLVQELSRY 301
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
++ + K + + + Q + D
Sbjct: 302 KMLLKSKEDELNKLQMLFRDNETRLAQMNNELQRSKNDLQRAQGDLQKAQGDL--RKAQT 359
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+++ S ++ ++ Q Q++ N ++ N + + E+ ++N++
Sbjct: 360 DLSKSQQENQNLKQQTDDLKRQNQELAQENNNLQQDLENQTQNLGQLDEIKDQLNDL--Q 417
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
+E N L + ++ ++ + + L+ + D++ + ++ ++
Sbjct: 418 EEKNQLNDKVSDLQNDLKEKQRLFDQKQKELEDALKR-----VKDLEAKLLEMDHYIDTL 472
Query: 423 DDCLNNFERNPQDI 436
+D L FE++ Q +
Sbjct: 473 EDDLQKFEKDNQQL 486
>gi|260778561|ref|ZP_05887453.1| paraquat-inducible protein B [Vibrio coralliilyticus ATCC BAA-450]
gi|260604725|gb|EEX31020.1| paraquat-inducible protein B [Vibrio coralliilyticus ATCC BAA-450]
Length = 877
Score = 43.0 bits (98), Expect = 0.094, Method: Composition-based stats.
Identities = 18/104 (17%), Positives = 34/104 (32%), Gaps = 7/104 (6%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAK------ALIRPDTPLYPSTTA 99
+ GL ++V + GI VG + + L E N L + + S TA
Sbjct: 405 DNSFGLGAGANVLYRGITVGEVTKVSLKGEKVNLDVLVDKTYAELIKSQNRFFVTGSATA 464
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
+ GL L + + + ++ + + S
Sbjct: 465 ELTESGLNINVPPAQQLLTGSISFVSEGSDNPREQYTLYPSKSL 508
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 13/85 (15%), Positives = 27/85 (31%), Gaps = 4/85 (4%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE- 76
+ WL + + I GL +++R+ G+ VG + + L ++
Sbjct: 29 VLTMVLAGWL-VIKAINDAGQRIQIYFSD-AQGLVAGRTTIRYQGLEVGMVRDINLAEDL 86
Query: 77 YPNHSLAKALIRPDTPLYPSTTATI 101
+ A L T +
Sbjct: 87 ESIYVEADIYPEAAKLLSKETRFWM 111
Score = 38.4 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 10/69 (14%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+ +Y ++ + G + + ++ ++V++NG+ VG + + D +
Sbjct: 624 WLLYQDFKTARKFGHVITLNAEGENNIT---KGTAVKYNGVQVGEVTLVIPDFKRER-VE 679
Query: 83 AKALIRPDT 91
K + P+
Sbjct: 680 IKLRVLPEY 688
>gi|183980215|ref|YP_001848506.1| MCE family lipoprotein Mce6E [Mycobacterium marinum M]
gi|183173541|gb|ACC38651.1| MCE-family lipoprotein Mce6E [Mycobacterium marinum M]
Length = 375
Score = 43.0 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + L+ + V+ G +G + + +++ IR D
Sbjct: 39 GLGSGGYRITAIF-ANALNLNEHAKVKLGGADIGLVESMT---ARDFNAVTTLRIRSDVR 94
Query: 93 LYPSTTATIRTQGLAGITY 111
+ + A +RT G +
Sbjct: 95 VPVGSGAELRTATPLGDVF 113
>gi|118619941|ref|YP_908273.1| MCE family lipoprotein Mce6E [Mycobacterium ulcerans Agy99]
gi|118572051|gb|ABL06802.1| MCE-family lipoprotein Mce6E [Mycobacterium ulcerans Agy99]
Length = 375
Score = 43.0 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 11/79 (13%), Positives = 26/79 (32%), Gaps = 4/79 (5%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ + L+ + V+ G +G + + +++ IR D
Sbjct: 39 GLGSGGYRITAIF-ANALNLNEHAKVKLGGADIGLVESMT---ARDFNAVTTLRIRSDVR 94
Query: 93 LYPSTTATIRTQGLAGITY 111
+ + A +RT G +
Sbjct: 95 VPVGSGAELRTATPLGDVF 113
>gi|119946323|ref|YP_944003.1| endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
gi|119864927|gb|ABM04404.1| Endonuclease/exonuclease/phosphatase [Psychromonas ingrahamii 37]
Length = 1010
Score = 43.0 bits (98), Expect = 0.097, Method: Composition-based stats.
Identities = 38/387 (9%), Positives = 92/387 (23%), Gaps = 26/387 (6%)
Query: 13 FVVSILFFSF---------FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
F+V+ + + +++ N + P+ I + G++ GL+ V
Sbjct: 213 FIVAGVVTAIQTEKLGNDLGVGFFIQDGNGDNDPLTSDGIFVIGNISGLTVGDKVAVT-- 270
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
G++ E I S +T+ L + E E+
Sbjct: 271 --GKVK------EDYGW----TKIDSTLVEGLSRGSTLAATALRILPTDENFDFTLERHE 318
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+A ++ +T + S N + +
Sbjct: 319 GMFVAFDKQSDMHVTRSFSFDYGPYR---NNLMVANKRVNQHPNQSNAPAVHQGELDSAA 375
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
E + + I+ + + I + I
Sbjct: 376 EKQTDDNQDRRVVIESFIKAGDGIIPWYPDFAKEGAAQKGSSDDYIRIGDVIDGLEGVIS 435
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ + + + + G + + +
Sbjct: 436 YSYNDYRFYVTNQATKETFLHQASDRSKAPVMQDGDLTIATFNVLNYFNSQLGGEPNPLD 495
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ +I I + I + I +N S +L++++N
Sbjct: 496 QNRGAESAEEFDRQASKIVTAIVAINADILGLMEIENNGFGESSAIIDLLNRLNANLDDT 555
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYI 390
S+ + + S+ I I
Sbjct: 556 NQYSIAQPQTEDLTNGFVGSDAITSQI 582
>gi|116062145|dbj|BAF34703.1| fast skeletal myosin heavy chain isoform mMYH-3 [Oryzias latipes]
Length = 1935
Score = 43.0 bits (98), Expect = 0.099, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 89/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1307 QAFTQQIEELKRHVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1366
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1367 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1426
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1427 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1485
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A +
Sbjct: 1486 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKSVETEKS 1539
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ L +RN Q ++
Sbjct: 1540 EIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEELEQIKRNSQRVI 1595
>gi|209695044|ref|YP_002262973.1| hypothetical protein VSAL_I1539 [Aliivibrio salmonicida LFI1238]
gi|208008996|emb|CAQ79224.1| putative membrane protein [Aliivibrio salmonicida LFI1238]
Length = 880
Score = 43.0 bits (98), Expect = 0.100, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 32/89 (35%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + +Y + + + I GL+ +++R+ G+ VG + + L
Sbjct: 30 LLALCLGGWLVY-----SAFVEAGQRIQIYF-DDAQGLTAGRTTIRYQGLEVGMVKNITL 83
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L +T +
Sbjct: 84 SKDLSNIYVDADIYPEASELLKDNTQFWL 112
Score = 37.2 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 15/125 (12%), Positives = 35/125 (28%), Gaps = 6/125 (4%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYP 95
+ GSV + + F I VG +V + L + + + ++P+ +
Sbjct: 749 SYTLESSTRGSV---KVGTPLLFREIEVGEVVDVRL-GDLSDRIIITIGVQPNYAYLIRE 804
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
++ + I +I + + + P TS
Sbjct: 805 NSVFWNVSGVNMSIGISGAKVRAGTVDSILRGGIAFSTPDDESLAPQAKENKSYLLYKTS 864
Query: 156 KKISD 160
+
Sbjct: 865 EDDWP 869
>gi|301755687|ref|XP_002913688.1| PREDICTED: laminin subunit beta-1-like [Ailuropoda melanoleuca]
Length = 1786
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 72/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + L ++ S ++ + + + +K+D D
Sbjct: 1442 QKAMDFDRDILSALAEVEQLSKMVSEAKLRADEAKLNAQNVLLKTNATKEKVDKSNEDLR 1501
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T ++ + +++ +E I
Sbjct: 1502 NLIKQIRNFLTQDSADLDSIEAVADEVLKMGMPSTPQQLQNLTQDIRERVESLSQVELIL 1561
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1562 QQSAADVARAEMLLEEAKRASKNATDVKVTADMVKEALEEAEKAQIAAEKAIKLAVEDIQ 1621
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1622 G-TQNLLTSIESEATASEETLLNASQRISELERNMEEL 1658
>gi|281349144|gb|EFB24728.1| hypothetical protein PANDA_001514 [Ailuropoda melanoleuca]
Length = 1791
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 25/218 (11%), Positives = 72/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ + L ++ S ++ + + + +K+D D
Sbjct: 1447 QKAMDFDRDILSALAEVEQLSKMVSEAKLRADEAKLNAQNVLLKTNATKEKVDKSNEDLR 1506
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T ++ + +++ +E I
Sbjct: 1507 NLIKQIRNFLTQDSADLDSIEAVADEVLKMGMPSTPQQLQNLTQDIRERVESLSQVELIL 1566
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 1567 QQSAADVARAEMLLEEAKRASKNATDVKVTADMVKEALEEAEKAQIAAEKAIKLAVEDIQ 1626
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 1627 G-TQNLLTSIESEATASEETLLNASQRISELERNMEEL 1663
>gi|41409706|ref|NP_962542.1| LprK [Mycobacterium avium subsp. paratuberculosis K-10]
gi|254777450|ref|ZP_05218966.1| LprK [Mycobacterium avium subsp. avium ATCC 25291]
gi|41398538|gb|AAS06158.1| LprK [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 386
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 15/121 (12%)
Query: 13 FVVSILFFSFFSIYWLS-------RSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGI 63
+ + S W + +++P + ++G +S V +
Sbjct: 15 LTLLVAAMVLTSCGWKGISNVSIPGGPGSGPNSYNIYVQVPDTLAING---NSKVMVADV 71
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG I + L + I + L + TA I L G ++EL+
Sbjct: 72 FVGSIKAIQL---KNWIATLTLGINKNVKLPKNATAKIGQTSLLGSQHVELAAPPNPSPE 128
Query: 124 I 124
+
Sbjct: 129 L 129
>gi|146343340|ref|YP_001208388.1| putative methyl-accepting chemotaxis protein [Bradyrhizobium sp.
ORS278]
gi|146196146|emb|CAL80173.1| putative methyl-accepting chemotaxis protein [Bradyrhizobium sp.
ORS278]
Length = 563
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 30/294 (10%), Positives = 84/294 (28%), Gaps = 18/294 (6%)
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
E+ +A + A S + +S + +
Sbjct: 268 RAEQAEAEKLAAERRKRDMHALANSFEGAVGEIINTVSSASTELEASASTLTSTAERTQQ 327
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
Q N+Q ++ + S V V+++ + E + S
Sbjct: 328 RTTAVAAASEQATANVQSVASATEELSSSVTEISRQVQDSARIANEAVDQARRTNDRVSE 387
Query: 291 KMKSKETSAFLENIADSTSN-----MRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
K+ + + ++ + ++ + + ++ + +
Sbjct: 388 LSKAAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVATEVKALAEQTAKA 447
Query: 346 SQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + + +S I +++ A++E + + T E+ I N+Q
Sbjct: 448 TGEIGQQISGIQAATQDSVGAIREISGTIEKLAEISSTIAAAVEEQGAATQEISRNIQQA 507
Query: 401 SQ------SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GREKGSVK 446
+Q S + D+Q+ + + ++ + GR +V+
Sbjct: 508 AQGTHEVSSNITDVQHGAAETGSASSQVLSAAQTLSQDSNRLKLEVGRFLSTVR 561
>gi|300782535|ref|YP_003762826.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|41581799|gb|AAS07743.1| putative secreted protein [Amycolatopsis mediterranei S699]
gi|299792049|gb|ADJ42424.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 441
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 27/271 (9%), Positives = 73/271 (26%), Gaps = 8/271 (2%)
Query: 17 ILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQE 76
I ++ ++ P+ V ++ + L S V+ G+ VG + + + +
Sbjct: 14 IAVMVGGVALSIALYDKAFTPVVTVRLQADKIGNQLIKQSDVKVRGLIVGSVQDI-VATD 72
Query: 77 YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQRA 135
+ + + +A + L G ++ KTI R
Sbjct: 73 HGAELTLALQPESAKLIPENVSARFLPKTLFGERFVSLEIPKDPSAKTIADGDVIPQDRT 132
Query: 136 MITATPSGINYFISNA------ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + S ++ S +Q + + L+ I ++
Sbjct: 133 SSAIELDQAFEHLMPVLQAVQPQKLSATLTAISTALQGRGDQLGDTLSQLGTYIGELNPH 192
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
++ + + ++ T + + +
Sbjct: 193 EPELQHNLKALAEFSDHLKDAAPDLVQSLDNLSTTTRTVVDERQNLSNLYGSLTQASVDL 252
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ D +I+ V R T + + +
Sbjct: 253 QTFLQNNKDNIISLVDTARPTAELLAKYAPE 283
>gi|115523332|ref|YP_780243.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
gi|115517279|gb|ABJ05263.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
Length = 565
Score = 43.0 bits (98), Expect = 0.10, Method: Composition-based stats.
Identities = 20/231 (8%), Positives = 69/231 (29%), Gaps = 16/231 (6%)
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + + + N+Q ++ + S V V+++ + E +
Sbjct: 321 TSTAARSQQLATVVASASEEASTNVQSVASATEEMSSSVNEISRQVQDSARIANEAVDQA 380
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSN-----MRSSISAIREITDQRQKIISTINTIE 336
K+ + + ++ + ++ + + + ++
Sbjct: 381 RKTNDRVGELSKAAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVK 440
Query: 337 NITSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ ++ + + + I ++SA+KE + T E+
Sbjct: 441 ALAEQTAKATGEIGQQIGSIQAATQESVSAIKEISDTIARMSEIASTIASAVEEQGAATQ 500
Query: 392 SIGNNLQNFS------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
I N+Q + + ++D+Q + + + R+ +
Sbjct: 501 EISRNVQQAAHGTQQVSANISDVQRGAGETGSASSEVLAAAQSLSRDSNRL 551
>gi|261211630|ref|ZP_05925917.1| paraquat-inducible protein B [Vibrio sp. RC341]
gi|260838980|gb|EEX65612.1| paraquat-inducible protein B [Vibrio sp. RC341]
Length = 879
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVTVGSVTAVNLKLDY---------VELNVLIDEQYGALIRSQN 455
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 16/128 (12%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP--DTPL 93
G + GSV+ + V + I VG+++ + L E+ + + I P L
Sbjct: 748 GKTYTLQSEKRGSVN---VGTPVLYRDIEVGKVIDVRL-GEFADRVITTIRIAPPYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
++
Sbjct: 864 QAQDEWSK 871
Score = 41.1 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMALAGWLVFKA-----IHDAGVRIQIHF-DNAQGLVAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLDSIYVEADIYPEATQLLSNQTRFWM 111
Score = 40.7 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 18/164 (10%), Positives = 41/164 (25%), Gaps = 4/164 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ + V++ G+ +G + + D E A I P A +Q
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFES-EFVKLSARIEPQY---APKIAKQNSQFWLSQA 705
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
I LS + + + Q + + + R +
Sbjct: 706 KIGLSGIENVQNLLGQSIEVQPGVGDSRYEFELHKEARHGGAGKTYTLQSEKRGSVNVGT 765
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ I+ A+ + ++ +
Sbjct: 766 PVLYRDIEVGKVIDVRLGEFADRVITTIRIAPPYTYLLRQNSVF 809
>gi|289673096|ref|ZP_06493986.1| PqiB family protein [Pseudomonas syringae pv. syringae FF5]
Length = 263
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 26/104 (25%), Gaps = 2/104 (1%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTP 92
+ + + L S + F I VG++V L ++ D
Sbjct: 161 FGEKGKRFTLH-TDDLGSLDIGSPIYFRRIQVGQVVAYDLSKDGRGVDIQIFINAPNDQY 219
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAM 136
+ T + + + + +I +
Sbjct: 220 ITTDTRFWNASGVDITVGASGVKVNTQSLTSIISGGIAFREPHW 263
Score = 40.3 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 31/91 (34%), Gaps = 5/91 (5%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
E K V L + + + I + + + + +GL + + V++
Sbjct: 16 EVKRRRLRVSLIWLVPIVAAIIGI--SMALHDWMNIGPRITVSFLT-AEGLEANKTQVKY 72
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ +G + + L + H LA +
Sbjct: 73 KNVVIGMVTDISLS-DDRTHVLATIELNTSA 102
>gi|111023085|ref|YP_706057.1| MCE family protein [Rhodococcus jostii RHA1]
gi|110822615|gb|ABG97899.1| possible MCE family protein [Rhodococcus jostii RHA1]
Length = 350
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 11/97 (11%), Positives = 25/97 (25%), Gaps = 1/97 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
V+ + S + V +P + + ++V + G VG + +
Sbjct: 18 VIGVAVLILGSALLVGFGTGTIVTDPVVTATLPADAGAVKSHTTVSYKGATVGTVSSVDP 77
Query: 74 DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ S + + L G
Sbjct: 78 GMNETGM-DISLRPEQMRHIPASVQVRVVPRTLFGDQ 113
>gi|55742222|ref|NP_001006805.1| myosin, heavy chain 2, skeletal muscle, adult [Xenopus (Silurana)
tropicalis]
gi|50368680|gb|AAH76678.1| myosin, heavy polypeptide 13, skeletal muscle [Xenopus (Silurana)
tropicalis]
Length = 1939
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 26/326 (7%), Positives = 90/326 (27%), Gaps = 17/326 (5%)
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ A + E +S +R Q + E+ + +
Sbjct: 1272 IINDLTAQKARLQTENGELSRQLEEKESLVSQLTRGKQGFTQQTEELKRQLEEETKAKNA 1331
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ S + ++K + + Q E ++
Sbjct: 1332 LAHALQSSRHDCDLLREQYEEEQEAKAELQRSLSKANTEVSQWRTKYETDAIQRTEELEE 1391
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLEN 303
+ + + V V + ++ Q++ + D + + N
Sbjct: 1392 AKKKLAQRLQEAEEQVEAVNSKCASLEKTKQRLQAEVEDLMVDVERANSAAAALDKKQRN 1451
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA- 361
+ + + QK ++ I + + ++ + + + N+
Sbjct: 1452 FDKVLVEWKQKYEESQAELEASQKESRSLSTEIFKMKNAYEEALEHLETMKRENKNLQQE 1511
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR-------- 413
+ + + ++ + +++ + + L+ S ++ ++R
Sbjct: 1512 ISDLSEQIGESAKTTMELEKAKKQVEQERGDLQAALEEAEGSLEHEEAKILRIQLELNQV 1571
Query: 414 --KLQETVNHFDDCLNNFERNPQDIV 437
++ + D+ + +RN Q ++
Sbjct: 1572 KSEVDRKIAEKDEEIEQLKRNSQRVI 1597
>gi|115711984|ref|XP_789361.2| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
gi|115964438|ref|XP_001190645.1| PREDICTED: hypothetical protein [Strongylocentrotus purpuratus]
Length = 2381
Score = 43.0 bits (98), Expect = 0.11, Method: Composition-based stats.
Identities = 24/277 (8%), Positives = 81/277 (29%), Gaps = 6/277 (2%)
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+E + + + + + + + + L+
Sbjct: 2070 DKNRRLEQELNTAKAKMKLMRRKLKELESPELRISTLQSEFERERINMDGTMANIRRQLE 2129
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
VNQ LE + + K + ++ ++ + + ++ + L + S
Sbjct: 2130 DVNQQLERENLLRMDLEKDNRRLQQEINSSKSALKNKDKLERSKRKLQDELSQTRHLLTH 2189
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
+ M + + + R K+ I L + + + +
Sbjct: 2190 QPSGSLTRTDSFQMSMQHNYVEKGEVDRYKLELDAKARSEINQKLEQVNAYLEQQSAARD 2249
Query: 358 NISALKENNSLFK--DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+ ++++ + + + + + ++ I + Q +Q ++
Sbjct: 2250 QLDQIRQSGEEEAKREIEDTITNLKTETSQLRSTIHELQ--TQKATQET--EVARFKELY 2305
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
+ V + + +R +V + ++ +K KH
Sbjct: 2306 RREVETRERLGADLDRTQNRLVDLTTRMTMDRHKTKH 2342
>gi|126432725|ref|YP_001068416.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126232525|gb|ABN95925.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 382
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
V +++P ++ L+ +S VR + VG + + L + K I+P L + A
Sbjct: 48 TVYVQMPDTLA-LNVNSRVRVADVFVGTVRAIEL---KNWVATLKLGIQPGVELPSNALA 103
Query: 100 TIRTQGLAGITYIE-LSTLRKEKKTIFQIATER 131
I L G ++E + + + T
Sbjct: 104 KIGQTSLLGSQHVELEAPPDPSSEPLRDGDTIP 136
>gi|149921040|ref|ZP_01909500.1| hypothetical protein PPSIR1_03048 [Plesiocystis pacifica SIR-1]
gi|149818172|gb|EDM77628.1| hypothetical protein PPSIR1_03048 [Plesiocystis pacifica SIR-1]
Length = 287
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+ +GL + V G+ VG + L + A+A D A + L
Sbjct: 35 NAEGLEPGTPVWALGVHVGTVESLQVRANA-VIVHARAEGEHDPGFAADACAVVEDGALK 93
>gi|124028238|ref|YP_001013558.1| hypothetical protein Hbut_1389 [Hyperthermus butylicus DSM 5456]
gi|123978932|gb|ABM81213.1| hypothetical protein Hbut_1389 [Hyperthermus butylicus DSM 5456]
Length = 835
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 39/427 (9%), Positives = 99/427 (23%), Gaps = 49/427 (11%)
Query: 58 VRFNGIPVGRIV--------GLFLDQEYPN------HSLAKALIRPDTPLYPSTTATIRT 103
V NG+ V R+ +D + H ++ + +
Sbjct: 325 VNINGVQVSRVALWGWPNNGAARIDPDGSLGTCTACHPRHLFSVKQAREPWTCGQCHLGY 384
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERN--QRAMITATPSGINYFISNAENTSKKISDS 161
Y E + E+ + + P+ +S + + I
Sbjct: 385 DHPHIEIYEESKHGNIWDAYGHEWNWEQIPWRVGVDFNAPTCATCHMSTLADANGNILVP 444
Query: 162 -----------SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ P ++ +VL + + +
Sbjct: 445 GTHDLARRLVWDQMHFFSHPKPVIPDKLQVSLFLGGFSVLKGKMEDVYAAAEKIPESSPY 504
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
I D + + + + L+ + K + R
Sbjct: 505 KYPVFMGLKIVDEVKPGEPGFPRLLKIEYTGELKEHREEMKAVCKLCHSSQWVDNFFRTA 564
Query: 271 TQTFQEVGQKID------------HLLSDFSSKMKSKETSAFL------ENIADSTSNMR 312
Q + + + + + E + + M
Sbjct: 565 DQNIIDYDVVARFAFSLLQLAWNEGIHDNTNPLDEYMEIMWYYIWHHEGRRWRNGVFMMG 624
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ I D + + I + + L E + +
Sbjct: 625 PDFAHWFGIVDTVLDKLGRMTNYLYIAMKVRLLETELQALKQAAAGAPYTPELAAQIAEL 684
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFS---QSGLNDIQNLVRKLQETVNHFDDCLNNF 429
Q+ + T + + +P++ + +Q+ S ++ L + + D+
Sbjct: 685 QKELETLKQQLAALEAQVPALKSQIQSLEAGYSSVEGELGTLKTDVSTLLQQLDELSKQL 744
Query: 430 ER-NPQD 435
E +PQ
Sbjct: 745 EALSPQA 751
>gi|306823953|ref|ZP_07457327.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|309802410|ref|ZP_07696517.1| YhgE/Pip C-terminal domain protein [Bifidobacterium dentium
JCVIHMP022]
gi|304552951|gb|EFM40864.1| conserved hypothetical protein [Bifidobacterium dentium ATCC 27679]
gi|308221010|gb|EFO77315.1| YhgE/Pip C-terminal domain protein [Bifidobacterium dentium
JCVIHMP022]
Length = 757
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 32/427 (7%), Positives = 106/427 (24%), Gaps = 34/427 (7%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ L V L W + + +D G+ L + V +
Sbjct: 19 VIALIVSMGLVIVPALYAWFNIAASWDPY---------GNTKALK---------VAVANV 60
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + Q + ++ K I
Sbjct: 61 DS----GYKSELIPVRINVGETVLSAVRANHQLDWQFVDSAKAVDGVKSGKYYAAIVIPK 116
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + I+ T +
Sbjct: 117 SFSADMMTLFSPTVKHATLKYYLNEKINPIAPHITDEGASTVANTIDKTFAKTMAQVGLD 176
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ A+ + + T +T +S+ +TI+ ++ + +L +
Sbjct: 177 LAADMLQYSQSPQMTQYMTNLTSNIDGMVSTISGAQAQVNAY---------STLLGSADS 227
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ K R+T + + ++ + + A +
Sbjct: 228 VITSTDKLLASTRKAGKQARKTLKQSGTSTSTLTDACTNVTDAVNQALQQAVSALDDVAD 287
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ ++ T + + + + + + + + ++ S + + +L
Sbjct: 288 KVGTAFDQLDKDATGAAKTLQDLSSQVSSSANVYGNYIAQLEKMRSAVEGLPDGDSKQAL 347
Query: 369 FKDAQRAMHTFRDT---SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
+ + + ++ + + + + S D Q ++ ++
Sbjct: 348 LNAIDKQIAALQAAQQDTQDLATALAAASKQVAADSGDIQRDRQQILNRITTAKRSITTV 407
Query: 426 LNNFERN 432
+++E+N
Sbjct: 408 QSDYEQN 414
>gi|308161758|gb|EFO64193.1| Coiled-coil protein [Giardia lamblia P15]
Length = 1831
Score = 42.6 bits (97), Expect = 0.12, Method: Composition-based stats.
Identities = 32/343 (9%), Positives = 89/343 (25%), Gaps = 12/343 (3%)
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERN-QRAMITATPSGINYFISNAENTSKKI 158
+ +Q ++ E + + A + + I A+
Sbjct: 1172 RLYSQRPVSLSEPECQFILGFTANGWVTAFDWPFRIPKAIYRRRLHGSDIIAAKLIRGST 1231
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ + II +I + + + + + +
Sbjct: 1232 LFTLSADELIISHIRFLIPASSIFSGADKSQHFRMLKSAFQADDNVESLLLKLPITQYLP 1291
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR-ETTQTFQEV 277
+ S + K +L N + + + D + T ++
Sbjct: 1292 VMPFDHCSRTVAYGSGLDSKFFNMLVNAADIWVSTDYRASLIKEATRDKAGKITSKLSQM 1351
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
I + + + + T + + + + ++I I +E
Sbjct: 1352 KATIASAIQQLDQQNSGGDQENSKMEVEFDTDHEHALVETQERYQTRIEQIRKDIADLEQ 1411
Query: 338 ITSNLNDSSQKF-AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN 396
+ N + + + L + NI +E + + ++ ++ + I
Sbjct: 1412 MLKNEAERYESSRSSLQKRFENIINYEETMRM-----ATVANLNAQIDQQDQALSKIEAA 1466
Query: 397 LQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
L I + R+ + V + E+N + G
Sbjct: 1467 YNEE----LRQIDDERREALKAVEQIGETAVEREKNASATLRG 1505
>gi|319785678|ref|YP_004145153.1| methyl-accepting chemotaxis sensory transducer [Pseudoxanthomonas
suwonensis 11-1]
gi|317464190|gb|ADV25922.1| methyl-accepting chemotaxis sensory transducer [Pseudoxanthomonas
suwonensis 11-1]
Length = 750
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 46/433 (10%), Positives = 112/433 (25%), Gaps = 16/433 (3%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
T V +F V L + + P+A G + VG
Sbjct: 189 RTRVAMFAVLGLAIVLGVFLGIVFTRSLTLPLARAAAAARDLAAGRIEGERLTGGRDEVG 248
Query: 67 RI------VGLFLDQEYPNHSLAKALIRPDTP----LYPSTTATIRTQGLAGITYIELST 116
+ + L + + RT I
Sbjct: 249 EVLRAVQATRVSLRTLLDGMAEMGRQHDEGHISARLDPEAVQGEYRTLSELINAQIGSHI 308
Query: 117 LRKEKKTIFQIATERNQ-RAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
A R R P + + + S I +
Sbjct: 309 DAALLAAHMAGAYARGDLREDFPRLPGEKAVLMHAMDEVKSNMLALSEEIGTLSGAAVHG 368
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ N + +++++++M T + S DL +D + +
Sbjct: 369 DFSQRGNEARFEFGFRDMVANLNRLMATADGSLQSLSHLLRDVADGDLTARMDGEYEGVF 428
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ ++ + + + + E +Q ++ ++ + ++ +
Sbjct: 429 ADMRDAANATVRNLTGIVGRIQQASGSINNAAAEISQGNADLARRTEQQAANLEET--AA 486
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + + R + + + + S + DSS++ +E++S
Sbjct: 487 SMEELTSTVRQNAEHARQANQLAIGAAGVASEGGVVVGQVVETMSAIEDSSRRISEIISV 546
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
I+ I+ +L + A + + S L S +I+ L+
Sbjct: 547 IDGIAFQTNILALNAAVEAARA---GEQGRGFAVVASEVRTLAQRSAGAAKEIKQLIDDS 603
Query: 416 QETVNHFDDCLNN 428
+ V +
Sbjct: 604 VQKVADGSGLVRK 616
>gi|158521604|ref|YP_001529474.1| hypothetical protein Dole_1593 [Desulfococcus oleovorans Hxd3]
gi|158510430|gb|ABW67397.1| hypothetical protein Dole_1593 [Desulfococcus oleovorans Hxd3]
Length = 230
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 31/115 (26%), Gaps = 11/115 (9%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+ +++ S+ + + +W ++ V +R V GL V
Sbjct: 1 MK-RSHAISIWTATMLAVMTLCTGWFWSGKA---------VSVRF-DQVHGLKDGDRVLS 49
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
G +G + + + + + + +I
Sbjct: 50 EGTAIGNVTDVDYQDNGRFLVSLRIDKQFGDRVTEYASFSIVRDPEDNSRMAVDM 104
>gi|210063369|gb|ACJ06523.1| smooth muscle myosin heavy chain isoform SM1 [Xenopus laevis]
Length = 923
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 24/369 (6%), Positives = 97/369 (26%), Gaps = 1/369 (0%)
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L E ++ TI + L +K + + ++
Sbjct: 155 VEELTEQLEQVKRVRVTLEKSKQALEKDNSDFTIEIKSLNTAKQDVEHKKKKLESQLQEL 214
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
++ + I + + + + + + LT + + + +
Sbjct: 215 QSKYSDGERIRNELTEKSQRVQVELENVTVLLSEAETKSIKLSKDVAGLTAQLQDTQELL 274
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
++ + + +S + T I L + L+
Sbjct: 275 QEETRQKLNVSTKLRQVEDERNSLQEQLDEETEAKQNLERHISTLNIQLSDSKKKLQEFT 334
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + + + + + + K++ + ++ + S
Sbjct: 335 STIETMEEGKKKFQRDIEGMTQQFEEKASAYDKLEKTKTRLQQELDDLIVDLENQRQLVS 394
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ ++ ++ + + + + +E
Sbjct: 395 NLEKKQKKFDQMLAEEKNVSSKYADERDRAEAEAREKETKALSLARALDEALQSKEELER 454
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
K + M + + + + + + + + + +++ + +L++ + +D
Sbjct: 455 TNKLLKAEMEDLVSSKDDVGKNVHDL-EKAKRGLEQQVEEMKTQLEELEDELQATEDAKL 513
Query: 428 NFERNPQDI 436
E N Q +
Sbjct: 514 RLEVNMQAL 522
>gi|108797102|ref|YP_637299.1| virulence factor MCE-like protein [Mycobacterium sp. MCS]
gi|119866187|ref|YP_936139.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
gi|108767521|gb|ABG06243.1| Mammalian cell entry [Mycobacterium sp. MCS]
gi|119692276|gb|ABL89349.1| virulence factor Mce family protein [Mycobacterium sp. KMS]
Length = 382
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 5/93 (5%)
Query: 40 EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
V +++P ++ L+ +S VR + VG + + L + K I+P L + A
Sbjct: 48 TVYVQMPDTLA-LNVNSRVRVADVFVGTVRAIEL---KNWVATLKLGIQPGVELPSNALA 103
Query: 100 TIRTQGLAGITYIE-LSTLRKEKKTIFQIATER 131
I L G ++E + + + T
Sbjct: 104 KIGQTSLLGSQHVELEAPPDPSSEPLRDGDTIP 136
>gi|160332465|dbj|BAF93223.1| myosin heavy chain fast skeletal type 2 [Hypophthalmichthys molitrix]
Length = 1935
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 29/325 (8%), Positives = 93/325 (28%), Gaps = 17/325 (5%)
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ A + E +S +R Q + IE+ ++ + +
Sbjct: 1270 INDLSAQKARFQTENGEMGRQLEEKEALVSQLTRSKQAYTQQIEELKRQIEEEVKAKNAL 1329
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S + ++K+ S +A Q E ++ +
Sbjct: 1330 AHAVQSSRHDCDLLREQYEEEQEAKSELQRSMSKANSEVAQWRAKYETDAIQRTEELEEA 1389
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENI 304
+ ++ V + ++ Q++ + + D + + N
Sbjct: 1390 KRKLAQRLQDAEESIEAVNAKCASLEKTKQRLQNEVEDLMIDVERANALAANLDKKQRNF 1449
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-L 362
+ + + + K ++ + + ++ ++ + L + N+ +
Sbjct: 1450 DKVLAEWKQKYEESQAELEGSLKETRSLSTELFKMKNSYEEALDQLETLKRENKNLQQEI 1509
Query: 363 KENNSLFKDAQRAMHTFRD-------TSEKINRYIPSIGNNLQNFSQSGLN---DIQNLV 412
+ + + +H +I + L++ L ++ +
Sbjct: 1510 SDLTEQLGETGKTIHELEKGKKTAEIEKSEIQAALEEAEATLEHEESKILRVQLELNQVK 1569
Query: 413 RKLQETVNHFDDCLNNFERNPQDIV 437
++ + D+ + +RN Q I+
Sbjct: 1570 GEIDRKLAEKDEEIEQIKRNSQRII 1594
>gi|210063371|gb|ACJ06524.1| smooth muscle myosin heavy chain isoform SM2 [Xenopus laevis]
Length = 886
Score = 42.6 bits (97), Expect = 0.13, Method: Composition-based stats.
Identities = 24/369 (6%), Positives = 97/369 (26%), Gaps = 1/369 (0%)
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ L E ++ TI + L +K + + ++
Sbjct: 155 VEELTEQLEQVKRVRVTLEKSKQALEKDNSDFTIEIKSLNTAKQDVEHKKKKLESQLQEL 214
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
++ + I + + + + + + LT + + + +
Sbjct: 215 QSKYSDGERIRNELTEKSQRVQVELENVTVLLSEAETKSIKLSKDVAGLTAQLQDTQELL 274
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
++ + + +S + T I L + L+
Sbjct: 275 QEETRQKLNVSTKLRQVEDERNSLQEQLDEETEAKQNLERHISTLNIQLSDSKKKLQEFT 334
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + + + + + + K++ + ++ + S
Sbjct: 335 STIETMEEGKKKFQRDIEGMTQQFEEKASAYDKLEKTKTRLQQELDDLIVDLENQRQLVS 394
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ ++ ++ + + + + +E
Sbjct: 395 NLEKKQKKFDQMLAEEKNVSSKYADERDRAEAEAREKETKALSLARALDEALQSKEELER 454
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
K + M + + + + + + + + + +++ + +L++ + +D
Sbjct: 455 TNKLLKAEMEDLVSSKDDVGKNVHDL-EKAKRGLEQQVEEMKTQLEELEDELQATEDAKL 513
Query: 428 NFERNPQDI 436
E N Q +
Sbjct: 514 RLEVNMQAL 522
>gi|328696802|ref|XP_001948917.2| PREDICTED: hypothetical protein LOC100168326 [Acyrthosiphon pisum]
Length = 1156
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 36/384 (9%), Positives = 101/384 (26%), Gaps = 27/384 (7%)
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAG----ITYIELSTLRKE 120
VG IV ++ I D + S AT L + L +
Sbjct: 403 VGTIVKIY--DNRYFKVEVDNEIDEDKRI--SFVATKENPYLFQAGWASKHKFLLKPPTD 458
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ + + S N +N + + +
Sbjct: 459 WNKPEKFSWSKYLIRKDAKFASVDNSCRKKIDNVHIGMKLEAVDPLNTDCIRVATVKGFA 518
Query: 181 ANIETISTVLANNISHIDKMMHTTQ--------VTPHSSDSKNTFNTITDLITSLDKMIK 232
+ +S + + + H D
Sbjct: 519 DHWMFLSFDRTSCCQELLHLRSVYSDEVFPVGWCNKHKYSLGAPKLPYNDSNDFEHCYYS 578
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ ++Q +++ ++K + D F + ++I+ + S
Sbjct: 579 SDVDIDLSQSDQDLSKKYPRYLKGEIFYHFSKKDK----INFDDGFEEIEDDIKSEDSDS 634
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
S + I + + ++ + + N N ++
Sbjct: 635 DSVNNIPLVSEIEIKKDSADEYDNDPIFDAKDEPELDEEFHDALFLDEN-NIKPEEVDIK 693
Query: 353 MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
+ +NI E +++ + + ++++ + + N + ++ ++ +
Sbjct: 694 PEEYDNI--PDEVDNIPDEVDNIPDEVDNILDEVDYKLEEV--NYKPAKRNNAEEVN--L 747
Query: 413 RKLQETVNHFDDCLNNFERNPQDI 436
++ V H + ++N RN +
Sbjct: 748 NNKKKKVYHVEKSIDNVVRNSSKL 771
>gi|118466982|ref|YP_884131.1| virulence factor Mce [Mycobacterium avium 104]
gi|118168269|gb|ABK69166.1| virulence factor Mce family protein [Mycobacterium avium 104]
Length = 596
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 38/121 (31%), Gaps = 15/121 (12%)
Query: 13 FVVSILFFSFFSIYWLS-------RSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGI 63
+ + S W + +++P + ++G +S V +
Sbjct: 15 LTLLVAAMVLTSCGWKGISNVSIPGGPGSGPNSYNIYVQVPDTLAING---NSKVMVADV 71
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
VG I + L + I + L + TA I L G ++EL+
Sbjct: 72 FVGSIKAIQL---KNWIATLTLGINKNVKLPKNATAKIGQTSLLGSQHVELAAPPNPSPE 128
Query: 124 I 124
+
Sbjct: 129 L 129
>gi|328700493|ref|XP_001950530.2| PREDICTED: laminin subunit alpha-1-like [Acyrthosiphon pisum]
Length = 3098
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 36/367 (9%), Positives = 99/367 (26%), Gaps = 13/367 (3%)
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS-- 155
T ++ Q + + + + + + ++ ++ E
Sbjct: 1758 TVQLKQQNFESLNDLNKMIEDINHLDLTFSTIQGDTKELLKEARENYFSSLNKLEELLLI 1817
Query: 156 --KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
K + + N + N I + + +
Sbjct: 1818 KPKLENIKKNMNKGKDFNPRFDDDQLLVNSAEIHANYLLQTAQKYAELFKPIRHDANIAL 1877
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ + + + + AI+ + D+ + T +
Sbjct: 1878 EASNAYLNIVDSLQLARNAAINASILADTSFKTAYPGVYQESLIDKAKTAEELSKLTYSS 1937
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ +D L SDF ++ ET N+ S E ++ ++
Sbjct: 1938 TTDIKNIVDSLQSDFDIQVDEIETIKNDMKQIVKNDNLNSKQITELEQSEGMNMELNNKE 1997
Query: 334 TIENITSNLNDSSQKFAELMSKINNISA------LKENNSLFKDAQRAMHTFRDTSEKIN 387
++ + ++ K + I+N +E AQ + + +K
Sbjct: 1998 DVDPLVIASSNVETKIKNIQDNIDNKLRPVLAQLNEEGEPSLTIAQDRIDETEEHGKKAI 2057
Query: 388 RYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ I ++FS+ + + L+ + + + G +
Sbjct: 2058 DMLSRILKTSEDFSKKVAAFNHSMNAKLEALRNKITKAHQIADGIRISISGQENGTDNAC 2117
Query: 445 VKIYKPK 451
++ Y+PK
Sbjct: 2118 IRTYQPK 2124
>gi|254785468|ref|YP_003072897.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Teredinibacter turnerae T7901]
gi|237684415|gb|ACR11679.1| putative methyl-accepting chemotaxis sensory transducer with
Pas/Pac sensor [Teredinibacter turnerae T7901]
Length = 913
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 31/374 (8%), Positives = 99/374 (26%), Gaps = 9/374 (2%)
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
+ V +G +G +V D + +++ +
Sbjct: 500 NPVTVDGQRIGTVVEWK-----DRTEEVAIEREVDEIIEAASSGDFSKHIVLDGKTGFFE 554
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
L K + + + + +
Sbjct: 555 VLAKGLNDLISTTEVALNDIIRMLGAMARGDLSERITRDYQGSFGRMKDDANETADKLTD 614
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ + + + AN I+ + + SS + + T A
Sbjct: 615 VISKLRTAAGSISAAANEIAQGNADLSQRTEQQASSLEETASSMEEMTSTVKQSADNAAQ 674
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+N + V + ++ ++ + V +I ++ + +
Sbjct: 675 ASTSALDAQNKARTGGEVVSRAVNSMDEINAASKRISDIIGVIDEI-AFQTNLLALNAAV 733
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
E + E + + ++I I + + +S+
Sbjct: 734 EAARAGEQGRGFAVVAGEVRNLAQRSAAAAKEIKDLIRDSVKKVQDGTALVNESGTTLSE 793
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
I +++++E S+ ++ A E++N + + + + + + + ++ +
Sbjct: 794 I--VASVEEVTSMMREIADASKEQTSGIEQVNTAVAQM-DEMTQQNAALVEEVSAAGESM 850
Query: 416 QETVNHFDDCLNNF 429
E + ++ F
Sbjct: 851 AEQARAMNQIVDFF 864
>gi|261252943|ref|ZP_05945516.1| paraquat-inducible protein B [Vibrio orientalis CIP 102891]
gi|260936334|gb|EEX92323.1| paraquat-inducible protein B [Vibrio orientalis CIP 102891]
Length = 846
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ GL +++ + GI +G + + LD++ LI
Sbjct: 374 DNSFGLDKGANILYRGISIGSVTQVSLDKD---KVHFDILIDSTY 415
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 8/116 (6%), Positives = 28/116 (24%), Gaps = 1/116 (0%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQ 104
S ++ + V + I VG + + L + + ++ +
Sbjct: 722 SESRGSIAIGTPVLYRDIEVGEVTHVQLGEFADRIVSNIVIRPEYAYLVRQNSVFWNASG 781
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
I + ++ + + P + +++
Sbjct: 782 VDVSIGLTGANIKAGTFDSLVRGGISFSTPEQSQLQPIAKHGHTFYLNAKAEENWK 837
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQ 104
+ G+S S + + IP+G + LD + N + A + + +
Sbjct: 139 SRDLGGISVGSQIVYRKIPIGEVYSYQLDSQSKNVIIQASIQDEYRHIITDDSRFWNVSG 198
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRA 135
A I + + + + + +
Sbjct: 199 IGANIGFQGVDVRLESLSALIGGSIAVDSPD 229
>gi|299822739|ref|ZP_07054625.1| septation ring formation regulator EzrA [Listeria grayi DSM 20601]
gi|299816268|gb|EFI83506.1| septation ring formation regulator EzrA [Listeria grayi DSM 20601]
Length = 567
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 52/446 (11%), Positives = 130/446 (29%), Gaps = 30/446 (6%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
Y + V+ I + Q + + I V +G
Sbjct: 4 YILLAFVVIVIAILVSGYLLKKRHYQQINELETKKITLYDRPVID------------ELG 51
Query: 67 RIVGLFLDQEYPNHSLA--KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
++ L L + + ++ + L+P T + Y + E
Sbjct: 52 KVKKLKLTGQTEELFESWRESWDEIASKLFPDLEETFMEAEMHVDKYQFRAATNVENDIE 111
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+A Q I A + S+ + +++ + L T A IE
Sbjct: 112 QMLAVIEKQMDSILAGLHELLQSEEKNAEESRTTKEKFAGLRREVLTRGFKLGNTRAEIE 171
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
LA ++ D + K+ + + ++K+ + +V +
Sbjct: 172 QKLDQLALELNEYDHLTDQGDHLEAREKVKHVQVELQQVEVEMEKIPNLLHETEVALPDD 231
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+++ + D ++ T +E +K+ + + + + A + +
Sbjct: 232 IGKLNEGHEEMVRDGFYLAHLEIPSETSRMREQLEKLRATIQNLDLEAAEEGVVALHKEL 291
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA-------------- 350
+ ++A R + D R I I + + ++ ++
Sbjct: 292 DLFYDELEKEVTAKRFVKDNRSVIGEKITNLIQVADSVAVQIEEVKQTYHVGEDELATYL 351
Query: 351 ELMSKINNISALKENNSLFKDAQR-AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQ 409
+ K+ S E + A +DT ++I + I F+ L ++
Sbjct: 352 KTSEKLEKQSESYEQVITLLQSNEIAFSAAQDTFKEIEIALNEITLEQDEFTGE-LRSLR 410
Query: 410 NLVRKLQETVNHFDDCLNNFERNPQD 435
+ ++ + + +R +
Sbjct: 411 KDELEARDAASAMRRTVIGLDRKIER 436
>gi|107026970|ref|YP_624481.1| methyl-accepting chemotaxis sensory transducer [Burkholderia
cenocepacia AU 1054]
gi|105896344|gb|ABF79508.1| methyl-accepting chemotaxis sensory transducer [Burkholderia
cenocepacia AU 1054]
Length = 620
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 45/410 (10%), Positives = 123/410 (30%), Gaps = 17/410 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
WL+ G +V + +V G + +S V +G+P+G + L + +
Sbjct: 138 WLTNF-LSSGKAYDVNMDREVTVGGYMMFINSRVELDGVPIGA-ASMSLSVDALAKGI-- 193
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + A + + I ++L K + +
Sbjct: 194 ----SAYRIGETGFAYLV-RPDGAIMMHRDTSLIDGKHFLKDERGLPGDASSTLLAGKPY 248
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
Y + ++ I+ S ++ P + + A + + +
Sbjct: 249 AYLSYEGDGGARFIATSFIPELNAYVVVQVPQAELLGPVTRAIRSAALVAAVVGLGVALL 308
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ L++ + + + + + I S+ F + + V
Sbjct: 309 VIWLVGRAIAAPIRRAATLLSEIASGQGDLTRRMTVESEDEIGQLSDAFNRFVSSLSTLV 368
Query: 265 HDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
H +R + + +I +D ++ +S ++ + T+ +R++
Sbjct: 369 HRIRAASASIATGSAQIASGNADLSERTEGQSSNLERTASSMEEITAVVRNNTETATTAA 428
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT 382
T + + + ++ ++ +I+ I + ++ S +
Sbjct: 429 KMINGAADTAARGGQVVGEVVTTMEQISDASQRISEIIVMIDSISFQTNILALNAAVEAA 488
Query: 383 ----SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + S NL S +I++L+ TV ++
Sbjct: 489 RAGEQGRGFAVVASEVRNLAQRSAQAAKEIKSLIEHSAGTVGAGSRLVSE 538
>gi|307327940|ref|ZP_07607122.1| large Ala/Glu-rich protein [Streptomyces violaceusniger Tu 4113]
gi|306886458|gb|EFN17462.1| large Ala/Glu-rich protein [Streptomyces violaceusniger Tu 4113]
Length = 1342
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 16/225 (7%), Positives = 63/225 (28%), Gaps = 5/225 (2%)
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+ + N + + + + R + + Q++
Sbjct: 220 RRARNDAERLLTNAGTQAQDATDHAEQLRTTTATEADQARRNAAEQTRAAEQRMQEAEQA 279
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
E A + + + + ++ + L ++
Sbjct: 280 LREARSEAEKVVTEAKDAAAKRLTAAESDNEQRTRTAKAEVARLVGEATKEAERLRAEAE 339
Query: 348 KF-AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
+ + ++ + A +N+ + A+ + + + Q +++ ++
Sbjct: 340 QLRDDARAEAERMVAEAGDNARARAAEDSAAQLAKAARSAEEVLTRASEQAQATTKAAID 399
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + + + +E + + + + + G K K Y+ K
Sbjct: 400 EAERIRGEAEEEADRLRAEAH----DTAEQLKGTAKDDTKEYRAK 440
>gi|254773841|ref|ZP_05215357.1| hypothetical protein MaviaA2_04072 [Mycobacterium avium subsp.
avium ATCC 25291]
Length = 369
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 25/254 (9%), Positives = 79/254 (31%), Gaps = 6/254 (2%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI-- 112
+S V + + VG + + + H+ + ++ D + + AT+ L G ++
Sbjct: 4 NSPVMIDDVVVGSVGQMRVQG---WHADVEISVKRDVVVPANVVATVGQTSLLGSMHVEL 60
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
++ + AT R+ + + A + I +
Sbjct: 61 NTPLGQQGSGRLQPGATIPLSRSSAYPS-TEQTLSSLGAVVNGGGLGQIGEIIHNFSAAL 119
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
I + T + D ++ + Q + + +
Sbjct: 120 SGREGAVRDLITRLDTFVGTLDDQRDNIVDSIQALNRLAGTFAEQRDVVSQALQKVPPAL 179
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ +++ ++ + ++ V ++ D+ + + + + + + +F + +
Sbjct: 180 DVLIKERPRLTAALDKLRVFSNTATRLVNDSQADLVQNLKNLEPTIRALADVGPEFGTAI 239
Query: 293 KSKETSAFLENIAD 306
+ F +N D
Sbjct: 240 AAGFVFPFTQNFVD 253
>gi|168828765|gb|ACA33869.1| skeletal muscle myosin heavy chain [Ctenopharyngodon idella]
Length = 1751
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 91/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + I + + + ++ E M
Sbjct: 1309 QAFTRQIEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1368
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1369 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQVEAVNSKCASLEKTKQRLQGEV 1428
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F K+ ++ + E A+ + + S E+
Sbjct: 1429 EDLMIDVERANGLAANLDKKQRNFD-KILAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1487
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ T++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1488 KNSYEETLDQLETLKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKA 1541
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1542 EIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEMEQIKRNSQRVI 1597
>gi|91974547|ref|YP_567206.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
gi|91681003|gb|ABE37305.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
Length = 688
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 22/270 (8%), Positives = 69/270 (25%), Gaps = 6/270 (2%)
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ + + I + + + S + + +
Sbjct: 405 AEHKAEMHRLADNFEGAVGEIIQTVTSASTELEASAGSLTTTADRSQQLATTVAAASEQA 464
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ ++Q V E + S + + + + + + ++ + +
Sbjct: 465 SANVQSVASATEEMASSISEISRQVQTSARIAGEAVDQARKTNDRIGQLADAANRIGDVV 524
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
T A N+ + + ++ + + + S Q
Sbjct: 525 DLINTIAGQTNLLALNATIEAARAGDAGRGFAVVAQEVKALAEQTAKATGEISQQVSGMQ 584
Query: 353 MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------ 406
+ +++ A++E + T E+ I N+Q +Q
Sbjct: 585 AATQDSVGAIREIGGTIERMSEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSSNIC 644
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
D+Q + + + R+ +
Sbjct: 645 DVQRGATETGSASTQVLAAVQSLSRDSNRL 674
>gi|296165201|ref|ZP_06847748.1| Mce protein, Mce5A [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899390|gb|EFG78849.1| Mce protein, Mce5A [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 497
Score = 42.6 bits (97), Expect = 0.14, Method: Composition-based stats.
Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 2/83 (2%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEY-PNHSLAK 84
L + + + V+ + DGL S V+++G+ VG + G+ PN+
Sbjct: 1 MLLKSTGRLN-DYVRVVADLVNVGDGLPQKSDVKYHGVLVGMVDGVVPAAHGKPNYVHID 59
Query: 85 ALIRPDTPLYPSTTATIRTQGLA 107
+ TA + +
Sbjct: 60 LKQEFAKAIPAGVTARVVPSNVF 82
>gi|15828397|ref|NP_302660.1| putative lipoprotein [Mycobacterium leprae TN]
gi|221230874|ref|YP_002504290.1| putative lipoprotein [Mycobacterium leprae Br4923]
gi|13093827|emb|CAC32125.1| putative lipoprotein [Mycobacterium leprae]
gi|219933981|emb|CAR72693.1| putative lipoprotein [Mycobacterium leprae Br4923]
Length = 392
Score = 42.6 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 30/84 (35%), Gaps = 8/84 (9%)
Query: 30 RSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ +++P + ++G +S V + VG I + L + +
Sbjct: 45 GGPGSGKGAYTIYVQVPDTLAING---NSKVMVADVTVGSIRAINL---KNWVATLTLGL 98
Query: 88 RPDTPLYPSTTATIRTQGLAGITY 111
D L +TTA I L G +
Sbjct: 99 NKDVQLPKNTTAKIGQTSLLGSQH 122
>gi|116691834|ref|YP_837367.1| methyl-accepting chemotaxis sensory transducer [Burkholderia
cenocepacia HI2424]
gi|116649834|gb|ABK10474.1| methyl-accepting chemotaxis sensory transducer [Burkholderia
cenocepacia HI2424]
Length = 620
Score = 42.6 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 47/410 (11%), Positives = 126/410 (30%), Gaps = 17/410 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
WL+ G +V + +V G + +S V +G+P+G + L + +
Sbjct: 138 WLTNF-LSSGKAYDVNMDREVTVGGYMMFINSRVELDGVPIGA-ASMSLSVDALAKGI-- 193
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + A + + I ++L K + +
Sbjct: 194 ----SAYRIGETGFAYLV-RPDGAIMMHRDTSLIDGKHFLKDERGLPGDASSTLLAGKPY 248
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
Y + ++ I+ S ++ P + + A + + +
Sbjct: 249 AYLSYEGDGGARFIATSFIPELNAYVVVQVPQAELLGPVTRAIRSAALVAAVVGLGVALL 308
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ L++ + + + + + I S+ F + + V
Sbjct: 309 VIWLVGRAIAAPIRRAATLLSEIASGQGDLTRRMTVESEDEIGQLSDAFNRFVSSLSTLV 368
Query: 265 HDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
H +R + + +I +D ++ +S ++ + T+ +R++
Sbjct: 369 HRIRAASASIATGSAQIASGNADLSERTEGQSSNLERTASSMEEITAVVRNNTETATTAA 428
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA---QRAMHTF 379
T + + + ++ ++ +I+ I + ++ S + A+
Sbjct: 429 KMINGAADTAARGGQVVGEVVTTMEQISDASQRISEIIVMIDSISFQTNILALNAAVEAA 488
Query: 380 RD-TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
R + + S NL S +I++L+ TV ++
Sbjct: 489 RAGEQGRGFAVVASEVRNLAQRSAQAAKEIKSLIEHSAGTVGAGSRLVSE 538
>gi|809042|emb|CAA28839.1| laminin B1 [Mus musculus]
Length = 495
Score = 42.6 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 27/218 (12%), Positives = 74/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 151 QKAMDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLR 210
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + T++ +E I
Sbjct: 211 NLIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVIL 270
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ L+ + S + + D + A+ + I ++Q
Sbjct: 271 QQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 330
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 331 G-TQNLLTSIESETAASEETLTNASQRISKLERNVEEL 367
>gi|15614838|ref|NP_243141.1| methyl-accepting chemotaxis protein [Bacillus halodurans C-125]
gi|10174895|dbj|BAB05994.1| methyl-accepting chemotaxis protein [Bacillus halodurans C-125]
Length = 671
Score = 42.6 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 37/410 (9%), Positives = 113/410 (27%), Gaps = 19/410 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVR 59
M G+ +VS++ + + + P++ + + G L+ VR
Sbjct: 277 MLKDVNTVRNGIILVSVIALIVGMMIVILVARSITKPISRLGTHVGTVASGDLTV--DVR 334
Query: 60 FNG-IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
G VG++ + +R +TA ++ E +
Sbjct: 335 AAGNDEVGQLTE--------SFKEMLVQLRGIITTVKGSTAHVQEAADHLTAISEETIAS 386
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
E+ + + I +++S S + + +
Sbjct: 387 SEEIALAVRDVAIGSTKQV-EHLDEAKRQIDQLARQMEQMSLSMTEVGSLSNETRLAGQS 445
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
++ + T + D+M N + ++ ++ +
Sbjct: 446 GSEKVQHLKTKTLEANTVFDQMEDGLLKLSDHIMEINEVIHTINHLSEQTNLLALNASIE 505
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ E+ + + + + H+ T + + ++ D
Sbjct: 506 AARAGEHGKGFAVVANEVRRLAEQSSHETVRVGDTITGIVNRSKQVIVDMKQARS----- 560
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
E + + I + + S + + ++ ++
Sbjct: 561 ILSEQSDSVDETENTFLHMASLIKQMNETLASVQEDFGTLAEQNSQFVKRIEAVVEVAEQ 620
Query: 359 ISAL-KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+A +E N+ + A+ + +E++ + +++ F ++
Sbjct: 621 AAATSEEVNASTDEQVTALQRITEAAEQLQEASHELNQSVRQFQTESESN 670
>gi|281210356|gb|EFA84523.1| Putative chemotaxis protein [Polysphondylium pallidum PN500]
Length = 545
Score = 42.6 bits (97), Expect = 0.15, Method: Composition-based stats.
Identities = 42/496 (8%), Positives = 125/496 (25%), Gaps = 64/496 (12%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS----TDS 56
M +K + L+V+++L + + + G++
Sbjct: 1 MSNKISLILLALYVLTVLSIAMAY----PQPLVRKEDRHSFRAPFIATASGITYWNTRGD 56
Query: 57 SV---RFNGIPV------GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+V + + G+I+ + + + I + + A
Sbjct: 57 TVISEEYIHLTADAQSSWGQIINTEPLEFPSWEIVVEFRIHGNGRIGADGLALWYIDPSH 116
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSK----------- 156
+ + I + P + +
Sbjct: 117 SESRDTSVFGNRNMWKGLGIFFDTFDNDGNGDNPLVSVVYNDGTQFFDTAKDGGNMKLGG 176
Query: 157 KISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNT 216
+ + I+ +I+T S+ ++ + ++ T+ S +
Sbjct: 177 CTNKFRNVHKNTRAKIKYFNGALSIHIDTSSSGNYDSCVNDIRITLPTRYHFALSAATGG 236
Query: 217 FNTITDLITS---------LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ D+ + ++ + + +Q + Q + + + Q
Sbjct: 237 LHDNHDIYSFDTYSLDAPIRNEYRRHENYMNQHQQQQQQQQNIQQQQQQNIQQQQNQQQN 296
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
++ Q + D + + ++ + + +Q ++
Sbjct: 297 QQQPQPVAHEEDDFKAKIKDITKGFEQQQQQNQQQQQQQFQQPNQQQQQQPPVTQEQPKQ 356
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK-- 385
IS + I + + L S ++ K L +E
Sbjct: 357 TISGDDVPAQILQKVETLKESIHSLHSVLDESEVKKSVEGLRDQVNNVGQALIILTENII 416
Query: 386 -------------------------INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ + I + + + + ND+ + L ++VN
Sbjct: 417 TKKDFESFKYNYELKNSQSFKELTELKQLIGDMKATVNSRMNNNDNDVSKTLEALSQSVN 476
Query: 421 HFDDCLNNFERNPQDI 436
++ ++ Q I
Sbjct: 477 GLKRLVDAQAKDTQKI 492
>gi|116062137|dbj|BAF34699.1| fast skeletal myosin heavy chain isoform mMYH-6 [Oryzias latipes]
Length = 1935
Score = 42.2 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 34/296 (11%), Positives = 89/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1307 QAFTQQIEELKRHVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1366
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1367 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1426
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1427 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1485
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1486 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKS 1539
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ L +RN Q ++
Sbjct: 1540 EIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEELEQIKRNSQRVI 1595
>gi|323153089|gb|EFZ39357.1| hypothetical protein ECEPECA14_5006 [Escherichia coli EPECa14]
Length = 524
Score = 42.2 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 404 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 462
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 463 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 517
>gi|331677713|ref|ZP_08378388.1| mce related protein [Escherichia coli H591]
gi|331074173|gb|EGI45493.1| mce related protein [Escherichia coli H591]
Length = 640
Score = 42.2 bits (96), Expect = 0.15, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 520 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 578
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 579 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 633
>gi|116062149|dbj|BAF34705.1| fast skeletal myosin heavy chain mMYH-9 [Oryzias latipes]
Length = 1936
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 90/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E +++ + + + ++ E M
Sbjct: 1308 QAFTQQIEELKRQVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1428 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A +
Sbjct: 1487 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKSVETEKS 1540
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1541 EIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEMEQIKRNSQRVI 1596
>gi|83814750|ref|YP_445586.1| methyl-accepting chemotaxis protein [Salinibacter ruber DSM 13855]
gi|83756144|gb|ABC44257.1| methyl-accepting chemotaxis protein [Salinibacter ruber DSM 13855]
Length = 649
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 27/328 (8%), Positives = 104/328 (31%), Gaps = 19/328 (5%)
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
S + +++ ++ + ++ +E + +T+ + + ++ + I
Sbjct: 279 SFAGEAPTTPNENTEQAAEMTGQLRTKLEGAVASIRSTLQEVMSATSRANRSADEISTSS 338
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ ++ + A +Q V Q ++ + + +
Sbjct: 339 DQMAASAEEQSAQAEEVAAAVEELNQTINENARSVQSVAQSAQDGGREAREGQEVVSEAT 398
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREI 321
+ D+ Q + ++ + S +++ + A N+ + + ++ +
Sbjct: 399 GKMKDIAREVQGTADTIDRLQASSEEISQVVETIDEIANQTNLLALNAAIEAARAGGDGT 458
Query: 322 -TDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL------------KENNSL 368
++ Q + + + ++ + A+++ ++ + +E L
Sbjct: 459 GSETGQGFAVVAEEVRELADETDQATSEIADIIGEVQSEIDQAVEAAQRSSRNAEEGIEL 518
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL------NDIQNLVRKLQETVNHF 422
+ A A+ + E++ I + S + I ++ V
Sbjct: 519 SEKASEALRQIVASIEEVEAKADEIAAASEEQSTTSQEIARSVQSISTAAQESAAGVTEV 578
Query: 423 DDCLNNFERNPQDIVWGREKGSVKIYKP 450
D +R +++ + +++ +P
Sbjct: 579 SDIATTLDRVTENLETRLRQFALEQTRP 606
>gi|13431711|sp|Q90339|MYSS_CYPCA RecName: Full=Myosin heavy chain, fast skeletal muscle
gi|2351223|dbj|BAA22069.1| myosin heavy chain [Cyprinus carpio]
Length = 1935
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 41/372 (11%), Positives = 111/372 (29%), Gaps = 13/372 (3%)
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L + AKA + + I+T+ + + ++ + R
Sbjct: 1231 DLTSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENVRQLNDMNAQRARLQTENGEFSR 1290
Query: 132 N---QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ A+++ G + E + I + + + ++ E
Sbjct: 1291 QLEEKEALVSQLTRGKQAYTQQIEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEE 1350
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
M T K A LQ + +E +
Sbjct: 1351 EQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNS 1410
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ K+ ++ V D+ + + +D +F ++ + E+ A+
Sbjct: 1411 KCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELE 1469
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + S E+ + ++ +E + + Q+ ++L ++ E
Sbjct: 1470 GAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLTEQL------GETGKS 1523
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDC 425
+ ++A T +I + L++ L ++ + ++ + D+
Sbjct: 1524 IHELEKAKKTVESEKSEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEE 1583
Query: 426 LNNFERNPQDIV 437
+ +RN Q ++
Sbjct: 1584 MEQIKRNSQRVI 1595
>gi|110805372|ref|YP_688892.1| hypothetical protein SFV_1394 [Shigella flexneri 5 str. 8401]
gi|110614920|gb|ABF03587.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
Length = 640
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 520 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 578
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 579 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 633
>gi|331657880|ref|ZP_08358842.1| putative inner membrane protein [Escherichia coli TA206]
gi|331056128|gb|EGI28137.1| putative inner membrane protein [Escherichia coli TA206]
Length = 271
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 151 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 209
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 210 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 264
>gi|28422303|gb|AAH46881.1| Zgc:66156 protein [Danio rerio]
Length = 1622
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 86/295 (29%), Gaps = 10/295 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E + I + + + ++ E M
Sbjct: 1309 QAYTQQIEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1368
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ V
Sbjct: 1369 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEV 1428
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S EI
Sbjct: 1429 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTEIFKM 1487
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L ++ E + ++A T
Sbjct: 1488 KNSYEEALDQLETLKRENKNLQQEISDLTEQL------GETGKSIHELEKAKKTVESEKA 1541
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+I + L++ L ++ + ++ + D+ + +RN Q +
Sbjct: 1542 EIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEIEQIKRNSQRV 1596
>gi|115522076|ref|YP_778987.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
gi|115516023|gb|ABJ04007.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
Length = 566
Score = 42.2 bits (96), Expect = 0.16, Method: Composition-based stats.
Identities = 38/366 (10%), Positives = 100/366 (27%), Gaps = 12/366 (3%)
Query: 90 DTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
L S I +GL+ + K IA +R +
Sbjct: 202 GLLLGLSVALWIGIKGLSQSVNRLKHMMEKLAANDLAIAISGTERRDELGDMARTLDVFK 261
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ + + N E+ + + + I + + +
Sbjct: 262 TSA--LEVQKMRADQQATEKRNAEQRKSDMQKLASDFESAVGEIIETVSSSSTELEASAG 319
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ S + + + + ++Q V E + S N + + +D +
Sbjct: 320 TLTSTAERSQQLTSMVAAASEEASANVQSVASATEEMASSVNEISRQVQESARIANDAVD 379
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ + ++ + ++ T A N+ + + ++ +
Sbjct: 380 QAKNTNDRVGELSQAAGRIGAVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASE 439
Query: 330 STINTIENITSNLNDSSQKFAELMSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINR 388
E + SQ+ + + ++A+K+ ++ T E+
Sbjct: 440 VKALA-EQTAKATGEISQQINGIQAATQGSVAAIKQISATIGRMSEISSTIASAVEEQGA 498
Query: 389 YIPSIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GR 440
I N+Q +Q D+Q + + + R+ + G+
Sbjct: 499 ATQEISRNVQQAAQGTQQVSANITDVQRGASETGSASSQVLSAAQSLSRDSNRLKLEVGK 558
Query: 441 EKGSVK 446
+V+
Sbjct: 559 FLNTVR 564
>gi|238749525|ref|ZP_04611030.1| hypothetical protein yrohd0001_28430 [Yersinia rohdei ATCC 43380]
gi|238712180|gb|EEQ04393.1| hypothetical protein yrohd0001_28430 [Yersinia rohdei ATCC 43380]
Length = 817
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQ 104
+ +R+ G+ VG + + LD + + A I+ D L T + T
Sbjct: 5 TPIRYQGVEVGMVQSITLD-DDLRNIKVTASIKNDMEDSLREGTQFWLVTP 54
Score = 41.5 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 12/115 (10%), Positives = 22/115 (19%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G L I + +T + +
Sbjct: 696 AGSLQIGTPVLFRGLEVGTVTGFNLGAMSDR-VQVSLRISQKFQQLVRQNTVFWLASGYN 754
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ + P K +
Sbjct: 755 LEFGLTGGVVKSGTFQQFIRGGIAFATPPTTPLAPKATVNQHFLLNPAEPKDWRN 809
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 11/104 (10%), Positives = 28/104 (26%), Gaps = 1/104 (0%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQGL 106
+ L+ S V + IPVG++ + + + R + T +
Sbjct: 110 DLGSLNNGSLVYYRKIPVGKVYDYNIAPDNTGVVIDVLIDRRFAKLVKNDTRFWNVSGFK 169
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+ S + + A + + + +
Sbjct: 170 GDFSLSGASVQMESLAALVNGAIAFDSPQDSKNAQQDQPFQLYS 213
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH 80
L+ +R+ GI +G++ L L E
Sbjct: 582 DASKLAAGMPIRYLGINIGQVESLKLAPERNEV 614
>gi|90423303|ref|YP_531673.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB18]
gi|90105317|gb|ABD87354.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB18]
Length = 561
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 28/225 (12%), Positives = 68/225 (30%), Gaps = 10/225 (4%)
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ ++Q V E + S + + + +D E + + + +
Sbjct: 336 QASTNVQSVASATEEMASSVHEISRQVQESARIANDAVEQARKTNASVSDLTNAAARIGD 395
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
++ T A N+ + + ++ + E + SQ+ A
Sbjct: 396 VVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALA-EQTAKATGEISQQIA 454
Query: 351 ELMSKI-NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN--- 406
+ + +++A+KE T E+ I N+Q +
Sbjct: 455 GIQAATGESVTAIKEIGGTIAKMSEISSTIASAVEEQGAATQEISRNVQQAALGTQQVSS 514
Query: 407 ---DIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GREKGSVK 446
D+Q+ V + + + R+ + GR +V+
Sbjct: 515 NIVDVQHGVSETGSASSQVLSAAQSLSRDSNRLRLEVGRFLETVR 559
>gi|313649130|gb|EFS13564.1| uncharacterized yebT domain protein [Shigella flexneri 2a str.
2457T]
Length = 511
Score = 42.2 bits (96), Expect = 0.17, Method: Composition-based stats.
Identities = 11/115 (9%), Positives = 25/115 (21%), Gaps = 3/115 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGL 106
L + V F G+ VG + G+ L + + I + ++ + +
Sbjct: 391 AGSLGIGTPVLFRGLEVGTVTGMTL-GTLSDRVMIAMRISKRYQHLVRNNSVFWLASGYS 449
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ P + + K
Sbjct: 450 LDFGLTGGVVKTGTFNQFIRGGIAFATPPGTPLAPKAQEGKHFLLQESEPKEWRE 504
>gi|301758450|ref|XP_002915085.1| PREDICTED: LOW QUALITY PROTEIN: desmoplakin-like [Ailuropoda
melanoleuca]
Length = 3079
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 31/373 (8%), Positives = 110/373 (29%), Gaps = 10/373 (2%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ I + + + + + + ++ + IN
Sbjct: 1528 SLEEAAKTIQDKNKEIERLKAEFQEEAKRRWEYENELAKVRNSYDEEIISLKNQFETEIN 1587
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ + + + + + I+ + + + ++ + + LA + ++ T Q
Sbjct: 1588 ITKTTIHQLTLQKEEDTSGYRAQIDGLTRENRSLSEEVKRLKSTLAQTTETLRRVEETAQ 1647
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+ + ++ ++ + + Q L++ + K +++ +
Sbjct: 1648 QQKATGTEVSQRKQQLEIELRQVTQMRTEESVRYKQSLDDAAKTIQEKNKEIERLKQLID 1707
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ +E K+ + + + + + ++ +R
Sbjct: 1708 TEMSARKCLEEENAKLQRAQYELQKAHSGA--TEMIGKLKVQEQELTRLRLDYDRVSQER 1765
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK 385
I ++ +L QK E + SA + L ++ + + ++ + +
Sbjct: 1766 TLKDQDIARFQSSLKDLQLQKQKVEEXRRTASEDSAKR--KKLEEELEGMRRSLKEQAIR 1823
Query: 386 INRYIPSIGNN--LQNFSQSGLND----IQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
I + ++ S+ L + +R Q T + E + ++
Sbjct: 1824 ITSLTQQLEQASIVKKRSEDDLRQQRDVLDGHLRDKQRTQEELRRLSSEVEALRRQLLQE 1883
Query: 440 REKGSVKIYKPKH 452
+E + +H
Sbjct: 1884 QENLKQAHLRNEH 1896
>gi|313683028|ref|YP_004060766.1| methyl-accepting chemotaxis sensory transducer [Sulfuricurvum
kujiense DSM 16994]
gi|313155888|gb|ADR34566.1| methyl-accepting chemotaxis sensory transducer [Sulfuricurvum
kujiense DSM 16994]
Length = 634
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 31/274 (11%), Positives = 88/274 (32%), Gaps = 15/274 (5%)
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ K ++ + I+ + + + + + S+ + +
Sbjct: 225 FTRVIKQVSEGNFSDTHINASPGTELGIMADALQQLLMQIENFISQINISITNATVGDFS 284
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
I + S + +K + + + +V + + + D
Sbjct: 285 HPISDEGMHGAFVDAIGHVKESIDIMKDQELKKRRDAMNAQLSHLNIQVTESLSVIQHDL 344
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ +++ D+ + S I EI + K+ + S+++ + +
Sbjct: 345 HNNIQNL--KQVTSATEDAATLADGSRQTISEIISELGKLTEKVANNNEAISHISGRAAE 402
Query: 349 FAELMSKINNISALKENNSLFKDAQRA------------MHTFRDTSEKINRYIPSIGNN 396
++ I +I+ +L + A R +E+ ++ I +
Sbjct: 403 ITSIIEFITDIADQTNLLALNAAIEAARAGEHGRGFAVVADEVRKLAERTHKATGEISVS 462
Query: 397 LQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ + Q ++DIQ+ ++ V + +NNFE
Sbjct: 463 INSL-QQDMSDIQSSAEEMNSVVESSSEKINNFE 495
>gi|315180184|gb|ADT87098.1| Paraquat-inducible protein B [Vibrio furnissii NCTC 11218]
Length = 878
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 36/393 (9%), Positives = 102/393 (25%), Gaps = 6/393 (1%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
S GL D+ + + G+ VG + + L +++ + + + + +
Sbjct: 406 DSSFGLDKDAQILYRGVAVGSVTAVKLAEDHVEF-DVQIDKQYAALVRSQSRFYVTGAAT 464
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
A +T L+ K + + T + Y + +K S+ +Q
Sbjct: 465 AELTEAGLNVSIPPAKQLLTGSISFVSEGNATMQANYRLYQSQSLAEIAKYNQSGSQTLQ 524
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDK--MMHTTQVTPHSSDSKNTFNTITDLI 224
+ + + + N ++ +
Sbjct: 525 LFADELPPVSAGSPLLYRNLKVGTIANFKLTQSGVLIEAKIENQYKHLITPQTVFWNRSG 584
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
++ + + ++ + + + + + + Q Q+ G++I
Sbjct: 585 VEVNASLSGVSVKAAPLQTLIQGGIAFDNINGVENKQGKLWKLYPDYQHAQKYGEEILLT 644
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ + + + T M S + Q + L +
Sbjct: 645 ANGDTGITLGTPIKYNGVQVGEITDVMPDFGSPNVRFKARIQPAYAPYIAKAGSVFWLAE 704
Query: 345 SSQKFAELMSKINNISALKENNSLFKDAQR--AMHTFR-DTSEKINRYIPSIGNNLQNFS 401
+ + + N IS E + + + ++ +
Sbjct: 705 AKVGLQGIANLQNLISKSIEVKPGSGQTAKHFTLADMPYQEKGVVFSLQSETRGSVNVGT 764
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
DI+ + + D ++ E P
Sbjct: 765 PVLYRDIEVGRVTDVQLGSFADRVISTIEIEPN 797
Score = 40.7 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
++ + V + I VGR+ + L + + ++ I P+
Sbjct: 760 VNVGTPVLYRDIEVGRVTDVQL-GSFADRVISTIEIEPNY 798
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 27/89 (30%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + + I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMILAGWLVVKA-----IHDAGERIQIYFSD-AQGLVAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SPDLNSIYVEADVYPEATRLLSSETRFWL 111
>gi|302336581|ref|YP_003801787.1| methyl-accepting chemotaxis sensory transducer [Spirochaeta
smaragdinae DSM 11293]
gi|301633766|gb|ADK79193.1| methyl-accepting chemotaxis sensory transducer [Spirochaeta
smaragdinae DSM 11293]
Length = 625
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 41/421 (9%), Positives = 137/421 (32%), Gaps = 22/421 (5%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
+ F W S + S L+ S V +G++ + ++
Sbjct: 218 LSIMFLLGLFLWFSIKMITRPLKDYIQNFEAVSAGDLTVSSGVDSRD-EIGQLSD-YFNK 275
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRA 135
+ I T S + + + +E ++ ++
Sbjct: 276 FVSSLHGMILDIGKVTRNTRSISEDLASSSTETAAAVEEIRANSDQMKNQMHHLDK---- 331
Query: 136 MITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNIS 195
+ ++++++ ++ + + + I++ +T + A+IE +S + +
Sbjct: 332 -----------EVHSSKSSADEVRVFIQRVNEQIQSQASAITESSASIEEMSASINSIAH 380
Query: 196 HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVK 255
+ + + H+S+ ++ IT + + ++ + I ++ +
Sbjct: 381 SSAEKLKIAEELEHTSEQGSSEMGITREVMKKVAESADVMMEMIEVIDAIASQTNLLAMN 440
Query: 256 SSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSI 315
++ + + + E+ + + S+K SK +ENI+ + + +
Sbjct: 441 AAIEAAHAGEAGKGFGVVADEIRNLAESSSN--SAKEISKSLKEVIENISVTDKSTERTG 498
Query: 316 SAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA 375
+ +++ ++N ++N T L+ S + E + + + ++ + + +
Sbjct: 499 EMFDRMLQMIKEVSRSMNEMQNATQELSIGSGQIVEALGSL--VQITQDVQNSSGEMDQK 556
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ + E + ++ + L +I + + + + E
Sbjct: 557 VAAITSSLETLQNISAESTAGMEEMALGIL-EIAQAAQNVSNAGDQNSGSVRELEELVAR 615
Query: 436 I 436
Sbjct: 616 F 616
>gi|240172709|ref|ZP_04751368.1| MCE family lipoprotein LprK [Mycobacterium kansasii ATCC 12478]
Length = 389
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 37/336 (11%), Positives = 87/336 (25%), Gaps = 30/336 (8%)
Query: 29 SRSNQYDGPMA-EVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
DG V + +++G +S V + VG I + L+ + K I
Sbjct: 36 GGPGTGDGSYVLYVQVPDTLAING---NSKVMVADVTVGSIRDIRLE---NWIATLKLGI 89
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
L + TA I L G ++EL+ P
Sbjct: 90 DKGVKLPRNATAKIGQTSLLGSQHVELAA-----------------------PPDPSPQP 126
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + + + S ++ + + ++ L + + + H
Sbjct: 127 LCPPPHRKQDCTISLKNSSAYPNTEQTLASISMILRGGGIPNLEVLQNEVYNVFHGRADQ 186
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ +K T D ++ + + + +I D
Sbjct: 187 IRAFLTKLDTFTDQLNQQRDDITHAIDSTNRLLVYVGRRSDVLDRVLTDIPPLIKHFADT 246
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
R+ + ++ + + S+ + + R S I + +
Sbjct: 247 RDLLINAVDALGQLTQVTDQYLSEARGPLHTDLQALQCPLKELGRGSQYLIGALKLILTQ 306
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ + + S S ++N
Sbjct: 307 PYDIDTVPKLFRGDYQNVSATIDVTFSAMDNALLTG 342
>gi|326668722|ref|XP_001339206.4| PREDICTED: myosin heavy chain, fast skeletal muscle [Danio rerio]
Length = 1935
Score = 42.2 bits (96), Expect = 0.18, Method: Composition-based stats.
Identities = 37/377 (9%), Positives = 103/377 (27%), Gaps = 18/377 (4%)
Query: 78 PNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMI 137
S K + D A +T +E + K + + A
Sbjct: 1219 KEKSELKMEVD-DVSSSMEAVAKSKTNLEKMCRTLEDQLSEFKSKHDEHVRHINDLSAQK 1277
Query: 138 TATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHI 197
+ E +S +R Q + IE+ ++ +++ S
Sbjct: 1278 ARLQTENGEMGRQLEEKESLVSQLTRSKQAYTQQIEELKRQIEEEVKAKNSLAHAVQSSR 1337
Query: 198 DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSS 257
+ ++K S + Q E ++ + +
Sbjct: 1338 HDCDLLREQYEEEQEAKAELQRSMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRL 1397
Query: 258 DQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENIADSTSNMR 312
++ V + ++ Q++ + + D + + N + +
Sbjct: 1398 QDAEESIEAVNAKCASLEKTKQRLQNEVEDLMIDVERANALAANLDKKQRNFDKVLAEWK 1457
Query: 313 SSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSK--------INNISALK 363
+ + QK ++ + + ++ ++ L + + L
Sbjct: 1458 QKYEETQAELEGAQKEARSLSTELFKMKNSYEETLDHLETLKRENKNLQQEITDLTEQLG 1517
Query: 364 ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVN 420
E + ++ T +I + L++ L ++ + ++ +
Sbjct: 1518 ETGKTIHELEKGKKTAEIEKSEIQAALEEAEATLEHEESKILRVQLELNQVKGEIDRKLA 1577
Query: 421 HFDDCLNNFERNPQDIV 437
D+ + +RN Q I+
Sbjct: 1578 EKDEEIEQIKRNSQRII 1594
>gi|294507470|ref|YP_003571528.1| methyl-accepting chemotaxis protein [Salinibacter ruber M8]
gi|294343798|emb|CBH24576.1| methyl-accepting chemotaxis protein [Salinibacter ruber M8]
Length = 649
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 27/328 (8%), Positives = 104/328 (31%), Gaps = 19/328 (5%)
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
S + +++ ++ + ++ +E + +T+ + + ++ + I
Sbjct: 279 SFAGEAPTTPNENTEQAAEMTGQLRTKLEGAVASIRSTLQEVMSATSRANRSADEISTSS 338
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ ++ + A +Q V Q ++ + + +
Sbjct: 339 DQMAASAEEQSAQAEEVAAAVEELNQTINENARSVQSVAQSAQDGGREAREGQEVVSEAT 398
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREI 321
+ D+ Q + ++ + S +++ + A N+ + + ++ +
Sbjct: 399 GKMKDIAREVQGTADTIDRLQASSEEISQVVETIDEIANQTNLLALNAAIEAARAGGDGT 458
Query: 322 -TDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL------------KENNSL 368
++ Q + + + ++ + A+++ ++ + +E L
Sbjct: 459 GSETGQGFAVVAEEVRELADETDQATSEIADIIGEVQSEIDQAVEAAQQSSRNAEEGIEL 518
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL------NDIQNLVRKLQETVNHF 422
+ A A+ + E++ I + S + I ++ V
Sbjct: 519 SEKASEALRQIVASIEEVEAKADEIAAASEEQSTTSQEIARSVQSISTAAQESAAGVTEV 578
Query: 423 DDCLNNFERNPQDIVWGREKGSVKIYKP 450
D +R +++ + +++ +P
Sbjct: 579 SDIATTLDRVTENLETRLRQFALEQTRP 606
>gi|229523585|ref|ZP_04412990.1| paraquat-inducible protein B [Vibrio cholerae bv. albensis VL426]
gi|229337166|gb|EEO02183.1| paraquat-inducible protein B [Vibrio cholerae bv. albensis VL426]
Length = 879
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 19/164 (11%), Positives = 41/164 (25%), Gaps = 4/164 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ + V++ G+ +G + + D E A I P S A +Q
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY---ASKIAKQNSQFWLSQA 705
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
LS + + + Q + + + R +
Sbjct: 706 KFGLSGIENMQNLLGQSIEVQPGNGESRFEFELHKEARHGGAGNTYTLQSEKRGSVNVGT 765
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
I I+ A+ + ++ +
Sbjct: 766 PILYRDIEVGKVIDVRLGEFADRVITTIRIAPQYTYLLRQNSVF 809
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.3 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 38/128 (29%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV+ + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVN---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGLTGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
>gi|229494523|ref|ZP_04388286.1| MCE family protein [Rhodococcus erythropolis SK121]
gi|229318885|gb|EEN84743.1| MCE family protein [Rhodococcus erythropolis SK121]
Length = 354
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 41/284 (14%), Positives = 85/284 (29%), Gaps = 6/284 (2%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV-GRIVGLF 72
V I L DG V +++ G DGL + VR +G V GR+ L
Sbjct: 21 AVFAFGGCSAGIQDLPLGRSADGDAYNVALQLAG-ADGLVLGADVR-SGQKVIGRVSALS 78
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
D + + TPL + A++ G +I L +
Sbjct: 79 ADVVG---ADVTLSLDAATPLPDNVEASVELPSALGNPFIRLLLPEVPSGSTLSDGDTIP 135
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ T I ++++ + ET+++V+A
Sbjct: 136 ESRTEIGPQVESALATLGTVLTGSGIDQLDTVVRELNTAFSGRSGEVRSLTETLTSVMAE 195
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
SH + + S + D + +I + + +QI + +
Sbjct: 196 ASSHRSEFDEAVDLAARVSSQLAGQRVVVDNYLDSVPQVVSILVGQKDQIASLLNSTVQL 255
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
++ + ++ + + V +D S+ + +
Sbjct: 256 ATNANTILDSSPNGLDAMLHDASTVVGTLDSFNSEIGQTLTNMN 299
>gi|148223878|ref|NP_001084034.1| myosin, heavy chain 10, non-muscle [Xenopus laevis]
gi|214624|gb|AAA49915.1| nonmuscle myosin heavy chain b [Xenopus laevis]
Length = 1992
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 21/208 (10%), Positives = 66/208 (31%), Gaps = 7/208 (3%)
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
K + + + + + L+ + + K+ ++ D ++ Q +++ L
Sbjct: 1044 KNKQEMMISDLEERLKKEEKTRQELEKAKRKLDGETTDFQDQIAELQAQIEEL-KLQLAK 1102
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + E + + ++ +I + ++ + S + D S++
Sbjct: 1103 KEEELQAALARGDEEVLQKNNTLKLVRELQAQIAELQEDLESEKASRNKAEKQKRDLSEE 1162
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
L +++ + + + ++ + I N + Q
Sbjct: 1163 LEALKTELEDTLDTTAAQQELRTKRE------QEVAELRKSIEEETRNHEAQIQEMRQRQ 1216
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +L E + N E+N Q +
Sbjct: 1217 ATALEELSEQLEQAKRFKVNLEKNKQSL 1244
>gi|159119648|ref|XP_001710042.1| Coiled-coil protein [Giardia lamblia ATCC 50803]
gi|157438160|gb|EDO82368.1| Coiled-coil protein [Giardia lamblia ATCC 50803]
Length = 1839
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 23/232 (9%), Positives = 67/232 (28%), Gaps = 10/232 (4%)
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
++ D + +D + N ++ + + ++S T
Sbjct: 1291 KLPITQYLPVMPFDHCSRTVAYGSNLDSKFFNMLVNAADIWVSTDYRASLIKEATRDKAG 1350
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ T + I + + + + T + + + + ++I
Sbjct: 1351 KITAKLSHMKATIASAIQQLDQQNSGGDQENSKMEVEFDTDHEHALVETQERYQTRIEQI 1410
Query: 329 ISTINTIENITSNLNDSSQKF-AELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
I +E + N + + + L + +I +E + + ++ +
Sbjct: 1411 RKDIADLEQMLKNEAERYESSRSSLQKRFESIINYEETMRM-----ATVANLNAQIDQQD 1465
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
+ + I L I + R+ + V + E+N + G
Sbjct: 1466 QALSKIEAAYNEE----LRQIDDERREALKAVEQIGETAVEREKNASATLRG 1513
>gi|239937539|ref|NP_001155229.1| myosin heavy chain [Oryzias latipes]
gi|239735376|dbj|BAH70478.1| myosin heavy chain larval type 1 [Oryzias latipes]
Length = 1933
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 90/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F + ++I + + + ++ E M
Sbjct: 1304 QAFTQQIDELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1363
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ + V
Sbjct: 1364 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLHSEV 1423
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1424 EDLMIDVERANALAGNLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1482
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A
Sbjct: 1483 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKQVETEKS 1536
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1537 EIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKIAEKDEEIEQIKRNSQRVI 1592
>gi|121587225|ref|ZP_01676999.1| paraquat-inducible protein B [Vibrio cholerae 2740-80]
gi|121548568|gb|EAX58622.1| paraquat-inducible protein B [Vibrio cholerae 2740-80]
Length = 618
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 145 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 194
Score = 41.1 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 487 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 542
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 543 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 602
Query: 154 TSKKISDS 161
+++
Sbjct: 603 QAQEEWTK 610
Score = 40.3 bits (91), Expect = 0.57, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 389 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 428
>gi|116062143|dbj|BAF34702.1| fast skeletal myosin heavy chain isoform mMYH-2 [Oryzias latipes]
Length = 1935
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 90/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E +++ + + + ++ E M
Sbjct: 1309 QAFTQQIEELKRQVEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1368
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1369 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1428
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1429 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1487
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A +
Sbjct: 1488 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKSVETEKS 1541
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1542 EIQTALEEAEGTLEHEEAKILRVQLELNQVKGEIDRKLAEKDEEMEQIKRNSQRVI 1597
>gi|315633938|ref|ZP_07889227.1| paraquat-inducible protein B [Aggregatibacter segnis ATCC 33393]
gi|315477188|gb|EFU67931.1| paraquat-inducible protein B [Aggregatibacter segnis ATCC 33393]
Length = 880
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 9/111 (8%), Positives = 29/111 (26%), Gaps = 1/111 (0%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATI 101
+ ++T S + + G+ VG I L L+ + + ++ I
Sbjct: 751 VLETTDALNITTGSPIMYRGVEVGTIKNLELNSLGDRVLIHIVIASKYQHLVRKNSEFWI 810
Query: 102 RTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ ++ + + + + + +
Sbjct: 811 ASGYDFNLSLSGAQFNTGSVQQLLKGGISFSTPSGTVVQEPAKANQRFLLQ 861
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 12/103 (11%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + F+ + F V I + +GL D + +R+
Sbjct: 20 NRRISPFWLLPFIALCIGAILFF-------QIIQEQGVSVRITF-ANGEGLVADKTQIRY 71
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATI 101
G+ +G + + + A I P+ L +T +
Sbjct: 72 QGLQIGVVKKVNFT-DNLQKVDVVANIYPEAKSILRENTKFWL 113
>gi|115523331|ref|YP_780242.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
gi|115517278|gb|ABJ05262.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
Length = 567
Score = 42.2 bits (96), Expect = 0.19, Method: Composition-based stats.
Identities = 21/203 (10%), Positives = 56/203 (27%), Gaps = 8/203 (3%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
E + S N + ++ + + +++ S ++ T A
Sbjct: 352 SATEEMSSSVNEISRQVQDSARIANEAVDQARKTNGRVEELSRAASRIGDVVELINTIAG 411
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-NNI 359
N+ + + ++ + E + Q+ + + +++
Sbjct: 412 QTNLLALNATIEAARAGEAGRGFAVVASEVKALA-EQTAKATGEIGQQIDGIQAATRDSV 470
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------DIQNLVR 413
SA+KE + T E+ I N+Q + D+Q+
Sbjct: 471 SAIKEISDTIGKMSEIASTIASAVEEQGAATQEISRNVQQAAAGTQQVSANIADVQHGAS 530
Query: 414 KLQETVNHFDDCLNNFERNPQDI 436
+ + R+ +
Sbjct: 531 ETGSASSQVLSAAQTLSRDSNRL 553
>gi|86751383|ref|YP_487879.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
gi|86574411|gb|ABD08968.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
Length = 563
Score = 41.8 bits (95), Expect = 0.19, Method: Composition-based stats.
Identities = 28/271 (10%), Positives = 77/271 (28%), Gaps = 8/271 (2%)
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ T+ + + + + H + + + + + + S
Sbjct: 280 AQRKADTVRLADEFERAIGEIVETVSSASHELEASATTLTTTAERSQHLATMVSSASEEA 339
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ ++Q V E + S N + + H+ E +T +++ + +
Sbjct: 340 STNVQSVASATEEMSSSVNEISRQVQESARIAHEAVEQARTTNGRVEELAKAAARIGDVV 399
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ T A N+ + + ++ + E + SQ+ +
Sbjct: 400 ELINTIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALA-EQTAKATGEISQQINGI 458
Query: 353 MSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS------QSGL 405
+ ++A+KE T E+ I N+Q + +
Sbjct: 459 QVATDQSVTAIKEIGGTIGRMSEISSTIASAVEEQGAATQEISRNVQQAAIGTQQVSVNI 518
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
D+Q + + + R+ +
Sbjct: 519 TDVQRGATETGSASSQVLSAAKSLSRDSNRL 549
>gi|325523697|gb|EGD01963.1| putative methyl-accepting chemotaxis protein [Burkholderia sp.
TJI49]
Length = 620
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 51/410 (12%), Positives = 128/410 (31%), Gaps = 17/410 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
WL+R G EV + +V G + +S V +G+P+G + L + +A
Sbjct: 138 WLTRF-LSSGMPYEVHMDHEVTVGGYMMFINSRVELDGVPIGA-ACMSLSVDALAKGIA- 194
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + A + + I ++L K + + + + +
Sbjct: 195 -----AYRIGETGFAYLV-RPDGAIMMHRDTSLIDGKHFMKDRPGLPDDASSVLLSGKPY 248
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
Y + E ++ I+ S +E P + + A + + +
Sbjct: 249 AYMSYDGEGGARFIATSFVPELNAYVVVEVPQAELLGPVTRAIHGAALVAAVVGLGVALV 308
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ L++ + + + + + I S+ F + + V
Sbjct: 309 VIWFVGRAIAAPIRRAAMLLSEIASGHGDLTRRMTVESEDEIGQLSDAFNRFVSSLSTLV 368
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMK--SKETSAFLENIADSTSNMRSSISAIREIT 322
H +R + + +I +D S++ + S ++ + T+ +R++
Sbjct: 369 HRIRAASASIATGSAQIASGNADLSARTEGQSSNLERTASSMEEITAVVRNNTETATTAA 428
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT 382
+ + + ++ ++ +I+ I + ++ S +
Sbjct: 429 TMINGASDAAARGGQVVGEVVSTMEQISDASQRISEIIVMIDSISFQTNILALNAAVEAA 488
Query: 383 ----SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + S NL S +I+ L+ TVN +
Sbjct: 489 RAGEQGRGFAVVASEVRNLAQRSAQAAKEIKALIEHSAGTVNVGSRLVAE 538
>gi|260768467|ref|ZP_05877401.1| paraquat-inducible protein B [Vibrio furnissii CIP 102972]
gi|260616497|gb|EEX41682.1| paraquat-inducible protein B [Vibrio furnissii CIP 102972]
Length = 878
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
S GL D+ + + G+ VG + + L +++ + D + A +R+Q
Sbjct: 406 DSSFGLDKDAQILYRGVAVGSVTAVKLAEDH---------VEFDVQIDKQYAALVRSQS 455
Score = 40.7 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G++ + +++NG+ VG I + D PN KA I+P
Sbjct: 649 TGITLGTPIKYNGVQVGEITDVMPDFGSPN-VRFKARIQPAY 689
Score = 40.7 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 8/40 (20%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
++ + V + I VGR+ + L + + ++ I P+
Sbjct: 760 VNVGTPVLYRDIEVGRVTDVQL-GSFADRVISTIEIEPNY 798
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 27/89 (30%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + + I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMILAGWLVVKA-----IHDAGERIQIYFSD-AQGLVAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SPDLNSIYVEADVYPEATRLLSSETRFWL 111
>gi|116062139|dbj|BAF34700.1| fast skeletal myosin heavy chain isoform mMYH-5 [Oryzias latipes]
Length = 1936
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 89/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1308 QAFTQQIEELKRLVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1428 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A +
Sbjct: 1487 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKSVETEKS 1540
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ L +RN Q ++
Sbjct: 1541 EIQTALEEAEGTLEHEEAKILRVQLELNQVKGEIDRKLAEKDEELEQIKRNSQRVI 1596
>gi|239937541|ref|NP_001155230.1| myosin heavy chain larval type 2 [Oryzias latipes]
gi|239735378|dbj|BAH70479.1| myosin heavy chain larval type 2 [Oryzias latipes]
Length = 1933
Score = 41.8 bits (95), Expect = 0.20, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 90/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F + ++I + + + ++ E M
Sbjct: 1304 QAFTQQIDELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1363
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ + V
Sbjct: 1364 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLHSEV 1423
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1424 EDLMIDVERANALAGNLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1482
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A
Sbjct: 1483 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKQVETEKS 1536
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1537 EIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKIAEKDEEIEQIKRNSQRVI 1592
>gi|11498639|ref|NP_069867.1| methyl-accepting chemotaxis protein (tlpC-1) [Archaeoglobus
fulgidus DSM 4304]
gi|2649560|gb|AAB90209.1| methyl-accepting chemotaxis protein (tlpC-1) [Archaeoglobus
fulgidus DSM 4304]
Length = 677
Score = 41.8 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 32/404 (7%), Positives = 113/404 (27%), Gaps = 22/404 (5%)
Query: 56 SSVRFNGIPVGRI---VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
+ V+ NG VG + V + ++ + + + A +
Sbjct: 136 APVKVNGELVGMVGFYVDVTPIKQKEEEAKKAYELVKEVFKNMPFPAYVLFVNRDHKIQY 195
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
+ K + + T G + I+ + K +
Sbjct: 196 ANDEIAKLAGYSSAEEIIGLPPSELFKTEGGRTVADKVLDTGKAVINHQAVTRTKDGREV 255
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD------LITS 226
++ ++ + + + I ++ + + +
Sbjct: 256 PVLVSCIPVYVDGEMVGVIDLFTDITELREKEKEIEEMLAYTGRCLNMLSNGIRELQAGN 315
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
LD ++ I + + E + + ++ + + + + E +++ +
Sbjct: 316 LDVRLEKIRDDEFGETFEAFNEFAGRMQEIVRKLADDMKETANQVREAAEAVNQMNAGMQ 375
Query: 287 DFSSKMK-----SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
SS + S+ S + D+ + + I
Sbjct: 376 QISSASQQIATGSENLSRLANASTLDLKAAEEIFRELAAKADESNRQVEAAAERSRIAEQ 435
Query: 342 L-NDSSQKFAELMSKINNISALKEN-NSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + ++ ++ N S + E ++ + + +++ N +
Sbjct: 436 EGGRALEIIKSIVQEVENASKVVETLEQAVRNIGKVTERIKSIADQTNLLALNAAIEAAR 495
Query: 400 FSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ G ++++ L + +++ D+ + N + + ++
Sbjct: 496 AGEHGRGFAVVADEVRKLAEESRKSTEEIDEIVRNVQEETRKVI 539
>gi|262190062|ref|ZP_06048358.1| paraquat-inducible protein B [Vibrio cholerae CT 5369-93]
gi|262034053|gb|EEY52497.1| paraquat-inducible protein B [Vibrio cholerae CT 5369-93]
Length = 879
Score = 41.8 bits (95), Expect = 0.21, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L ++ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GDFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|148261688|ref|YP_001235815.1| methyl-accepting chemotaxis sensory transducer [Acidiphilium
cryptum JF-5]
gi|146403369|gb|ABQ31896.1| methyl-accepting chemotaxis sensory transducer [Acidiphilium
cryptum JF-5]
Length = 509
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 47/417 (11%), Positives = 115/417 (27%), Gaps = 17/417 (4%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIP--VGR 67
GL VV +SI + + I S V G + + VRF G VGR
Sbjct: 43 GLPVVVGAVTLLWSIVGGYVTWRVITDPFTATIERMESMVAG-NYGAPVRFTGYRDCVGR 101
Query: 68 IVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + + LA+ + A R++ L + +++
Sbjct: 102 LTRV---IDRFREAELARQRAEGEVRAMADREAE-RSRAERLREAEVRERLDRMIRSLGG 157
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ D + ++I + I +
Sbjct: 158 ALERLAAGVLTERLMEPFAPEFETLRTDFNAAMDRLQEAMRLIATNAAAIGAGTGQISSG 217
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ L+ + T + + D ++ ++
Sbjct: 218 ADDLSRRTEQQAATLEETVAALDEITATVRKTAEAAIHARNVVGTATQDAERGGAVVSQA 277
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ SS Q+ N + + E + L + + + F ++
Sbjct: 278 VQAMGEIEASSKQIGNIIGVIDEIA-----FQTNLLALNAGVEAARAGEAGRGFAVVASE 332
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+ + S A +EI + ++ + ++ + +IN + E
Sbjct: 333 VRALAQRSADAAKEIKTLISTSNQQVVAGVDLVGQTGRALERIVAQIGEINGVVG--EIA 390
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ ++ + ++++ +Q + + N +Q +L + F
Sbjct: 391 ASAQEQSTGLVQVNAAVGQMDQTTQQNAAMVQQSTAASHNLLQET-NELAAMIGRFQ 446
>gi|154507624|ref|ZP_02043266.1| hypothetical protein ACTODO_00105 [Actinomyces odontolyticus ATCC
17982]
gi|153797258|gb|EDN79678.1| hypothetical protein ACTODO_00105 [Actinomyces odontolyticus ATCC
17982]
Length = 734
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 45/460 (9%), Positives = 126/460 (27%), Gaps = 38/460 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRF 60
+ + + + VV L W + + + G + I I + G V
Sbjct: 13 RRAHRSLIASVVVFGLVVIPSLFTWFNVAASWDPFGNTKSLRIAIANTDAG-YKSDLVPL 71
Query: 61 NGIPVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ + +G + L + + ++ T A + +
Sbjct: 72 H-VNIGDSVVSALRKNDNFDWVIASEDEAVEGTRSGEYYAAIVIPSDFSREMLTFFDGGA 130
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + ++N + A + + +S+ + + + T
Sbjct: 131 SSAPMTYYVNEKKNGISPKIAGQGAEAVSAQVNQIFVQTLSEVALDTATSVGSALSSPTA 190
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + ++ + + T+ D +L + +
Sbjct: 191 VNTVTALDN----RVQTVASRLRTAADSADAYASLVGSSVTLIDSTATLVDGLGSAKGPA 246
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS-SKMKSKET 297
+ + +S +S V + + + + + ++ + ++ S S + T
Sbjct: 247 QSAVSSAQAGASGLGSAASAAVSSVSDAISSSQSSLSSLSSAVESVYANGSTSASDAAST 306
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
++ D+ + +SI S+++ ++ + L + + S+++
Sbjct: 307 LRSQASVLDTQATSFASIKTTLGALPGSPVSQSSLDRLQAASDRLTEVANGLRAAASELD 366
Query: 358 NISALKEN-----NSLFKDAQRAMH--------TFRDTSEKINRY--------------I 390
+ A E N L A+ A+ R E + +
Sbjct: 367 SKVANAEAGHATVNGLIAQARSAVDGLSSDYENNLRPQLESLAATLASAQSSLSAARTSL 426
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ N S S + L L + +
Sbjct: 427 EGATSTASNGSGSAREGLTQLRDNLMGAATSLREAAGKLD 466
>gi|316934597|ref|YP_004109579.1| Pas/Pac sensor containing methyl-accepting chemotaxis sensory
transducer [Rhodopseudomonas palustris DX-1]
gi|315602311|gb|ADU44846.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Rhodopseudomonas palustris DX-1]
Length = 716
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 25/294 (8%), Positives = 78/294 (26%), Gaps = 13/294 (4%)
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ + ++ + S + I + + S+ +
Sbjct: 411 QAMQNKLFFNREEEKDTAKRAAHQRKLDMQRIASEFESAVGEVIQTVSSASTELEASATT 470
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
++ +T+ V + + +++ + S QV + RE
Sbjct: 471 LSSSAQRAQEVTTSVAAASEQATTNVQSVASASEEMTSSVNEISRQVQESARIAREAVVQ 530
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
+++ L ++ + ++ D +
Sbjct: 531 AHTTNERVGDL--STAAARIGDVVELINTIAGQTNLLALNATIEAARAGDAGRGFAVVAA 588
Query: 334 TIENITSNLNDSSQKFAELMSKIN-----NISALKENNSLFKDAQRAMHTFRDTSEKINR 388
++ + ++ + ++ + I +++A++E + T E+
Sbjct: 589 EVKALAEQTAKATGEISQQIGSIQTATGQSVTAIQEIGATISRMSEIAATIASAVEEQGA 648
Query: 389 YIPSIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
I N+Q +Q D+Q + N + R+ +
Sbjct: 649 ATQEISRNVQQAAQGTQEVSASIVDVQRGATETGAASNQVLSAAQSLARDSNRL 702
>gi|153824849|ref|ZP_01977516.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
gi|149741567|gb|EDM55597.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
Length = 879
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMILAGWLVFKA-----VHDAGVRIQIHF-ENAQGLIAGRTTIRYQGLEVGMVRDIKL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+E + A L T +
Sbjct: 83 SEELDSIYVEADIYPEATKLLSNQTRFWM 111
>gi|153801151|ref|ZP_01955737.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
gi|124123271|gb|EAY42014.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
Length = 879
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|153214790|ref|ZP_01949619.1| conserved hypothetical protein [Vibrio cholerae 1587]
gi|124115132|gb|EAY33952.1| conserved hypothetical protein [Vibrio cholerae 1587]
Length = 879
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|327484131|gb|AEA78538.1| Paraquat-inducible protein B [Vibrio cholerae LMA3894-4]
Length = 879
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|326405181|ref|YP_004285263.1| methyl-accepting chemotaxis protein [Acidiphilium multivorum
AIU301]
gi|325052043|dbj|BAJ82381.1| methyl-accepting chemotaxis protein [Acidiphilium multivorum
AIU301]
Length = 509
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 47/417 (11%), Positives = 115/417 (27%), Gaps = 17/417 (4%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGS-VDGLSTDSSVRFNGIP--VGR 67
GL VV +SI + + I S V G + + VRF G VGR
Sbjct: 43 GLPVVVGAVTLLWSIVGGYVTWRVITDPFTATIERMESMVAG-NYGAPVRFTGYRDCVGR 101
Query: 68 IVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + + LA+ + A R++ L + +++
Sbjct: 102 LTRV---IDRFREAELARQRAEGEVRAMADREAE-RSRAERLREAEVRERLDRMIRSLGG 157
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ D + ++I + I +
Sbjct: 158 ALERLAAGVLTERLMEPFAPEFETLRTDFNAAMDRLQEAMRLIATNAAAIGAGTGQISSG 217
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ L+ + T + + D ++ ++
Sbjct: 218 ADDLSRRTEQQAATLEETVAALDEITATVRKTAEAAIHARNVVGTATQDAERGGAVVSQA 277
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ SS Q+ N + + E + L + + + F ++
Sbjct: 278 VQAMGEIEASSRQIGNIIGVIDEIA-----FQTNLLALNAGVEAARAGEAGRGFAVVASE 332
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+ + S A +EI + ++ + ++ + +IN + E
Sbjct: 333 VRALAQRSADAAKEIKTLISTSNQQVVAGVDLVGQTGRALERIVAQIGEINGVVG--EIA 390
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFD 423
+ ++ + ++++ +Q + + N +Q +L + F
Sbjct: 391 ASAQEQSTGLVQVNAAVGQMDQTTQQNAAMVQQSTAASHNLLQET-NELAAMIGRFQ 446
>gi|297579071|ref|ZP_06940999.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|297536665|gb|EFH75498.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 879
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.7 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWSK 871
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
Score = 37.2 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMILAGWLVFKA-----VHDAGVRIQIHF-ENAQGLIAGRTTIRYQGLEVGMVRDIRL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SEGLDSIYVEADIYPEATKLLSNQTRFWM 111
>gi|229514908|ref|ZP_04404368.1| paraquat-inducible protein B [Vibrio cholerae TMA 21]
gi|229347613|gb|EEO12572.1| paraquat-inducible protein B [Vibrio cholerae TMA 21]
Length = 879
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
Score = 37.2 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMILAGWLVFKA-----VHDAGVRIQIHF-ENAQGLIAGRTTIRYQGLEVGMVRDIRL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SEGLDSIYVEADIYPEATKLLSNQTRFWM 111
>gi|153830898|ref|ZP_01983565.1| conserved hypothetical protein [Vibrio cholerae 623-39]
gi|148873613|gb|EDL71748.1| conserved hypothetical protein [Vibrio cholerae 623-39]
Length = 879
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
Score = 37.2 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 29/89 (32%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ + I + GL +++R+ G+ VG + + L
Sbjct: 29 IVTMILAGWLVFKA-----VHDAGVRIQIHF-ENAQGLIAGRTTIRYQGLEVGMVRDIRL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ + A L T +
Sbjct: 83 SEGLDSIYVEADIYPEATKLLSNQTRFWM 111
>gi|15641510|ref|NP_231142.1| hypothetical protein VC1501 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121726906|ref|ZP_01680107.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|147674478|ref|YP_001217055.1| hypothetical protein VC0395_A1109 [Vibrio cholerae O395]
gi|153820279|ref|ZP_01972946.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|227081660|ref|YP_002810211.1| hypothetical protein VCM66_1444 [Vibrio cholerae M66-2]
gi|229508550|ref|ZP_04398053.1| paraquat-inducible protein B [Vibrio cholerae BX 330286]
gi|229511379|ref|ZP_04400858.1| paraquat-inducible protein B [Vibrio cholerae B33]
gi|229518518|ref|ZP_04407961.1| paraquat-inducible protein B [Vibrio cholerae RC9]
gi|229607955|ref|YP_002878603.1| paraquat-inducible protein B [Vibrio cholerae MJ-1236]
gi|254848623|ref|ZP_05237973.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255745057|ref|ZP_05419007.1| paraquat-inducible protein B [Vibrio cholera CIRS 101]
gi|262161656|ref|ZP_06030674.1| paraquat-inducible protein B [Vibrio cholerae INDRE 91/1]
gi|262169534|ref|ZP_06037225.1| paraquat-inducible protein B [Vibrio cholerae RC27]
gi|298498411|ref|ZP_07008218.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656004|gb|AAF94656.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121630668|gb|EAX63055.1| conserved hypothetical protein [Vibrio cholerae V52]
gi|126509178|gb|EAZ71772.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
gi|146316361|gb|ABQ20900.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|227009548|gb|ACP05760.1| conserved hypothetical protein [Vibrio cholerae M66-2]
gi|227013416|gb|ACP09626.1| conserved hypothetical protein [Vibrio cholerae O395]
gi|229343207|gb|EEO08182.1| paraquat-inducible protein B [Vibrio cholerae RC9]
gi|229351344|gb|EEO16285.1| paraquat-inducible protein B [Vibrio cholerae B33]
gi|229354504|gb|EEO19427.1| paraquat-inducible protein B [Vibrio cholerae BX 330286]
gi|229370610|gb|ACQ61033.1| paraquat-inducible protein B [Vibrio cholerae MJ-1236]
gi|254844328|gb|EET22742.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737528|gb|EET92923.1| paraquat-inducible protein B [Vibrio cholera CIRS 101]
gi|262021768|gb|EEY40478.1| paraquat-inducible protein B [Vibrio cholerae RC27]
gi|262028388|gb|EEY47043.1| paraquat-inducible protein B [Vibrio cholerae INDRE 91/1]
gi|297542744|gb|EFH78794.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 879
Score = 41.8 bits (95), Expect = 0.22, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|326678008|ref|XP_002667379.2| PREDICTED: myosin heavy chain, fast skeletal muscle [Danio rerio]
Length = 1934
Score = 41.8 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 42/372 (11%), Positives = 110/372 (29%), Gaps = 13/372 (3%)
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
L + AKA + + I+T+ I + ++ + R
Sbjct: 1230 DLSSNMEAVAKAKANLEKMCRTLEDQLSEIKTKSDENIRQLNDMNAQRARLQTENGEFSR 1289
Query: 132 N---QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ A+++ G + E + + + + + ++ E
Sbjct: 1290 QLEEKEALVSQLTRGKQAYTQQIEELKRHVEEEVKAKNALAHAVQSARHDCDLLREQFEE 1349
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
M T K A LQ + +E +
Sbjct: 1350 EQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNS 1409
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ K+ ++ V D+ + + +D +F ++ + E A+
Sbjct: 1410 KCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELE 1468
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + S EI + ++ +E + + Q+ ++L ++ E
Sbjct: 1469 GAQKEARSLSTEIFKMKNSYEEALDQLETLKRENKNLQQEISDLTEQL------GETGKS 1522
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDC 425
+ ++A T +I + L++ L ++ + ++ + D+
Sbjct: 1523 IHELEKAKKTVESEKVEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEE 1582
Query: 426 LNNFERNPQDIV 437
+ +RN Q ++
Sbjct: 1583 IEQIKRNSQRVL 1594
>gi|229520537|ref|ZP_04409961.1| paraquat-inducible protein B [Vibrio cholerae TM 11079-80]
gi|229342361|gb|EEO07355.1| paraquat-inducible protein B [Vibrio cholerae TM 11079-80]
Length = 879
Score = 41.8 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 41.5 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 14/128 (10%), Positives = 36/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + P+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLMPAAPEGHTFYLYP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEEWTK 871
Score = 40.3 bits (91), Expect = 0.68, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|229529457|ref|ZP_04418847.1| paraquat-inducible protein B [Vibrio cholerae 12129(1)]
gi|229333231|gb|EEN98717.1| paraquat-inducible protein B [Vibrio cholerae 12129(1)]
Length = 879
Score = 41.8 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 41.5 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 748 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 803
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 804 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLHP 863
Query: 154 TSKKISDS 161
+++
Sbjct: 864 QAQEQWTK 871
Score = 40.7 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GIKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|145553100|ref|XP_001462225.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430063|emb|CAK94852.1| unnamed protein product [Paramecium tetraurelia]
Length = 739
Score = 41.8 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 27/348 (7%), Positives = 107/348 (30%), Gaps = 8/348 (2%)
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ D + + + ++ + L+ ++ + +I + M+
Sbjct: 1 MAVELDRMIQENNLLKEEVKEVSNLRVDRLNYEKQIGDLMNKIQQLLAENDMLKR---DN 57
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ + + +I +Q + I+ + +++ +
Sbjct: 58 DKLKTLLNQANSRIQQLEGQVQDFQQEIQTVSNKLEDITGGDGDFDIEALKQKAELLDSL 117
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
S + + + + + + + K + +
Sbjct: 118 AKDGQSMEDLSDLLDSLREKAEKYDHHLELLNGRDLEDILSDLDELEKLRKLVKDLQAKL 177
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+++ ++ +++D + +KE + D + A++EI
Sbjct: 178 SDMQKELDALKKKSKELDDMKKKLGD-DPNKEVDKLRKQQKDQEDLKKKLADALKEIEQL 236
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
++ + + + +Q +I + + +++ Q ++ +
Sbjct: 237 KKLLNDKTAECNRLGQQVAQLTQDNQAKDQRIQELERYAQQ---YQELQIRVNKLEQELD 293
Query: 385 KINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
+ R + L++ ++ ++++ +++L+ + D + N ER
Sbjct: 294 NLQRQLKDKNQQLEDKTR-LIDNLNREIQQLKAELQRLKDQIANLERE 340
>gi|115523900|ref|YP_780811.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
gi|115517847|gb|ABJ05831.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
Length = 561
Score = 41.8 bits (95), Expect = 0.23, Method: Composition-based stats.
Identities = 26/326 (7%), Positives = 80/326 (24%), Gaps = 8/326 (2%)
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ K ++ + Q + ++
Sbjct: 234 EIAGTDRGDEIGQTANAVNGIKLMLDEKTKQEAEQKAQADRRLAVERKAEMQKLADSFER 293
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ + + + + + + + + + ++Q V E +
Sbjct: 294 AVGEIVHTVSSASTELEASASTLTTTSARSQERTTAVAAASEQATANVQSVASATEEMSS 353
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
S + + + Q + ++ + ++ T A N+
Sbjct: 354 SITEISRQVQDSARIAGEAVQQAQKTNDRVGELAKAAARIGDVVELINTIAGQTNLLALN 413
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + ++ + + + Q + ++ A+KE
Sbjct: 414 ATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQITGIQAATQESVGAIKEIGDT 473
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------DIQNLVRKLQETVNHF 422
T E+ I N+Q +Q D+Q+ V + +
Sbjct: 474 IAKMSEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSSNIIDVQHGVSETGSASSQV 533
Query: 423 DDCLNNFERNPQDIV--WGREKGSVK 446
+ R+ + G+ +V+
Sbjct: 534 LSAAQSLSRDSNRLKDEVGKFLDTVR 559
>gi|257876311|ref|ZP_05655964.1| phage infection protein [Enterococcus casseliflavus EC20]
gi|257810477|gb|EEV39297.1| phage infection protein [Enterococcus casseliflavus EC20]
Length = 901
Score = 41.8 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 47/454 (10%), Positives = 117/454 (25%), Gaps = 45/454 (9%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDG-------LSTDSSV-- 58
+ F++ L W + +D G +E+ I + + G + V
Sbjct: 23 ISAFLIIALMILPSLYAWFNIKALWDPYGNTSELPIAVYSADKGAEFQDKHIDIGDEVID 82
Query: 59 ------------------RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
G+ G+ ++ L T+
Sbjct: 83 TLHKNKQLGWRFLDSKEDLIEGVKSGK-----------YYAGIYLPADFSDDLISFTSGK 131
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
I + Y K + A+ + + + I I
Sbjct: 132 IEKPTIEY--YSNQKINAIAPKITDKGASSLQEEISQNFIETASSTLIKVFNEIGYDIDS 189
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ I K+ I ++ + + + +
Sbjct: 190 NLVSINKVKSMILDTDDNLATIDGYTKEIVTLHDKFPEIKEKIAKAEEFTDYIPQVDAMG 249
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
LI DK+ + L+ N K + + D+ T + ++
Sbjct: 250 EKLIGLNDKLPALKKEASIILTLQEKIPEIQNAGKQLKMIDDDFDDIASTMTDGIDTAKQ 309
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
++ + + E + + +T+ + + + TI +I + +
Sbjct: 310 GLQVIEQVQAALPQIE-QLGDQAASFATATKDGAQQLQDALPSISSSVKVTIESISQVAT 368
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + ++ +N +E ++ + ++ I + N +
Sbjct: 369 TTAGLTSTIRQALA--DNELTDEERQAISATITDFQKNIQQQQAALDSLIAFLTNIQNSG 426
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
S + L I + + T+ D L+ Q
Sbjct: 427 SNADLEGIIAQLSNAKTTLGVLSDRLSQLNNLVQ 460
>gi|312881595|ref|ZP_07741373.1| mce-related protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370658|gb|EFP98132.1| mce-related protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 879
Score = 41.8 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 12/79 (15%), Positives = 27/79 (34%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ S + + G+ VG + G+ L ++ A + + + + A I
Sbjct: 409 GIEKGSEILYRGLNVGSVTGVKLTEQDKVQVDAIVYNQYTNLIKSKNRFYLTSSFRAKIE 468
Query: 111 YIELSTLRKEKKTIFQIAT 129
L+ K + +
Sbjct: 469 ESGLTVSMPPAKQLLSGSI 487
Score = 40.7 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 17/128 (13%), Positives = 35/128 (27%), Gaps = 6/128 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP--DTP 92
G + GSV + V + I VG + + L E+ + L I+P
Sbjct: 746 FGIEFTLQSATKGSVT---VGTPVLYREIEVGEVTDVSL-GEFADRVLTTISIKPKFSYL 801
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
+ ++ + I ++I + + P
Sbjct: 802 VRQNSVFWNTSGVDVSIGLTGAEVKAGTLESIVRGGITFATPENVQLQPIAREESTFLLH 861
Query: 153 NTSKKISD 160
+ +K
Sbjct: 862 SKAKPEWR 869
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 11/80 (13%), Positives = 26/80 (32%), Gaps = 4/80 (5%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE-YPNHS 81
+ W+ + V I GL +++R+ G+ +G + + L ++ +
Sbjct: 34 VVTWM-VFKGFQDAGERVQIYFTD-AQGLVAGRTAIRYQGLEIGMVKDINLAKDLQSIYV 91
Query: 82 LAKALIRPDTPLYPSTTATI 101
A L +
Sbjct: 92 DADIYPEAKKLLTQGARFWM 111
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 10/91 (10%)
Query: 10 VGLFVVSILF---------FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
+G V + + +++ L + G + + +P + S + +
Sbjct: 246 IGTLVAGAIAVDSPDGGAPIANNTLFKLYPDIKTAGRGIAIKLELPENSHVRQIGSPIMY 305
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
GI +G+I L L ++ +A A I+P
Sbjct: 306 RGIEIGQITDLKLSKD-EKQVIASAAIQPAF 335
>gi|227506008|ref|ZP_03936057.1| phage infection protein [Corynebacterium striatum ATCC 6940]
gi|227197290|gb|EEI77338.1| phage infection protein [Corynebacterium striatum ATCC 6940]
Length = 682
Score = 41.8 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 40/444 (9%), Positives = 104/444 (23%), Gaps = 34/444 (7%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDS--SV 58
+ + ++ L W + + ++ + + G V
Sbjct: 13 RRATKNVMAAVILFGLVVIPLLFTWFNVLASWDPFSNTGQLKVAVASEDTG-YKSDIFPV 71
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
N VG + + A + + ++ +
Sbjct: 72 PLN---VGE--------QVLSQLRANDKLDWIITDPENALDGTKSGEYYAAIVLPEHFSS 120
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ A S NA + +I E+ L
Sbjct: 121 DMMTFYAEGAKPTE--------ISLYTNEKKNALAPKITNQGAEGVSSQIAESFTHTLGD 172
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + N + +T + SL +
Sbjct: 173 VSLGLISSLDDYLNQGDTQAALKRIETRADGIEAQLHTGARTARSMASLVDSSVPLVESA 232
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ + + + +T ++ V Q+ID L S+ S + +
Sbjct: 233 QRIANAPRPSLDAPSGELNLSTESLDAALSQTADSYDVVRQRIDALYDSASTSRASMQAT 292
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF-AELMSKIN 357
R TD + + + + + + + + L++ N
Sbjct: 293 LNTLAGQVQGQIDAYKGLRDRINTDVKPVLPAEAAQLTSNLDEAIAAQEAVHSRLVAAAN 352
Query: 358 NISALKENNSLFKDAQRAMH-----TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
K + S A+ A+ R + ++ + +G ++ D +
Sbjct: 353 APGTEKPDFSAIDRAKEAIERSRNSQLRTSVGQLQSSLQRVGQDIGTQGSGISLDTET-- 410
Query: 413 RKLQETVNHFDDCLNNFERNPQDI 436
L + + + + +
Sbjct: 411 --LTGARDALTTLASELDSDGERF 432
>gi|115525025|ref|YP_781936.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
gi|115518972|gb|ABJ06956.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
Length = 563
Score = 41.8 bits (95), Expect = 0.24, Method: Composition-based stats.
Identities = 21/213 (9%), Positives = 64/213 (30%), Gaps = 16/213 (7%)
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ N+Q ++ + S V V+E+ + E + S+ ++
Sbjct: 337 EEASTNVQSVASATEEMSSSVNEISRQVQESARIANEAVDQARKTNDSVSALSQAANRIG 396
Query: 300 FLENIADSTSN-----MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ + ++ + ++ + + + ++ + ++ + ++ ++
Sbjct: 397 DVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEISQQIN 456
Query: 355 KI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN--- 406
I ++ A+KE T E+ I N+Q +Q
Sbjct: 457 GIQSATQESVGAIKEIGQTIGKMSEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSA 516
Query: 407 ---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
D+Q + + R+ +
Sbjct: 517 NITDVQRGATETGSASTQVLSAAQSLSRDSNRL 549
>gi|297584271|ref|YP_003700051.1| SMC domain-containing protein [Bacillus selenitireducens MLS10]
gi|297142728|gb|ADH99485.1| SMC domain protein [Bacillus selenitireducens MLS10]
Length = 1121
Score = 41.8 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 27/300 (9%), Positives = 77/300 (25%), Gaps = 8/300 (2%)
Query: 140 TPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
P + + + + I E + + + +
Sbjct: 529 NPDEPCPLCGSVHHEVNHLEAFENADEHIPSLDTFVGEVDRLTDEVNTHRIKLESTAENI 588
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
+ + S D + + + +K I + +
Sbjct: 589 PLSPENTSIESGDEVKVPDLYANDFEEGLRRLKQTMHASAQTIGKLYSDVHETLSQLRHH 648
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ +E +++ S +MK E + + + +++
Sbjct: 649 QDQLMTSKER-LSGIEEQKKQLIMEHSRTDGEMKETEIEWRKHTASIPFKQAEAVVQSLK 707
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN--NISALKENNSLFKDAQRAMH 377
E + +I+ + N + E + K+ +A + + +
Sbjct: 708 EKKELYHRILGRLENARPAIEKKNALINQSNEELYKLQVKKTAAETKLAFQLEQIETIDK 767
Query: 378 TFRDTSE-----KINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
+ + ++ I + + L+ + D+Q + LQ N +N E
Sbjct: 768 SVQSLTDGEQPEDIKKRVSEKILYLKERFEKADQDVQQKEKDLQRISNELIRLESNLESK 827
>gi|162148127|ref|YP_001602588.1| putative chemoreceptor mcpA (methyl-accepting chemotaxis protein)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209542768|ref|YP_002274997.1| methyl-accepting chemotaxis sensory transducer [Gluconacetobacter
diazotrophicus PAl 5]
gi|161786704|emb|CAP56287.1| putative chemoreceptor mcpA (Methyl-accepting chemotaxis protein)
[Gluconacetobacter diazotrophicus PAl 5]
gi|209530445|gb|ACI50382.1| methyl-accepting chemotaxis sensory transducer [Gluconacetobacter
diazotrophicus PAl 5]
Length = 627
Score = 41.8 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 49/449 (10%), Positives = 122/449 (27%), Gaps = 15/449 (3%)
Query: 1 MESKNYYTSVGL-FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGL-STDSSV 58
M S+GL F++ L F I + Q + + E+ + ++ GL + DS +
Sbjct: 1 MRFFGIKVSLGLLFILIALSCVFSGISSIRGLTQVNLRVEEIAHKSLANIRGLAAIDSQI 60
Query: 59 R-FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
R F G+ + A + I T +
Sbjct: 61 RAFRGV------EIKQLGTSSPEEFATLS-SSSAAISDKIAHAIDAYVPFIQTDQDQVLF 113
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + + + + I + + + +
Sbjct: 114 HNLETQWDEYKDFHDTTFKNWG--AAHDRTQTLVNEGQRLIELQETVSETLTSFMNGNIQ 171
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ + T V+ S N + L + + Q
Sbjct: 172 DAATYASESGATYTATLRRVYAAYVTLFVSMLISGLVVVLNILRPLQKINASISRLAKGQ 231
Query: 238 KVNQI-LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + +S D R+ + + Q+ D + K +++
Sbjct: 232 TDLTFPCADRKDEIGDISRSLDVFRAAAIAKRDLERDAELQRQRADTERASIQKKAEAEA 291
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ + ++ + + E+ +L + FA++ I
Sbjct: 292 SEWLRRATGTLAAGLKRMAEGDLSFQIETRFSKEFEPLREDFNQSLTQLAATFAQMSGAI 351
Query: 357 NNIS-ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
IS +E + + E+ + + I ++ + ++ Q + +
Sbjct: 352 QAISNGARELATGADNLASRTERQATALEQTDAAVAGIAQSVGDTARRS-ETAQQIGTQA 410
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGS 444
+ + + E I G E+ S
Sbjct: 411 RRSAAASSTITHATEEAMNRIENGSEQIS 439
>gi|153823951|ref|ZP_01976618.1| mce related protein [Vibrio cholerae B33]
gi|126518528|gb|EAZ75751.1| mce related protein [Vibrio cholerae B33]
Length = 714
Score = 41.8 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 39.9 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|317125892|ref|YP_004100004.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
gi|315589980|gb|ADU49277.1| virulence factor Mce family protein [Intrasporangium calvum DSM
43043]
Length = 452
Score = 41.8 bits (95), Expect = 0.25, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 1/60 (1%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L + V+ G+ VG + + Q+ LA + + +A + + L G Y
Sbjct: 65 LQEHADVKLRGLVVGEVRTIEATQQGARLGLA-LDPEQASQIPADVSARLLPKTLFGERY 123
>gi|254286436|ref|ZP_04961394.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
gi|150423603|gb|EDN15546.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
Length = 760
Score = 41.5 bits (94), Expect = 0.26, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 406 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 455
Score = 39.9 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 650 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 689
>gi|323495214|ref|ZP_08100298.1| methyl-accepting chemotaxis protein [Vibrio brasiliensis LMG 20546]
gi|323310573|gb|EGA63753.1| methyl-accepting chemotaxis protein [Vibrio brasiliensis LMG 20546]
Length = 770
Score = 41.5 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 42/413 (10%), Positives = 128/413 (30%), Gaps = 22/413 (5%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
G I +V+ +S + V G+ G I + +L + +
Sbjct: 363 LQGQSGYASIFDYRNVEVMSAYAPVTVAGLSWGIITEI-----DRGEALQDISTLNNAVI 417
Query: 94 YPSTTATIRTQGLAGIT--YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
T+ I L+ + ++ S R +I + +++
Sbjct: 418 MTVVTSIIVVVILSIVISYFLGSSIARPISSASRKIQQISANNDLTQRLKVEGKDEMTDL 477
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ + + I L + ++ ++++ + T +
Sbjct: 478 AVSLNGLFSHLQDIIGKFGQATNNLNSNTQSMAGNMNNTRDSVADQNARTETVATAVNQM 537
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + + + QI +N+ + + + + T
Sbjct: 538 SASISEVAQFANRAAEFVKQANDTGSEGVQIGQNLGEEISRLDAEMQTAVAAIERLNNET 597
Query: 272 QTFQEVGQKIDHLLSD-----FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ EV I + ++ +++ A +RS + T++ +
Sbjct: 598 NSIAEVLDVIQGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAGRTQASTEEIR 657
Query: 327 KIISTINTIEN-ITSNLNDSSQKFAELMSKINN--------ISALKENNSLFKDAQRAMH 377
I ++ +++++ +++ ++ ++ + +S L E N + A
Sbjct: 658 GKIESLQRETQGVSTSIQNANSTVSQGVTTCDENTQMLEQIVSMLNELNEMNVQIAAATE 717
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ +++I+ I SI + + S + D ++++ + + + F+
Sbjct: 718 EQKAVTDEISGSITSIADASASVSVQ-VQDADDVLQGISNEAEQLNSEVTQFK 769
>gi|258621548|ref|ZP_05716581.1| Methyl-accepting chemotaxis protein [Vibrio mimicus VM573]
gi|258586166|gb|EEW10882.1| Methyl-accepting chemotaxis protein [Vibrio mimicus VM573]
Length = 389
Score = 41.5 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 69/244 (28%), Gaps = 8/244 (3%)
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ + + + + F K + +
Sbjct: 125 LLVMAAGVYYIMTFIGGAMYSLHKALETLGKGDLTYRMNYFPVRDEFSEIAITFDKVAQR 184
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
VH ++E+ Q++ ++ L + S+ + + + +
Sbjct: 185 EQKLVHSIQESVALMQQISSDLN-LSAQSSASASESQQEHLNSLASATEQMASTIREVAG 243
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHT 378
D Q+ + + + + +L +I + S A+ E +S + T
Sbjct: 244 LAHDSSQQTEEAKRVANSGQAKVTQTLTSVGQLAREIGSASHAVTELDSNAAQIDAVVTT 303
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERN 432
SE+ N + + G ++++ L + Q + +RN
Sbjct: 304 INAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQSATVEIQSMIEALQRN 363
Query: 433 PQDI 436
Q +
Sbjct: 364 SQSL 367
>gi|239937537|ref|NP_001155228.1| myosin heavy chain [Oryzias latipes]
gi|239735374|dbj|BAH70477.1| myosin heavy chain embryonic type 1 [Oryzias latipes]
Length = 1938
Score = 41.5 bits (94), Expect = 0.27, Method: Composition-based stats.
Identities = 28/306 (9%), Positives = 89/306 (29%), Gaps = 17/306 (5%)
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
E +S +R Q + IE+ ++ + + S +
Sbjct: 1292 RQLEEKEALVSQLTRGKQAFTQQIEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYE 1351
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
++K+ S + Q E ++ S + + V
Sbjct: 1352 EEQEAKSELQRGMSKANSEVAQWRTKYETDAIQRTEELEDSKKKLAQRLQDAEECIEAVN 1411
Query: 269 ETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
+ ++ Q++ + D + + N + + + +
Sbjct: 1412 AKCASLEKTKQRLQAEVEDLMIDVERANALAASLDKKQRNFDKVLAEWKQKYEESQAELE 1471
Query: 324 QRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRAMHTFRD 381
QK ++ + + ++ ++ + L + N+ + + + + +H
Sbjct: 1472 GAQKEARSLSTELFKMKNSYEEALDQLETLKRENKNLQQEISDLTEQLGETGKTIHELEK 1531
Query: 382 TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR----------KLQETVNHFDDCLNNFER 431
+ + I L+ + ++ ++R ++ + D+ + +R
Sbjct: 1532 GKKTVESEKSEIQTALEEAEATLEHEESKILRVQLELTQVKGEIDRKLAEKDEEIEQIKR 1591
Query: 432 NPQDIV 437
N Q ++
Sbjct: 1592 NSQRVI 1597
>gi|327270531|ref|XP_003220043.1| PREDICTED: coiled-coil domain-containing protein 18-like [Anolis
carolinensis]
Length = 1427
Score = 41.5 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 38/356 (10%), Positives = 108/356 (30%), Gaps = 18/356 (5%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITA---TPS 142
++ D + + Q ++ ++TI E +Q +
Sbjct: 757 RLQRDIKIKNDNLQSTTEQNHVLQQALQHQQQMLHQETIRNSELEDSQVKLQKQLSKIEQ 816
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
N E +K ++ + + E + + I I + + M
Sbjct: 817 KYQMQKENLEEELRKSNEKLQLACEEAEMKRQKVLELSGTIRQIKLEMDQCKEELIDMEK 876
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
+K ++ Q+V ++ + + S +++ ++
Sbjct: 877 ELVHLRRDGHTKAMQLGHMEMGLEQKSSELNKKTQQVKELEDKLLASEMQRKEAAQKIEV 936
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+D++ T + +++ L + ++ + + ++ +RE
Sbjct: 937 LENDMQNATSELKTTLRQLQELR---------EMFQNAQMSLEEKYAAIQDLTEELRECK 987
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL--KENNSLFKDAQRAMHTFR 380
D+ + + ++ I N ++ A +++++ +E + A+
Sbjct: 988 DELEDKKQDLLEMDKILKERNWDLKQRAAQVTQLDMSVREHREELEQKITKLEEALEKAE 1047
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
++ N+ I S+ + L+ N+I + ER Q I
Sbjct: 1048 LQIKECNKQIESLESKLE----HSKNEISEKEFNSLQQDQEISRLKKETERKQQRI 1099
>gi|326678013|ref|XP_002666141.2| PREDICTED: LOW QUALITY PROTEIN: myosin heavy chain, fast skeletal
muscle, partial [Danio rerio]
Length = 1888
Score = 41.5 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 86/295 (29%), Gaps = 10/295 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E + I + + + ++ E M
Sbjct: 1309 QAYTQQIEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1368
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ V
Sbjct: 1369 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEV 1428
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S EI
Sbjct: 1429 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTEIFKM 1487
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L ++ E + ++A T
Sbjct: 1488 KNSYEEALDQLETLKRENKNLQQEISDLTEQL------GETGKSIHELEKAKKTVESEKA 1541
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+I + L++ L ++ + ++ + D+ + +RN Q +
Sbjct: 1542 EIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEIEQIKRNSQRV 1596
>gi|323492623|ref|ZP_08097767.1| mce-related protein [Vibrio brasiliensis LMG 20546]
gi|323312998|gb|EGA66118.1| mce-related protein [Vibrio brasiliensis LMG 20546]
Length = 877
Score = 41.5 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 13/91 (14%), Positives = 30/91 (32%), Gaps = 1/91 (1%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL-AKALIRPDTPLYPSTTATIRTQ 104
+ G+S S + + IP+G + LDQ+ N + A + + +
Sbjct: 170 SRDLGGISVGSQIVYRKIPIGEVYSYQLDQDSKNVIIQASIRDEYRHIITDDSRFWNVSG 229
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRA 135
A I + + + + + +
Sbjct: 230 IGANIGFEGVDVRLESFSALLGGSIAVDSPD 260
Score = 40.7 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
I + GL +++ + GI VG + + L + AL+ D
Sbjct: 401 TLIADNSFGLDKGANILYRGISVGSVTQVNLVDD---KVQLDALVDSDY 446
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVFKA-----VQDAGQRVQIYFSD-AQGLIAGRTTIRYQGLEVGMVKDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L +
Sbjct: 83 AEDLQSIYVDADIYPEATKLLTKEARFWL 111
Score = 37.2 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 11/98 (11%), Positives = 32/98 (32%), Gaps = 3/98 (3%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
S ++ + V + I VG++ + L E+ + ++ +I + + ++ +
Sbjct: 753 SESRGSITAGTPVLYREIEVGQVTNVQL-GEFADRVISTIVIDSEYAYLVRHNSVFWNTS 811
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
I + ++I + P
Sbjct: 812 GVDVSIGITGANVRAGTLESIMRGGITFATPEQKQLEP 849
>gi|156537468|ref|XP_001607160.1| PREDICTED: similar to microtubule-associated protein [Nasonia
vitripennis]
Length = 5401
Score = 41.5 bits (94), Expect = 0.28, Method: Composition-based stats.
Identities = 22/209 (10%), Positives = 53/209 (25%), Gaps = 6/209 (2%)
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
+I K ++V++ + + ++ L + + I
Sbjct: 1318 DIDKVFPKVEKHEEKVVSFEQVQPQVSDIRVAAIKETAAFLQEEIKSSGVAIAEPSSDII 1377
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
+ + + D + + + L K +
Sbjct: 1378 DKTKDEKLEVQLEDKIVEDIEEVEALVEEASMKFKNVKDSLQDSLESLEDKADGAKKSAA 1437
Query: 365 NNSLF--KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
++ A D I+ I S F +D + V F
Sbjct: 1438 ASADMVKDTLIEAAEKLDDIKSDISDLIESKEPEKVKFIIPSSDDTEKDEDDSDGVVRDF 1497
Query: 423 DDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + R+ +++ G ++ KPK
Sbjct: 1498 KEAV----RDVAEVLMGTSGIEIEKEKPK 1522
>gi|29832442|ref|NP_827076.1| mce-related protein [Streptomyces avermitilis MA-4680]
gi|29609561|dbj|BAC73611.1| putative mce(mammalian cell entry)-related protein [Streptomyces
avermitilis MA-4680]
Length = 415
Score = 41.5 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 28/83 (33%), Gaps = 5/83 (6%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
Q P + + + L + V+ G+ VG + + D + ++P+
Sbjct: 31 YQQVFTPAVRIKLEADSLGNQLDPRADVKLRGLLVGEVRAVHADG---TKATLDIALKPE 87
Query: 91 T--PLYPSTTATIRTQGLAGITY 111
+ A + + L G Y
Sbjct: 88 YVASIPSDAHARLLPKTLFGEKY 110
>gi|308496705|ref|XP_003110540.1| CRE-MYO-5 protein [Caenorhabditis remanei]
gi|308243881|gb|EFO87833.1| CRE-MYO-5 protein [Caenorhabditis remanei]
Length = 1960
Score = 41.5 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 35/279 (12%), Positives = 93/279 (33%), Gaps = 9/279 (3%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++ + +++ T A IE A + S + +
Sbjct: 1154 EELGDRLDEAGGATQAQIELNKKREAELAKLRQDLEDAAINAETSMAALRKKHNDAVAEL 1213
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
S K+ + + Q + +S+D + + I L
Sbjct: 1214 SDQLDTVQKMRGKLEREKNDKQREVDELQQSADVEAKQRQTCERMAKQLEAQLTDI-TLK 1272
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
SD +++ + T + + +++ R A +++ + N +E + L+
Sbjct: 1273 SDEQARLIQELTMSKNKTHSENQDLNRQLEDAESQLSALNRIKQQQHNQMEELKRTLDQE 1332
Query: 346 SQKFAELMSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+++ S+++N ++ ++ Q A + K N I + S
Sbjct: 1333 TRERQSFHSQVSNYQLECEQLRESLEEEQDAKTDVQRQLSKANSEIQQWRAKFEGEGVSR 1392
Query: 405 LNDIQNL-------VRKLQETVNHFDDCLNNFERNPQDI 436
+++ V+++QE + + + + E+N Q +
Sbjct: 1393 AEELEETRRKLTHKVQEMQEQLENANQKIGTLEKNKQRL 1431
>gi|116062147|dbj|BAF34704.1| fast skeletal myosin heavy chain isoform mMYH-7 [Oryzias latipes]
Length = 1936
Score = 41.5 bits (94), Expect = 0.29, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 89/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1308 QAFTQQIEELKRLVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1428 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1487 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKS 1540
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1541 EIQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEMEQIKRNSQRVI 1596
>gi|294506829|ref|YP_003570887.1| methyl-accepting chemotaxis protein [Salinibacter ruber M8]
gi|294343157|emb|CBH23935.1| methyl-accepting chemotaxis protein [Salinibacter ruber M8]
Length = 696
Score = 41.5 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 43/438 (9%), Positives = 120/438 (27%), Gaps = 22/438 (5%)
Query: 5 NYYTSVGLFVVSIL-FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ VG+F++ + + +N ++ +V V G
Sbjct: 217 VTWAMVGIFILLAAGIAAILYVLRSRVTNPLRSFARQLTDSEEENVT-------VSVEGA 269
Query: 64 PVGRIVGLFLDQEYPNHSLAK-ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
I + +A+ D + ++ +
Sbjct: 270 R--EITAVAEAFNQQQRQIAEAMEALEDEKASVERRVEEAVRESEQQKERLQESVDTMLE 327
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
I + A + T I + +++ + A+
Sbjct: 328 AIGRFADGDLTVRLPTGREGAIGRLFEGFNEAVAGLRSIVGRVREAAGSTVSATEQISAS 387
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
E ++ + +++ + + + T + + V +
Sbjct: 388 SEQMAASAEEQSAQAEEVAAAVEELNQTINGNARSVQKTAEVAQAGGETARQGGETVREA 447
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-----KIDHLLSDFSSKMKSKET 297
++ ++ +++ + E Q + + L + + +E
Sbjct: 448 TSQMEGIASAIENTTETIERLGTYGDEIGQVVDRIDDIAGQTNLLALNAAIEAARAGEEG 507
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK-----FAEL 352
F + + +A EI ++ I+ + ++K
Sbjct: 508 KGFAVVAEEVRELAEEADAATDEIAGMMDEVREEIDGAVGTARQSSQRAEKGLELAEEAG 567
Query: 353 MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
+ ++A+ E ++ A TSE+I R + SI Q S +G+ ++ +
Sbjct: 568 AAIEEIVTAISEVEERAEEIAAASEEQSTTSEEIARSVQSISTAAQE-SAAGVTEVSDTA 626
Query: 413 RKLQETVNHFDDCLNNFE 430
+L+ ++ + F
Sbjct: 627 DRLERLSTELEETVQQFR 644
>gi|254226554|ref|ZP_04920136.1| IS4 ORF [Vibrio cholerae V51]
gi|125620890|gb|EAZ49242.1| IS4 ORF [Vibrio cholerae V51]
Length = 518
Score = 41.5 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 23/59 (38%), Gaps = 9/59 (15%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+ GL + + + G+ VG + + L +Y + + + A IR+Q
Sbjct: 375 DNSFGLEAGTPILYRGVAVGSVTAVNLKLDY---------VEFNVLIDEQYGALIRSQN 424
>gi|301605390|ref|XP_002932332.1| PREDICTED: myosin-6-like [Xenopus (Silurana) tropicalis]
Length = 1903
Score = 41.5 bits (94), Expect = 0.30, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 93/287 (32%), Gaps = 13/287 (4%)
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
Q+I + ++ T A + + + ++ + + +
Sbjct: 1276 FTQQIEDLRKQLEEETKAKNALAHALQSARHDCDLLREQFDEEQEAKAELQRSLSKGNAE 1335
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + + +Q+ ++ E + + ++ + V +T + +++
Sbjct: 1336 VATWRNKYETDAIQRTEELEEAKKKLAARLQEAEEAVEAANAKCASLEKTKHRLQNELED 1395
Query: 284 LLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI--------NT 334
++ D S + N ++ + + + QK + N
Sbjct: 1396 MMIDLERSNAAAAAMDKKQRNFDKLIADWKQKYEETQAELETSQKDARGLSTELFKLKNA 1455
Query: 335 IENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
E + NL ++ L +I++++ + E N + ++ ++ +
Sbjct: 1456 YEEVLDNLETVKRENKNLQEEISDLTDQISEGNKSLHEIEKVKKQVEQEKSEVQVALEEA 1515
Query: 394 GNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
L++ L ++ + + + ++ D+ N RN Q I+
Sbjct: 1516 EGALEHEESKTLRFQLELSQIKAEFERKLSEKDEETENIRRNLQRII 1562
>gi|315636233|ref|ZP_07891486.1| methyl-accepting chemotaxis protein [Arcobacter butzleri JV22]
gi|315479475|gb|EFU70155.1| methyl-accepting chemotaxis protein [Arcobacter butzleri JV22]
Length = 667
Score = 41.5 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 48/442 (10%), Positives = 131/442 (29%), Gaps = 29/442 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M KN +G F++ I+ SI I + D L+ F
Sbjct: 1 MSIKNK--IIGAFLILIVVSIVSSILVSFNIKN-----------INNNTDALAEKD---F 44
Query: 61 NGIPVGRIVGLFLDQEYPNHSLA---KALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
GI V L D++ +LA ++ + + T + +
Sbjct: 45 AGITVL----LEADRDSYQSNLALSQIMNLKDNQQIEKLITKGVEDNLSQIRQRFDKFKG 100
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ + + + T S + ++ KI ++ + +
Sbjct: 101 FLKDELSSKSKEFDDFDKYYNLTKSNTQTLLKLVKD--GKIEEARTFYFSTYSKDYESMR 158
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
I + + + + + ++ + + T ++ K +
Sbjct: 159 DIIDFFSDEAYKVVDKNKIEVESLISSSLNTFVIITILTILITLFFSYAISKTFNNSIKK 218
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ +LE + +S ++ ++ + ++ + K ++L+ + ++ +
Sbjct: 219 LQSGLLEFFNFLNKETKSASLLDTSSKDEIAQISEVINKNIIKTENLIVQDNLLIEDVKA 278
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
N T + S + +T ++ ++N+ + +K++
Sbjct: 279 VVSAVNDGKFTKRIEKSTENQNLEELKNIFNEMLESTKNSVAKDINELLKVLDN-FAKLD 337
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINR---YIPSIGNNLQNFSQSGLNDIQNLVRK 414
+++N + + T + + + L +
Sbjct: 338 FKERIQDNGKVAVGINNLVETITQMLVENKSNGLTLRESSDILLSNVDKLNISSNEAAAS 397
Query: 415 LQETVNHFDDCLNNFERNPQDI 436
L+ET ++ +N N Q+I
Sbjct: 398 LEETAAALEEVTSNIRNNTQNI 419
>gi|254226555|ref|ZP_04920137.1| mce related protein [Vibrio cholerae V51]
gi|125620891|gb|EAZ49243.1| mce related protein [Vibrio cholerae V51]
Length = 256
Score = 41.5 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 15/128 (11%), Positives = 37/128 (28%), Gaps = 6/128 (4%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--L 93
G + GSV + + + I VG+++ + L E+ + + I P L
Sbjct: 125 GNTYTLQSEKRGSVS---VGTPILYRDIEVGKVIDVRL-GEFADRVITTIRIAPQYTYLL 180
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
++ + I + ++ + TP+
Sbjct: 181 RQNSVFWNVSGLDMSIGITGANVKAGTFDSMLRGGITFATPEQKQLTPAAPEGHTFYLYP 240
Query: 154 TSKKISDS 161
+++
Sbjct: 241 QAQEEWTK 248
Score = 40.7 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
G+ + V++ G+ +G + + D E A I P
Sbjct: 27 GVKVGTPVQYQGVQIGEVFEIIPDFESD-FVKLAARIEPQY 66
>gi|223043087|ref|ZP_03613134.1| conserved hypothetical protein [Staphylococcus capitis SK14]
gi|222443298|gb|EEE49396.1| conserved hypothetical protein [Staphylococcus capitis SK14]
Length = 9801
Score = 41.5 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 37/370 (10%), Positives = 107/370 (28%), Gaps = 11/370 (2%)
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
LD P S + + P + I ++ + + + Q
Sbjct: 3418 LDNSNPTVSQVNNALNNIKAVQPKLDSAIHLLENKANNSELVTAKDQLQAALNQPDPTHG 3477
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ + ++ ++ + I + + + + + L
Sbjct: 3478 MTPQTITNYNAKKQAAQAELQKADQVINNGDATAQQISAEKDKVDQALQALNSAKNDLRA 3537
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ S + +T + + + + Q+L+N S
Sbjct: 3538 DKSELQTAYNTLTEQVSTEGKTPASIKKYQDAKAKIQNQINAAQNEAKQVLDNENPSVEQ 3597
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ +++ ++ + + + + + + + + ++
Sbjct: 3598 VNHALNEIDTVQPELNKAIHLLENKANNSELVTARNQ---LQEAINNQPSTTGMTQDSIN 3654
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + + + S I+ + + D K + + +N+ A + +
Sbjct: 3655 NYNAKRADAQSAINQANSIIDNGDATAQQIADEKSKVNQALQALND--AKQHLTADTSRL 3712
Query: 373 QRAMHTFRDTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
Q A++ T + N+ SI LQ+ + N+ +++K TVN D L
Sbjct: 3713 QNALNGLNRTGDTNNKKPNSIESYNKAMQALQSQITAAKNNANTVIQKAIRTVNEVDQAL 3772
Query: 427 NNFERNPQDI 436
+ Q +
Sbjct: 3773 QEVNQVNQQL 3782
>gi|226330437|ref|ZP_03805955.1| hypothetical protein PROPEN_04355 [Proteus penneri ATCC 35198]
gi|225201232|gb|EEG83586.1| hypothetical protein PROPEN_04355 [Proteus penneri ATCC 35198]
Length = 689
Score = 41.5 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 48 SVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
LS +R+ GI +G++ L L + A++ PD
Sbjct: 454 DASKLSEGMPIRYLGIDIGQVESLILSPDRKA-VTVSAVLYPDY 496
Score = 41.1 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 9/71 (12%), Positives = 23/71 (32%), Gaps = 3/71 (4%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LY 94
++I + L+ DS V + +PVG++ + + + I +
Sbjct: 76 KNQQLITLTADKLGSLNVDSQVYYRQVPVGKVYSYAIRPDNQG-VFIELSIDKQYAHLIR 134
Query: 95 PSTTATIRTQG 105
+ +
Sbjct: 135 QDSHFWNVSGF 145
Score = 39.9 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 20/57 (35%), Gaps = 3/57 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
+ + + + G+ VG + GL L + L I + +T + +
Sbjct: 568 AGSVQIGTPIYYRGLEVGAVTGLEL-GNMSDRVLIHIRISKKYQYLVRNNTEFWLSS 623
>gi|2351219|dbj|BAA22067.1| myosin heavy chain [Cyprinus carpio]
Length = 1933
Score = 41.5 bits (94), Expect = 0.31, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 72/201 (35%), Gaps = 5/201 (2%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q L++ + S + T ++ + G++ + L ++ K ++ +
Sbjct: 1394 QRLQDAEESIEAVNSKCASLEKTKQRLQSEVEDLMIDGERANALAANLDKKQRNFDKVLA 1453
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ +A +E ++ N+ E +L ++ L +I+++S
Sbjct: 1454 DWK-QKYEESQAELEAAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLS 1512
Query: 361 -ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQ 416
L E + ++A T +I + L++ L ++ + ++
Sbjct: 1513 EQLGETGKSIHEIEKAKKTVESEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 1572
Query: 417 ETVNHFDDCLNNFERNPQDIV 437
+ D+ + +RN Q ++
Sbjct: 1573 RKLAEKDEEMEQIKRNSQRVL 1593
>gi|260820391|ref|XP_002605518.1| hypothetical protein BRAFLDRAFT_116231 [Branchiostoma floridae]
gi|229290852|gb|EEN61528.1| hypothetical protein BRAFLDRAFT_116231 [Branchiostoma floridae]
Length = 519
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 46/448 (10%), Positives = 105/448 (23%), Gaps = 64/448 (14%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPG-------------SVDGLSTDSS--VR 59
+ F F ++ S S+Q E + G G + S VR
Sbjct: 7 LVDAFLLIFFVFLGSTSSQTPHKRFEYKLSFKGPHLVQKNGKIPFWDYSGHAIASDEQVR 66
Query: 60 F-------NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA--TIRTQGLAGIT 110
G + +++ + + + A +T+G+ G
Sbjct: 67 ITPSLRSKR----GNVWSTYINGHDHWYIEVTIRVTGRGRIGADGLAIWYTKTRGVDGPV 122
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
Y + S N N +D ++ +
Sbjct: 123 YGSSDRWNG----------------VGVFFDSFDNDNQHNNPYVLVMQNDGTKSYNHAND 166
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + L + + + + + + + + + L+K
Sbjct: 167 GLTQQLGGCLRDFRNKPYPVRAKLEYYQNRLTLWYNNGMTPNKDEYELCMQAHEVHLEKG 226
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ ++ V S F + T +
Sbjct: 227 GFFGVSAATGGLADDHDVLSFLFYSLTPPTSEVPGKEGFIT--------------DEERE 272
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + ++ A E + I +
Sbjct: 273 RFTGEFDQYQQKFEKQREEYVKEHPDAQVEAEFDAVFEREEERELRLIFEGQEKIHKTVR 332
Query: 351 ELMSKINNISALKE-NNSLFKDAQRAMHTFRDTS-----EKINRYIPSIGNNLQNFSQSG 404
+L K++ I +E SL Q+ M + I + + S
Sbjct: 333 DLQRKLDEIIGRQERTLSLVSTVQQNMPSAGSVQPASGGGGQPAPAMPIQRHEVDAVLSA 392
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERN 432
++ +R L+ V+ + E N
Sbjct: 393 QRELTQGLRDLRSKVDTIHNRAATIETN 420
>gi|310830388|ref|YP_003965489.1| Minor extracellular protease epr [Paenibacillus polymyxa SC2]
gi|309249855|gb|ADO59421.1| Minor extracellular protease epr [Paenibacillus polymyxa SC2]
Length = 974
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 39/399 (9%), Positives = 106/399 (26%), Gaps = 15/399 (3%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
+DG V + + +G++T +VRF + + P
Sbjct: 258 WDGNDLLVKVAYKKNTNGITTTDNVRF----------FNVIKADVAPVKPTIQANTTNPT 307
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ TI + ++ + K +N + A + N
Sbjct: 308 NKNIQVTITYSADSATKEYKIGENGEWKTYASSFEVSQNTKIYARAKNARGTLSDEAVMN 367
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
S + + I++ + LT T + N T + +
Sbjct: 368 ISNIDKTAPQATNIIVDQNKLTLTGGADAEGTSKLMYKLNGQDWVVYTETVVLPNGEYEI 427
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
++ + +S+ + + + Q E + + N ++ T+ D
Sbjct: 428 QSKAVDASGNESSVASQKVTVFVVDLAQATEAVVKAENAPSQTHVTNAQTLIDALPQVDG 487
Query: 274 FQEVGQKIDHLLSDF---SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
++ ++D + D + K T N + + + K +
Sbjct: 488 KDQLQVRLDKVKDDLAKYEAIQKEINTMNDTLNKGNVKKEVVLQYLKRIDELYDLVKALP 547
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTF--RDTSEKINR 388
+ L+D K + + S + + ++ D + + +
Sbjct: 548 NTMDKATLNKQLDDLKNKLILIGKILELNSDGDHQDVDLGGLEDTVNKLPNGDLKDDLQK 607
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
+ + + + + + + +
Sbjct: 608 QLDQAKDLQDAIKKVEKAEQSKSQEDIDRARDAVNKLPD 646
>gi|254508788|ref|ZP_05120900.1| mce related protein [Vibrio parahaemolyticus 16]
gi|219548308|gb|EED25321.1| mce related protein [Vibrio parahaemolyticus 16]
Length = 852
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 15/122 (12%), Positives = 35/122 (28%), Gaps = 8/122 (6%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ V I GL +++R+ G+ VG + + L
Sbjct: 4 ILTVILAGWLVFKA-----IQDAGERVQIYFSE-ASGLIAGRTTIRYQGLEVGMVRDINL 57
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
++ + A L +T + + L L + E
Sbjct: 58 AKDLQSIYVEADIYPEATKLLNENTRFWMVKPTASLSGISGLDALVSGNYIAISPSDEPG 117
Query: 133 QR 134
Sbjct: 118 DP 119
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHS 81
+ + + GI +G++ L L E N
Sbjct: 275 GAPIMYRGIEIGQVTDLQLRDERKNIV 301
>gi|41408287|ref|NP_961123.1| hypothetical protein MAP2189 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396643|gb|AAS04506.1| hypothetical protein MAP_2189 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 411
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 21/254 (8%), Positives = 67/254 (26%), Gaps = 5/254 (1%)
Query: 30 RSNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI 87
+ V + GL + + V+ +G PVG + + +
Sbjct: 44 QFRGGFTQTVPVTVVAGR--AGLMMNPGAKVKLHGAPVGSVASIQDRADGQADIHLALDP 101
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLR-KEKKTIFQIATERNQRAMITATPSGINY 146
+ + I G +I+L + + R +
Sbjct: 102 SRLQLIPANVLVNIVATTAFGAKFIQLIPPESPSPQRLRAGQVLDAGRVTVEINSVFQQL 161
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
A+ K++++ + + L +++ + ++ ++ + T
Sbjct: 162 TSVLAKIDPAKLNETLGAMATALNGRGARLGQMFSDLNNFLGKIEPSLPNLSHDIEATAE 221
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ T+ + Q ++ +L + ++ + +
Sbjct: 222 VSSAYADAAPDLITVADRTTRISQTLVDEQQNLDALLISSIGLADLGNDVLGTNREKLAE 281
Query: 267 VRETTQTFQEVGQK 280
V ++ +
Sbjct: 282 VTHLLAPTTDLTNE 295
>gi|114321055|ref|YP_742738.1| DNA repair protein RecN [Alkalilimnicola ehrlichii MLHE-1]
gi|114227449|gb|ABI57248.1| DNA replication and repair protein RecN [Alkalilimnicola ehrlichii
MLHE-1]
Length = 564
Score = 41.5 bits (94), Expect = 0.32, Method: Composition-based stats.
Identities = 20/227 (8%), Positives = 68/227 (29%), Gaps = 18/227 (7%)
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD-FSSKM 292
D + + E+ ++ S + ++ + +G+++ + +
Sbjct: 77 HDWLAEHDLDEDGDCILRRTIQESGRTRGYINGRPAPLNLLKALGEQLVDIHGQHAHQLL 136
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ-KFAE 351
+ + + + ++ + + + + + + + E
Sbjct: 137 LRRHVQRRILDEHADEGGALERVRSLHQQLRAVDEELRALEGDRESHEDRLALLRYQVDE 196
Query: 352 LMS---KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS--GLN 406
L + + I AL++ +A + + + + S L S+ G
Sbjct: 197 LAALELTVEGIEALEQEQKRLANAGALIQMAQQILDPLYDDEQSAQAALGRASRELDGHA 256
Query: 407 DIQNLVRKLQETV-----------NHFDDCLNNFERNPQDIVWGREK 442
+ + + +E + +N E +P+ + W E+
Sbjct: 257 GLDPALDEARELFGNALVQLEEGCDALRRFADNLELDPERLAWAEER 303
>gi|257866720|ref|ZP_05646373.1| phage infection protein [Enterococcus casseliflavus EC30]
gi|257872763|ref|ZP_05652416.1| phage infection protein [Enterococcus casseliflavus EC10]
gi|257800678|gb|EEV29706.1| phage infection protein [Enterococcus casseliflavus EC30]
gi|257806927|gb|EEV35749.1| phage infection protein [Enterococcus casseliflavus EC10]
Length = 901
Score = 41.5 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 47/454 (10%), Positives = 117/454 (25%), Gaps = 45/454 (9%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDG-------LSTDSSV-- 58
+ F++ L W + +D G +E+ I + + G + V
Sbjct: 23 ISAFLIIALMILPSLYAWFNIKALWDPYGNTSELPIAVYSADKGAEFQDKHIDIGDEVID 82
Query: 59 ------------------RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
G+ G+ ++ L T+
Sbjct: 83 TLHKNKQLGWRFLDSKEDLVEGVKSGK-----------YYAGIYLPADFSDDLISFTSGK 131
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
I + Y K + A+ + + + I I
Sbjct: 132 IEKPTIEY--YSNQKINAIAPKITDKGASSLQEEISQNFIETASSTLIKVFNEIGYDIDS 189
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ I K+ I ++ + + + +
Sbjct: 190 NLVSINKVKSMILDTDDNLATIDGYTKEIVTLHDKFPEIKEKIAKAEEFTDYIPQVDAMG 249
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
LI DK+ + L+ N K + + D+ T + ++
Sbjct: 250 EKLIGLNDKLPALKKEASIILTLQEKIPEIQNAGKQLKMIDDDFDDIASTMTDGIDTAKQ 309
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
++ + + E + + +T+ + + + TI +I + +
Sbjct: 310 GLQVIEQVQAALPQIE-QLGDQAASFATATKDGAQQLQDALPSISSSVKVTIESISQVAT 368
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF 400
+ + ++ +N +E ++ + ++ I + N +
Sbjct: 369 TTAGLTSTIRQALA--DNELTDEERQAISATITDFQKNIQQQQAALDSLIAFLTNIQNSG 426
Query: 401 SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
S + L I + + T+ D L+ Q
Sbjct: 427 SNADLEGIIAQLSNAKTTLGVLSDRLSQLNNLVQ 460
>gi|167950848|ref|ZP_02537922.1| hypothetical protein Epers_32408 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 82
Score = 41.5 bits (94), Expect = 0.33, Method: Composition-based stats.
Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 5/65 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M SK + V V+ + +FS + + D + S G+ S V
Sbjct: 1 MSSKIIFVIV---VLLVSAGIYFSWLQFIKGLRTDKDRSSTETTFEASASGVKVSSPVL- 56
Query: 61 NGIPV 65
G+ +
Sbjct: 57 -GVII 60
>gi|34496535|ref|NP_900750.1| methyl-accepting chemotaxis protein [Chromobacterium violaceum ATCC
12472]
gi|34102389|gb|AAQ58755.1| probable methyl-accepting chemotaxis protein [Chromobacterium
violaceum ATCC 12472]
Length = 628
Score = 41.1 bits (93), Expect = 0.33, Method: Composition-based stats.
Identities = 25/240 (10%), Positives = 75/240 (31%), Gaps = 18/240 (7%)
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ ++ + ++ ++ V D
Sbjct: 321 TRRIDIHGEDEVAQTAEAFNQFVGRLNGMFRELRGEAEELAHGVIEVGGAVKQVASDSHR 380
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
I+ + S ++ T ++ + R S ++ I+ + ++
Sbjct: 381 LADISSSNAAAIEEVTVSIS--HIAEATRETDSLARNTGEHSRESAGDMQRISSEMEQTS 438
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA------------MH 377
+++ + + ++L SQ+ +++ + I++I+ +L + A
Sbjct: 439 QSVSELSALLASLEQRSQEISKITNVISDIADQTNLLALNAAIEAARAGEQGRGFAVVAD 498
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
R +E+ + I ++N L + V +Q TV+ D + + ++
Sbjct: 499 EVRKLAERTGKATVEISEMVENI----LGETGKAVGNMQRTVSAVDTSVELTSQARGRLI 554
>gi|16801522|ref|NP_471790.1| transmembrane protein [Listeria innocua Clip11262]
gi|16414982|emb|CAC97687.1| transmembrane protein [Listeria innocua Clip11262]
Length = 927
Score = 41.1 bits (93), Expect = 0.34, Method: Composition-based stats.
Identities = 40/418 (9%), Positives = 125/418 (29%), Gaps = 30/418 (7%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG--I 63
+ FVV + ++ ++L G ++ + + + V +NG +
Sbjct: 14 NKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDK------PVDYNGQTM 67
Query: 64 PVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + L ++ + + QGL Y + T+ K+
Sbjct: 68 DVGDQLVTKLKSNK----------ELDWNFLSKEDAE-----QGLKDGKYYMVVTIPKDF 112
Query: 122 KTIFQIATERNQRAMITATPSGINYFI-SNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++ + M + + + + S ++ ++ + + I
Sbjct: 113 SKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKI 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ I + +Q + + + L + L+
Sbjct: 173 KESGDGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYT 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE--TS 298
+ + + V +++ K+ +S ++S + + +
Sbjct: 233 DGVNTAAAGGDKLNAGVSTLAAGVGPLKDGVAALDGGATKLSSGVSTYTSGVDTLSGGIN 292
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ + ++ + ++ ++ ++L D S K + + +++
Sbjct: 293 QAYNGSTALSDGLNKMNGSVPALASGVTQLNDGQKSLATGLNSLVDGSNKLSAGLKELDG 352
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L + ++ M+ + +++N+ + L Q+ + +L L
Sbjct: 353 --NLTNSQGKIAQLKQGMNDLQQGIDQLNQNVNGEDAALAKQLQALQKSLTDLQNGLT 408
>gi|87309000|ref|ZP_01091138.1| hypothetical protein DSM3645_19623 [Blastopirellula marina DSM
3645]
gi|87288343|gb|EAQ80239.1| hypothetical protein DSM3645_19623 [Blastopirellula marina DSM
3645]
Length = 1206
Score = 41.1 bits (93), Expect = 0.35, Method: Composition-based stats.
Identities = 20/233 (8%), Positives = 83/233 (35%), Gaps = 9/233 (3%)
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ + + ++ +A++++ Q + ++ ++ R + + +
Sbjct: 648 LEENSSPAERAAQAVEMRGKLSETVEKQRDAERQLEEMIAGLSQWDTYRRFALDLRGLRE 707
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN-I 338
+ L ++ + S + + ++ +Q +I S + +E +
Sbjct: 708 RQQELQERTQAEQAATIGKTPESLDPAERSERKRLATDQADLANQLDRIQSRMREMEQQL 767
Query: 339 TSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRA-MHTFRDTSEKINRYIPSIGNNL 397
++ +++ + + + S ++ S + + ++++ + + + L
Sbjct: 768 AASEPAAAETLKDAIEQQRQESISQKMRSAGAQLAQNQLGEAATAQTEVDQQLGEMLDIL 827
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHF-------DDCLNNFERNPQDIVWGREKG 443
N ++ L + + +++ ++ + +D L +NP GR+
Sbjct: 828 NNRRENRLKQLADKLKEAEQELRELKAKQKGLEDKLKQAAKNPDAGERGRQLE 880
>gi|268553511|ref|XP_002634742.1| C. briggsae CBR-ELKS-1 protein [Caenorhabditis briggsae]
Length = 715
Score = 41.1 bits (93), Expect = 0.36, Method: Composition-based stats.
Identities = 27/324 (8%), Positives = 94/324 (29%), Gaps = 9/324 (2%)
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
N+ T ++ ++ +K++ I + ++ E I
Sbjct: 271 TNREQHNTLLQGDVDALRQKLDSKNKQLEQKDERIAVLERDLSSAKADVSDKTELIRQTE 330
Query: 191 ANNISHIDKM--MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
I ++ + T + ++ +K + Q + + +
Sbjct: 331 IKTSQLIGRIDSLENTVREKEQDLDRAKIRLLSHPDVQKEKEMTERIEQGERERIRLQEH 390
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA-DS 307
S + + + + + + L+D ++S+ N +
Sbjct: 391 IDQLRRNSEKEHLEQQKTYQNEMTQLRGTIENLQKELADRDILLESQNEKIGDMNRDLNQ 450
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ + R + +E + ++ ++ L ++I +
Sbjct: 451 AKKRLDDAMVDKGTDELRMDVEDARKEVEKLLKMVHSLEKENLNLTAQIKQNAEKTTVPP 510
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNH 421
+ + +++ I + L+ L+ ++ ++++ +N
Sbjct: 511 SSGSVAGTLTKSSNQQSNLHKRIEELEEALRESVSITAEREVHLSQQKHHLQQVSSQLNE 570
Query: 422 FDDCLNNFERNPQDIVWGREKGSV 445
+++ RN Q + G ++ +
Sbjct: 571 ARKEISDLRRNKQSVSEGGDRDQM 594
>gi|84394274|ref|ZP_00993000.1| hypothetical protein V12B01_24839 [Vibrio splendidus 12B01]
gi|84375113|gb|EAP92034.1| hypothetical protein V12B01_24839 [Vibrio splendidus 12B01]
Length = 885
Score = 41.1 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTVALAGWLVMK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDITL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SKDLSSIYVDADIYPEAKKLLSKGTRFWL 111
>gi|226434435|dbj|BAH56385.1| myosin heavy chain [Takifugu rubripes]
Length = 1938
Score = 41.1 bits (93), Expect = 0.38, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 88/296 (29%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1310 QAFTQQIEELKRHVEEEVKAKNALAHGVQSARHDCDLLREQYEEEQEAKAELQRAMSKAN 1369
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ V
Sbjct: 1370 SEVAQWRSKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEV 1429
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F + ++ + E A+ + + S E+
Sbjct: 1430 EDLMIDVERANSLAANLDKKQRNFDN-FLAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1488
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + +++ T
Sbjct: 1489 KNSYEEALDHLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKSKKTVETEKS 1542
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1543 EIQAALEEAEGTLEHEEAKILRVQLELNQIKGEVDRKLAEKDEEMEQIKRNSQRVI 1598
>gi|326797829|ref|YP_004315648.1| DNA repair protein RecN [Sphingobacterium sp. 21]
gi|326548593|gb|ADZ76978.1| DNA repair protein RecN [Sphingobacterium sp. 21]
Length = 551
Score = 41.1 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 24/223 (10%), Positives = 72/223 (32%), Gaps = 11/223 (4%)
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ D + + + + + + V+D T T + +G+++ + S
Sbjct: 69 QIEEYNLGDFFQEEDLDYEPETILRREISADGKSRAFVNDTPVTLSTLKALGERLIDIHS 128
Query: 287 D-----FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
+++ T + + + R++T ++ ++
Sbjct: 129 QHATLEINTEDFQLMTLDSVGENGSLLKTYQETFRKYRQVTQALHDLMEESKQAQSEADY 188
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF- 400
+ A + AL++ + A+ + ++ + N+L+
Sbjct: 189 HQFLYDELAAAKLNGDEQEALEQEQNQLSHAEEIKRALLAANFLLSEQEQPVINSLKEAG 248
Query: 401 -----SQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
++ ++++ L +LQ + D ER Q I++
Sbjct: 249 LQIQQAERYVSNLHELSERLQSALIEIKDIAEEVERTEQHILF 291
>gi|222624023|gb|EEE58155.1| hypothetical protein OsJ_09072 [Oryza sativa Japonica Group]
Length = 654
Score = 41.1 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 18/257 (7%), Positives = 80/257 (31%), Gaps = 6/257 (2%)
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
++ + + + S+S + + + V
Sbjct: 149 LSFGSPEVKGCDAISNEMVNLQQEISRLLAESNSMKQQILSESERANKAENEIQVLKDTV 208
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
++ + S + +S++++ ++ + +++ ++ + SS
Sbjct: 209 LKLNSDKDTSLLQYNQSTERLSTLESELSKAQDDLKKLTDEMATEVQKLSSAEARNSEIQ 268
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
D M+ ++ + + + + + S+ ++
Sbjct: 269 SELEALDQKVKMQQEELEQKQKELKSFNLTFQEEQDKRLQAESALLSE-----GKELAQC 323
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
++ + A ++ + T + + + +++ ++ + + L+++L++ +
Sbjct: 324 QEVQRLTMEIQMANEKLNELKQTKVNLENAVSELKKEVESLTEQNRSS-ELLIQELRDEI 382
Query: 420 NHFDDCLNNFERNPQDI 436
N D N + Q +
Sbjct: 383 NSLTDSRNELQNEIQSL 399
>gi|116062141|dbj|BAF34701.1| fast skeletal myosin heavy chain isoform mMYH-1 [Oryzias latipes]
Length = 1937
Score = 41.1 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 29/294 (9%), Positives = 84/294 (28%), Gaps = 6/294 (2%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E +++ + + + ++ E M
Sbjct: 1309 QAFTQQIEELKRQVEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1368
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1369 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1428
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1429 EDLMTDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1487
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-TFRDTS 383
+ ++ +E + + Q+ ++L ++ K +
Sbjct: 1488 KNSYEEALDQLETMKRENKNLQQEISDLTEQLGETGKSIHELEKAKKTVETEKCEIQTAL 1547
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
E+ + + + ++ + ++ + D+ L +RN Q ++
Sbjct: 1548 EEAEGTLEHEESKILRVQL----ELNQVKGEIDRKLAEKDEELEQIKRNSQRVI 1597
>gi|323498365|ref|ZP_08103365.1| mce-related protein [Vibrio sinaloensis DSM 21326]
gi|323316607|gb|EGA69618.1| mce-related protein [Vibrio sinaloensis DSM 21326]
Length = 878
Score = 41.1 bits (93), Expect = 0.40, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++ V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTVILAGWLVFKA-----VQDAGQRVQIYFSE-ASGLIAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L +T +
Sbjct: 83 AEDLQSIYVDADIYPEAAKLLTKNTRFWM 111
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 10/100 (10%), Positives = 30/100 (30%), Gaps = 3/100 (3%)
Query: 46 PGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRT 103
S ++ + V + + VG++ + L E+ + + I D + ++ +
Sbjct: 753 SESRGSVTKGTPVLYREMEVGQVTEVKL-GEFADRVITTISINSDYAYLVRRNSVFWNTS 811
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
I + ++ + + P
Sbjct: 812 GLDVSIGISGANIKAGTVDSLVRGGITFSTPENKQLEPIA 851
>gi|115655426|ref|XP_784803.2| PREDICTED: similar to ENSANGP00000010787 [Strongylocentrotus
purpuratus]
gi|115963244|ref|XP_001188277.1| PREDICTED: similar to ENSANGP00000010787 [Strongylocentrotus
purpuratus]
Length = 2879
Score = 41.1 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 36/357 (10%), Positives = 89/357 (24%), Gaps = 15/357 (4%)
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
L A + L I + ++ + A + A P I+
Sbjct: 1533 RLLDQAEAELAGVTLMFIEATQAI-GDADRALLDVNAIYIGSSSGNDALPMDIDVDQQGV 1591
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ + + T A + + +
Sbjct: 1592 NGWVDGNLRVIGQLGVVQGLQDSLEFTVSAAETRALLLSEQTQESLSYFQSAEPQGQLAV 1651
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
D+ + ++ + + + + + + + + + +D+ +T
Sbjct: 1652 DTVRNYRSVVSTVEEAEATNQNATDSLASTQDYLTTRTVAILSEEAQRSLQLSNDLTDTI 1711
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR-SSISAIREITDQRQKIIS 330
+ + L + ++S S S +++ + E + + I S
Sbjct: 1712 DGSMTDTEALTASLDSANQTLQSAIESWDNVRQDVSNLEAEVNTLLELAENPEIQPAIDS 1771
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNI------------SALKENNSLFKDAQRAMHT 378
I + N A L +++ +A L +
Sbjct: 1772 GIEAANETIAAGNSILDSTATLTERLDEEEQSIVFIQDNVRNATTLITGLPNRVSQIESN 1831
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
S ++ + ++ N N I +L KL+ D PQ
Sbjct: 1832 INTLSTNVDTIL-NLQNQTSILRSGINNKIASLREKLRRAQTTIADSDQPVRLGPQS 1887
>gi|59711882|ref|YP_204658.1| paraquat-inducible protein B [Vibrio fischeri ES114]
gi|59479983|gb|AAW85770.1| paraquat-inducible protein B [Vibrio fischeri ES114]
Length = 878
Score = 41.1 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + +Y + + I GL +++R+ G+ VG + + L
Sbjct: 30 LLALCLGGWLVY-----SSLMEAGQRIQIYF-EDAQGLMAGRTTIRYQGLEVGMVKNITL 83
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L +T +
Sbjct: 84 SKDLSNIYVDADIYPEASDLLKENTQFWL 112
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 33/124 (26%), Gaps = 6/124 (4%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RPDTPLYP 95
+ GSV + + F I VG + + L + + + I +
Sbjct: 747 SYTLEALSRGSV---KVGTPILFREIEVGEVTDVRL-GDLSDRIIITIGIHSEFAYLVRE 802
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
++ + I +I + + T P + T+
Sbjct: 803 NSVFWNVSGVNMSIGLSGAKVQAGTVDSILRGGIAFSTPDDETLKPQAKAHKSYLLHKTA 862
Query: 156 KKIS 159
++
Sbjct: 863 EEDW 866
>gi|197335605|ref|YP_002156072.1| mce related protein [Vibrio fischeri MJ11]
gi|197317095|gb|ACH66542.1| mce related protein [Vibrio fischeri MJ11]
Length = 878
Score = 41.1 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 13/89 (14%), Positives = 30/89 (33%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ L + +Y + + I GL +++R+ G+ VG + + L
Sbjct: 30 LLALCLGGWLVY-----SSLMEAGQRIQIYF-EDAQGLMAGRTTIRYQGLEVGMVKNITL 83
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L +T +
Sbjct: 84 SKDLSNIYVDADIYPEASDLLKENTQFWL 112
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 14/124 (11%), Positives = 33/124 (26%), Gaps = 6/124 (4%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI--RPDTPLYP 95
+ GSV + + F I VG + + L + + + I +
Sbjct: 747 SYTLEALSRGSV---KVGTPILFREIEVGEVTDVRL-GDLSDRIIITIGIHSEFAYLVRE 802
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
++ + I +I + + T P + T+
Sbjct: 803 NSVFWNVSGVNMSIGLSGAKVQAGTVDSILRGGIAFSTPDDETLKPQAKAHKSYLLHKTA 862
Query: 156 KKIS 159
++
Sbjct: 863 EEDW 866
>gi|134122720|dbj|BAF49657.1| myosin heavy chain [Saurida undosquamis]
gi|156229668|dbj|BAF75971.1| myosin heavy chain fast skeletal type 3 [Saurida undosquamis]
Length = 1936
Score = 41.1 bits (93), Expect = 0.41, Method: Composition-based stats.
Identities = 30/325 (9%), Positives = 96/325 (29%), Gaps = 17/325 (5%)
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ A + F E +S +R Q + IE+ ++ + +
Sbjct: 1272 INDMSAQRARLQTENGEFTRQLEEKEALVSQLTRGKQAFTQQIEELKRHVEEEVKAKNAL 1331
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S + ++K S +A Q E ++ +
Sbjct: 1332 AHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVSQWRAKYETDAIQRTEELEEA 1391
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENI 304
+ + + V + ++ Q++ + D + + N
Sbjct: 1392 KKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNF 1451
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-L 362
+ + + + QK ++ + + ++ ++ + L + N+ +
Sbjct: 1452 DKVLAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSYEEALDQLETLKRENKNLQQEI 1511
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR--------- 413
+ + +++H + + I L+ + ++ ++R
Sbjct: 1512 SDLTEQIGETGKSIHELEKAKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQIK 1571
Query: 414 -KLQETVNHFDDCLNNFERNPQDIV 437
++ ++ D+ + +RN Q ++
Sbjct: 1572 GEVDRKLSEKDEGMEQIKRNSQRVI 1596
>gi|160332467|dbj|BAF93224.1| myosin heavy chain fast skeletal type 3 [Hypophthalmichthys molitrix]
Length = 1932
Score = 41.1 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 32/325 (9%), Positives = 93/325 (28%), Gaps = 17/325 (5%)
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ A + F E +S +R Q + IE+ ++ + +
Sbjct: 1269 INDLSAQRARFQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRHIEEEVKAKNAL 1328
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S + ++K S + Q ++ S
Sbjct: 1329 AHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYEVDAIQRTGELEES 1388
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENI 304
+ + V V + ++ Q++ + D + + +N
Sbjct: 1389 KKKLAQRLQEAEEQVEAVNSKCASLEKTKQRLQAEVEDLMIDVERANGLAANLDKKQKNF 1448
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-L 362
+ + + + QK ++ + + ++ +S + L + N+ +
Sbjct: 1449 DKVLAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSYEESLDQLETLKRENKNLQQEI 1508
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR--------- 413
+ + + +H + + I L+ + ++ ++R
Sbjct: 1509 SDLTEQLSETGKGIHELEKAKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVK 1568
Query: 414 -KLQETVNHFDDCLNNFERNPQDIV 437
++ + D+ + +RN Q I+
Sbjct: 1569 SEIDRKLAEKDEEMEQIKRNSQRII 1593
>gi|328543384|ref|YP_004303493.1| Methyl-accepting chemotaxis protein signaling domain [Polymorphum
gilvum SL003B-26A1]
gi|326413129|gb|ADZ70192.1| Methyl-accepting chemotaxis protein signaling domain [Polymorphum
gilvum SL003B-26A1]
Length = 727
Score = 41.1 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 42/406 (10%), Positives = 123/406 (30%), Gaps = 13/406 (3%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
++ G A +++ VD L+ S V F G+ + ++ + +R
Sbjct: 300 TSALSGTAAAAVVKGEDGVDRLTVASPVSFM----GQTWAIVAEKTVEETLASVIEMRNS 355
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
L+ T I + L + IA + A I
Sbjct: 356 MMLWTLITVAIAALIALLFSRSITRPLTTLVSALEAIAGGNLNTEISAAKRGDEIGDIGR 415
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
A ++ + ++ ++ E + E +S + + + + ++ + +
Sbjct: 416 AVLKIRE-NAAAEQEERAQEEARLARSQAEQRQEMLSGLASEFEASVGNVVEAVSRSVAT 474
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
T + A + + +++I +S+ S Q+ +
Sbjct: 475 LQEAATEMQHMTVSAGDSASRAAEISNQAMEEVQSIATASDQLSSSIQQISELIARSSSV 534
Query: 271 TQTFQEVGQKIDHLLSDFSSKMK--SKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
QT Q + + + + + + + ++ + +
Sbjct: 535 AQTATIRAQATNSTVRSLAEAANRIGEVVTLISDIADQTNLLALNATIEAARAGEAGRGF 594
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTS 383
+ ++ + S ++++ + + I + + A+ E + ++
Sbjct: 595 AVVASEVKELASQTGKATEEIQQQIDAIRSATEDAVGAIAEIQETINEITMSVTEVSSAV 654
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
E+ + I +N Q ++ G ++ + +R + + F
Sbjct: 655 EEQSAATRGIADNTQRAAR-GTAEVSSDIRNVNDVTERTSKAAEGF 699
>gi|253990963|ref|YP_003042319.1| hypothetical protein PAU_03489 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253782413|emb|CAQ85577.1| Hypothetical protein yajC [Photorhabdus asymbiotica]
Length = 132
Score = 41.1 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ I+ F I++ E + +S V NG +GR+ +
Sbjct: 45 LIIMLVVFGLIFYFMILRPQQKRTKEHKKLMDS----ISKGDEVLTNGGLIGRVTKVS-- 98
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATI 101
+ + + + A +
Sbjct: 99 --DTGYVVVALNDTTEVTIKRDFVAAV 123
>gi|261415048|ref|YP_003248731.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261371504|gb|ACX74249.1| Mammalian cell entry related domain protein [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302326484|gb|ADL25685.1| hypothetical protein FSU_1068 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 338
Score = 41.1 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 37/297 (12%), Positives = 85/297 (28%), Gaps = 10/297 (3%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
+ L V + +F W + N I+ + L + V +G VG I
Sbjct: 11 ISLIVFAGIFAGISFGMWAAHQNV----HQTAIVDFKE-LGSLQPEDPVVLHGYRVGTIG 65
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ ++ S K L T L G +E+ +
Sbjct: 66 SVTWLKD---RSRVKIHFTEPLKLREGTQFNNVNYALMGQRRLEIIPSKTGTLMPENHVF 122
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ + I T + E K I ++ E + + +
Sbjct: 123 QGHFEPGIAETLRLVENVNEQLEAVRKTILLLAQGDSSHKSAPEIYEEAMHSIEDIFAHT 182
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
KM + S+ + + D L V+ ++ + +
Sbjct: 183 EKTVSKLGPKMNKLFKQMNSSTKAISKTALQADSAIKTVTASANEKLSLVDSVVITLTEN 242
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ + + + +T +E+ + I+ +++ + +++ +T F D
Sbjct: 243 AKKTNEVLTSIEKGID--SQTLLQSKELVENINEIIASLNKAVQTIDTKNFGFKDKD 297
>gi|218709403|ref|YP_002417024.1| hypothetical protein VS_1412 [Vibrio splendidus LGP32]
gi|218322422|emb|CAV18575.1| Hypothetical protein VS_1412 [Vibrio splendidus LGP32]
Length = 885
Score = 41.1 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTVALAGWLVMK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDITL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SKDLSSIYVDADIYPEAKKLLSKGTRFWL 111
>gi|47208510|emb|CAF96455.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1834
Score = 41.1 bits (93), Expect = 0.42, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 88/296 (29%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1167 QAFTQQIEELKRHVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRAMSKAN 1226
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1227 SEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1286
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1287 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1345
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1346 KNSYEEALDHLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKT 1399
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1400 EIQAALEEAEGTLEHEEAKILRVQLELNQIKGEVDRKLAEKDEEMEQIKRNSQRVI 1455
>gi|331700870|ref|YP_004397829.1| RND superfamily drug exporter [Lactobacillus buchneri NRRL B-30929]
gi|329128213|gb|AEB72766.1| RND superfamily drug exporter [Lactobacillus buchneri NRRL B-30929]
Length = 903
Score = 41.1 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 38/442 (8%), Positives = 110/442 (24%), Gaps = 55/442 (12%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGS-------------VDG 51
+ LFVVS+L + + + A S
Sbjct: 181 TNIILITLFVVSMLIVGIYFRSLFAPVISFITLFAAFTTSFSISTALAKHFHFAFTQYTP 240
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L + +G I +++ + ++ + Q +A + +
Sbjct: 241 LEIG----IATVVIGTIWNIYI----YRKLRSVLALQREARYAT-------QQTIADLRF 285
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + A T + ++
Sbjct: 286 PITIVGSALAIIFACCGFINYDQLQSLWVLGITYVVLMLAVLTLNAVFLAALGESIFWP- 344
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
++ + + + + V + + F + + + +
Sbjct: 345 -----SSAPLSAMKSHFWNRATDFSLWQPIAAFLVVLYLTLPFIYFYHTSLNFSPMTNLT 399
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ K +L+ + + D + Q ++ K+ H
Sbjct: 400 QTNQAVKGAHVLQAHFSQGKATPITIYLKNDQPLDNEKYLQHLDQLTTKLQHTKG----- 454
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ ++ E ++ S + T L+ +S
Sbjct: 455 -------------VSAAYSLTQPSGMPIEKYYVSNQLESIGLNAKQATGQLSQASNGIET 501
Query: 352 LMSKINNIS---ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
S +N +K+ SL K + + + + ++N + +Q + ++
Sbjct: 502 SGSNLNLSGLKQQVKDMQSLVKKSNQIVEDSSSLASQVNSVAANSSVAVQRGASRRVHMY 561
Query: 409 QNLVRKLQETVNHFDDCLNNFE 430
Q + +L +++ ++
Sbjct: 562 QQKINELNQSLQSVSSGISQLN 583
>gi|86747318|ref|YP_483814.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
gi|86570346|gb|ABD04903.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
Length = 688
Score = 41.1 bits (93), Expect = 0.43, Method: Composition-based stats.
Identities = 22/288 (7%), Positives = 73/288 (25%), Gaps = 6/288 (2%)
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ I + + + + + I + + + + +
Sbjct: 387 LEVIRLREEQEEAERRSAAQHKAEMQQLADEFEGAVGEIIQTVTSASTELEASAGTLTTT 446
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
+ + + ++Q V E + S + + + + +
Sbjct: 447 ADRSQELATSVAAASEQASANVQSVASATEEMASSISEISRQVQTSARIAGEAVDQARKT 506
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINT 334
+ + + ++ T A N+ + + ++ +
Sbjct: 507 NDRIGHLADAANRIGDVVELINTIAGQTNLLALNATIEAARAGDAGRGFAVVAQEVKALA 566
Query: 335 IENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
+ + S Q + +++ A++E + T E+ I
Sbjct: 567 EQTAKATGEISQQISGMQAATQDSVGAIREIGGTIERMSEIASTIASAVEEQGAATQEIS 626
Query: 395 NNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
N+Q +Q D+Q + + + R+ +
Sbjct: 627 RNVQQAAQGTQQVSSNICDVQRGATETGSASSQVLAAAQSLSRDSNRL 674
>gi|326382399|ref|ZP_08204091.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199129|gb|EGD56311.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 296
Score = 40.7 bits (92), Expect = 0.43, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 50 DGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL-IRPDTPLYPSTTATIRTQGLAG 108
DGL S V++ G VG++ + + ++ + + D L + G
Sbjct: 10 DGLKGGSEVKYRGFTVGKVSSVSV-RDQSTNVKIELTGANDDIRLSQGLAVNYTSASALG 68
Query: 109 IT 110
T
Sbjct: 69 PT 70
>gi|261210920|ref|ZP_05925210.1| methyl-accepting chemotaxis protein [Vibrio sp. RC341]
gi|260839895|gb|EEX66495.1| methyl-accepting chemotaxis protein [Vibrio sp. RC341]
Length = 467
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 71/244 (29%), Gaps = 8/244 (3%)
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ + + + + F K +++
Sbjct: 125 LLILAAGVYYIMTFIGGAMYSLHKALETLSQGNLTYRMNYFPVRDEFSEIAITFDKVAER 184
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
VH ++E+ Q++ ++ L + SS + + + +
Sbjct: 185 EQKLVHSIQESVALMQQISSDLN-LSAQSSSGASENQQEHLNSLASATEQMASTIREVAS 243
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHT 378
+ Q+ + + + +L ++I++ S A+ E +S + T
Sbjct: 244 LAHNASQQTEEAKRVANTGQTKVTQTLTSVGQLANEISSASHAVTELDSNAAQIDAVVST 303
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERN 432
SE+ N + + G ++++ L + Q + +RN
Sbjct: 304 INAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQSATVEIQSMIEALQRN 363
Query: 433 PQDI 436
Q +
Sbjct: 364 SQSL 367
>gi|221132584|ref|XP_002154216.1| PREDICTED: similar to viral A-type inclusion protein [Hydra
magnipapillata]
Length = 1869
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 29/301 (9%), Positives = 107/301 (35%), Gaps = 6/301 (1%)
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ +NT ++ ++ + + I++I +T +++ + N I+ + T + +
Sbjct: 1194 SLQNTLQERTEEQKELWDKIQDITIKHSTVTESLQQANKKEKNYQEQIEALTKTNHILHY 1253
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
S + + + I + +M + + N++ + + ++ +++
Sbjct: 1254 SLEKEKEERSDLQEIFEVMEMEHKKFKTETVGKVRNMEGKIEDLTIENSKLTQMKNELAL 1313
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
Q + + + +KS S + + + + + +
Sbjct: 1314 KCDELQSSVAEKEQQNAVLMEDIKSTVQSKLKVVSELTNLKESVKETEKSILENHQAYLN 1373
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
+ + + + + ++ L E + +++ + +++ ++
Sbjct: 1374 LELALKKEKDQSQSLTLTLEETETELVDANKNLYETKTKLSESKSEIDDLNKVAKERSQI 1433
Query: 390 IPSIGNNLQ---NFSQSGLNDI---QNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
I + +L+ LN + ++ ++L++T+N D + F+ + Q + R+
Sbjct: 1434 IRELERSLEVSKEQRDKYLNRVHFYESETKELRKTINEQTDEIEKFKFDLQRVSRERDIN 1493
Query: 444 S 444
Sbjct: 1494 K 1494
>gi|251792216|ref|YP_003006936.1| mce related protein [Aggregatibacter aphrophilus NJ8700]
gi|247533603|gb|ACS96849.1| mce related protein [Aggregatibacter aphrophilus NJ8700]
Length = 884
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 9/62 (14%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNH-SLAKALIRPDTPLYPSTTATI 101
+ ++ S + + G+ VG I L L+ R + ++ I
Sbjct: 753 VLETNDALNITAGSPIMYRGVEVGTIKNLELNSLGDRVFINVLIAPRYQHLVRQNSEFWI 812
Query: 102 RT 103
+
Sbjct: 813 SS 814
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 12/100 (12%), Positives = 30/100 (30%), Gaps = 10/100 (10%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F V I + DG+ + +R+ G
Sbjct: 24 RISPFWLLPFIALCIGAVLFF-------QIVQEQGISVRISFS-NGDGIVAGKTQIRYQG 75
Query: 63 IPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ +G + + + +A + L +T +
Sbjct: 76 LQIGVVKKVNFTNDLQTVEVVANIYPEARSVLRENTKFWL 115
>gi|86148633|ref|ZP_01066915.1| hypothetical protein MED222_14175 [Vibrio sp. MED222]
gi|85833589|gb|EAQ51765.1| hypothetical protein MED222_14175 [Vibrio sp. MED222]
Length = 885
Score = 40.7 bits (92), Expect = 0.44, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTVALAGWLVMK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDITL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SKDLSSIYVDADIYPEAKKLLSKGTRFWL 111
>gi|302673377|ref|XP_003026375.1| hypothetical protein SCHCODRAFT_114599 [Schizophyllum commune H4-8]
gi|300100057|gb|EFI91472.1| hypothetical protein SCHCODRAFT_114599 [Schizophyllum commune H4-8]
Length = 1453
Score = 40.7 bits (92), Expect = 0.45, Method: Composition-based stats.
Identities = 16/185 (8%), Positives = 54/185 (29%), Gaps = 8/185 (4%)
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
++V + D + + Q I + D + + +A ++ ++
Sbjct: 625 REEVKKAMEDAPSASPPRDQDEQAIAAVQRDVQEVRRELQDIRS--EVAKASQDVEDVRE 682
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
+ + + + + +NL + A M ++ E + + +
Sbjct: 683 DVNGLRRTSSGLSREVEGVSRAAANLERRVEDLAREMEHLSRDVVRGELGRQVSEVRGDV 742
Query: 377 HTFRDTSEKINRYIPSIGNNLQNF------SQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ + + ++Q+ + + + V+ L+ V +
Sbjct: 743 QSVSRDISSARGDVQNTARDVQSVRGDVHDVRRDVQSVSRDVQDLRRDVQDVRREMARLA 802
Query: 431 RNPQD 435
P +
Sbjct: 803 SPPNE 807
>gi|315442440|ref|YP_004075319.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
gi|315260743|gb|ADT97484.1| virulence factor Mce family protein [Mycobacterium sp. Spyr1]
Length = 423
Score = 40.7 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 11/90 (12%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
++ +++ L ++ V+ G VG++ + ++ I
Sbjct: 40 GVGTGGYQLTAVFSNALN-LPANAKVKLAGADVGQMESM---VARNYTAVTTLRIMDGVQ 95
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKK 122
L +TA +R+ G ++ + +
Sbjct: 96 LPQGSTAELRSATPLGDVFVAIKPPSPIQP 125
>gi|169631113|ref|YP_001704762.1| putative Mce family protein [Mycobacterium abscessus ATCC 19977]
gi|169243080|emb|CAM64108.1| Putative Mce family protein [Mycobacterium abscessus]
Length = 344
Score = 40.7 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 32/246 (13%), Positives = 58/246 (23%), Gaps = 5/246 (2%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ I SV L + V G+ VG + + L P +A I D
Sbjct: 39 KNTYRLKIEFS-SVLNLPGRAKVDSGGVQVGLLDRVELKGTTP---VAYVEIDGDAKFPE 94
Query: 96 STTATIRTQGLAGITYIELSTL-RKEKKTIFQIATERNQRAMITATPSGINYFISNAENT 154
+ A +R + G YI + + + T + A + +SN
Sbjct: 95 NVRAELRQATVLGDIYIAMISPKDPATTHLKDGDTITLANTVPAANVEDLMRSMSNLIGG 154
Query: 155 SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSK 214
+ + I ++ + T T S
Sbjct: 155 GSLNTMQTTVANMNSAFPPPEELDRIHRALAGVIHDLSSNQDTLNKILTNMQTVSESFRA 214
Query: 215 NTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTF 274
N + L K+ + L + N + + T
Sbjct: 215 NKGTYLRLLSEGPTKLPSLAKVVLSLSDLIINASEFGRQIGQILDYPNLMQILSYLTPFV 274
Query: 275 QEVGQK 280
Sbjct: 275 HSASTA 280
>gi|114764497|ref|ZP_01443722.1| hypothetical protein 1100011001295_R2601_11449 [Pelagibaca
bermudensis HTCC2601]
gi|114543064|gb|EAU46083.1| hypothetical protein R2601_11449 [Roseovarius sp. HTCC2601]
Length = 410
Score = 40.7 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 14/179 (7%), Positives = 49/179 (27%), Gaps = 3/179 (1%)
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
F ++ ++ S ++ S + ++
Sbjct: 223 NRFYRELEEWLSTITKLSFSGDGEQASDTGIVEQVLDQMTDQMERLTLMFSRAQEGQNEV 282
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ + ++ +++ N+++ + E + T + +
Sbjct: 283 DARLGQLADSVERMTERLEATAPSANSLARIAEGQERLAEVLAERETSEGLDAESRMRLR 342
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
SI + + Q + +L+ + + L PQ + +++ +P
Sbjct: 343 SIDVQMLRLLEEVAAGRQESMAELRTDLAALNRTLTKLSHAPQAQ---PQSVTIRPVRP 398
>gi|118381862|ref|XP_001024091.1| hypothetical protein TTHERM_00658900 [Tetrahymena thermophila]
gi|89305858|gb|EAS03846.1| hypothetical protein TTHERM_00658900 [Tetrahymena thermophila
SB210]
Length = 702
Score = 40.7 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 28/291 (9%), Positives = 89/291 (30%), Gaps = 5/291 (1%)
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
H+ + E + N I S + N +
Sbjct: 136 HLIPFEQIQENKYFEIFNRKIKDYVTMQNFILGKLVDQERNGQPMRSRSDDDMGNLSKII 195
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
S + I +++ Q++ + N K Q+ + + +++ + + ++
Sbjct: 196 DVSFFERISQEQQEQIQQLMRKEEELHNEISKLKQQIDSQNNQMKDQEKYISILEKQNSD 255
Query: 284 LLSDFSSKMKSKETSAFL-ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
L + K + ++ + A+++ + + + I +
Sbjct: 256 LQDENHLKSDEMNRQSLHLKDFQNLKEETEKQSEALQQSNKKIKMMEEQIRQSQEELQTE 315
Query: 343 NDSSQKFAELMSKINNI----SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + ++ I S + E ++ ++ Q+ + +++ E+ + Q
Sbjct: 316 KRRADNLHSKLKDLDQIKQYQSQITELKTVNQNIQQKVESYQKIIEQQKHKLEKEVKEKQ 375
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ +++E + L+ E+N + + +K + Y
Sbjct: 376 QIIDQIKTQKTQMQIEIEEKQSMIQRYLDTIEQNENEKIKLSQKINEYEYT 426
>gi|86750100|ref|YP_486596.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
gi|86573128|gb|ABD07685.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
Length = 561
Score = 40.7 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 27/283 (9%), Positives = 73/283 (25%), Gaps = 10/283 (3%)
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ + I + + + + S +
Sbjct: 278 AQRKQDMNKLAHDFEAAVGEVIQTVSSASTELEASATTLTSNARHAQEVTTTVAAASEQA 337
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ ++Q V E + S + + + Q E ++ + +
Sbjct: 338 SANVQSVASATEEMASSVTEISRQVQESARIAREAVGQAQITNERVGELSTAAARIGDVV 397
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
T A N+ + + ++ + E + SQ+ + +
Sbjct: 398 DLINTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALA-EQTAKATGEISQQISGI 456
Query: 353 MSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN----- 406
+ + +SA++E + T E+ I N+Q +Q
Sbjct: 457 QAATDQSVSAIREIGATIGKMSEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSSSV 516
Query: 407 -DIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GREKGSVK 446
D+Q + + + + + G+ +V+
Sbjct: 517 IDVQRGASETGSASSQVLSAAQSLANDSNRLKLEVGKFLETVR 559
>gi|160332463|dbj|BAF93222.1| myosin heavy chain fast skeletal type 1 [Hypophthalmichthys molitrix]
Length = 1933
Score = 40.7 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 28/306 (9%), Positives = 92/306 (30%), Gaps = 17/306 (5%)
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
E +S +R Q ++ IE+ ++ + + S +
Sbjct: 1288 RQLEEKEALVSQLTRGKQAYVQQIEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYE 1347
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
++K S + Q E ++ S + ++ V
Sbjct: 1348 EEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEDSKKKLAQRLQDAEESIEAVN 1407
Query: 269 ETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENIADSTSNMRSSISAIREITD 323
+ ++ Q++ + D + + N ++ + + +
Sbjct: 1408 SKCASLEKTKQRLQGEVEDLMIDVERANALAANLGKKQRNFDKVLADWKQKYEESQAELE 1467
Query: 324 QRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRAMHTFRD 381
QK ++ + + ++ ++ L + N+ + + + +++H
Sbjct: 1468 GAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLTEQLGETGKSIHELEK 1527
Query: 382 TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR----------KLQETVNHFDDCLNNFER 431
+ + I + L+ + ++ ++R ++ + D+ + +R
Sbjct: 1528 AKKTVESEKSEIQSALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEMEQIKR 1587
Query: 432 NPQDIV 437
N Q ++
Sbjct: 1588 NSQRVI 1593
>gi|115526270|ref|YP_783181.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Rhodopseudomonas palustris BisA53]
gi|115520217|gb|ABJ08201.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Rhodopseudomonas palustris BisA53]
Length = 561
Score = 40.7 bits (92), Expect = 0.46, Method: Composition-based stats.
Identities = 28/302 (9%), Positives = 77/302 (25%), Gaps = 8/302 (2%)
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+K D + + E+ + + I + + + +
Sbjct: 258 MQNKLAFDREQQQDMARKATEQRKLDMNRIAGEFESAVGEIIETVSSASIELEASAGTLT 317
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
S + + + + ++Q V E + S N + + H+
Sbjct: 318 SSAERSQQLTVAVAAASEQASTNVQSVASATEELTSSVNEISRQVQESARIAHEAVGQAH 377
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
++ + ++ A N+ + + ++ +
Sbjct: 378 QTNHSVGELSEAAGRIGAVVELISNIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKA 437
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + S Q + + ++ A+ T E+
Sbjct: 438 LAEQTAKATGEISQQIASIQTATTQSVGAISAITGTINRMSEIAATIASAVEEQGAATQE 497
Query: 393 IGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDIV--WGREKGS 444
I N+Q +Q + D+Q + + ++ + GR S
Sbjct: 498 IARNVQQAAQGTMQVSSNITDVQRGASETGSASSQVLSSAQALAQDSNRLKTEVGRFLNS 557
Query: 445 VK 446
V+
Sbjct: 558 VR 559
>gi|171741689|ref|ZP_02917496.1| hypothetical protein BIFDEN_00777 [Bifidobacterium dentium ATCC
27678]
gi|283455002|ref|YP_003359566.1| hypothetical protein BDP_0048 [Bifidobacterium dentium Bd1]
gi|171277303|gb|EDT44964.1| hypothetical protein BIFDEN_00777 [Bifidobacterium dentium ATCC
27678]
gi|283101636|gb|ADB08742.1| hypothetical membrane protein pip [Bifidobacterium dentium Bd1]
Length = 757
Score = 40.7 bits (92), Expect = 0.47, Method: Composition-based stats.
Identities = 29/427 (6%), Positives = 109/427 (25%), Gaps = 34/427 (7%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+ L V L W + + +D G+ L + V +
Sbjct: 19 VIALIVSMGLVIVPALYAWFNIAASWDPY---------GNTKALK---------VAVANV 60
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + Q + ++ K I
Sbjct: 61 DS----GYKSELIPVRINVGETVLSALRANHQLDWQFVDSAKAVDGVKSGKYYAAI---- 112
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ T + + + + T +T++
Sbjct: 113 VIPKSFSADMMTLFSPTVKHATLKYYLNEKINPIAPHITDEGASTVANTIDKTFAKTMAQ 172
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
V + +++ + + Q+ + ++ + + + I+ + + + +
Sbjct: 173 VGLDLAANMLQYSQSPQMAQYMTNLTSNIDGMVSTISG-----AQAQVNAYSTLSGSADS 227
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ K R+T + + ++ + + A +
Sbjct: 228 VITSTDKLLASTRKAGKQARKTLKQSGTSTSTLTDACTNVTDAVNQALQQAVSALDDIAD 287
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ ++ T + + + + + + + + ++ S + +L
Sbjct: 288 KVGTAFDQLDKDATGAAKTLQDLSSQVSSSANVYGNYIAQLEKMRSAAEGLPDGDSKQAL 347
Query: 369 FKDAQRAMHTFRDT---SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
+ + + ++ + + + + S D Q ++ ++
Sbjct: 348 LNAIDKQIAALQAAQQDTQDLATALAAASKQVAADSGDIQRDRQQILNRITTAKRSITTV 407
Query: 426 LNNFERN 432
+++E+N
Sbjct: 408 QSDYEQN 414
>gi|316934366|ref|YP_004109348.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris DX-1]
gi|315602080|gb|ADU44615.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris DX-1]
Length = 561
Score = 40.7 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 23/284 (8%), Positives = 75/284 (26%), Gaps = 16/284 (5%)
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
E K + + + + Q +S T
Sbjct: 264 QEAASKADQDRVVAAQRKQEMEKLAHHFEAAVGEVIQAVSSASTELEASATTLTSSAQRA 323
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + Q N+Q ++ + + V V+++ + E +
Sbjct: 324 QEVTTSVAAASEQASANVQSVASATEEMASSVTEISRQVQDSARIAHEAVTQAQRTNERV 383
Query: 289 SSKMKSKETSAFLENIADSTSN-----MRSSISAIREITDQRQKIISTINTIENITSNLN 343
++ + + ++ + ++ + + + ++ +
Sbjct: 384 GELSQAATRIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTA 443
Query: 344 DSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
++ + ++ + I +++SA++E + T E+ I N+Q
Sbjct: 444 KATGEISQQIGSIQTATQDSVSAIREIGATISKMSEIASTIASAVEEQGAATQEISRNVQ 503
Query: 399 NFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q D+Q + + + +
Sbjct: 504 QAAQGTQQVSASVVDVQRGANETGSASTQVLSAARSLANDSNRL 547
>gi|262201201|ref|YP_003272409.1| mammalian cell entry related domain-containing protein [Gordonia
bronchialis DSM 43247]
gi|262084548|gb|ACY20516.1| Mammalian cell entry related domain protein [Gordonia bronchialis
DSM 43247]
Length = 343
Score = 40.7 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 18/88 (20%), Positives = 35/88 (39%), Gaps = 3/88 (3%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+V L D+ V NG+ G + L LD +L ++ D + + + ++ L
Sbjct: 50 DTVVNLPADARVTVNGMDAGVVRSLRLDGN---RALIGLVVDDDVAVSTAASVELKQDTL 106
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQR 134
G TY+ ++ + + T Q
Sbjct: 107 LGDTYVAITNPPNFGQAVPTGGTIGRQN 134
>gi|148982277|ref|ZP_01816692.1| Paraquat-inducible protein B [Vibrionales bacterium SWAT-3]
gi|145960567|gb|EDK25923.1| Paraquat-inducible protein B [Vibrionales bacterium SWAT-3]
Length = 607
Score = 40.7 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTVALAGWLVMK-----SVHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDITL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SKDLSNIYVDADIYPEAKKLLSKGTRFWL 111
>gi|115525520|ref|YP_782431.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
gi|115519467|gb|ABJ07451.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
Length = 563
Score = 40.7 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 21/221 (9%), Positives = 57/221 (25%), Gaps = 6/221 (2%)
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + ++Q V E + S + + + Q + ++
Sbjct: 329 TTMVAAASEEASTNVQSVASATEEMSSSITEISRQVQDSARIAGEAVQQAQKTNDRVGEL 388
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
+ ++ T A N+ + + ++ + + +
Sbjct: 389 AKAAARIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKAT 448
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
Q + ++ A+KE T E+ I N+Q +
Sbjct: 449 GEIGQQITGIQAATQESVGAIKEIGDTIAKMSEIASTIASAVEEQGAATQEISRNVQQAA 508
Query: 402 ------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
S + D+Q + + R+ +
Sbjct: 509 AGTHQVSSNITDVQRGATETGSASSQVLSAAQTLSRDSNRL 549
>gi|150403700|ref|YP_001330994.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C7]
gi|150034730|gb|ABR66843.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C7]
Length = 729
Score = 40.7 bits (92), Expect = 0.48, Method: Composition-based stats.
Identities = 42/401 (10%), Positives = 116/401 (28%), Gaps = 13/401 (3%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-DQEYPNHSLA-K 84
+L S ++ + + + V +G VG + + + +++ +
Sbjct: 142 FLIISGAEASKYSDYKVDNTNDALAICAVAPVYNSGKLVGAVTLVDIVNKDDYWVDRVKQ 201
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
T + + Q ++ K + + + +
Sbjct: 202 VTGNEATIFLKNVRISTTVQNNGRDATGTTASEEVYGKALNHQEHVGTATVLGQSYITKY 261
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ N I + + I I + + + K+
Sbjct: 262 SPIEDIDGNVVGMIFVGTPEGPFLAVINGIRNQIIIVAILGLLLSILIALYTGRKITKPI 321
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ + N ++ + + + N +K+ D +
Sbjct: 322 EELKKGTSEFGNGNYDYKTNVKTGDELQELSDSFN-----GMAGNIKNLMKTMDMDKVEL 376
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
++ K D + + A +A+ ++ + + Q
Sbjct: 377 ANLLNNVTNVMNNVAKGDFTARADENTENNTLQKAINTAVANVAQLIKDLREEVDLLNIQ 436
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
QK+ + E + + +++ + AE S + S L+E + ++ +E
Sbjct: 437 VQKVEDELKGAEETATQVTEAATQVAEASS--DQSSKLQEASDQLENTYGVAKEVYSAAE 494
Query: 385 KINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
+ + IG N S++G+ ++N + ++Q N +D
Sbjct: 495 ETVKAAEEIGEN----SENGVKKVENAISRMQSITNVIEDL 531
>gi|226939491|ref|YP_002794564.1| CheA [Laribacter hongkongensis HLHK9]
gi|226714417|gb|ACO73555.1| CheA [Laribacter hongkongensis HLHK9]
Length = 670
Score = 40.7 bits (92), Expect = 0.49, Method: Composition-based stats.
Identities = 24/212 (11%), Positives = 59/212 (27%), Gaps = 19/212 (8%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET-----SAFLENIADSTS 309
+ D T Q G++ + L+ S + + +
Sbjct: 154 DRQLGHPEGLQDRLAALGTVQPCGEQGEELVFQLQSGLSATDIAESLAFWLPPGQFRLEH 213
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLF 369
A D ++ + ++ A + ++ A
Sbjct: 214 LESQGDEAFGVFVDTQRVVATSATEPAAPVDEGWGLFAPPAAATADVSPPVAEPAATGST 273
Query: 370 KDAQRAM----HTFRDTSEKINRYIPSIGN----------NLQNFSQSGLNDIQNLVRKL 415
++A + R EK+++ + IG ++ ++Q + +L
Sbjct: 274 PALRQATPQPETSIRVNVEKVDQLLNRIGELVITQSMLAQQVERLGTLASEELQRGMAQL 333
Query: 416 QETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ T + + + P V+GR V+
Sbjct: 334 ERTTRELQEAVMSVRMLPVASVFGRFPRLVRE 365
>gi|189519129|ref|XP_001924009.1| PREDICTED: myosin heavy chain, fast skeletal muscle [Danio rerio]
Length = 1933
Score = 40.7 bits (92), Expect = 0.50, Method: Composition-based stats.
Identities = 30/324 (9%), Positives = 93/324 (28%), Gaps = 17/324 (5%)
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ A + F E +S +R Q + IE+ ++ + +
Sbjct: 1270 INDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEVKAKNAL 1329
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S + ++K S + Q E ++ S
Sbjct: 1330 AHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEES 1389
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENI 304
+ + + V + ++ Q++ + D + + N
Sbjct: 1390 KKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNF 1449
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-L 362
+ + + + QK ++ + + ++ ++ + L + N+ +
Sbjct: 1450 DKVLAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSYEETLDQLETLKRENKNLQQEI 1509
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR--------- 413
+ + +++H + + I L+ + ++ ++R
Sbjct: 1510 SDLTEQIGETGKSIHELEKAKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVK 1569
Query: 414 -KLQETVNHFDDCLNNFERNPQDI 436
++ + D+ + +RN Q +
Sbjct: 1570 GEIDRKLAEKDEEIEQIKRNSQRV 1593
>gi|316934595|ref|YP_004109577.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris DX-1]
gi|315602309|gb|ADU44844.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris DX-1]
Length = 661
Score = 40.7 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 42/417 (10%), Positives = 113/417 (27%), Gaps = 21/417 (5%)
Query: 48 SVDGLSTD---SSVR-FNGIPVGRIVGLFLDQEYPNHSLAKAL-----IRPDTPLYPSTT 98
+V G+ + V+ + G +G L ++++ H+L+ A I +
Sbjct: 246 NVAGIEEAIVLAPVKDYAGDAIGF-TALGVNRDVYVHALSDARQWSLGIGLAVLVLTMGA 304
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
AT+ ++ ++ L+ K + K
Sbjct: 305 ATLLSRSISHP-LRALTLGMKRLAEGDFSVVPPGLGRSDEIGEVAAAVEDFKQKAIDKAK 363
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
S++ ++ E+ + + I+ + + + + + T
Sbjct: 364 SEAEAKARQDQSLAEERKREMQKLADHFEGAVGEIINTVSSASTELEASARTLTATATRA 423
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ + ++Q V E + S + + + + E
Sbjct: 424 QEITTTVAAASEQASANVQSVASATEQLASSVSEIGRQVHESAKIAAEAVAQATETNERV 483
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
+ S ++ T A N+ + + ++ + E
Sbjct: 484 GNLSSAASRIGDVVELINTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALA-EQT 542
Query: 339 TSNLNDSSQKFAELMSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ SQ+ + + + + + ++ T E+ I N+
Sbjct: 543 AKATGEISQQISGIQAATDQSVEDIRAIGGTIARISEIASTIASAVEEQGAATQEISRNV 602
Query: 398 QNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDIV--WGREKGSVK 446
Q +Q D+Q + + ++ + GR +V+
Sbjct: 603 QQAAQGTGQVSSNVVDVQRGASETGSASAQVLSAAQSLSQDSNRLKAEVGRFLSTVR 659
>gi|314934754|ref|ZP_07842113.1| phage infection protein [Staphylococcus caprae C87]
gi|313652684|gb|EFS16447.1| phage infection protein [Staphylococcus caprae C87]
Length = 950
Score = 40.7 bits (92), Expect = 0.51, Method: Composition-based stats.
Identities = 40/429 (9%), Positives = 121/429 (28%), Gaps = 32/429 (7%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR--I 68
+++ L W + +D G + + + G VR I VG +
Sbjct: 23 VILAGLAILPSFYAWFNLWAMWDPYGNTGHIKVAVVNEDSG----DKVRGKKINVGDTMV 78
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
L + I+ YI + T+ +
Sbjct: 79 KSLK---NNDSF-------DWQFVSREKADHEIKMGKYYAGIYIPSKFTHQVAGTLRKHP 128
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ + + + + +++ ++ + + + + + + +E
Sbjct: 129 QKADVNFKVNQKINAVAAKLTDTGSSLVVEKANEQFNKTVTKALLTEANKVGLTLEDNVP 188
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ + + + +D N D + + + K N
Sbjct: 189 TITKIKNAVYQANDALPKINDFADKVIYLNNHQDELDQYANKFRDLGKYKANITDAQ--- 245
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + + + + +++ + + I+ LL+ S+ + +
Sbjct: 246 ---DKLNAVNSAVPALNEKAKLILALNDYMPNIERLLNVASNDVPA--------QFPKIN 294
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ + I + Q + + + +++ + E+ +N +
Sbjct: 295 KGVDIASEGIDVASSQLNDAQGYLTQAKQRVKDYQEAAGRAQEVNGAVNKDLNNQTTTQQ 354
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
Q S + +IG++ N S ND++++ L E++ + +
Sbjct: 355 QSATQSHKDQGHSYSNIKTSQMSTIGDSSNNDSDLTQNDVKSMNTALTESLLSLSNQTDK 414
Query: 429 FERNPQDIV 437
+ Q +
Sbjct: 415 QAQATQQDI 423
>gi|254831215|ref|ZP_05235870.1| transmembrane protein [Listeria monocytogenes 10403S]
Length = 927
Score = 40.7 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 38/415 (9%), Positives = 112/415 (26%), Gaps = 24/415 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG--I 63
+ FVV + ++ ++L G ++ + + + V +NG +
Sbjct: 14 NKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDK------PVDYNGQTM 67
Query: 64 PVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + L ++E + L+K + + L K+
Sbjct: 68 DVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMVVTIPKDFSKNAASVLDKDPKKM 127
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ ++ + S +E +++ + I I+
Sbjct: 128 ELSYKT---NGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAAD 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
I L + + + SS + ++ ++
Sbjct: 185 GSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDK 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + D V + +D L +
Sbjct: 245 LNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAY--------- 295
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + ++ + ++ + ++ +L D S K + + +++
Sbjct: 296 TGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDG--N 353
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L + ++ M+ + +++N+ + L + + +L L
Sbjct: 354 LTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLT 408
>gi|83815128|ref|YP_445929.1| hypothetical protein SRU_1812 [Salinibacter ruber DSM 13855]
gi|83756522|gb|ABC44635.1| hypothetical protein SRU_1812 [Salinibacter ruber DSM 13855]
Length = 1242
Score = 40.7 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 26/379 (6%), Positives = 93/379 (24%), Gaps = 19/379 (5%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
S + ++ + S G+S +R+ +D +
Sbjct: 404 SATGRFRLRREDTYALRLESAGGISNRDPIRY-----------EVDLQTDARPSVSF--- 449
Query: 89 PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFI 148
L P + + + +F T+ ++
Sbjct: 450 ----LNPGDPTELTPDLTQPLRVQLSDDYGFRRAALFYRRTDGGGADSSFSSIDLPLPDG 505
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
A+ ++ + + + + + + + ++
Sbjct: 506 RAADQVLSHTWLLAQ-ESGLDLERGDEVAYYVKAWDNDTVNGPKGGRTATQRLRFPSLSE 564
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
+ + + L++ K + Q + E + ++
Sbjct: 565 QYEELDTLQQKTGEQMQELNRRSKDVQQQFQDLRREVRRTREADWEDQRQLERLQQRQQS 624
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ Q + + S ETS + + + M S ++
Sbjct: 625 LSQSKSSLSRQVDSLNREMQRNDLSSPETSKKFQELKQTIDEMESKDLQKALENMRQSMQ 684
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ +++ ++ + + + N+ + ++ R R +++ +
Sbjct: 685 DQSFRQMQSAMEQAQSRLEQQEQQLERTLNLFKQLKARQKMEELSRRAEDIRKREDQVAQ 744
Query: 389 YIPSIGNNLQNFSQSGLND 407
+ + +G +
Sbjct: 745 ETSERMDASSDADSTGQSQ 763
>gi|47097338|ref|ZP_00234893.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|254901114|ref|ZP_05261038.1| transmembrane protein [Listeria monocytogenes J0161]
gi|254914036|ref|ZP_05264048.1| conserved hypothetical protein [Listeria monocytogenes J2818]
gi|254938351|ref|ZP_05270048.1| transmembrane protein [Listeria monocytogenes F6900]
gi|47014289|gb|EAL05267.1| membrane protein, putative [Listeria monocytogenes str. 1/2a F6854]
gi|258610964|gb|EEW23572.1| transmembrane protein [Listeria monocytogenes F6900]
gi|293592055|gb|EFG00390.1| conserved hypothetical protein [Listeria monocytogenes J2818]
Length = 927
Score = 40.7 bits (92), Expect = 0.52, Method: Composition-based stats.
Identities = 38/415 (9%), Positives = 112/415 (26%), Gaps = 24/415 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG--I 63
+ FVV + ++ ++L G ++ + + + V +NG +
Sbjct: 14 NKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDK------PVDYNGQTM 67
Query: 64 PVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + L ++E + L+K + + L K+
Sbjct: 68 DVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMVVTIPKDFSKNAASVLDKDPKKM 127
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ ++ + S +E +++ + I I+
Sbjct: 128 ELSYKT---NGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAAD 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
I L + + + SS + ++ ++
Sbjct: 185 GSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDK 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + D V + +D L +
Sbjct: 245 LNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAY--------- 295
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + ++ + ++ + ++ +L D S K + + +++
Sbjct: 296 TGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDG--N 353
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L + ++ M+ + +++N+ + L + + +L L
Sbjct: 354 LTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLT 408
>gi|293392034|ref|ZP_06636368.1| mce related protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952568|gb|EFE02687.1| mce related protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 885
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 30/112 (26%), Gaps = 3/112 (2%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTAT 100
+ ++ S + + G+ VG I L L+ LI P + ++
Sbjct: 755 VLETNDALNITAGSPIMYRGVEVGTIKNLELNSLGDR-VFINILIAPKYQHLVRQNSEFW 813
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
I + + + + + + + + +
Sbjct: 814 IASGYDFNLGWSGAQFNTGSVQQLLKGGISFSTPSGTVVQGQVKANQHFLLQ 865
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 10/102 (9%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + F+ + F V I + DG+ + +R+
Sbjct: 24 NRRISPFWLLPFIALCISAILFF-------QIVQEQGISVKITFT-NGDGIVAGKTQIRY 75
Query: 61 NGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATI 101
G+ +G + + + +A T L +T +
Sbjct: 76 QGLQIGVVKKVNFTDDLQKVEVVANIYPEAKTVLRENTKFWL 117
>gi|284802802|ref|YP_003414667.1| transmembrane protein [Listeria monocytogenes 08-5578]
gi|284995944|ref|YP_003417712.1| transmembrane protein [Listeria monocytogenes 08-5923]
gi|284058364|gb|ADB69305.1| transmembrane protein [Listeria monocytogenes 08-5578]
gi|284061411|gb|ADB72350.1| transmembrane protein [Listeria monocytogenes 08-5923]
Length = 927
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 38/415 (9%), Positives = 112/415 (26%), Gaps = 24/415 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG--I 63
+ FVV + ++ ++L G ++ + + + V +NG +
Sbjct: 14 NKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDK------PVDYNGQTM 67
Query: 64 PVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + L ++E + L+K + + L K+
Sbjct: 68 DVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMVVTIPKDFSKNAASVLDKDPKKM 127
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ ++ + S +E +++ + I I+
Sbjct: 128 ELSYKT---NGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAAD 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
I L + + + SS + ++ ++
Sbjct: 185 GSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDK 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + D V + +D L +
Sbjct: 245 LNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAY--------- 295
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + ++ + ++ + ++ +L D S K + + +++
Sbjct: 296 TGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDG--N 353
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L + ++ M+ + +++N+ + L + + +L L
Sbjct: 354 LTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLT 408
>gi|118388946|ref|XP_001027566.1| Oxalate/Formate Antiporter protein [Tetrahymena thermophila]
gi|89309336|gb|EAS07324.1| Oxalate/Formate Antiporter protein [Tetrahymena thermophila SB210]
Length = 670
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 52/453 (11%), Positives = 112/453 (24%), Gaps = 35/453 (7%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRI-PGSVDG--LSTDS- 56
M+ K T +G F++ ++ + F + + G LS
Sbjct: 5 MKQKGIITLIGGFMLELVTGTAFL---------WGQFNVYITSYFRQKDDSGLELSVGGA 55
Query: 57 --SVRFN----GIPVGRIVGLFLDQE--------YPNHSLAKALIRPDTPLYPSTTATIR 102
V GIP+G I G+ +L+ + +
Sbjct: 56 IFPVMMASLALGIPMG-IKGIKFFGSARLCCIFCSFFAALSVFVASYTQKFWQFVLIYGV 114
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
G+A + A S I A +
Sbjct: 115 VHGIAQGAVYFIPIYMGYLFFPTNKGMVSGIVTCGFALTSFAFGMIFFAIVNPNGLVQIQ 174
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+ + +
Sbjct: 175 DSDGFSYFQGPSVQVAKNVPESLRKLSYMYVCIAFFSSLLILYHPNQIGEEEKRLKLELK 234
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
K++++ + + ++I + + N + VR++ Q F + +D
Sbjct: 235 NKQEEKKILESNLSRLQQRDEQSIPKPEQINTEKVENQQNEMSSVRKSIQLFNKTIGIVD 294
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
K++ + ++ + + +Q + NT E N
Sbjct: 295 LEQQVIKKKIELTQKQEKQQSYRIILPHQNIQNDKEIQQYNQLFQNKMYSNTNEKKNYNE 354
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS- 401
N+ S + S + +S + L K + D ++ +Q+ S
Sbjct: 355 NEQSVNYEN-NSLLRVVSKDIKVMDLNKRIVSIVQNQND--DRAQDKPQHTNELVQDSSI 411
Query: 402 ---QSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+DI ++Q+ + F ER
Sbjct: 412 DHISKINDDINQKENQVQDELQSFFSLEMEIER 444
>gi|122890803|emb|CAM14143.1| myosin heavy chain 4 [Danio rerio]
Length = 1935
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 30/324 (9%), Positives = 93/324 (28%), Gaps = 17/324 (5%)
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ A + F E +S +R Q + IE+ ++ + +
Sbjct: 1272 INDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEVKAKNAL 1331
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S + ++K S + Q E ++ S
Sbjct: 1332 AHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEES 1391
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENI 304
+ + + V + ++ Q++ + D + + N
Sbjct: 1392 KKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNF 1451
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-L 362
+ + + + QK ++ + + ++ ++ + L + N+ +
Sbjct: 1452 DKVLAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSYEETLDQLETLKRENKNLQQEI 1511
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR--------- 413
+ + +++H + + I L+ + ++ ++R
Sbjct: 1512 SDLTEQIGETGKSIHELEKAKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVK 1571
Query: 414 -KLQETVNHFDDCLNNFERNPQDI 436
++ + D+ + +RN Q +
Sbjct: 1572 GEIDRKLAEKDEEIEQIKRNSQRV 1595
>gi|66472732|ref|NP_001018321.1| myosin heavy chain 4 [Danio rerio]
gi|63021932|gb|AAY26547.1| fast myosin heavy chain 4 [Danio rerio]
Length = 1935
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 30/324 (9%), Positives = 93/324 (28%), Gaps = 17/324 (5%)
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ A + F E +S +R Q + IE+ ++ + +
Sbjct: 1272 INDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEVKAKNAL 1331
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S + ++K S + Q E ++ S
Sbjct: 1332 AHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEES 1391
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENI 304
+ + + V + ++ Q++ + D + + N
Sbjct: 1392 KKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNF 1451
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-L 362
+ + + + QK ++ + + ++ ++ + L + N+ +
Sbjct: 1452 DKVLAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSYEETLDQLETLKRENKNLQQEI 1511
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR--------- 413
+ + +++H + + I L+ + ++ ++R
Sbjct: 1512 SDLTEQIGETGKSIHELEKAKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVK 1571
Query: 414 -KLQETVNHFDDCLNNFERNPQDI 436
++ + D+ + +RN Q +
Sbjct: 1572 GEIDRKLAEKDEEIEQIKRNSQRV 1595
>gi|186686374|ref|YP_001869570.1| helicase domain-containing protein [Nostoc punctiforme PCC 73102]
gi|186468826|gb|ACC84627.1| helicase domain protein [Nostoc punctiforme PCC 73102]
Length = 1103
Score = 40.7 bits (92), Expect = 0.53, Method: Composition-based stats.
Identities = 37/420 (8%), Positives = 114/420 (27%), Gaps = 40/420 (9%)
Query: 65 VGRIVGLFLDQEYPNHSL----AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G++ + + + ++ PL + + Q I
Sbjct: 17 IGKVTEIS---DTNANVEYFCSIGQRLQKTLPLSSLSEVRLEPQARCYIKSQTQDKWIVG 73
Query: 121 KKTIFQIATE-------------RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ I+ TE + + I +
Sbjct: 74 RVFIWDEDTEMYQIDLPDKKTAIATEEDIYVRCNLPNTDPIETLAMKGHETPYFHDKRLA 133
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSL 227
++++ K + IS + ++ + + + +
Sbjct: 134 FVKSLIKQRAVSRGMTGLISANINLYPHQVEVVRRVLEDPIQRYLLADEVGLGKTIEAGA 193
Query: 228 DKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD 287
+D K ++ Q + + H + E KI+ L +
Sbjct: 194 ILRQFLLDEPKRGAVVLVPQYLLKQWRTELENKFYISHFGKRVAVLAVEDIHKIN-LKAR 252
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + + + + + ++ + + N +
Sbjct: 253 IGCLILDEAHHIAAMATSKDATVRQRFQTCKELAHKSDRLLLLSATPVLNHEQDFLAMLH 312
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI---------------NRYIPS 392
KI +++ + ++ R + +F++ +E ++Y+
Sbjct: 313 LLDPATYKIGDLAGFRAKVESRQEIGRLLLSFKEGAEPAVLKSNLQQLRNLVTEDKYLQK 372
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN----PQDIVWGREKGSVKIY 448
+ ++L+N Q+ + +V+ ++ V+ RN +D+++ R + Y
Sbjct: 373 LADDLENCLQANSTEQDQIVQAIRTHVSDIYRLHRRMLRNRRAAVEDVIFDRNFTPKEEY 432
>gi|209528110|ref|ZP_03276586.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
CS-328]
gi|209491469|gb|EDZ91848.1| efflux transporter, RND family, MFP subunit [Arthrospira maxima
CS-328]
Length = 553
Score = 40.7 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 18/261 (6%), Positives = 62/261 (23%)
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
V + + ++K+ T+ + + ++ +
Sbjct: 49 PMVAHRVYHRKPNSLQMVEALTVPVEAKDLTVTVRASGVVQPVRRVNLSPKTQGRLAQLY 108
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
+ +++ Q ++ L+ + + ++ +
Sbjct: 109 VEQGDRVEAGQIIARMESNELEAQRLQAQARLERTQANLAKLRQGSRPEAIASARARLER 168
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+ + + + R+ I + + + S+I A E
Sbjct: 169 AIARLAELQAGTRQEEIAVASARLREAEIRLFDARSGSLQNEIDQAQSRIQANLAELELA 228
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
+ + SE L+ + L + + + +
Sbjct: 229 QGRVQRYEELKSQGAVSEDTLDGYRRDQRRLEALQDEAKQRLAQLQENRRSQIERLEATV 288
Query: 427 NNFERNPQDIVWGREKGSVKI 447
+N Q + G ++
Sbjct: 289 EQERQNLQQLQNGTRPEVIRQ 309
>gi|254826815|ref|ZP_05231502.1| transmembrane protein [Listeria monocytogenes FSL N3-165]
gi|258599192|gb|EEW12517.1| transmembrane protein [Listeria monocytogenes FSL N3-165]
Length = 927
Score = 40.7 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 38/415 (9%), Positives = 112/415 (26%), Gaps = 24/415 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG--I 63
+ FVV + ++ ++L G ++ + + + V +NG +
Sbjct: 14 NKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDK------PVDYNGQTM 67
Query: 64 PVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + L ++E + L+K + + L K+
Sbjct: 68 DVGDQLVTKLKSNKELDWNFLSKEEAEQGLKDGKYYMVVTIPKDFSKNAASVLDKDPKKM 127
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
+ ++ + S +E +++ + I I+
Sbjct: 128 ELSYKT---NGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAAD 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
I L + + + SS + ++ ++
Sbjct: 185 GSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDK 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + D V + +D L +
Sbjct: 245 LNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAY--------- 295
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + ++ + ++ + ++ +L D S K + + +++
Sbjct: 296 TGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDG--N 353
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L + ++ M+ + +++N+ + L + + +L L
Sbjct: 354 LTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLT 408
>gi|47213413|emb|CAF96073.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2604
Score = 40.7 bits (92), Expect = 0.54, Method: Composition-based stats.
Identities = 31/291 (10%), Positives = 87/291 (29%), Gaps = 10/291 (3%)
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ ++I + + + ++ E M
Sbjct: 1271 QQIDELKRQIEEEVKAKNALAHGLQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVA 1330
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T K A LQ+ + +E + + K+ ++ + V D+
Sbjct: 1331 QWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQSEVEDLM 1390
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ + +D +F ++ + E A+ + + S E+ +
Sbjct: 1391 IDVERANGLAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLGTELFKMKNSY 1449
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
++ +E + + Q+ ++L +I E + ++A +I
Sbjct: 1450 EEALDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKQVETEKAEIQT 1503
Query: 389 YIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L++ L ++ + ++ + D+ + +RN Q +
Sbjct: 1504 ALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEIEQIKRNSQRV 1554
>gi|17561652|ref|NP_505094.1| MYOsin heavy chain structural genes family member (myo-5)
[Caenorhabditis elegans]
gi|10864419|gb|AAG24132.1| Hypothetical protein F58G4.1 [Caenorhabditis elegans]
Length = 1974
Score = 40.7 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 34/286 (11%), Positives = 96/286 (33%), Gaps = 9/286 (3%)
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
++ ++++ + +++ T A IE A + + S + +
Sbjct: 1147 NEMQMELEELGDRLDEAGGATQAQIELNKKREAELAKLRQDLEDAAINSETSMAALRKKH 1206
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
S K+ + + Q + +S+D + + +
Sbjct: 1207 NDAVAELSDQLDTIQKMRGKLEREKNDKQREVDELQQSADVEAKQRQNCERMAKQLEAQL 1266
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
+ L SD +++ + T + ++ R A ++ + + +E +
Sbjct: 1267 TDM-TLKSDEQARLIQELTMGKNKVHNENQDLNRQLEDAEAQLCALNRIKQQQHSQLEEL 1325
Query: 339 TSNLNDSSQKFAELMSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
L+ +++ L S+++N ++ ++ Q A + K N I
Sbjct: 1326 KRTLDQETRERQSLHSQVSNYQLECEQFRESLEEEQDAKTDVQRQLSKANSEIQQWRAKF 1385
Query: 398 QNFSQSGLNDIQNL-------VRKLQETVNHFDDCLNNFERNPQDI 436
+ S +++ V+++QE + + + + E+N Q +
Sbjct: 1386 EGEGVSRAEELEETRRKLTHKVQEMQEQLENANQKIGTLEKNKQRL 1431
>gi|261868422|ref|YP_003256344.1| mce-like protein [Aggregatibacter actinomycetemcomitans D11S-1]
gi|261413754|gb|ACX83125.1| mce related protein [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 885
Score = 40.7 bits (92), Expect = 0.55, Method: Composition-based stats.
Identities = 11/112 (9%), Positives = 30/112 (26%), Gaps = 3/112 (2%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTAT 100
+ ++ S + + G+ VG I L L+ LI P + ++
Sbjct: 755 VLETNDALNITAGSPIMYRGVEVGTIKNLELNSLGDR-VFINILIAPKYQHLVRQNSEFW 813
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAE 152
I + + + + + + + + +
Sbjct: 814 IASGYDFNLGWSGAQFNTGSVQQLLKGGISFSTPSGTVVQGQVKANQHFLLQ 865
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 10/102 (9%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
+ + F+ + F V I + DG+ + +R+
Sbjct: 24 NRRISPFWLLPFIALCISAILFF-------QIVQEQGISVKITFT-NGDGIVAGKTQIRY 75
Query: 61 NGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATI 101
G+ +G + + + +A T L +T +
Sbjct: 76 QGLQIGVVKKVNFTDDLQKVEVVANIYPEAKTVLRENTKFWL 117
>gi|220941697|emb|CAX15438.1| novel myosin family protein [Danio rerio]
Length = 1937
Score = 40.7 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 33/293 (11%), Positives = 84/293 (28%), Gaps = 6/293 (2%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E ++I + + + ++ E M
Sbjct: 1308 QAFTQQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1428 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-TFRDTS 383
+ T++ +E + + Q+ ++L +I K A +
Sbjct: 1487 KNSYEETLDQLETLKRENKNLQQEISDLTEQIGETGKSIHELEKSKKAVETEKAEIQTAL 1546
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
E+ + + + ++ + ++ + D+ + +RN Q I
Sbjct: 1547 EEAEGTLEHEESKILRVQL----ELNQVKSEIDRKLAEKDEEIEQIKRNSQRI 1595
>gi|91974816|ref|YP_567475.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
gi|91681272|gb|ABE37574.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
Length = 563
Score = 40.7 bits (92), Expect = 0.56, Method: Composition-based stats.
Identities = 18/202 (8%), Positives = 51/202 (25%), Gaps = 6/202 (2%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
E + S + + + + + + + + ++ T A
Sbjct: 348 SATEEMSSSITEISRQVQESARIASEAVDQARKTNDSVGMLSAAAARIGDVVELINTIAG 407
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
N+ + + ++ + + + Q + + ++S
Sbjct: 408 QTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQITGIQSATVQSVS 467
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------DIQNLVRK 414
A+KE T E+ I N+Q +Q D+Q +
Sbjct: 468 AIKEIGQTIDRMSEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSANITDVQRGATE 527
Query: 415 LQETVNHFDDCLNNFERNPQDI 436
+ ++ +
Sbjct: 528 TGSASTQVLSAAKSLSQDSNRL 549
>gi|87116410|dbj|BAE79361.1| myosin heavy chain embryonic type 1 [Cyprinus carpio]
Length = 1932
Score = 40.3 bits (91), Expect = 0.58, Method: Composition-based stats.
Identities = 30/325 (9%), Positives = 93/325 (28%), Gaps = 17/325 (5%)
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ A + F E +S +R Q + E+ ++ + +
Sbjct: 1269 INDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQTEELKRQIEEEVKAKNAL 1328
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S + ++K S + Q E ++ S
Sbjct: 1329 AHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEES 1388
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENI 304
+ + + V + ++ Q++ + D + + N
Sbjct: 1389 KKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNF 1448
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-L 362
+ + + + QK ++ + + ++ +S + L + N+ +
Sbjct: 1449 DKVLAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSYEESLDQLETLKRENKNLQQEI 1508
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR--------- 413
+ + +++H + + I L+ + ++ ++R
Sbjct: 1509 SDLTEQLGETGKSIHELEKAKKAVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVK 1568
Query: 414 -KLQETVNHFDDCLNNFERNPQDIV 437
++ + D+ + +RN Q ++
Sbjct: 1569 GEIDRKLAEKDEEMEQIKRNSQRVI 1593
>gi|302523420|ref|ZP_07275762.1| CBP protein [Streptomyces sp. SPB78]
gi|318058183|ref|ZP_07976906.1| putative cellobiose ABC transporter solute-binding protein
[Streptomyces sp. SA3_actG]
gi|318077829|ref|ZP_07985161.1| putative cellobiose ABC transporter solute-binding protein
[Streptomyces sp. SA3_actF]
gi|302432315|gb|EFL04131.1| CBP protein [Streptomyces sp. SPB78]
Length = 439
Score = 40.3 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 33/364 (9%), Positives = 98/364 (26%), Gaps = 20/364 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL-YP 95
+++ S GL V G+ VGR+ + D + + D + +
Sbjct: 87 DYYPKLLQQLNSNSGL--GDVV---GVEVGRVKEVT-DTQADKFVDLSKSVNVDDWVSWK 140
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT- 154
AT + + G ++ +F+ A + R + +G
Sbjct: 141 EKQATTKDGAVIGAGTDIGPMSLCYRRDLFEQAGLPDDRETVARAVAGGWEDYIKLGQEY 200
Query: 155 -------SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + +S ++ + + + ++ + +++
Sbjct: 201 KKKAPKGTYFMDSASAMFNAVVSSNAEQYYDKSGKAIYKDSASVKQGWNLAAEVADKKLS 260
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ ++ + T A +++ + + K+
Sbjct: 261 QGLAQFQDPWTNALRKGTIATVACPAWMAAQISTNSGDAFKGKWDIAKAPGDTAANWGGS 320
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ + ++ L+ ++ + +T + + + +
Sbjct: 321 FLSVPKGGKHVKEATELVKWLTAPEQQAKTFKAVGIFPSNKKAYDLADVKSATLPYFNNA 380
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
I I E K A + +I+ E D ++ ++ I+
Sbjct: 381 PIGEIYAAEAQAIPEAVLGAKDASIKDEISKQINNMEQRGTKPD-----DAWKAATQTID 435
Query: 388 RYIP 391
+ I
Sbjct: 436 KSIG 439
>gi|149030540|gb|EDL85577.1| rCG51764, isoform CRA_b [Rattus norvegicus]
Length = 2399
Score = 40.3 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 27/337 (8%), Positives = 87/337 (25%), Gaps = 13/337 (3%)
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
Q + P + A + +S + E
Sbjct: 10 CHHAPPPCWAHHAPRQSPRQPSSRERRPPERAGSWAVAAEEEEAVSSAPWMRHYFGEEDG 69
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + T +S ++ + + P L+ +
Sbjct: 70 EMVPRTSNAAAFLSDTKDRGPPVQSQVWRSAEKVPFGQAHSLRAFEKPPLVQTQALRDFE 129
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
L + + ++++ + Q + + + E+ +++ L + + +
Sbjct: 130 KHLNDLKKENFSLKLRIYFLEERMQQKYEVSRE--DVYKRNIELKVEVESLKRELQDRKQ 187
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ E +S + + N I+ + + + ++
Sbjct: 188 HLHKTWADEEDLNSQNEAELRRQVEEPQQETEHVYELLDNNIQLLQEESRFAKDEATQME 247
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
+ + N L + + A D + + + L +
Sbjct: 248 TLVEAEKGC--NLELSERWKDATKNREDAPGDQVKL---------DQYSAALAQRDRRIE 296
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+L++++ + + R Q ++ E+ +P
Sbjct: 297 ELRQSLAAQEGLVEQLSREKQQLLHLLEEPGGMEVQP 333
>gi|125979081|ref|XP_001353573.1| GA19059 [Drosophila pseudoobscura pseudoobscura]
gi|54642337|gb|EAL31086.1| GA19059 [Drosophila pseudoobscura pseudoobscura]
Length = 702
Score = 40.3 bits (91), Expect = 0.60, Method: Composition-based stats.
Identities = 33/390 (8%), Positives = 102/390 (26%), Gaps = 26/390 (6%)
Query: 69 VGLFLDQEYPNHSLA----------KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ LD + H T L + + G LR
Sbjct: 78 QNIELDGDDKGHFDVPSDISTISTNTVRTTAGTRLPKEFHGVVHSTPKGGSVEPPRPRLR 137
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
++ + + S+ + ++ + +I T+
Sbjct: 138 EDNILLEIDHYLDENNTNRWQQQPHHHQHHSDEHLRNFRVVHDGHPAATSLPSIRMTSTS 197
Query: 179 TIANIETISTVLANNIS------HIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ ++ + + ++ + + L +
Sbjct: 198 ASIEAARLPRGSLSDNNKLISLSDLWGKSCMGGTVIANNAPNPLLCSPSLKEEQLRRHHL 257
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+Q + L Q + ++ ++ + Q++ +L ++
Sbjct: 258 EKTVQTLQSQLLEYQQRISVAMEVDRSKDEALNRAEQAAANLNFEVQQLRDVLHRLEAER 317
Query: 293 KSKETSAFLENIADST-----SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
+ + + + D+ Q+ + S+
Sbjct: 318 SDSHGKMEALQHELAQAVGLATKFQERHEKMEADLDRHQQEAKEWDEKLEQLEMQLHGSK 377
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNF---SQSG 404
+ EL ++ L++ + Q + + E N + LQ++ +S
Sbjct: 378 RAEELSHA--ELNKLRDKFAKVDYQQEKLKAHIEELETENTTLRHQKEMLQDYHQKQKSR 435
Query: 405 LNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ ++ + +QET+ + + N ++ +
Sbjct: 436 ADSLETQRKSMQETLANLTEVETNLKKKLE 465
>gi|254819663|ref|ZP_05224664.1| mce related protein [Mycobacterium intracellulare ATCC 13950]
Length = 405
Score = 40.3 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 35/104 (33%), Gaps = 4/104 (3%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
+ +VS + + + +++ L ++ V+ G VG+
Sbjct: 3 LLLAAVMVSAGCATNGLASLPLPAPGLGSGGYSLNAVFSNALN-LPMNAKVKLAGADVGQ 61
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ + +L + IR L +TA +RT G +
Sbjct: 62 LESM---IARNYTALTRLRIRDGVQLPRGSTAELRTATPLGDVF 102
>gi|119568467|gb|EAW48082.1| laminin, alpha 2 (merosin, congenital muscular dystrophy), isoform
CRA_c [Homo sapiens]
Length = 3116
Score = 40.3 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
N ++ ++++ ++V ++ L + + + +
Sbjct: 1915 KNISFNATAAFKAYSNIKDYIDEAEKVAKEAKDLAHEATKLATGPRGLLKEDAKGCLQKS 1974
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL-F 369
R A + D ++ I + + L + +SA+ + +
Sbjct: 1975 FRILNEAKKLANDVKENEDHLNGLKTRIENADARNGDLLRTLNDTLGKLSAIPNDTAAKL 2034
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQ------NFSQSGLNDIQNLVRKLQETVNHFD 423
+ + DT++ + I + NL N + +V+ + + D
Sbjct: 2035 QAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVKDPSKNIADAD 2094
Query: 424 DCLNNFERNPQDIV 437
+ N E+ ++
Sbjct: 2095 ATVKNLEQEADRLI 2108
>gi|119568465|gb|EAW48080.1| laminin, alpha 2 (merosin, congenital muscular dystrophy), isoform
CRA_a [Homo sapiens]
Length = 2480
Score = 40.3 bits (91), Expect = 0.62, Method: Composition-based stats.
Identities = 20/194 (10%), Positives = 59/194 (30%), Gaps = 7/194 (3%)
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
N ++ ++++ ++V ++ L + + + +
Sbjct: 1915 KNISFNATAAFKAYSNIKDYIDEAEKVAKEAKDLAHEATKLATGPRGLLKEDAKGCLQKS 1974
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL-F 369
R A + D ++ I + + L + +SA+ + +
Sbjct: 1975 FRILNEAKKLANDVKENEDHLNGLKTRIENADARNGDLLRTLNDTLGKLSAIPNDTAAKL 2034
Query: 370 KDAQRAMHTFRDTSEKINRYIPSIGNNLQ------NFSQSGLNDIQNLVRKLQETVNHFD 423
+ + DT++ + I + NL N + +V+ + + D
Sbjct: 2035 QAVKDKARQANDTAKDVLAQITELHQNLDGLKKNYNKLADSVAKTNAVVKDPSKNIADAD 2094
Query: 424 DCLNNFERNPQDIV 437
+ N E+ ++
Sbjct: 2095 ATVKNLEQEADRLI 2108
>gi|260428555|ref|ZP_05782534.1| MotA/TolQ/ExbB proton channel family protein [Citreicella sp. SE45]
gi|260423047|gb|EEX16298.1| MotA/TolQ/ExbB proton channel family protein [Citreicella sp. SE45]
Length = 401
Score = 40.3 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 13/180 (7%), Positives = 46/180 (25%), Gaps = 4/180 (2%)
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
F ++ ++ S ++
Sbjct: 223 NRFYRELEEWLSTITKLSFSGDGDSAGDTGVVEQVLDQMTDQMERLTLMFARAQEGQNEV 282
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ + ++ +++ N+++ + E + + +
Sbjct: 283 DARLGQLADSVERMTERLEATAPSANSLARIAEGQERLAEVLAERDAAEGFDAESRMRLR 342
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
SI + + Q + +L+ ++ + L+ PQ +++ +PK
Sbjct: 343 SIDVQMLRLLEEISAGRQETMAELRTDLSSLNRTLSKLANQPQA----APSLTIRPARPK 398
>gi|330446009|ref|ZP_08309661.1| conserved protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490200|dbj|GAA04158.1| conserved protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 875
Score = 40.3 bits (91), Expect = 0.63, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
S + + G+ +G+I + LD + N +A A I P Y ++ + +
Sbjct: 298 GSPIMYRGLQIGKITDVSLD-DKTNKIVAHAAIEPSMREYLNSGSRL 343
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 36/135 (26%), Gaps = 3/135 (2%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-DQEYPNHSLAK 84
+ L + ++ M I+ +S + + + I VG++V + L D A+
Sbjct: 733 FKLGSAELFNSRMT--IVLESEERGSISEGTPLLYRDIQVGQVVNVSLGDLADRVIIKAQ 790
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + +T ++ I + ++ + P
Sbjct: 791 LEKQYSHLVRKNTVFWNKSGVNVDIGITGANIKAGTFDSLLRGGISFATPEQQPLEPKAK 850
Query: 145 NYFISNAENTSKKIS 159
Sbjct: 851 PGKHFLLHKEVNPKW 865
Score = 37.6 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 29/279 (10%), Positives = 69/279 (24%), Gaps = 3/279 (1%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGIT 110
G+ + +R+ G+ VGRI + L + N + S+ + A IT
Sbjct: 407 GIKRGTKLRYKGLTVGRITNVELSGDRVNF-DVLVQPEYTNLIRSSSRFFVDGGIDASIT 465
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
+ + A S + + + + + I E
Sbjct: 466 SRGVDVSIPPADQLISSAISFTSVGSSKINKSYTLFKNRSLADLADEKLKGYSTINLFAE 525
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDK--MMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + + + + D + + + ++
Sbjct: 526 KLPPVSEGSPVLYRNLQVGEVIDFALQDDGVNIKLNIEKKYRHLITSRTVFWNRSGIEVE 585
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ + L + + + + + + + + Q GQ I SD
Sbjct: 586 AGLNGVKLVTDPLSTLIKGGIAFDNMDQVSNRVGSKYKLYPSLSDAQHFGQLITLTASDA 645
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
S + E I + I +
Sbjct: 646 RSVSNNTEIKFQGVTIGQIINIEPDFHKGNVRIQARLYP 684
>gi|251810869|ref|ZP_04825342.1| cell wall associated fibronectin-binding protein [Staphylococcus
epidermidis BCM-HMP0060]
gi|251805549|gb|EES58206.1| cell wall associated fibronectin-binding protein [Staphylococcus
epidermidis BCM-HMP0060]
Length = 10182
Score = 40.3 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 38/370 (10%), Positives = 116/370 (31%), Gaps = 11/370 (2%)
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + P S A + + P I + + ++ +++ +
Sbjct: 3789 LTNDNPQVSQVTAALNKIKAVQPELDKAIA---MLKNKENNNALVQAKQQLQQIVNEVDP 3845
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ M T T + AE+ +K + + I I I+ +
Sbjct: 3846 TQGMTTDTANNYKSKKREAEDEIQKAQQIINNGDATEQQITNETNRVNQAINAINKAKND 3905
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ ++ + + D+ + + I+ ++ + ++ S+ +
Sbjct: 3906 LRADKSQLENAYNQLIQNVDTNGKKPASIQQYQAARQAIETQYNNAKSEAHQILENSNPS 3965
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + + + K ++ + + + + ++
Sbjct: 3966 VNEVAQALQKVEAVQLKVNDAIHILQNKENNSALVTAKNQLQQSVNDQPLTTGMTQDSIN 4025
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + E + + IN + ++D K + ++ +N+ A ++ + +
Sbjct: 4026 NYEAKRNEAQSAIRNAEAVINNGDATAKQISDEKSKVEQALAHLND--AKQQLTADTTEL 4083
Query: 373 QRAMHTFRDTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
Q A+ + N+ SI +L+ S ++ +++K TV ++ L
Sbjct: 4084 QTAVQQLNRRGDTNNKKPRSINAYNKAIQSLETQITSAKDNANAVIQKPIRTVQEVNNAL 4143
Query: 427 NNFERNPQDI 436
+ Q +
Sbjct: 4144 KQVNQLNQQL 4153
>gi|54023082|ref|YP_117324.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54014590|dbj|BAD55960.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 342
Score = 40.3 bits (91), Expect = 0.64, Method: Composition-based stats.
Identities = 30/284 (10%), Positives = 71/284 (25%), Gaps = 13/284 (4%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
+ +R DG++ + VR +G+ G + + D+ +
Sbjct: 39 GLRSEDGLRITLRTEQIGDGVTEGTQVRVDGVLAGEVTAIAPDERGTQRIDLRLDADALP 98
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
+ S L GI+ +EL + + + + +
Sbjct: 99 GIDDSLRLDYAPANLFGISELELLRGPGGAPLRAGTVVDLTGPRAGDVYDATMGAILRSL 158
Query: 152 ENTSKKISDS-------------SRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
+ + I T S +L N D
Sbjct: 159 SQVGETAFSPRLATVIAQISADVQAFTPLVQALITVARTIADHQTMPASELLGNLGPAFD 218
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
T D + + D + A+ + + + + +++D
Sbjct: 219 GGGEFAGATIRILDQFHDIRILRTDQNRYDVGVGALTGSILPGLATTVSTAGEELAEATD 278
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ + + + + G ++ LL + M L
Sbjct: 279 MLAPMLAVLAQMVPRPAQSGAELRELLGRLRAAMPETPDGPVLN 322
>gi|149030539|gb|EDL85576.1| rCG51764, isoform CRA_a [Rattus norvegicus]
Length = 2445
Score = 40.3 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 27/337 (8%), Positives = 87/337 (25%), Gaps = 13/337 (3%)
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
Q + P + A + +S + E
Sbjct: 10 CHHAPPPCWAHHAPRQSPRQPSSRERRPPERAGSWAVAAEEEEAVSSAPWMRHYFGEEDG 69
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + T +S ++ + + P L+ +
Sbjct: 70 EMVPRTSNAAAFLSDTKDRGPPVQSQVWRSAEKVPFGQAHSLRAFEKPPLVQTQALRDFE 129
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
L + + ++++ + Q + + + E+ +++ L + + +
Sbjct: 130 KHLNDLKKENFSLKLRIYFLEERMQQKYEVSRE--DVYKRNIELKVEVESLKRELQDRKQ 187
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ E +S + + N I+ + + + ++
Sbjct: 188 HLHKTWADEEDLNSQNEAELRRQVEEPQQETEHVYELLDNNIQLLQEESRFAKDEATQME 247
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
+ + N L + + A D + + + L +
Sbjct: 248 TLVEAEKGC--NLELSERWKDATKNREDAPGDQVKL---------DQYSAALAQRDRRIE 296
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+L++++ + + R Q ++ E+ +P
Sbjct: 297 ELRQSLAAQEGLVEQLSREKQQLLHLLEEPGGMEVQP 333
>gi|224499039|ref|ZP_03667388.1| transmembrane protein [Listeria monocytogenes Finland 1988]
Length = 927
Score = 40.3 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 40/415 (9%), Positives = 112/415 (26%), Gaps = 24/415 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG--I 63
+ FVV + ++ ++L G ++ + + + V +NG +
Sbjct: 14 NKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDK------PVDYNGQTM 67
Query: 64 PVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + L ++E + L+K + + S L K+
Sbjct: 68 DVGDQLVTKLKSNKELDWNFLSKEEAEQGL---KDGKYYMIVTIPKDFSKNAASVLDKDP 124
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
K + + S +E +++ + I I+
Sbjct: 125 KKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAAD 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
I L + + + SS + ++ ++
Sbjct: 185 GSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDK 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + D V + +D L +
Sbjct: 245 LNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAY--------- 295
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + ++ + ++ + ++ +L D S K + + +++
Sbjct: 296 TGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDG--N 353
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L + ++ M+ + +++N+ + L + + +L L
Sbjct: 354 LTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLT 408
>gi|254503435|ref|ZP_05115586.1| ammonium transporter, putative [Labrenzia alexandrii DFL-11]
gi|222439506|gb|EEE46185.1| ammonium transporter, putative [Labrenzia alexandrii DFL-11]
Length = 882
Score = 40.3 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 40/441 (9%), Positives = 118/441 (26%), Gaps = 34/441 (7%)
Query: 10 VGLFVVSI-LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR- 67
+G + F F++ W P + V GL+ +G +G
Sbjct: 376 IGAAAIFAWAFGVAFAVIWSVNKVWSGFPGGGFRVSEEDEVVGLNAAE----HGATLGTG 431
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
++ L + + A + + + + +T ++ + + +
Sbjct: 432 VLQGALKELAYSRVNLSARVDVE---HGDEAGELAFLFNRVMTRLQKMDDARRARRLHV- 487
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
+ K+S + + + + + T++
Sbjct: 488 -----------------ERARRTLDRIVTKLSGEMKDMMESQLDSLSAHSQTVSVEARRV 530
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ S + ++ K + + + + N
Sbjct: 531 KSTSAEASEGASSIGEASTHSRNAIEKTETAAEQLQHAMSEINQEVSSALEAMRYSANEA 590
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ + ++ + E + L + + + F +
Sbjct: 591 NMTRDAANRMKAASQSIEGLIGVITQISEQT-HLLALNATIEAARAGEAGRGFAVVAQEV 649
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ A E+T Q Q+I + + ++N S++++ KI+ + E N
Sbjct: 650 KDLAEQTSKASEEVTQQVQQIRAVSDELDNKVSSIHEQLSGADATADKIDRVL--VETNQ 707
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
+ ++ I + N + + +++ V+ +
Sbjct: 708 STGQITEDVRMLGGAAKDI-AVSAGVIGNTSGGMAEASDSLGQTAEQVEHAVSELRSAFD 766
Query: 428 NFERNPQDIVWGREKGSVKIY 448
DI+ G+++ +
Sbjct: 767 GL---LADILQGQDRRIFPRF 784
>gi|90193932|gb|ABD92527.1| RecN [Bibersteinia trehalosi]
Length = 444
Score = 40.3 bits (91), Expect = 0.65, Method: Composition-based stats.
Identities = 18/234 (7%), Positives = 68/234 (29%), Gaps = 1/234 (0%)
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
+ + + + D + +++ + +
Sbjct: 53 FSMQPTSPAYLWLAEHELLDEDNPSECILRRMINLEGRSKAFVNNRPIPASQLRELGQYL 112
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + Q + +++ L + + + + +++ +E
Sbjct: 113 IHLNGQHAPQLLLKSEYQLEVLDNYADIHTLLTQMAEQYQVWKKLNKQVKNFHQQCKENE 172
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT 382
++Q + ++ ++ + Q + N+ + S+
Sbjct: 173 ARKQLLQYQVDELDEFAIKAGEFEQLEEDQSRLANSEQLTALSQSVIGSLSDNDLNIDSM 232
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ R + + L QS L+ + + + ++QE + N E++P+ +
Sbjct: 233 LYRTIRELEELVE-LDTSYQSALDMLNDALIQIQEASSEIAQIATNIEQDPELL 285
>gi|320160305|ref|YP_004173529.1| putative two-component sensor histidine kinase [Anaerolinea
thermophila UNI-1]
gi|319994158|dbj|BAJ62929.1| putative two-component sensor histidine kinase [Anaerolinea
thermophila UNI-1]
Length = 791
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 36/325 (11%), Positives = 82/325 (25%), Gaps = 16/325 (4%)
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ I A P +Y + S +I++ EK + +
Sbjct: 220 LMYIQPPSQVTEWEPAEPMPEDYTHPVQSHALDIRIIHSWLDLSLIQDKEKLYSGIARAV 279
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
I+ I + D I L K +
Sbjct: 280 AQTMLADLCYIARIPENEFAPVPLTGGYDMVKDEPIPPVYIERGKIPAITASLTKGKSLR 339
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL------LSDFSSKMKSKET 297
N + + Q + + Q L + +
Sbjct: 340 VNFNELELPELDALAQALGLERAGNFLLIPLEHNHQPWGALLLLTPYSGRVWTVEDTTYL 399
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI- 356
+ + I + E RQ+ +E + + + L
Sbjct: 400 ATETDEIVRLLLERDRTPRGEDEALRLRQQNTLLQQELEQLRQSHQKLLAEVQTLRESTP 459
Query: 357 -NNISALKENNSLF---KDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLV 412
+ +A + +L ++ ++ + R + ++N + S + D L
Sbjct: 460 AESPAATAQIETLLKHQQEMEKILEDLRTENRRLNEALR-----TAQASPAVSGDAAQLE 514
Query: 413 RKLQETVNHFDDCLNNFERNPQDIV 437
++L+ T+ N R+ Q ++
Sbjct: 515 KELRLTLEEVAHLQNQLARSNQRVL 539
>gi|12657354|emb|CAC27778.1| myosin heavy chain [Notothenia coriiceps]
Length = 1932
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 22/293 (7%), Positives = 85/293 (29%), Gaps = 13/293 (4%)
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
Q++ E A V + + S+ +
Sbjct: 1300 TRSKQAFTQQVEEFKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKSELQRAM 1359
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ + + +Q+ ++ E+ + + + + + +T Q +
Sbjct: 1360 SKANSEVAQWRAKYETDAIQRTEELEESKKKLAQRLQDAEESIEAVNAKCASLEKTKQRL 1419
Query: 278 GQKIDHLLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI-NTI 335
+++ L+ D + + N + + + + K ++ +
Sbjct: 1420 LAEVEDLMIDVERANALAANLDKKQRNFDKVLAEWKQKYEESQAELEGSLKEARSLSTEM 1479
Query: 336 ENITSNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRAMHTFRD-------TSEKIN 387
+ ++ ++ L + N+ + + + + +H ++
Sbjct: 1480 FKLKNSYEEALDHLESLKRENKNLQQEISDLTEQIGENGKTLHELEKGKKILEIEKSELQ 1539
Query: 388 RYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ L++ L ++ + ++ + D+ ++ +RN Q ++
Sbjct: 1540 TSLEEAEATLEHEESKILRVQLELTQIKGEVDRKIAEKDEEIDQIKRNSQRVI 1592
>gi|322227645|gb|ADW95287.1| RecN [Actinobacillus muris]
Length = 449
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 16/234 (6%), Positives = 65/234 (27%), Gaps = 1/234 (0%)
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
+ + + D + +++ + +
Sbjct: 57 FLMQPDSPAYLWLKQHELLDEDNPQECILRRMITTEGRSKAFVNNQPLPISQLRELGQYL 116
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + Q + +++ + + + + + + +++ +E
Sbjct: 117 IHLNGQHAPQLLLKSDYQLELVDNYADNHALLAKMATQYAHWKTLHKQVKNFHQQCQENE 176
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT 382
++Q + ++ ++ + Q + N + S+
Sbjct: 177 ARKQLLQYQVDELDEFAIKQGEFEQLEEDQNRLANAEQLTALSQSVVDTLSENELNVDSM 236
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ R + + + + QS L + + ++QE + N E++P +
Sbjct: 237 IFRSIRDLEELAE-MDDRYQSALEMLNEALIQVQEASSEISQLAGNIEQDPALL 289
>gi|302023292|ref|ZP_07248503.1| membrane protein [Streptococcus suis 05HAS68]
gi|330832084|ref|YP_004400909.1| bacteriocin-associated integral membrane protein [Streptococcus
suis ST3]
gi|329306307|gb|AEB80723.1| bacteriocin-associated integral membrane protein [Streptococcus
suis ST3]
Length = 660
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G FV+ + WL +++ SV LS V ++ +
Sbjct: 3 GKFVLVSTIILAVFMIWLGV-----SQKETMLVHYYPSVTSLSVSEDVTYSDVR 51
>gi|223932718|ref|ZP_03624716.1| bacteriocin-associated integral membrane protein [Streptococcus
suis 89/1591]
gi|223898551|gb|EEF64914.1| bacteriocin-associated integral membrane protein [Streptococcus
suis 89/1591]
Length = 660
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G FV+ + WL +++ SV LS V ++ +
Sbjct: 3 GKFVLVSTIILAVFMIWLGV-----SQKETMLVHYYPSVTSLSVSEDVTYSDVR 51
>gi|91976937|ref|YP_569596.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
gi|91683393|gb|ABE39695.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB5]
Length = 561
Score = 40.3 bits (91), Expect = 0.66, Method: Composition-based stats.
Identities = 28/290 (9%), Positives = 75/290 (25%), Gaps = 10/290 (3%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
++ + + I + + + + S
Sbjct: 271 EQDRRLAAQRKQDLAKLAHDFEAAVGEVIQAVSSASTELEASATTLTSNAQHAQEVTTSV 330
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + ++Q V E + S + + + QT E ++
Sbjct: 331 AAASEQASANVQSVASATEEMASSVTEISRQVQESARIAQEAVGQAQTTNERVGELSAAA 390
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + T A N+ + + ++ + E +
Sbjct: 391 ARIGDVVDLINTIAGQTNLLALNATIEAARAGDAGRGFAVVASEVKALA-EQTAKATGEI 449
Query: 346 SQKFAELMSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
SQ+ + + + + +SA++E + T E+ I N+Q +Q
Sbjct: 450 SQQISGIQAATDQSVSAIREIGATISKMSEIASTIASAVEEQGAATQEISRNVQQAAQGT 509
Query: 405 LN------DIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GREKGSVK 446
D+Q + + + + G+ +V+
Sbjct: 510 QQVSSSVIDVQRGASETGSASGQVLSAAQSLANDSNRLKLEVGKFLETVR 559
>gi|9971579|dbj|BAB12571.1| myosin heavy chain [Pennahia argentata]
Length = 1930
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 89/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E ++I + + + ++ E M
Sbjct: 1301 QAFTQQIEELKRQIEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1360
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ + V
Sbjct: 1361 SEVAQWRSKYETDAIQRTEELEEAKKKLAQRLQDAEEQIEAVNSKCASLEKTKQRLQSEV 1420
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1421 EDLMIDVERANGLAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLGTELFKM 1479
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ +++ +E + + Q+ ++L +I E + ++A
Sbjct: 1480 KNSYEESLDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKQVETEKS 1533
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1534 EIQTALEEAEGTLEHEESKILRVQLELNQVKGEVDRKLAEKDEEMEQIKRNSQRVI 1589
>gi|16804398|ref|NP_465883.1| transmembrane protein [Listeria monocytogenes EGD-e]
gi|224503510|ref|ZP_03671817.1| transmembrane protein [Listeria monocytogenes FSL R2-561]
gi|16411848|emb|CAD00438.1| transmembrane protein [Listeria monocytogenes EGD-e]
Length = 927
Score = 40.3 bits (91), Expect = 0.67, Method: Composition-based stats.
Identities = 40/415 (9%), Positives = 112/415 (26%), Gaps = 24/415 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG--I 63
+ FVV + ++ ++L G ++ + + + V +NG +
Sbjct: 14 NKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDK------PVDYNGQTM 67
Query: 64 PVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + L ++E + L+K + + S L K+
Sbjct: 68 DVGDQLVTKLKSNKELDWNFLSKEEAEQGL---KDGKYYMIVTIPKDFSKNAASVLDKDP 124
Query: 122 KTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIA 181
K + + S +E +++ + I I+
Sbjct: 125 KKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKIKESGDGFAQAAD 184
Query: 182 NIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQ 241
I L + + + SS + ++ ++
Sbjct: 185 GSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYTDGVNTAAAGGDK 244
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ + + D V + +D L +
Sbjct: 245 LNAGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGINQAY--------- 295
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + ++ + ++ + ++ +L D S K + + +++
Sbjct: 296 TGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDG--N 353
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L + ++ M+ + +++N+ + L + + +L L
Sbjct: 354 LTDKQGKIAQLKQGMNDLQQGIDQLNQSVNGEDAALAKQLATLQKSLSDLQNGLT 408
>gi|134122722|dbj|BAF49658.1| myosin heavy chain [Saurida wanieso]
gi|156229670|dbj|BAF75972.1| myosin heavy chain fast skeletal type 1 [Saurida wanieso]
Length = 1936
Score = 40.3 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 89/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1307 QAFTQQIEELKRHVEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1366
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1367 SEVSQWRSKYETDAIQRTEELEEAKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEV 1426
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1427 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1485
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E+ + ++A T
Sbjct: 1486 KNSYEEALDQLETLKRENKNLQQEISDLTEQI------GESGKSIHELEKAKKTVETEKS 1539
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1540 EIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKRNSQRVI 1595
>gi|323492607|ref|ZP_08097751.1| methyl-accepting chemotaxis protein [Vibrio brasiliensis LMG 20546]
gi|323312982|gb|EGA66102.1| methyl-accepting chemotaxis protein [Vibrio brasiliensis LMG 20546]
Length = 467
Score = 40.3 bits (91), Expect = 0.69, Method: Composition-based stats.
Identities = 23/236 (9%), Positives = 73/236 (30%), Gaps = 8/236 (3%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + ++ + + K +++ N V +
Sbjct: 133 YYIMTFIGGAMFTMNKALNTLASGDLTSRMNFFKVRDEFSEIAITIDKVAEREQNMVISI 192
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+E+ Q++ ++ L + S+++ + + + + D +
Sbjct: 193 QESVALMQQISSDLN-LSNQQSAEVSGTQQEHLNSLASATEQMASTIREVATLAHDSSTQ 251
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKI 386
+ + + + ++L +I + S A+ E ++ + T SE+
Sbjct: 252 TEDARSVATQGQAKVGHTLNSISQLSKEIQSASEAVAELDANAAQIDEVVTTINGISEQT 311
Query: 387 NRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
N + + G ++++ L + Q+ + +RN Q +
Sbjct: 312 NLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQQATVEIQSMIEALQRNSQSL 367
>gi|323339708|ref|ZP_08079978.1| methyl-accepting chemotaxis protein [Lactobacillus ruminis ATCC
25644]
gi|323092787|gb|EFZ35389.1| methyl-accepting chemotaxis protein [Lactobacillus ruminis ATCC
25644]
Length = 731
Score = 40.3 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 47/436 (10%), Positives = 117/436 (26%), Gaps = 58/436 (13%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
+ + FV+ + + + S G
Sbjct: 333 NWIIIMAFVIMFIIVVLSGFIKKA----LRSGTKHFVDVFASSAKG-------------- 374
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
L L E + RK
Sbjct: 375 ----NLSLVPED----------------------------IGNDVSGAERFGRKLFVPAK 402
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
+ I N + SK ++ S + ++ + K I
Sbjct: 403 DGNEFGQIVYAYNMMVKSMVELIHNVQKQSKNVAQMSDSLLELSKQTGKATEEVSQTITG 462
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
I+ V ++ + + + D +T + I ++ ++++ +
Sbjct: 463 IADVTSSQAEETQESVTKLKELSEIIDQLHTNVISMNEEAKQSSEINQENMNTMDKVNSS 522
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ-----KIDHLLSDFSSKMKSKETSAF 300
+ K V +V++ T+ + + + L + + + F
Sbjct: 523 WSEELRSMEKLMHSVEEMNANVQDITKIINVINEISRQTNLLALNASIEAASAGEAGKGF 582
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
A+ S ++ +EI I + +++ + T+ + QK ++L+ K I
Sbjct: 583 SVVAAEIRKLAEQSAASTKEIEAIIADIQARSSSMVDQTNASLEGGQKQSKLIQK--AIK 640
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ E + + + S I + + L+N S S + ++
Sbjct: 641 STMEVFKRNQSMADGISNVKQASGNIEKVQNKVLEGLENISASTQENAAGT-EEVSANSE 699
Query: 421 HFDDCLNNFERNPQDI 436
++ F ++ D+
Sbjct: 700 EVLATMDEFTQHVSDL 715
>gi|21623523|dbj|BAC00871.1| myosin heavy chain [Oncorhynchus keta]
Length = 1937
Score = 40.3 bits (91), Expect = 0.71, Method: Composition-based stats.
Identities = 35/296 (11%), Positives = 88/296 (29%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E ++I + + + ++ E M
Sbjct: 1308 QAFTQQVEELKRQIEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E ++ K+ ++ V
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEETIEATNSKCSSLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1428 EDLMIDVERANAMAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSMSTELFKL 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1487 KNSYEEALDHLETLKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKS 1540
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q +V
Sbjct: 1541 EIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKIAEKDEEMEQIKRNSQRVV 1596
>gi|213026386|ref|ZP_03340833.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 225
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 10/31 (32%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
LS V F G VG + D +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKRT 197
>gi|190338446|gb|AAI63537.1| Myosin, heavy polypeptide 1, skeletal muscle [Danio rerio]
Length = 1937
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 84/293 (28%), Gaps = 6/293 (2%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E ++I + + + ++ E M
Sbjct: 1308 QAFTQQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1428 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-TFRDTS 383
+ T++ +E + + Q+ ++L ++ K A +
Sbjct: 1487 KNSYEETLDQLETLKRENKNLQQEISDLTEQLGETGKSIHELEKSKKAVETEKAEIQTAL 1546
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
E+ + + + ++ + ++ + D+ + +RN Q I
Sbjct: 1547 EEAEGTLEHEESKILRVQL----ELNQVKSEIDRKLAEKDEEIEQIKRNSQRI 1595
>gi|169259784|ref|NP_001108561.1| myosin, heavy polypeptide 1.1, skeletal muscle [Danio rerio]
gi|288856329|ref|NP_001124138.2| myosin, heavy polypeptide 1.1, skeletal muscle [Danio rerio]
gi|220941696|emb|CAX15437.1| novel myosin family protein [Danio rerio]
Length = 1937
Score = 40.3 bits (91), Expect = 0.72, Method: Composition-based stats.
Identities = 32/293 (10%), Positives = 84/293 (28%), Gaps = 6/293 (2%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E ++I + + + ++ E M
Sbjct: 1308 QAFTQQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1428 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-TFRDTS 383
+ T++ +E + + Q+ ++L ++ K A +
Sbjct: 1487 KNSYEETLDQLETLKRENKNLQQEISDLTEQLGETGKSIHELEKSKKAVETEKAEIQTAL 1546
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
E+ + + + ++ + ++ + D+ + +RN Q I
Sbjct: 1547 EEAEGTLEHEESKILRVQL----ELNQVKSEIDRKLAEKDEEIEQIKRNSQRI 1595
>gi|42527618|ref|NP_972716.1| HAMP domain-containing protein [Treponema denticola ATCC 35405]
gi|41818446|gb|AAS12635.1| HAMP domain protein [Treponema denticola ATCC 35405]
Length = 1526
Score = 40.3 bits (91), Expect = 0.73, Method: Composition-based stats.
Identities = 41/394 (10%), Positives = 105/394 (26%), Gaps = 20/394 (5%)
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + +++D + + + L + I+ L Y
Sbjct: 654 GEVTSIYVDADGLPPYDLTIEKKDFSVLSDKLISNIKINYLDPGKYYVGLMHSGRGVYFA 713
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
Q + I G Y + + I I +T +I +
Sbjct: 714 QKTISFDDIGNIKLGDYGKVYKYNWLLSAMDSDFSDYFLIICFTIFILLIMTLSITGVIY 773
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ ++ ++ + + M + V L+
Sbjct: 774 SVKEAIKIKYEVTVLLRGGAMSFGKEKKLSALKVRGGGLRLKFMMFTMTLIISVILTLDL 833
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + + + ++ + + + SA E
Sbjct: 834 PLGFRFSETQERLLAEGLASNTQVLLESLSSGAKAYLPSKNVLELGFLPSQVSALKEASF 893
Query: 306 DSTSNMRSSISAIREIT---DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ + + + + I+S I+T + + + + K++ I
Sbjct: 894 ATITGVHIDNKKVGYNFVWASNDEDILSKIDTPDFVVGKSELLLPQLENVYKKLDEIDK- 952
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN-- 420
+A+ ++ D + + I N S N+IQ+ + +++ ++
Sbjct: 953 --------EARDSVGEISDEIQSLTDMTMLIALNTDLKSVERRNEIQSAINQMETKLSSE 1004
Query: 421 ----HFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ E N + + R+ S YKP
Sbjct: 1005 LNGLSIKGSGSYPEFNSKKL--SRDITSYLFYKP 1036
>gi|321463376|gb|EFX74392.1| hypothetical protein DAPPUDRAFT_226732 [Daphnia pulex]
Length = 400
Score = 39.9 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 13/71 (18%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPG----SVD-GLSTDSSVR 59
T G+FV+ L + W+ + +A V + S+ GL V
Sbjct: 65 ANNTISGIFVIIGLAVA---DIWVCAAGLLAATLATVTASVFNQPWSSISNGL-----VT 116
Query: 60 FNGIPVGRIVG 70
+NG+ VG +
Sbjct: 117 YNGVLVGTVTA 127
>gi|289806374|ref|ZP_06537003.1| paraquat-inducible protein B [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 298
Score = 39.9 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 13/82 (15%), Positives = 21/82 (25%), Gaps = 1/82 (1%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLA 107
LS V F G VG + D + S D + + +
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSSFDPQKRTMSYQLFIKAPNDRLVTSNVRFWKDSGIAV 226
Query: 108 GITYIELSTLRKEKKTIFQIAT 129
+T + T+F
Sbjct: 227 DLTSAGMRVEMGSLTTLFGGGV 248
>gi|89074303|ref|ZP_01160793.1| hypothetical paraquat-inducible protein B [Photobacterium sp.
SKA34]
gi|89050007|gb|EAR55541.1| hypothetical paraquat-inducible protein B [Photobacterium sp.
SKA34]
Length = 875
Score = 39.9 bits (90), Expect = 0.74, Method: Composition-based stats.
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G + I +P + D + S + + G+ +G+I + LD E N +A A I P Y
Sbjct: 279 GRGIAITITLPDNSDISDSGSPIMYRGLQIGKITDVSLD-EKTNKIIAHAAIEPSMREYL 337
Query: 96 STTATI 101
++ + +
Sbjct: 338 NSGSRL 343
Score = 36.8 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ + I +V GL +++R+ G+ VG + + L ++ + A I P
Sbjct: 40 YKSVNEAGERIQIHFSDAV-GLVAGRTTIRYQGLEVGIVRDVSLSKDLKS-IYVTADIYP 97
Query: 90 DT--PLYPSTTATI 101
+ L +T +
Sbjct: 98 EAVNILRENTRFWL 111
>gi|222084704|ref|YP_002543233.1| methyl-accepting chemotaxis protein [Agrobacterium radiobacter K84]
gi|221722152|gb|ACM25308.1| methyl-accepting chemotaxis protein [Agrobacterium radiobacter K84]
Length = 781
Score = 39.9 bits (90), Expect = 0.75, Method: Composition-based stats.
Identities = 43/432 (9%), Positives = 126/432 (29%), Gaps = 39/432 (9%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDS---SVRFNG-- 62
G+ V++ + + ++ G + SV+ LS + V G
Sbjct: 324 IIGGILVLAAVMLALYAAVRRFVQKPLSG--------LVASVNSLSAGNYGEPVT--GQT 373
Query: 63 --IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
+G + L+ + AK T A + + G Y + +
Sbjct: 374 GTDEIGSVAK-ALEGFRFGLADAK---------RLETEADDQRRAAEGERYRSETERGET 423
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+I T Q + + + + +E + ++
Sbjct: 424 VALQRRIVTILGQSLAELSKGNLGHRIAEEFPGEYASLKQDFNEALASLEETVHTMNLSV 483
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
NI + ++N+ S + + + + + T ++ + A + +
Sbjct: 484 GNIGNGTGEISNSASDLARRTEQQAASLEQTAAALNQLTAQVNSSAENARTAASSVNAAS 543
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG--QKIDHLLSDFSSKMKSKETS 298
+ + S + + +V E+ + L + + +
Sbjct: 544 EDAGRSGEIVQKAIASMQGIEQSSQEVSRIISVIDEIAFQTNLLALNAGVEAARAGEAGR 603
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
F + + S +A +EI + ++ + ++ K AE + +IN+
Sbjct: 604 GFAVVAQEVRELAQRSANAAKEIKTLINTSAGQVKEGVDLVGHTGNALHKIAEQVMEINS 663
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
+ +++ ++ + + ++++ ++ + + + L +
Sbjct: 664 L--IRQISASASEQAIGLKEINAAVNQMDQVTQQNAAMVEETTAASVA--------LNDE 713
Query: 419 VNHFDDCLNNFE 430
+ F
Sbjct: 714 AQTLRALVARFR 725
>gi|328473636|gb|EGF44471.1| mce-related protein [Vibrio parahaemolyticus 10329]
Length = 882
Score = 39.9 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
++ +G M + GSV + V + + VG++ + L E+ + ++ I+
Sbjct: 744 KGFDRVEGVMFTLQSEQRGSV---QVGTPVLYRQMEVGQVTDVRL-GEFADRVVSTIKIK 799
Query: 89 PDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
P+ + ++ + I + ++ + + P+
Sbjct: 800 PEYAYLVRQNSVFWNVSGVDVSIGITGANIKAGTIDSLVRGGIAFSTPEQSQIPPAAKRG 859
Query: 147 FISNAENTSKKISDS 161
+ +
Sbjct: 860 HSFYLYPRADESWVQ 874
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIR 102
S + + + GI +G++ L L E LA A I+P L T +
Sbjct: 297 SEGAPIMYRGIEIGQVTDLSLS-EGREVILASAAIQPAFSDMLTTGTRFVLE 347
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVVK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLGSIYVDADIYPEATKLLNDKTRFWL 111
>gi|260901576|ref|ZP_05909971.1| mce family protein [Vibrio parahaemolyticus AQ4037]
gi|308108550|gb|EFO46090.1| mce family protein [Vibrio parahaemolyticus AQ4037]
Length = 882
Score = 39.9 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
++ +G M + GSV + V + + VG++ + L E+ + ++ I+
Sbjct: 744 KGFDRVEGVMFTLQSEQRGSV---QVGTPVLYRQMEVGQVTDVRL-GEFADRVVSTIKIK 799
Query: 89 PDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
P+ + ++ + I + ++ + + P+
Sbjct: 800 PEYAYLVRQNSVFWNVSGVDVSIGITGANIKAGTIDSLVRGGIAFSTPEQSQIPPAAKRG 859
Query: 147 FISNAENTSKKISDS 161
+ +
Sbjct: 860 HSFYLYPRADESWVQ 874
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIR 102
S + + + GI +G++ L L E LA A I+P L T +
Sbjct: 297 SEGAPIMYRGIEIGQVTDLSLS-EGREVILASAAIQPAFSDMLTTGTRFVLE 347
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVVK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLGSIYVDADIYPEATKLLNDKTRFWL 111
>gi|15384839|emb|CAC59753.1| myosin heavy chain [Paracirrhites forsteri]
Length = 1936
Score = 39.9 bits (90), Expect = 0.76, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 88/296 (29%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1308 QAFTQQIEELKRHVEEEVKAKNALAHGVQSSRHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1368 SEVAQWRSKYETDAIQRTEELEEAKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1428 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1487 KNSYEEALDHLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKT 1540
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1541 EIQSALEEAEGTLEHEEAKILRVQLELNQIKGEVDRKMAEKDEEMEQIKRNSQRVI 1596
>gi|325955600|ref|YP_004239260.1| DNA repair protein RecN [Weeksella virosa DSM 16922]
gi|323438218|gb|ADX68682.1| DNA repair protein RecN [Weeksella virosa DSM 16922]
Length = 550
Score = 39.9 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 26/220 (11%), Positives = 78/220 (35%), Gaps = 18/220 (8%)
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM--K 293
+++ + + + S + ++D Q++ +++ + S F++ +
Sbjct: 78 FFSEHELDYDQETIIRRELLPSGKSRAFINDTPVNINLLQKLSEQLIDIHSQFNTAKIIE 137
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ L+ A +++S + + ++ + + +N + ++ EL
Sbjct: 138 NNYQLHVLDAYAQDQLDIQSYQKEFTSYSLLQNEVELLKTQRQEMANNHDYNAYLLEELT 197
Query: 354 S---KINNISALKENNSLFKDAQRAMHTFRDTSEKINR-------YIPSIGNNLQNFSQ- 402
K + + L+E A+ + +TS + + L S
Sbjct: 198 KAELKKHELECLEEEAKTLSHAEDILANLAETSHLFQDEEFGLLTVLREVEQRLNKISSF 257
Query: 403 -----SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ N + +L++ + L++FE NP+ ++
Sbjct: 258 SENLSTLYNRLLTARIELEDVQQDLEGELSSFEANPERLI 297
>gi|297170705|gb|ADI21728.1| ATPase involved in DNA repair [uncultured actinobacterium
HF0130_15N16]
Length = 531
Score = 39.9 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 33/229 (14%), Positives = 80/229 (34%), Gaps = 14/229 (6%)
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
++ + E ++ + S + V E+G + L +
Sbjct: 60 DQALVEGRFETPEGAEIILKRVIPSKGRSRAYVDGSLAGASQLSEIGLSLVDLHGQHQHQ 119
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + ++R+ ISA E + +I + ++ + E
Sbjct: 120 SLLNPKTQRSALDVFAKIDLRALISARSECRRLQAEIEEMGGDAKARAREVDLLKFQIDE 179
Query: 352 LMS----KINNISALKENNSLFKDAQRAMHTFRDTSEKINR---YIPSIGNNLQNFSQSG 404
+ + + ++AL++ L +A+ + T E+I+ + IG +Q
Sbjct: 180 IAALSIQSPDELNALEKLEELLTNAEERIEAGGHTRERISGDGGLLDQIGETIQRLGDES 239
Query: 405 -LNDIQNLVRKLQETVNH----FDDCLNNFERNPQDI--VWGREKGSVK 446
+I +R +Q ++ + ++ E +PQ + V GR K ++
Sbjct: 240 PYREITERLRGIQAEMSDVSAILRERIDGIEDDPQRLMEVGGRRKSLIE 288
>gi|295401319|ref|ZP_06811291.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Geobacillus thermoglucosidasius C56-YS93]
gi|294976726|gb|EFG52332.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Geobacillus thermoglucosidasius C56-YS93]
Length = 657
Score = 39.9 bits (90), Expect = 0.78, Method: Composition-based stats.
Identities = 37/397 (9%), Positives = 109/397 (27%), Gaps = 13/397 (3%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+V + S V +NG PV + ++ + + R
Sbjct: 183 DAVTKIVNGSDVGYNGYPV--------LVDQSGIAIVH--PKYKGKDMSDNPSVKRMLAN 232
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y S K I + + S A + +
Sbjct: 233 KSGFYTYTSENEKRVMYFDTIPELGWKVGAVYKEKDLFAISNSLAVKMFTIAAIAILIGI 292
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
II + + + + ++ + +A + + + ++ N + I
Sbjct: 293 VIIYFLSRSIVKPLVALQHQTEKVAQGDLTVHVQVKSKDEIGQLANHFNYMTSQVREIIR 352
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
A + + + + + + + + E + ++ L
Sbjct: 353 QINESVAELAASADHLSAVSEETVATSEQVASAINDIAKGATEQAGDLDTINERTAALSQ 412
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ +S L N ++ + + + + + + + +E + ++L +
Sbjct: 413 QIETVTQSAANMQTLSN--ETKEASYNGLENLNVLQLKSDEAKKELFAVEKVMNDLVEKM 470
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRA-MHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+K E++ I IS +L + A + + + +
Sbjct: 471 KKIDEVIQTITAISGQTNLLALNASIEAARAGEHGKGFAVVAEEVRKLAEQSAKATDLIR 530
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
I + +++ + + +E+ Q + +
Sbjct: 531 QTIAMIQQQVDLAIQALSHSKDMYEQQQQAVHVTGDS 567
>gi|218184546|gb|EEC66973.1| hypothetical protein OsI_33633 [Oryza sativa Indica Group]
Length = 1033
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 13/122 (10%), Positives = 42/122 (34%), Gaps = 1/122 (0%)
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQR 374
+ Q++ + E + S +E ++ + A
Sbjct: 1 MQQEELEQKQKELKSFNLTFQEEQDKRMQAESALLSEGKELAQCQEEVQRLTKEIQMANE 60
Query: 375 AMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
++ + T + + + ++N ++ + + L+++L++ +N D N + Q
Sbjct: 61 KLNELKQTKVNLENAVSELKKEVENLTEQNRSS-ELLIQELRDEINSLKDSKNELQNEIQ 119
Query: 435 DI 436
+
Sbjct: 120 SL 121
>gi|114320277|ref|YP_741960.1| MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor
[Alkalilimnicola ehrlichii MLHE-1]
gi|114226671|gb|ABI56470.1| MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor
[Alkalilimnicola ehrlichii MLHE-1]
Length = 852
Score = 39.9 bits (90), Expect = 0.79, Method: Composition-based stats.
Identities = 22/184 (11%), Positives = 61/184 (33%), Gaps = 10/184 (5%)
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
++ + L + + + + + R + +++
Sbjct: 576 PLARALKQANEQLEPVHLHGLALTETEKGLTLDITVQSFREPTALQGMTMVVFREVTPQR 635
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA----QRAMHTFRDTSEKINR 388
S + AEL + I AL+E + +DA + + + + N
Sbjct: 636 TAQGQEGSQSAADAAHEAELQQYRDEIIALREEARVSRDALQSSNEELQSTNEELQSTNE 695
Query: 389 YIPSIGNNLQNFSQSGL---NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSV 445
+ + +Q+ ++ +++Q + L + + LN+ E I++ + +V
Sbjct: 696 ELTTSKEEMQSMNEELQTINSELQAKLDDLALAQSDMQNVLNSIEI---AILFLDQDLNV 752
Query: 446 KIYK 449
+ Y
Sbjct: 753 RRYT 756
>gi|326382395|ref|ZP_08204087.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
gi|326199125|gb|EGD56307.1| putative Mce family protein [Gordonia neofelifaecis NRRL B-59395]
Length = 345
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 39/108 (36%), Gaps = 13/108 (12%)
Query: 13 FVVSILFFSFFSIYWLS---------RSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
F ++ ++ S DG ++ + S L + V G+
Sbjct: 9 FGPMMVVLMAAMVFVTSCGINADNPPTIGTSDGNGYDIEMEFT-SALNLPALAKVLSEGL 67
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
VG + + + H++ KA I+ +T L + A +R L G Y
Sbjct: 68 SVGAVEDVTYE---NGHAVVKARIKNNTQLPGESRAELRQDTLLGEIY 112
>gi|296165206|ref|ZP_06847753.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295899395|gb|EFG78854.1| conserved hypothetical protein [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 239
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 29/79 (36%), Gaps = 4/79 (5%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +++ L ++ V+ G VG++ + ++ + IR
Sbjct: 51 GLGSGGYSLTAVFSNALN-LPMNAKVKLAGADVGQLESM---VARNYTAVTRLRIRDGVQ 106
Query: 93 LYPSTTATIRTQGLAGITY 111
L +TA +RT G +
Sbjct: 107 LPRGSTAELRTATPLGDVF 125
>gi|323529458|ref|YP_004231610.1| Tannase and feruloyl esterase [Burkholderia sp. CCGE1001]
gi|323386460|gb|ADX58550.1| Tannase and feruloyl esterase [Burkholderia sp. CCGE1001]
Length = 543
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS------VRFNGIPVGR 67
+ + + V+ R P DG+ +S VR G+ VG+
Sbjct: 191 MYFAGGSTGGREGYTVMQRFPDDYDGVIANSPALNFSGVRLIGVKVGQ 238
>gi|308094385|ref|ZP_05888972.2| mce family protein [Vibrio parahaemolyticus AN-5034]
gi|308094318|gb|EFO44013.1| mce family protein [Vibrio parahaemolyticus AN-5034]
Length = 894
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
++ +G M + GSV + V + + VG++ + L E+ + ++ I+
Sbjct: 756 KGFDRVEGVMFTLQSEQRGSV---QVGTPVLYRQMEVGQVTDVRL-GEFADRVVSTIKIK 811
Query: 89 PDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
P+ + ++ + I + ++ + + P+
Sbjct: 812 PEYAYLVRQNSVFWNVSGVDVSIGITGANIKAGTIDSLVRGGIAFSTPEQSQIPPAAKRG 871
Query: 147 FISNAENTSKKISDS 161
+ +
Sbjct: 872 HSFYLYPRADESWVQ 886
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIR 102
S + + + GI +G++ L L E LA A I+P L T +
Sbjct: 309 SEGAPIMYRGIEIGQVTDLSLS-EGREVILASAAIQPAFSDMLTTGTRFVLE 359
Score = 38.0 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 41 ILTMVLAGWLVVK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDINL 94
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 95 SEDLGSIYVDADIYPEATKLLNDKTRFWL 123
>gi|307726323|ref|YP_003909536.1| Tannase and feruloyl esterase [Burkholderia sp. CCGE1003]
gi|307586848|gb|ADN60245.1| Tannase and feruloyl esterase [Burkholderia sp. CCGE1003]
Length = 577
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS------VRFNGIPVGR 67
+ + + V+ R P DG+ +S VR G+ VG+
Sbjct: 221 MYFAGGSTGGREGYTVMQRFPDDYDGVIANSPALNFSGVRLIGVKVGQ 268
>gi|261405887|ref|YP_003242128.1| YhgE/Pip C-terminal domain-containing protein [Paenibacillus sp.
Y412MC10]
gi|261282350|gb|ACX64321.1| YhgE/Pip C-terminal domain protein [Paenibacillus sp. Y412MC10]
Length = 715
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 41/450 (9%), Positives = 118/450 (26%), Gaps = 27/450 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR- 67
++ L W + +D + I V L +++R I +G+
Sbjct: 19 WAAAVIIGGLALLPSLYAWFNIEASWDPYGQTSGVSIA--VANLDKGTTLRDQPINLGKE 76
Query: 68 -IVGL--------FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ L ++ N A + + + L+
Sbjct: 77 IVESLHHNEKLGWRFTEDSENAI-------QGVRRGTDYAAIVIPENFSARIGTVLTNEP 129
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + ++ + N + ++N I ++ I +I + +
Sbjct: 130 VKAQILYYTNEKINAISPKVTAQGASAVVEEVSKNF---IKTANGTIFEIFNTLGIEIEN 186
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ I + ++L ++ N D + I +
Sbjct: 187 QLPAINKVRSLLFRLEKSFPELNEAVSTAQQDIKLANRLVEQADAALPRLEGIATDGKEM 246
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ E ++ + + + T +V + D K + +
Sbjct: 247 AGALAEFANQAAGASKSLEPALRQDLEVLGAATGALSQVLDALGQ--KDIDPKELASRLN 304
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
A E + + + S +E+I + + + +
Sbjct: 305 AAKERAETAAQAAARLGQLFKRLGSISPAAASAAAKLEDIAARWTSAQAALQSIAQAVER 364
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEK-INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
+ ++ ++ ++RY IG + G + + ++L +
Sbjct: 365 --GEEAPADSIDKLKKLTDDINGLTDALLSRYDSEIGPAISKAFTKGAGTAKRVQQELTQ 422
Query: 418 TVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ D + + + G ++ +
Sbjct: 423 ALGSVPDIQRLLQDARKGLKVGGQEVQLAQ 452
>gi|170692619|ref|ZP_02883781.1| Feruloyl esterase [Burkholderia graminis C4D1M]
gi|170142275|gb|EDT10441.1| Feruloyl esterase [Burkholderia graminis C4D1M]
Length = 565
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS------VRFNGIPVGR 67
+ + + V+ R P DG+ +S VR G+ VG+
Sbjct: 213 MYFAGGSTGGREGYTVMQRFPDDYDGVIANSPALNFSGVRLIGVKVGQ 260
>gi|118472982|ref|YP_885541.1| mce related protein [Mycobacterium smegmatis str. MC2 155]
gi|118174269|gb|ABK75165.1| mce related protein [Mycobacterium smegmatis str. MC2 155]
Length = 426
Score = 39.9 bits (90), Expect = 0.80, Method: Composition-based stats.
Identities = 13/114 (11%), Positives = 36/114 (31%), Gaps = 7/114 (6%)
Query: 9 SVGLFVVSILF---FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPV 65
V F ++++ + + + +++ L ++ V+ G +
Sbjct: 14 LVAAFAMTVIVSGCATNGLADLPLPAPGVGSGGYRITAIFSNALN-LPANAKVKLAGADI 72
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
G + + ++ I L +TA +R+ G +I +
Sbjct: 73 GEMDSM---VARNYTAVTTLRIMEGVRLPEGSTAELRSATPLGDVFIAIKPPAP 123
>gi|28898385|ref|NP_797990.1| hypothetical protein VP1611 [Vibrio parahaemolyticus RIMD 2210633]
gi|153839319|ref|ZP_01991986.1| mce related protein [Vibrio parahaemolyticus AQ3810]
gi|260366027|ref|ZP_05778505.1| mce family protein [Vibrio parahaemolyticus K5030]
gi|260897141|ref|ZP_05905637.1| Mce-like protein [Vibrio parahaemolyticus Peru-466]
gi|28806602|dbj|BAC59874.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149747151|gb|EDM58139.1| mce related protein [Vibrio parahaemolyticus AQ3810]
gi|308086706|gb|EFO36401.1| Mce-like protein [Vibrio parahaemolyticus Peru-466]
gi|308114199|gb|EFO51739.1| mce family protein [Vibrio parahaemolyticus K5030]
Length = 882
Score = 39.9 bits (90), Expect = 0.81, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 42/135 (31%), Gaps = 6/135 (4%)
Query: 29 SRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
++ +G M + GSV + V + + VG++ + L E+ + ++ I+
Sbjct: 744 KGFDRVEGVMFTLQSEQRGSV---QVGTPVLYRQMEVGQVTDVRL-GEFADRVVSTIKIK 799
Query: 89 PDTP--LYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
P+ + ++ + I + ++ + + P+
Sbjct: 800 PEYAYLVRQNSVFWNVSGVDVSIGITGANIKAGTIDSLVRGGIAFSTPEQSQIPPAAKRG 859
Query: 147 FISNAENTSKKISDS 161
+ +
Sbjct: 860 HSFYLYPRADESWVQ 874
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIR 102
S + + + GI +G++ L L E LA A I+P L T +
Sbjct: 297 SEGAPIMYRGIEIGQVTDLSLS-EGREVILASAAIQPAFSDMLTTGTRFVLE 347
Score = 38.0 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVVK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLGSIYVDADIYPEATKLLNDKTRFWL 111
>gi|41407953|ref|NP_960789.1| hypothetical protein MAP1855 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41396307|gb|AAS04172.1| hypothetical protein MAP_1855 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 409
Score = 39.9 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +++ L ++ V+ G VG++ + +L + IR
Sbjct: 44 GLGSGGYSLNAVFSNALN-LPMNAKVKLAGADVGQLESM---VARNYTALTRLRIRDGVQ 99
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEK 121
L +TA +RT G ++ L +
Sbjct: 100 LPRGSTAELRTATPLGDVFVALKPPPGDH 128
>gi|37679826|ref|NP_934435.1| paraquat-inducible protein B [Vibrio vulnificus YJ016]
gi|37198571|dbj|BAC94406.1| Paraquat-inducible protein B [Vibrio vulnificus YJ016]
Length = 893
Score = 39.9 bits (90), Expect = 0.82, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++++ G ++ GL +++R+ G+ VG + + L
Sbjct: 34 ILPILTMLLAGWLVAKAIHDAGQRVQI---YFSDAQGLVAGRTTIRYQGLEVGMVRDINL 90
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L +T +
Sbjct: 91 SKDLSNIYVDADIYPEATQLLNKNTRFWL 119
>gi|320170163|gb|EFW47062.1| hypothetical protein CAOG_05006 [Capsaspora owczarzaki ATCC 30864]
Length = 1323
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 26/346 (7%), Positives = 92/346 (26%), Gaps = 5/346 (1%)
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
+ + + + + K+ A T + +
Sbjct: 163 GTDREVFLLREKVTSLEAKRAEDRERMKELEKYRALHDQMTEYKTKWAHAQHELQQQLKE 222
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
++ +++ K+ + + T S ++ + +
Sbjct: 223 ARREAKEATEARDKLTSEVAELSDATELATLDKEMAEEKCDSMQAEVEGLKERIEELNLD 282
Query: 214 KNTFNTITDLITSLDKMIKAIDLQ-KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + + Q+ + + VK D H++
Sbjct: 283 LAILRGEQEEQAAAGDGAARRPTSAETKQLEAHNERLKEALVKLRDMAAAEKHELTAKVT 342
Query: 273 TFQEVGQKIDHLLS-DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
++ + L + + + + + + + + + ++T+ +
Sbjct: 343 VLEKEAASVPDLRERNTKLSAEVADLESQVVELKQAVDDAMGVSDMVEKLTNANLDLEER 402
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
++ + +L EL N++++ ++ +H E N I
Sbjct: 403 VHILNEQLYDLEALRDLADELEE--NHVASERQLQGEIDSLSVRVHELSRALESANETIA 460
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
++ + + L D+Q + +L+ + Q ++
Sbjct: 461 DQEASIGKY-RDLLRDLQADMSELRRREVSQQEESRELATQSQSLL 505
>gi|215446169|ref|ZP_03432921.1| MCE-family protein mce3A [Mycobacterium tuberculosis T85]
gi|289758076|ref|ZP_06517454.1| virulence factor [Mycobacterium tuberculosis T85]
gi|289713640|gb|EFD77652.1| virulence factor [Mycobacterium tuberculosis T85]
Length = 364
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGITY 111
G+ VGR+ + + N + I PD + + A I G +
Sbjct: 1 MMRGVQVGRVAQIDRIEWAQNGVSLRLEIDPDQIRYIPANVEAQISATTAFGAKF 55
>gi|169631231|ref|YP_001704880.1| MCE-family protein [Mycobacterium abscessus ATCC 19977]
gi|169243198|emb|CAM64226.1| Hypothetical MCE-family protein [Mycobacterium abscessus]
Length = 399
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 24/82 (29%), Gaps = 5/82 (6%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGL--STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR 88
N + + P GL V+F+G+ +G++ + +
Sbjct: 32 YNDAFADTKPITVVSPR--AGLVMEEGGKVKFHGLQIGKVTSISYA-NDQAKLELAVNAK 88
Query: 89 PDTPLYPSTTATIRTQGLAGIT 110
+ + T I + G
Sbjct: 89 DLRLIPSNATVRIAGTTVFGAK 110
>gi|118464806|ref|YP_881584.1| mce related protein [Mycobacterium avium 104]
gi|118166093|gb|ABK66990.1| mce related protein [Mycobacterium avium 104]
Length = 405
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 32/89 (35%), Gaps = 4/89 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +++ L ++ V+ G VG++ + +L + IR
Sbjct: 40 GLGSGGYSLNAVFSNALN-LPMNAKVKLAGADVGQLESM---VARNYTALTRLRIRDGVQ 95
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEK 121
L +TA +RT G ++ L +
Sbjct: 96 LPRGSTAELRTATPLGDVFVALKPPPGDH 124
>gi|74202555|dbj|BAE24850.1| unnamed protein product [Mus musculus]
Length = 342
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 27/215 (12%), Positives = 74/215 (34%), Gaps = 12/215 (5%)
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS--- 289
+ V L ++ S ++ + + ++ +K+D D
Sbjct: 1 MDFDRDVLSALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATKEKVDKSNEDLRNLI 60
Query: 290 -------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
++ + S M S+ ++ +T+ ++ + T++ +E I
Sbjct: 61 KQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVILQQS 120
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ L+ + S + + D + A+ + I ++Q +
Sbjct: 121 AADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQG-T 179
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 180 QNLLTSIESETAASEETLTNASQRISKLERNVEEL 214
>gi|91974635|ref|YP_567294.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
gi|91681091|gb|ABE37393.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
Length = 602
Score = 39.9 bits (90), Expect = 0.83, Method: Composition-based stats.
Identities = 22/204 (10%), Positives = 57/204 (27%), Gaps = 8/204 (3%)
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
N + + + + + ++ + ++ T A N+ +
Sbjct: 397 NEISRQVQDSARMASEAVDQARRTNDRVGELSKAAARIGDVVELINTIAGQTNLLALNAT 456
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ ++ + + + + Q + ++ A+KE + +
Sbjct: 457 IEAARAGEAGRGFAVVASEVKALAEQTAKATGDIGQQISGIQAATQESVGAIKEISGTIE 516
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDD 424
T E+ I N+Q +Q D+QN + +H
Sbjct: 517 RLSEISATIASAVEEQGAATLEISRNVQQAAQGTQRVSSNIADVQNGASETGSASSHVLS 576
Query: 425 CLNNFERNPQDIVW--GREKGSVK 446
+ + + GR SV+
Sbjct: 577 AAQSLSNDSNRLKQEVGRFLDSVR 600
>gi|316935019|ref|YP_004110001.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris DX-1]
gi|315602733|gb|ADU45268.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris DX-1]
Length = 688
Score = 39.9 bits (90), Expect = 0.84, Method: Composition-based stats.
Identities = 23/291 (7%), Positives = 76/291 (26%), Gaps = 6/291 (2%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+N+ + + + + + + I + + + +
Sbjct: 384 KNSLECDRLKAEQEEAERRVAAEHKAEMQRLADHFEGAVGEIIETVTSAATELEASAGTL 443
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
S + + + ++Q V E + S + + D +
Sbjct: 444 TSTAEHSQELATSVAAASEQASSNVQSVASATEQMTSSITEISRQVQESARIAGDAVDQA 503
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ + ++ + + ++ T A N+ + + ++ +
Sbjct: 504 RKTNDRIGQLADAANRIGAVVELINTIAGQTNLLALNATIEAARAGDAGRGFAVVAQEVK 563
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ + S Q + + ++ A++E + T E+
Sbjct: 564 ALAEQTGKATGEISQQIGSMQSATQESVGAIREIGGTIERMSEIASTIASAVEEQGAATQ 623
Query: 392 SIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
I N+Q ++ + D+Q + R+ +
Sbjct: 624 EISRNVQQAARGTQDVSAHVVDVQRGATETGTASAQVHSAAQLLSRDSNRL 674
>gi|320156454|ref|YP_004188833.1| paraquat-inducible protein B [Vibrio vulnificus MO6-24/O]
gi|319931766|gb|ADV86630.1| paraquat-inducible protein B [Vibrio vulnificus MO6-24/O]
Length = 885
Score = 39.9 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++++ G ++ GL +++R+ G+ VG + + L
Sbjct: 26 ILPILTMLLAGWLVAKAIHDAGQRVQI---YFSDAQGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L +T +
Sbjct: 83 SKDLSNIYVDADIYPEATQLLNKNTRFWL 111
>gi|167763326|ref|ZP_02435453.1| hypothetical protein BACSTE_01700 [Bacteroides stercoris ATCC
43183]
gi|167698620|gb|EDS15199.1| hypothetical protein BACSTE_01700 [Bacteroides stercoris ATCC
43183]
Length = 391
Score = 39.9 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 23/240 (9%), Positives = 61/240 (25%), Gaps = 15/240 (6%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYW--LSRSNQYDGPMAEVIIRIPGSVDG------- 51
M+ V LF + + + ++ A +++ S+ G
Sbjct: 144 MKGFVQVLQVLLFFIGGIVIIAVLVNKSPMTLFAGLGASAAVLMLVFKDSILGFVAGVQL 203
Query: 52 -----LSTDSSVRF-NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L ++ NG+ G + + L+ + P L ++ R
Sbjct: 204 SANDMLRIGDWIQLPNGVANGTVEEITLNTVKIRNWDETISTVPPYTLVNNSFQNWRGMQ 263
Query: 106 LAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHI 165
+G + + F + + + S+
Sbjct: 264 ESGGRRVNKNIYLDMTTLKFCTPEDLDAIRKNVPLMADYQPAEGEVPTNSQLYRIYIERY 323
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+ + + + + I+ E + + + + + SD + I
Sbjct: 324 LRNLPVVNQDMDLIISQKEPTTYGVPIQVYFFSRNKVWREYERIQSDIFDHLLAIVGKFD 383
>gi|41350446|gb|AAS00505.1| fast skeletal muscle myosin heavy chain [Siniperca chuatsi]
Length = 1937
Score = 39.9 bits (90), Expect = 0.85, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 87/295 (29%), Gaps = 10/295 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1309 QAFTQQIEEFKRHVEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1368
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ V
Sbjct: 1369 SEVAQWRSKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEV 1428
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1429 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1487
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ +++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1488 KNSYEESLDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKT 1541
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+I + L++ L ++ + ++ + D+ + +RN Q +
Sbjct: 1542 EIQSALEEAEGTLEHEEAKILRVQLELNQIKGEVDRKLAEKDEEMEQIKRNSQRV 1596
>gi|238776848|ref|NP_001154918.1| myosin, heavy polypeptide 1.2, skeletal muscle [Danio rerio]
Length = 1935
Score = 39.9 bits (90), Expect = 0.86, Method: Composition-based stats.
Identities = 22/186 (11%), Positives = 62/186 (33%), Gaps = 6/186 (3%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + + +D +F ++ + E A+
Sbjct: 1413 SLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQ 1471
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S E+ + T++ +E + + Q+ ++L +I K
Sbjct: 1472 KEARSLSTELFKMKNSYEETLDQLETLKRENKNLQQEISDLTEQIGETGKSIHELEKSKK 1531
Query: 372 AQRAMH-TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
A + E+ + + + ++ + ++ + D+ + +
Sbjct: 1532 AVETEKAEIQTALEEAEGTLEHEESKILRVQL----ELNQVKSEIDRKLAEKDEEIEQIK 1587
Query: 431 RNPQDI 436
RN Q I
Sbjct: 1588 RNSQRI 1593
>gi|326424053|ref|NP_761469.2| Paraquat-inducible protein B [Vibrio vulnificus CMCP6]
gi|319999431|gb|AAO10996.2| Paraquat-inducible protein B [Vibrio vulnificus CMCP6]
Length = 885
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 11/89 (12%), Positives = 33/89 (37%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + ++++ G ++ GL +++R+ G+ VG + + L
Sbjct: 26 ILPILTMLLAGWLVAKAIHDAGQRVQI---YFSDAQGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L +T +
Sbjct: 83 SKDLSNIYVDADIYPEATQLLNKNTRFWL 111
>gi|301610455|ref|XP_002934764.1| PREDICTED: LOW QUALITY PROTEIN: myosin-9-like [Xenopus (Silurana)
tropicalis]
Length = 1947
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 23/201 (11%), Positives = 67/201 (33%), Gaps = 2/201 (0%)
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
K ++ +++ K ++ T + + + ++ +++ +K+
Sbjct: 1010 NKHETMISDLEERLRREEKQRQELEKTRRKLEGDSTDLHDQIAELQAQIAELK-MQLAKK 1068
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+A A+++I + +I +E + N + ++ +L ++
Sbjct: 1069 EEELQAALARVEEESAQKNIALKKIRELESQISELQEDLETERAARNKAEKQKRDLGEEL 1128
Query: 357 NNISALKENNSLFKDAQRAMHTFR-DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
+ E+ AQ+ + T R ++ + + + Q V +L
Sbjct: 1129 EALKTELEDTLDSTAAQQELRTKREQEVTQLKKTLEDEARTHEVQIQEIRQKHSQAVEEL 1188
Query: 416 QETVNHFDDCLNNFERNPQDI 436
E + N E+ Q +
Sbjct: 1189 SEQLEQTKRLKGNLEKAKQSL 1209
>gi|171702772|dbj|BAG16354.1| myosin heavy chain [Coryphaenoides cinereus]
Length = 1934
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 66/189 (34%), Gaps = 10/189 (5%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + + +D +F + + E A+
Sbjct: 1412 SLEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKV-LADWKQKYEEGQAELEGAQ 1470
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S E+ + T++ +E + + Q+ ++L +I E +
Sbjct: 1471 KEARSLSTELFKMKNSYEETLDNLETMKRENKNLQQEISDLTEQI------GETGKSIHE 1524
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNN 428
+++ +I + L++ L ++ + ++ + D+ +
Sbjct: 1525 LEKSKKQVETEKSEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQ 1584
Query: 429 FERNPQDIV 437
+RN Q I+
Sbjct: 1585 IKRNSQRII 1593
>gi|167590337|ref|ZP_02382725.1| PAS [Burkholderia ubonensis Bu]
Length = 1361
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 32/413 (7%), Positives = 112/413 (27%), Gaps = 31/413 (7%)
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
++ +D+ + + A + TA Q + + +F
Sbjct: 356 QVFATDIDERAISFARAGLYPDS---ILADVTAGRVRQFFSKDAAHYRIKKELREHMLFA 412
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ + + ++ H + ++ A+ +
Sbjct: 413 HHNVLSDPPFSRLDLICCRNLLIYLDREAQIEILKMFHFALRPGGVLFLGSSESADSVSS 472
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
+ + + I + + + + ++ ++ +
Sbjct: 473 MFSVIDKRNRIYRANVAVRGDTPMPVAITGTTSARPVVATVQLPGRRRFSFGDLHQRLVE 532
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
Q + + + + D I + D + + + + T+ + +
Sbjct: 533 QYAPPSVLVNRDSEIVHLSDRAGRFLQYSGGEPSHNIIAAVRPELRLELRTAIYQALHTN 592
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK--- 363
+ R + ++ E + + + MS + +A
Sbjct: 593 RSVEARRVRIERDARSYFVNMTARPVHDPEANADFVLVLFDEVEDSMSSADTATADTQKD 652
Query: 364 --------ENNSLFKDAQRAMHTFRDTSEKI---NRYIPSIGNNLQNFSQ---SGLNDIQ 409
E + Q + ++E++ N + +I L++ ++ + ++Q
Sbjct: 653 PIITQLERELQRTKEQLQSTIEQSETSTEELKASNEELQAINEELRSATEELETSKEELQ 712
Query: 410 NLVRKLQETVNHFDDCLNN---FERNPQDIVWGREKGSV--------KIYKPK 451
++ +L + + Q+++ + G++ K Y P+
Sbjct: 713 SINEELTTVNAELKSKVEETGKINDDLQNLIAANDIGTIFVDRNICIKRYTPR 765
>gi|129563832|gb|ABO31103.1| skeletal muscle myosin heavy chain [Siniperca knerii]
Length = 1937
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 87/295 (29%), Gaps = 10/295 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1309 QAFTQQIEEFKRHVEEEVKAKNALAHAVQSARHDCDLLTENFEEEQEAKAELQRGMSKAN 1368
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ V
Sbjct: 1369 SEVAQWRSKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEV 1428
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1429 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1487
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ +++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1488 KNSYEESLDQLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKT 1541
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+I + L++ L ++ + ++ + D+ + +RN Q +
Sbjct: 1542 EIQSALEEAEGTLEHEEAKILRVQLELNQIKGEVDRKLAEKDEEMEQIKRNSQRV 1596
>gi|171702770|dbj|BAG16353.1| myosin heavy chain [Coryphaenoides acrolepis]
Length = 1934
Score = 39.9 bits (90), Expect = 0.87, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 66/189 (34%), Gaps = 10/189 (5%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + + +D +F + + E A+
Sbjct: 1412 SLEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKV-LADWKQKYEEGQAELEGAQ 1470
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S E+ + T++ +E + + Q+ ++L +I E +
Sbjct: 1471 KEARSLSTELFKMKNSYEETLDNLETMKRENKNLQQEISDLTEQI------GETGKSIHE 1524
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNN 428
+++ +I + L++ L ++ + ++ + D+ +
Sbjct: 1525 LEKSKKQVETEKSEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQ 1584
Query: 429 FERNPQDIV 437
+RN Q I+
Sbjct: 1585 IKRNSQRII 1593
>gi|260426167|ref|ZP_05780146.1| inner-membrane translocator [Citreicella sp. SE45]
gi|260420659|gb|EEX13910.1| inner-membrane translocator [Citreicella sp. SE45]
Length = 297
Score = 39.9 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 3/55 (5%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD---GPMAEVIIRIPGSVDGL 52
M + G F +S L ++ W+S+ D G + I + GL
Sbjct: 181 MGIRANSVIAGAFALSGLLAGVAAVLWVSQRASVDPLMGFTPVLKAFIAAILGGL 235
>gi|312111863|ref|YP_003990179.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Geobacillus sp. Y4.1MC1]
gi|311216964|gb|ADP75568.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Geobacillus sp. Y4.1MC1]
Length = 657
Score = 39.9 bits (90), Expect = 0.88, Method: Composition-based stats.
Identities = 37/397 (9%), Positives = 109/397 (27%), Gaps = 13/397 (3%)
Query: 47 GSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGL 106
+V + S V +NG PV + ++ + + R
Sbjct: 183 DAVTKIVNGSDVGYNGYPV--------LVDQSGIAIVH--PKYKGKDMSDNPSVKRMLAN 232
Query: 107 AGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQ 166
Y S K I + + S A + +
Sbjct: 233 KSGFYTYTSENEKRVMYFDTIPELGWKVGAVYKEKDLFVISNSLAVKMFTIAAIAILIGI 292
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
II + + + + ++ + +A + + + ++ N + I
Sbjct: 293 VIIYFLSRSIVKPLVALQHQTEKVAQGDLTVHVQVKSKDEIGQLANHFNYMTSQVREIIR 352
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
A + + + + + + + + E + ++ L
Sbjct: 353 QINESVAELAASADHLSAVSEETVATSEQVASAINDIAKGATEQAGDLDTINERTAALSQ 412
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ +S L N ++ + + + + + + + +E + ++L +
Sbjct: 413 QIETVTQSAANMQTLSN--ETKEASYNGLENLNVLQLKSDEAKKELFAVEKVMNDLVEKM 470
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRA-MHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+K E++ I IS +L + A + + + +
Sbjct: 471 KKIDEVIQTITAISGQTNLLALNASIEAARAGEHGKGFAVVAEEVRKLAEQSAKATDLIR 530
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREK 442
I + +++ + + +E+ Q + +
Sbjct: 531 QTIAMIQQQVDLAIQALSHSKDMYEQQQQAVHVTGDS 567
>gi|326667811|ref|XP_001924014.2| PREDICTED: myosin heavy chain, fast skeletal muscle [Danio rerio]
gi|220941698|emb|CAX15439.1| novel myosin family protein [Danio rerio]
Length = 1937
Score = 39.9 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 31/293 (10%), Positives = 84/293 (28%), Gaps = 6/293 (2%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E ++I + + + ++ E M
Sbjct: 1308 QAFTQQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEV 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1428 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-TFRDTS 383
+ T++ +E + + Q+ ++L ++ K A +
Sbjct: 1487 KNSYEETLDQLETLKRENKNLQQEISDLTEQLGETGKSIHELEKSKKAVETEKAEIQTAL 1546
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
E+ + + + ++ + ++ + D+ + +RN Q +
Sbjct: 1547 EEAEGTLEHEESKILRVQL----ELNQVKSEIDRKLAEKDEEIEQIKRNSQRV 1595
>gi|218546789|gb|ACK98994.1| white muscle myosin heavy chain [Sander vitreus]
Length = 1929
Score = 39.9 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 34/294 (11%), Positives = 87/294 (29%), Gaps = 6/294 (2%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1301 QAFTQQIEELKRHVEEEVKAKNALAHGLQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1360
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ + V
Sbjct: 1361 SEVAQWRAKYETDAIQRTEELEEAKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQSEV 1420
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1421 EDLMIDVERANGLAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKETRSLSTELFKM 1479
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-TFRDTS 383
+ +++ +E + + Q+ ++L +I K +
Sbjct: 1480 KNSYEESLDQLETMKRENKNLQQEISDLTEQIGETGKSIHELEKSKKQVETEKTEIQTAL 1539
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
E+ + + + Q GLN I+ ++ + D+ + +RN Q ++
Sbjct: 1540 EEAEGTLEHEESKILRV-QLGLNQIKG---EVDRKLAEKDEEMEQIKRNSQRVI 1589
>gi|29829400|ref|NP_824034.1| M protein [Streptomyces avermitilis MA-4680]
gi|29606507|dbj|BAC70569.1| putative M protein [Streptomyces avermitilis MA-4680]
Length = 1258
Score = 39.9 bits (90), Expect = 0.90, Method: Composition-based stats.
Identities = 25/300 (8%), Positives = 90/300 (30%), Gaps = 6/300 (2%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++++ +++ E+ + + + + ++
Sbjct: 118 QTVESHVNENVAWAEQLRARSEQQARRLVEESRAEAEQALAAARAEAERIAAEARQRLNT 177
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
D+++ L+ + + Q E + ++ + E +
Sbjct: 178 DAESARAEAEALLRRARTDAERLLNAASTQAQEATDHAEQLRSSTATESDAARRQASELS 237
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+T ++ + D L + ++ T A S ++ R +Q +++S
Sbjct: 238 RTAEQRMTEADAALREARAEADKVLTEAKEAAAKALASAESANEQRTRTAKEQVARLVSE 297
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
T + + A+ ++ I + + A+ + +
Sbjct: 298 ATKEAETTKASAE--EVVADAKAEAEKILTEAADKARSLTAEETASQLTKAARTAEDVLN 355
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
++ +++ + + + R+ + + ++ + + G K K Y+ K
Sbjct: 356 KASEEAKSTTKAATEEAERIRREAETEADRLRAEAHDI----AEQLKGTAKDDTKEYRAK 411
>gi|66472252|ref|NP_001018343.1| slow myosin heavy chain 1 [Danio rerio]
gi|63021930|gb|AAY26546.1| slow myosin heavy chain 1 [Danio rerio]
Length = 1938
Score = 39.9 bits (90), Expect = 0.92, Method: Composition-based stats.
Identities = 30/296 (10%), Positives = 93/296 (31%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E+ +++ + + + ++ + E + T
Sbjct: 1308 QSYTQQIEDLKRQLEEEVKAKNALAHAVQSARHDSDLLREQFEEEQEAKAELQRSLSKTN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + ++ K+ ++ N +
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEDAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEI 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + +D +F ++ + E+ + S + S S E+
Sbjct: 1428 EDLMVDVERSNAAAAALDKKQRNFDKV-LAEWKQKYEESQTELESAQKESRSLSTELFKL 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + ++ ++L ++ E + ++
Sbjct: 1487 KNSYEEVLDQLETMKRENKNLQEEISDLTEQL------GETGKSIHELEKIRKQLEQEKA 1540
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + +L++ L + + ++ ++ D+ + +RN Q +V
Sbjct: 1541 EIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEEMEQAKRNQQRVV 1596
>gi|14590400|ref|NP_142466.1| chemotaxis protein [Pyrococcus horikoshii OT3]
gi|3256896|dbj|BAA29579.1| 739aa long hypothetical chemotaxis protein [Pyrococcus horikoshii
OT3]
Length = 739
Score = 39.9 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 43/390 (11%), Positives = 119/390 (30%), Gaps = 24/390 (6%)
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELST 116
V NG L++ + T + G+ I
Sbjct: 177 PVYVNG---------EFKGVIGIDVFVSTLVKETQSIKLGKTGYVAVLNPQGLVIIHPKE 227
Query: 117 LRKEKKTIFQIATERN---QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
K IFQ ++ + + F + + + I +E
Sbjct: 228 EYINKLNIFQTPELKDLANELRKGKERGYVVYTFEGIKKVAGYRRMKQTGWIVLATVPLE 287
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ T+ +++ ++ I + V + K + + L
Sbjct: 288 EITEPTLKAADSVVKDVSEMIYKGFGIAIIAIVAMIVAMYKVAGSILAPLEKLKMAAQAL 347
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL-LSDFSSKM 292
+ + ++ + + ++ T + ++++ L D ++ +
Sbjct: 348 ANGKLREVTEYVKEIRYLENDEIGALIQAFEAVSKDLVGTLTAITKRLERLAEGDLTNGL 407
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ + I D S + ++I + D ++ N + I++++ ++ + E
Sbjct: 408 TVEAKGELRDLIEDIKSVTNTLRTSIGSLVDMANELEKRANALAQISNDVTEAINQVNEA 467
Query: 353 MSKIN-----NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG--- 404
+ +++ + E + + E+ + + + SQ G
Sbjct: 468 IQQVSVEAQRQQETINEITEGMRLVAQTSEESVKAMEEFEGAVSEVVSIANEGSQKGDDA 527
Query: 405 ---LNDIQNLVRKLQETVNHFDDCLNNFER 431
+ DIQ+++ +++ETV+ + N E
Sbjct: 528 LKRIEDIQHMMSRIEETVSKVSEMSRNIEE 557
>gi|290957326|ref|YP_003488508.1| large Ala/Glu-rich protein [Streptomyces scabiei 87.22]
gi|260646852|emb|CBG69949.1| putative large Ala/Glu-rich protein [Streptomyces scabiei 87.22]
Length = 1293
Score = 39.9 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 25/300 (8%), Positives = 92/300 (30%), Gaps = 6/300 (2%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++++ +++ E + + + + T S
Sbjct: 153 QTVESHVNENVAWAEQLRARSEAQARRLVDESRAEAEQALAAARAEAERLATEARQRLQS 212
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
DS+ ++ + + Q E + + ++ + + E +
Sbjct: 213 DSEAARGEADQILRRARAEAERLLNAASTQAQEATEHAEQLRTSTATESDSARRQATELS 272
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+T ++ + + L + ++ + T A ++ R +Q +++
Sbjct: 273 RTAEQRMTEAETALREARAEAEKLVTEAKENAAKAVAGAESTNEQRTRTAKEQVARLVEE 332
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
T + S A+ ++ I A + A+ + T++ +
Sbjct: 333 ATKEAEATKAAAEES--VADAKTQAEKIVAEASEKARSITAEESASALAKTAKTAEDVLN 390
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
++ +++ + + + + + + + ++ + + G K + Y+ K
Sbjct: 391 KASEEARSTTKAAIEEAERIRAEAEAEADRLRAEAHDL----AEQLKGTAKDDTEEYRAK 446
>gi|171702766|dbj|BAG16351.1| myosin heavy chain [Coryphaenoides yaquinae]
Length = 1933
Score = 39.9 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 66/189 (34%), Gaps = 10/189 (5%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + + +D +F + + E A+
Sbjct: 1411 SLEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKV-LADWKQKYEEGQAELEGAQ 1469
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S E+ + T++ +E + + Q+ ++L +I E +
Sbjct: 1470 KEARSLSTELFKMKNSYEETLDNLETMKRENKNLQQEISDLTEQI------GETGKSIHE 1523
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNN 428
+++ +I + L++ L ++ + ++ + D+ +
Sbjct: 1524 LEKSKKQVETEKSEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQ 1583
Query: 429 FERNPQDIV 437
+RN Q I+
Sbjct: 1584 IKRNSQRII 1592
>gi|170736166|ref|YP_001777426.1| methyl-accepting chemotaxis sensory transducer [Burkholderia
cenocepacia MC0-3]
gi|169818354|gb|ACA92936.1| methyl-accepting chemotaxis sensory transducer [Burkholderia
cenocepacia MC0-3]
Length = 620
Score = 39.9 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 46/416 (11%), Positives = 123/416 (29%), Gaps = 29/416 (6%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
WL+ G +V + +V G + +S V +G+P+G +
Sbjct: 138 WLTSF-LSSGKAYDVNMDREVTVGGYMMFINSRVELDGVPIG-------------AACMS 183
Query: 85 ALIR------PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ + + A + + I +L K + +
Sbjct: 184 LSVDALAKGISAYRIGETGFAYLV-RPDGAIMMHRDMSLIDGKHFLKDERGLPGDASATL 242
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
Y + ++ I+ S ++ P + + A + +
Sbjct: 243 LAGKSYAYLSYEGDGGARFIATSFIPELNAYVVVQVPQAELLGPVTRAIRSAALVAAVVG 302
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ + L++ + + + + + I S+ F +
Sbjct: 303 FGVALLVIWLVGRAIAAPIRRAATLLSEIASGQGDLTRRMTVESEDEIGQLSDAFNRFVS 362
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLENIADSTSNMRSSIS 316
+ VH +R + + +I +D ++ +S ++ + T+ +R++
Sbjct: 363 SLSTLVHRIRAASASIATGSAQIASGNADLSERTEGQSSNLERTASSMEEITAVVRNNTE 422
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA---Q 373
T + + + ++ ++ +I+ I + ++ S +
Sbjct: 423 TATTAAKMINGAADTAARGGQVVGEVVTTMEQISDASQRISEIIVMIDSISFQTNILALN 482
Query: 374 RAMHTFRD-TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
A+ R + + S NL S +I++L+ TV ++
Sbjct: 483 AAVEAARAGEQGRGFAVVASEVRNLAQRSAQAAKEIKSLIEHSAGTVGAGSRLVSE 538
>gi|91227973|ref|ZP_01262083.1| hypothetical protein V12G01_18032 [Vibrio alginolyticus 12G01]
gi|91188294|gb|EAS74592.1| hypothetical protein V12G01_18032 [Vibrio alginolyticus 12G01]
Length = 882
Score = 39.9 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 29/265 (10%), Positives = 73/265 (27%), Gaps = 7/265 (2%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ L + + G V I +P + G + + + GI +G++ L L E LA
Sbjct: 270 FRLYKDLKTAGRGIAVKIVLPDDSKISG--EGAPIMYRGIEIGQVTDLSLS-EGREVILA 326
Query: 84 KALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
A I+P L T + ++ ++ L + R
Sbjct: 327 SAAIQPAFSDMLTTGTRFVLEEAKVSLSGVENIANLVRGNFLTIVPGAGERSRRFTAIRK 386
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ N + +S + + +I + + + ++
Sbjct: 387 NVFNQQQEKSIAIRLVSDNSFGLDSGANVLYKGIVVGSIIKVGLVKEDKKSQHEVFMDVL 446
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ + + T + + + + +I S +
Sbjct: 447 IDHEYKHLIKSNNRFYVTGSASAELTESGLSVTVPPAKQLLTGSISFVSEGKQDIQKEYQ 506
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLS 286
++ + + G + L +
Sbjct: 507 LFQNESLAELAQYNQSGSRALTLFA 531
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVVK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 TEDLGSIYVDADIYPEAAKLLNDKTRFWL 111
>gi|47188062|emb|CAG13748.1| unnamed protein product [Tetraodon nigroviridis]
Length = 294
Score = 39.9 bits (90), Expect = 0.93, Method: Composition-based stats.
Identities = 25/278 (8%), Positives = 75/278 (26%), Gaps = 15/278 (5%)
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + L I + + + + +L +
Sbjct: 21 ERTKEEFQVEREELEFKIDELHMARESLSHDKAIATETELQGEVRQHSETLKDQDGNLQN 80
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ L + + Q + Q + + + + ++ K K
Sbjct: 81 KSSESALLYGDRNHLTVEEVEAQCEQLTRERDSALAECQHMREILQGVETELGEKTKDFI 140
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ ++ + +++ ++ + IT N +L K+
Sbjct: 141 QQYNAMK----EQGASTVQGLQDKLKNLKEERDELLDRMGKITEEKNSLITDVQDLKIKL 196
Query: 357 NNISALKE-NNSLFKDAQRAMHTFRDTSEKINRYIPSI----------GNNLQNFSQSGL 405
+ + S ++ + + E++ + I +L++ Q+
Sbjct: 197 EVSAGEDQKLQSSVQEQTTLAGELKQSVEELTKKNQEILSQLQMKENMTQDLKDLVQTVT 256
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKG 443
+ + +LQ T + + Q ++ G+E
Sbjct: 257 GERDQIQSQLQRTEEEIQKLQSEKDEEVQRLLEGKENE 294
>gi|302523960|ref|ZP_07276302.1| conserved hypothetical protein [Streptomyces sp. AA4]
gi|302432855|gb|EFL04671.1| conserved hypothetical protein [Streptomyces sp. AA4]
Length = 443
Score = 39.9 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 27/238 (11%), Positives = 69/238 (28%), Gaps = 12/238 (5%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L S V+ G+ VG + + + + + P++ + + +A + L G
Sbjct: 49 LLKQSDVKVRGLIVGSVQDIKATENG---AELTLAMDPESVKLIPQNVSARFLPKTLFGE 105
Query: 110 TYIE-LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA------ENTSKKISDSS 162
Y+ KT+ Q R + + S ++ S
Sbjct: 106 RYVSLEIPKDPSAKTLSQGDVITQDRTSSAVELEQALEHLMPVLQAVQPQKLSSTLTAIS 165
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITD 222
+Q + + + L+ I ++ ++ + + +++
Sbjct: 166 TALQGRGKPLGETLSQLGQYIGDLNPHEPELQHNLQALAEFSGHLSNATPDLVQSLDNLS 225
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
T +A + Q + +S +I+ R T + + +
Sbjct: 226 TTTRTVVAEQANLSSLYGNLTTASQDLQSFLEANSQNLISLASTARPTAELLAKYSPE 283
>gi|226349631|ref|YP_002776745.1| putative Mce family protein [Rhodococcus opacus B4]
gi|226245546|dbj|BAH55893.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 383
Score = 39.9 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 32/277 (11%), Positives = 77/277 (27%), Gaps = 7/277 (2%)
Query: 32 NQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDT 91
N G EV + + + L +S V+ + + VG I + + +R D
Sbjct: 37 NAISGDTYEVTVEL-ADIQNLVGNSPVKADNVIVGNIASI---GGENWIARLTLELRADA 92
Query: 92 PLYPSTTATIRTQGLAGITYIE--LSTLRKEKKTIFQIATERNQRAMITATPSGINYFIS 149
+ + A + + G Y+E + + + T+ A R A+ +
Sbjct: 93 RIPANVGAKLAQTSVLGSQYLELSVPSGEQPVGTLADGAVIPIARTSQYASTEEV-LSAL 151
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ + +++ ++ + TV+ N ++
Sbjct: 152 SLVLNGSGLQQIRTVTSELVRVLDGREQNLHELFGNLETVVGNLDQQRADIVRAIDGLDR 211
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
N D + + Q+ + ++ + ++ D+
Sbjct: 212 LGAELAAQNATLDRGIETITPAAQVLNDQQKQLTTMLTSVGQFGEVATKVLDSSREDLHA 271
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
Q + + +K T F D
Sbjct: 272 NLTALQPTLSHLASVGDSIPEALKIAATLPFPVETTD 308
>gi|117582129|gb|ABK41484.1| slow myosin heavy chain 1 [Danio rerio]
Length = 1938
Score = 39.9 bits (90), Expect = 0.94, Method: Composition-based stats.
Identities = 30/296 (10%), Positives = 93/296 (31%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E+ +++ + + + ++ + E + T
Sbjct: 1308 QSYTQQIEDLKRQLEEEVKAKNALAHAVQSARHDSDLLREQFEEEQEAKAELQRSLSKTN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + ++ K+ ++ N +
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEDAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEI 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + +D +F ++ + E+ + S + S S E+
Sbjct: 1428 EDLMVDVERSNAAAAALDKKQRNFDKV-LAEWKQKYEESQTELESAQKESRSLSTELFKL 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + ++ ++L ++ E + ++
Sbjct: 1487 KNSYEEVLDQLETMKRENKNLQEEISDLTEQL------GETGKSIHELEKIRKQLEQEKA 1540
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + +L++ L + + ++ ++ D+ + +RN Q +V
Sbjct: 1541 EIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEEMEQAKRNQQRVV 1596
>gi|288800444|ref|ZP_06405902.1| DNA repair protein RecN [Prevotella sp. oral taxon 299 str. F0039]
gi|288332657|gb|EFC71137.1| DNA repair protein RecN [Prevotella sp. oral taxon 299 str. F0039]
Length = 558
Score = 39.9 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 19/169 (11%), Positives = 58/169 (34%), Gaps = 5/169 (2%)
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
Q + + D L+ +S++ A + ++ ++E ++
Sbjct: 130 QHQNLLLNQEDFQLNIIDIIAQSQKQLALYTQAYNHYREANKQLALLKETIEKNNDNKDF 189
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT----FRDTSEKIN 387
+ N N+ + + +++ + +E DA + + +
Sbjct: 190 MRFQLNELENMQIKDGELESIEQEVDLLGHAEEIKGALYDAYSNLSNDDSGVVNNLKTAL 249
Query: 388 RYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ + I N + S + +++ +L++ + +N E +PQ +
Sbjct: 250 KRVEDIVNVYPDLSDTSAR-MESCYIELKDIMQELGRKADNIEHDPQRL 297
>gi|190337436|gb|AAI63721.1| Slow myosin heavy chain 1 [Danio rerio]
Length = 1938
Score = 39.9 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 30/296 (10%), Positives = 93/296 (31%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E+ +++ + + + ++ + E + T
Sbjct: 1308 QSYTQQIEDLKRQLEEEVKAKNALAHAVQSARHDSDLLREQFEEEQEAKAELQRSLSKTN 1367
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + ++ K+ ++ N +
Sbjct: 1368 SEVAQWRTKYETDAIQRTEELEDAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEI 1427
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + +D +F ++ + E+ + S + S S E+
Sbjct: 1428 EDLMVDVERSNAAAAALDKKQRNFDKV-LAEWKQKYEESQTELESAQKESRSLSTELFKL 1486
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + ++ ++L ++ E + ++
Sbjct: 1487 KNSYEEVLDQLETMKRENKNLQEEISDLTEQL------GETGKSIHELEKIRKQLEQEKA 1540
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + +L++ L + + ++ ++ D+ + +RN Q +V
Sbjct: 1541 EIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEEMEQAKRNQQRVV 1596
>gi|94312614|ref|YP_585823.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Cupriavidus metallidurans CH34]
gi|93356466|gb|ABF10554.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Cupriavidus metallidurans CH34]
Length = 552
Score = 39.9 bits (90), Expect = 0.95, Method: Composition-based stats.
Identities = 40/403 (9%), Positives = 124/403 (30%), Gaps = 18/403 (4%)
Query: 44 RIPGS-VDGLST--DSSVR--FNGIPVGRIVGLF-----LDQEYPNHSLAKALIRPDTPL 93
R + GL+ + VR G+ VGR+ + L + A I L
Sbjct: 132 RFRENRAGGLAIRDGAVVRTGLAGL-VGRVTRITLKRRILWAQLAGLVWFLAAIAGVHWL 190
Query: 94 YPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAEN 153
A + + ++ ER R M+ + N
Sbjct: 191 AEEQAAQL--WPWLWGAFGFAVLSSFMAGSMLVSRVERPVREMLDF--ALRMGAGDLTSN 246
Query: 154 TSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDS 213
+ +D + + + +++ L + + +I+ ++ + + +
Sbjct: 247 FEHRSADEVGELSRAMRTMQRSLQSVVNDIQGGMASISAATHQVAAGNNDLSQRTEQQAA 306
Query: 214 KNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT 273
+ + A + + ++ + ++ ++ +V+ T+ ++ E ++
Sbjct: 307 SLEETASSMEQLTSTVRQNADNAHQATRLAADASETAVRGGEAVGRVVQTMDEINEASRK 366
Query: 274 FQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ I+ + + + A + +
Sbjct: 367 IVDIIGVIEGIAFQTNILALNAAVEAARAAEQGRGFAVVAG-EVRSLAQRSANAAKEIKG 425
Query: 334 TIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
I N + + +++ ++ + ++ I A+K + + A E++N +
Sbjct: 426 LIGNTVARVESGAEQVSQAGATMDEIVQAVKRVTDIMGEISSASAEQSAGIEQVNEAVTQ 485
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ +++ + + + L+E + ++ F + Q
Sbjct: 486 M-DDVTQQNAALVEQAAAAAGSLEEQAERLRESISTFRVSMQA 527
>gi|171702768|dbj|BAG16352.1| myosin heavy chain [Coryphaenoides armatus]
Length = 1933
Score = 39.9 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 66/189 (34%), Gaps = 10/189 (5%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + + +D +F + + E A+
Sbjct: 1411 SLEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKV-LADWKQKYEEGQAELEGAQ 1469
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S E+ + T++ +E + + Q+ ++L +I E +
Sbjct: 1470 KEARSLSTELFKMKNSYEETLDNLETMKRENKNLQQEISDLTEQI------GETGKSIHE 1523
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNN 428
+++ +I + L++ L ++ + ++ + D+ +
Sbjct: 1524 LEKSKKQVETEKSEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQ 1583
Query: 429 FERNPQDIV 437
+RN Q I+
Sbjct: 1584 IKRNSQRII 1592
>gi|197120273|ref|YP_002140700.1| hypothetical protein Gbem_3912 [Geobacter bemidjiensis Bem]
gi|197089633|gb|ACH40904.1| conserved hypothetical protein [Geobacter bemidjiensis Bem]
Length = 126
Score = 39.9 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 8/47 (17%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPG 47
M +K VG+F ++++ + +Y N G + +
Sbjct: 6 MGNKAIKVLVGVF-IAVIVLAVAYVYAALHWNFSKGDRVGYVQKFSE 51
>gi|145548287|ref|XP_001459824.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427651|emb|CAK92427.1| unnamed protein product [Paramecium tetraurelia]
Length = 2594
Score = 39.9 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 36/367 (9%), Positives = 88/367 (23%), Gaps = 26/367 (7%)
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG+ + + + ++ + +T YI+ + ++ +K
Sbjct: 471 VGKQEDIVFNPVREQLFRIFESVVTNSVIRITTRHREMLSMPELQQYIQDESNQQSEKVD 530
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ ++ I I+ +
Sbjct: 531 VKAIINGSENFQILCGQMRKELEIAFDYLEQYAEKLKPFMKWYVENTGVNIEKQYADKEV 590
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
N D+ + T + I S + + + +
Sbjct: 591 EEYRNAINQYKDQDQQFQDIEPTQEIGMILFDNQKLKAKIKSSAMNCIQELQKFIPEYIY 650
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
V I E + E I++ D S+ + A L +
Sbjct: 651 KKAVLFTQKTTQLYSTIAISPITVEQFVNYMEAVNVINNQFEDLSNVSQEVTAMALLMD- 709
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
+ + ++ +K + M+ +
Sbjct: 710 -----------------ELRIKIQDKHKQKFAECNQQVSQLRKKVDDAMANYDQ-----N 747
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
N KD +R + T + +N I L + + L+D+ V+ +++ V+
Sbjct: 748 LNKFRKDMERMIPQVDSTVKDLNERISE--QPLSSLAAD-LSDMVTFVQGVRKQVDELKV 804
Query: 425 CLNNFER 431
Sbjct: 805 HAKKLND 811
>gi|50512294|ref|NP_694514.2| myosin, heavy polypeptide 2, fast muscle specific [Danio rerio]
gi|48734671|gb|AAH71279.1| Myosin, heavy polypeptide 2, fast muscle specific [Danio rerio]
gi|122890804|emb|CAM14144.1| myosin, heavy polypeptide 2, fast muscle specific [Danio rerio]
Length = 1935
Score = 39.9 bits (90), Expect = 0.96, Method: Composition-based stats.
Identities = 30/324 (9%), Positives = 93/324 (28%), Gaps = 17/324 (5%)
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
+ A + F E +S +R Q + IE+ ++ + +
Sbjct: 1272 INDLSAQRARLQTENGEFGRQLEEKEALVSQLTRGKQAFTQQIEELKRQIEEEVKAKNAL 1331
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
S + ++K S + Q E ++ S
Sbjct: 1332 AHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEES 1391
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF-----SSKMKSKETSAFLENI 304
+ + + V + ++ Q++ + D + + N
Sbjct: 1392 KKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEVEDLMIDVERANALAANLDKKQRNF 1451
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTI-NTIENITSNLNDSSQKFAELMSKINNISA-L 362
+ + + + QK ++ + + ++ ++ + L + N+ +
Sbjct: 1452 DKVLAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSYEETLDQLETLKRENKNLQQEI 1511
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR--------- 413
+ + +++H + + I L+ + ++ ++R
Sbjct: 1512 SDLTEQLGETGKSIHELEKAKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVK 1571
Query: 414 -KLQETVNHFDDCLNNFERNPQDI 436
++ + D+ + +RN Q +
Sbjct: 1572 GEIDRKLAEKDEEMEQIKRNSQRV 1595
>gi|296167386|ref|ZP_06849788.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
gi|295897330|gb|EFG76934.1| virulence factor mce family protein [Mycobacterium parascrofulaceum
ATCC BAA-614]
Length = 386
Score = 39.5 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 6/87 (6%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V + +++G +S V + VG I + L + + +T L +
Sbjct: 49 TIYVQVPDTLAING---NSKVMVADVFVGSIKSIQL---KNWIATLTLGVDKNTKLPKNA 102
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTI 124
TA I L G ++EL+ + +
Sbjct: 103 TAKIGQTSLLGSQHVELAAPPNPSQEL 129
>gi|297157164|gb|ADI06876.1| M protein [Streptomyces bingchenggensis BCW-1]
Length = 1337
Score = 39.5 bits (89), Expect = 0.97, Method: Composition-based stats.
Identities = 17/210 (8%), Positives = 60/210 (28%), Gaps = 5/210 (2%)
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
+ + + + + + R+ T+ + ++ + E
Sbjct: 225 AQAQEATHHAEQLRTSTASESDQARRQATELTRAAELRVQEAETSLREARFEAEKVLTEA 284
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF-AELMSKINNISA 361
A + + + +I + L +++ + ++ + A
Sbjct: 285 KEAAEKRLSAAETDNEQRTRTAKAEIARLVGEATKEAEALRAEAEQVRDDARAEAERLIA 344
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNH 421
+ + K A+ + + + N Q +++ ++ + + K + +
Sbjct: 345 EADETARAKTAEDSAAQLAKAARSAEEVLTKASENAQATTKAAADEAERIRAKAEAEADR 404
Query: 422 FDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + + G K K Y+ K
Sbjct: 405 LRAEAH----DTAAQLKGAAKDDTKEYRAK 430
>gi|262394197|ref|YP_003286051.1| paraquat-inducible protein B [Vibrio sp. Ex25]
gi|262337791|gb|ACY51586.1| paraquat-inducible protein B [Vibrio sp. Ex25]
Length = 833
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 30/265 (11%), Positives = 74/265 (27%), Gaps = 7/265 (2%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ L + + G V I +P + G + + + GI +G++ L L E LA
Sbjct: 221 FRLYKDLKTAGRGIAVKIVLPDDSKISG--EGAPIMYRGIEIGQVTDLSLS-EGREVILA 277
Query: 84 KALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
A I+P L T + ++ ++ L + R
Sbjct: 278 SAAIQPAFSDMLTTGTRFVLEEAKVSLSGVENIANLVRGNFLTIVPGAGDRSRRFTAIRK 337
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ N + +S + + +I N+ + + ++
Sbjct: 338 NVFNQQQEKSIAIRLVSDNSFGLDSGANVLYKGIVVGSIINVGLVEEGKKSQHEVFMDVL 397
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ + + T + + + + +I S +
Sbjct: 398 IDHEYKHLIKSNNRFYVTGSASAELTESGLSVTVPPAKQLLTGSISFVSEGKQDIQKEYQ 457
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLS 286
++ + + G + L +
Sbjct: 458 LFQNESLAELAQYNQSGSRALTLFA 482
Score = 36.4 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 9/96 (9%), Positives = 33/96 (34%), Gaps = 3/96 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
+ + + + + VG++ + L E+ + + I+P+ + ++ + I
Sbjct: 715 VQVGTPILYREMEVGQVTDVSL-GEFADRVVTTIKIQPEYAYLVRQNSVFWNVSGVDVSI 773
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ ++ + + T P+ +
Sbjct: 774 GITGANIKAGTFDSLVRGGIAFSTPEQSTIPPAAKS 809
>gi|256376293|ref|YP_003099953.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
gi|255920596|gb|ACU36107.1| virulence factor Mce family protein [Actinosynnema mirum DSM 43827]
Length = 348
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 36/135 (26%), Gaps = 20/135 (14%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+ LFVV L + F+ + G V +R+ + GL G
Sbjct: 2 RVRIALFVVIALVGTGFTGARYAGL--VPGDEYPVHVRLART-GGLFAG----------G 48
Query: 67 RIV-------GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ + + A LI + + A + + G Y++
Sbjct: 49 EVTHRGVRVGRVDRVRLVDGVVQADLLIDGGVAIPRAARAVVTNRSAVGEQYLDFKPGDG 108
Query: 120 EKKTIFQIATERNQR 134
E +
Sbjct: 109 EGSGDLAGDLAVGEV 123
>gi|170087104|ref|XP_001874775.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649975|gb|EDR14216.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 489
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 31/237 (13%), Positives = 69/237 (29%), Gaps = 5/237 (2%)
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ-EVGQ 279
KM + + + ++ V V N DV T G
Sbjct: 113 KSTAKGKGKMKDVPPKPAKKNVKPSQVSNIDDLVDDEMDVDNAAEDVARAINTASGHKGH 172
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
L E N ++ T + ++ + + I+ +
Sbjct: 173 NTQGLAEQLRRAEAHIEDLKNQLEELFQVRNTEPEELLKQQQTHHQAQVQALESLIKELN 232
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + + NI +E + + Q+ + +++ E N+ + + +
Sbjct: 233 AQITRKEPLLLTSEGSLFNILTREEADKETHNLQQQVKSWKAEVENTNKLLKERDDEIVR 292
Query: 400 FSQSGLNDIQNLVR----KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
+S ++ + + +L + + N R P GR G + PKH
Sbjct: 293 LRESERVNMVSTEQYLKLELHQEIERGRSIANKVARAPPSASRGRNGGLLGSDDPKH 349
>gi|299117252|emb|CBN75214.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1556
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 15/203 (7%), Positives = 60/203 (29%), Gaps = 4/203 (1%)
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+++ +Q + + + ++ V +R+ + +E + +
Sbjct: 153 MRSRHVQLSKKRSADDMDMGATRRRDDRKLSELVDKLRQRVSSAEEQLKGVKAENQRLRQ 212
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ + + + ++++ + + + +F
Sbjct: 213 DKLDAGCAPEDAHEQAMAAAAAAHREPPGGRGRSQEEVETLHRELREAQAKAQLIQARFD 272
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
L ++ ++ + Q RD ++ + + + ++D++
Sbjct: 273 HLEART--LAQADLHEGSVDKLQETNRQLRDVRRELQDALHERDVAVAKCGR--VDDLEE 328
Query: 411 LVRKLQETVNHFDDCLNNFERNP 433
V +L+ +D + NP
Sbjct: 329 TVSELRRHNKELEDQVTRLCENP 351
>gi|254248920|ref|ZP_04942240.1| Methyl-accepting chemotaxis protein [Burkholderia cenocepacia
PC184]
gi|124875421|gb|EAY65411.1| Methyl-accepting chemotaxis protein [Burkholderia cenocepacia
PC184]
Length = 620
Score = 39.5 bits (89), Expect = 1.0, Method: Composition-based stats.
Identities = 47/410 (11%), Positives = 125/410 (30%), Gaps = 17/410 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
WL+ G +V + +V G + +S V +G+P+G + L + +
Sbjct: 138 WLTSF-LSSGKAYDVNMDREVTVGGYMMFINSRVELDGVPIGA-ACMSLSVDALAKGI-- 193
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + A + + I +L K + +
Sbjct: 194 ----SAYRIGETGFAYLV-RPDGAIMMHRDMSLIDGKHFLKDERGLPGDASATLLAGKSY 248
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
Y + ++ I+ S ++ P + + A + + +
Sbjct: 249 AYLSYEGDGGARFIATSFIPELNAYVVVQVPQAELLGPVTRAIRSAALVAAVVGFGVALL 308
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ L++ + + + + + I S+ F + + V
Sbjct: 309 VIWLVGRAIAAPIRRAATLLSEIASGQGDLTRRMTVESEDEIGQLSDAFNRFVSSLSTLV 368
Query: 265 HDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
H +R + + +I +D ++ +S ++ + T+ +R++
Sbjct: 369 HRIRAASASIATGSAQIASGNADLSERTEGQSSNLERTASSMEEITAVVRNNTETATTAA 428
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA---QRAMHTF 379
T + + + ++ ++ +I+ I + ++ S + A+
Sbjct: 429 KMINGAADTAARGGQVVGEVVTTMEQISDASQRISEIIVMIDSISFQTNILALNAAVEAA 488
Query: 380 RD-TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
R + + S NL S +I++L+ TV ++
Sbjct: 489 RAGEQGRGFAVVASEVRNLAQRSAQAAKEIKSLIEHSAGTVGAGSRLVSE 538
>gi|221069476|ref|ZP_03545581.1| rod shape-determining protein MreC [Comamonas testosteroni KF-1]
gi|220714499|gb|EED69867.1| rod shape-determining protein MreC [Comamonas testosteroni KF-1]
Length = 341
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 15/98 (15%), Positives = 29/98 (29%), Gaps = 7/98 (7%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVR-FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
P ++ G DG+ S V G+ +G++ + YP + LI D +
Sbjct: 139 PYTRRVVIDKGQADGIEPGSPVLDERGV-IGQVTRV-----YPTRAEVTLLIDRDQAIPV 192
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
T G + + + +
Sbjct: 193 FNPRTGARSVAYGDASSTRAGGLELRFMPSNADVQVGD 230
>gi|300789439|ref|YP_003769730.1| ABC transporter substrate-binding protein [Amycolatopsis
mediterranei U32]
gi|299798953|gb|ADJ49328.1| ABC transport system substrate-binding protein [Amycolatopsis
mediterranei U32]
Length = 396
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 12/85 (14%), Positives = 28/85 (32%), Gaps = 5/85 (5%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTATIRTQGLAGI 109
L+ + V+ G+P G + + + + P L + +A + + + G
Sbjct: 49 LAPTAEVKVKGVPFGEVRAVR---STRAGAEIDLALEPAKIGLLPGNVSARLLPKTVFGE 105
Query: 110 TYIELSTLRKEKKTIFQIATERNQR 134
Y+ L + + R
Sbjct: 106 RYVNLVLPDSPQGKLRAGDVIAQDR 130
>gi|114327911|ref|YP_745068.1| protein translocase subunit YajC [Granulibacter bethesdensis
CGDNIH1]
gi|114316085|gb|ABI62145.1| protein translocase subunit YajC [Granulibacter bethesdensis
CGDNIH1]
Length = 119
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 13/99 (13%), Positives = 26/99 (26%), Gaps = 7/99 (7%)
Query: 19 FFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYP 78
F +++ ++ + GL V +G VGR+V +
Sbjct: 28 LLLVFGVFYFLLIRPQQQQAKKLKATL----AGLKRGDQVVTSGGIVGRVVK---ATDGT 80
Query: 79 NHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ + T A++ A T
Sbjct: 81 PEVEVEIAPNVKVIVLRDTIASVVNPQAANDTKPASKAG 119
>gi|326333401|ref|ZP_08199647.1| putative secreted protein [Nocardioidaceae bacterium Broad-1]
gi|325948797|gb|EGD40891.1| putative secreted protein [Nocardioidaceae bacterium Broad-1]
Length = 431
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 20/105 (19%), Positives = 41/105 (39%), Gaps = 7/105 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
+G+ V L + + W ++ G E+ ++ L + V+ G+ VG +
Sbjct: 12 ILGI-VFIALVLTALVLTW-AQFTNKFGDFEEITLKADRIGLQLPDRADVKVRGLIVGEV 69
Query: 69 VGLFLDQEYPNHSLAKALIRPD--TPLYPSTTATIRTQGLAGITY 111
+ + E + + PD + ++P T I + L G Y
Sbjct: 70 LDMKATDEG---AELTLGLFPDEISKVHPDVTGAILPKTLFGQKY 111
>gi|224367628|ref|YP_002601791.1| hypothetical protein HRM2_05130 [Desulfobacterium autotrophicum
HRM2]
gi|223690344|gb|ACN13627.1| hypothetical protein HRM2_05130 [Desulfobacterium autotrophicum
HRM2]
Length = 232
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 16/186 (8%), Positives = 47/186 (25%), Gaps = 7/186 (3%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ + + GL+ + V + +GR+ + + + + L
Sbjct: 21 NTLDLTVNFKD-IQGLTPGAPVILDHTTIGRVKEILPLKNGIYPTAIEIDADFKPLLTEH 79
Query: 97 TTATIRTQGLAGIT------YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
+T T+ + + + ++ + A + S + +
Sbjct: 80 STFTLIPEYPDKNSETAPRTVVMVAKSISGGAPLGNGAVVSGSESPGIPEISNMLKHFAT 139
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ K+ Q+ E + T E+ + I +
Sbjct: 140 GFESLKERIGKIPESQEFKEFEQSIDALTQRMKESGKEAQDRIKNDILPKLEQEFERMKK 199
Query: 211 SDSKNT 216
Sbjct: 200 RFLDQQ 205
>gi|325474431|gb|EGC77618.1| HAMP domain-containing protein [Treponema denticola F0402]
Length = 1533
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 41/394 (10%), Positives = 104/394 (26%), Gaps = 20/394 (5%)
Query: 66 GRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF 125
G + +++D + + + L + I+ L Y
Sbjct: 661 GEVTSIYVDADGLPPYDLTIEKKDFSVLSDKLISNIKINYLDPGKYYVGLMHSGRGVYFA 720
Query: 126 QIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIET 185
Q + I G Y + + I I +T +I +
Sbjct: 721 QKTISFDDIGNIKLGDYGKVYKYNWLLSAMDSDFSDYFLIICFTIFILLIMTLSITGVIY 780
Query: 186 ISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILEN 245
+ ++ ++ + + M + V L
Sbjct: 781 SVKEAIKIKYEVTVLLRGGAMSFGKEKKLSALKVRGGGLRLKFMMFTMTLIISVILTLAL 840
Query: 246 IQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIA 305
+ + + + ++ + + + SA E
Sbjct: 841 PLGFRFSETQERLLAEGLASNTQVLLESLSSGAKAYLPSKNVLELGFLPSQVSALKEASF 900
Query: 306 DSTSNMRSSISAIREIT---DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ + + + + I+S I+T + + + + K++ I
Sbjct: 901 ATITGVHIDNKKVGYNFVWASNDEDILSKIDTPDFVVGKSELLLPQLENVYKKLDEIDK- 959
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN-- 420
+A+ ++ D + + I N S N+IQ+ + +++ ++
Sbjct: 960 --------EARDSVGEIADEIQSLTDMTMLIALNTDLKSVERRNEIQSAINQMETKLSSE 1011
Query: 421 ----HFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ E N + + R+ S YKP
Sbjct: 1012 LNGLSIKGSGSYPEFNSKKL--SRDITSYLFYKP 1043
>gi|86749478|ref|YP_485974.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
gi|86572506|gb|ABD07063.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
Length = 673
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 23/270 (8%), Positives = 76/270 (28%), Gaps = 6/270 (2%)
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
++ I ++ + + + + + + S + + +
Sbjct: 390 QRRKADMIQLADSFEAAVGEIVDTVSSASTELEASASTLTSTAERSQELTTMVAAASEEA 449
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ ++Q V E + S N + + ++ +T + ++ + +
Sbjct: 450 STNVQSVASATEELSSSVNEISRQVQESARMANEAVNQARTTNDRVGELSKAAARIGDVV 509
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ T A N+ + + ++ + + + + S Q +
Sbjct: 510 ELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGDISQQISSIQ 569
Query: 353 MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------ 406
+ +++ A+++ + + T E+ I N+Q SQ
Sbjct: 570 TATQDSVGAIRDISGTIEKLSEIASTIASAVEEQGAATQEISRNVQQASQGTQQVSANIT 629
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
D+Q + + +
Sbjct: 630 DVQRGATETGSASAQVLSAAQTLSSDSNRL 659
>gi|12657350|emb|CAC27776.1| myosin heavy chain [Notothenia coriiceps]
Length = 1929
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 31/292 (10%), Positives = 88/292 (30%), Gaps = 10/292 (3%)
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
E + I + + + ++ E M
Sbjct: 1304 QQIEELKRHIEEEVKAKNALAHGLQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVA 1363
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T K A LQ+ + +E + + K+ ++++ V D+
Sbjct: 1364 QWRSKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLLSEVEDLM 1423
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ + +D +F ++ + E A+ + + S E+ +
Sbjct: 1424 IDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSY 1482
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
++ +E + + Q+ ++L +I E + +++ +I
Sbjct: 1483 EEALDHLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKSKKQLETEKTEIQT 1536
Query: 389 YIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1537 ALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKRNSQRVI 1588
>gi|260778544|ref|ZP_05887436.1| methyl-accepting chemotaxis protein [Vibrio coralliilyticus ATCC
BAA-450]
gi|260604708|gb|EEX31003.1| methyl-accepting chemotaxis protein [Vibrio coralliilyticus ATCC
BAA-450]
Length = 467
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 19/236 (8%), Positives = 74/236 (31%), Gaps = 8/236 (3%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + ++ + + K +++ + V +
Sbjct: 133 YYIMTFIGGAMFTMNKALNTLADGDLTSRMNFFKVRDEFSEIAITIDKVAEREQSLVLSI 192
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+E+ Q++ ++ + S+++ + + + + D +
Sbjct: 193 QESVALMQQISSDLNQS-NQHSAEISGTQQEHLNSLASATEEMASTIREVANLAHDSSTQ 251
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKI 386
+ + + + + ++L +++ + S A+ E ++ + SE+
Sbjct: 252 TENARSVAQQGQQKVGHTLTSISQLSNEVQSASQAVAELDANAAQIDEVVTAINGISEQT 311
Query: 387 NRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
N + + G ++++ L + Q++ + +RN Q +
Sbjct: 312 NLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQQSTVEIQSMIEALQRNSQSL 367
>gi|54024945|ref|YP_119187.1| putative Mce family protein [Nocardia farcinica IFM 10152]
gi|54016453|dbj|BAD57823.1| putative Mce family protein [Nocardia farcinica IFM 10152]
Length = 341
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 28/289 (9%), Positives = 76/289 (26%), Gaps = 6/289 (2%)
Query: 23 FSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSL 82
+++ ++ +++ G G+ D+ VR G VG +V +
Sbjct: 33 GAVWRSVPPDRAGQAGFDLVAATLGD--GVGVDTPVRLRGRTVGAVVAVAPLGVDRRRVS 90
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
L + + L G T +EL + + + + R
Sbjct: 91 IGIEAPRLAELSTAMQTRFVSANLFGSTALELVPMPGGQPLSEGMVLDVGDRVDNFTVTG 150
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
+ ++ + PL + + +
Sbjct: 151 ILRESGRAVTEVLTPRLAAALEDAADLTEAGAPLLGAALLVARTW----QRVERVPLAQA 206
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
V + + + ++T+L + + D + Q + I SN + Q++
Sbjct: 207 LPAVADATEGAAAFTPSALGILTALASVEELDDDVHIGQASDTISEVSNLVFAFAGQLVG 266
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + ++ + + T + +
Sbjct: 267 ALGPTSDAVDMLLDTLIPLNQAMRGVTPAQVGALTDRLDGALRPHGDGV 315
>gi|262281063|ref|ZP_06058845.1| preprotein translocase [Acinetobacter calcoaceticus RUH2202]
gi|299768781|ref|YP_003730807.1| preprotein translocase, YajC subunit [Acinetobacter sp. DR1]
gi|262257294|gb|EEY76030.1| preprotein translocase [Acinetobacter calcoaceticus RUH2202]
gi|298698869|gb|ADI89434.1| preprotein translocase, YajC subunit [Acinetobacter sp. DR1]
Length = 109
Score = 39.5 bits (89), Expect = 1.1, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ ++ + F+ + W ++ + + ++ L S V F G +G++ +
Sbjct: 24 ILMIVVFVAIFYFLIWRPQAKRAKEHRSL--------IESLGVGSEVVFAGGLMGKVTKI 75
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
D +++ + + + ++ ++ +G
Sbjct: 76 EGD-----YAVVELSRGVEVKIQRASVISVLPEG 104
>gi|7209643|dbj|BAA92289.1| myosin heavy chain [Seriola dumerili]
Length = 1938
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 34/295 (11%), Positives = 86/295 (29%), Gaps = 10/295 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + I + + + ++ E M
Sbjct: 1310 QAFTQQIEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1369
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ V
Sbjct: 1370 SEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEV 1429
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1430 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1488
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A T
Sbjct: 1489 KNSYEEALDHLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKT 1542
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+I + L++ L ++ + ++ + D+ + +RN Q +
Sbjct: 1543 EIQSALEEAEGTLEHEEAKILRVQLELNQVKGEVDRKLAEKDEEMEQIKRNSQRV 1597
>gi|315635748|ref|ZP_07891011.1| methyl-accepting chemotaxis protein [Arcobacter butzleri JV22]
gi|315480045|gb|EFU70715.1| methyl-accepting chemotaxis protein [Arcobacter butzleri JV22]
Length = 642
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 20/209 (9%), Positives = 70/209 (33%), Gaps = 4/209 (1%)
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + N +++ + V T +E ++ + S+ S ++ +
Sbjct: 387 KMLVENKTNGTTLASSSNTLLENVDKLNKSSTSTAANLEETAASLEEMTSNLRSSTENVK 446
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ + + + + ++ + Q T + L + +
Sbjct: 447 KMSSIASSVTNRAKSGEELANQTVESMQEINSQITSINEAITVIDQIAFQTNILSLNAAV 506
Query: 357 NNISALKENNS---LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
+A + + + + + + +I + S + + + N++ N
Sbjct: 507 EAATAGEAGKGFAVVAAEVRNLATRSAEAAREIKEIVESATSKAND-GKVIANEMINGYT 565
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREK 442
+L + + + + NFE + ++ + G E+
Sbjct: 566 ELNKDIMETIELIKNFENSSKEQLLGIEQ 594
>gi|293611109|ref|ZP_06693408.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826761|gb|EFF85127.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325123437|gb|ADY82960.1| putative preprotein translocase IISP family, membrane subunit
[Acinetobacter calcoaceticus PHEA-2]
Length = 109
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 10/94 (10%), Positives = 37/94 (39%), Gaps = 13/94 (13%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ ++ + F+ + W ++ + + ++ L S V F G +G++ +
Sbjct: 24 ILMIVVFVAIFYFLIWRPQAKRAKEHRSL--------IESLGVGSEVVFAGGLMGKVTKI 75
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
D +++ + + + ++ ++ +G
Sbjct: 76 EGD-----YAVVELSRGVEVKIQRASVISVLPEG 104
>gi|145641077|ref|ZP_01796658.1| hypothetical protein CGSHiR3021_08406 [Haemophilus influenzae
R3021]
gi|145274238|gb|EDK14103.1| hypothetical protein CGSHiR3021_08406 [Haemophilus influenzae
22.4-21]
Length = 241
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
>gi|21223757|ref|NP_629536.1| large Ala/Glu-rich protein [Streptomyces coelicolor A3(2)]
gi|6808390|emb|CAB70627.1| large Ala/Glu-rich protein [Streptomyces coelicolor A3(2)]
Length = 1326
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/300 (8%), Positives = 94/300 (31%), Gaps = 6/300 (2%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++++ +++ E+ + + + + S
Sbjct: 142 QTVESHVNENVAWAEQLRARTEQQARRLLDESRAEAEQAMAAARAEAERLTAEARQRLRS 201
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
D+++ ++ + + Q E + ++ + +T +V+E +
Sbjct: 202 DAESARAEADQILRRARTDAERLLNAASTQAQEATDHAEQLRSSTASESESTRREVQELS 261
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ ++ + + L ++ + A +S ++ R +Q +++
Sbjct: 262 RAAEQRMSEAEEALRKAQAEAEKVVAQAEEAAAKALSSAEATNEQRTRTAKEQVARLVGE 321
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
T + ++ Q A+ ++ I A + A+ + ++ +
Sbjct: 322 ATKDAESTRS--EAEQVVADARAEAERIVAEAAEKARTITAEESATQLSKAAKTAEDVLN 379
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + +++ + + + + + + ++ + G K K Y+ K
Sbjct: 380 KASEDAKRTTKAATEEAERIRTEAEAEADRLRAEAHDI----AAELKGAAKDDTKEYRAK 435
>gi|256785149|ref|ZP_05523580.1| large Ala/Glu-rich protein [Streptomyces lividans TK24]
gi|289769042|ref|ZP_06528420.1| large Ala/Glu-rich protein [Streptomyces lividans TK24]
gi|289699241|gb|EFD66670.1| large Ala/Glu-rich protein [Streptomyces lividans TK24]
Length = 1326
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 24/300 (8%), Positives = 94/300 (31%), Gaps = 6/300 (2%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
+ ++++ +++ E+ + + + + S
Sbjct: 142 QTVESHVNENVAWAEQLRARTEQQARRLLDESRAEAEQAMAAARAEAERLTAEARQRLRS 201
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
D+++ ++ + + Q E + ++ + +T +V+E +
Sbjct: 202 DAESARAEAEQILRRARTDAERLLNAASTQAQEATDHAEQLRSSTASESESTRREVQELS 261
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ ++ + + L ++ + A +S ++ R +Q +++
Sbjct: 262 RAAEQRMSEAEEALRKAQAEAEKVVAQAEEAAAKALSSAEATNEQRTRTAKEQVARLVGE 321
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
T + ++ Q A+ ++ I A + A+ + ++ +
Sbjct: 322 ATKDAESTRS--EAEQVVADARAEAERIVAEAAEKARTITAEESATQLSKAAKTAEDVLN 379
Query: 392 SIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPK 451
+ + +++ + + + + + + ++ + G K K Y+ K
Sbjct: 380 KASEDAKRTTKAATEEAERIRTEAEAEADRLRAEAHDI----AAELKGAAKDDTKEYRAK 435
>gi|27377618|ref|NP_769147.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
gi|27350763|dbj|BAC47772.1| blr2507 [Bradyrhizobium japonicum USDA 110]
Length = 671
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 29/350 (8%), Positives = 90/350 (25%), Gaps = 13/350 (3%)
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
I L T A + + A+
Sbjct: 308 AILFGSLVAFLIARSIVGPLTTMTRAMGALAGGDLKVEIPGRGNRDEIGDMAKAIQVFKE 367
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ E +E + + + + +++ T + ++ T
Sbjct: 368 SMVETERLRHEQVEVEARQAEGRKKDMVRLADQFEQAVGEIVDTVSSASNELEASAGTLT 427
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
T A Q+ + ++ + ++ S ++ V +
Sbjct: 428 TTASRAQDLSTEVASASQEASANVQAVASATEELSSSVSEIARQVQESARIASEAVGQAS 487
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT--DQRQKIISTINTIEN 337
+ + + + S L + +N+ + + I + + + ++
Sbjct: 488 RTNDRVGELSKAAARIGDVVELISTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKA 547
Query: 338 ITSNLNDSSQKFAELMSKINN-----ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ ++ + + +S I + A++E + + T E+
Sbjct: 548 LAEQTAKATGEIGQQISNIQAATEQSVGAIREISGTIERLSEISSTVAAAVEQQGAATQE 607
Query: 393 IGNNLQNFS------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
I N+Q + + + D+Q + + + + +
Sbjct: 608 ISRNVQQAAHGTQRVSTNIGDVQRGASETGSASSQVLSAARSLSADSNRL 657
>gi|295835188|ref|ZP_06822121.1| sugar binding secreted protein [Streptomyces sp. SPB74]
gi|197697899|gb|EDY44832.1| sugar binding secreted protein [Streptomyces sp. SPB74]
Length = 439
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 32/364 (8%), Positives = 95/364 (26%), Gaps = 20/364 (5%)
Query: 37 PMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL-YP 95
+++ S GL V G+ VGR+ + D + I + +
Sbjct: 87 DYYPKLLQQLNSNSGL--GDVV---GVEVGRVKEVT-DTQADKFVDLSTSIDVGDWVSWK 140
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENT- 154
AT + + G ++ +F+ A R + +G
Sbjct: 141 EKQATTKDGAVIGAGTDIGPMSLCYRRDLFEQAGLPADRETVARAVAGGWEDYIKLGQEY 200
Query: 155 -------SKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + +S ++ + + + ++ + +++
Sbjct: 201 KKKAPEGTYFMDSASAMFNAVVSSNAEQYYDKSGKAVYKDSASVQQGWNLAAEVAGKKLS 260
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ ++ + T A +++ + + K+
Sbjct: 261 QGLAQFQDPWTNALRKGTIATVACPAWMAAQISTNSGDAFKGKWDIAKAPGDTAANWGGS 320
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ + ++ L+ ++ + +T + + + +
Sbjct: 321 FLSVPKGGKHVKEATALVKWLTAPEQQAKTFKAVGIFPSNKKAYDLADVKSATLPYFNNA 380
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
I I E K A + +I+ E ++ ++ I+
Sbjct: 381 PIGEIYAAEAQAIPEAVLGAKDAAIKDEISKQINNMEQRGTKP-----ADAWKAATQTID 435
Query: 388 RYIP 391
+ I
Sbjct: 436 KSIG 439
>gi|134046323|ref|YP_001097808.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C5]
gi|132663948|gb|ABO35594.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C5]
Length = 729
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 47/408 (11%), Positives = 124/408 (30%), Gaps = 17/408 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKAL 86
+L S ++ + + + V +G VG + + + +
Sbjct: 142 FLIISGAEASKYSDYKVDNANDALAICAVAPVYNSGKLVGSVALVDIVNKDDYWV----- 196
Query: 87 IRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINY 146
ATI + + T ++ + T Q + + +
Sbjct: 197 --DRVKQVTGNEATIFLKNVRISTTVQTNGRDATGTTASQEVYNKALNHQEHVGTATVLG 254
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + D + + E P I I ++A + ++
Sbjct: 255 QSYITKYSPIEDMDGNVVGMIFVGTPEGPFLAVINGIRNQIIIVALLGLLLSILIAMYTG 314
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS----NNFVKSSDQVIN 262
+ + ++ ++ Q L + N +K+ D
Sbjct: 315 RKITKPIEELKKGTSEFGNGNYDYKTSVKTGDELQELSDSFNGMAGNIKNLMKTMDMDKV 374
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ ++ K D + + A +A+ ++ + +T
Sbjct: 375 ELANLLNNVTNVMNNVAKGDFTARADENTENNTLQKAINTAVANVAQLIKDLREEVDLLT 434
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT 382
Q QK+ + + E + + +++ + AE S + + L+E + ++
Sbjct: 435 SQVQKVEDELKSAEETATQVTEAANQVAEASS--DQSAKLQEASDQLENTYGVAKEVYGA 492
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+E+ + IG N S++G+ ++N + ++Q N D+ +
Sbjct: 493 AEETVKAAEEIGEN----SENGVKKVENAITRMQSITNVIDELGKAIQ 536
>gi|86750655|ref|YP_487151.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
gi|86573683|gb|ABD08240.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
Length = 689
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 23/212 (10%), Positives = 57/212 (26%), Gaps = 6/212 (2%)
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ ++Q V E + S + + Q D + + ++ S +
Sbjct: 464 QASANVQSVASATEQMSSSISEISRQVQQSARIAGDAVDQARKTNGRIGELADAASRIGA 523
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ T A N+ + + ++ + + + S Q
Sbjct: 524 VVDLINTIAGQTNLLALNATIEAARAGDAGRGFAVVAQEVKALAEQTSKATGEISQQISG 583
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---- 406
+ ++ A++E + T E+ I N+Q +Q
Sbjct: 584 MQTATQESVGAIREIGGTIERMSEIASTIASAVEEQGAATQEIARNVQQAAQGTQQVSAN 643
Query: 407 --DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
D+Q + + R+ +
Sbjct: 644 ITDVQRGATETGTASTQVLAAAQSLSRDSNRL 675
>gi|206562639|ref|YP_002233402.1| putative methyl-accepting chemotaxis protein [Burkholderia
cenocepacia J2315]
gi|198038679|emb|CAR54639.1| putative methyl-accepting chemotaxis protein [Burkholderia
cenocepacia J2315]
Length = 620
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 46/416 (11%), Positives = 125/416 (30%), Gaps = 29/416 (6%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
WL+ G +V + +V G + +S V +G+P+G +
Sbjct: 138 WLTSFLSL-GKAYDVNMDREVTVGGYMMFINSRVELDGVPIG-------------AACMS 183
Query: 85 ALIR------PDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMIT 138
+ + + A + + I ++L K + + +
Sbjct: 184 LSVDALAKGISAYRIGDTGFAYLV-RPDGAIMMHRDTSLIDGKHFLKDESGLPGDASSTL 242
Query: 139 ATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHID 198
Y + ++ I+ S ++ P + + A + +
Sbjct: 243 LAGKPYAYLSYEGDGGARFIATSFIPELNAYVVVQVPQAELLGPVTRAIRSAALVAAVVG 302
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
+ + L++ + + + + + I S+ F +
Sbjct: 303 LGVALLVIWLVGRAIAAPIRRAATLLSEIASGQGDLTRRMTVESEDEIGQLSDAFNRFVS 362
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLENIADSTSNMRSSIS 316
+ VH +R + + +I +D ++ +S ++ + T+ +R++
Sbjct: 363 SLSTLVHRIRAASASIATGSAQIASGNADLSERTEGQSSNLERTASSMEEITAVVRNNTE 422
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA---Q 373
T + + + ++ ++ +I+ I + ++ S +
Sbjct: 423 TATTAAKMINGAADTAARGGQVVGEVVTTMEQISDASQRISEIIVMIDSISFQTNILALN 482
Query: 374 RAMHTFRD-TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
A+ R + + S NL S +I++L+ TV ++
Sbjct: 483 AAVEAARAGEQGRGFAVVASEVRNLAQRSAQAAKEIKSLIEHSAGTVGAGSRLVSE 538
>gi|116062151|dbj|BAF34706.1| fast skeletal myosin heavy chain isoform mMYH-11 [Oryzias latipes]
Length = 1939
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 91/296 (30%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + + + + + ++ E M
Sbjct: 1310 QAFTQQIEELKRHVEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1369
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1370 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEESIEAVNSKCASLEKTKQRLQGEV 1429
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 1430 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 1488
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I EN + ++A T +
Sbjct: 1489 KNSYEEALDQLETMKRENKNLQQEISDLTEQI------GENGKSIHELEKAKKTVENEKI 1542
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
++ + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 1543 ELQTALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEMEQIKRNSQRVI 1598
>gi|148657870|ref|YP_001278075.1| multi-sensor signal transduction histidine kinase [Roseiflexus sp.
RS-1]
gi|148569980|gb|ABQ92125.1| multi-sensor signal transduction histidine kinase [Roseiflexus sp.
RS-1]
Length = 1039
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 32/356 (8%), Positives = 85/356 (23%), Gaps = 17/356 (4%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
+ VR G+ VG L + D L I ++ T
Sbjct: 342 YIGAPVRMRGVTVGT---LCFASATSRQTPFT---DGDYDLIRLMAQWIGSEQERLQTEA 395
Query: 113 ELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENI 172
L + + + TE + + +++ S E
Sbjct: 396 ALRESEERFALLASVTTEGVIISEQGIIVDANAAASTLLGCPLEQLRGRSVFEFTTPEGR 455
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
EK + V + T ++ + +
Sbjct: 456 EKVAHALATGYDCPYEV----------LARRIDGTLFPAEVTGRNIPYHGRTARVTTIRD 505
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-DHLLSDFSSK 291
+ L + ++ +QV + ++I ++
Sbjct: 506 MSRQRLAEAALRASEERFRQLAENVNQVFWICTPALDQILYVNPAYERIWGRSCDSLYAQ 565
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
S + LE+ + + I Q ++ I + + +
Sbjct: 566 PASLFEAIVLEDRERVLALHNAEYHRGYSIEFQIRRDDGQPRWILTRAFPVMNEAGVIYR 625
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
+ + +++ ++ + A+ +++ + +I + D
Sbjct: 626 IAAISEDVTGRRQAEEELRATLAALEAQYQAADRAQSEMRAILDASSEAIALLAPD 681
>gi|90424869|ref|YP_533239.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB18]
gi|90106883|gb|ABD88920.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB18]
Length = 587
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 25/279 (8%), Positives = 70/279 (25%), Gaps = 8/279 (2%)
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+ + + + + + + S + + ++
Sbjct: 308 RDMMKLANEFEGAVGEIVETVSSASAELESSASTLTSTAEHAQHLATMVASASEEATTNV 367
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
Q V E + S + + + Q ++ S ++
Sbjct: 368 QSVASATEEMSSSITEISRQVQMSARIAGEAVQQAQKTNNRVGELAKAASRIGDVVELIN 427
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
T A N+ + + ++ + + + Q +
Sbjct: 428 TIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKATGEIGQQITGIQAATQ 487
Query: 357 NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ------SGLNDIQN 410
++ A++E T E+ I N+Q +Q S + D+Q
Sbjct: 488 ESVGAIREIGDTISKMSEIASTIAAAVEQQGAATQEISRNVQQAAQGTHEVSSNITDVQR 547
Query: 411 LVRKLQETVNHFDDCLNNFERNPQDIV--WGREKGSVKI 447
+ + + R+ + G+ +V+
Sbjct: 548 GASETGTASSQVLSAAQSLSRDSNRLKVEVGKFLQTVRS 586
>gi|134292308|ref|YP_001116044.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Burkholderia vietnamiensis G4]
gi|134135465|gb|ABO56579.1| methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor
[Burkholderia vietnamiensis G4]
Length = 514
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 20/364 (5%), Positives = 90/364 (24%), Gaps = 4/364 (1%)
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ D ++ +T A + + + +R
Sbjct: 7 VTQQEFDFPDDVTLMSTTDADSIITYANTTFAYVSGFSTDELVGQPHNIVRHPDMPKEAF 66
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
A + + +N ++ + + T + +
Sbjct: 67 ADMWATLKNGEPWTALVKNRRNNGDHYWVRANAVPVMRNGAPHGYMSVRTKAPRDEIAGT 126
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
L ++ ++ ++ A+ + I
Sbjct: 127 EALYRAFREGKAGSRRFHKGLIVRTGLMRIVSLPQTMSVRARVHSALAVLAPVVIGTGWA 186
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD-FSSKMKSKETSAFLENIAD 306
++ + V ++ Q + L + + + + +
Sbjct: 187 CGLGGGALAALAAVTAGASVAAGLWLDAQIVQPLKRLHDQALNVATGASRRGVAMNRVDE 246
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
+R+ + ++ ++ ++ + + + + S+++E
Sbjct: 247 IGMTLRTINQLGLMFRWLVDDVSEQVHNVQRASNEIAQGNNDLSARTEQ--AASSVQETA 304
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCL 426
+ + + + +T+ + N+ S + ++++ + + + D +
Sbjct: 305 ASMAEMTATVSSNAETALQANQLSVSASEAAER-GGQAVSEVVMTMNDITASSRKIADII 363
Query: 427 NNFE 430
+
Sbjct: 364 GVID 367
>gi|212541328|ref|XP_002150819.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
gi|210068118|gb|EEA22210.1| conserved hypothetical protein [Penicillium marneffei ATCC 18224]
Length = 1202
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 20/297 (6%), Positives = 91/297 (30%), Gaps = 20/297 (6%)
Query: 152 ENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS 211
E +++ + + + + E+ + T + + +++ + + +
Sbjct: 636 ERYNEREKELLDEQETLKSSWEEKHRELEEAHSNLQTEHDDKHAELERTLADLEAAKNDL 695
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + ++ + LE ++ + ++ ++++ T +++ T
Sbjct: 696 QAVRDSFVSKSEDLETKEKELETTKTELEEKLEEVKKAQDDVHYKQEELLATQAELQSTL 755
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
+ +++ ++ + + + + +
Sbjct: 756 EELVTKKAELEAKHAELEDTHRK-----------------HAEENGQLIGSHFSELDNIR 798
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM--HTFRDTSEKINRY 389
I +L + + +S + A++ M + +++
Sbjct: 799 DVHATEINDLRITHETNTKDLQRRFDKLSKDFDEKERTWAAEKTMLQRQLHEKLDELAG- 857
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
I + L+ +Q+ V +++ T+++ ++ + Q + + S K
Sbjct: 858 IEREKDALERDDVVRERHLQSAVEEMRRTIDNMENDREKLRKTLQSLGEATDLKSSK 914
>gi|186915|gb|AAA59487.1| laminin B1 [Homo sapiens]
Length = 434
Score = 39.5 bits (89), Expect = 1.2, Method: Composition-based stats.
Identities = 26/218 (11%), Positives = 73/218 (33%), Gaps = 12/218 (5%)
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
Q V L ++ S ++ + + +K+D +
Sbjct: 167 QKAMDLDQDVLSALAEVEQLSKMVSEAKVRADEAKQSAEDILLKTNATKEKMDKSNEELR 226
Query: 290 ----------SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ + S M S+ ++ +T+ ++ + +++ +E I
Sbjct: 227 NLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVIL 286
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQ 398
+ + L+ + S + + D + A+ + I ++Q
Sbjct: 287 QHSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDIQ 346
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ L I++ +ET+ + ++ ERN +++
Sbjct: 347 G-TQNLLTSIESETAASEETLFNASQRISELERNVEEL 383
>gi|269967588|ref|ZP_06181640.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
gi|269827826|gb|EEZ82108.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
Length = 710
Score = 39.5 bits (89), Expect = 1.3, Method: Composition-based stats.
Identities = 29/265 (10%), Positives = 73/265 (27%), Gaps = 7/265 (2%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ L + + G V I +P + G + + + GI +G++ L L E LA
Sbjct: 98 FRLYKDLKTAGRGIAVKIVLPDDSKISG--EGAPIMYRGIEIGQVTDLSLS-EGREVILA 154
Query: 84 KALIRPDT--PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATP 141
A I+P L T + ++ ++ L + R
Sbjct: 155 SAAIQPAFSDMLTTGTRFVLEEAKVSLSGVENIANLVRGNFLTIVPGAGERSRRFTAIRK 214
Query: 142 SGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMM 201
+ N + +S + + +I + + + ++
Sbjct: 215 NVFNQQQEKSIAIRLVSDNSFGLDSGANVLYKGIVVGSIIKVGLVKEDKKSQHEVFMDVL 274
Query: 202 HTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVI 261
+ + + T + + + + +I S +
Sbjct: 275 IDHEYKHLIKSNNRFYVTGSASAELTESGLSVTVPPAKQLLTGSISFVSEGKQDIQKEYQ 334
Query: 262 NTVHDVRETTQTFQEVGQKIDHLLS 286
++ + + G + L +
Sbjct: 335 LFQNESLAELAQYNQSGSRALTLFA 359
>gi|316933588|ref|YP_004108570.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris DX-1]
gi|315601302|gb|ADU43837.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris DX-1]
Length = 672
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 24/233 (10%), Positives = 65/233 (27%), Gaps = 8/233 (3%)
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + ++Q V E + S N + ++ + + ++
Sbjct: 438 TTMVAAASEEASTNVQSVASATEELSSSVNEISRQVQDSARMANEAVSQARMTNDRVGEL 497
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
S ++ A N+ + + ++ + + +
Sbjct: 498 ATAASRIGDVVELINQIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALAEQTAKAT 557
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ S Q + ++ A+++ +S + T E+ I N+Q +
Sbjct: 558 GDISQQISGIQAATQESVGAIRDISSTIEKLSEIASTIASAVEEQGAATQEISRNVQQAA 617
Query: 402 QSGL------NDIQNLVRKLQETVNHFDDCLNNFERNPQDIV--WGREKGSVK 446
Q ND+Q + + + GR +V+
Sbjct: 618 QGTQQVSSNINDVQRGATETGSASAQVLSAARTLSSDSNRLRSEVGRFLSTVR 670
>gi|257053605|ref|YP_003131438.1| hypothetical protein Huta_2541 [Halorhabdus utahensis DSM 12940]
gi|256692368|gb|ACV12705.1| conserved hypothetical protein [Halorhabdus utahensis DSM 12940]
Length = 381
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 26/363 (7%), Positives = 85/363 (23%), Gaps = 18/363 (4%)
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT-IRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + +R D P + G Y + +
Sbjct: 32 VPAIAFRIQSQRIEPVTVRLRDDVP--EDVAVEDLGFHPEYGSEYWTIDDDEITFEREID 89
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+E I AT + + + + IA
Sbjct: 90 TDSEYTTVYGIRATGTDDVEKFLTEPEIESVDPPLEDEGDLVDDASTDVVRDVIAGDSES 149
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
L + ++ + + ++ + + +
Sbjct: 150 VPGLEETDDEEIETLNLADPNDSGETADADSTDGEGGDDEVGQVQPGSVAKTLAAEIRQD 209
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
V ++ Q + +SD ++ +
Sbjct: 210 AVDDAALRVLKQELDLGGGGGDTDGSAVDARIQHLQSEMSDLAAYTTAL----------- 258
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI-NNISALKEN 365
+ + I + + ++ ++ + + LN S + +N + E
Sbjct: 259 -EEFLEENGQGEELIEEFQGRLEEFQGELDGVRNELNSMSGDVDSVEQTASSNAETVSEL 317
Query: 366 NSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG--LNDIQNLVRKLQETVNHFD 423
+ + + + + + + ++ + L L+ +++ + +L E
Sbjct: 318 DEEVDSIDETVDSLDEEVDGLREEVEAMSDQLGEDGDLADRLDSVESEIEELNEWREQLS 377
Query: 424 DCL 426
+
Sbjct: 378 SVI 380
>gi|154285748|ref|XP_001543669.1| vacuolar ATP synthase 16 kDa proteolipid subunit 2 [Ajellomyces
capsulatus NAm1]
gi|150407310|gb|EDN02851.1| vacuolar ATP synthase 16 kDa proteolipid subunit 2 [Ajellomyces
capsulatus NAm1]
Length = 95
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 8/64 (12%), Positives = 18/64 (28%), Gaps = 1/64 (1%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ ++ ++ + GLS S G +G + + LD
Sbjct: 4 IIAVYGLVVAVLIAGGLGPPPQKTYSLYTGFMHLAAGLSVGLSGLAAGYTIGVVGDV-LD 62
Query: 75 QEYP 78
+
Sbjct: 63 RRTD 66
>gi|160873172|ref|YP_001552488.1| peptidase M23B [Shewanella baltica OS195]
gi|160858694|gb|ABX47228.1| peptidase M23B [Shewanella baltica OS195]
Length = 362
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 18/187 (9%), Positives = 59/187 (31%), Gaps = 10/187 (5%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
+ + + ++ + + S++ + ++ + + +
Sbjct: 62 NSTKNSLAQIDTKLTELKQRQDELETLKVSQQ-QTLSKQLSSAYLAGNHDYTKMMLNQQS 120
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNI-----SALKENNSLFKDAQRAMHTF 379
I + + + S + + +++++ I S K+ L + Q
Sbjct: 121 PATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQTSKQKQLTKLVAEQQVQAKRL 180
Query: 380 RDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ R I + L + +++ L + + L + NP +G
Sbjct: 181 SQEQDQRQRTITELQRTLNSKGA----ELEQLQIEEASLKRVVEQALRAMKDNPSMEGFG 236
Query: 440 REKGSVK 446
++ G +K
Sbjct: 237 KQSGKLK 243
>gi|325093952|gb|EGC47262.1| vacuolar ATPase proteolipid subunit c [Ajellomyces capsulatus H88]
Length = 149
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 16/59 (27%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+ ++ ++ + GLS S G +G + + +
Sbjct: 53 IIAVYGLVVAVLIAGGLGPPPQKTYSLYTGFMHLAAGLSVGLSGLAAGYTIGVVGDVGV 111
>gi|319783790|ref|YP_004143266.1| kinesin-like protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169678|gb|ADV13216.1| kinesin-like protein [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 2101
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 29/230 (12%), Positives = 61/230 (26%), Gaps = 3/230 (1%)
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
S I + +I+ + + KS+ V + +
Sbjct: 1132 SDAIAADVEKIEQAFSRQTGIIEERAGTMERALSTGVDNVRAVLEKSAVFVAGALREKVL 1191
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ +D ++++TSA L A+ + +
Sbjct: 1192 EVTSTLHEQAGAAFSDADRKIAERAEQTSAALLARAEDIARTFEEADRRLHARAEDTSNA 1251
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKEN--NSLFKDAQRAMHTFRDTS-EKI 386
+ +S L + + +L ++ N I+ E L AQ + +
Sbjct: 1252 LLARADDTSSSLLARAHETADQLAARANQIAGTFEAADQKLAARAQETADQLTARAQDTA 1311
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ F + + + Q D L NFE Q +
Sbjct: 1312 DHLAARASEIAGTFDAADQKLVARAIETAQSLAARAGDILRNFEGADQRL 1361
>gi|225554549|gb|EEH02846.1| vacuolar ATPase proteolipid subunit c [Ajellomyces capsulatus
G186AR]
Length = 155
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 6/59 (10%), Positives = 16/59 (27%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+ ++ ++ + GLS S G +G + + +
Sbjct: 59 IIAVYGLVVAVLIAGGLGPPPQKTYSLYTGFMHLAAGLSVGLSGLAAGYTIGVVGDVGV 117
>gi|242010332|ref|XP_002425922.1| Nesprin-1, putative [Pediculus humanus corporis]
gi|212509905|gb|EEB13184.1| Nesprin-1, putative [Pediculus humanus corporis]
Length = 8614
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 26/279 (9%), Positives = 83/279 (29%), Gaps = 6/279 (2%)
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
T + + ++ + + +
Sbjct: 6271 TDGAQRRMLDLEQAMHVAKDFQDKLVPIVEWLDKAEKRIKEMELVPTDEEKIQDRIKEHE 6330
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRET-TQTFQEVGQKIDHLLSDFSSKMKSK 295
++IL + + D T E + L + + +
Sbjct: 6331 DLHSEILRKKPTLMELTEVADTLMSLVGEDEAATVADKLSETADRYSVLCDNSDAVGQLL 6390
Query: 296 ETSA-FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
E S L ++ + +++ + + + + + + + +L + +++ ++ +
Sbjct: 6391 EASRAGLRHLVLTYQELQAWMETMEKRLNTHRALGVHTEKLLQQMDDLANLTEEISDRHT 6450
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRY---IPSIGNNLQNFSQSGLNDIQNL 411
++++ A+ +D + + R + S G+ L +Q L +Q
Sbjct: 6451 QVDSTVDAGLELMKHISNDEAIQ-LKDKLDSLQRRYNDLTSRGSELLKNAQEALPLVQQF 6509
Query: 412 VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
V+ + +R P+ R +G ++ ++P
Sbjct: 6510 HNSHHRLVDWMMGAESQLQREPRQEDIERLEGDIQEFRP 6548
>gi|145549097|ref|XP_001460228.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428057|emb|CAK92831.1| unnamed protein product [Paramecium tetraurelia]
Length = 545
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 34/315 (10%), Positives = 92/315 (29%), Gaps = 12/315 (3%)
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+ A K + + + ++ + N +
Sbjct: 64 CHLDQAVGNLYKKYEEQVNDKIKEFEGQQKQKEILEQNRIKELEQRFNQYDDIIKELDKK 123
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
S+D +L+T+ + +D ++ +++ N H
Sbjct: 124 WESKSNDRYIASIIQKNLLTNQNIGQFIVDKVLKLTEETVQNKLNDYQKLIDERMTNQFH 183
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
+ ++ K D L + + + + + ++S+
Sbjct: 184 QLSNYQIQIRKCETKQDELQNQLNISKEFQMDFQKQQQKKLQVLQHQNSLFKEVVQQQVH 243
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE- 384
I + + NI ++F + + + + ++ L Q+ + +
Sbjct: 244 NIIEQSELSKLNIKDLREQMIKQFED--ASVGKLENNEQIMHLLTQDQQKIRELERKQDL 301
Query: 385 ------KINRYIPSIGNNLQNFSQSGLNDIQNL---VRKLQETVNHFDDCLNNFERNPQD 435
+I + I + +Q LN I + ++ + +N + +N NPQ
Sbjct: 302 IFKNENEIKFKLEQIQQDYSQQNQRALNQIVTMDSEMKNINSAINGIYEKVNTITLNPQA 361
Query: 436 IVWGREKGSVKIYKP 450
I + + + +KP
Sbjct: 362 IPEKQPEKPQEKFKP 376
>gi|323498380|ref|ZP_08103380.1| methyl-accepting chemotaxis protein [Vibrio sinaloensis DSM 21326]
gi|323316622|gb|EGA69633.1| methyl-accepting chemotaxis protein [Vibrio sinaloensis DSM 21326]
Length = 467
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 21/236 (8%), Positives = 74/236 (31%), Gaps = 8/236 (3%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + ++ + + K +++ N V +
Sbjct: 133 YYIMTFIGGAMFTMNKALTTLSDGDLTSRMNFFKVRDEFSEIAITIDKVAEREQNMVLSI 192
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+E+ Q++ ++ L + ++++ + + + + D +
Sbjct: 193 QESIALMQQISSDLN-LSNQNTAEISGTQQEHLNSLASATEQMASTIREVANLAHDSSSQ 251
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKI 386
+ + + + + ++L ++ + S A+ E ++ + T SE+
Sbjct: 252 TENARSVAQQGQQKVGHTLSSISQLSGEVQSASEAVAELDANAAQIDEVVTTINGISEQT 311
Query: 387 NRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
N + + G ++++ L + Q+ + +RN Q +
Sbjct: 312 NLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQQATVEIQSMIEALQRNSQSL 367
>gi|253751131|ref|YP_003024272.1| hypothetical protein SSUSC84_0217 [Streptococcus suis SC84]
gi|253753032|ref|YP_003026172.1| membrane protein [Streptococcus suis P1/7]
gi|253754855|ref|YP_003027995.1| membrane protein [Streptococcus suis BM407]
gi|251815420|emb|CAZ50995.1| putative membrane protein [Streptococcus suis SC84]
gi|251817319|emb|CAZ55051.1| putative membrane protein [Streptococcus suis BM407]
gi|251819277|emb|CAR44577.1| putative membrane protein [Streptococcus suis P1/7]
gi|292557687|gb|ADE30688.1| Bacteriocin-associated integral membrane protein [Streptococcus
suis GZ1]
gi|319757396|gb|ADV69338.1| hypothetical protein SSUJS14_0233 [Streptococcus suis JS14]
Length = 661
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G FV+ + WL +++ SV LS V ++ +
Sbjct: 3 GKFVLVSTIILAVFMIWLGV-----SQKETMLVHYYPSVTTLSVSEDVTYSDVR 51
>gi|58039232|ref|YP_191196.1| methyl-accepting chemotaxis protein [Gluconobacter oxydans 621H]
gi|58001646|gb|AAW60540.1| Methyl-accepting chemotaxis protein [Gluconobacter oxydans 621H]
Length = 458
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/216 (9%), Positives = 59/216 (27%), Gaps = 3/216 (1%)
Query: 217 FNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQE 276
I + + + + + + + T E
Sbjct: 214 VQQIDPALENGSTRMSGAFHRACEGLGRIVHAVRETSGAVEQRAREISGSTENITCRIAE 273
Query: 277 VGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIE 336
+ + + + S + + + + + D K + + I
Sbjct: 274 QVDALAAVARNITELTSS--VKEVADEARQADTTVADCCQETEQGRDIVAKTVEAMAKIS 331
Query: 337 NITSNLNDSSQKFAELMSKINNISALKENNSL-FKDAQRAMHTFRDTSEKINRYIPSIGN 395
+ ++ + E+ + N ++ + DA R + + +
Sbjct: 332 SSSNRIVQIIGVIDEIAFQTNLLALNAGVEAAHAGDAGRGFAVVAQEIRALAQRSATAAK 391
Query: 396 NLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+++ S + D+Q V+ + ET + + ER
Sbjct: 392 EIKSLIASSMEDVQRGVQMVDETGTALGNISTSVER 427
>gi|90578628|ref|ZP_01234438.1| hypothetical paraquat-inducible protein B [Vibrio angustum S14]
gi|90439461|gb|EAS64642.1| hypothetical paraquat-inducible protein B [Vibrio angustum S14]
Length = 875
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
S + + G+ +G+I + LD E N +A A I P Y ++ + +
Sbjct: 298 GSPIMYRGLQIGKITDVSLD-EKTNKIIAHAAIEPSMREYLNSGSRL 343
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 14/135 (10%), Positives = 37/135 (27%), Gaps = 3/135 (2%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL-DQEYPNHSLAK 84
+ L + ++ + I+ D +S + + + I VG++V + L D A+
Sbjct: 733 FKLGSAELFNSRVT--IVLESEERDSISEGTPLLYRDIQVGQVVDISLGDLADRVIIKAQ 790
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + +T + I + ++ + P
Sbjct: 791 LEKQYRHLVRKNTVFWNTSGVNVDIGITGANIKAGTFDSLLRGGIAFATPEKQPLEPQVK 850
Query: 145 NYFISNAENTSKKIS 159
+
Sbjct: 851 AGTHFLLHKEANPKW 865
Score = 36.4 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRP 89
+ + I +V GL +++R+ G+ VG + + L ++ + A I P
Sbjct: 40 YKSVNEAGERIQIHFNDAV-GLVAGRTTIRYQGLEVGIVRDVSLSKDLKS-IYVTADIYP 97
Query: 90 DT--PLYPSTTATI 101
+ L +T +
Sbjct: 98 EAVNILRKNTRFWL 111
>gi|2351221|dbj|BAA22068.1| myosin heavy chain [Cyprinus carpio]
Length = 1931
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 25/200 (12%), Positives = 71/200 (35%), Gaps = 5/200 (2%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q L++ + S + T ++ + G++ + L ++ K ++ +
Sbjct: 1393 QRLQDAEESIEAVSSKCASLEKTKQRLQGEVEDLMIDGERANALAANLDKKQRNFDKVLA 1452
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ +A +E ++ N+ E +L ++ L +I+++S
Sbjct: 1453 EWK-QKYEESQAELEAAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLS 1511
Query: 361 -ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQ 416
L E + ++A +I + + L++ L ++ + ++
Sbjct: 1512 EQLGETGKSIHELEKAKKIVESEKAEIQTALEEAESTLEHEESKILRVQLELNQVKSEID 1571
Query: 417 ETVNHFDDCLNNFERNPQDI 436
+ D+ + +RN Q +
Sbjct: 1572 RKLAEKDEEIEQIKRNSQRV 1591
>gi|23014127|ref|ZP_00053961.1| COG0840: Methyl-accepting chemotaxis protein [Magnetospirillum
magnetotacticum MS-1]
Length = 665
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 28/419 (6%), Positives = 88/419 (21%), Gaps = 37/419 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F L L + S
Sbjct: 9 IFAAVGLVGLAAIAMALVGIRSM--ATYHQHVMEMESAS--------------------- 45
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
++ + + ++G+ + + R
Sbjct: 46 -------QRAVIGEKVNGLI-----NAVVMDSRGVYMSRDAKEAEKYAPAILKNTAEISR 93
Query: 132 NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLA 191
P A + + + + + ++ + + +
Sbjct: 94 LMSQWSAMVPEAERAAFKPAADQADQFAKFRAELVRLGREVGTTEARAFGDNDANRANRQ 153
Query: 192 NNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN 251
HI+ + + L + + + + S
Sbjct: 154 ALNKHIEVLAAANAAKVTELVQGLDEFYESRLQAMIWLAVLGLASGIGWAAWTAFKRVSQ 213
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ + + E +I + + + + +
Sbjct: 214 PINRMTAVMETLAGGNLSMEIPSVESHDEIGDMARSVRVFRDAMRDAERMRTAQEEDRAT 273
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK- 370
+ + T +E + + + + ++ + + ++ +
Sbjct: 274 AQAERIAALQNMAETVELETRAAVEQVAAQTSLMADNAGKMAASAGAVGGNSQSVAAAAT 333
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
A T +E+++ I IG + N Q + K Q+T+ +N
Sbjct: 334 QALSNAQTVSAAAEELSASIREIGEQIANAGQVTGGAV-TAAGKAQDTITRLSAAVNRI 391
>gi|261210889|ref|ZP_05925179.1| methyl-accepting chemotaxis sensory transducer [Vibrio sp. RC341]
gi|260839864|gb|EEX66464.1| methyl-accepting chemotaxis sensory transducer [Vibrio sp. RC341]
Length = 638
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 42/405 (10%), Positives = 117/405 (28%), Gaps = 10/405 (2%)
Query: 42 IIRIPGSVDGLSTDS--SVRFNGIPVGRIV-GLFLDQEYPNHSLAKALIRPDTPLYPSTT 98
++ + V GL V + G +G + GL Q + K + L+ +
Sbjct: 150 VMGLENGVAGLGNRGVVPVFYEGKLIGSVEFGLSFGQPFFESFKQKYQVDIALLLHSESN 209
Query: 99 ATIRTQGLAGITYIELSTLRK--EKKTIFQIATERNQRAMITATPSGINYFISNAENTSK 156
+ G + T+ ++ E + + S ++ +
Sbjct: 210 RYQQFAGTFDASPWIDQTVLDAVFTGQSRKLDVEISGKNYALYLQSVKDFSGKPIGVLTI 269
Query: 157 KISDSSR----HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ S + + TI I I +D ++ D
Sbjct: 270 AMDRSEAIASVWDVNLKLVGLGVVALTIGIIIAILIARGITRPIVDATQAMKRIAEGDGD 329
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ T + + + K++ + I ++ V S+D+ R +
Sbjct: 330 LSQQMSVKTRDEMAQLARAFNLFVGKIHDTMAQISDVTHQLVISADETARITETSRASAT 389
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
Q +++ ++ + + + ++ + + ++ I
Sbjct: 390 KQQSEVEQVATAMNQV-AITVQEMAQHANMASDSAAQADAATTTGKQIVSQVIALIEELA 448
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
+ + +++ + S + I + + +L + +
Sbjct: 449 TKSQEAVLTMGKLNKQTQSIDSVLEVIRNIADQTNLLALNAAIEAARAGEQGRGFAVVAD 508
Query: 393 IGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
L + +Q+ +IQ ++ LQ N + + ++ + V
Sbjct: 509 EVRTLASRTQTSTQEIQRMIESLQGAANSAESAMLQSDKITEQCV 553
>gi|27377617|ref|NP_769146.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
gi|27350762|dbj|BAC47771.1| blr2506 [Bradyrhizobium japonicum USDA 110]
Length = 748
Score = 39.1 bits (88), Expect = 1.3, Method: Composition-based stats.
Identities = 20/291 (6%), Positives = 76/291 (26%), Gaps = 8/291 (2%)
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
N + ++ E + + + + + + + + +
Sbjct: 445 NMVDTERMRAEQVEVEARQAEGRKKDMVRLADQFEQAVGEIVDTVSSASNELEASAGTLT 504
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + + + ++Q V E + S + + + +
Sbjct: 505 TTASRAQDLSTEVASASQEASANVQAVASATEELSSSVSEIARQVQESARIASEAVGQAS 564
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ ++ + ++ T A N+ + + ++ +
Sbjct: 565 RTNDRVGELSKAAARIGDVVELISTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKA 624
Query: 333 NTIENITSNLNDSSQKFAELMSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
E + Q+ + + + + A++E + + T E+
Sbjct: 625 LA-EQTAKATGEIGQQISNIQAATEQSVGAIREISGTIERLSEISSTVAAAVEQQGAATQ 683
Query: 392 SIGNNLQNFS------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
I N+Q + + + D+Q + + + + +
Sbjct: 684 EISRNVQQAAHGTQRVSTNIGDVQRGASETGSASSQVLSAARSLSADSNRL 734
>gi|315265397|gb|ADT92250.1| Peptidase M23 [Shewanella baltica OS678]
Length = 378
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 18/187 (9%), Positives = 59/187 (31%), Gaps = 10/187 (5%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
+ + + ++ + + S++ + ++ + + +
Sbjct: 78 NSTKNSLAQIDTKLTELKQRQDELETLKVSQQ-QTLSKQLSSAYLAGNHDYTKMMLNQQS 136
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNI-----SALKENNSLFKDAQRAMHTF 379
I + + + S + + +++++ I S K+ L + Q
Sbjct: 137 PATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQTSKQKQLTKLVAEQQVQAKRL 196
Query: 380 RDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ R I + L + +++ L + + L + NP +G
Sbjct: 197 SQEQDQRQRTITELQRTLNSKGA----ELEQLQIEEASLKRVVEQALRAMKDNPSMEGFG 252
Query: 440 REKGSVK 446
++ G +K
Sbjct: 253 KQSGKLK 259
>gi|270618731|ref|ZP_06221766.1| hypothetical protein HAINFHK1212_1666 [Haemophilus influenzae
HK1212]
gi|270317919|gb|EFA29238.1| hypothetical protein HAINFHK1212_1666 [Haemophilus influenzae
HK1212]
Length = 137
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISAFWLLPFIALCIGAILFF-------QIVKERGTSITITFT-NGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
>gi|262171616|ref|ZP_06039294.1| methyl-accepting chemotaxis protein [Vibrio mimicus MB-451]
gi|261892692|gb|EEY38678.1| methyl-accepting chemotaxis protein [Vibrio mimicus MB-451]
Length = 467
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 69/244 (28%), Gaps = 8/244 (3%)
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ + + + + F K + +
Sbjct: 125 LLVMAAGVYYIMTFIGGAMYSLHKALETLGKGDLTYRMNYFPVRDEFSEIAITFDKVAQR 184
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
VH ++E+ Q++ ++ L + S+ + + + +
Sbjct: 185 EQKLVHSIQESVALMQQISSDLN-LSAQSSASASESQQEHLNSLASATEQMASTIREVAG 243
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHT 378
D Q+ + + + + +L +I + S A+ E +S + T
Sbjct: 244 LAHDSSQQTEEAKRVANSGQAKVTQTLTSVGQLAREIGSASHAVTELDSNAAQIDAVVTT 303
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERN 432
SE+ N + + G ++++ L + Q + +RN
Sbjct: 304 INAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQSATVEIQSMIEALQRN 363
Query: 433 PQDI 436
Q +
Sbjct: 364 SQSL 367
>gi|258627563|ref|ZP_05722340.1| Methyl-accepting chemotaxis protein [Vibrio mimicus VM603]
gi|258580145|gb|EEW05117.1| Methyl-accepting chemotaxis protein [Vibrio mimicus VM603]
Length = 467
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 69/244 (28%), Gaps = 8/244 (3%)
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ + + + + F K + +
Sbjct: 125 LLVMAAGVYYIMTFIGGAMYSLHKALETLGKGDLTYRMNYFPVRDEFSEIAITFDKVAQR 184
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
VH ++E+ Q++ ++ L + S+ + + + +
Sbjct: 185 EQKLVHSIQESVALMQQISSDLN-LSAQSSASASESQQEHLNSLASATEQMASTIREVAG 243
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHT 378
D Q+ + + + + +L +I + S A+ E +S + T
Sbjct: 244 LAHDSSQQTEEAKRVANSGQAKVTQTLTSVGQLAREIGSASHAVTELDSNAAQIDAVVTT 303
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERN 432
SE+ N + + G ++++ L + Q + +RN
Sbjct: 304 INAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQSATVEIQSMIEALQRN 363
Query: 433 PQDI 436
Q +
Sbjct: 364 SQSL 367
>gi|116075559|ref|ZP_01472818.1| possible ABC transporter [Synechococcus sp. RS9916]
gi|116066874|gb|EAU72629.1| possible ABC transporter [Synechococcus sp. RS9916]
Length = 279
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Query: 18 LFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+ ++ WL + V GL+ S V + GI
Sbjct: 1 MVGFTGTMLWLRG-ERLGAETWTVTANF-ADAAGLAERSPVTYRGI 44
>gi|322708014|gb|EFY99591.1| spindle-pole body protein (Pcp1), putative [Metarhizium anisopliae
ARSEF 23]
Length = 1286
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 32/290 (11%), Positives = 90/290 (31%), Gaps = 17/290 (5%)
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
++ +E E ETI + +++ + + K+
Sbjct: 351 QREAQRRMSEMEGAENQNEELEETRETIQDLELTIRRLEEQVEDFKEKADQAMSQKDRAE 410
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
+ + + + Q+ E + KS + + ++ + +++
Sbjct: 411 SDLEELQEEMANKSVVTKGLSRQVEEKVSRLQEELDKSGKEYADLEKELAGANEENEQLR 470
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENI 338
++D L ++ + + + ++ + + ++ + K+ E +
Sbjct: 471 AEVDELRNEQQEIRRGQHDDSAKVRGLEAELLAVADEKDLLQVRHETLKV-----ESEAL 525
Query: 339 TSNLNDSSQKFAELMSKINNIS--ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN 396
N+ ++ EL +++ A++ L + Q + D + + N
Sbjct: 526 QRNVQQLEKEVEELQKNVSDEREYAVEIEKDLRQQYQDELERLNDAVSDLQAEVRERDNL 585
Query: 397 LQNFSQSGLNDIQNLVRK----------LQETVNHFDDCLNNFERNPQDI 436
N S+ N+ Q LV + LQ T+ + N +
Sbjct: 586 YDNDSEKWENEKQALVSERERAEEKAAGLQRTIERLREAEGNLSNKESTL 635
>gi|86747615|ref|YP_484111.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
gi|86570643|gb|ABD05200.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
Length = 564
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 22/203 (10%), Positives = 56/203 (27%), Gaps = 8/203 (3%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
E + S N + + +D + + + + S ++ T A
Sbjct: 349 SATEEMASSVNEISRQVQESARIANDAVDQARKTNDSVGMLSAAASRIGDVVELINTIAG 408
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN-I 359
N+ + + ++ + E + Q+ + + + + +
Sbjct: 409 QTNLLALNATIEAARAGEAGRGFAVVASEVKALA-EQTAKATGEIGQQISGIQAATDQSV 467
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------DIQNLVR 413
SA+KE T E+ I N+Q +Q D+Q
Sbjct: 468 SAIKEIGMTIGRMSEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSANITDVQRGAS 527
Query: 414 KLQETVNHFDDCLNNFERNPQDI 436
+ + + ++ +
Sbjct: 528 ETGSASSQVLSAAKSLSQDSNRL 550
>gi|90410338|ref|ZP_01218354.1| hypothetical paraquat-inducible protein B [Photobacterium profundum
3TCK]
gi|90328579|gb|EAS44863.1| hypothetical paraquat-inducible protein B [Photobacterium profundum
3TCK]
Length = 875
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 12/120 (10%), Positives = 30/120 (25%), Gaps = 3/120 (2%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTAT 100
I +S + + + I VG+++ + L + + L K I + + T
Sbjct: 748 ILESEDRGSVSEGTPLLYRDIQVGQVIKVSL-GDLSDRVLIKIQIEKEYSHLIRTDTVFW 806
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ I ++ + +P +
Sbjct: 807 NTSGVDFTIGLTGAKIQTGTVDSLLRGGISFATPEEQPLSPLAKQEDHFLLHREADDRWK 866
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 13/157 (8%), Positives = 36/157 (22%), Gaps = 1/157 (0%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ G+ S +R G+ VGR+ + + + + + ++ I
Sbjct: 399 ALYANNSYGIERGSKLRHRGLDVGRVKKVSFEGNRVRF-DVIVRPQYTSLVRSNSRFFID 457
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSS 162
A I+ + + + S Y N +
Sbjct: 458 GGIQASISAKGIDVSMPPADQLISNGISFTSSGSKSIQNSYPLYENKRLSNLAADNQRGF 517
Query: 163 RHIQKIIENIEKPLTTTIANIETISTVLANNISHIDK 199
+ + + + + +
Sbjct: 518 AKYSLFADELPPVSEGSPILYRNLQVGEVTGYALVRD 554
Score = 37.6 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 29/337 (8%), Positives = 88/337 (26%), Gaps = 5/337 (1%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
+ + + G+ +G+I L LD+E N +A A I P +T + + +
Sbjct: 298 GAPIIYRGLEIGKISSLRLDKET-NKIVANAAIEPSMSDLLNTGSRLLLEEAELSLNGVK 356
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + + ++A + + S + ++ + + +
Sbjct: 357 NIGNLIRGNFLTLIPGEGEKARMFKAITQDQLQEQQPGTVSFALYANNSYGIERGSKLRH 416
Query: 175 PLTTTIANIETISTVLANNISHI----DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ I + + + + S+
Sbjct: 417 RGLDVGRVKKVSFEGNRVRFDVIVRPQYTSLVRSNSRFFIDGGIQASISAKGIDVSMPPA 476
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ I + + ++ + + ++ N D + + ++ +
Sbjct: 477 DQLISNGISFTSSGSKSIQNSYPLYENKRLSNLAADNQRGFAKYSLFADELPPVSEGSPI 536
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
++ + S + + + I + L+ K
Sbjct: 537 LYRNLQVGEVTGYALVRDGVTVSFKIENKYRHLITPSTVFWNRSGVEIEAGLDGVKVKAD 596
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN 387
+ + I A + + A + S+ N
Sbjct: 597 PISTLIKGGIAFDDIAGVTNKAGSKFKLYPSLSDAQN 633
>gi|146320089|ref|YP_001199800.1| hypothetical protein SSU98_0242 [Streptococcus suis 98HAH33]
gi|145690895|gb|ABP91400.1| Uncharacterized protein conserved in bacteria [Streptococcus suis
98HAH33]
Length = 600
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 18/54 (33%), Gaps = 5/54 (9%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
G FV+ + WL +++ SV LS V ++ +
Sbjct: 3 GKFVLVSTIILAVFMIWLGV-----SQKETMLVHYYPSVTTLSVSEDVTYSDVR 51
>gi|296179486|gb|ADG96491.1| MceE [Gordonia cholesterolivorans]
Length = 366
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 24/253 (9%), Positives = 70/253 (27%), Gaps = 4/253 (1%)
Query: 36 GPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
G V + + V L ++S V+++ + VG+I + + + + + + +
Sbjct: 41 GDPYRVTVHL-ADVQNLVSNSLVKYDNVTVGQIGSISVV---RSVAAVEVDLSEGVEIPS 96
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
+ T + + G Y+E + + + + +
Sbjct: 97 NATVKLAQTSVLGAQYLEFVRPERPAAGHLLPGDTIDVNSSSAYPSTESVLAALSLVLNG 156
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + ++ + T I + T++ D + S S
Sbjct: 157 SGLEQLRSIMTELNTATDGRTATANEAIGRLKTLVTRLNEQRDDIGRAIDALGRLSGSLA 216
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
N+ + + + + + K S + + D+ +
Sbjct: 217 DQNSTIAAGIDGLEPALTVLADQRENLTTMLGRVGTFGEKVSSVLSRSHDDLTAIVSELR 276
Query: 276 EVGQKIDHLLSDF 288
++ D
Sbjct: 277 PALNGLEQSGDDL 289
>gi|262404019|ref|ZP_06080574.1| methyl-accepting chemotaxis protein [Vibrio sp. RC586]
gi|262349051|gb|EEY98189.1| methyl-accepting chemotaxis protein [Vibrio sp. RC586]
Length = 467
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 72/244 (29%), Gaps = 8/244 (3%)
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ + + + + + F K +D+
Sbjct: 125 LLTMAAGVYYIMTFIGGAMFSLHKALETLEKGNLTYRMNYFPVRDEFSEIAITFDKVADR 184
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
VH ++E+ Q++ ++ L + S+ + + + +
Sbjct: 185 EQRLVHSIQESVALMQQISSDLN-LSAQSSATASESQQEHLNSLASATEQMASTIREVAG 243
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHT 378
D Q+ + + + + +L ++I + S A+ E ++ + T
Sbjct: 244 LAQDSSQQTEEAKRVAHSGQAKVTQTLTSVGKLANEIGSASHAVVELDTNAAKIDAVVTT 303
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERN 432
SE+ N + + G ++++ L + Q + +RN
Sbjct: 304 INAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQSATVEIQSMIEALQRN 363
Query: 433 PQDI 436
Q +
Sbjct: 364 SQSL 367
>gi|262165595|ref|ZP_06033332.1| methyl-accepting chemotaxis protein [Vibrio mimicus VM223]
gi|262025311|gb|EEY43979.1| methyl-accepting chemotaxis protein [Vibrio mimicus VM223]
Length = 467
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 26/244 (10%), Positives = 69/244 (28%), Gaps = 8/244 (3%)
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
++ + + + + F K + +
Sbjct: 125 LLVMAAGVYYIMTFIGGAMYSLHKALETLGKGDLTYRMNYFPVRDEFSEIAITFDKVAQR 184
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
VH ++E+ Q++ ++ L + S+ + + + +
Sbjct: 185 EQKLVHSIQESVALMQQISSDLN-LSAQSSASASENQQEHLNSLASATEQMASTIREVAG 243
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHT 378
D Q+ + + + + +L +I + S A+ E +S + T
Sbjct: 244 LAHDSSQQTEEAKRVANSGQAKVTQTLTSVGQLAREIGSASHAVTELDSNAAQIDAVVTT 303
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERN 432
SE+ N + + G ++++ L + Q + +RN
Sbjct: 304 INAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQSATVEIQSMIEALQRN 363
Query: 433 PQDI 436
Q +
Sbjct: 364 SQSL 367
>gi|16331062|ref|NP_441790.1| DNA repair protein RecN [Synechocystis sp. PCC 6803]
gi|11134607|sp|P74374|RECN_SYNY3 RecName: Full=DNA repair protein recN; AltName: Full=Recombination
protein N
gi|1653556|dbj|BAA18469.1| DNA repair protein; RecN [Synechocystis sp. PCC 6803]
Length = 584
Score = 39.1 bits (88), Expect = 1.4, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 57/163 (34%), Gaps = 6/163 (3%)
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ LL F + ++ A + T ++ + + ++ Q++ ++ +T
Sbjct: 144 QQRQLLDLFGGQNLLEKRQAVEITYKEFTQAKQALTARQQSEQNRLQRLDFLTYQLQELT 203
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
++ L+ + +S + E L A + ++ + I + LQ
Sbjct: 204 EAELTDGDEWELLIQEQEKLSHVVELQQLSYQATQLLYQSERDTPAIADLLGDAEGQLQT 263
Query: 400 FS------QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L +Q + ++ E +N E +P+ +
Sbjct: 264 MAEFDSSLNPLLELVQTALTQVIEAGRQVQRYGDNLEADPERL 306
>gi|126432882|ref|YP_001068573.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
gi|126232682|gb|ABN96082.1| virulence factor Mce family protein [Mycobacterium sp. JLS]
Length = 451
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 30/297 (10%), Positives = 78/297 (26%), Gaps = 10/297 (3%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M + V + L + ++ Q + S + VR
Sbjct: 1 MIGRTKSAKVLTVALVALLVAGAAVI----VRQEFFAPRTITAYFT-SATSIYPGDEVRV 55
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
G+ VG I + E + + + A I L Y++L+ +
Sbjct: 56 VGVRVGTIESIEPVGE---QARFTLAVDRGVSIPADAKAIIVAPNLIAARYVQLTPAYES 112
Query: 121 KKTIFQIATERN--QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + A+ A S + + I++ +
Sbjct: 113 SGPVLPDDAVIGVERTAIPVEWDEVKEQLARLASELGPSGGVSDTSVSRFIDSAANAMAG 172
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + L+ + + T +++ + A
Sbjct: 173 NGDKLRETISQLSGVGRILADGSGNIVDVIKNLQVFVTALRDSNVQIVQFQDRLATVSSV 232
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
V+ + + N ++ +V + R+ T + + ++D +++
Sbjct: 233 VDGSRAEMDSALTNLAEAVGEVQRFIAGSRDQTAEQIQRLANVTQNVADNRVALENV 289
>gi|83312800|ref|YP_423064.1| methyl-accepting chemotaxis protein [Magnetospirillum magneticum
AMB-1]
gi|82947641|dbj|BAE52505.1| Methyl-accepting chemotaxis protein [Magnetospirillum magneticum
AMB-1]
Length = 438
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 46/419 (10%), Positives = 123/419 (29%), Gaps = 21/419 (5%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
L +V ++ + +I L+ E+I+ + GL +S+R + VG+
Sbjct: 13 LLIVIVIALTVLAIISLTGGPLGGLQWMELILCLVLGGAGLLIGASLR---VRVGKTA-- 67
Query: 72 FLDQEYPNHSLAKALIRPDTPLYP-STTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
A A + + I + ++LS ++
Sbjct: 68 EFVDRATRVVAAAAQGDLNARITNIDRRHPIASLLSGINRVLDLSEAFAKEANTAMQYAN 127
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
+ + T F++ A ++ ++ + + + E+ + + S+ L
Sbjct: 128 QRKYFRTILTKGLRGDFVTFATTINRSLAMMETNEKAFVAFAEEKVRPVARAVGGASSAL 187
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
A+N S++ T + + ++++Q V +E S
Sbjct: 188 ADNASNLSAQASDTSQQAMTVAAAAE--------------QASVNVQAVASAVEEFSASI 233
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
+ ++ +T + + V Q + + + + A N+ +
Sbjct: 234 REITQQVNRAASTAQEASGKVEQTNSVVQTLGNAAQRIGDVVSLIQDIASQTNLLALNAT 293
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ ++ + + + + + Q + + A+ E
Sbjct: 294 IEAARAGEAGKGFAVVANEVKNLANQTARATEDITQQVSQIQDATKEAVQAMSEIGVTVA 353
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNF 429
+ E+ N I N+ + +G + + +Q + D
Sbjct: 354 QIEETSAAVAGAVEEQNAVTQEIARNVAEAA-TGTQSVSEAISLVQAAAKNALDGAAEV 411
>gi|145220612|ref|YP_001131290.1| hypothetical protein Mflv_0006 [Mycobacterium gilvum PYR-GCK]
gi|145213098|gb|ABP42502.1| Mammalian cell entry related domain protein [Mycobacterium gilvum
PYR-GCK]
Length = 413
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 11/85 (12%), Positives = 29/85 (34%), Gaps = 4/85 (4%)
Query: 35 DGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLY 94
+ +++ L + V+ G +G++ + ++ IR L
Sbjct: 39 GSGGYTLTAVFSNALN-LPAMAKVKLAGADIGQLESMQ---ARDYTAVTTLRIREGVLLP 94
Query: 95 PSTTATIRTQGLAGITYIELSTLRK 119
+TA +R+ G ++ +
Sbjct: 95 VGSTAELRSATPLGDVFVSIKPPPS 119
>gi|222055682|ref|YP_002538044.1| methyl-accepting chemotaxis sensory transducer [Geobacter sp.
FRC-32]
gi|221564971|gb|ACM20943.1| methyl-accepting chemotaxis sensory transducer [Geobacter sp.
FRC-32]
Length = 662
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 18/180 (10%), Positives = 56/180 (31%), Gaps = 6/180 (3%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
++ + E +++ ++D S + + D+ +
Sbjct: 282 LKNRAENTADGARRQTEQATQIATAAEEMSLTIADISQTSANASDISG-----DALQTAQ 336
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ E + +++ + + ++ LN + + ++ I++I+ +L
Sbjct: 337 QGKTVAAEAVEAIDRVLISNKELAHMVGELNSQVTEISGVVEVISDIADQTNLLALNAAI 396
Query: 373 QRA-MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ A + + ++ ++ I + + Q T N D ER
Sbjct: 397 EAARAGEQGRGFAVVADEVRALAERTIKATREIGTKITKVQDESQRTANSMDTASTEVER 456
>gi|84494807|ref|ZP_00993926.1| putative mce-related protein [Janibacter sp. HTCC2649]
gi|84384300|gb|EAQ00180.1| putative mce-related protein [Janibacter sp. HTCC2649]
Length = 436
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 14/80 (17%), Positives = 29/80 (36%), Gaps = 5/80 (6%)
Query: 34 YDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP- 92
+ EV +R L S V+ G+ VG + + + + ++P+
Sbjct: 37 VFTDVVEVTLRTDRIGSQLQEASDVKIRGLIVGEVRSIEAGVDG---ATLHLALKPEMVS 93
Query: 93 -LYPSTTATIRTQGLAGITY 111
+ +A + + L G Y
Sbjct: 94 LIPAKVSARLLPKTLFGERY 113
>gi|254787724|ref|YP_003075153.1| methyl-accepting chemotaxis protein [Teredinibacter turnerae T7901]
gi|237683636|gb|ACR10900.1| methyl-accepting chemotaxis protein [Teredinibacter turnerae T7901]
Length = 745
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 34/416 (8%), Positives = 97/416 (23%), Gaps = 49/416 (11%)
Query: 64 PVGRIV--GLFLDQEYPNHSLAKALIRPD------------------------------- 90
VGR+ + + +
Sbjct: 327 QVGRVDTEAVTAAARGESGVKVIIDYNNNPVLSAYAPLSFAGLDWSILAEIDEAEIMADI 386
Query: 91 -------TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSG 143
+ I + + ++ + +
Sbjct: 387 ERLRLVIAIVLALAMVPITVIAWLMARSVIRPLGAEPEQMASITSQIAEGDLTMDLAVDH 446
Query: 144 INYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHT 203
+ + + ++ I L H+++
Sbjct: 447 QSGAFRSIAVMATRLKQIVNSIASAAHQQASAAEELSLITTQSGEKLNVQQKHVEQAAAA 506
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
S ++ + ++V + +Q S+ ++ +V
Sbjct: 507 INEMSASVADVARTTASAANASNEASVKLKDGSERVVDVAGEVQQVSSILAQAWQKVEEL 566
Query: 264 VHDVRETTQTFQEVGQKIDHLL-SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + D ++ +++ A +RS ++ T
Sbjct: 567 KAQSDNIASILESIRGIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQNTQKST 626
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSK--INNISALKENNSLFKDAQRAMHTFR 380
++I + + ++ SS E +++ + S L E S M
Sbjct: 627 GDISQMIHALQQGTSDACDVMRSSVDRMETVAERALATSSNLDEAVSSVGRIDDMMARIA 686
Query: 381 DTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+E+ +R + I N++ + S I +L + + + +F+
Sbjct: 687 SAAEQQSRVVEDINVQITGINSMSSDSSEAAFQITAASEELAKLATNLQSLVGHFK 742
>gi|4249695|gb|AAD13769.1| myosin heavy chain [Rana catesbeiana]
Length = 879
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 68/189 (35%), Gaps = 10/189 (5%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + +D +F ++ + E A+ S +
Sbjct: 353 SLEKTKQRLQAEVEDLMVDVERSNSAAAALDKKQRNFDKV-LAEWKQKYEEAQAELESAL 411
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S EI + +++ +E + + Q+ ++L +I E +
Sbjct: 412 KDARSMSTEIFKMKNAYEESLDQLETLKRENKNLQQEISDLTEQI------SETGKTVHE 465
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNN 428
++A + + +L++ L ++ L ++ + D+ +
Sbjct: 466 LEKAKKLVEQEKSDLQAALEEAEGSLEHEESKILRIQLELNQLKSEVDRKIAEKDEEIEQ 525
Query: 429 FERNPQDIV 437
+RN Q I+
Sbjct: 526 LKRNSQRII 534
>gi|284043446|ref|YP_003393786.1| chromosome segregation ATPase-like protein [Conexibacter woesei DSM
14684]
gi|283947667|gb|ADB50411.1| Chromosome segregation ATPase-like protein [Conexibacter woesei DSM
14684]
Length = 1514
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 19/172 (11%), Positives = 49/172 (28%), Gaps = 5/172 (2%)
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ +V + E L + + + +
Sbjct: 1085 AERADDVADNARKVADSDERISGEAELLRELRGGRERLAVAPEHARPVGADASASAATGA 1144
Query: 331 TINTIENITSNLNDSSQKFAELMSKI-NNISALKENNSLFKDAQRAM----HTFRDTSEK 385
+ + ++L +++ + ++ + + A+ E A++A+
Sbjct: 1145 ARDASASAPADLPPWTRRVDRVYEQVADAVRAVDEAARTHTAARQALHERVQAIARVVAA 1204
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ IPS + + L +L+ D + ER+ Q IV
Sbjct: 1205 ADERIPSGITAPLRGGDALAPEAARLEGELRTRAGELDRTIGELERHRQAIV 1256
>gi|145520535|ref|XP_001446123.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413600|emb|CAK78726.1| unnamed protein product [Paramecium tetraurelia]
Length = 1438
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 34/367 (9%), Positives = 87/367 (23%), Gaps = 26/367 (7%)
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG+ + + + ++ + +T YI+ + ++ +K
Sbjct: 479 VGKQEDIVFNPVREQLFRIFESVVTNSVIRITTRHREMLSMPELQQYIQDESNQQSEKVD 538
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ ++ I I+ +
Sbjct: 539 VKAIINGSENFQILCGQMRKELEIAFDYLEQYAEKLKPFMKWYVENTGVNIEKQFADKEV 598
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
N D+ + T + I S + + + +
Sbjct: 599 EEYRNAINQYKDQDQQFQDIEPTQEIGMILFDNQKLKAKIKSSAMNCIQELQKFIPEYIY 658
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
V I E + E I++ D S+ + A L +
Sbjct: 659 KKAVIFTQKTAQLYSTIAISPITVEQFVNYMEAVNVINNQFEDLSNVSQEVTAMALLMD- 717
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
+ + ++ +K + M+ +
Sbjct: 718 -----------------ELRIKIQDKHKQKFAECNQQVSQLRKKVDDAMANYDQ-----N 755
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
N KD +R + T + +N + + + L+D+ V+ +++ V+
Sbjct: 756 LNKFRKDMERMIPQVDSTVKDLNERVS---EQPLSSLAADLSDMVTFVQGVRKQVDELKV 812
Query: 425 CLNNFER 431
Sbjct: 813 HAKKLND 819
>gi|326436740|gb|EGD82310.1| hypothetical protein PTSG_11945 [Salpingoeca sp. ATCC 50818]
Length = 573
Score = 39.1 bits (88), Expect = 1.5, Method: Composition-based stats.
Identities = 15/203 (7%), Positives = 68/203 (33%), Gaps = 3/203 (1%)
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
+ +Q+ V + + ++ + + + + +++ +++
Sbjct: 260 EKMHRVEEQLKTEVRESQTQAHVLRQQINQQETTIHELKREVEDLRREVLETGELKNSAV 319
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ ++ + + ++S + ++ ++ + ++ + +L
Sbjct: 320 EETRAVLREVTKERDEARQLYERVSKELSSRVAETKSLQQKVELEERVLAEERNQTALRD 379
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN---LVRKLQETVNHFDDCLN 427
+ + + R + + + + +S L + +R L+E ++ +
Sbjct: 380 RHIQELQAKEAEFVRSERQLRAALTDADDVRESLLRKLSAQATTIRDLREAIDALSEQNQ 439
Query: 428 NFERNPQDIVWGREKGSVKIYKP 450
+ Q + GR+ S+ + P
Sbjct: 440 TLVSHNQLLRSGRDTASLPDFTP 462
>gi|269968787|ref|ZP_06182776.1| Methyl-accepting chemotaxis protein [Vibrio alginolyticus 40B]
gi|269826599|gb|EEZ80944.1| Methyl-accepting chemotaxis protein [Vibrio alginolyticus 40B]
Length = 489
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 23/259 (8%), Positives = 77/259 (29%), Gaps = 22/259 (8%)
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ I + ++ + + + + + +
Sbjct: 153 GVYYIMTFIGGAMFTMNKALNTLAGGDLTARMNFFPVRDEFSEIAITIDKVAEREQQMVL 212
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + +Q S++ +S + +E + +++ + + ++ T
Sbjct: 213 SIQESVALMQQISSDLNQSIHHSSDISATQQEHLNSLASATEQMASTIREVATLAHDSST 272
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
D+ + +S + + + I + + L+ ++ + E+++ IN
Sbjct: 273 Q-----TDDARNVAQSGQVKVENTLHSISNLSNEIQSASQAVAELDANAAQIDEVVTTIN 327
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
IS +L + A G ++++ L + Q+
Sbjct: 328 GISEQTNLLALNAAIEAA-------------RAGEQGRGFA----VVADEVRALAGRTQQ 370
Query: 418 TVNHFDDCLNNFERNPQDI 436
+ + +RN Q +
Sbjct: 371 ATVEIQTMIESLQRNSQSL 389
>gi|283853621|ref|ZP_06370856.1| methyl-accepting chemotaxis sensory transducer [Desulfovibrio sp.
FW1012B]
gi|283570983|gb|EFC19008.1| methyl-accepting chemotaxis sensory transducer [Desulfovibrio sp.
FW1012B]
Length = 777
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 36/467 (7%), Positives = 110/467 (23%), Gaps = 54/467 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGI 63
+N VGLFV+ + + + V G + R +G
Sbjct: 282 RNILIGVGLFVLVAVAVLITIFNRVMVLAPLAAIR-----QFTEKVAGGDLGA--RLSGR 334
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ-GLAGITYIELSTLRKEKK 122
L N ++ I T G+ L R
Sbjct: 335 F-----RFELAGLAKNLERMVGELKTKLGFAEGVMNGIPTPCGIVAPDCTMLWANRHICD 389
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP------- 175
+ + A + + + + + + + + + + K
Sbjct: 390 LLEKTAPPETFKGQKSGLFYLGDASRETCSDRALRETQALTMQNEYVTPSGKTLYISVIS 449
Query: 176 -----LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ T+ + T + ++ + ++D + + +
Sbjct: 450 TPFFDMDGTLLGSISFWTDQTEIHAQQARIAAQNALMAETADKASLTSDRMASASQQLSA 509
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ +Q + + + ++ + +T + QK +
Sbjct: 510 QIEQANNGAQEQNGRVQETVTAVEEMNATILEVARNAGDTATGAEAARQKAREGADMVTE 569
Query: 291 KMKSKETSAFLEN--------------------------IADSTSNMRSSISAIREITDQ 324
+ + T + ++ +
Sbjct: 570 VVAAVGTVRDAAAALKDKMRGLGQQAHGIGAVLGVISDIADQTNLLALNAAIEAARAGEA 629
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ + + + ++++ E ++ I + + A A+ +E
Sbjct: 630 GRGFAVVADEVRKLAEKTMHATKEVGEAIAGIQQ--GTTDTERMVDRAAAAVDQATTLAE 687
Query: 385 KINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ + I + + + + I + T + + R
Sbjct: 688 RSGAALSEIVSVV-EIAGDQVRAIATAAEQQSATSEEINRAVEAISR 733
>gi|238024348|ref|YP_002908580.1| methyl-accepting chemotaxis sensory transducer [Burkholderia glumae
BGR1]
gi|237879013|gb|ACR31345.1| Methyl-accepting chemotaxis sensory transducer [Burkholderia glumae
BGR1]
Length = 597
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 27/395 (6%), Positives = 100/395 (25%), Gaps = 29/395 (7%)
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
VG + + L+ + +R + + + +
Sbjct: 172 VGNVKSIHPTPSSFG-----MLVDRSGRIIAHPDPKLRLKPVTDVAADFM---------- 216
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ TA + + I + E+ ++ +
Sbjct: 217 ---SVITGSAGPGTAPMKIVVDGRTKLVRAQSVPGTDWDVIVALDESEATAGMRSLLSAS 273
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
++ ++ ++ + T + I L + ++ +V I
Sbjct: 274 VVALLVIVGVASVIGTAITATAFRRLGNVCQAMAKIGAGTGDLTQRLRDEGRDEVANIAR 333
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS--KMKSKETSAFLE 302
+ ++ V + + ++ + +
Sbjct: 334 SFNQFVAKLQGVMLEIRGASESVGAAANEIASASRDLSTRTESAAASLQQTAASMDQISG 393
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ S + + T + ++ S + +S + ++ I+ I+
Sbjct: 394 TVDQSAAAATEADERSNLATQIASRGGEIVSDAVGTMSEIEHASSQIGTIIRVIDGIAFQ 453
Query: 363 KENNSLFKDAQRA--------MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
+L + A + + ++ ++ ++ + +
Sbjct: 454 TNILALNAAVEAARAGEQGRGFAVVAHEVRTLAQRSAQAAREVKQLVEATVSRVAAGSSQ 513
Query: 415 LQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
++ + ++N +N Q I+ + S + +
Sbjct: 514 VRRAGETMSEIVSN-SQNVQSIISSIARASTEQTR 547
>gi|60360226|dbj|BAD90357.1| mKIAA4046 protein [Mus musculus]
Length = 1319
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 45/388 (11%), Positives = 104/388 (26%), Gaps = 12/388 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L V G G + E + D PL + A T+
Sbjct: 215 LKVGDRVLVGGTKAGVV---RFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPK 271
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L + I +T + S + S S + + +
Sbjct: 272 YGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMAATPASLKRSPSASSLSSMSSVASSVSS 331
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ ++ + + + Q ++ TS I
Sbjct: 332 KPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEI 391
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + +++ + V + E +E +K++ L +
Sbjct: 392 EQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEE 451
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+K S A+R + + Q+ +
Sbjct: 452 SITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMSLSLLQEISA 511
Query: 352 LMSKINNI--------SALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
L K+ I ++LKE+ ++A Q+ + +EK+++ S+ + L + ++
Sbjct: 512 LQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANK 571
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ I KL+ + + +
Sbjct: 572 ENSDVIALWKSKLETAIASHQQAMEELK 599
>gi|330831649|ref|YP_004394601.1| methyl-accepting chemotaxis sensory transducer [Aeromonas veronii
B565]
gi|328806785|gb|AEB51984.1| Methyl-accepting chemotaxis sensory transducer [Aeromonas veronii
B565]
Length = 754
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 57/421 (13%), Positives = 128/421 (30%), Gaps = 28/421 (6%)
Query: 49 VDGLSTDS---------SVRFNGIPVGRIV-GLFLDQEYPNHSL---AKALIRPDTPLYP 95
V GL V FNG PVG + G LD++ L + I
Sbjct: 148 VGGLEIGVAGTGLRGVVPVTFNGQPVGSVEFGRALDEKLFGQLLDKQVQLAIYLFEQGKL 207
Query: 96 STTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS 155
T G Y + + + Q ++ A SG I
Sbjct: 208 VTLVGTSRLGEVMEWYQPVLAGEERFVNMTQQGSDLLVMAAPLRDYSGKAVGIIEL-TRD 266
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + Q I + + + + N +D + + S D +
Sbjct: 267 HSLVAADLARQGWQMAIISLVGALVIAMVMAFALNRINRPLLDSVKALEALANGSGDLGS 326
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ K+ + + + S+++ + + Q
Sbjct: 327 KLPVAGPEEIRRLGSAFNGFVAKIRDTISQLTATLGELAGESERLSRSAAGNLGSMTRQQ 386
Query: 276 EVGQKIDHLLSDFSSKMKSK--ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
E ++ +++ +S + T+ E ++ + + +++ + +++ I
Sbjct: 387 EQTTQLATAMTEMTSTVHEVANNTAQAAEAANEADNQAVTGDEVVQQSVNMIEQLAEEIA 446
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ N + +S++ +++ I +I+ +L + A + +
Sbjct: 447 SAGNTVKEVAKASEQIGSVLAVIQSIAEQTNLLALNAAIEAARA---GEQGRGFAVVADE 503
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETV--------NHFDDCLNNFER-NPQDIVWGREKGS 444
+L +Q +I+ + +LQ V + + ER N GR KG+
Sbjct: 504 VRSLAGRTQHSTAEIRGTIEQLQRAVGTTVTMIEHSVSRAGESVERANQAGEALGRIKGA 563
Query: 445 V 445
V
Sbjct: 564 V 564
>gi|296113227|ref|YP_003627165.1| protein translocase subunit YajC [Moraxella catarrhalis RH4]
gi|295920921|gb|ADG61272.1| protein translocase subunit YajC [Moraxella catarrhalis RH4]
gi|326560221|gb|EGE10609.1| protein translocase subunit YajC [Moraxella catarrhalis 7169]
gi|326562865|gb|EGE13152.1| protein translocase subunit YajC [Moraxella catarrhalis 46P47B1]
gi|326563693|gb|EGE13945.1| protein translocase subunit YajC [Moraxella catarrhalis 103P14B1]
gi|326565228|gb|EGE15413.1| protein translocase subunit YajC [Moraxella catarrhalis 12P80B1]
gi|326570269|gb|EGE20314.1| protein translocase subunit YajC [Moraxella catarrhalis BC8]
gi|326573303|gb|EGE23271.1| protein translocase subunit YajC [Moraxella catarrhalis 101P30B1]
gi|326575800|gb|EGE25723.1| protein translocase subunit YajC [Moraxella catarrhalis CO72]
gi|326576880|gb|EGE26786.1| protein translocase subunit YajC [Moraxella catarrhalis O35E]
Length = 111
Score = 39.1 bits (88), Expect = 1.6, Method: Composition-based stats.
Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 9/90 (10%)
Query: 16 SILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQ 75
++ +FF+I++ + VDGL+ + V F G +GRI + D
Sbjct: 26 LLIPVAFFAIFYFLIIRPQSKRNKQHKAM----VDGLTVGNEVVFAGGLIGRIKKVEGD- 80
Query: 76 EYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
+++ + + ++ + G
Sbjct: 81 ----YAVITLNHSTEVKIQRASVVMVLPTG 106
>gi|54309112|ref|YP_130132.1| paraquat-inducible protein B [Photobacterium profundum SS9]
gi|46913544|emb|CAG20330.1| hypothetical paraquat-inducible protein B [Photobacterium profundum
SS9]
Length = 875
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 29/357 (8%), Positives = 87/357 (24%), Gaps = 10/357 (2%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
+ + + G+ +G+I L LD+E N +A A I P +T + + +
Sbjct: 298 GAPIIYRGLEIGQISSLRLDKET-NKIIANAAIEPSMSDLLNTGSRLLLEEAEVSLNGVK 356
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + + ++ + + S + ++ K +
Sbjct: 357 NIGNLIRGNFLTLIPGEGEKVRMFKAITQDQLQEQQPGTVSFALYANNSFGIKRGSKLRH 416
Query: 175 PLTTTIANIETISTVLANNISHI----DKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+ + I + + + + S+
Sbjct: 417 RGLDVGRVKKVSFEGNSVRFDVIVRPQYTSLVRSNSRFFIDGGIQASISAKGIDVSMPPA 476
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ I + + N + + ++ D + + ++ +
Sbjct: 477 DQLISNGISFTSSGSKNIQKNYPLYENKRLSTLAADNQRGFAKYSLFADELPPVSEGSPI 536
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
++ + S + + + I + + K
Sbjct: 537 LYRNLQVGEVTGYALVRDGVTVSFKIENKYRHLISPSTVFWNRSGVEIEAGFDGIKVKAD 596
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKIN-----RYIPSIGNNLQNFSQ 402
+ + I A + + A + S+ N ++ S
Sbjct: 597 PISTLIIGGIAFDDIVGVTNKAGSKFKLYPSLSDAQNFGLLVTLTAPNARSVSKNSD 653
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 12/120 (10%), Positives = 30/120 (25%), Gaps = 3/120 (2%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP--LYPSTTAT 100
I +S + + + I VG+++ + L + + L K I + + T
Sbjct: 748 ILESEDRGSVSEGTPLLYRDIQVGQVIEVAL-GDLSDRVLIKIQIEKEYSHLIRTDTVFW 806
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ I ++ + +P +
Sbjct: 807 NASGVDFTIGLTGAKIQTGTVDSLLRGGISFATPEEQPLSPLAKQEEHFLLHKEADDKWR 866
Score = 38.4 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 25/87 (28%), Gaps = 1/87 (1%)
Query: 43 IRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIR 102
+ G+ S +R G+ VGR+ + + + + + ++ I
Sbjct: 399 ALYANNSFGIKRGSKLRHRGLDVGRVKKVSFEGNSVRF-DVIVRPQYTSLVRSNSRFFID 457
Query: 103 TQGLAGITYIELSTLRKEKKTIFQIAT 129
A I+ + +
Sbjct: 458 GGIQASISAKGIDVSMPPADQLISNGI 484
>gi|303326980|ref|ZP_07357422.1| methyl-accepting chemotaxis protein [Desulfovibrio sp. 3_1_syn3]
gi|302862968|gb|EFL85900.1| methyl-accepting chemotaxis protein [Desulfovibrio sp. 3_1_syn3]
Length = 675
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 44/385 (11%), Positives = 115/385 (29%), Gaps = 15/385 (3%)
Query: 51 GLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALI---RPDTPLYPSTTATIRTQGLA 107
GL + VR +I LD A + L + A ++ Q
Sbjct: 301 GLRVSAPVR-------KITRYVLDVAGGKK-DAALDVHSRDDMGELADALRAMVKKQDNL 352
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ E + ++K A E + A A + + IS A + + I
Sbjct: 353 MLEAGEKAEEARKKAEEAAGAMEEARLAQQQAEQAKRDGMISAAGQIEGVVEKLNEAINN 412
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT-ITDLITS 226
I +E+ ++ ++ + ++D + TD
Sbjct: 413 IAVQVEQSDEALSHAASRLAETATAMEEMNSAVLEVAKNAGLAADVSTSARQKATDGTAV 472
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
+ + + I + + + + + I +V + I+ +
Sbjct: 473 VTQSVAGIQEVQSQSLALREDMVRLDEHARAISQIMSVISDIADQTNLLALNAAIEAARA 532
Query: 287 DFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
+ + + + + ++ +AI+ I + ++ + + + S
Sbjct: 533 GDAGRGFAVVADEVRKLAEKTMTSTTEVGNAIKAIQESAEQSAHQVEQAVQNIAKATEFS 592
Query: 347 QKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN 406
K E +++I + ++ + A TSE+I + I + + + + +
Sbjct: 593 NKSGESLNEI--LEMVEHTADDVRTIATASEEQSATSEEITKSITEVNE-ITSTTSEAMR 649
Query: 407 DIQNLVRKLQETVNHFDDCLNNFER 431
+ + L+ + +
Sbjct: 650 EAAKGLESLRRRSRELVSLIEQMKN 674
>gi|296273570|ref|YP_003656201.1| Cache sensor domaining-containing methyl-accepting chemotaxis
sensory transducer [Arcobacter nitrofigilis DSM 7299]
gi|296097744|gb|ADG93694.1| methyl-accepting chemotaxis sensory transducer with Cache sensor
[Arcobacter nitrofigilis DSM 7299]
Length = 754
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 41/407 (10%), Positives = 107/407 (26%), Gaps = 35/407 (8%)
Query: 57 SVRFNGIPVGRI-VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
V +NG +G + V + L + D ++ + A++ TQ + Y +L
Sbjct: 194 PVYYNGEFIGTVGVDIALKKMSERV--------RDLKIFKNGYASLITQAGTIVGYPDLK 245
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGIN---YFISNAENTSKKISDSSRHIQKIIENI 172
L K I + + + + + + I I
Sbjct: 246 FLSKNINEISKNKFFLDLPKKLHENKKLVYKGIDERNGLMSEFVVIPFQIEKTGVYWGLI 305
Query: 173 EKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIK 232
+ I ++ + ++ IT+ +TS +
Sbjct: 306 LSVPIEEYLENTIYIKWFSIISGIISFILIGIVIAFNTRLLDRNLKNITNGLTSFFSYLN 365
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL-SDFSSK 291
+ + + ++ + + E EV ++H+
Sbjct: 366 KETSSTEQIKINSNDEFGVMSKQINENISAIKIKLDEDIALIDEVKDVVEHVKEGRIKQT 425
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ L + + M +S + + + + + K +
Sbjct: 426 ITKNSKDESLNELKVIINEMLEILSVNISDDLNKILDALNSYQNLDFRHRIQNDTGKVEK 485
Query: 352 LMSKINNISA--------------------LKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
++ NI L+ N L ++ + + +T+ +
Sbjct: 486 GLNNFANIINEMLVENKKTGLVLAKSSKVLLENVNLLNTNSNISAASLEETAASLEEITS 545
Query: 392 SIGNNLQNFSQSG--LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+I N +N + ++ + + +N + I
Sbjct: 546 NITQNTRNVIKMADYAKELTTSANEGKSLAEETVTSMNEIDNQVSAI 592
>gi|256617068|ref|ZP_05473914.1| chromosome segregation ATPase [Enterococcus faecalis ATCC 4200]
gi|257088369|ref|ZP_05582730.1| chromosome segregation ATPase [Enterococcus faecalis D6]
gi|256596595|gb|EEU15771.1| chromosome segregation ATPase [Enterococcus faecalis ATCC 4200]
gi|256996399|gb|EEU83701.1| chromosome segregation ATPase [Enterococcus faecalis D6]
Length = 548
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 17/154 (11%), Positives = 56/154 (36%), Gaps = 7/154 (4%)
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
D+ + + +A Q + + + + ++ + ++ + N+ +
Sbjct: 144 RDTYDHSKPLKAAKNSPDKQGIESLLMLFGKYDGVNDQKEILKEAENRKNAFNSAQKYEY 203
Query: 365 NNSLFKDA-----QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
S+ D+ Q+ + + ++++ +L + L D++ + +
Sbjct: 204 IASVSTDSAYKKNQKRIAQLDEELKELSDESTKGLGDLSSIQAQQLADLRRQLSNARRQR 263
Query: 420 NHFDDCLNNFE--RNPQDIVWGREKGSVKIYKPK 451
NFE RNP + ++ +++ + P+
Sbjct: 264 TKLLAQKKNFEAERNPSRQQFEKDFENLQQFFPE 297
>gi|145629238|ref|ZP_01785037.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
22.1-21]
gi|144978741|gb|EDJ88464.1| paraquat-inducible protein B-like protein [Haemophilus influenzae
22.1-21]
Length = 279
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 13/107 (12%), Positives = 33/107 (30%), Gaps = 12/107 (11%)
Query: 4 KNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNG 62
+ + F+ + F + I + G+ D + +R+ G
Sbjct: 26 RISPFWLLPFIALCIGAILFF-------QIVKERGTSITITF-ANGSGIVADKTQIRYQG 77
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDT--PLYPSTTATIRTQGLA 107
+ +G + + + A I P+ L +T + ++
Sbjct: 78 LQIGIVKEVHFT-DNLQKVEVVANINPEASSILRENTKFWLVQPNVS 123
>gi|146180829|ref|XP_001021558.2| hypothetical protein TTHERM_00149230 [Tetrahymena thermophila]
gi|146144369|gb|EAS01313.2| hypothetical protein TTHERM_00149230 [Tetrahymena thermophila
SB210]
Length = 570
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 29/338 (8%), Positives = 91/338 (26%), Gaps = 7/338 (2%)
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+ + ++ Q+ +R + I +++ Q+
Sbjct: 147 MYQHIKLQNQRKADQLDEIFLERKRQEEEIQKLEMRIHEINQQAEQKITELDPEQRQEYE 206
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ N + I+ + + + + +
Sbjct: 207 NLLQENRQLNNDINLQRNELEEINIKLQQTESRLNIDSQKLKGKYLKEQIIELERKREDL 266
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + E + + + T +E + ++I + ++ +
Sbjct: 267 ELQLNEANLSFPEARDKLKARVAEDNALLAQTEKRTKEIQKNIDNYEKRIREINAELNGG 326
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQR----QKIISTINTIENITSNLNDSSQ 347
+ + E I M I ++ ++ I I T+ +S + +
Sbjct: 327 AEREAQKQKYEIIYQKDKEMNDFIQNYQQFREREIEQINSIEQNIITLLENSSKILSLTG 386
Query: 348 KFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
I K + ++++ + E + + + + +Q
Sbjct: 387 NLPSQADYTQIIGNFKFQEGMKENSENTLVMIEKQVETLKESLKQLETLEEKLAQKKEKQ 446
Query: 408 IQNLVR---KLQETVNHFDDCLNNFERNPQDIVWGREK 442
++ L + + N D FE+ + ++ RE+
Sbjct: 447 VKLLEQWNTDIDTKYNRIDQFKREFEQKEKRLLKDREE 484
>gi|148687680|gb|EDL19627.1| restin (Reed-Steinberg cell-expressed intermediate
filament-associated protein) [Mus musculus]
Length = 1391
Score = 38.8 bits (87), Expect = 1.7, Method: Composition-based stats.
Identities = 45/388 (11%), Positives = 104/388 (26%), Gaps = 12/388 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L V G G + E + D PL + A T+
Sbjct: 211 LKVGDRVLVGGTKAGVV---RFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPK 267
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L + I +T + S + S S + + +
Sbjct: 268 YGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMAATPASLKRSPSASSLSSMSSVASSVSS 327
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ ++ + + + Q ++ TS I
Sbjct: 328 KPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEI 387
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + +++ + V + E +E +K++ L +
Sbjct: 388 EQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEE 447
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+K S A+R + + Q+ +
Sbjct: 448 SITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMSLSLLQEISA 507
Query: 352 LMSKINNI--------SALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
L K+ I ++LKE+ ++A Q+ + +EK+++ S+ + L + ++
Sbjct: 508 LQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANK 567
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ I KL+ + + +
Sbjct: 568 ENSDVIALWKSKLETAIASHQQAMEELK 595
>gi|806511|dbj|BAA09067.1| myosin heavy chain [Cyprinus carpio]
Length = 1196
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 26/201 (12%), Positives = 72/201 (35%), Gaps = 5/201 (2%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q L++ + S + T ++ + G++ + L ++ K ++ +
Sbjct: 657 QRLQDAEESIEAVNSKCASLEKTKQRLQSEVEDLMIDGERANALAANLDKKQRNFDKVLA 716
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ +A +E ++ N+ E +L ++ L +I+++S
Sbjct: 717 DWK-QKYEESQAELEAAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLS 775
Query: 361 -ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQ 416
L E + ++A T +I + L++ L ++ + ++
Sbjct: 776 EQLGETGKSIHEIEKAKKTVESEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEID 835
Query: 417 ETVNHFDDCLNNFERNPQDIV 437
+ D+ + +RN Q ++
Sbjct: 836 RKLAEKDEEMEQIKRNSQRVL 856
>gi|56790034|dbj|BAD82813.1| myosin heavy chain [Cyprinus carpio]
Length = 1931
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 26/200 (13%), Positives = 72/200 (36%), Gaps = 5/200 (2%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
Q L++ + S + T ++ + G++ + L ++ K ++ +
Sbjct: 1393 QRLQDAEESIEAVSSKCASLEKTKQRLQGEVEDLMIDGERANALAANLDKKQRNFDKVLA 1452
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
S+ +A +E ++ N+ E +L ++ L +I+++S
Sbjct: 1453 EWKQKYEESHA-ELEAAQKEARSLSTELFKMKNSYEEALDHLETLKRENKNLQQEISDLS 1511
Query: 361 -ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQ 416
L E + ++A +I + + L++ L ++ + ++
Sbjct: 1512 EQLGETGKSIHELEKAKKIVESEKAEIQTALEEAESTLEHEESKILRVQLELNQVKSEID 1571
Query: 417 ETVNHFDDCLNNFERNPQDI 436
+ D+ + +RN Q +
Sbjct: 1572 RKLAEKDEEIEQIKRNSQRV 1591
>gi|78063204|ref|YP_373112.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp.
383]
gi|77971089|gb|ABB12468.1| methyl-accepting chemotaxis sensory transducer [Burkholderia sp.
383]
Length = 620
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 52/410 (12%), Positives = 127/410 (30%), Gaps = 17/410 (4%)
Query: 27 WLSRSNQYDGPMAEVIIRIPGSVDG--LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAK 84
WL+ G +V + +V G + +S V +G+P+G + L + +A
Sbjct: 138 WLTGF-LSSGKAFDVNMDREVTVGGYMMFINSRVELDGVPIGA-ACMSLSVDALAKGIA- 194
Query: 85 ALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGI 144
+ + A + + I + L K + +
Sbjct: 195 -----AYRIGETGFAYLV-RPDGAIMMHRDTALIDGKHFMKDQQGLPGDASSTLLAGQPY 248
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
Y N + ++ I+ S +E P + + A + + +
Sbjct: 249 AYLSYNGDGGARFIATSFIPELNAYVVVEVPQAELLGPVTRAIRSAALVAAVVGLGVALL 308
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
+ L++ + + + + + I S+ F + + V
Sbjct: 309 VIWLVGRAIAAPIRRAATLLSEIASGQGDLTRRMTVESEDEIGQLSDAFNRFVSSLSTLV 368
Query: 265 HDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
H +R + + +I +D ++ +S ++ + T+ +R++
Sbjct: 369 HSIRAASSSIATGSAQIATGNADLSERTEGQSSNLERTASSMEEITAVVRNNTETATTAA 428
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA---QRAMHTF 379
T + + + Q+ ++ +I+ I + ++ S + A+
Sbjct: 429 KMINGASDTAARGGQVVGEVVTTMQEISDASQRISEIIVMIDSISFQTNILALNAAVEAA 488
Query: 380 RD-TSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
R + + S NL S +I+ L+ TVN ++
Sbjct: 489 RAGEQGRGFAVVASEVRNLAQRSAQAAKEIKVLIEHSAGTVNTGSRLVSE 538
>gi|294677661|ref|YP_003578276.1| methyl-accepting chemotaxis protein [Rhodobacter capsulatus SB
1003]
gi|294476481|gb|ADE85869.1| methyl-accepting chemotaxis protein [Rhodobacter capsulatus SB
1003]
Length = 935
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 60/435 (13%), Positives = 138/435 (31%), Gaps = 18/435 (4%)
Query: 8 TSVGLFVVSILFF-SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
GL + L + + + A + G+VDGL + G
Sbjct: 462 ALAGLSAIFGLLAPLLAWLGIVRPLQRVTQATARLAAGDTGAVDGLRPGA---------G 512
Query: 67 RIVGL--FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
I L L + +R D + A R A + E R ++
Sbjct: 513 EIGALAGALTVFRDALNDRTRRMREDMDRAEAAAAAERAAQQAALAAAEAERDRDRQEQA 572
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
Q A ER +R + + + + + T A E
Sbjct: 573 RQEA-ERQERRRLRDAAEAERAAQLQEQQLVVSRLAEALRAMSAGDLTARIETAFPAAYE 631
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + ++ + +++ S S+ +A L++ +
Sbjct: 632 GLRSDFNQAVTRMAELLSEIVRASGSVQSEAHQLGAASGELGRRTETQAASLEETAAAMN 691
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLE 302
+ S ++ + + V RETT +EV ++ ++D SS+ S+ TS +
Sbjct: 692 QMAASVAQALQGAREAARAVGQTRETTAAGREVVRRTLQAMTDIAQSSEQISRITSVIDD 751
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ ++ + + + + + ++++++ A L++ ++ +
Sbjct: 752 IAFQTNLLALNAGVEAARAGEAGRGFAVVASEVRGLAQRSSEAAREIAGLIAT--SVRQV 809
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
E L + A+ D +++ + +I S G+++I V +L + H
Sbjct: 810 GEGVELASGSDAALGRIEDLVSRLDALLAAIETGAGEQSA-GISEITAAVNQLDQVTQHN 868
Query: 423 DDCLNNFERNPQDIV 437
Q ++
Sbjct: 869 AAMFEENAAATQALL 883
>gi|3128262|gb|AAC16114.1| methyl-accepting chemoreceptor [Rhodobacter capsulatus SB 1003]
Length = 881
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 60/435 (13%), Positives = 138/435 (31%), Gaps = 18/435 (4%)
Query: 8 TSVGLFVVSILFF-SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
GL + L + + + A + G+VDGL + G
Sbjct: 408 ALAGLSAIFGLLAPLLAWLGIVRPLQRVTQATARLAAGDTGAVDGLRPGA---------G 458
Query: 67 RIVGL--FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
I L L + +R D + A R A + E R ++
Sbjct: 459 EIGALAGALTVFRDALNDRTRRMREDMDRAEAAAAAERAAQQAALAAAEAERDRDRQEQA 518
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
Q A ER +R + + + + + T A E
Sbjct: 519 RQEA-ERQERRRLRDAAEAERAAQLQEQQLVVSRLAEALRAMSAGDLTARIETAFPAAYE 577
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ + ++ + +++ S S+ +A L++ +
Sbjct: 578 GLRSDFNQAVTRMAELLSEIVRASGSVQSEAHQLGAASGELGRRTETQAASLEETAAAMN 637
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF--SSKMKSKETSAFLE 302
+ S ++ + + V RETT +EV ++ ++D SS+ S+ TS +
Sbjct: 638 QMAASVAQALQGAREAARAVGQTRETTAAGREVVRRTLQAMTDIAQSSEQISRITSVIDD 697
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
+ ++ + + + + + ++++++ A L++ ++ +
Sbjct: 698 IAFQTNLLALNAGVEAARAGEAGRGFAVVASEVRGLAQRSSEAAREIAGLIAT--SVRQV 755
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
E L + A+ D +++ + +I S G+++I V +L + H
Sbjct: 756 GEGVELASGSDAALGRIEDLVSRLDALLAAIETGAGEQSA-GISEITAAVNQLDQVTQHN 814
Query: 423 DDCLNNFERNPQDIV 437
Q ++
Sbjct: 815 AAMFEENAAATQALL 829
>gi|23821025|ref|NP_062739.2| CAP-Gly domain-containing linker protein 1 [Mus musculus]
gi|81879884|sp|Q922J3|CLIP1_MOUSE RecName: Full=CAP-Gly domain-containing linker protein 1; AltName:
Full=Restin
gi|13938150|gb|AAH07191.1| CAP-GLY domain containing linker protein 1 [Mus musculus]
Length = 1391
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 45/388 (11%), Positives = 104/388 (26%), Gaps = 12/388 (3%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L V G G + E + D PL + A T+
Sbjct: 211 LKVGDRVLVGGTKAGVV---RFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPK 267
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L + I +T + S + S S + + +
Sbjct: 268 YGLFAPVHKVTKIGFPSTTPAKAKAAAVRRVMAATPASLKRSPSASSLSSMSSVASSVSS 327
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
+ ++ + + + Q ++ TS I
Sbjct: 328 KPSRTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEI 387
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + +++ + V + E +E +K++ L +
Sbjct: 388 EQELALARDGHDQHVLELEAKMDQLRTMVEAADREKVELLNQLEEEKRKVEDLQFRVEEE 447
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+K S A+R + + Q+ +
Sbjct: 448 SITKGDLEVATVSEKSRIMELEKDLALRAQEVAELRRRLESSKPPGDVDMSLSLLQEISA 507
Query: 352 LMSKINNI--------SALKENNSLFKDA-QRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
L K+ I ++LKE+ ++A Q+ + +EK+++ S+ + L + ++
Sbjct: 508 LQEKLEAIHTDHQGEMTSLKEHFGAREEAFQKEIKALHTATEKLSKENESLRSKLDHANK 567
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ I KL+ + + +
Sbjct: 568 ENSDVIALWKSKLETAIASHQQAMEELK 595
>gi|271968705|ref|YP_003342901.1| monosaccharide-transporting ATPase [Streptosporangium roseum DSM
43021]
gi|270511880|gb|ACZ90158.1| monosaccharide-transporting ATPase [Streptosporangium roseum DSM
43021]
Length = 363
Score = 38.8 bits (87), Expect = 1.8, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 9/61 (14%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
T +G+ + I+ + W S G + P S R G+P
Sbjct: 200 ANGTILGIPNLLIVAALVTGVMWFVLSRTVFGRYIYAVGSNPESA---------RLAGVP 250
Query: 65 V 65
V
Sbjct: 251 V 251
>gi|47229709|emb|CAG06905.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1227
Score = 38.8 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 22/290 (7%), Positives = 89/290 (30%), Gaps = 5/290 (1%)
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ +++ + + L + + I + L ++ + + +
Sbjct: 597 DNLQRVKQKLEKEKSEYKMEIDDLASNMEAIAKSKSNLEKLCRTLEDQLSELKTKNDENV 656
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + + L++ ++ + + + D++ + + +
Sbjct: 657 RQLNDVSAQKARLQTENGEYVRQLEEKEALVSQLTRGKQAYTQQIDELKRHIEEEVKAKN 716
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
Q H + + ++ + + S +N + + TD Q+
Sbjct: 717 ALAHAVQSSRHDCDLLREQYEEEQEAKAELQRSMSKANSEVAQWRTKYETDAIQRTEELE 776
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKE-NNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ + L D+ + SK ++ K+ +D + + +++
Sbjct: 777 EAKKKLAQRLQDAEESIEAANSKCASLEKTKQRLQGEVEDLMIDVERANAVAANLDKKQR 836
Query: 392 SIGNNL----QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ ++ ++ + ++ ++ D+ + +RN Q ++
Sbjct: 837 NFDKATLEHEESKILRVQLELTQVKSEIDRKLSEKDEEMEQIKRNSQRVI 886
>gi|211578412|ref|NP_001096096.2| slow myosin heavy chain 2 [Danio rerio]
gi|209972646|tpg|DAA06339.1| TPA_exp: slow myosin heavy chain 2 [Danio rerio]
Length = 1939
Score = 38.8 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 41/372 (11%), Positives = 117/372 (31%), Gaps = 13/372 (3%)
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATER 131
+ AKA + + RT+ G I T++K K R
Sbjct: 1233 DVVSNMEQIVKAKANLEKMCRTLEDQMSEYRTKAEEGQRTINDFTMQKAKLQTENGELSR 1292
Query: 132 N---QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
+ ++++ G + E+ +++ + + + ++ E
Sbjct: 1293 QLEEKDSLVSQLTRGKQSYTQQIEDLKRQLEEEVKAKNALAHAVQSARHDAELLREQYEE 1352
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
+ T K A LQ + +E +
Sbjct: 1353 EQEAKAELQRSLSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEAVEAVNA 1412
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
++ K+ ++ N + D+ + +D +F ++ + E+ +
Sbjct: 1413 KCSSLEKTKHRLQNEIEDLMVDVERSNAAAAALDKKQRNFDKV-LAEWKQKYEESQTELE 1471
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
S + S S E+ + +++ +E++ + ++ ++L ++ E+
Sbjct: 1472 SAQKESRSLSTELFKLKNSYEESLDHLESMKRENKNLQEEISDLTEQL------GESGKN 1525
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDC 425
+ ++ ++I + +L++ L + + ++ ++ D+
Sbjct: 1526 IHELEKVRKQLEQEKQEIQTALEEAEGSLEHEEGKILRAQLEFNQVKADIERKLSEKDEE 1585
Query: 426 LNNFERNPQDIV 437
+ +RN Q +V
Sbjct: 1586 MEQAKRNQQRVV 1597
>gi|15893416|ref|NP_346765.1| membrane-associated methyl-accepting chemotaxis protein
[Clostridium acetobutylicum ATCC 824]
gi|15022946|gb|AAK78105.1|AE007524_10 Membrane-associated methyl-accepting chemotaxis protein with HAMP
domain [Clostridium acetobutylicum ATCC 824]
gi|325507528|gb|ADZ19164.1| Membrane-associated methyl-accepting chemotaxis protein with HAMP
domain [Clostridium acetobutylicum EA 2018]
Length = 555
Score = 38.8 bits (87), Expect = 1.9, Method: Composition-based stats.
Identities = 53/448 (11%), Positives = 135/448 (30%), Gaps = 20/448 (4%)
Query: 5 NYYTSVGLFVVSILFFS--FFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD---SSVR 59
+ VG V+ + F I L++ N + E ++ G + +S D R
Sbjct: 10 SSKILVGFVVIIFISAVSGVFGILNLNKVNNSNTETYEKMLVPTGELVSISNDFGTMRAR 69
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ ++ +D+ S A + S + TI T I ++
Sbjct: 70 VRDV----VIETQMDKMDKFSSDFNAASSDFDKVLESFSQTILTADGKTILSEIKDAKKE 125
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ Q Q + A N + + I + + +++ + + T
Sbjct: 126 YVQYAQQAMELSKQNKNVEAMAIVRNQLTVAHDKLATSIKNVTDMKKELAKESTDQNSAT 185
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ +L + + M + K + + D +
Sbjct: 186 AKTSIIETIILVILGAGLGVAMAVLTSRSIGNPMKKITEVSEKIADGELDVELKTDRKDE 245
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+L N + + +NT D + S + + TS+
Sbjct: 246 IGVLMNTFNKMVSNLNLVMSSMNTAADQVAIGSKQVSDSSIMLSQGSSDQASAVEELTSS 305
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL---NDSSQKFAELMSKI 356
E + + N ++ A + + N ++ + +++ N +S+ ++++ I
Sbjct: 306 MEEIASQTKVNANNATEASELGNEVKSNAEKGNNQMKQMLNSMDDINAASKNISKIIKVI 365
Query: 357 NNISALKENNSLFKDAQRA--------MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
++I+ SL + A + + + ++ + +
Sbjct: 366 DDIAFQTNILSLNAAVEAARAGQYGKGFAVVAEEVRNLAAKSANAARETTEMIENSIRKV 425
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +ET D+ + ++ Q +
Sbjct: 426 ETGTEFAKETAAALDEIVQGISKSAQLL 453
>gi|121998647|ref|YP_001003434.1| diguanylate cyclase [Halorhodospira halophila SL1]
gi|121590052|gb|ABM62632.1| diguanylate cyclase [Halorhodospira halophila SL1]
Length = 301
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 15/92 (16%), Positives = 31/92 (33%), Gaps = 15/92 (16%)
Query: 10 VGLFVVSILFF--SFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
V F+ + + WL R +++ + + + + VR GI G
Sbjct: 67 VVAFISAGTALGVAALFGLWLRR---------QLVAPLHEAAVSIESGGPVRLRGIA-GA 116
Query: 68 IVGLFLDQEYPNHSLAKAL---IRPDTPLYPS 96
+ L + +E N + + D L+
Sbjct: 117 VRELRMVEERYNRAREAMEQRIVELDQQLHVD 148
>gi|950344|gb|AAA74506.1| dystrophin [Homo sapiens]
Length = 428
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 51 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 110
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 111 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 170
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 171 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 227
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 228 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 287
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 288 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 340
>gi|294654781|ref|XP_456854.2| DEHA2A12056p [Debaryomyces hansenii CBS767]
gi|199429145|emb|CAG84829.2| DEHA2A12056p [Debaryomyces hansenii]
Length = 1133
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 27/301 (8%), Positives = 94/301 (31%), Gaps = 6/301 (1%)
Query: 150 NAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPH 209
+ + + + +K I+ + K +I ++ + ++
Sbjct: 737 SLKTSISHKDQLIENFKKKIDELNKSNEELSGSISKLNASNNELQNSNKDLVSEKNTLVT 796
Query: 210 SSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRE 269
+ N + + K ++ + + + SS+ + E
Sbjct: 797 KQELSFEKNNSLNNELLKLQSEKQKLSTELETMKDKHDSLVKDKTSSSNSIQTFRQQYEE 856
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ +E +ID+L + + + + + ++ + +
Sbjct: 857 LSMKSKESLLRIDNLEDELNESR--TMLQERTRESSTIRRMLVDAEEQLKLKNHDFKCEL 914
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSL-FKDAQRAMHTFRDTSEKINR 388
+ I+ ++ N + + +I+ ++ +N L +D + + + E++
Sbjct: 915 TKISKEKSEVENNCQAL--IKKKQREIDEFKSITDNYLLKIQDLENKCNELKQQYEELQS 972
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
N + + + Q + L+ ++ + +FE + E+ ++K
Sbjct: 973 EKSKNKNTISDK-DENFEETQQTIETLRRSLQASSKKVKDFENLNNILKRLNEESNLKFE 1031
Query: 449 K 449
+
Sbjct: 1032 R 1032
>gi|145642155|ref|ZP_01797724.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Haemophilus
influenzae R3021]
gi|145273146|gb|EDK13023.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Haemophilus
influenzae 22.4-21]
Length = 558
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 19/230 (8%), Positives = 73/230 (31%), Gaps = 10/230 (4%)
Query: 212 DSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT 271
+ + D + +++ + + + + +
Sbjct: 77 YHWLSEQELQDPDNPTECILRRVINADGRSKAFINSTPVSASQLKEIAQYLVHINGQHAS 136
Query: 272 QTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIST 331
Q + ++ + + + + + + + +++ + E +RQ +
Sbjct: 137 QLLLKNDYQLQLVDNFAAHSELLTKMREDYQAWKNLQNQVKTFQQKVAENEARRQLLQYQ 196
Query: 332 INTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDTSEKI 386
++ ++ N+ + E +S+ ++ L + + + +
Sbjct: 197 VDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSVLQILSENDTVNIDSLLYRA 252
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 253 TQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVRNLSSNIEQDPQLL 301
>gi|226940137|ref|YP_002795210.1| RecN [Laribacter hongkongensis HLHK9]
gi|226715063|gb|ACO74201.1| RecN [Laribacter hongkongensis HLHK9]
Length = 554
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 29/212 (13%), Positives = 65/212 (30%), Gaps = 18/212 (8%)
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI-----DHLLSDFSSKMKSKETSA 299
+ ++ + +S + ++ T +++G+ + H + +
Sbjct: 90 DTELLIRRVIDASGRSRCWLNGRSATLAQLKDIGEALVDIHGQHAHQSLNKPDTQRRLLD 149
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
+ +RS + + QRQ+ E L + AEL +
Sbjct: 150 AYAGAVGLATEVRSCFDTWQTVKHQRQEAERHAAEFERERERLVWQISELAELQLAPDEW 209
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS-------------GLN 406
L +S AQ E IN +I + L +
Sbjct: 210 EQLTAQHSRLAHAQELTEAAHSAVELINEADGAILSQLAQVQSRLGKLADVDPQLKDTVG 269
Query: 407 DIQNLVRKLQETVNHFDDCLNNFERNPQDIVW 438
+ ++ +L+E V D + E++P ++
Sbjct: 270 LLDSVEAELREVVYALRDYGGDIEQDPAELYR 301
>gi|157736585|ref|YP_001489268.1| methyl-accepting chemotaxis protein [Arcobacter butzleri RM4018]
gi|157698439|gb|ABV66599.1| methyl-accepting chemotaxis protein [Arcobacter butzleri RM4018]
Length = 642
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 19/209 (9%), Positives = 68/209 (32%), Gaps = 4/209 (1%)
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ + + N +++ + V T +E ++ + S+ S ++ +
Sbjct: 387 KMLVENKTNGTTLAHSSNILLENVDKLNKSSTSTAANLEETAASLEEMTSNLRSSTENVQ 446
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+ + + + + ++ + Q T + L + +
Sbjct: 447 KMSSIASSVTNRAKNGEELANQTVESMQEINSQITSINEAITVIDQIAFQTNILSLNAAV 506
Query: 357 NNISALKENNS---LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
+A + + + + + + +I + S + + + + N
Sbjct: 507 EAATAGEAGKGFAVVAAEVRNLATRSAEAAREIKEIVESATSKAND-GKVIATQMINGYT 565
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREK 442
+L + + + + NFE + ++ + G E+
Sbjct: 566 ELNKDIMETIELIKNFENSSKEQLLGIEQ 594
>gi|330946350|gb|EGH47466.1| PqiB family protein [Pseudomonas syringae pv. pisi str. 1704B]
Length = 121
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 13/103 (12%), Positives = 35/103 (33%), Gaps = 5/103 (4%)
Query: 2 ESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRF 60
E K V L + + + I + + + + +GL + + V++
Sbjct: 16 EVKRRRLRVSLIWLVPIVAAIIGI--SMALHDWMNIGPRITVSFLT-AEGLEANKTQVKY 72
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRT 103
+ +G + + L ++ H LA + + + +
Sbjct: 73 KNVVIGMVTDISLSEDRT-HVLATIELNTSATPFTRVDSRVSN 114
>gi|315606128|ref|ZP_07881159.1| YhgE/Pip domain protein [Actinomyces sp. oral taxon 180 str. F0310]
gi|315312410|gb|EFU60496.1| YhgE/Pip domain protein [Actinomyces sp. oral taxon 180 str. F0310]
Length = 734
Score = 38.8 bits (87), Expect = 2.0, Method: Composition-based stats.
Identities = 49/478 (10%), Positives = 134/478 (28%), Gaps = 41/478 (8%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY--DGPMAEVIIRIPGSVDGLSTDSSVRF 60
+ + + + VV L W + + + G + I I + G V
Sbjct: 13 RRAHRSLIASVVVFGLVVIPSLFTWFNVAASWDPFGNTKSLRIAIANTDAG-YKSDLVPL 71
Query: 61 NGIPVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ I +G + L + + ++ T A + +
Sbjct: 72 H-INIGDSVVSALRKNDNFDWVIDSQEAAIEGTRSGAYYAAIVIPADFSQDMLTFFDGGA 130
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ + ++N + A + + +S+ + + N T
Sbjct: 131 SSAPMTYYVNEKKNGISPKIAGQGAEAVSAQVNQIFVQTLSEVAFDTATSVGNALSSPTA 190
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + ++ + + T+ D T+L + +
Sbjct: 191 VNTVTALDN----RVQTVASRLRTAADSADAYASLVGSSVTLIDSTTTLVDGLGSAKGSA 246
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS-SKMKSKET 297
+ + +S +S V + + + + + +D++ ++ S S + T
Sbjct: 247 QSAVSSAQAGASGLGSAASAAVSSVSDAISSSQSSLDSLSGAVDNVYANGSTSASDAAST 306
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
+ D+ ++ +SI + S+++ ++ + L + ++
Sbjct: 307 LRSQATVLDAQASSFASIKSTLASLPGSPVSQSSLDRLQAASDRLTAVANGLRAAALDVD 366
Query: 358 NISALKEN-----NSLFKDAQRAMH--------TFRDTSEKINRY--------------I 390
+ A + N L A+ A+ R E + +
Sbjct: 367 SKVANAQAGHAAVNGLIAQARSAVDGLSSDYETNLRPQLESLASTLASAQSSLSAARTSL 426
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER---NPQDIVWGREKGSV 445
S + N S S + L L + + + ++ G + ++
Sbjct: 427 ESATSTASNGSGSARAGLSLLRENLTGAATSLREAAGKLDSLHASISEVFAGGDLTTL 484
>gi|297284510|ref|XP_001105175.2| PREDICTED: vacuolar fusion protein MON1 homolog B-like isoform 1
[Macaca mulatta]
Length = 560
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 128 LSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDTIRAIYAEDHKLVFLQQGPLLLV 187
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F+ D++ L+ + T D
Sbjct: 188 AMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERT---LDR 244
Query: 425 CLNNFERNPQDIVWG 439
L++ E++P ++ G
Sbjct: 245 LLDSVEQDPGALLLG 259
>gi|332158779|ref|YP_004424058.1| chemotaxis protein [Pyrococcus sp. NA2]
gi|331034242|gb|AEC52054.1| chemotaxis protein [Pyrococcus sp. NA2]
Length = 703
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 44/390 (11%), Positives = 114/390 (29%), Gaps = 24/390 (6%)
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIR--PDTPLYPSTTATIRTQGLAGITYIEL 114
V NG L L+ L S I Q + +
Sbjct: 141 PVYVNG---------ELKGVIGIDVFVSTLLDETKKIKLGESGYVVIVNQEGLTLAHPNE 191
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTS-KKISDSSRHIQKIIENIE 173
+ K + + + Y + + K ++ I +
Sbjct: 192 EYINKLNIFQVPELKDLAEELKKNKESGYVVYNFQGIKKVAGYKRMKTTGWIVIATVPLP 251
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ T+ + + A I + + + K T + + L
Sbjct: 252 EITKPTLKAADAVVMKTAKTIYEGLGIAIIIIIAMIVAMYKITSSILAPLEKLKMAAQAL 311
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL-LSDFSSKM 292
+ + Q+ + + ++ T + ++++ L D ++ +
Sbjct: 312 AEGRLKEVTEYVKQIRYLENDEIGALIRAFEAVSKDLVGTLTAITKRLERLAEGDLTNGL 371
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ I D S ++ +I I ++ N++ +++++ ++ + E
Sbjct: 372 TVEAKGELRGLIEDIKSVTKTLRESIGSIVQIADELEKRANSLAQVSNDVTEAINQVNEA 431
Query: 353 MSKIN-----NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG--- 404
+ +++ + E K E+ + + + SQ G
Sbjct: 432 IQQVSTEAQRQQETINEITEGMKLVAETSEESVKVMEEFESAVNEVVSIANEGSQKGDDA 491
Query: 405 ---LNDIQNLVRKLQETVNHFDDCLNNFER 431
+ DIQ+++ +++ETV+ + N E
Sbjct: 492 LKRIEDIQHMMSRIEETVSKVSEMSRNIEE 521
>gi|221194691|ref|ZP_03567748.1| hypothetical membrane protein with similarity to phage infection
protein [Atopobium rimae ATCC 49626]
gi|221185595|gb|EEE17985.1| hypothetical membrane protein with similarity to phage infection
protein [Atopobium rimae ATCC 49626]
Length = 734
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 40/470 (8%), Positives = 118/470 (25%), Gaps = 52/470 (11%)
Query: 24 SIYWLSRSNQYD--GPMAEVIIRIPGSVDGLSTDS--SVRFNGIPVGR-----------I 68
WL+ +D G +E+ I + +G S V + +G I
Sbjct: 37 LYAWLNIEGSWDPYGHTSELKIAVANDDEG-YKSSLIPVN---VNIGERAASKLRESTSI 92
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
++ + + + + + + + + +I
Sbjct: 93 NYIYTTHDDAMEGVRSGRYYAALIIPKDFSKNLLSGLGSDGKSDPDKAAAITYVSNEKIG 152
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
A S S + ++ + + ++
Sbjct: 153 AIAPLVTDK-AAESARTQIESGFTDALTEVGAGVLGELSTSLDDPHLMNAAATLDTSLER 211
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
++ + + + + S ++ + + + + +
Sbjct: 212 SISTLHTISEHIKLYGDLISSSQSIVSSTSDLMGSTNTAAQNASNALSSASDGTDALKAG 271
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + + +T +D SS +++ +
Sbjct: 272 ALSAGNAVDSALASTTESFEALDGAIDSALDTASTTAADTSSNLRALADKVGGIAQRYQS 331
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL-----K 363
+ + + + I I+ ++ + I+ ++
Sbjct: 332 LLADIKNIQAALPSHLQSVLDAPIARIQGTIDTQQSLQERLSSTADAIDKGVSVSESDRA 391
Query: 364 ENNSLFKDAQR--------------------------AMHTFRDTSEKINRYIPSIGNNL 397
E SL A++ A S IN I + + +
Sbjct: 392 EIKSLVAQAKKDVASTQSELKNTLNDQLDSLSSALDGATSNTSAISASINETISQLKD-V 450
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKI 447
+ + L+ I+ + Q+ ++ D L+ + + G + G+V+
Sbjct: 451 SSSTNKSLDSIKEDLATAQKRIDSLADSLSTIHTSLSQALAGGDLGAVRR 500
>gi|158290158|ref|XP_311738.4| AGAP003449-PA [Anopheles gambiae str. PEST]
gi|157018321|gb|EAA07351.4| AGAP003449-PA [Anopheles gambiae str. PEST]
Length = 2026
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 32/348 (9%), Positives = 100/348 (28%), Gaps = 6/348 (1%)
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIF-QIATERNQRAMITATPSGINYFISN 150
L + A +R + + + ++K + ++A + + T + ++
Sbjct: 1485 QLQEGSDAQLRLETKINKLQQHVRAVHEDKTNLEARLAQKTSALQSTEETLRQKSDELTA 1544
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ ++ S + ++E+ L + + + + + +
Sbjct: 1545 LREKATQLEQSLTSTSEERTHLEERLDKCRQSGARLESDKRHLQDELARTEARATKLDLQ 1604
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+ + +++ ++ + V V ++
Sbjct: 1605 RVALEGDIQRLQMAMQEKDCTVRNQQERLENQQRSLTQLEDRCVALKSTVDQLKERLQAA 1664
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
T E+ +I L + +S + + + + S + R + ++
Sbjct: 1665 AITETELRGEISGLQRH--NADQSHTFALGQDKLKQLQKTLSGSENERRVLAERLDAAQH 1722
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
TIN + DS+ + E +++ + E+ + +
Sbjct: 1723 TINELRRNQQASQDSTTRLQEQLAECEVQKSTLESQLRLAKWNQETSEQLAATGGNLGGG 1782
Query: 391 PSIGNNLQNFSQSGLNDI---QNLVRKLQETVNHFDDCLNNFERNPQD 435
+ Q + Q +L+ V ++ + ER+ Q
Sbjct: 1783 SGGAGGNTSGDQELTRQLISSQRERNELRNKVEALNEKIRTLERDQQR 1830
>gi|186474898|ref|YP_001856368.1| feruloyl esterase [Burkholderia phymatum STM815]
gi|184191357|gb|ACC69322.1| Feruloyl esterase [Burkholderia phymatum STM815]
Length = 571
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 6/48 (12%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS------VRFNGIPVGR 67
+ + + V+ R P DG+ DS VR G+ +G+
Sbjct: 217 MYFAGGSTGGREGYTVMQRFPDDYDGVIADSPALNFSGVRLIGVRIGQ 264
>gi|50083825|ref|YP_045335.1| IISP family preprotein translocase [Acinetobacter sp. ADP1]
gi|49529801|emb|CAG67513.1| putative SecYEG protein translocase auxillary subunit (YajC)
[Acinetobacter sp. ADP1]
Length = 109
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 14/94 (14%), Positives = 36/94 (38%), Gaps = 13/94 (13%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+ ++ + F+ + W +S + V+ L S V F G +GRI +
Sbjct: 24 ILMIVVFVAIFYFLIWRPQSKRAKEHRTL--------VESLGVGSEVVFAGGLMGRITKI 75
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
D +++ + + + ++ ++ +G
Sbjct: 76 EGD-----YAVVELSRGVEVKIQRASVISVLPEG 104
>gi|75075677|sp|Q4R4E4|MON1B_MACFA RecName: Full=Vacuolar fusion protein MON1 homolog B
gi|67971358|dbj|BAE02021.1| unnamed protein product [Macaca fascicularis]
Length = 547
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 16/125 (12%), Positives = 46/125 (36%), Gaps = 9/125 (7%)
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFR 380
+ + +T+ + + S + + + ++ + + L++ L R +
Sbjct: 125 RYGSVEALSATMGVMTALVSFVQSAGDTIRAIYAEDHKLVFLQQGPLLLVAMSRTSQSAA 184
Query: 381 DTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
++ I + L F+ D++ L+ + T D L++ E++P
Sbjct: 185 QLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERT---LDRLLDSVEQDPG 241
Query: 435 DIVWG 439
++ G
Sbjct: 242 ALLLG 246
>gi|115525924|ref|YP_782835.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
gi|115519871|gb|ABJ07855.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
Length = 655
Score = 38.8 bits (87), Expect = 2.1, Method: Composition-based stats.
Identities = 30/306 (9%), Positives = 94/306 (30%), Gaps = 15/306 (4%)
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
K+ + + + + + + S + +++HT ++
Sbjct: 348 FKVKAEQKARDEAEAQAAEEQRQIDRRRQEMFRLADQFESAVGEIVHTVSSASTELEASA 407
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
T T T L + A ++ + ++++ ++ S +++ V +
Sbjct: 408 TTLTSTALRSQEQAQAVAAASEEASTNVQSVASATEEMSSSVNEISRQVQNSSRIAGEAV 467
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT--DQRQKIISTIN 333
+ + + + + ++ L N +N+ + + I + + +
Sbjct: 468 DQARNTNASVGELATAASRIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVAS 527
Query: 334 TIENITSNLNDSSQKFAELMSKINN-----ISALKENNSLFKDAQRAMHTFRDTSEKINR 388
++ + ++ + ++ ++ I ++A++E T E+
Sbjct: 528 EVKALAEQTAKATGEISQQIAGIQAATHGSVTAIQEIGVTIGQMSEISSTIAAAVEEQGA 587
Query: 389 YIPSIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDIV--WGR 440
I N+Q +Q D+Q + R+ + GR
Sbjct: 588 ATQEISRNIQLAAQGTQQVSANICDVQRGASATGSASTQVLSAAQSLSRDSNRLKDEVGR 647
Query: 441 EKGSVK 446
+V+
Sbjct: 648 FLATVR 653
>gi|217971262|ref|YP_002356013.1| peptidase M23 [Shewanella baltica OS223]
gi|217496397|gb|ACK44590.1| Peptidase M23 [Shewanella baltica OS223]
Length = 362
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 25/195 (12%), Positives = 63/195 (32%), Gaps = 6/195 (3%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
++ +V +T + + + E+ Q+ D L + + +
Sbjct: 54 IASAAKKVNSTKNSLAQIDTKLIELKQRQDEL-ETLKVSQQQTLSKQLSSAYLAGNHDYT 112
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS-KINNISALKENNSLFKD 371
+ + + + + ++N+ Q EL K++ S K+ L +
Sbjct: 113 KMMLNQQSPATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQTSKQKQLTKLVAE 172
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
Q ++ R I + L + +++ L + + L +
Sbjct: 173 QQVQAKRLSQEQDQRQRTITELQRTLNSKGA----ELEQLQIEEASLKRVVEQALRAMKD 228
Query: 432 NPQDIVWGREKGSVK 446
NP +G++ G +K
Sbjct: 229 NPSMEGFGKQSGKLK 243
>gi|87116412|dbj|BAE79362.1| myosin heavy chain embryonic type 2 [Cyprinus carpio]
Length = 1935
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 32/295 (10%), Positives = 88/295 (29%), Gaps = 10/295 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E ++I + + + ++ E M
Sbjct: 1306 QAFTQQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 1365
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + + K+ ++ V
Sbjct: 1366 SEVAQWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEV 1425
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 1426 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKM 1484
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ +++ +E + + Q+ ++L ++ E + ++A
Sbjct: 1485 KNSYEESLDQLETLKRENKNLQQEISDLTEQL------GETGKSIHELEKAKKAVETEKA 1538
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+I + L++ L ++ + ++ + D+ + +RN Q +
Sbjct: 1539 EIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQIKRNSQRV 1593
>gi|47230389|emb|CAF99582.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1905
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 15/274 (5%), Positives = 71/274 (25%), Gaps = 5/274 (1%)
Query: 167 KIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITS 226
++ + +E+ E ++ + ++++ +
Sbjct: 1225 ELQQELERSTQECKRLREKLAKTETELQTTVEELFQVKIEREQYQTEIRDLQDQLSEMHD 1284
Query: 227 LDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLS 286
K + + S +++ +++E +E +
Sbjct: 1285 ELDTAKKSVADGERTAMMAVTPSPLFDFSVWADMMHLKLELQEILLAKEEQEDVLKRRER 1344
Query: 287 DFSSKMKSKETSAFLENIAD---STSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
+ ++ + + + + + + +Q + + + +
Sbjct: 1345 ELTALKGALKEEVAAHDQEVDKLKEQYEKEIGRLQLSLEEAKQSSAAVVREKAEVEAAKG 1404
Query: 344 DSSQKFAELMSKINNISALK-ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ L + + E + R + + ++ + + + +
Sbjct: 1405 AVEGQAGRLTLETERLRRRAQELENEVAKLNRIIDEAKLQESRLGDRVGRLEKE-KKQLE 1463
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
L +I+ ++ L + +RN +
Sbjct: 1464 ESLAEIREQEEEMSRANRALTVRLEDVQRNLNRL 1497
>gi|167855991|ref|ZP_02478737.1| preprotein translocase subunit YajC [Haemophilus parasuis 29755]
gi|219871166|ref|YP_002475541.1| preprotein translocase subunit YajC [Haemophilus parasuis SH0165]
gi|167852873|gb|EDS24141.1| preprotein translocase subunit YajC [Haemophilus parasuis 29755]
gi|219691370|gb|ACL32593.1| preprotein translocase subunit YajC [Haemophilus parasuis SH0165]
Length = 97
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 10/90 (11%), Positives = 30/90 (33%), Gaps = 11/90 (12%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F++ + F+ + + ++ + + GLS V +G +G+I +
Sbjct: 10 IFILVVFGLIFYFMIYRPQAKRQKQQRELL--------AGLSKGDEVLTSGGLIGKITKV 61
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
D + + + + +
Sbjct: 62 TADNDN---VVIALNDTTEVTIKRDFVVAV 88
>gi|163740305|ref|ZP_02147699.1| branched-chain amino acid ABC transporter, permease protein
[Phaeobacter gallaeciensis 2.10]
gi|161386163|gb|EDQ10538.1| branched-chain amino acid ABC transporter, permease protein
[Phaeobacter gallaeciensis 2.10]
Length = 297
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYD 35
M + G F +S + ++ W+S+ + D
Sbjct: 181 MGIRANTVIAGAFALSGMLAGVAAVLWVSQRSSVD 215
>gi|153846571|ref|ZP_01993868.1| mce related protein [Vibrio parahaemolyticus AQ3810]
gi|149744887|gb|EDM56267.1| mce related protein [Vibrio parahaemolyticus AQ3810]
Length = 123
Score = 38.4 bits (86), Expect = 2.2, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVVK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLGSIYVDADIYPEATKLLNDKTRFWL 111
>gi|317150906|ref|XP_001823906.2| structural maintenance of chromosomes 5 smc5 [Aspergillus oryzae
RIB40]
Length = 1201
Score = 38.4 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 98/300 (32%), Gaps = 6/300 (2%)
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
A++ S +I + + + + + LT T + + +
Sbjct: 238 AQSFSIQIDNLCQFLPQDKVSEFAALTPIELLNSTQRAAAGAEMIEWHDNLKQLRARQKK 297
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN-NFVKSSDQVINTVHDVRE 269
+ N + + ++ D++++ Q E + + + + +D ++
Sbjct: 298 LQADNKSDKDLLTNLEERQEMQRADVERMRQRAEIKRKIEMLELTRPMVKYKDMHNDFKD 357
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ +E+ + ++L ++ +++ D+ + + + E T
Sbjct: 358 KRRRKEEIALEYENLKAELEPSLRAVNAKQEYCLQIDNVVSYKKARVEEAERTASALGKK 417
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
+ ++K + SK + + + N L + F ++ N
Sbjct: 418 IEQYEEKMKNLEKEIDAEKKSNANSKEDGMRIQQTINKLNRQLAEGAIEFD--ADWYNER 475
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI--VWGREKGSVKI 447
I + N I++ R L E + D + ER+ Q + GR++ +K
Sbjct: 476 IREKRREAREIEDKA-NQIKDDRRPLSEALKEKTDKVTELERHLQRLESQSGRQEEKLKQ 534
>gi|116754465|ref|YP_843583.1| chromosome segregation protein SMC [Methanosaeta thermophila PT]
gi|116665916|gb|ABK14943.1| condensin subunit Smc [Methanosaeta thermophila PT]
Length = 1171
Score = 38.4 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 20/202 (9%), Positives = 62/202 (30%), Gaps = 12/202 (5%)
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ I+ + ++ D+ E ++ + ++D + ++ ++ + A
Sbjct: 296 VRREIEEIRGKIAREETRIEAADADIEEADRSLSQCFIEMDRVRAEIAAISEQLSDKAMR 355
Query: 302 EN--IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
+ S I+D + + + + D+ + E + + + +
Sbjct: 356 RAGIQGELDDQRSQLSSLRANISDADSRFAKYREELAQLIKEIEDTRSQIGERLRERDRL 415
Query: 360 S-----ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
A E + + A+ + S + R + + D+ +
Sbjct: 416 LDAIRRASMEKEEIATEITEALSSISAASTESERLEREVESIASEAM-----DLDKRREE 470
Query: 415 LQETVNHFDDCLNNFERNPQDI 436
L+ L +R+ Q +
Sbjct: 471 LESRRLSLRRELAELDRSLQRL 492
>gi|91974817|ref|YP_567476.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
gi|91681273|gb|ABE37575.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB5]
Length = 563
Score = 38.4 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 19/203 (9%), Positives = 52/203 (25%), Gaps = 8/203 (3%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
E + S + + + + + + + + ++ T A
Sbjct: 348 SATEEMSSSITEISRQVQESARIATEAVDQARKTNDSVGMLSAAAARIGDVVELINTIAG 407
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN-I 359
N+ + + ++ + E + Q+ + + + +
Sbjct: 408 QTNLLALNATIEAARAGEAGRGFAVVASEVKALA-EQTAKATGEIGQQITGIQAATDQSV 466
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------DIQNLVR 413
SA+KE T E+ I N+Q +Q D+Q
Sbjct: 467 SAIKEIGQTIGRMSEIASTIASAVEEQGAATQEISRNVQQAAQGTQQVSANITDVQRGAT 526
Query: 414 KLQETVNHFDDCLNNFERNPQDI 436
+ + ++ +
Sbjct: 527 ETGSASTQVLSAAKSLSQDSNRL 549
>gi|262091738|gb|ACY25327.1| DNA repair protein RecN [uncultured actinobacterium]
Length = 538
Score = 38.4 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 14/154 (9%), Positives = 47/154 (30%), Gaps = 2/154 (1%)
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ + A T + + + + ++I + I
Sbjct: 124 KAQREALDAYAKVDLEPLRNARAVVTEIDAALATLGGDDRMRAREIDLLRFQVNEIIEAA 183
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ + L + + ++ A A+ ++ + + ++ N +
Sbjct: 184 LQGADEDELLSREEDVLADAVNYREALWKAVAALSEESGATDNLGSAVSALSN--KEPFA 241
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
++ ++ L +L++ D ++ E NP +
Sbjct: 242 GFVSRLKALQSELEDVSADIRDEADSIEENPTRL 275
>gi|153835226|ref|ZP_01987893.1| mce related protein [Vibrio harveyi HY01]
gi|148868292|gb|EDL67424.1| mce related protein [Vibrio harveyi HY01]
Length = 884
Score = 38.4 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 32/81 (39%), Gaps = 7/81 (8%)
Query: 26 YWLSRSNQYDGPMAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLA 83
+ L + + G + I +P + G + + + GI VG+I L L E LA
Sbjct: 270 FRLYKDLKTAGRGIPIKIALPDDNKISG--EGAPIMYRGIEVGQITDLNLS-EGREVILA 326
Query: 84 KALIRPDT--PLYPSTTATIR 102
A I+P L T +
Sbjct: 327 SAAIQPAFSDMLTSGTRFVLE 347
Score = 38.0 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVMK-----SIHDAGQRVQIYFSD-AAGLIAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLGSIYVDADIYPEAAKLLNDKTRFWL 111
>gi|115523906|ref|YP_780817.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
gi|115517853|gb|ABJ05837.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisA53]
Length = 561
Score = 38.4 bits (86), Expect = 2.3, Method: Composition-based stats.
Identities = 39/363 (10%), Positives = 107/363 (29%), Gaps = 15/363 (4%)
Query: 99 ATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKI 158
A + LA + A R + I G + K+
Sbjct: 197 AFLAVIALAFGIAQFGIAGPIGRLVSDLQAMARGETVEIAGIERGDEIGQTANAVNGIKV 256
Query: 159 SDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFN 218
+ ++ + IE + + + + +++HT ++
Sbjct: 257 MLDEKAKREAEQKIEADRKLAAERKADMHRLADSFERAVGEIVHTVSSASTELEASAQTL 316
Query: 219 TITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVG 278
T T + A ++ + ++++ ++ S ++ V + E
Sbjct: 317 TRTSERSQERTTAVAAASEEASTNVQSVASATEEMASSVSEISRQVQESARIANEAVEQA 376
Query: 279 QKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT--DQRQKIISTINTIE 336
++ + + D +S L N +N+ + + I + + + ++
Sbjct: 377 RQTNASVGDLTSAATRIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVK 436
Query: 337 NITSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ ++ + ++ +S I ++ A++ T E+
Sbjct: 437 ALAEQTAKATGEISQQISGIQAATQESVGAIRSIGDTIAKMSEIASTIASAVEEQGAATQ 496
Query: 392 SIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDIV--WGREKG 443
I N+Q +Q D+Q+ V + + R+ + G+
Sbjct: 497 EISRNVQQAAQGTQQVSSNIVDVQHGVSETGSASTQVLSAAQSLSRDSNRLKDEVGKFLD 556
Query: 444 SVK 446
+V+
Sbjct: 557 TVR 559
>gi|330432696|gb|AEC17755.1| cytochrome c-type biogenesis protein CcmE [Gallibacterium anatis
UMN179]
Length = 179
Score = 38.4 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 14/90 (15%), Positives = 28/90 (31%), Gaps = 9/90 (10%)
Query: 3 SKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLS--TDSSVRF 60
+ + LFV++ + + + + R N +I + D L +R
Sbjct: 4 RRKSRLYLVLFVLAGIAIAAGLMLYALRQNIDLFYTPSEVIYGKNNDDSLKPEPGQRIRV 63
Query: 61 NGIPV-GRIVGLFLDQEYPNHSLAKALIRP 89
G+ V G + P K +
Sbjct: 64 GGMVVAGTVER------DPQSLKVKFQLND 87
>gi|269962311|ref|ZP_06176662.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832971|gb|EEZ87079.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 884
Score = 38.4 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVVK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLGSIYVDADIYPEAAKLLNDKTRFWL 111
>gi|157737039|ref|YP_001489722.1| methyl-accepting chemotaxis protein [Arcobacter butzleri RM4018]
gi|157698893|gb|ABV67053.1| methyl-accepting chemotaxis protein [Arcobacter butzleri RM4018]
Length = 798
Score = 38.4 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 46/406 (11%), Positives = 113/406 (27%), Gaps = 25/406 (6%)
Query: 53 STDSSVRFNGIPVG-------------RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTA 99
+ S V + G VG +I + L + P +
Sbjct: 190 TVSSPVYYKGKFVGAVGVDFSLDFFNKKIGEIKLFENGYGALFDNYGKFIAHPKPENIGK 249
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQI-ATERNQRAMITATPSG------INYFISNAE 152
I+ + + +K + + + P FI+ A
Sbjct: 250 YIKDVTKNETILNAIEKSKNGEKNSYFAKNLKTGTDSYNYVYPIQFGDTKNYWTFIATAP 309
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ S I+ I + ++ + N D ++
Sbjct: 310 ESEYLSEASFVRNFSIVAGIVVLSIIIFVILISMRILNKNLTIIKDGLLGFFSFLNKEEK 369
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + + +++K ++ + ++ + D+V D R
Sbjct: 370 KAHLIELDSQDEFGQMAKVINENIKKTESLILQDNILIDDVKRVVDEVKAGYLDKRIEKS 429
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
T E +++ + + K N + + + +I + K+ I
Sbjct: 430 TQNESLEELKNNFNGMLEITKQNICIDI--NKVVAVLDSFGKLDFRPKIENDNGKVAVGI 487
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
N + I + + K L ++ L + L + A + +T+ + +
Sbjct: 488 NNLATIINEML-VENKTNGLTLDKSSNVLLANVDKLNLSSNEAAASLEETAAALEEVTSN 546
Query: 393 IGNNLQNFSQ--SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ NN QN +Q ++ + ++ N ++ I
Sbjct: 547 VRNNTQNIAQMAKLSTEVTASANQGEKLANETTVAMDEINNQVNLI 592
>gi|167573715|ref|ZP_02366589.1| chemotaxis sensor histidine kinase, putative [Burkholderia
oklahomensis C6786]
Length = 941
Score = 38.4 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 51/180 (28%), Gaps = 1/180 (0%)
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + R T + +S E +
Sbjct: 278 IPRGAADSRAMTDSPRATQTPQHAPAPALRGASPASNSMQLHTELVPNAHAPDPTRDAPA 337
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS-KINNISALKENNSLFKD 371
+ D + + + + ++ L+S ++ + +
Sbjct: 338 MTRDTPATAQDAPHQTARSPDAERASSQMRRVRAETLNRLLSLSGESLVESRWLKPFAES 397
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
R RD S ++ + ++ ++ + LND++ + LQ T D L+ FER
Sbjct: 398 MLRVKRAQRDASRSLDTLVEALADDADPRVRGALNDVRQMFTDLQRTFATRLDELDRFER 457
>gi|261202042|ref|XP_002628235.1| vacuolar ATPase proteolipid subunit C [Ajellomyces dermatitidis
SLH14081]
gi|239590332|gb|EEQ72913.1| vacuolar ATPase proteolipid subunit C [Ajellomyces dermatitidis
SLH14081]
gi|239612044|gb|EEQ89031.1| vacuolar ATPase proteolipid subunit C [Ajellomyces dermatitidis
ER-3]
Length = 160
Score = 38.4 bits (86), Expect = 2.4, Method: Composition-based stats.
Identities = 10/73 (13%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M+S G+ V L + + + GLS +
Sbjct: 53 MKSLIPVVMAGIIAVYGLVIA---VLIAGDLGPPPQKTYSLYTGFMHLAAGLSVGLAGLA 109
Query: 61 NGIPVGRIVGLFL 73
G +G + + +
Sbjct: 110 AGYTIGIVGDVGV 122
>gi|154505869|ref|ZP_02042607.1| hypothetical protein RUMGNA_03411 [Ruminococcus gnavus ATCC 29149]
gi|153793887|gb|EDN76307.1| hypothetical protein RUMGNA_03411 [Ruminococcus gnavus ATCC 29149]
Length = 1773
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 42/405 (10%), Positives = 103/405 (25%), Gaps = 17/405 (4%)
Query: 56 SSVRFNGIPVGRIVGLFL-DQEYPNHSLAKA-----LIRPDTPLYPSTTATIRTQGLAGI 109
+ V NG VG + L D + +AK T T
Sbjct: 1059 ADVLVNGESVGAVTSYTLKDVKENATVVAKFAPAAYTEENRFNFPTEVNGTAITAEAEHF 1118
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
+ T + N + +AE K +
Sbjct: 1119 ALKNVGTGEAWPLQVSAADWASNGYFVNAMNSGDQITLHYHAEKPGKYKATVQFRSGDTN 1178
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ +T + + + + T +
Sbjct: 1179 NGLTWSEADNKIAAQTEVMKIGAGDQAKATHTQDIEFVVNEAGDGTLVFTAPEKNAPQLD 1238
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
+++ ++ N + + + E+ + ++ + + + +D +
Sbjct: 1239 KFDITLVEEKAPVVVNKDALKAAIDAAKEALKEEDKYTEESVKALKDAVAEAEKVAADEN 1298
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ +S A + + ++T + + + +++ + +
Sbjct: 1299 ATQES--VDAATKAVEEATKGLAEKPAVPEADKTALKAVLADAAQKLAGADAYTE--ESV 1354
Query: 350 AELMSKINNISAL-KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDI 408
L ++ + +++ + A+ RD K+ P G I
Sbjct: 1355 KALKDAVDLAQNVFDNSDASQTEVDAAVTAVRDAIGKLQEKPPVQKEFTITAVAHGGGTI 1414
Query: 409 QNL----VRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
V + ++ V FE + V G G+V YK
Sbjct: 1415 DPSGAVKVEEGKDQVFTIQPY-EGFEVK-EVFVNGESVGAVTEYK 1457
>gi|83772645|dbj|BAE62773.1| unnamed protein product [Aspergillus oryzae]
Length = 1185
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 36/300 (12%), Positives = 98/300 (32%), Gaps = 6/300 (2%)
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
A++ S +I + + + + + LT T + + +
Sbjct: 222 AQSFSIQIDNLCQFLPQDKVSEFAALTPIELLNSTQRAAAGAEMIEWHDNLKQLRARQKK 281
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSN-NFVKSSDQVINTVHDVRE 269
+ N + + ++ D++++ Q E + + + + +D ++
Sbjct: 282 LQADNKSDKDLLTNLEERQEMQRADVERMRQRAEIKRKIEMLELTRPMVKYKDMHNDFKD 341
Query: 270 TTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKII 329
+ +E+ + ++L ++ +++ D+ + + + E T
Sbjct: 342 KRRRKEEIALEYENLKAELEPSLRAVNAKQEYCLQIDNVVSYKKARVEEAERTASALGKK 401
Query: 330 STINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
+ ++K + SK + + + N L + F ++ N
Sbjct: 402 IEQYEEKMKNLEKEIDAEKKSNANSKEDGMRIQQTINKLNRQLAEGAIEFD--ADWYNER 459
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI--VWGREKGSVKI 447
I + N I++ R L E + D + ER+ Q + GR++ +K
Sbjct: 460 IREKRREAREIEDKA-NQIKDDRRPLSEALKEKTDKVTELERHLQRLESQSGRQEEKLKQ 518
>gi|303320313|ref|XP_003070156.1| hypothetical protein CPC735_033470 [Coccidioides posadasii C735 delta
SOWgp]
gi|240109842|gb|EER28011.1| hypothetical protein CPC735_033470 [Coccidioides posadasii C735 delta
SOWgp]
Length = 2266
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 27/361 (7%), Positives = 99/361 (27%), Gaps = 13/361 (3%)
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
D + ++ + T+++ + + + A +
Sbjct: 1326 DWDDAISSGQEEELQYRARFFDTHVDEVIGSVLDDRLLPLERTLDTIENSIALLASQTAT 1385
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
+ + + E + + + + +S T +
Sbjct: 1386 RRSTSADVEHSDADDEDEDEDEEAARHRSRSPLNRQNRLIEKIRQVVSESVTTNQTPKEP 1445
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNF---VKSSDQVINTV 264
D +++ +L T + + D+ N
Sbjct: 1446 APLVDLSEIHSSLAELKTLTTQFAPKEIPSVDLSEVHASLSVLKTLVTTKSEQDEASNLK 1505
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
++ ++ ++ + + + ++ + + + R I D
Sbjct: 1506 TEIIDSIVNHPKLAEMMRSSNEEKDAEKLQMQLEGLQSMLRLADDRAEEEYKNRRRIQDS 1565
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELM-----SKINNISALKENNSLFKDAQR----A 375
+ + E+ D++ E + K+ + L++ ++L + Q
Sbjct: 1566 LAESQRLLKAAEDDAVRHRDAAAASEEALRTFKEQKLPEMERLEKQSALLNENQESLQLT 1625
Query: 376 MHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ + + + + +S L++++ ++L+ T++ + + R Q
Sbjct: 1626 LSELSQKNITLQGTLDEYRE-TGDHLRSQLDEVEGENKELRRTISVLKTQMEDSLRARQS 1684
Query: 436 I 436
+
Sbjct: 1685 L 1685
>gi|225018817|ref|ZP_03708009.1| hypothetical protein CLOSTMETH_02767 [Clostridium methylpentosum
DSM 5476]
gi|224948377|gb|EEG29586.1| hypothetical protein CLOSTMETH_02767 [Clostridium methylpentosum
DSM 5476]
Length = 556
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 16/195 (8%), Positives = 55/195 (28%), Gaps = 8/195 (4%)
Query: 242 ILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFL 301
+ ++ + Q N + E + ++ L S++ +S +
Sbjct: 113 TVSMLRELGARLINIHGQHDNQILLSPEKHIDILDSFGELGSLRSEYRQTYQSWKRVRSE 172
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ ++ + + ++ + + A ++ +N
Sbjct: 173 LEEMNQDEAHKAQKLDMLAYQINEIEQAELEPGEDDELEAEARAIRNSARIIESLNEAHQ 232
Query: 362 LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNH 421
L + A + + + Y + + +Q + ++ + +
Sbjct: 233 LLDGEDEMAGASELLSNAASSLSFASEYYSDLSETAER--------LQGISYEVADLLTE 284
Query: 422 FDDCLNNFERNPQDI 436
+NN E +P +
Sbjct: 285 IGSYVNNLEFDPARL 299
>gi|52424796|ref|YP_087933.1| RecN protein [Mannheimia succiniciproducens MBEL55E]
gi|52306848|gb|AAU37348.1| RecN protein [Mannheimia succiniciproducens MBEL55E]
Length = 558
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 74/230 (32%), Gaps = 12/230 (5%)
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
T + + D + +++ + Q + + + +Q
Sbjct: 78 RWLTDHELQDQDNPEECILRRLVNQDGRSKAFINNTPVSASQLKEFGQYLVHINGQHASQ 137
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ ++ L + + ++ N + S +++ E ++Q + +
Sbjct: 138 LLLKNDFQLQALDNFCAHNHLLEQMKTDYLNWKELQSQVKTFNQKCVENEAKKQLLQYQV 197
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
N + N+ EL + +S ++ L + + + ++ +
Sbjct: 198 NELNEFNLRPNEY----QELEEEQRRLSNSEQLTQLSQSVLQILTENETV--NVDSLLYR 251
Query: 393 IGNNLQNFSQSGLN--DIQNLVRKL----QETVNHFDDCLNNFERNPQDI 436
+L++ ++ D Q L+++ QE + N E +PQ +
Sbjct: 252 TTQHLEDLAELDTRYVDAQALLQEALIQVQEAASEIQHLSANIEEDPQVL 301
>gi|192293479|ref|YP_001994084.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris TIE-1]
gi|192287228|gb|ACF03609.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris TIE-1]
Length = 563
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 51/202 (25%), Gaps = 6/202 (2%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
E + S + + +D + + E + H + ++ T A
Sbjct: 348 SATEEMTSSITEISRQVQESARIANDAVDQARRTNESVSDLSHAAARIGDVVELINTIAG 407
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
N+ + + ++ + + + S + ++
Sbjct: 408 QTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTAKATGEISQHITGIQTATGQSVD 467
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------DIQNLVRK 414
A+KE T E+ I N+Q + D+Q +
Sbjct: 468 AIKEIGQTIGRMSEIASTIASAVEEQGAATQEISRNVQQAAHGTQQVSSNITDVQRGATE 527
Query: 415 LQETVNHFDDCLNNFERNPQDI 436
+ + ++ +
Sbjct: 528 TGSASSQVLSAAQSLSQDSNRL 549
>gi|229541781|ref|ZP_04430841.1| methyl-accepting chemotaxis sensory transducer [Bacillus coagulans
36D1]
gi|229326201|gb|EEN91876.1| methyl-accepting chemotaxis sensory transducer [Bacillus coagulans
36D1]
Length = 544
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 33/388 (8%), Positives = 110/388 (28%), Gaps = 14/388 (3%)
Query: 63 IPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKK 122
+ G + G+ L +A +I + + T I + L+ + +
Sbjct: 160 VETGSVFGITLIVSLMLSLVAYLIITHQLRHWYAVTRKISSGDLSAMVKTVGLRNEFHQI 219
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
RAMI +G ++ ++ S ++I T +
Sbjct: 220 GYEINKIILGIRAMIRDFKNGSETVEQISKEQEMELQHISAAFEQI-----SAAVQTFRS 274
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
I N + + + M L + + +
Sbjct: 275 GAEIQGNSVGNANEMVEKMMEKVWEMQEEAENAVAGADEALRDASKGEQAVQLAKNQMKA 334
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ--KIDHLLSDFSSKMKSKETSAF 300
+++ ++ + ++ + TV + + ++ + + +
Sbjct: 335 IQDEASNTASNIRLVAEEAKTVMEKVSAITEISKQTNMLALNASIEAARAGEVGNGFAIV 394
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
+ + + R+ + + + +E+ ++ + ++ I ++
Sbjct: 395 ANEVRKLAEGTNVFEHIMSSMKKTREDLEAAVAQVEHNVKAIDKGMEIVSQTGETIMQLT 454
Query: 361 ALK-ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL------VR 413
+ ++++ + EK+ I I ++F+++ ++ V
Sbjct: 455 KSAVRTQDMVIHNRKSVQNITEEGEKLQEMIKEIKTITEDFTKTVAETNASMEIQVEGVN 514
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGRE 441
+ + + R + G++
Sbjct: 515 SIAQNATQLASEAKHLNRIVKRFRDGKD 542
>gi|295840612|ref|ZP_06827545.1| conserved hypothetical protein [Streptomyces sp. SPB74]
gi|295828083|gb|EDY45739.2| conserved hypothetical protein [Streptomyces sp. SPB74]
Length = 403
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 28/319 (8%), Positives = 85/319 (26%), Gaps = 7/319 (2%)
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
R++ A S ++ + D + + T S
Sbjct: 19 PEGRHRTAPGPPLRSPHPAHGRAPDSPHQPQRDHPMVHPRRRRGLAAHRWTLNGQYGRRS 78
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
A + + +S+ + + +++
Sbjct: 79 EGGAAVNEDYGYQVRRLETQAGGMESELRALRSKLEEAEDLEHELHRVRDDLRSFEDDLG 138
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ D V + + D + + Q ++ ++ ++
Sbjct: 139 TVRGELSELDDDVRSDIRDTEQALKRLTGRVQALEA--HLLAAGGAPLADLDTVDPQWKQ 196
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+ + R + + + L + + ++M +++ ++
Sbjct: 197 LAQSAARGWNARSGLLTEYQRDAHRLKARQYEAALAERDEHRDKVMQAAGILASTPRSSR 256
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN 427
FK A R +EK ++ + + ++ + D L++T +
Sbjct: 257 EFKQAATDFAVSRPLAEKHDQRARKLADTAESAQAALDQD-----DALRKTKTSLIEQGE 311
Query: 428 NFERNPQDIVWGREKGSVK 446
ER ++ GR +++
Sbjct: 312 KAERKLNWLLRGRLADAIR 330
>gi|28898402|ref|NP_798007.1| putative methyl-accepting chemotaxis protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|260879381|ref|ZP_05891736.1| methyl-accepting chemotaxis protein [Vibrio parahaemolyticus
AN-5034]
gi|28806619|dbj|BAC59891.1| putative methyl-accepting chemotaxis protein [Vibrio
parahaemolyticus RIMD 2210633]
gi|308094119|gb|EFO43814.1| methyl-accepting chemotaxis protein [Vibrio parahaemolyticus
AN-5034]
gi|328473620|gb|EGF44455.1| putative methyl-accepting chemotaxis protein [Vibrio
parahaemolyticus 10329]
Length = 467
Score = 38.4 bits (86), Expect = 2.5, Method: Composition-based stats.
Identities = 22/236 (9%), Positives = 75/236 (31%), Gaps = 8/236 (3%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + + + K +++ V +
Sbjct: 133 YYIMTFIGGAMFTMNKALNTLADGDLTARMNFFPVRDEFSEIAITIDKVAEREQKMVQSI 192
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+E+ Q++ ++ + SS++ + + + + + D +
Sbjct: 193 QESVALMQQISSDLNQSIHH-SSEISATQQEHLNSLASATEQMASTIREVATLAHDSSTQ 251
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKI 386
+ ++ + ++ + L ++I + S A++E ++ + T SE+
Sbjct: 252 TDDARSVAQSGQVKVENTLHSISNLSNEIQSASQAVEELDANAAQIDEVVTTINGISEQT 311
Query: 387 NRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
N + + G ++++ L + Q+ + + +RN Q +
Sbjct: 312 NLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQQATVEIQAMIESLQRNSQSL 367
>gi|254821569|ref|ZP_05226570.1| hypothetical protein MintA_16667 [Mycobacterium intracellulare ATCC
13950]
Length = 410
Score = 38.4 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 11/91 (12%), Positives = 29/91 (31%), Gaps = 4/91 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
G + +++ L + V+ G VG++ + ++ I
Sbjct: 36 GIGGGGYLLNAVFSNALN-LPAHAKVKLAGADVGQLEKM---VARNYTAVTTLRIMDGVR 91
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
+ +TA +R+ G ++ +
Sbjct: 92 IPVGSTAELRSATPLGDVFVAIKPPTPVDPN 122
>gi|160895804|ref|YP_001561386.1| rod shape-determining protein MreC [Delftia acidovorans SPH-1]
gi|160361388|gb|ABX33001.1| rod shape-determining protein MreC [Delftia acidovorans SPH-1]
Length = 356
Score = 38.4 bits (86), Expect = 2.6, Method: Composition-based stats.
Identities = 16/97 (16%), Positives = 29/97 (29%), Gaps = 7/97 (7%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVR-FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
++ G VDG+ S V G+ VG++ + YP + LI D +
Sbjct: 140 YTRRVVIDRGQVDGIDQGSPVLDEKGV-VGQVTRV-----YPLRAEVTLLIDRDQAIPVF 193
Query: 97 TTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQ 133
T G + + + +
Sbjct: 194 NPRTGARSVAYGDPSPLRTGGIELRFMPSNADVQEGD 230
>gi|311256981|ref|XP_003126899.1| PREDICTED: vacuolar fusion protein MON1 homolog B-like [Sus scrofa]
Length = 548
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 113 LSEAGKPIYSRYGSVEALSTTMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLV 172
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F++ D++ L+ + T D
Sbjct: 173 AVSRTPQSAAQLRGELLAVHAQIVSTLTRASVARIFARKQNYDLRRLLAGSERT---LDR 229
Query: 425 CLNNFERNPQDIVWG 439
L++ ER+P ++ G
Sbjct: 230 LLDSVERDPGALLLG 244
>gi|301788039|ref|XP_002929436.1| PREDICTED: vacuolar fusion protein MON1 homolog B-like [Ailuropoda
melanoleuca]
Length = 551
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 116 LSEAGKPIYSRYGSVEALSTTMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLV 175
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F++ D++ L+ + T D
Sbjct: 176 AVSRTPQSAAQLRGELLAVHAQIVSTLTRASVARIFARKQNYDLRRLLAGSERT---LDR 232
Query: 425 CLNNFERNPQDIVWG 439
L++ ER+P ++ G
Sbjct: 233 LLDSVERDPGALLLG 247
>gi|291547810|emb|CBL20918.1| hypothetical protein CK1_30730 [Ruminococcus sp. SR1/5]
Length = 553
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 43/422 (10%), Positives = 120/422 (28%), Gaps = 33/422 (7%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
+F + +F + W + EV+ SV L +GI V + +
Sbjct: 144 IFTSLGILGTFIGLVW--GLKNFQPTDYEVM---TSSVSAL-------VDGIKVAFLTSI 191
Query: 72 FLDQEYPNHSLAKALIRPDTPLYP-------STTATIRTQGLAGITYIELSTLRKEKKTI 124
+ ++ + ++ L + +K +
Sbjct: 192 ---YGVALSVVYTFGMKSGYSAMSQAMQDFLDRFHALVLPTAENESWNLLVSSQKTQTEA 248
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH-IQKIIENIEKPLTTTIANI 183
+ E+ M + I ++ ++ S Q I I + +
Sbjct: 249 MKQMAEQFSVQMADSFEKVITPTFQKMNDSLDVLTASVTKGQQDAIREILDTFLSEMHGS 308
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+ N+ K + S K + +++ T ++ +K +
Sbjct: 309 FQMQFEDFNDALAELKKVQKENTEYTSELYKTMSSQLSETFTKQERAMKDAIKEIDEMQS 368
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
++ + + D + + E ++ L ++ M+ + E
Sbjct: 369 SYMKTADRIIRDNQMIQQLQKQDYEKFARHMHENEKESADLWKTCNASMRQ-YVDSAAEG 427
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK 363
+ + R S +RE + + + +N + L+S+I +
Sbjct: 428 MKAVADSNRISEELLREDKKMIEDFEARVKEFTESQKMVNSVLDEVRRLLSEIKTAKNNR 487
Query: 364 ENNSLFKD-----AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
+ + + + + +D + + ++ L++I+ +R+ +
Sbjct: 488 DIHLIAGQPWGYGSNAGIQELKDKLTGLEDLL----EGQGARQEALLDEIERSIREATKA 543
Query: 419 VN 420
Sbjct: 544 AQ 545
>gi|281348265|gb|EFB23849.1| hypothetical protein PANDA_019612 [Ailuropoda melanoleuca]
Length = 550
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 116 LSEAGKPIYSRYGSVEALSTTMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLV 175
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F++ D++ L+ + T D
Sbjct: 176 AVSRTPQSAAQLRGELLAVHAQIVSTLTRASVARIFARKQNYDLRRLLAGSERT---LDR 232
Query: 425 CLNNFERNPQDIVWG 439
L++ ER+P ++ G
Sbjct: 233 LLDSVERDPGALLLG 247
>gi|241564326|ref|XP_002401880.1| CAP-Gly domain-containing linker protein, putative [Ixodes
scapularis]
gi|215501926|gb|EEC11420.1| CAP-Gly domain-containing linker protein, putative [Ixodes
scapularis]
Length = 1036
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 14/165 (8%), Positives = 43/165 (26%), Gaps = 4/165 (2%)
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ E + ++ + +E T ++ + +
Sbjct: 715 AQTSDRESQLASAQAELERLRAEFSAHREDLAKQLRENQEETLAVNRMHDQMKNQLGMVD 774
Query: 341 NLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTF----RDTSEKINRYIPSIGNN 396
+L + S ++ + + AQ + + I + N+
Sbjct: 775 DLRRLLAEAEGAKSDLSARVSQLQAELASATAQAIDRKADSNNEAEVKALKARIEELQNS 834
Query: 397 LQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGRE 441
+ ++ L + + + + + ER + GR
Sbjct: 835 TEEELRAELERTRGRAEEDKRKLGQLAKEMEQLERELERSRLGRS 879
>gi|73957368|ref|XP_546825.2| PREDICTED: similar to MON1 homolog B [Canis familiaris]
Length = 915
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 480 LSEAGKPIYSRYGSVEALSTTMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLV 539
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F++ D++ L+ + T D
Sbjct: 540 AVSRTPQSAAQLRGELLAVHAQIVSTLTRASVARIFARKQNYDLRRLLAGSERT---LDR 596
Query: 425 CLNNFERNPQDIVWG 439
L++ ER+P ++ G
Sbjct: 597 LLDSVERDPGALLLG 611
>gi|47208995|emb|CAF91401.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2819
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 30/296 (10%), Positives = 94/296 (31%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E+ +++ + + + ++ E M
Sbjct: 1371 QSYTQQMEDLKRQLEEEIKAKNALAHALQSARHDCDLLREQYEEEQEAKAELQRGMSKAN 1430
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + ++ K+ ++ N +
Sbjct: 1431 SEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEI 1490
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + +D +F K+ ++ + E+ ++ + + + S E+
Sbjct: 1491 EDLMVDVERSNAAAAALDKKQRNFD-KILAEWKQKYEESQSELEGSQKEARSLSTELFKL 1549
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + ++ ++L +I E + ++
Sbjct: 1550 KNSFEESLENLETMKRENKNLQEELSDLAEQI------VEGTKSIHELEKIRKQLEQEKS 1603
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
++ + +L++ L + + +++ + D+ + +RN Q IV
Sbjct: 1604 ELQTSLEEAEASLEHEEGKILRIQLEFNQIKAEIERKLGEKDEEMEQAKRNQQRIV 1659
>gi|220941688|emb|CAX15429.1| novel myosin family protein [Danio rerio]
Length = 1221
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 34/291 (11%), Positives = 88/291 (30%), Gaps = 10/291 (3%)
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
E ++I + + + ++ E M
Sbjct: 598 QQIEELKRQIEEEVKAKNALAHAVQSARHDCDLLREQFEEEQEAKAELQRGMSKANSEVA 657
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
T K A LQ+ + +E + + K+ ++ V D+
Sbjct: 658 QWRTKYETDAIQRTEELEESKKKLAQRLQEAEEQIEAVNSKCASLEKTKQRLQGEVEDLM 717
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ + +D +F ++ + E A+ + + S E+ +
Sbjct: 718 IDVERANSLAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSLSTELFKMKNSY 776
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
T++ +E + + Q+ ++L +I E + ++A T +I
Sbjct: 777 EETLDQLETLKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKTVETEKAEIQT 830
Query: 389 YIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L++ L ++ + ++ + D+ + +RN Q +
Sbjct: 831 ALEEAEGTLEHEESKILRVQLELNQVKGEIDRKLAEKDEEIEQIKRNSQRV 881
>gi|134045879|ref|YP_001097365.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C5]
gi|132663504|gb|ABO35150.1| methyl-accepting chemotaxis sensory transducer [Methanococcus
maripaludis C5]
Length = 732
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 50/388 (12%), Positives = 115/388 (29%), Gaps = 14/388 (3%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ + G+ V G VG IV + + T +
Sbjct: 158 YKVENVENALGMVVTYPVYEYGRIVGSIVIIDILNNNNGMVD-----ELKANTGDEATLS 212
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ Q + + + RNQ A+ T + A +
Sbjct: 213 LGKQRITTSLITDGKRPVGTSISDEVWNYVRNQNAVYKGTAVVLGTPYITAYAPLPDANG 272
Query: 161 S---SRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ + T I ++ I + K T
Sbjct: 273 DVIGMVFVGAPQTDAIAAKTDARNKIIMLALFGVLVAFLISTYSNRRITKSIEELKKGTD 332
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
K+ +L++++ + + N +K+ D + ++ T
Sbjct: 333 EFGNGNYEYQTKIKTGDELEELSDSFNGMAENVKNLMKTMDMDKVELANLLNNVTTVMNN 392
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
K D + + A +A+ ++ + +T Q QK+ + E
Sbjct: 393 VAKGDFTARADENTENNTLQKAINTAVANVAQLIKDLREEVDLLTIQVQKVEDELKGAEE 452
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+ + +++ + AE S + + L+E + ++ A D + + + I N
Sbjct: 453 TATQVTEAANQVAEASS--DQSAKLQEASDELENIYGAAKGAHDAAVETVKSAEEISEN- 509
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDC 425
S++G+ ++N + ++Q N D+
Sbjct: 510 ---SENGVKKVENAITRMQSITNVIDEL 534
>gi|806515|dbj|BAA09069.1| myosin heavy chain [Cyprinus carpio]
Length = 955
Score = 38.4 bits (86), Expect = 2.7, Method: Composition-based stats.
Identities = 32/296 (10%), Positives = 88/296 (29%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E + I + + + ++ E M
Sbjct: 327 QAYTQQIEELKRHIEEEVKAKNALAHAVQSARHDCDLLREQYEEEQEAKAELQRGMSKAN 386
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ V
Sbjct: 387 SEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEV 446
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E+ A+ + + S E+
Sbjct: 447 EDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEESQAELEGAQKEARSLSTELFKM 505
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L ++ E + ++A T
Sbjct: 506 KNSYEEALDHLETLKRENKNLQQEISDLTEQL------GETGKSIHELEKAKKTVESEKS 559
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 560 EIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEMEQIKRNSQRVI 615
>gi|288573914|ref|ZP_06392271.1| methyl-accepting chemotaxis sensory transducer [Dethiosulfovibrio
peptidovorans DSM 11002]
gi|288569655|gb|EFC91212.1| methyl-accepting chemotaxis sensory transducer [Dethiosulfovibrio
peptidovorans DSM 11002]
Length = 736
Score = 38.4 bits (86), Expect = 2.8, Method: Composition-based stats.
Identities = 29/399 (7%), Positives = 87/399 (21%), Gaps = 29/399 (7%)
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+V + +D + + G + + I
Sbjct: 215 VVPIEIDGTKVGAVGVDISVDSLNGINDEAKLYDTGFGRLMSAKGVVVAHPDHDRIGKPI 274
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
R + + + +I + A IE
Sbjct: 275 GETVGDRGAYFLKKIASGDSWFDEAWSVSLNDMVYKAFAPVIVGDTGTPWSFGAVIEKGE 334
Query: 188 TVLANNISHIDKMMHT---------TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ A++ ++ + + + +
Sbjct: 335 VMEASDRMLYFTLVIAAAGLVLVVGAVWLVAGRIVRPLRKISEMAARAQEGDLTMTREDF 394
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET- 297
+ I + +V + + + +++ L +S +++ ET
Sbjct: 395 GVDSEDEIGTVVDGLSAMVASQAESVAQIDMAAKAVSRISKELLELSGRTNSSVETVETG 454
Query: 298 -----SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
N A + S K +
Sbjct: 455 LAQTSELSESNSASIEETTAGIEEVASGAQTMAKSAADGATAGREAGETARSSVDKVEAV 514
Query: 353 MSKI--------NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + ++ A++E + +D + T +++ N + ++G
Sbjct: 515 VRDLSDVERQSAESVEAMEELGAAVRDIAGFVETITAIADQTNLLALNAAIEAARAGEAG 574
Query: 405 ------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+++ L + + E N + +
Sbjct: 575 RGFAVVAEEVRKLAEESNSAAGEVAKLMEGLEANSRQSI 613
>gi|311743970|ref|ZP_07717776.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
gi|311313100|gb|EFQ83011.1| virulence factor Mce family protein [Aeromicrobium marinum DSM
15272]
Length = 347
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 36/246 (14%), Positives = 67/246 (27%), Gaps = 4/246 (1%)
Query: 31 SNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S + ++ GL + V G+ VG +V + H + + D
Sbjct: 16 SGCVGPDSTTLTVQFTD-ATGLFRGNDVGVRGVGVGEVVSITPAG---GHVEVEIRVDGD 71
Query: 91 TPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISN 150
PL +A I + +A Y+EL+ I T R I +
Sbjct: 72 VPLPADVSALIVARSVATDRYVELTPAYSGGPKIGDGDTVPLDRTRTPVEFEEILGSVEQ 131
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ + + +I+ L I LA +S ++ M +
Sbjct: 132 VSSAMSGQGGEAGPLNRILSATAATLDGQGGLIAQSMGDLATLLSAVEGSMGDVEQNLAG 191
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
D D + + + I + + +V D RE
Sbjct: 192 LDELTAALADNDALVRRFTTEVTDATTMLAGQRDAIGATFDALAAMVREVAEFSRDHREQ 251
Query: 271 TQTFQE 276
+
Sbjct: 252 VSGQID 257
>gi|254821390|ref|ZP_05226391.1| LprK [Mycobacterium intracellulare ATCC 13950]
Length = 383
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 32/87 (36%), Gaps = 6/87 (6%)
Query: 38 MAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPST 97
V + +++G +S V + VG I + L + + T L +
Sbjct: 46 TIYVQVPDTLAING---NSKVMVADVFVGSIKAINL---KNWVATLTLGLDKHTKLPKNA 99
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTI 124
TA I L G ++EL++ +
Sbjct: 100 TAKIGQTSLLGSQHVELASPPNPSPEL 126
>gi|227530403|ref|ZP_03960452.1| RND superfamily resistance-nodulation-cell division:proton (H+)
antiporter [Lactobacillus vaginalis ATCC 49540]
gi|227349678|gb|EEJ39969.1| RND superfamily resistance-nodulation-cell division:proton (H+)
antiporter [Lactobacillus vaginalis ATCC 49540]
Length = 869
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 40/340 (11%), Positives = 97/340 (28%), Gaps = 4/340 (1%)
Query: 86 LIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGIN 145
+ P+ R I+ ++ Q +Q SG+
Sbjct: 265 EVPNSNPIKKGYLIAQRDFSKGKISPTTINIKLNHPLNNQQDLAAIDQITNAVKKNSGVK 324
Query: 146 YFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQ 205
+S + T + ++ Q + T A+N +
Sbjct: 325 SVMSVTQPTGRPLNQLYVKNQLKTVLTGLQQSQTGLTTIKNGLQNASNQLASANIKEQLA 384
Query: 206 VTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVH 265
+D + + A Q + + + + ++
Sbjct: 385 QVQQLADGSQRLADASGQFNTGLNQYVAGTNQYLAGTNQLASGI-GQLQVGINPFASGIN 443
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
V +Q + + + + SS M S T ++ + A+ I Q
Sbjct: 444 QVTSASQKLNQSVTEANQQIQQLSSLMNSHSTGSYFAMASQLNQGTSQLAGALTTINQQV 503
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK 385
+ IN + N +S L + + +++ S ++ N + +
Sbjct: 504 PTLSQGINQLTNGSSELTHTGNQLKTAGNQL--TSGGQQLNGGINQVNGGVQQLNHQLQA 561
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
++ + + L SGL+ +QN + ++Q ++ +
Sbjct: 562 MSSQLNQLEAGLNQAV-SGLDKVQNGISEVQSYLSELKNS 600
>gi|218709387|ref|YP_002417008.1| methyl-accepting chemotaxis protein [Vibrio splendidus LGP32]
gi|218322406|emb|CAV18559.1| Methyl-accepting chemotaxis protein [Vibrio splendidus LGP32]
Length = 467
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 39/338 (11%), Positives = 104/338 (30%), Gaps = 5/338 (1%)
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
I T L L+ L +++ + + E Q N + + +S
Sbjct: 34 VILTLVLDSAADSLLAHLYQDELLLMKGLIEAGQLTKDQVAQLVSNSDTISLGYGAGSVS 93
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + + + + +I V I+ + T S +K
Sbjct: 94 VMNGAFSLVASHDQNLWSALSTTQVSIIAVTLTLIALGVYYIMTFIGGAMFSMNKALSTL 153
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ +T +M + + ++I I + + +V +++ + + Q
Sbjct: 154 ASGDLTC--RMNYFLVRDEFSEIAITIDKVAEREQNMVLSIQESVALMQQISSDLNQSTQ 211
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ + S+ + + SA + A + + + D R S + N
Sbjct: 212 QSSDISSN-QQEHLNSLASATEQMAATIREVATLAHDSSTQTMDARGVAQSGQVKVSNTL 270
Query: 340 SNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+++ SQ+ + + A + + + + G +
Sbjct: 271 ESISSLSQEIQSASQAVEELDANAAQIDEVVATINGISEQTNLLALNAAIEAARAGEQGR 330
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F+ ++++ L + Q+ + + +RN Q +
Sbjct: 331 GFA-VVADEVRALAGRTQQATVEIQSMIESLQRNSQSL 367
>gi|194208821|ref|XP_001916363.1| PREDICTED: similar to Vacuolar fusion protein MON1 homolog B (HSV-I
stimulating-related protein) (HSV-1 stimulation-related
gene 1 protein) [Equus caballus]
Length = 522
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 50/135 (37%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 86 LSEAGKPIYSRYGSVEALSTTMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLV 145
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F++ D++ L+ + T D
Sbjct: 146 AVSRTPQSASQLRGELLAVHAQIVSTLTRASVARIFARKQNYDLRRLLAGSERT---LDR 202
Query: 425 CLNNFERNPQDIVWG 439
L++ ER+P ++ G
Sbjct: 203 LLDSMERDPGALLLG 217
>gi|326429791|gb|EGD75361.1| hypothetical protein PTSG_06438 [Salpingoeca sp. ATCC 50818]
Length = 2620
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 10/204 (4%), Positives = 57/204 (27%), Gaps = 8/204 (3%)
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
+ + + + + ++ ++ QE I L ++
Sbjct: 2210 EKELHTSASDTRAREEQLRRDLAAKTMELDVLKGTAAAIEESLQEAHSTISGLRTENLQL 2269
Query: 292 MKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAE 351
+ + + + + + ++ + ++ + +++
Sbjct: 2270 HEKLNSEGGSPKQTAKLKEVMAKHNQEKAKYRS--QLDAMKKKVKEAEARQRGDTKRLQG 2327
Query: 352 LMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
++++ A +E + + + +++ + + + + +
Sbjct: 2328 ELTRLQKALADEEGRA--AQLEEKARELQQERDELQSRVHKLETDASTLTA----QAKEA 2381
Query: 412 VRKLQETVNHFDDCLNNFERNPQD 435
Q T + + + +R+ Q
Sbjct: 2382 ADVQQRTEAAMNTSIGSLDRDLQA 2405
>gi|86148748|ref|ZP_01067021.1| putative methyl-accepting chemotaxis protein [Vibrio sp. MED222]
gi|85833463|gb|EAQ51648.1| putative methyl-accepting chemotaxis protein [Vibrio sp. MED222]
Length = 467
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 39/338 (11%), Positives = 104/338 (30%), Gaps = 5/338 (1%)
Query: 100 TIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKIS 159
I T L L+ L +++ + + E Q N + + +S
Sbjct: 34 VILTLVLDSAADSLLAHLYQDELLLMKGLIEAGQLTKDQVAQLVSNSDTISLGYGAASVS 93
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + + + + +I V I+ + T S +K
Sbjct: 94 VMNGAFSLVASHDQNLWSALSTTQVSIIAVTLTLIALGVYYIMTFIGGAMFSMNKALSTL 153
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
+ +T +M + + ++I I + + +V +++ + + Q
Sbjct: 154 ASGDLTC--RMNYFLVRDEFSEIAITIDKVAEREQNMVLSIQESVALMQQISSDLNQSTQ 211
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ + S+ + + SA + A + + + D R S + N
Sbjct: 212 QSSDISSN-QQEHLNSLASATEQMAATIREVATLAHDSSTQTMDARGVAQSGQVKVSNTL 270
Query: 340 SNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ 398
+++ SQ+ + + A + + + + G +
Sbjct: 271 ESISSLSQEIQSASQAVEELDANAAQIDEVVATINGISEQTNLLALNAAIEAARAGEQGR 330
Query: 399 NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F+ ++++ L + Q+ + + +RN Q +
Sbjct: 331 GFA-VVADEVRALAGRTQQATVEIQSMIESLQRNSQSL 367
>gi|260185036|ref|ZP_05762510.1| putative MCE-family lipoprotein mce1E [Mycobacterium tuberculosis
CPHL_A]
gi|289445704|ref|ZP_06435448.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis CPHL_A]
gi|289418662|gb|EFD15863.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis CPHL_A]
Length = 390
Score = 38.0 bits (85), Expect = 2.9, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 9/105 (8%)
Query: 38 MAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ +++P + ++G +S V + VG I + L + ++ D L
Sbjct: 51 SYTIYVQMPDTLAING---NSRVMVADVWVGSIRAIRL---KNWVATLTLSLKKDVTLPK 104
Query: 96 STTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQRAMITA 139
+ TA I L G ++E + + T +R+
Sbjct: 105 NATAKIGQTSLLGSQHVELAAPPDPSPVPLKDGDTIPLKRSSAYP 149
>gi|242876562|gb|ACS94030.1| recombination protein [Pasteurellaceae bacterium JF4136]
Length = 439
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 77/230 (33%), Gaps = 12/230 (5%)
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
T + + D + +++ + Q + + + +Q
Sbjct: 60 RWLTDHELQDQDNPEECILRRLVNQDGRSKAFINNTPVSASQLKEFGQYLVHINGQHASQ 119
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ ++ L + + ++ N + S +++ E ++Q + +
Sbjct: 120 LLLKNDFQLQALDNFCAHNHLLEQMKTDYLNWKELQSQVKTFNQKCVENEAKKQLLQYQV 179
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
N ++ N+ EL + +S ++ L + + + + + ++ +
Sbjct: 180 NELDEFNLRPNEY----QELEEEQRRLSNSEQLTQLSQSVLQIL--IENETVNVDSLLYR 233
Query: 393 IGNNLQNFSQSGLN--DIQNLVRKL----QETVNHFDDCLNNFERNPQDI 436
+L++ ++ D Q L+++ QE + N E +PQ +
Sbjct: 234 TTQHLEDLAELDTRYVDAQALLQEALIQVQEAASEIQHLSANIEEDPQVL 283
>gi|242799042|ref|XP_002483293.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
gi|218716638|gb|EED16059.1| conserved hypothetical protein [Talaromyces stipitatus ATCC 10500]
Length = 1390
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 22/300 (7%), Positives = 78/300 (26%), Gaps = 7/300 (2%)
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
+ + E+ S + + + +
Sbjct: 803 TNLFEEIRTEDETAANERYNEREKELLDEQEALKSAWEEKHRGLEEVHANMKTEHEAAIG 862
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
K+ T K + E+++ + ++ + ++ +
Sbjct: 863 EKHAELERTLAELEAAKNDLQTVRDSLVSKSEDLETKEKELETTKTELETKLQEIHKAQD 922
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT----DQRQKI 328
+++ ++ S ++ + A + +
Sbjct: 923 DLHYKQEELQATQAELQSTLEELVVKKAELEGKHTELEEAHKRHAEEKGQLIGSHFTELD 982
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM--HTFRDTSEKI 386
+T+ EL ++ ++ E A+++M + +++
Sbjct: 983 NLRDMHSTELTNLRTTHEANAKELQDRLEKLAKDFEEKERTWAAEKSMLQRQLHEKLDEL 1042
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
I + L+ +Q V +++ T+++ ++ + Q + + S K
Sbjct: 1043 AG-IEREKDALERDDVIREKHLQAAVEEMRRTIDNMENDREKLRKTLQSLGEATDLKSSK 1101
>gi|39937697|ref|NP_949973.1| methyl-accepting chemotaxis receptor/sensory transducer
[Rhodopseudomonas palustris CGA009]
gi|39651556|emb|CAE30079.1| methyl-accepting chemotaxis receptor/sensory transducer
[Rhodopseudomonas palustris CGA009]
Length = 564
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 19/202 (9%), Positives = 51/202 (25%), Gaps = 6/202 (2%)
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
E + S + + +D + + E + H + ++ T A
Sbjct: 349 SATEEMTSSITEISRQVQESARIANDAVDQARRTNESVSDLSHAAARIGDVVELINTIAG 408
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
N+ + + ++ + + + S + ++
Sbjct: 409 QTNLLALNATIEAARAGEAGRGFAVVAAEVKALAEQTAKATGEISQHITGIQTATGQSVD 468
Query: 361 ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN------DIQNLVRK 414
A+KE T E+ I N+Q + D+Q +
Sbjct: 469 AIKEIGQTIGRMSEIASTIASAVEEQGAATQEISRNVQQAAHGTQQVSSNITDVQRGATE 528
Query: 415 LQETVNHFDDCLNNFERNPQDI 436
+ + ++ +
Sbjct: 529 TGSASSQVLSAAQSLSQDSNRL 550
>gi|126651024|ref|ZP_01723235.1| methyl-accepting chemotaxis protein [Bacillus sp. B14905]
gi|126592225|gb|EAZ86274.1| methyl-accepting chemotaxis protein [Bacillus sp. B14905]
Length = 430
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 23/210 (10%), Positives = 75/210 (35%), Gaps = 21/210 (10%)
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
E++Q S+ + + T + +++D S ++ ++ ++ +
Sbjct: 238 AESMQKVSSEGYAKIVSINEQTGKIHHKTFEMANMVEQLDESSSKINAVVEMVKSISGQT 297
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
N+ S + ++ + + N + + S ++ A+L+ N I
Sbjct: 298 NLLALNSAIEAARAGEHG-----KGFAVVANEVRKLADQTKSSVEQIADLIQMSNGI--T 350
Query: 363 KENNSLFKDAQRAMH-TFRDTSEKI---NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQET 418
+ +D Q ++ + + +E + + S+ +++ NF ++ + L
Sbjct: 351 TQVVQAIQDIQELVNNSIKQNAESLKAFDAISTSVEDSISNF-----QNVGKQISDLANI 405
Query: 419 VNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
+ + + ER + +++ +
Sbjct: 406 IETIGESSDELERVANRL-----NTTIREF 430
>gi|312960833|ref|ZP_07775338.1| sensor histidine kinase/response regulator [Pseudomonas fluorescens
WH6]
gi|311284491|gb|EFQ63067.1| sensor histidine kinase/response regulator [Pseudomonas fluorescens
WH6]
Length = 1165
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 49/156 (31%), Gaps = 2/156 (1%)
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
++ L + S E + + + + + + + ++ ++ + + I
Sbjct: 372 DVELLELIAGNIGTSIEAARYRQRLQEVLAETQQLNEELQVQQEELKTANEELEEQSRIL 431
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ + + N A E + + AM + + + LQ
Sbjct: 432 KESQAHLETQQAELEQTNEQLA--EQTQTLAEQRDAMDRKNGELNQAQQELEDRAEELQR 489
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
S+ + N+ +L+ +N NPQ+
Sbjct: 490 SSKYKSEFLANMSHELRTPLNSSLILAKLLAENPQE 525
>gi|257095134|ref|YP_003168775.1| methyl-accepting chemotaxis sensory transducer [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047658|gb|ACV36846.1| methyl-accepting chemotaxis sensory transducer [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 721
Score = 38.0 bits (85), Expect = 3.0, Method: Composition-based stats.
Identities = 53/397 (13%), Positives = 112/397 (28%), Gaps = 21/397 (5%)
Query: 45 IPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQ 104
++ GL+ S V RI D + + +T TA
Sbjct: 257 FRDTLKGLTKGSDVL-------RIAATT-DPDTRQKL-----VELETRFAEYRTAVGGIL 303
Query: 105 GLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRH 164
G I + ++ +Q A T + ++
Sbjct: 304 GNMQRLVIAKQAGSQIFHDSEELLEVTDQLAQAYQTGALKRTAYGIVLVVLILLAIGLLF 363
Query: 165 IQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI 224
+ E T A +T N + + ++ + T+++ I
Sbjct: 364 LLARTYLAESQRQTEEAEQSRQATESLNRQNQGAILRLMNELGDLADGDLTVTATVSEDI 423
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH- 283
T ++++ ++ I +++ ++ T ++ + +
Sbjct: 424 TGAIADSINYTIEELRVLVGRINDAASRVTVATGMAQQTSTELLAAAERQATEIKATGQS 483
Query: 284 -LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
L S S + S + A+ KI I L
Sbjct: 484 VLAMATSMTNVSADAKQSSTVARQSLAAADKGAQAVEASIKGMNKIREQIQETSKRIKRL 543
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+SSQ+ E++ I++I+ +L Q A + + + L S
Sbjct: 544 GESSQEIGEIVELISDITEQTNVLALNAAIQAASA---GEAGRGFTVVAEEVQRLAERSG 600
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
I +VR +Q D ++ E + + +V G
Sbjct: 601 EATKQIGAIVRTIQ---TDTQDTVSAMEESTRGVVEG 634
>gi|156974650|ref|YP_001445557.1| hypothetical protein VIBHAR_02368 [Vibrio harveyi ATCC BAA-1116]
gi|156526244|gb|ABU71330.1| hypothetical protein VIBHAR_02368 [Vibrio harveyi ATCC BAA-1116]
Length = 472
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 24/236 (10%), Positives = 76/236 (32%), Gaps = 8/236 (3%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + ++ + + K +D+ V +
Sbjct: 138 YYIMTFIGGAMFTMNKALNTLADGDLTARMNFFRVRDEFSEIAITIDKVADREQKMVQSI 197
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+E+ Q++ +++ L SS++ + + + + + D +
Sbjct: 198 QESVALMQQISSELN-LSIQNSSEISNTQQEHLNSLASATEQMASTIREVATLAHDSSTQ 256
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKI 386
+ ++ + ++ + L ++I + S A++E ++ + T SE+
Sbjct: 257 TDDARSVAQSGQVKVENTLHSISNLSTEIQSASQAVEELDANAAQIDEVVTTINGISEQT 316
Query: 387 NRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
N + + G ++++ L + Q+ + +RN Q +
Sbjct: 317 NLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQQATVEIQAMIEALQRNSQSL 372
>gi|120401978|ref|YP_951807.1| hypothetical protein Mvan_0963 [Mycobacterium vanbaalenii PYR-1]
gi|119954796|gb|ABM11801.1| Mammalian cell entry related domain protein [Mycobacterium
vanbaalenii PYR-1]
Length = 406
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 17/131 (12%), Positives = 35/131 (26%), Gaps = 19/131 (14%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQY-------DGPMAEVIIRIPGSVDGLS 53
M + GL + + S + + L+
Sbjct: 1 MAIRAK----GLMALLVTTSLSVSACATEGLASLPLPAPSGGSGGYTLTAVFSNA---LN 53
Query: 54 TD--SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+ V+ G VG + + ++ IR L +TA +R+ G +
Sbjct: 54 VPMMAKVKLAGADVGELESMQ---ARDYTAVTTLRIREGVQLPKGSTAELRSATPLGDVF 110
Query: 112 IELSTLRKEKK 122
I + +
Sbjct: 111 IAIKPPPSVQP 121
>gi|217325397|ref|ZP_03441481.1| paraquat-inducible protein B [Escherichia coli O157:H7 str.
TW14588]
gi|217321618|gb|EEC30042.1| paraquat-inducible protein B [Escherichia coli O157:H7 str.
TW14588]
Length = 270
Score = 38.0 bits (85), Expect = 3.1, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 11/31 (35%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPN 79
LS V F G VG + D + N
Sbjct: 167 AGQLSPGDPVLFRGYRVGSVETSTFDTQKRN 197
>gi|145633368|ref|ZP_01789098.1| DNA repair protein RecN [Haemophilus influenzae 3655]
gi|145635255|ref|ZP_01790959.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Haemophilus
influenzae PittAA]
gi|229845408|ref|ZP_04465539.1| DNA repair protein RecN [Haemophilus influenzae 6P18H1]
gi|144985931|gb|EDJ92533.1| DNA repair protein RecN [Haemophilus influenzae 3655]
gi|145267534|gb|EDK07534.1| tRNA delta(2)-isopentenylpyrophosphate transferase [Haemophilus
influenzae PittAA]
gi|229811716|gb|EEP47414.1| DNA repair protein RecN [Haemophilus influenzae 6P18H1]
Length = 558
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 77/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ + N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFSLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|156974633|ref|YP_001445540.1| hypothetical protein VIBHAR_02351 [Vibrio harveyi ATCC BAA-1116]
gi|156526227|gb|ABU71313.1| hypothetical protein VIBHAR_02351 [Vibrio harveyi ATCC BAA-1116]
Length = 884
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 28/89 (31%), Gaps = 8/89 (8%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + V I GL +++R+ G+ VG + + L
Sbjct: 29 ILTMVLAGWLVMK-----SIHDAGQRVQIYFSD-AAGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLGSIYVDADIYPEAAKLLNDKTRFWL 111
>gi|150020052|ref|YP_001305406.1| methyl-accepting chemotaxis sensory transducer [Thermosipho
melanesiensis BI429]
gi|149792573|gb|ABR30021.1| methyl-accepting chemotaxis sensory transducer [Thermosipho
melanesiensis BI429]
Length = 537
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 39/440 (8%), Positives = 128/440 (29%), Gaps = 29/440 (6%)
Query: 1 MESKNYYTSVG--LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSV 58
M+S +G + + L S F + +++ + G + + + ++ L +S
Sbjct: 1 MKSVFSKVLIGFSIVMFLTLIVSLFLLVQINKISDLVGFTKQFNVYLS-NLGLLFRES-- 57
Query: 59 RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLR 118
+ +D + + D E
Sbjct: 58 -----------EILVDYKDYARLK---KVGSDLEELRDKVVAYTESIKISSVGQENVNNL 103
Query: 119 KEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTT 178
+ E++ + + I + + + +
Sbjct: 104 VSNMEKISVFLEKSSTSSNFTKLENLIKKGRTLTEDLLNILSEIQIKNIKNLKVSFLVAS 163
Query: 179 TIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQK 238
+ + T+S + + + + S+ + +
Sbjct: 164 ILVVVLTLSISFVVARILVRPIKKVNMLVENLSNGVLNIEIEKIKSNDEIGNMAKSVERL 223
Query: 239 VNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETS 298
+ E + V + + K S E + + + + +D + + + S
Sbjct: 224 REILKETLLVINESSSKLSVTSEEMFASGEELSASVNSIAEVLDEISKE--AMSNSAVVE 281
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
++ + +S + + + + + + +KI ++ S + ++ + +SK++
Sbjct: 282 EMNASLEELSSASQGNANTAQAMLESSEKITEHLSLNTKNLSEVLENIENTKYSVSKMSE 341
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG------LNDIQNLV 412
+ E + K+ ++ + T +++ N + ++G ++I+ L
Sbjct: 342 VMK--ELSEYSKNIEQILETITSIADQTNLLALNAAIEAARAGEAGKGFAVVADEIRKLA 399
Query: 413 RKLQETVNHFDDCLNNFERN 432
+ + L + +N
Sbjct: 400 EESRNATESIGKILTSIGKN 419
>gi|145639641|ref|ZP_01795244.1| DNA repair protein [Haemophilus influenzae PittII]
gi|145271198|gb|EDK11112.1| DNA repair protein [Haemophilus influenzae PittII]
gi|309750611|gb|ADO80595.1| DNA repair protein RecN [Haemophilus influenzae R2866]
Length = 558
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFATHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|291230438|ref|XP_002735223.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 2454
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 29/280 (10%), Positives = 78/280 (27%), Gaps = 3/280 (1%)
Query: 160 DSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNT 219
+ + E + + + + + + ++ T + N
Sbjct: 82 QINTMSTQYREMLLEKENEIKQLKQKHHAMQDFHDTMLNATSLNTSTSTSMLTPSNVGVD 141
Query: 220 ITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQ 279
D + + L Q ++ S T +
Sbjct: 142 DEDFQDVISSQYQINKLSHQLQRVQVECEHWKQLSNSQTTQQTTFQMGGTDISLNSDEIT 201
Query: 280 KIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENIT 339
+ + D ++ ++ E + + A + + I +E+
Sbjct: 202 MLKSQVKDLEKRLANEIDEHQHELTTLQDVHSQKMSMATKRHKQDLEDYQMRIEELESQL 261
Query: 340 SNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
+ ++ S+ + L+ + ++ + E IN+ + QN
Sbjct: 262 YSGDEVSEPNDSPRRNFEELRKLRSKKNELENVVEQVERRVSQLESINQQLKKELKASQN 321
Query: 400 FSQSG---LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L D+Q ++ L+E N + N E++ Q +
Sbjct: 322 GVKEKEACLVDVQQQIKDLKEQYNAVLEDGQNLEQDKQKL 361
>gi|119619472|gb|EAW99066.1| dystrophin (muscular dystrophy, Duchenne and Becker types), isoform
CRA_f [Homo sapiens]
Length = 3685
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1034 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1093
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1094 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1153
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1154 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1210
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1211 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1270
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1271 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1323
>gi|57160749|emb|CAI39566.1| dystrophin [Homo sapiens]
gi|57208229|emb|CAI42229.1| dystrophin [Homo sapiens]
gi|57208477|emb|CAI42950.1| dystrophin [Homo sapiens]
gi|57208496|emb|CAI42225.1| dystrophin [Homo sapiens]
gi|57208794|emb|CAI42991.1| dystrophin [Homo sapiens]
gi|57284025|emb|CAI43058.1| dystrophin [Homo sapiens]
gi|94963113|gb|AAI11588.1| DMD protein [synthetic construct]
gi|108752158|gb|AAI11837.1| DMD protein [synthetic construct]
gi|108752180|gb|AAI11935.1| DMD protein [synthetic construct]
gi|109073219|gb|AAI18003.1| DMD protein [synthetic construct]
Length = 3685
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1034 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1093
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1094 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1153
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1154 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1210
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1211 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1270
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1271 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1323
>gi|181857|gb|AAA53189.1| dystrophin [Homo sapiens]
gi|158323700|gb|ABW34380.1| dystrophin [Shuttle vector phcAd.DYS-FL]
Length = 3685
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1034 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1093
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1094 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1153
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1154 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1210
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1211 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1270
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1271 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1323
>gi|313104240|sp|P11532|DMD_HUMAN RecName: Full=Dystrophin
Length = 3685
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1034 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1093
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1094 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1153
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1154 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1210
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1211 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1270
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1271 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1323
>gi|5032283|ref|NP_003997.1| dystrophin Dp427m isoform [Homo sapiens]
Length = 3685
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1034 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1093
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1094 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1153
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1154 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1210
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1211 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1270
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1271 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1323
>gi|119619468|gb|EAW99062.1| dystrophin (muscular dystrophy, Duchenne and Becker types), isoform
CRA_b [Homo sapiens]
Length = 3672
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1034 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1093
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1094 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1153
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1154 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1210
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1211 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1270
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1271 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1323
>gi|71278821|ref|YP_267048.1| PqiB family protein [Colwellia psychrerythraea 34H]
gi|71144561|gb|AAZ25034.1| PqiB family protein [Colwellia psychrerythraea 34H]
Length = 1035
Score = 38.0 bits (85), Expect = 3.2, Method: Composition-based stats.
Identities = 6/40 (15%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 53 STDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ S++ + GI +G++ + L++ I +
Sbjct: 659 TPGSAISYRGITIGQVDNVSLNKIDDE-IKVNITIDEEHR 697
>gi|148222862|ref|NP_001085151.1| myosin, heavy polypeptide 15 [Xenopus laevis]
gi|59544096|gb|AAW88309.1| ventricular myosin heavy chain [Xenopus laevis]
Length = 1937
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 26/287 (9%), Positives = 86/287 (29%), Gaps = 13/287 (4%)
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
Q+I + ++ T A + + + ++ + + +
Sbjct: 1310 FTQQIEDLRKQLDEETKAKNALAHALQSARHDCDLLREQFDEEQEAKAELQRSLSKGNAE 1369
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + +Q+ ++ E + + ++ + V +T + +++
Sbjct: 1370 VAMWRNKYETDAIQRTEELEEAKKKLAARLQEAEEAVEAANAKCASLEKTKHRLQSELED 1429
Query: 284 LLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI----ENI 338
++ D S + N ++ + + + QK +++T +N
Sbjct: 1430 MMIDLERSNAAAAAMDKKQRNFDKIIADWKQKYEEAQAELESSQKEARSLSTELFKLKNA 1489
Query: 339 TSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ D + + + + E N + ++ ++ +
Sbjct: 1490 YEEVLDILETVKRENKNLQEEISDLTDQISEGNKSLHEIEKVKKQVEQEKSEVQVALEEA 1549
Query: 394 GNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
L++ L ++ + + + D+ N RN Q I+
Sbjct: 1550 EGALEHEESKTLRFQLELAQIKAEFDRKLAEKDEETENVRRNLQRII 1596
>gi|261252917|ref|ZP_05945490.1| methyl-accepting chemotaxis protein [Vibrio orientalis CIP 102891]
gi|260936308|gb|EEX92297.1| methyl-accepting chemotaxis protein [Vibrio orientalis CIP 102891]
Length = 467
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 23/236 (9%), Positives = 70/236 (29%), Gaps = 8/236 (3%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + S ++ + + + +++ N V +
Sbjct: 133 YYIMTFIGGAMFTMNKALSTLASGDLTSRMNFFKVRDEFSEIAITIDQVAEREQNLVISI 192
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+E+ Q++ ++ S+ + + + + + D +
Sbjct: 193 QESIALMQQISSDLNQSNIQ-SADVSGTQQEHLNSLASATEQMASTIREVANLAHDSSTQ 251
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKI 386
+ + + ++L S+I + S A+ E ++ + T SE+
Sbjct: 252 TEDARSVATQGQKKVGHTLNSISQLSSEIRSASEAVAELDANAAQIDEVVTTINGISEQT 311
Query: 387 NRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
N + + G ++++ L + Q+ + +RN Q +
Sbjct: 312 NLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQQATVEIQTMIEALQRNSQSL 367
>gi|300870952|ref|YP_003785823.1| methyl-accepting chemotaxis sensory transducer [Brachyspira
pilosicoli 95/1000]
gi|300688651|gb|ADK31322.1| methyl-accepting chemotaxis sensory transducer [Brachyspira
pilosicoli 95/1000]
Length = 933
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 49/457 (10%), Positives = 121/457 (26%), Gaps = 68/457 (14%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRF 60
M YT + +FV+S + FF S
Sbjct: 299 MNRAIVYTIIMVFVISAIIIGFFIKLIFSSLT---------------------------- 330
Query: 61 NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
RI + D + + ++ + + +
Sbjct: 331 ------RISDIVGDSIDNK--------DLSVDIPELSGGDEVSEITRWMGILSGNFQATI 376
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
I+ + Q T S + I+N + + I + +E +E +
Sbjct: 377 ANIKKIISISKKQSDRFTNQISSNSDIINNINESIENIKTNINEELNNLEIVENSNKNIL 436
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
I+ S + ++ S + + I +
Sbjct: 437 EYIDINSNSIDEIDRDTKELQEKIIKEGDSIEQISVSVEQMSKTIEGIDNIIF----NAS 492
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD-----FSSKMKSK 295
+++ ++S + D+R I ++ ++ +++
Sbjct: 493 NKAKDLHIASMKSKEKMQATSTATSDLRNALGFISNFVSSIRNIAHQTNLLAMNAAIEAA 552
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI--------NTIENITSNLNDSSQ 347
+ A +R E D KI+ +I N + T+ + ++
Sbjct: 553 HAGKYSSGFAVVAEEIRKLSEVSNEQADNANKILQSIEEKIIVTSNDLTESTTQFDILAR 612
Query: 348 KFAELMS--------KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
E+ + + A+ E + + + + + I NN+
Sbjct: 613 DVQEVTEIMGSVHNSSVEQLKAINEIVNSITTISTSSDNIKKQYINVASKLGDIKNNINT 672
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ ++ + KL+ T N + ++ N ++
Sbjct: 673 LNTLSVS-ASKSMAKLRTTSNAIYENIDKIYSNSNEL 708
>gi|224368426|ref|YP_002602589.1| hypothetical protein HRM2_13140 [Desulfobacterium autotrophicum
HRM2]
gi|223691142|gb|ACN14425.1| conserved hypothetical protein [Desulfobacterium autotrophicum
HRM2]
Length = 582
Score = 38.0 bits (85), Expect = 3.3, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 45/151 (29%), Gaps = 8/151 (5%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKA-LIRPDTPLYPSTTATIRTQGLA 107
GL NG+ +G + L D + + + + ++ P+ + +
Sbjct: 367 AAGLVPG----VNGLQIGVVTQLSEDPDGEDRVMVRMPMVDPEA---EGIWCRVASLDAG 419
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
++ + I + ++ S A + + + +R K
Sbjct: 420 ENRGAFFRPEINDEVVLGFINDDPRDPVILGMLNSSAKPAPITASDDNHEKGFVTREGLK 479
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHID 198
I N EK T + + + + +
Sbjct: 480 FIFNDEKRSITCETPNGNMMVLSDDEGTIVM 510
>gi|192359385|ref|YP_001981808.1| putative lipoprotein [Cellvibrio japonicus Ueda107]
gi|190685550|gb|ACE83228.1| putative lipoprotein [Cellvibrio japonicus Ueda107]
Length = 508
Score = 38.0 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 28/309 (9%), Positives = 78/309 (25%), Gaps = 17/309 (5%)
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
+ + H + I + + ++
Sbjct: 183 VYDTRVVYGSWWWPDYPPVYWHYPSNYVYVSGFYWGPRVYIGSSFFFSGCHWRDRRVVVI 242
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
H + + + + + + S+ ++S
Sbjct: 243 DRHYHSHRFYNNRSIVHYRNSRHWHHNPVHRRGVAYYDNHTRERFHSAREPYQASRVYRT 302
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREIT 322
+ + + + + +
Sbjct: 303 QYAQPTTGQRPHDNLNRPLTRPTDSLRAGSSPT---------QPGGDRVSGGGRVQNGQA 353
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT 382
+ Q+ +N +E + +N+S+Q++ + NN N+ + A +
Sbjct: 354 TETQRHAPNVNRVEQLRERMNNSAQQWRD-----NNPQRQVNRNNSASERAPAEQRLQRE 408
Query: 383 S--EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGR 440
S E +I ++ S DIQ ++++ T + ER P+ I +
Sbjct: 409 SNRETTTYRTGNITPTPRDNSSGYRRDIQQ-PQRIERTQERVEREQPRIERTPERIDRSQ 467
Query: 441 EKGSVKIYK 449
++ + Y+
Sbjct: 468 QQRVERTYQ 476
>gi|119619469|gb|EAW99063.1| dystrophin (muscular dystrophy, Duchenne and Becker types), isoform
CRA_c [Homo sapiens]
Length = 3562
Score = 38.0 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 911 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 970
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 971 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1030
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1031 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1087
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1088 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1147
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1148 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1200
>gi|69951585|gb|AAZ04269.1| hypothetical protein ORF301 [Cotesia plutellae polydnavirus]
Length = 1376
Score = 38.0 bits (85), Expect = 3.4, Method: Composition-based stats.
Identities = 35/402 (8%), Positives = 99/402 (24%), Gaps = 25/402 (6%)
Query: 52 LSTDSSVRFNGIPVGRIVGLF-LDQEYPNHSLAKALIR----PDTPLYPSTTATIRTQGL 106
L ++ GI VG + L + A I P
Sbjct: 428 LDIGMTLSRGGIKVGVVTKLRNIVDVIEKKVGATVKIDYVQNPMIRRRDDNRRAFYVVEF 487
Query: 107 AGITYIELSTL--RKEKKTIFQIATE----------------RNQRAMITATPSGINYFI 148
+ + + I + ATE R++ +++
Sbjct: 488 IELPFEGIDDYVCVPCTWMIVRKATEQNSVVAYPKREDPFVTRDRVKSKERCNDDWGFYV 547
Query: 149 SNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTP 208
+ + + + ++ + + + S A +
Sbjct: 548 ATVKYETGEFKSMYSLTGRVYHLRSIYGSRSSQKLRENSHRDAEDWIARINNYGPFVEEG 607
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
++ + + ++ + + L I + V+ + Q+ +
Sbjct: 608 LNTTDTEPKFPLNKKLRIANRSHSSKLNDNSRKPLPRISIKRPALVEPNKQLDGKRMKLD 667
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ Q+ V + + A + + S R ++ +
Sbjct: 668 DVAQSSSAVVTDANTEPGSSRQEQSIIAQDNQPMESAQTETTASDSNGTARSSQQNKENL 727
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
++ E S++ L+ + + +A+ F E I
Sbjct: 728 QQSLPIQEQQQSSIPSIDVNTPILVIDDDEGVRPTSIKEQRLPSNQAISQFTKQPESIRE 787
Query: 389 --YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ + + + + N+ R L + + ++
Sbjct: 788 PQIVAAPSIEINQNTDEKQIRLVNIERNLDIAAQNQSNLMDQ 829
>gi|5032281|ref|NP_000100.2| dystrophin Dp427c isoform [Homo sapiens]
Length = 3677
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1026 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1085
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1086 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1145
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1146 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1202
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1203 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1262
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1263 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1315
>gi|5032285|ref|NP_003998.1| dystrophin Dp427l isoform [Homo sapiens]
gi|5032315|ref|NP_004001.1| dystrophin Dp427p2 isoform [Homo sapiens]
Length = 3562
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 911 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 970
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 971 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1030
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1031 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1087
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1088 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1147
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1148 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1200
>gi|148825650|ref|YP_001290403.1| DNA repair protein [Haemophilus influenzae PittEE]
gi|229846990|ref|ZP_04467096.1| DNA repair protein [Haemophilus influenzae 7P49H1]
gi|148715810|gb|ABQ98020.1| DNA repair protein [Haemophilus influenzae PittEE]
gi|229810074|gb|EEP45794.1| DNA repair protein [Haemophilus influenzae 7P49H1]
Length = 558
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|148980397|ref|ZP_01816040.1| putative methyl-accepting chemotaxis protein [Vibrionales bacterium
SWAT-3]
gi|145961269|gb|EDK26581.1| putative methyl-accepting chemotaxis protein [Vibrionales bacterium
SWAT-3]
Length = 374
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 70/208 (33%), Gaps = 8/208 (3%)
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + K +++ N V ++E+ Q++ ++ SS +
Sbjct: 161 RMNYFPVRDEFSEIAITIDKVAEREQNMVLSIQESVALMQQISSDLNQSTQQ-SSDISGN 219
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + + + + + ++ ++++ + + L +
Sbjct: 220 QQEHLNSLASATEQMAATIREVATLAHASSSQTMDARGVAQSGQVKVSNTLESISNLSQE 279
Query: 356 INNIS-ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG------LNDI 408
I + S A++E ++ + T SE+ N + + G +++
Sbjct: 280 IQSASQAVEELDANAAQIDEVVTTINGISEQTNLLALNAAIEAARAGEQGRGFAVVADEV 339
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L + Q+ + + +RN Q +
Sbjct: 340 RALAGRTQQATVEIQSMIESLQRNSQSL 367
>gi|145547455|ref|XP_001459409.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427234|emb|CAK92012.1| unnamed protein product [Paramecium tetraurelia]
Length = 682
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 41/384 (10%), Positives = 118/384 (30%), Gaps = 18/384 (4%)
Query: 69 VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIA 128
+ + + S+ + + + + L ST T ++ ++ + I
Sbjct: 150 QDIQIKNDNFKSSVEQIIKQLSSDLTESTKNWKLTAIEIEQSFGKVDNKHSDLINI---- 205
Query: 129 TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIST 188
++ Q + S ++ +N + +R I+ ++ +
Sbjct: 206 VKQEQVKLKQIQDSILDINKKQTQNINTFEVMDTRLIKADVQITTLKKQILEVDQLINKN 265
Query: 189 VLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQV 248
M+ S + + +D Q + +
Sbjct: 266 KQVQMFLIYYLPMYMQAQISDSLFTCLPLKLFYKFTQFEKQKFDYLDKQLLEYSGDPNIQ 325
Query: 249 SSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADST 308
+ + + + + ++ D SD ++ +++
Sbjct: 326 ILIDEYSKALAEVMKRNSRISQMIFMNQKKEQKDSHSSDSDMDSDNRSQRTNIQHSIQIR 385
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALK--ENN 366
+ ++ + Q+ +N + N + + + + ++ + E
Sbjct: 386 QDSTNNHRKESIYSKDAQQSAMMQQQKKNSVQSNNSNLIYYEDQIKQMKEQFQQEIDELK 445
Query: 367 SLFKDAQ-RAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
L + + + + ++T+++I+ I +N Q S N I+NL L++ ++ +
Sbjct: 446 QLNINIKKQLVQNQKETNDQISLNISQCQSNNQKLLNSTTNQIKNLEENLKKALSQDNS- 504
Query: 426 LNNFERNPQDIVWGREKGSVKIYK 449
NP D+V+ VK +K
Sbjct: 505 ------NPNDLVF----EQVKQFK 518
>gi|119619467|gb|EAW99061.1| dystrophin (muscular dystrophy, Duchenne and Becker types), isoform
CRA_a [Homo sapiens]
Length = 3681
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1030 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1089
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1090 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1149
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1150 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1206
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1207 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1266
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1267 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1319
>gi|163800840|ref|ZP_02194740.1| hypothetical protein 1103602000593_AND4_01218 [Vibrio sp. AND4]
gi|159175189|gb|EDP59986.1| hypothetical protein AND4_01218 [Vibrio sp. AND4]
Length = 884
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 12/89 (13%), Positives = 31/89 (34%), Gaps = 5/89 (5%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTD-SSVRFNGIPVGRIVGLFL 73
+ + + + + +S G ++ GL +++R+ G+ VG + + L
Sbjct: 26 LLPILTMVLAGWLVMKSIHDAGQGVQI---YFSDAAGLVAGRTTIRYQGLEVGMVRDINL 82
Query: 74 DQE-YPNHSLAKALIRPDTPLYPSTTATI 101
++ + A L T +
Sbjct: 83 SEDLGSIYVDADIYPEATKLLNDKTRFWL 111
Score = 36.8 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 7/111 (6%), Positives = 29/111 (26%), Gaps = 1/111 (0%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHS-LAKALIRPDTPLYPSTTATIRTQGLAGIT 110
+ + + + + VGR+ + L + + + ++ + I
Sbjct: 766 VQVGTPILYRQLEVGRVTKVTLGEFADRIVTKIEIQPEYAYLVRQNSVFWNVSGVDVSIG 825
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDS 161
+ ++ + + P+ N +++
Sbjct: 826 LGGANIKAGTFDSLVRGGIAFSTPEQSKIPPAAKNGHSFYLYPEAEEAWTQ 876
>gi|5032287|ref|NP_004000.1| dystrophin Dp427p1 isoform [Homo sapiens]
Length = 3681
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 76/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1030 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1089
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1090 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1149
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1150 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1206
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1207 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1266
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1267 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1319
>gi|309972796|gb|ADO95997.1| DNA repair protein RecN [Haemophilus influenzae R2846]
Length = 558
Score = 38.0 bits (85), Expect = 3.5, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|301168663|emb|CBW28254.1| recombination and repair protein [Haemophilus influenzae 10810]
Length = 558
Score = 38.0 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|242876558|gb|ACS94028.1| recombination protein [Pasteurellaceae bacterium JF4016]
gi|242876560|gb|ACS94029.1| recombination protein [Pasteurellaceae bacterium JF4134]
gi|242876564|gb|ACS94031.1| recombination protein [Pasteurellaceae bacterium JF4141]
gi|242876566|gb|ACS94032.1| recombination protein [Pasteurellaceae bacterium JF4142]
gi|242876568|gb|ACS94033.1| recombination protein [Pasteurellaceae bacterium JF4213]
Length = 439
Score = 38.0 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 25/230 (10%), Positives = 75/230 (32%), Gaps = 12/230 (5%)
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
T + + D + +++ + Q + + + +Q
Sbjct: 60 RWLTDHELQDQDNPEECILRRLVNQDGRSKAFINNTPVSASQLKEFGQYLVHINGQHASQ 119
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ ++ L + + ++ N + S +++ E ++Q + +
Sbjct: 120 LLLKNDFQLQALDNFCAHNHLLEQMKTDYLNWKELQSQVKTFNQKCVENEAKKQLLQYQV 179
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
N ++ N+ EL + +S ++ L + + + ++ +
Sbjct: 180 NELDEFNLRPNEY----QELEEEQRRLSNSEQLTQLSQSVLQILTENETV--NVDSLLYR 233
Query: 393 IGNNLQNFSQSGLN--DIQNLVRKL----QETVNHFDDCLNNFERNPQDI 436
+L++ ++ D Q L+++ QE + N E +PQ +
Sbjct: 234 TTQHLEDLAELDTRYVDAQALLQEALIQVQEAASEIQHLSANIEEDPQVL 283
>gi|260773397|ref|ZP_05882313.1| preprotein translocase subunit YajC [Vibrio metschnikovii CIP
69.14]
gi|260612536|gb|EEX37739.1| preprotein translocase subunit YajC [Vibrio metschnikovii CIP
69.14]
Length = 110
Score = 38.0 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 12/91 (13%), Positives = 30/91 (32%), Gaps = 7/91 (7%)
Query: 11 GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVG 70
G F + I+ F I++ + E + ++ V +G+ VGRI
Sbjct: 18 GGFEMLIMLGMFAVIFYFMIYRPQSKRVKEHKSLMAS----MAKGDEVLTSGVLVGRITK 73
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATI 101
+ + + + + + + +
Sbjct: 74 I---ADDNDFISVELNNNNEVVIKKDFVSAV 101
>gi|16272044|ref|NP_438243.1| DNA repair protein [Haemophilus influenzae Rd KW20]
gi|260580626|ref|ZP_05848453.1| DNA repair protein RecN [Haemophilus influenzae RdAW]
gi|1172896|sp|P44496|RECN_HAEIN RecName: Full=DNA repair protein recN; AltName: Full=Recombination
protein N
gi|1573019|gb|AAC21748.1| DNA repair protein (recN) [Haemophilus influenzae Rd KW20]
gi|260092688|gb|EEW76624.1| DNA repair protein RecN [Haemophilus influenzae RdAW]
Length = 558
Score = 38.0 bits (85), Expect = 3.6, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|37527759|ref|NP_931104.1| preprotein translocase subunit YajC [Photorhabdus luminescens
subsp. laumondii TTO1]
gi|36787195|emb|CAE16275.1| Preprotein translocase YajC [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 109
Score = 37.6 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 11/87 (12%), Positives = 25/87 (28%), Gaps = 8/87 (9%)
Query: 15 VSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLD 74
+ I+ F I++ E + +S V NG +GR+ +
Sbjct: 22 LIIMLVVFGLIFYFMILRPQQKRTKEHRKLMDS----ISKGDEVMTNGGLIGRVTKVS-- 75
Query: 75 QEYPNHSLAKALIRPDTPLYPSTTATI 101
+ + + + A +
Sbjct: 76 --DTGYIVVALNDTTEVTIKRDFVAAV 100
>gi|68248621|ref|YP_247733.1| DNA repair protein RecN [Haemophilus influenzae 86-028NP]
gi|68056820|gb|AAX87073.1| DNA repair protein RecN [Haemophilus influenzae 86-028NP]
Length = 558
Score = 37.6 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|325567184|ref|ZP_08143851.1| phage infection protein [Enterococcus casseliflavus ATCC 12755]
gi|325158617|gb|EGC70763.1| phage infection protein [Enterococcus casseliflavus ATCC 12755]
Length = 900
Score = 37.6 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 46/477 (9%), Positives = 125/477 (26%), Gaps = 67/477 (14%)
Query: 10 VGLFVVSILFFSFFSIYWLSRSNQYD--GPMAEVIIRIPGSVDG-------LSTDSSV-- 58
+ F++ L W + +D G +E+ I + + G + V
Sbjct: 23 ISAFLIIALMILPSLYAWFNIKALWDPYGNTSELPIAVYSADKGAEFQGKHIDIGDEVID 82
Query: 59 ------------------RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
G+ G+ ++ L T+ T
Sbjct: 83 TLHDNKQLGWRFVDSKEDLVEGVKSGK-----------YYAGIYLPADFSDDLISFTSGT 131
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS-----GINYFISNAENTS 155
I + + +++ + + + + T S N + ++
Sbjct: 132 IEKPTIEYYSNQKINAIAPKITEKGASSLQEEISQNFIETASSTLIKVFNEIGYDIDSNL 191
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
I+ I +N+ T + T + + +
Sbjct: 192 VSINKVKSMILDTDDNLATIDGYTKEIVTLHDKFPEIKEKIAKAEEFTDYIPQVDAMGEK 251
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
L T + + LQ+ ++N D + +T+ D +T +
Sbjct: 252 LIGLNDKLPTLKKEASIILTLQEKIPEIQNAGKQLKMIDDDFDDIASTMTDGIDTAKQGL 311
Query: 276 EVGQKIDHLLSDFS-----SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+V +++ L + + T + D+ ++ SS + Q +
Sbjct: 312 QVIEQVQAALPQIEQLGDQAASFATATKDGAQQFKDALPSISSSAQVTIDSVKQVASTTA 371
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNI-----------------SALKENNSLFKDAQ 373
+ N + + + Q ++ I+ + E ++ Q
Sbjct: 372 KWSKALNDSIDQDQLDQDRESILQTIDGLQQSIQQQQSMLDALIAFLGNIEGSAENAQIQ 431
Query: 374 RAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ D + + + + +++++ + + + L
Sbjct: 432 GVIGQLNDVKGHLTNVSQQLAGAKEAVQKGNVSEVKRYLSDITTAAEEIESLLGQIN 488
>gi|262394180|ref|YP_003286034.1| methyl-accepting chemotaxis protein [Vibrio sp. Ex25]
gi|262337774|gb|ACY51569.1| methyl-accepting chemotaxis protein [Vibrio sp. Ex25]
Length = 467
Score = 37.6 bits (84), Expect = 3.7, Method: Composition-based stats.
Identities = 23/259 (8%), Positives = 76/259 (29%), Gaps = 22/259 (8%)
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ I + ++ + + + + + +
Sbjct: 131 GVYYIMTFIGGAMFTMNKALNTLADGDLTARMNFFPVRDEFSEIAITIDKVAEREQQMVL 190
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + +Q S++ +S + +E + +++ + + ++
Sbjct: 191 SIQESVALMQQISSDLNQSIHHSSDISATQQEHLNSLASATEQMASTIREVATLAHDSSA 250
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
D+ S +S + + + I + + L+ ++ + E+++ IN
Sbjct: 251 Q-----TDDARSVAQSGQVKVENTLHSISNLSNEIQSASQAVAELDANAAQIDEVVTTIN 305
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
IS +L + A G ++++ L + Q+
Sbjct: 306 GISEQTNLLALNAAIEAA-------------RAGEQGRGFA----VVADEVRALAGRTQQ 348
Query: 418 TVNHFDDCLNNFERNPQDI 436
+ + +RN Q +
Sbjct: 349 ATVEIQTMIESLQRNSQSL 367
>gi|332188488|ref|ZP_08390210.1| preprotein translocase, YajC subunit [Sphingomonas sp. S17]
gi|332011500|gb|EGI53583.1| preprotein translocase, YajC subunit [Sphingomonas sp. S17]
Length = 116
Score = 37.6 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 10/89 (11%), Positives = 25/89 (28%), Gaps = 9/89 (10%)
Query: 13 FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLF 72
F+ F +++ M + S++G+ V G VG++ +
Sbjct: 27 FLSLAPLLLVFVVFYFLMIRPQQRRMKTLQA----SIEGVKKGDQVTTAGGIVGKVTRVE 82
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATI 101
+ + +T +
Sbjct: 83 -----DQLVEVEIAPNVRVRVVKATLTDV 106
>gi|220904215|ref|YP_002479527.1| methyl-accepting chemotaxis sensory transducer [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
gi|219868514|gb|ACL48849.1| methyl-accepting chemotaxis sensory transducer [Desulfovibrio
desulfuricans subsp. desulfuricans str. ATCC 27774]
Length = 676
Score = 37.6 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 43/423 (10%), Positives = 121/423 (28%), Gaps = 29/423 (6%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
V ++ + + L S GL + VR +I
Sbjct: 279 AIVTAVSVAAALLLVQLGISVFV----------------GLRVSAPVR-------KITSY 315
Query: 72 FLD-QEYPNHSLAKALIRPDTPLYPSTTATIR-TQGLAGITYIELSTLRKEKKTIFQIAT 129
L+ + S+ D + ++ E + ++ ++A
Sbjct: 316 ALEVADGKQDSVLTVRGSDDMGMLADALRSMEKNLRTLVFEAAEKAREAEKCGEECKLAM 375
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
++A A + + S A + + I E +E + ++ +
Sbjct: 376 NEAEQAKAKAEQARCDGMSSAAARIEEVAVKLGNSVSDIAEQVENTDVALSRAVSRLAEI 435
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ ++ + ++D + + + +S+ + Q Q L
Sbjct: 436 ASAMEEMNSTVLAVARNAGGAADISDAARNLAETGSSVVSQAVSSIQQVQQQSLGLKGG- 494
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTS 309
+ + I+ + V + + + + E +
Sbjct: 495 -MTLLDEHARAISRIMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEK 553
Query: 310 NMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS-L 368
M S+ I + +I ++ +N++ +++ + + I + + +
Sbjct: 554 TMTSTTDVGDAIRAIQSSAAQSIQQVDEAVNNISVATEYSNKSGQSLQEIVGMVDKTADE 613
Query: 369 FKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNN 428
+ A S++IN+ I + N L + + + +L+ D +
Sbjct: 614 VRAIATASEQQSAVSDEINKSISDV-NYLTGNTSESMKVALRELDELRHQTQSLMDLVEA 672
Query: 429 FER 431
++
Sbjct: 673 LKK 675
>gi|125817349|ref|XP_684289.2| PREDICTED: CAP-Gly domain-containing linker protein 2-like [Danio
rerio]
Length = 1041
Score = 37.6 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 38/381 (9%), Positives = 100/381 (26%), Gaps = 10/381 (2%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
L V G G + + E + D PL + A T+
Sbjct: 203 LKVGDRVLVGGTKTGVVRYV---GETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPPK 259
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
L + I +T + G++ + ++S S +
Sbjct: 260 FGLFAPIHKVIRIGFPSTSPAKAKKSKRMAMGVSSLAHSPSSSSISSVSSVASSVGGRPS 319
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMI 231
LT T + + + + + D + +
Sbjct: 320 RTGLLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHICEVEKE 379
Query: 232 KAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSK 291
A + Q + +N + + +T D E +E +K++ L +
Sbjct: 380 LAALKARHLQYATETE---SNLQQVRAMLASTQKDKMELANQLEEEKRKVEDLQFRVEEE 436
Query: 292 MKSKETSAFLENIADSTSNMRSSI--SAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+K + + + ++++ + T + + ++
Sbjct: 437 SITKGDLETQTKLEHARIRQLEQCLHLEKSKAERLQKELEEKMQTTVEEKTRVMQLEEEL 496
Query: 350 AELMSKINNISA--LKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLND 407
A +++ + + ++ DA+ + + + S+G + S
Sbjct: 497 ALRKAEVEELQVRFQRGSSGSATDAEDGEPGITSETLVLREQLLSVGRERREESSQLRER 556
Query: 408 IQNLVRKLQETVNHFDDCLNN 428
+ + Q+ +
Sbjct: 557 YEASLSTSQKEIERLKAITER 577
>gi|84394489|ref|ZP_00993201.1| putative methyl-accepting chemotaxis protein [Vibrio splendidus
12B01]
gi|84374884|gb|EAP91819.1| putative methyl-accepting chemotaxis protein [Vibrio splendidus
12B01]
Length = 467
Score = 37.6 bits (84), Expect = 3.8, Method: Composition-based stats.
Identities = 23/208 (11%), Positives = 72/208 (34%), Gaps = 8/208 (3%)
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ + + K +++ N V ++E+ Q++ ++ L + SS +
Sbjct: 161 RMNYFLVRDEFSEIAITIDKVAEREQNMVLSIQESVALMQQISSDLN-LSTQQSSDISGN 219
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
+ + + + + + + ++ ++ + + + L +
Sbjct: 220 QQEHLNSLASATEQMAATIREVATLAHESSSQTMDAHGVAQSGQVKVSRTLESISSLSQE 279
Query: 356 INNIS-ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG------LNDI 408
I + S A++E ++ + T SE+ N + + G +++
Sbjct: 280 IQSASQAVEELDANAAQIDEVVATINGISEQTNLLALNAAIEAARAGEQGRGFAVVADEV 339
Query: 409 QNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ L + Q+ + + +RN Q +
Sbjct: 340 RALAGRTQQATVEIQSMIESLQRNSQSL 367
>gi|145512854|ref|XP_001442338.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409691|emb|CAK74941.1| unnamed protein product [Paramecium tetraurelia]
Length = 536
Score = 37.6 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 38/370 (10%), Positives = 100/370 (27%), Gaps = 7/370 (1%)
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
+ V ++ + Q+ +I P + IR +G + S+ +
Sbjct: 73 IRSVRVNQVSTRSIHQQSEAQVSTTNVIVPAQQQPLQQSQQIRREGPRSLRNYITSSPQG 132
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ ++ A + P + + + E +
Sbjct: 133 PLSHKSNKSFSLSRPAFVEYYPPVYMPHVEPIYKQTIIENPIKVVDLVRFEEMWSKRMRG 192
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
I + + + + + D +N + + ++ I+
Sbjct: 193 IEEMLETKNQVIVQSENFELRAQNNPDSQTIIDLQNELFRVKTQLEERERQIQ----LMK 248
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q+ ++ ++ Q+ + L + +
Sbjct: 249 QQLQNARDQIEFESKQNRSASNILTSELNIKITNLQQTISNLQIDLKSVQEMAEKYKLEN 308
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
F ++ + + ++Q S + S N S Q EL K+N++
Sbjct: 309 FQLKAELQQNSSMLNGKDEIIMKLKQQLKSSLDQYNLDAQSGKNVSQQIINELQFKLNSL 368
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETV 419
+ L +++ + +IN+ + ++Q+ + I L +L E
Sbjct: 369 QQTITSQQLNLNSKDDL--IEKLRMEINQ-LRQERQHMQDLCNQKDDTISKLQMELNELY 425
Query: 420 NHFDDCLNNF 429
D
Sbjct: 426 QQVDQLTEEI 435
>gi|86749370|ref|YP_485866.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
gi|86572398|gb|ABD06955.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris HaA2]
Length = 670
Score = 37.6 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 26/275 (9%), Positives = 75/275 (27%), Gaps = 8/275 (2%)
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
E +K I + + + + + + S + + +
Sbjct: 383 RELAQKRKQDMIRLADEFEGAIGEIVDTVSAASEELEASATSLTTTAERSQSLATTVASA 442
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
+ ++Q V E + S N + + + + + + +++ +
Sbjct: 443 SEEASTNVQSVASATEEMSSSVNEISRQVQESARIAQEAVDQARLTNDRVEELAQAAARI 502
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
++ T A N+ + + ++ + E + SQ+
Sbjct: 503 GDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVKALA-EQTAKATGEISQQ 561
Query: 349 FAELMSKINN-ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS------ 401
+ S ++A+KE T E+ I N+Q +
Sbjct: 562 INGIQSATEQSVAAIKEIGGTIGRMSEISSTIASAVEEQGAATQEISRNVQQAAYGTQQV 621
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ + D+Q + + + + +
Sbjct: 622 SANITDVQRGATETGAASSQVLHAAQSLSGDSNRL 656
>gi|269102649|ref|ZP_06155346.1| paraquat-inducible protein B [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162547|gb|EEZ41043.1| paraquat-inducible protein B [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 874
Score = 37.6 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 23/58 (39%), Gaps = 2/58 (3%)
Query: 46 PGSVDGLSTD-SSVRFNGIPVGRIVGLFLDQE-YPNHSLAKALIRPDTPLYPSTTATI 101
+ GL +++R+ G+ VG + + L ++ + A L +T +
Sbjct: 53 FNNASGLIAGRTTIRYQGLEVGMVRDVSLSKDLKSIYVTADIYPEAAKTLRSNTQFWL 110
Score = 37.6 bits (84), Expect = 3.9, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPD 90
S + + G+ +G+I L LD+E N +A A I P
Sbjct: 297 GSPIMYRGLQIGQISDLRLDKET-NKIIADAAIEPS 331
>gi|15839551|ref|NP_334588.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|253797095|ref|YP_003030096.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis KZN 1435]
gi|254366624|ref|ZP_04982668.1| MCE-family lipoprotein lprK (MCE-family lipoprotein mce1e)
[Mycobacterium tuberculosis str. Haarlem]
gi|289552425|ref|ZP_06441635.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis KZN 605]
gi|298527565|ref|ZP_07014974.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|308378568|ref|ZP_07483026.2| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu009]
gi|13879663|gb|AAK44402.1| virulence factor mce family protein [Mycobacterium tuberculosis
CDC1551]
gi|134152136|gb|EBA44181.1| MCE-family lipoprotein lprK (MCE-family lipoprotein mce1e)
[Mycobacterium tuberculosis str. Haarlem]
gi|253318598|gb|ACT23201.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis KZN 1435]
gi|289437057|gb|EFD19550.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis KZN 605]
gi|298497359|gb|EFI32653.1| virulence factor mce family protein [Mycobacterium tuberculosis
94_M4241A]
gi|308352051|gb|EFP40902.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu009]
gi|328456882|gb|AEB02305.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis KZN 4207]
Length = 389
Score = 37.6 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 9/105 (8%)
Query: 38 MAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ +++P + ++G +S V + VG I + L + ++ D L
Sbjct: 50 SYTIYVQMPDTLAING---NSRVMVADVWVGSIRAIKL---KNWVATLTLSLKKDVTLPK 103
Query: 96 STTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQRAMITA 139
+ TA I L G ++E + + T +R+
Sbjct: 104 NATAKIGQTSLLGSQHVELAAPPDPSPVPLKDGDTIPLKRSSAYP 148
>gi|325475461|gb|EGC78642.1| methyl-accepting chemotaxis protein [Treponema denticola F0402]
Length = 729
Score = 37.6 bits (84), Expect = 4.0, Method: Composition-based stats.
Identities = 41/434 (9%), Positives = 117/434 (26%), Gaps = 32/434 (7%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIP 64
+GLF+ + + + I G L+ +V+
Sbjct: 323 NMILIGLFMFV-----LYFTLAFIFAGALKRYFKRLEIVFGKIASGDLTDRLAVK----- 372
Query: 65 VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTI 124
+ + + ++ + + + ++
Sbjct: 373 -----------KNNEVGRIMMNLNTAIENNHTMICLLKDEADKMNSI-----GSQLSSSM 416
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ A Q + + + + + + T +I
Sbjct: 417 EETAAAIKQIGENVKGVKEKAMSQAAGVTETVATVEQINGRLSRLVSSIEMQTESINESS 476
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
+ T +A N I K + + + + A + + +
Sbjct: 477 VVITRMAENTVKIAKTLDQNNELIKTVYGQTKVGKDGARTANEIVKQIAEKSASLLEASQ 536
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL--LSDFSSKMKSKETSAFLE 302
IQ ++ + E+ + F V +I L S+ K + E
Sbjct: 537 IIQNIASQTNLLAMNAAIEAAHAGESGKGFAVVADEIRKLAEGSNLQGKQIAAVIKETTE 596
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
I + T + ++ + +I ++I + ++ + + + +IN++
Sbjct: 597 IIHNITEAGSRAEKTFIDVYNLVSQISEKEDSILEVMREQEENGKHVLDAIKRINDV--T 654
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
E +S + + +K+ +++ + SG + I V+++ +
Sbjct: 655 SEIDSASAEMLEGGNQIGQEMQKLAEITLETTDSMNEIA-SGADQITIAVKEVSDITQKN 713
Query: 423 DDCLNNFERNPQDI 436
+ N +
Sbjct: 714 KASIENLSKEVSKF 727
>gi|42525863|ref|NP_970961.1| methyl-accepting chemotaxis protein DmcA [Treponema denticola ATCC
35405]
gi|2352917|gb|AAB69316.1| methyl-accepting chemotaxis protein [Treponema denticola]
gi|41815913|gb|AAS10842.1| methyl-accepting chemotaxis protein DmcA [Treponema denticola ATCC
35405]
Length = 729
Score = 37.6 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 58/419 (13%), Positives = 144/419 (34%), Gaps = 22/419 (5%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIP 64
+GLF+ + + + I G L+ +V+ N
Sbjct: 323 NMILIGLFMFV-----LYFTLAFIFAGALKRYFKRLEIVFGKIASGDLTDRLAVKKNN-E 376
Query: 65 VGRI-----VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
VGRI + + L K + ++++ A E K
Sbjct: 377 VGRIMMNLNTAIE--NNHTMICLLKDEADKMNSIGSQLSSSMEETAAAIKQIGENVKGVK 434
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+K + Q A A + ++ +S+ E ++ I++SS I ++ EN K T
Sbjct: 435 -EKAMSQAAGVTETVATVEQINGRLSRLVSSIEMQTESINESSVVITRMAENTVKIAKTL 493
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
N E I TV D ++ ++ + + +I ++ + +
Sbjct: 494 DQNNELIKTVYGQTKVGKDGARTANEIVKQIAEKSASLLEASQIIQNIASQTNLLAMNAA 553
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
+ + V + + + Q + + + + + ++++T
Sbjct: 554 IEAAHAGESGKGFAVVADEIRKLAEGSNLQGKQIAAVIKETTEIIHDITEAGSRAEKTFI 613
Query: 300 FLEN-IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ N ++ + S + +RE + + ++ I I ++TS ++ +S + E ++I
Sbjct: 614 DVYNLVSQISEKEDSILEVMREQEENGKHVLDAIKRINDVTSEIDSASAEMLEGGNQIGQ 673
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
E L + + + + ++ ++ + + +Q I+NL ++ +
Sbjct: 674 -----EMQKLAEITLETTDSMNEIASGADQITIAVKE-VSDITQKNKASIENLSNEVSK 726
>gi|226361225|ref|YP_002779003.1| Mce family protein [Rhodococcus opacus B4]
gi|226239710|dbj|BAH50058.1| putative Mce family protein [Rhodococcus opacus B4]
Length = 360
Score = 37.6 bits (84), Expect = 4.1, Method: Composition-based stats.
Identities = 29/306 (9%), Positives = 78/306 (25%), Gaps = 16/306 (5%)
Query: 4 KNYYTSVGL-FVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG 62
+ G V + + F+ W + + D + I +P G+ + + V G
Sbjct: 16 RQSRVLHGAGLGVVVTTCAVFAAVW-AYPSGADTDGLPISIDVPYVGPGVDSGTKVILRG 74
Query: 63 IPVGRIV------------GLFLDQEYPNHSLAKALIRPDTPLYPSTTAT--IRTQGLAG 108
VG + L LD + + Y +TA + G +
Sbjct: 75 GEVGVVTGLERTGADSVRMDLQLDPDEIGGLTDAFDVDFRPQNYFGSTAVNLVGRPGGSD 134
Query: 109 ITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKI 168
+ E+ A+ + + + ++ +
Sbjct: 135 LEAHRTLDRTPTGDFTMSTMIEKGSLAVDGTLTESMITSLDKVVRYTDGLTPMFDAALVL 194
Query: 169 IENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLD 228
+ + + A++ + + ++ + ++S + +
Sbjct: 195 ADRVAQTQQALPADLLGRVNDVLDVFPAFNRQAIDSLAHIYNSTYNQRTDGSVGVDDPFM 254
Query: 229 KMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDF 288
A Q+ + V V ++ + G + + L +
Sbjct: 255 DETDAGLTLAAGQLFGQAGQLLKSHGDELVPVTEVVSELAGVVPHLYDGGARPERLRTAV 314
Query: 289 SSKMKS 294
+
Sbjct: 315 ERLESA 320
>gi|220920994|ref|YP_002496295.1| TRAP C4-dicarboxylate transport system permease subunit DctM
[Methylobacterium nodulans ORS 2060]
gi|219945600|gb|ACL55992.1| TRAP C4-dicarboxylate transport system permease DctM subunit
[Methylobacterium nodulans ORS 2060]
Length = 632
Score = 37.6 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 5 NYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIP 64
+T +GL + + +F ++ WL+ + G ++ ++ + V ++T + F
Sbjct: 179 ATWTQIGL-ALVGVAAAFGALLWLAPVFEDLGNLSLLVFFLLFVVVSMATGMPIAFA-FL 236
Query: 65 VGRIVGLFLDQEYPNHSL 82
+G + + P +
Sbjct: 237 IGTVSYIAFATTIPLSIV 254
>gi|13272546|gb|AAK17202.1|AF335500_1 major plasmodial myosin heavy chain [Physarum polycephalum]
Length = 2148
Score = 37.6 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 24/210 (11%), Positives = 74/210 (35%), Gaps = 13/210 (6%)
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
+ + N++ N +++ + D ++ + ++ +KID L D +K
Sbjct: 980 QHDFDVERIANLEKLKNELQAEVEELSDQFADETKSRASLEKQKRKIDSDLEDLENKYNE 1039
Query: 295 KETSAFLENI--ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
+ T + S++RS+ S + ++R + +E ++ ++ +
Sbjct: 1040 EVTQRTELSKLKNQLDSDLRSTTSQLESEIERRGILEGLQKKLEAALASETAKLEEEQKN 1099
Query: 353 MSKINNI-----SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ------NFS 401
+ + ++ +D ++ T +K++ + + + L
Sbjct: 1100 RNALEKAKKALEQQQRDLTQELQDEKKNRDTAEKARKKLDLDLTELRDQLDVKGGDVKAL 1159
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
++ + L+ V ++N E+
Sbjct: 1160 ADLKQKVEQELEDLRRQVEELKKAVSNLEK 1189
>gi|295084243|emb|CBK65766.1| hypothetical protein [Bacteroides xylanisolvens XB1A]
Length = 452
Score = 37.6 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 31/330 (9%), Positives = 75/330 (22%), Gaps = 17/330 (5%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
V G+ R+V +D P P + G +
Sbjct: 45 GDPVTIAGV---RVVPWGIDNNLPKTVRDILEKNNLGPGILDRKTGLMYG--QGPMLYRV 99
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + E+ + I E + S I + I
Sbjct: 100 NVVNNERVQEWLIDNEIQEWLDTWDYRSYIRNAFVEYNHMKGVFVKYYAAKSIRIGKPWI 159
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF---------NTITDLIT 225
+ + + N+ ++ + S SK + T+
Sbjct: 160 TRLEALHSTDCRMVWPENDSRRLEDVKQFLIGDFDSYTSKRMMLYSIFDKWNPSATETAV 219
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
M + + + ++ + E +
Sbjct: 220 KYHSMRSFGRNMYAISSFHGSIPWLLDANTLPEIIQYLNENMIASAYIVHEPEEYWRQKE 279
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + E I + I+ + K + ++ ++ + N
Sbjct: 280 EMIRAMHEEWREAQIYEEIDRLRDELTKRIADVMAGKKNAGKFFTCVDFVDQ---DGNLQ 336
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRA 375
S K + ++ A + S D+
Sbjct: 337 SWKIEPIEMNVDKYIAAQAEISRIADSSTT 366
>gi|299145671|ref|ZP_07038739.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
gi|298516162|gb|EFI40043.1| conserved hypothetical protein [Bacteroides sp. 3_1_23]
Length = 452
Score = 37.6 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 31/330 (9%), Positives = 75/330 (22%), Gaps = 17/330 (5%)
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
V G+ R+V +D P P + G +
Sbjct: 45 GDPVTIAGV---RVVPWGIDNNLPKTVRDILEKNNLGPGILDRKTGLMYG--QGPMLYRV 99
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + E+ + I E + S I + I
Sbjct: 100 NVVNNERVQEWLIDNEIQEWLDTWDYRSYIRNAFVEYNHMKGVFVKYYAAKSIRIGKPWI 159
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF---------NTITDLIT 225
+ + + N+ ++ + S SK + T+
Sbjct: 160 TRLEALHSTDCRMVWPENDSRRLEDVKQFLIGDFDSYTSKRMMLYSIFDKWNPSATETAV 219
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
M + + + ++ + E +
Sbjct: 220 KYHSMRSFGRNMYAISSFHGSIPWLLDANTLPEIIQYLNENMIASAYIVHEPEEYWRQKE 279
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ + + E I + I+ + K + ++ ++ + N
Sbjct: 280 EMIRAMHEEWREAQIYEEIDRLRDELTKRIADVMAGKKNAGKFFTCVDFVDQ---DGNLQ 336
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRA 375
S K + ++ A + S D+
Sbjct: 337 SWKIEPIEMNVDKYIAAQAEISRIADSSTT 366
>gi|187954437|gb|AAI41186.1| Pde4dip protein [Mus musculus]
Length = 2463
Score = 37.6 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 26/337 (7%), Positives = 87/337 (25%), Gaps = 13/337 (3%)
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
Q + P + A + S + E+
Sbjct: 10 CHHAPPPCWAHHAPRQSPRQPSSRERRPPERAGSWAVAAEEEEAASAAPCMRHYFGEDDG 69
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + T + +S + + + P L+ +
Sbjct: 70 EMVPRTSSAAAFLSDTKDRGPPVQSQTWRSAERVPFGQAHSLRAFEKPPLVQTQALRDFE 129
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
L + + ++++ + Q + + + E+ +++ L + + +
Sbjct: 130 KHLNDLKKENFSLKLRIYFLEERMQQKYEVSRE--DVYKRNIELKVEVESLKRELQDRKQ 187
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ + +S + + N I+ + + + E+
Sbjct: 188 HLDKTWADAEDLNSQNEAELRRQVEERQQETEHVYELLGNKIQLLQEEPRLAKNEATEME 247
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
+ + N L + A D + + + L +
Sbjct: 248 TLVEAEKRC--NLELSERWTNAAKNREDAAGDQEKP---------DQYSEALAQRDRRIE 296
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+L++++ + + + Q ++ E+ + +P
Sbjct: 297 ELRQSLAAQEGLVEQLSQEKQQLLHLLEEPASMEVQP 333
>gi|15607314|ref|NP_214687.1| MCE-family lipoprotein LprK [Mycobacterium tuberculosis H37Rv]
gi|31791351|ref|NP_853844.1| MCE-family lipoprotein LprK [Mycobacterium bovis AF2122/97]
gi|121636085|ref|YP_976308.1| mce family lipoprotein LprK [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659937|ref|YP_001281460.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis H37Ra]
gi|148821365|ref|YP_001286119.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis F11]
gi|167970294|ref|ZP_02552571.1| MCE-family lipoprotein lprK (MCE-family lipoprotein mce1e)
[Mycobacterium tuberculosis H37Ra]
gi|215406166|ref|ZP_03418347.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis 02_1987]
gi|215414038|ref|ZP_03422697.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis 94_M4241A]
gi|215425379|ref|ZP_03423298.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis T92]
gi|215433093|ref|ZP_03431012.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis EAS054]
gi|215448451|ref|ZP_03435203.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis T85]
gi|218755907|ref|ZP_03534703.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis GM 1503]
gi|219555971|ref|ZP_03535047.1| MCE family lipoprotein LprK [Mycobacterium tuberculosis T17]
gi|224988558|ref|YP_002643245.1| putative MCE-family lipoprotein mce1E [Mycobacterium bovis BCG str.
Tokyo 172]
gi|254233562|ref|ZP_04926888.1| MCE-family lipoprotein lprK (MCE-family lipoprotein mce1e)
[Mycobacterium tuberculosis C]
gi|254549112|ref|ZP_05139559.1| putative MCE-family lipoprotein mce1E [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|260199176|ref|ZP_05766667.1| putative MCE-family lipoprotein mce1E [Mycobacterium tuberculosis
T46]
gi|260203318|ref|ZP_05770809.1| putative MCE-family lipoprotein mce1E [Mycobacterium tuberculosis
K85]
gi|289441548|ref|ZP_06431292.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis T46]
gi|289568072|ref|ZP_06448299.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis T17]
gi|289572753|ref|ZP_06452980.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis K85]
gi|289747940|ref|ZP_06507318.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289748649|ref|ZP_06508027.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis T92]
gi|289756238|ref|ZP_06515616.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289760275|ref|ZP_06519653.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|289764289|ref|ZP_06523667.1| MCE-family lipoprotein lprK (MCE-family lipoprotein mce1e)
[Mycobacterium tuberculosis GM 1503]
gi|294994647|ref|ZP_06800338.1| putative MCE-family lipoprotein mce1E [Mycobacterium tuberculosis
210]
gi|297632651|ref|ZP_06950431.1| putative MCE-family lipoprotein mce1E [Mycobacterium tuberculosis
KZN 4207]
gi|297729626|ref|ZP_06958744.1| putative MCE-family lipoprotein mce1E [Mycobacterium tuberculosis
KZN R506]
gi|306774263|ref|ZP_07412600.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu001]
gi|306779007|ref|ZP_07417344.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu002]
gi|306782795|ref|ZP_07421117.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu003]
gi|306787162|ref|ZP_07425484.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu004]
gi|306791718|ref|ZP_07430020.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu005]
gi|306795762|ref|ZP_07434064.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu006]
gi|306801758|ref|ZP_07438426.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu008]
gi|306805969|ref|ZP_07442637.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu007]
gi|306974597|ref|ZP_07487258.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu010]
gi|307082306|ref|ZP_07491476.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu011]
gi|307082650|ref|ZP_07491763.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu012]
gi|313656952|ref|ZP_07813832.1| putative MCE-family lipoprotein mce1E [Mycobacterium tuberculosis
KZN V2475]
gi|2213510|emb|CAB09756.1| POSSIBLE MCE-FAMILY LIPOPROTEIN LPRK (MCE-FAMILY LIPOPROTEIN MCE1E)
[Mycobacterium tuberculosis H37Rv]
gi|31616936|emb|CAD93043.1| POSSIBLE MCE-FAMILY LIPOPROTEIN LPRK (MCE-FAMILY LIPOPROTEIN MCE1E)
[Mycobacterium bovis AF2122/97]
gi|121491732|emb|CAL70194.1| Possible mce-family lipoprotein lprK (MCE-family lipoprotein mce1E)
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124603355|gb|EAY61630.1| MCE-family lipoprotein lprK (MCE-family lipoprotein mce1e)
[Mycobacterium tuberculosis C]
gi|148504089|gb|ABQ71898.1| MCE-family lipoprotein LprK [Mycobacterium tuberculosis H37Ra]
gi|148719892|gb|ABR04517.1| MCE-family lipoprotein lprK (MCE-family lipoprotein mce1e)
[Mycobacterium tuberculosis F11]
gi|224771671|dbj|BAH24477.1| putative MCE-family lipoprotein mce1E [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289414467|gb|EFD11707.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis T46]
gi|289537184|gb|EFD41762.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis K85]
gi|289541825|gb|EFD45474.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis T17]
gi|289688468|gb|EFD55956.1| virulence factor mce family protein [Mycobacterium tuberculosis
02_1987]
gi|289689236|gb|EFD56665.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis T92]
gi|289696825|gb|EFD64254.1| virulence factor mce family protein [Mycobacterium tuberculosis
EAS054]
gi|289711795|gb|EFD75811.1| MCE-family lipoprotein lprK (MCE-family lipoprotein mce1e)
[Mycobacterium tuberculosis GM 1503]
gi|289715839|gb|EFD79851.1| virulence factor mce family protein [Mycobacterium tuberculosis
T85]
gi|308217097|gb|EFO76496.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu001]
gi|308328035|gb|EFP16886.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu002]
gi|308332315|gb|EFP21166.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu003]
gi|308336066|gb|EFP24917.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu004]
gi|308339697|gb|EFP28548.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu005]
gi|308343704|gb|EFP32555.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu006]
gi|308347424|gb|EFP36275.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu007]
gi|308351476|gb|EFP40327.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu008]
gi|308356001|gb|EFP44852.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu010]
gi|308359956|gb|EFP48807.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis SUMu011]
gi|308367523|gb|EFP56374.1| virulence factor Mce family protein [Mycobacterium tuberculosis
SUMu012]
gi|323717162|gb|EGB26371.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis CDC1551A]
gi|326905929|gb|EGE52862.1| MCE-family lipoprotein mce1E [Mycobacterium tuberculosis W-148]
Length = 390
Score = 37.6 bits (84), Expect = 4.2, Method: Composition-based stats.
Identities = 18/105 (17%), Positives = 38/105 (36%), Gaps = 9/105 (8%)
Query: 38 MAEVIIRIPGS--VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYP 95
+ +++P + ++G +S V + VG I + L + ++ D L
Sbjct: 51 SYTIYVQMPDTLAING---NSRVMVADVWVGSIRAIKL---KNWVATLTLSLKKDVTLPK 104
Query: 96 STTATIRTQGLAGITYIE-LSTLRKEKKTIFQIATERNQRAMITA 139
+ TA I L G ++E + + T +R+
Sbjct: 105 NATAKIGQTSLLGSQHVELAAPPDPSPVPLKDGDTIPLKRSSAYP 149
>gi|327352798|gb|EGE81655.1| vacuolar ATPase proteolipid subunit C [Ajellomyces dermatitidis
ATCC 18188]
Length = 182
Score = 37.6 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 6/64 (9%), Positives = 17/64 (26%), Gaps = 3/64 (4%)
Query: 13 FVVSILFFSFFSI---YWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIV 69
V++ + + + + GLS + G +G +
Sbjct: 81 VVMAGIIAVYGLVIAVLIAGDLGPPPQKTYSLYTGFMHLAAGLSVGLAGLAAGYTIGIVG 140
Query: 70 GLFL 73
+ +
Sbjct: 141 DVGV 144
>gi|320041205|gb|EFW23138.1| conserved hypothetical protein [Coccidioides posadasii str. Silveira]
Length = 2223
Score = 37.6 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 17/233 (7%), Positives = 74/233 (31%), Gaps = 10/233 (4%)
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+ + + ++K+ + + + + + + ++ ++
Sbjct: 1411 RHRSRSPLNRQNRLIEKIRQVVSESVTTNQTPKEPAPLVDLSEIHRRSEHLKAEIIDSIV 1470
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
++ + + + ++ + + + R I D + +
Sbjct: 1471 NHPKLAEMMRSSNEEKDAEKLQMQLEGLQSMLRLADDRAEEEYKNRRRIQDSLAESQRLL 1530
Query: 333 NTIENITSNLNDSSQKFAELM-----SKINNISALKENNSLFKDAQR----AMHTFRDTS 383
E+ D++ E + K+ + L++ ++L + Q + +
Sbjct: 1531 KAAEDDAVRHRDAAAASEEALRTFKEQKLPEMERLEKQSALLNENQESLQLTLSELSQKN 1590
Query: 384 EKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ + + +S L++++ ++L+ T++ + + R Q +
Sbjct: 1591 ITLQGTLDEYRE-TGDHLRSQLDEVEGENKELRRTISVLKTQMEDSLRARQSL 1642
>gi|297181866|gb|ADI18044.1| ATPase involved in DNA repair [uncultured actinobacterium
HF0200_20K23]
Length = 531
Score = 37.6 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 54/171 (31%), Gaps = 5/171 (2%)
Query: 266 DVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQR 325
D+ Q + QK+ D K+ + + + R +
Sbjct: 111 DLHGQHQHQSLLQQKVQRSALDQYGKVDLEPLNEARNAERQLIEAIEELGGDTRTRAHEI 170
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK 385
+ + I+ + + A+L + + SA E S +++ D K
Sbjct: 171 DLLKFQVEEIQKAQLSDPTELDELAKLEELLADASAHIEYGSQARESISGDDGLIDALGK 230
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
I + + + ++ L ++ + D +++ E +PQ +
Sbjct: 231 IIASLSDRTPY-----KELADRLRGLQAEVTDVATLMRDLVDSIEDDPQRL 276
>gi|255279787|ref|ZP_05344342.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
gi|255269560|gb|EET62765.1| conserved hypothetical protein [Bryantella formatexigens DSM 14469]
Length = 842
Score = 37.6 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 50/447 (11%), Positives = 116/447 (25%), Gaps = 29/447 (6%)
Query: 1 MESKNYYTS-VGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M Y + + L + + + + V + GSV G+
Sbjct: 1 MNRNRNYKKTIAAALCVALSAEAVAPALAAGAIEDKDENVYVNLNQDGSVSGIYV----- 55
Query: 60 FNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRK 119
N +G + +Y ++S K L D L T+ + Y
Sbjct: 56 VNEYTLGEDTEI---VDYGDYSAVKNLSTEDEILLEDGKVTVNAAKGKFL-YQGDMADTT 111
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN----IEKP 175
I T + P + SD +++ +
Sbjct: 112 LPWLIDISYTLDGKEITAEELPGKSGALKISVSVKDNPASDDEFFDNYLMQATVTLDTEK 171
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ A+ T + V + + M + S+D +D
Sbjct: 172 CSNIRADGATEANVGKDRQILYNIMAGQEKEFTISADVTEFEMDALSFQAVPMSFDIDVD 231
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK-- 293
+ I E + + D +E +E+ + L S
Sbjct: 232 SLDTSSITEKTDEIKDAAEEFDDGAGELDDGAQELLDGVEELKDGAEELKDGASDLNSGT 291
Query: 294 ----------SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
S T + + S S S ++ + + + I + +
Sbjct: 292 GELVSGAGELSSGTGELVSGANELYSGAASLNSGLKTLNSGAKSLNKGIQSAASGAQAAQ 351
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQS 403
+++ AE E ++ + + + + ++ +
Sbjct: 352 KGAKELAEGAK--EAAEGSMELKDGSATLAESLKQLQTGAGSLQAALNTLTEKSPELTG- 408
Query: 404 GLNDIQNLVRKLQETVNHFDDCLNNFE 430
G + IQ + ++Q++++ +
Sbjct: 409 GSSQIQAALLQIQKSLDGITVGTEQMQ 435
>gi|328768750|gb|EGF78795.1| hypothetical protein BATDEDRAFT_89980 [Batrachochytrium
dendrobatidis JAM81]
Length = 1154
Score = 37.6 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 22/257 (8%), Positives = 81/257 (31%), Gaps = 10/257 (3%)
Query: 199 KMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSD 258
++ T+ ++ + + T+ T + +I +
Sbjct: 541 QIADVTKQIFDLRNTLDALHDATEKTTIEQSAYIKHLHDSLEIHKSSIVELEKQIHEDVQ 600
Query: 259 QVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAI 318
+ + + + + + + L + + + + ++++ I+A
Sbjct: 601 NLSVSNEVSKGLAEKLSTLSETVTRLGQQLEAYGSVDDVVKRVMDTIRTSTDFPGFIAAT 660
Query: 319 REITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHT 378
+ ++ + N+ + ++ + + T
Sbjct: 661 KSSETSEIELPPELWKAIESKLNMFGDKDQTIDVSNTAEARLKTF----ILAQIDDIRVT 716
Query: 379 FRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL------VRKLQETVNHFDDCLNNFERN 432
+ ++ R ++ + +++++QSG ND + +++ + + LN E+
Sbjct: 717 YATNADVDVRIRMALKDAIKDYTQSGQNDASLAARVDLKMDEVKALLQTKVEELNKLEQE 776
Query: 433 PQDIVWGREKGSVKIYK 449
++ + G G+ K Y
Sbjct: 777 TREKLQGAFSGTKKEYT 793
>gi|85716132|ref|ZP_01047108.1| Mce4/Rv3499c/MTV023.06c protein [Nitrobacter sp. Nb-311A]
gi|85697131|gb|EAQ35013.1| Mce4/Rv3499c/MTV023.06c protein [Nitrobacter sp. Nb-311A]
Length = 36
Score = 37.6 bits (84), Expect = 4.3, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 14/35 (40%)
Query: 62 GIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPS 96
GI VG + L L + P A + TP+
Sbjct: 2 GIRVGEVTELSLAPDDPRRVNAAIAVTSTTPVRAD 36
>gi|302389544|ref|YP_003825365.1| stage IV sporulation protein A [Thermosediminibacter oceani DSM
16646]
gi|302200172|gb|ADL07742.1| stage IV sporulation protein A [Thermosediminibacter oceani DSM
16646]
Length = 492
Score = 37.6 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 24/370 (6%), Positives = 100/370 (27%), Gaps = 9/370 (2%)
Query: 83 AKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPS 142
+ + + + + Y + + R F + A I
Sbjct: 81 VEITFKDNIKFRVRLVDNVGFSVKGALGYEDENGPRMVSTPWFDEEIPFQEAAEIGTRKV 140
Query: 143 GINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMH 202
+ T+ + + + + N S +
Sbjct: 141 IEEHSTIGVVVTTDGTITDIPRENYVDAEERVVNELKAIGKPFVIVLNSINPSSESTLEL 200
Query: 203 TTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVIN 262
++ + + +++ I + + ++ +
Sbjct: 201 KEELESKYDVPVLPLDCQAMTQKDIYALLEQILYEFPLMEINIHIPKWVEVLEKEHWLRQ 260
Query: 263 TVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR---SSISAIR 319
+ T + I+ +++D + + N+ T+++ +
Sbjct: 261 QFEKTVKETVKDIHRVRDIERIVTDLGASDFLERVEIKEMNLGTGTADLNLEAKKDLFYK 320
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI--SALKENNSLFKDAQRAMH 377
+++ I + + ++ +L + +++ ++ ++++ +
Sbjct: 321 VLSELSGLTIEGDHHLMSLMKDLTKAKKEYDKVAKALDDVKKVGYGIVPPQLDELTLEEP 380
Query: 378 TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI- 436
+ I +I ++ +I ++ +++ ++ FE +P+ I
Sbjct: 381 EIIRQGSRFGVRIRAIAPSIHMIRADIQTEISPIIGTEKQSEELISYLMSEFENDPEKIW 440
Query: 437 ---VWGREKG 443
++G+
Sbjct: 441 QTNIFGKSLQ 450
>gi|260582012|ref|ZP_05849807.1| DNA repair protein RecN [Haemophilus influenzae NT127]
gi|260094902|gb|EEW78795.1| DNA repair protein RecN [Haemophilus influenzae NT127]
Length = 558
Score = 37.6 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFKLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|219518698|gb|AAI45505.1| Pde4dip protein [Mus musculus]
Length = 2412
Score = 37.6 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 26/337 (7%), Positives = 87/337 (25%), Gaps = 13/337 (3%)
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
Q + P + A + S + E+
Sbjct: 10 CHHAPPPCWAHHAPRQSPRQPSSRERRPPERAGSWAVAAEEEEAASAAPCMRHYFGEDDG 69
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + T + +S + + + P L+ +
Sbjct: 70 EMVPRTSSAAAFLSDTKDRGPPVQSQTWRSAERVPFGQAHSLRAFEKPPLVQTQALRDFE 129
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
L + + ++++ + Q + + + E+ +++ L + + +
Sbjct: 130 KHLNDLKKENFSLKLRIYFLEERMQQKYEVSRE--DVYKRNIELKVEVESLKRELQDRKQ 187
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
+ + +S + + N I+ + + + E+
Sbjct: 188 HLDKTWADAEDLNSQNEAELRRQVEERQQETEHVYELLGNKIQLLQEEPRLAKNEATEME 247
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
+ + N L + A D + + + L +
Sbjct: 248 TLVEAEKRC--NLELSERWTNAAKNREDAAGDQEKP---------DQYSEALAQRDRRIE 296
Query: 414 KLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+L++++ + + + Q ++ E+ + +P
Sbjct: 297 ELRQSLAAQEGLVEQLSQEKQQLLHLLEEPASMEVQP 333
>gi|305662301|gb|ADM62266.1| DNA repair protein [Bisgaardia genomosp. 1]
Length = 450
Score = 37.6 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 20/180 (11%), Positives = 55/180 (30%), Gaps = 3/180 (1%)
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
+ + Q +D+ + +E+ +++ + +
Sbjct: 114 QFLIQINSQHASQQLLKNDHQLQLLDNFCAHDQLIKNMQESYRTWKDLQLQVKTFQQKCA 173
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
Q + ++ + + ++ L S + + L + +
Sbjct: 174 ENEAKKQLLQYQVEELDQFSLKENEYLELEEEHTRLSSSEELTALSQSALQLLSENESV- 232
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
K N+YI + QN+S + ++ + ++QE N N E++P +
Sbjct: 233 -NIDTLLYKTNQYINELCQLDQNYSGA-QKMLEEALIQIQEATNEIQHLSANIEQDPTRL 290
>gi|167761012|ref|ZP_02433139.1| hypothetical protein CLOSCI_03410 [Clostridium scindens ATCC 35704]
gi|167661391|gb|EDS05521.1| hypothetical protein CLOSCI_03410 [Clostridium scindens ATCC 35704]
Length = 263
Score = 37.6 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 34/111 (30%), Gaps = 13/111 (11%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYW-LSRSNQYDGPMAE---VIIRIPGSVDGLSTDS 56
M++K GL V+++ S ++ N +D V PG D +
Sbjct: 1 MKNKKLKAIAGLVAVAVIGGSLAYFNQTMTVENPFDTNKYSSELVETFNPGDGDDWQPGA 60
Query: 57 SVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
+V + +D + + +A ++ G+
Sbjct: 61 TVN---------KDIQVDNTGDYDVIVRVKFDETWTRKGGNSAYVKNTGIN 102
>gi|145630630|ref|ZP_01786409.1| DNA repair protein [Haemophilus influenzae R3021]
gi|144983756|gb|EDJ91206.1| DNA repair protein [Haemophilus influenzae R3021]
Length = 558
Score = 37.6 bits (84), Expect = 4.4, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFKLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|297709670|ref|XP_002831547.1| PREDICTED: dystrophin, partial [Pongo abelii]
Length = 1754
Score = 37.6 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 77/293 (26%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1013 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1072
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
++ + + +S + Q+V + + L
Sbjct: 1073 LVNDIQTIQPSLNSVNEGGQKMKNEAEPEFASRLETELKELNIQWDHMCQQVYARKEALK 1132
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ + ++
Sbjct: 1133 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQK 1189
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1190 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1249
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1250 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1302
>gi|168215318|ref|ZP_02640943.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
[Clostridium perfringens CPE str. F4969]
gi|170713296|gb|EDT25478.1| putative bacteriocin ABC transporter, bacteriocin-binding protein
[Clostridium perfringens CPE str. F4969]
Length = 500
Score = 37.6 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 39/402 (9%), Positives = 107/402 (26%), Gaps = 19/402 (4%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVR 59
MESK +F+ I+ W + ++ V+G + D+ ++
Sbjct: 18 MESKPNKLMF-IFLYIIIALIVTFFIW-----SWFSEKEIIV-----KVNGVVRPDNEIQ 66
Query: 60 -FNGIPVGRIVGLFL-DQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTL 117
+ I G + + + + E + I+ + + +
Sbjct: 67 AISNIVQGEVESIKMKNGESVSKGEVLFKIKSTELGDKKNQVEEQIKYINTDNENLEKLN 126
Query: 118 RKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLT 177
+ ++ S + E T+ S + +
Sbjct: 127 KSINDNTNYFENNDKEKEYYYKFQSYEAGNKVSLEETNNISSSKDNLNNEKDGLKILSKS 186
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ + ++ + + + + D
Sbjct: 187 ISENKNLNKEGSVYSSQYESYASSKAMIQNKTDQLENSKKALNEQIEANNKEKNNLSDEN 246
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHD----VRETTQTFQEVGQKIDHLLSDFSSKMK 293
I + + +N + ++ N +T + KI+ L+ S +
Sbjct: 247 SKAIIDDKNKQINNQISQIDLEIKNNNEQLDKLKSDTLAQIKGSIDKINQNLNKLESNLS 306
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
S + S+ + + T+ + I +++++ IE + + +L
Sbjct: 307 SLDESSNISKEKNKTTFLAQIEEKINMNNQKKKELEENKKQIEQSIEKCSVKAPSDGKLN 366
Query: 354 SKIN-NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIG 394
N + + ++ T+R + I +I
Sbjct: 367 INANLEKGVILQTGAIVASIIPNSDTYRVELMIPTKDIANIK 408
>gi|169826440|ref|YP_001696598.1| methyl-accepting chemotaxis protein [Lysinibacillus sphaericus
C3-41]
gi|168990928|gb|ACA38468.1| methyl-accepting chemotaxis protein [Lysinibacillus sphaericus
C3-41]
Length = 433
Score = 37.6 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 22/208 (10%), Positives = 71/208 (34%), Gaps = 17/208 (8%)
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLE 302
E++Q S+ + + T + +++D S ++ ++ ++ +
Sbjct: 241 AESMQKVSSEGYAKIVSINEQTGKIHHKTYEMASMVEQLDESSSKINAVVEMVKSISGQT 300
Query: 303 NIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL 362
N+ S + ++ + N + + S ++ AEL+ N I+A
Sbjct: 301 NLLALNSAIEAARAGEHGN-----GFAVVANEVRKLADQTKSSVEQIAELIQMSNGITAQ 355
Query: 363 --KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+ + + ++ ++ + + S+ +++ NF ++ + L +
Sbjct: 356 VVQAIQDIQELVNNSIERNAESLKAFDAISTSVEDSITNF-----QNVGKQISDLANIIE 410
Query: 421 HFDDCLNNFERNPQDIVWGREKGSVKIY 448
ER + +++ +
Sbjct: 411 TIGASSEELERVANRL-----NTTIREF 433
>gi|118464466|ref|YP_879402.1| mce related protein [Mycobacterium avium 104]
gi|118165753|gb|ABK66650.1| mce related protein [Mycobacterium avium 104]
Length = 410
Score = 37.6 bits (84), Expect = 4.5, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +++ L + V+ G VG++ + ++ I
Sbjct: 36 GIGSGGYLLNAVFSNALN-LPAHAKVKLAGADVGQLESM---VARNYTAVTTLRIMDGVR 91
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRK 119
+ +TA +R+ G ++ +
Sbjct: 92 VPVGSTAELRSATPLGDVFVAIKPPVP 118
>gi|254773152|ref|ZP_05214668.1| mce related protein [Mycobacterium avium subsp. avium ATCC 25291]
Length = 410
Score = 37.6 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +++ L + V+ G VG++ + ++ I
Sbjct: 36 GIGSGGYLLNAVFSNALN-LPAHAKVKLAGADVGQLESM---VARNYTAVTTLRIMDGVR 91
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRK 119
+ +TA +R+ G ++ +
Sbjct: 92 VPVGSTAELRSATPLGDVFVAIKPPVP 118
>gi|41406210|ref|NP_959046.1| hypothetical protein MAP0112 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41394558|gb|AAS02429.1| hypothetical protein MAP_0112 [Mycobacterium avium subsp.
paratuberculosis K-10]
Length = 410
Score = 37.6 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 10/87 (11%), Positives = 28/87 (32%), Gaps = 4/87 (4%)
Query: 33 QYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTP 92
+ +++ L + V+ G VG++ + ++ I
Sbjct: 36 GIGSGGYLLNAVFSNALN-LPAHAKVKLAGADVGQLESM---VARNYTAVTTLRIMDGVR 91
Query: 93 LYPSTTATIRTQGLAGITYIELSTLRK 119
+ +TA +R+ G ++ +
Sbjct: 92 VPVGSTAELRSATPLGDVFVAIKPPVP 118
>gi|242876556|gb|ACS94027.1| recombination protein [Pasteurellaceae bacterium DD1]
Length = 439
Score = 37.6 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 26/230 (11%), Positives = 76/230 (33%), Gaps = 12/230 (5%)
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
T + + D + +++ + Q + + + +Q
Sbjct: 60 RWLTDHELQDQDNPEECILRRLVNQDGRSKAFINNTPVSASQLKEFGQYLVHINGQHASQ 119
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ ++ L S + ++ N + S +++ E ++Q + +
Sbjct: 120 LLLKNDFQLQALDSFCAHNHLLEQMKTDYLNWKELQSQVKTFNQKCVENEAKKQLLQYQV 179
Query: 333 NTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPS 392
N ++ N+ EL + +S ++ L + + + ++ +
Sbjct: 180 NELDEFNLRPNEY----QELEEEQRRLSNSEQLTQLSQSVLQILTENETV--NVDSLLYR 233
Query: 393 IGNNLQNFSQSGLN--DIQNLVRKL----QETVNHFDDCLNNFERNPQDI 436
+L++ ++ D Q L+++ QE + N E++PQ +
Sbjct: 234 TTQHLEDLAELDTRYVDAQTLLQEALIQVQEAASEIQHLSANIEQDPQVL 283
>gi|288940720|ref|YP_003442960.1| phenylalanyl-tRNA synthetase subunit beta [Allochromatium vinosum
DSM 180]
gi|288896092|gb|ADC61928.1| phenylalanyl-tRNA synthetase, beta subunit [Allochromatium
vinosum DSM 180]
Length = 792
Score = 37.6 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 1/45 (2%)
Query: 49 VDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPL 93
VD + + V F+G+ +G ++ + + + + D PL
Sbjct: 32 VDAVEPAAPV-FSGVKIGHVLSVEPHPDAAKLRVCSVDVGEDAPL 75
>gi|145636724|ref|ZP_01792390.1| DNA repair protein RecN [Haemophilus influenzae PittHH]
gi|145270022|gb|EDK09959.1| DNA repair protein RecN [Haemophilus influenzae PittHH]
Length = 558
Score = 37.6 bits (84), Expect = 4.6, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 77/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + + +
Sbjct: 193 LQYQVDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDNL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|281419994|ref|ZP_06250993.1| DNA repair protein RecN [Prevotella copri DSM 18205]
gi|281405794|gb|EFB36474.1| DNA repair protein RecN [Prevotella copri DSM 18205]
Length = 557
Score = 37.2 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 15/236 (6%), Positives = 51/236 (21%), Gaps = 13/236 (5%)
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
M +L + D + + + +
Sbjct: 75 MQDFFDANDIDYDAEDTIIRRELTAAGKSRAFINDTPVPLSKMRELGEQLVDIHSQHQNL 134
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
+ D + + +K K + + + +
Sbjct: 135 LLQKEDFQLSVVDIIAHDEKQKKAYLAEYKNYKKAKQQLEDLKAEIAKNRENEEFMRFQF 194
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFR 380
+ + S+ + + +N + ++ +
Sbjct: 195 KELDDANLQEGELEQLEQEAETLSHSEDIKTALYEADNALSGED-----GSILDKLKNAA 249
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ I P + + +Q+ +L++ ++N E +P +
Sbjct: 250 QQIDNIKEVYPDVKEVAER--------MQSSYIELKDIAQEISGSVDNIEFDPNRL 297
>gi|149636870|ref|XP_001510647.1| PREDICTED: similar to Golgi autoantigen, golgin subfamily a, 5
[Ornithorhynchus anatinus]
Length = 614
Score = 37.2 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 23/241 (9%), Positives = 69/241 (28%), Gaps = 12/241 (4%)
Query: 209 HSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVR 268
++ +T T+ + +L I Q + + +
Sbjct: 308 RLQEADQLLSTRTEALETLQNEKSRIMQDHSEGSSLQNQALQTLQERLHEADCTLKREQD 367
Query: 269 ETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKI 328
+ E +++ + + + ++ + D ++ +
Sbjct: 368 SYQKMQSEFAARLNKM--EVERQNLAEAVTVAERKYMDEKRRADDLQQQVKIARSNMESS 425
Query: 329 ISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINR 388
+ + + + S +K + + + L + + + H E+I +
Sbjct: 426 KQELIDYKQKATRILQSKEKLISSLKEGSGFEDLGNITASNLELEELRHEKELQREEIQK 485
Query: 389 YIPSIGN---NLQNFSQSGLNDIQNLVRKLQETVNHF-------DDCLNNFERNPQDIVW 438
+ I LQ+ +++ ++ +L+E + ER Q V+
Sbjct: 486 LLGQIQQLRTELQDMESQLVSEAESSREQLRELHEQIAGQKTTKQELEAELERQKQIYVF 545
Query: 439 G 439
G
Sbjct: 546 G 546
>gi|30846|emb|CAA32479.1| unnamed protein product [Homo sapiens]
Length = 3685
Score = 37.2 bits (83), Expect = 4.8, Method: Composition-based stats.
Identities = 23/293 (7%), Positives = 75/293 (25%), Gaps = 25/293 (8%)
Query: 166 QKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLIT 225
+++E+ +K + + + + + + P DS+ +
Sbjct: 1034 SQLVEHCQKLEEQMNKLRKIQNHIQTLKKWMAEVDVFLKEEWPALGDSEILKKQLKQCRL 1093
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
+ + + +S + Q+V + + L
Sbjct: 1094 LVSDIQTIQPSLNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALK 1153
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ ++ + + + ++ ++
Sbjct: 1154 GGLEKTVSLQKDLSEMHEW---MTQAEEEYLERDFEYKTPDELQKAFEEMKRAKEEAQQK 1210
Query: 346 SQKFAELMSKINNISALK---ENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQ---- 398
K L +N++ A +L K+ + ++ ++N ++
Sbjct: 1211 EAKVKLLTESVNSVIAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHE 1270
Query: 399 ---------------NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
F +I ++ E ++ ++ + + E NP I
Sbjct: 1271 LLSYLEKANKWLNEVEFKLKTTENIPGGAEEISEVLDSLENLMRHSEDNPNQI 1323
>gi|27377657|ref|NP_769186.1| chemotaxis protein [Bradyrhizobium japonicum USDA 110]
gi|27350802|dbj|BAC47811.1| blr2546 [Bradyrhizobium japonicum USDA 110]
Length = 606
Score = 37.2 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 22/243 (9%), Positives = 73/243 (30%), Gaps = 18/243 (7%)
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ + + + N+Q ++ + S + V+E+ + E +
Sbjct: 362 TSTAERTQQLTTVVAAASEEASTNVQSVASATEELSSSITEISRQVQESARVASEAVGQA 421
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSN-----MRSSISAIREITDQRQKIISTINTIE 336
S K+ + + ++ + ++ + + + ++
Sbjct: 422 RTTTERVSELSKAATRIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVK 481
Query: 337 NITSNLNDSSQKFAELMSKIN-----NISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ ++ + + ++ I ++ A+++ + + T E+
Sbjct: 482 ALAEQTAKATGEIGQQIASIQTATEHSVGAIRDISDTIEKLSEISSTIAAAVEEQGAATQ 541
Query: 392 SIGNNLQNFSQ------SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GREKG 443
I N+Q +Q S + D+Q + + + + GR
Sbjct: 542 EISRNVQQAAQGTHQVSSNITDVQRGASETGSASSQVLSAAQMLSGDSNRLKLEVGRFLE 601
Query: 444 SVK 446
+V+
Sbjct: 602 TVR 604
>gi|47213344|emb|CAF92967.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1881
Score = 37.2 bits (83), Expect = 4.9, Method: Composition-based stats.
Identities = 27/294 (9%), Positives = 93/294 (31%), Gaps = 10/294 (3%)
Query: 147 FISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ AE+ +++ + ++ + ++ E + +
Sbjct: 1263 YKQQAEDLRRQLDEEAKAKSALAHAVQSARHDCDLLREQLEEEQEAKAELQRALSRANAE 1322
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
+ K LQ+ + +E S++ K+ ++ + D
Sbjct: 1323 VSTWRSRYESDGIQRAEELEEAKKKLVQRLQEAEEAVEAANAKSSSLEKTKQRLQAEMED 1382
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ + +D K ++ F E+ + ++ + + S E+ +
Sbjct: 1383 LMVDLERSNAASAALDK-KQRLFDKTLAEWKQKFEESQCELEASQKEARSLSTELFKLKN 1441
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI 386
+ +E + + ++ +EL ++ E + ++A ++
Sbjct: 1442 AYEECLEHLETMKRENKNLQEEISELSEQL------GEGGRSAHELEKARKQLEQERAEL 1495
Query: 387 NRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ +L++ L ++ + ++ ++ D+ + +RN Q ++
Sbjct: 1496 QAALEEAEGSLEHEESKILQSQLELNQVKADVERKLSEKDEEMEQAKRNYQRVL 1549
>gi|260221772|emb|CBA30670.1| hypothetical protein Csp_C24710 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 623
Score = 37.2 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 47/435 (10%), Positives = 109/435 (25%), Gaps = 19/435 (4%)
Query: 6 YYTSVGLFVVSILFF-SFFSIYWLSRSNQYDGPMAEVIIRIPGSVD-----GLSTDSSVR 59
VGL V+ + + + A++ GLS +SV
Sbjct: 105 TPVLVGLLVMLGMLGTFLGMVMTFKGAVFALEGSADLQAIRAALAAPIKGLGLSFGTSV- 163
Query: 60 FNGIP----VGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
G+ +G + L + R T L P T A R GL +
Sbjct: 164 -AGVATSALLGLVSA--LCRRERLQVTRLLDTRIATVLRPFTLAHQREAGLLAQQQQVQA 220
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
++ + + + A+ ++ Q + +++
Sbjct: 221 LPAVAEQLSRLMEQIEQRNLALNTRLEAQQQAFH-ADVGRAYTGLATAVGQSLQDSLLAG 279
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
T I + + + HT + + + +L
Sbjct: 280 AKQTSEAIVPVMESALQQLVAETRQQHTQMREALQAQLQGVQAAFHEGTHTLTADWARAL 339
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETT--QTFQEVGQKIDHLLSDFSSKMK 293
+ + Q + + + T+ T T + I + +
Sbjct: 340 NESTASLQTEWQRAGEHAQAQQQALARTLEANVATITEHTASQASAAIAGMARVLTQSEA 399
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
E R T E + +++ + + M
Sbjct: 400 LVAAQQQAEATWAEQQQARMDQLTALWRTGLNDLRAEEAARSEATATRISELTLQLRTGM 459
Query: 354 SKINN--ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL 411
+++ AL+E L + + + T++ I ++ N +
Sbjct: 460 GQLDERDTLALQERQQLMERLHGVLQSAEITTQGQRAAIDTLVANTGHTLLQVQEQFSQT 519
Query: 412 VRKLQETVNHFDDCL 426
+ + +H +
Sbjct: 520 LALQADKADHLAAQV 534
>gi|304412441|ref|ZP_07394048.1| Peptidase M23 [Shewanella baltica OS183]
gi|307305785|ref|ZP_07585531.1| Peptidase M23 [Shewanella baltica BA175]
gi|304349276|gb|EFM13687.1| Peptidase M23 [Shewanella baltica OS183]
gi|306911278|gb|EFN41704.1| Peptidase M23 [Shewanella baltica BA175]
Length = 377
Score = 37.2 bits (83), Expect = 5.0, Method: Composition-based stats.
Identities = 20/187 (10%), Positives = 58/187 (31%), Gaps = 10/187 (5%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
+ + + ++ + + S++ + ++ + + +
Sbjct: 77 NSTKNSLAQIDTKLTELKQRQDELETLKVSQQ-QTLSKQLSSAYLAGNHDYTKMMLNQQS 135
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNI-----SALKENNSLFKDAQRAMHTF 379
I + + + S + + +++++ I S K+ L + Q
Sbjct: 136 PATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQTSKQKQLTKLVAEQQVQAKRL 195
Query: 380 RDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ I + L + L +Q L+ V L + NP +G
Sbjct: 196 SQEQDQRQLTIKELQRTLNSKGAE-LEQLQIEEASLKRVVEQ---ALRAMKDNPSMEGFG 251
Query: 440 REKGSVK 446
++ G +K
Sbjct: 252 KQSGKLK 258
>gi|301619362|ref|XP_002939062.1| PREDICTED: myosin-6 [Xenopus (Silurana) tropicalis]
Length = 1937
Score = 37.2 bits (83), Expect = 5.1, Method: Composition-based stats.
Identities = 28/295 (9%), Positives = 90/295 (30%), Gaps = 13/295 (4%)
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + Q++ + + + A + + + ++ +
Sbjct: 1300 QMTRGKQTYSQQLEDLKRQLEEESKAKNALAHGLQSARHDCDLLREQYEEEQEAKAELQR 1359
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ + + +Q+ ++ E + + ++ + V +T
Sbjct: 1360 ILSKANAEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKH 1419
Query: 276 EVGQKIDHLLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI-- 332
+ +I+ L+ D S + N + + + + QK ++
Sbjct: 1420 RLQNEIEDLMVDLERSNAAAAALDKKQRNFDKVLAEWKQKFEESQTELESSQKDARSLST 1479
Query: 333 ------NTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEK 385
N E +L ++ L +I++++ L E + ++ +
Sbjct: 1480 ELFKLKNAYEESLEHLETFKRENKNLQEEISDLTEQLGEGGKSIHELEKIRKQLEQEKME 1539
Query: 386 INRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ + +L++ L + L ++ + D+ + +RN Q +V
Sbjct: 1540 LQTALEEAEASLEHEEGKILRAQLEFNQLKSEIDRKLAEKDEEMEQVKRNNQRLV 1594
>gi|91976334|ref|YP_568993.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5]
gi|91682790|gb|ABE39092.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris BisB5]
Length = 563
Score = 37.2 bits (83), Expect = 5.2, Method: Composition-based stats.
Identities = 19/243 (7%), Positives = 70/243 (28%), Gaps = 18/243 (7%)
Query: 222 DLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKI 281
+ I + + N+Q ++ + + V V+++ + E ++
Sbjct: 319 SSTAEHSQEITTLVASASEEASNNVQSVASATEEMASSVNEISRQVQDSARIANEAVEQA 378
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSN-----MRSSISAIREITDQRQKIISTINTIE 336
++ + + ++ + ++ + + + ++
Sbjct: 379 RRTNDRVGELAQAATRIGDVVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVASEVK 438
Query: 337 NITSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIP 391
+ ++ + ++ ++ I +++ A+K+ + T E+
Sbjct: 439 ALAEQTAKATGEISQQITGIQAATQDSVGAIKDIGDIIGRMSEIASTIASAVEEQGAATQ 498
Query: 392 SIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFDDCLNNFERNPQDIVW--GREKG 443
I N+Q + D+Q + + + G+
Sbjct: 499 EIARNVQQAALGTQQVSANIVDVQRGASESTAASTQVLSAAKSLSTESNRLKLEVGQFLD 558
Query: 444 SVK 446
SV+
Sbjct: 559 SVR 561
>gi|152998597|ref|YP_001364278.1| peptidase M23B [Shewanella baltica OS185]
gi|151363215|gb|ABS06215.1| peptidase M23B [Shewanella baltica OS185]
Length = 362
Score = 37.2 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 17/187 (9%), Positives = 58/187 (31%), Gaps = 10/187 (5%)
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
+ + + ++ + + S++ + ++ + + +
Sbjct: 62 NSTKNSLAQIDTKLTELKQRQDELETLKVSQQ-QTLSKQLSSAYLAGNHDYTKMMLNQQS 120
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNI-----SALKENNSLFKDAQRAMHTF 379
I + + + S + + +++++ I S K+ L + Q
Sbjct: 121 PATIERMLAYYQYLNKARMKSINELKQTLTELDEIKVSQTSKQKQLTKLVAEQQVQAKRL 180
Query: 380 RDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
++ I + L + +++ L + + L + NP +G
Sbjct: 181 SQEQDQRQLTIKELQRTLNSKGA----ELEQLQIEEASLKRVVEQALRAMKDNPSMEGFG 236
Query: 440 REKGSVK 446
++ G +K
Sbjct: 237 KQSGKLK 243
>gi|319648684|ref|ZP_08002895.1| hypothetical protein HMPREF1012_03934 [Bacillus sp. BT1B_CT2]
gi|317389103|gb|EFV69919.1| hypothetical protein HMPREF1012_03934 [Bacillus sp. BT1B_CT2]
Length = 1039
Score = 37.2 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 63/193 (32%), Gaps = 11/193 (5%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
+ + I + V + + VG+ + L + +K + + + + +
Sbjct: 437 EKISRAIEQTNGVSKVRSATRPVGKGLSDLYVKTQANELNKGLESGNKGLKKIKDGLAEA 496
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL--KENNSLFKDA 372
+I + Q + IN + T ++ M K+ + + K+
Sbjct: 497 SKSIADQKPQIEASGKGINQLIKGTESIQAGISDVEANMRKLKEGTDQSKQGVAQAKKEI 556
Query: 373 QRAMHTFRDTSEKINRYIP---SIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFD 423
Q A +++N I I L+ N D+Q ++ + + + +
Sbjct: 557 QTAKKQLTAQVDQLNGQIETYKEISKILKAALSQAENAQGITADVQKMIEQTNQNFKNLE 616
Query: 424 DCLNNFERNPQDI 436
+ + NP +
Sbjct: 617 SEIPEVKENPSYL 629
>gi|254568120|ref|XP_002491170.1| hypothetical protein [Pichia pastoris GS115]
gi|238030967|emb|CAY68890.1| Hypothetical protein PAS_chr2-1_0276 [Pichia pastoris GS115]
gi|328352309|emb|CCA38708.1| Coiled-coil domain-containing protein 67 [Pichia pastoris CBS 7435]
Length = 746
Score = 37.2 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 34/283 (12%), Positives = 79/283 (27%), Gaps = 7/283 (2%)
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
+K T + N ++ + A + + K N D + +
Sbjct: 406 YQKKFETDSAHNESVLAELNAKKSLIDQNLEKIQAQSREIEQLKEIHNDHLDDSSKEIQS 465
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
K + Q+ +Q + ++ + + E D L S +
Sbjct: 466 WKEKVKEITEQLDTQLQHRDQLLQDAEAEIKKLKATQEKLEGSLNESLNNADSLRSQLAD 525
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+ K + ++ I + + E++ S + K
Sbjct: 526 LVNEKAQQQSQFESLEQNVESLKKELQVKSIELDSYETNNK-ELKESLESLETRYNSKLE 584
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQN 410
SKIN + ++ +++ + + I + L Q
Sbjct: 585 SQSSKINELETSQQ-----DKLTELEESYKISMAQKEERIKELEKQLVEKQTFFSTGAQK 639
Query: 411 -LVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKPKH 452
LV +LQ+ ++ L+ + + + + Y KH
Sbjct: 640 GLVSELQQKIDDLQRELSTHDEQAEQKLQQLAQDLYVQYSAKH 682
>gi|52079012|ref|YP_077803.1| hypothetical protein BL02211 [Bacillus licheniformis ATCC 14580]
gi|52784384|ref|YP_090213.1| YdgH [Bacillus licheniformis ATCC 14580]
gi|52002223|gb|AAU22165.1| hypothetical protein BL02211 [Bacillus licheniformis ATCC 14580]
gi|52346886|gb|AAU39520.1| YdgH [Bacillus licheniformis ATCC 14580]
Length = 1039
Score = 37.2 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 25/193 (12%), Positives = 63/193 (32%), Gaps = 11/193 (5%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSS 314
+ + I + V + + VG+ + L + +K + + + + +
Sbjct: 437 EKISRAIEQTNGVSKVRSATRPVGKGLSDLYVKTQANELNKGLESGNKGLKKIKDGLAEA 496
Query: 315 ISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISAL--KENNSLFKDA 372
+I + Q + IN + T ++ M K+ + + K+
Sbjct: 497 SKSIADQKPQIEASGKGINQLIKGTESIQAGISDVEANMRKLKEGTDQSKQGVAQAKKEI 556
Query: 373 QRAMHTFRDTSEKINRYIP---SIGNNLQNFSQSGLN------DIQNLVRKLQETVNHFD 423
Q A +++N I I L+ N D+Q ++ + + + +
Sbjct: 557 QTAKKQLTAQVDQLNGQIETYKEISKILKAALSQAENAQGITADVQKMIEQTNQNFKNLE 616
Query: 424 DCLNNFERNPQDI 436
+ + NP +
Sbjct: 617 SEIPEVKENPSYL 629
>gi|326430507|gb|EGD76077.1| hypothetical protein PTSG_00784 [Salpingoeca sp. ATCC 50818]
Length = 1027
Score = 37.2 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 42/408 (10%), Positives = 106/408 (25%), Gaps = 26/408 (6%)
Query: 67 RIVGLFLDQEYPNHS----LAKALIRPDTPLYPSTTAT---IRTQGLAGITYIELSTLRK 119
R+ L + E + A + + + ST AT + TQ + +
Sbjct: 475 RVEALEQEAEQRESAWKEKEATWAAQWEERVRESTQATARDVETQTAGWQQKVADLQAQL 534
Query: 120 EKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTT 179
+ + + + E ++ +Q I +T
Sbjct: 535 AAAEQRLQGQDAKHQQDRDQLMAVHEDQRTALEQEISQLQQQLETVQADTSAIVSEVTAA 594
Query: 180 IANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKV 239
+ + D + + T + D +
Sbjct: 595 LETANSEKQDALARAQRSDDALAHLKQTHEQVLHEKQALEADLHAQGDDTSALHEQVATF 654
Query: 240 NQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSA 299
Q L +Q + + + +++V V + + +E + + L ++ + K + +
Sbjct: 655 KQSLSTLQTINADLQQKAERVSGLESTVADLHRQLEETRARANVLQAEAAKKDEELTATR 714
Query: 300 FLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI 359
A + + + + ++ + + Q L+ +
Sbjct: 715 DKGAQALADAKAKHARKMKEAKESNAAQVQRLTRERDEAVKAREELEQT--RLLQSAAAL 772
Query: 360 SALKENNSLFKDAQRAMHTFRDTSEKINR-----------------YIPSIGNNLQNFSQ 402
SA ++ + Q + E + + + +
Sbjct: 773 SAQRDLQVKLEAEQAQAAALKKELEDVQGEQSSLAAKLAAAEGEVSALQATVRERNASEE 832
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ +V +Q + ER + EKG+V KP
Sbjct: 833 QLEEQVSAMVVHVQTQKREIEALEATLERVLSRLDEAVEKGAVAPLKP 880
>gi|323694569|ref|ZP_08108735.1| hypothetical protein HMPREF9475_03599 [Clostridium symbiosum
WAL-14673]
gi|323501337|gb|EGB17233.1| hypothetical protein HMPREF9475_03599 [Clostridium symbiosum
WAL-14673]
Length = 869
Score = 37.2 bits (83), Expect = 5.3, Method: Composition-based stats.
Identities = 23/228 (10%), Positives = 70/228 (30%), Gaps = 12/228 (5%)
Query: 223 LITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKID 282
++ M +++ + + + + + S +Q++ ++ ++ + +D
Sbjct: 220 MMMVPGTMDALNNIKDLKEAKDTWREDGDKMYDSMNQLLRSMEAMKMDVTQVKGGLNSLD 279
Query: 283 HLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL 342
+ K E + + D S + I + R + ++ I + +
Sbjct: 280 DARGQINGNRKQIEAL-STQALNDLASVTEQTSRVIPYLETARNAVTDINANMDAIYNTM 338
Query: 343 NDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
D+ + L ++ + S + + I++ I L
Sbjct: 339 EDTQDELDRLYDRLGGLKNSLNTMSDRIGKGITEEEQKQLAAAISQQTAEIQQIL----- 393
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYKP 450
+ L +L + + ++ ER + + + KP
Sbjct: 394 ------EALAGQLGGSSGAYGLASDDLERLEESLKSADSFRYNRKKKP 435
>gi|193785803|dbj|BAG51238.1| unnamed protein product [Homo sapiens]
Length = 547
Score = 37.2 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 115 LSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLV 174
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F+ D++ L+ + T D
Sbjct: 175 AMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERT---LDR 231
Query: 425 CLNNFERNPQDIVWG 439
L++ E++P ++ G
Sbjct: 232 LLDSMEQDPGALLLG 246
>gi|7662354|ref|NP_055755.1| vacuolar fusion protein MON1 homolog B [Homo sapiens]
gi|74738536|sp|Q7L1V2|MON1B_HUMAN RecName: Full=Vacuolar fusion protein MON1 homolog B; AltName:
Full=HSV-1 stimulation-related gene 1 protein; AltName:
Full=HSV-I stimulating-related protein
gi|17064170|gb|AAL35292.1|AF442486_1 HSV-I stimulating-related protein [Homo sapiens]
gi|18999429|gb|AAH24277.1| MON1 homolog B (yeast) [Homo sapiens]
gi|119616014|gb|EAW95608.1| MON1 homolog B (yeast), isoform CRA_b [Homo sapiens]
gi|208965252|dbj|BAG72640.1| MON1 homolog B [synthetic construct]
Length = 547
Score = 37.2 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 115 LSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLV 174
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F+ D++ L+ + T D
Sbjct: 175 AMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERT---LDR 231
Query: 425 CLNNFERNPQDIVWG 439
L++ E++P ++ G
Sbjct: 232 LLDSMEQDPGALLLG 246
>gi|40788967|dbj|BAA74895.2| KIAA0872 protein [Homo sapiens]
Length = 552
Score = 37.2 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 17/135 (12%), Positives = 49/135 (36%), Gaps = 9/135 (6%)
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + I + + +T+ + + S + + + ++ + + L++ L
Sbjct: 120 LSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDAIRAIYAEDHKLVFLQQGPLLLV 179
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVNHFDD 424
R + ++ I + L F+ D++ L+ + T D
Sbjct: 180 AMSRTSQSAAQLRGELLAVHAQIVSTLTRASVARIFAHKQNYDLRRLLAGSERT---LDR 236
Query: 425 CLNNFERNPQDIVWG 439
L++ E++P ++ G
Sbjct: 237 LLDSMEQDPGALLLG 251
>gi|126176514|ref|YP_001052663.1| peptidase M23B [Shewanella baltica OS155]
gi|125999719|gb|ABN63794.1| peptidase M23B [Shewanella baltica OS155]
Length = 362
Score = 37.2 bits (83), Expect = 5.4, Method: Composition-based stats.
Identities = 23/225 (10%), Positives = 66/225 (29%), Gaps = 15/225 (6%)
Query: 233 AIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKM 292
+ + L+N + + + + + +ID L + +
Sbjct: 23 QTQINQQQSALKNTSKQREKLLSLLRSDEEAIASAAKKVNSTKNSLAQIDTKLIELKQRQ 82
Query: 293 KSKET------SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSS 346
ET + ++ + + + I + + + S
Sbjct: 83 DELETLKVSQQQTLSKQLSSAYLAGNHDYTKMMLNQQSPATIERMLAYYQYLNKARMKSI 142
Query: 347 QKFAELMSKINNI-----SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ + +++++ I S K+ L + Q ++ I + L +
Sbjct: 143 NELKQTLTELDEIKVSQTSKQKQLTKLVAEQQVQAKRLSQEQDQRQLTIKELQRTLNSKG 202
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+++ L + + L + NP +G++ G +K
Sbjct: 203 A----ELEQLQIEEASLKRVVEQALRAMKDNPSMEGFGKQSGKLK 243
>gi|322388185|ref|ZP_08061789.1| septation ring formation regulator EzrA [Streptococcus infantis
ATCC 700779]
gi|321140857|gb|EFX36358.1| septation ring formation regulator EzrA [Streptococcus infantis
ATCC 700779]
Length = 575
Score = 37.2 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 49/457 (10%), Positives = 126/457 (27%), Gaps = 41/457 (8%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T +G+ V+ ++ F+ + ++ + L + V
Sbjct: 9 TLIGIAVLLLIAFAVAILLRKRNESRLVALEEKKEELYN-----LPVNDEVEV------- 56
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L + + + L ++ A I Y K K I QI
Sbjct: 57 VKNMHLIGQS--QVAFREWNQKWVDLSLNSFADIENNLFEAEGYNNSFRFLKAKHQIDQI 114
Query: 128 A-----TERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
E + A+ A N+ + + + E+ EK
Sbjct: 115 ESQIQLVEEDIAAIRNALSELEKQESKNSGRVLHALDLFEKLQNTVAEDPEKYGQALPEI 174
Query: 183 IETISTVLANNISHIDKM-------------MHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ + + + + + + + +T L T L +
Sbjct: 175 EKQLENIQSEFSQFVTLNSSGDPVEAAGILDNAENHILALTHIVERIPAIVTKLTTELPE 234
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
++ ++ + EN + + + + E +T + + ++
Sbjct: 235 QLEDLEAGYRKLLDENYHFVETDIESRLQLLYEALKNNHENIRTLELDNAEYENTQIQEE 294
Query: 290 SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKF 349
+ + + + + ++ + + Q ++ I + +
Sbjct: 295 INALYDIFTREIAAHKAFEKLVTTLPTYLKHLKENNQVLVKDIERLGKTYLISESDVNRV 354
Query: 350 AELMSKINNISAL-KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN---LQNFSQSGL 405
L + I+ ++A +E + A ++ E + + I +N +
Sbjct: 355 RRLQADISALNATIEEMTHAESEVSEAYSVLQERLENLQSTLKDIEDNQIGVSERLVQIE 414
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERN-----PQDIV 437
D N +K VN E+ PQ +
Sbjct: 415 KDDINARQKANVYVNRLHTIKRYMEKRNLPGIPQKFL 451
>gi|20094127|ref|NP_613974.1| SMC1-family ATPase [Methanopyrus kandleri AV19]
gi|49036452|sp|Q8TXI4|RAD50_METKA RecName: Full=DNA double-strand break repair rad50 ATPase
gi|19887131|gb|AAM01904.1| SMC1-family ATPase involved in DNA repair [Methanopyrus kandleri
AV19]
Length = 876
Score = 37.2 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 15/131 (11%), Positives = 46/131 (35%), Gaps = 2/131 (1%)
Query: 308 TSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNS 367
+R + +E+ +++ ++ + + + ++ EL L+
Sbjct: 188 RERVRDLKGSKKELKRVERELEELKREVKELEPEVEELKERLNELREAKREFERLEGELR 247
Query: 368 LFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ--SGLNDIQNLVRKLQETVNHFDDC 425
L ++ ++ RD K+ LQ S + +++N +L+ + +
Sbjct: 248 LLENKIESLKGRRDDLRKLVEEGKEAERELQRLGDVPSKVRELENEEAELRRRIEELRNL 307
Query: 426 LNNFERNPQDI 436
L++ +
Sbjct: 308 LDDLRSLRNRL 318
>gi|755771|emb|CAA88724.1| myosin heavy chain [Oncorhynchus mykiss]
Length = 698
Score = 37.2 bits (83), Expect = 5.5, Method: Composition-based stats.
Identities = 36/296 (12%), Positives = 87/296 (29%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
F E + I + + + ++ E M
Sbjct: 69 QAFTQQVEELKRAIEEEVKAKNALAHGVQSARHDCDLLREQFEEEQEAKAELQRGMSKAN 128
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + K+ ++ V
Sbjct: 129 SEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEETIEATNSKCASLEKTKQRLQGEV 188
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F ++ + E A+ + + S E+
Sbjct: 189 EDLMIDVERANALAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQKEARSMSTELFKM 247
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ +EL +I E + ++A T
Sbjct: 248 KNSYEEALDHLETLKRENKNLQQEISELTEQI------GETGKSIHELEKAKKTVETEKS 301
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q +V
Sbjct: 302 EIQTALEEAEGTLEHEESKILRVQLELNQIKGEVDRKIAEKDEEMEQIKRNSQRVV 357
>gi|256004652|ref|ZP_05429629.1| methyl-accepting chemotaxis sensory transducer [Clostridium
thermocellum DSM 2360]
gi|255991387|gb|EEU01492.1| methyl-accepting chemotaxis sensory transducer [Clostridium
thermocellum DSM 2360]
gi|316941257|gb|ADU75291.1| methyl-accepting chemotaxis sensory transducer [Clostridium
thermocellum DSM 1313]
Length = 604
Score = 37.2 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 33/431 (7%), Positives = 105/431 (24%), Gaps = 31/431 (7%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+G F++ + + + +VD L
Sbjct: 13 RIIIGFFIIVAIACIIGVV----GIQNLKNVQDSYALDYESTVDALE------------- 55
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + L + +I
Sbjct: 56 YVERIS---SHFQQIRVNV---FGFALSYDSDEKREYYTERIAEHINTVDESINGYREIL 109
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ ++ I ++ K+ + + E +
Sbjct: 110 SKYDASEVETEMKLLDNIQAALNEFGVLRNKMMNDLQTGLISREEFVSSFSKGGEAHNLA 169
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S V ID + + K + L+ + + L I I
Sbjct: 170 SNVDNAIQELIDYNIDYAANQISKN--KKQADNSIGLMVMVIAVGAVFALVLGLIISNGI 227
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
V ++ ++ D+ + E G+ +D + S K + +
Sbjct: 228 SKPITKVVAAAGKLAEGDMDITFDINSKDETGKLVDAFRNLVESTKKQAFIVEKIADGDL 287
Query: 307 STSNM--RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN--NISAL 362
+ +++++ I + I I + ++ +++ ++ ++
Sbjct: 288 TVDVPIRSQKDLLGQKLSEMVHNINNLIMNIASAAEQVSAGARQISDSSMALSQGATEQA 347
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRY--IPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
L + + ++ N+ + + ++ + ++ E+ N
Sbjct: 348 SSIEELSASIEEVASKTKINADNANQANDLAEKAKTFALTGNDHMQEMLKAMDEINESSN 407
Query: 421 HFDDCLNNFER 431
+ + + +
Sbjct: 408 NINKIIKVIDD 418
>gi|255321129|ref|ZP_05362295.1| preprotein translocase, YajC subunit [Acinetobacter radioresistens
SK82]
gi|262380182|ref|ZP_06073337.1| preprotein translocase subunit [Acinetobacter radioresistens SH164]
gi|255301683|gb|EET80934.1| preprotein translocase, YajC subunit [Acinetobacter radioresistens
SK82]
gi|262298376|gb|EEY86290.1| preprotein translocase subunit [Acinetobacter radioresistens SH164]
Length = 109
Score = 37.2 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 13/94 (13%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGL 71
L ++++ F+ + W ++ + V+ L S V F G +GRI L
Sbjct: 24 LLMIAVFIAIFYFLIWRPQAKRAKEHRTL--------VESLGVGSEVVFAGGLMGRITKL 75
Query: 72 FLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
D ++ + D + ++ ++ +G
Sbjct: 76 EGD-----FAVVELSRGVDVKIQRASVISVLPEG 104
>gi|281418163|ref|ZP_06249183.1| methyl-accepting chemotaxis sensory transducer [Clostridium
thermocellum JW20]
gi|281409565|gb|EFB39823.1| methyl-accepting chemotaxis sensory transducer [Clostridium
thermocellum JW20]
Length = 602
Score = 37.2 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 33/431 (7%), Positives = 105/431 (24%), Gaps = 31/431 (7%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+G F++ + + + +VD L
Sbjct: 13 RIIIGFFIIVAIACIIGVV----GIQNLKNVQDSYALDYESTVDALE------------- 55
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + L + +I
Sbjct: 56 YVERIS---SHFQQIRVNV---FGFALSYDSDEKREYYTERIAEHINTVDESINGYREIL 109
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ ++ I ++ K+ + + E +
Sbjct: 110 SKYDASEVETEMKLLDNIQAALNEFGVLRNKMMNDLQTGLISREEFVSSFSKGGEAHNLA 169
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S V ID + + K + L+ + + L I I
Sbjct: 170 SNVDNAIQELIDYNIDYAANQISKN--KKQADNSIGLMVMVIAVGAVFALVLGLIISNGI 227
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
V ++ ++ D+ + E G+ +D + S K + +
Sbjct: 228 SKPITKVVAAAGKLAEGDMDITFDINSKDETGKLVDAFRNLVESTKKQAFIVEKIADGDL 287
Query: 307 STSNM--RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN--NISAL 362
+ +++++ I + I I + ++ +++ ++ ++
Sbjct: 288 TVDVPIRSQKDLLGQKLSEMVHNINNLIMNIASAAEQVSAGARQISDSSMALSQGATEQA 347
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRY--IPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
L + + ++ N+ + + ++ + ++ E+ N
Sbjct: 348 SSIEELSASIEEVASKTKINADNANQANDLAEKAKTFALTGNDHMQEMLKAMDEINESSN 407
Query: 421 HFDDCLNNFER 431
+ + + +
Sbjct: 408 NINKIIKVIDD 418
>gi|148229072|ref|NP_001085070.1| myosin, heavy chain 6, cardiac muscle, alpha [Xenopus laevis]
gi|59544117|gb|AAW88310.1| cardiac myosin heavy chain-alpha [Xenopus laevis]
Length = 1934
Score = 37.2 bits (83), Expect = 5.6, Method: Composition-based stats.
Identities = 33/296 (11%), Positives = 94/296 (31%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E+ +++ + S+ + ++ E +
Sbjct: 1303 QTYSQQLEDLKRQLEEESKAKNALAHGLQSARHDCDLLREQYEEEQEAKAELQRVLSKAN 1362
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ+ + +E + ++ K+ ++ N +
Sbjct: 1363 AEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQEAEEAVEAVNAKCSSLEKTKHRLQNEI 1422
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + +D +F K+ S+ F E+ + S+++ S S E+
Sbjct: 1423 EDLMVDLERSNAAAAALDKKQRNFD-KILSEWKQKFEESQTELESSLKESRSLSTELFKL 1481
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + ++ ++L ++ E + ++
Sbjct: 1482 KNAYEESLEHLETFKRENKNLQEEISDLTEQL------GEGGKSIHELEKIRKQLEQEKM 1535
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
++ + +L++ L + L ++ + D+ + +RN Q +V
Sbjct: 1536 ELQTALEEAEASLEHEEGKILRAQLEFNQLKSEIDRKIAEKDEEMEQVKRNNQRLV 1591
>gi|188501448|gb|ACD54581.1| fibrocystin-like protein [Adineta vaga]
Length = 4502
Score = 37.2 bits (83), Expect = 5.7, Method: Composition-based stats.
Identities = 26/285 (9%), Positives = 64/285 (22%)
Query: 56 SSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELS 115
V+ + + R L L+ + + + + P T ++ + I
Sbjct: 3983 DPVKIRRVKIVRESRLSLNGDEFSRVIIEIRDDPRTKATSTSDVSAEVLSNIASAIINSY 4042
Query: 116 TLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKP 175
+ KKT + + NY +N ++ +
Sbjct: 4043 QSGELKKTWADLNFTNGTSPFSLSVQEPFNYSTANLSIINRTELQVVPDQCRQQSPCTFQ 4102
Query: 176 LTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAID 235
+ E + ++ T P+ N + I
Sbjct: 4103 PVLVAYDSEDNIIQKLGSNDRPWQVKATIVNQPNVILPGAIANYTDGQTQYSLFGLPDIG 4162
Query: 236 LQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK 295
+ +V + + I + Q ID + +
Sbjct: 4163 VFEVQFTFIQPDGVNRTNLTVRSDPITVTNASLAGQQINNTYVIDIDQTFDISIILIDNI 4222
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ D + + +I ++ I+
Sbjct: 4223 TRRQIGKTQWDGWKWTANVTLYTLPKFHREGTLIKPSSSRSIISE 4267
>gi|299132316|ref|ZP_07025511.1| methyl-accepting chemotaxis sensory transducer [Afipia sp. 1NLS2]
gi|298592453|gb|EFI52653.1| methyl-accepting chemotaxis sensory transducer [Afipia sp. 1NLS2]
Length = 705
Score = 37.2 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 31/397 (7%), Positives = 109/397 (27%), Gaps = 11/397 (2%)
Query: 41 VIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTAT 100
+ V GL S V G + + L +
Sbjct: 298 LATEFAKEVAGLGQRSEVAAA----GAVQASQAEIGRGRVVLITIALASLLAALLIGWFY 353
Query: 101 IRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISD 160
+ + + ++ + + + + + + + AE+ +
Sbjct: 354 VGRGVVRRLVGLQTNMKAIAAGDLAVDVATKGSDEIAAMGEALQVFKDNMAESNRLRAER 413
Query: 161 SSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTI 220
+ + + + ++ S ++ + + ++ + +
Sbjct: 414 IEGEKRASAQRRSEMSQLADEFHAAVGEIVQTVSSASTELEASARTLTSTAAETQQLSAM 473
Query: 221 TDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQK 280
+ + ++ +I + +S+ + VH T E+ +
Sbjct: 474 VETASGDASRNVDSVAAATEEMTASIAEINRQVQESNRIASDAVHQAEMTDGRINELSKA 533
Query: 281 IDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITS 340
+ + TS + + + + A + +
Sbjct: 534 ATRIGDVIN-----LITSIAEQTNLLALNATIEAARAGESGKGFAVVAQEVKSLATQTSK 588
Query: 341 NLNDSSQKFAEL-MSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN 399
N+ S + A + ++ ++ A+K+ ++ D+ + I I ++Q
Sbjct: 589 ATNEISSQIAGMQVATQESVGAIKQISATIGRISEIASVIADSVGQQGSAIQEIVRSVQG 648
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
++S +++ + ++ + N + + Q +
Sbjct: 649 AAKST-SEVAGNISEVNKGANETSSASSQVLSSAQSL 684
>gi|125974009|ref|YP_001037919.1| methyl-accepting chemotaxis sensory transducer [Clostridium
thermocellum ATCC 27405]
gi|125714234|gb|ABN52726.1| methyl-accepting chemotaxis sensory transducer [Clostridium
thermocellum ATCC 27405]
Length = 602
Score = 37.2 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 32/431 (7%), Positives = 105/431 (24%), Gaps = 31/431 (7%)
Query: 7 YTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG 66
+G F++ + + + +VD L
Sbjct: 13 RIIIGFFIIVAIACIIGVV----GIQNLKNVQDSYALDYESTVDALE------------- 55
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + + L + +
Sbjct: 56 YVERIS---SHFQQIRVNV---FGFALSYDSDEKREYYTERIAEHKNTIDESINGYREIL 109
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ ++ I ++ K+ + + E +
Sbjct: 110 SKYDASEVETDMKLLDNIQAALNEFGVLRNKMMNDLQTGLISREEFVSSFSKGGEAHNLA 169
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
S V + ID + + K + L+ + + L I I
Sbjct: 170 SNVDNAILELIDYNIDYAANQISKN--KKQADNSIGLMVMVIAVGAVFALVLGLIISNGI 227
Query: 247 QVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIAD 306
V ++ ++ D+ + E G+ +D + S K + +
Sbjct: 228 SKPITKVVAAAGKLAEGDMDITFDINSKDETGKLVDAFRNLVESTKKQAFIVEKIADGDL 287
Query: 307 STSNM--RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN--NISAL 362
+ +++++ I + I I + ++ +++ ++ ++
Sbjct: 288 TVDVPIRSQKDLLGQKLSEMVHNINNLIMNIASAAEQVSAGARQISDSSMALSQGATEQA 347
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRY--IPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
L + + ++ N+ + + ++ + ++ E+ N
Sbjct: 348 SSIEELSASIEEVASKTKINADNANQANDLAEKAKTFALTGNDHMQEMLKAMDEINESSN 407
Query: 421 HFDDCLNNFER 431
+ + + +
Sbjct: 408 NINKIIKVIDD 418
>gi|301762084|ref|XP_002916453.1| PREDICTED: centrosome-associated protein CEP250-like [Ailuropoda
melanoleuca]
gi|281346056|gb|EFB21640.1| hypothetical protein PANDA_004532 [Ailuropoda melanoleuca]
Length = 2442
Score = 37.2 bits (83), Expect = 5.8, Method: Composition-based stats.
Identities = 21/235 (8%), Positives = 71/235 (30%), Gaps = 12/235 (5%)
Query: 225 TSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL 284
+ + + + K+ + + ++ + Q + I
Sbjct: 846 QQQKSAHEEEVNRLQEKWEKERSWHQQELDKALESLKREKTELETRLREQQAEAEAIRTQ 905
Query: 285 LSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLND 344
+ ++ +S LE + S + + + +E+ D Q++ ++ +
Sbjct: 906 REEERAEAESALCQMQLETEKERVSLLETLLQTQKELADASQQLERLRQDMKAQKLKEQE 965
Query: 345 SSQKFAELMSKI--NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+++ + + A ++N + + + + + L +
Sbjct: 966 TTEVLQTQLREARREQEQAAQQNGDDLAALREECRALLQAKTDLQEQVEDLKSQLVSRDD 1025
Query: 403 S---GLNDIQNLVRKLQETVNHFDDCLNN-------FERNPQDIVWGREKGSVKI 447
S +++ +R+ QE ++ Q ++ +E SV+
Sbjct: 1026 SRRLVEQEVEEKLREAQEYSRTLEELEREKASLTQSLMEKEQRLLVLQEADSVRQ 1080
>gi|296273125|ref|YP_003655756.1| methyl-accepting chemotaxis sensory transducer [Arcobacter
nitrofigilis DSM 7299]
gi|296097299|gb|ADG93249.1| methyl-accepting chemotaxis sensory transducer [Arcobacter
nitrofigilis DSM 7299]
Length = 885
Score = 37.2 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 54/438 (12%), Positives = 131/438 (29%), Gaps = 31/438 (7%)
Query: 8 TSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGR 67
T++G F++ + F IY S+ + V ++ + +
Sbjct: 328 TAIGCFILILSLLLAFIIYKKIDSDMKLLKNNLLD--FFDFVA--KKKDDIQISNV---- 379
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ +L I + + I +
Sbjct: 380 -------EGKDEFALLINTINEEVHKTKEIASKDNEVLKEIDDVISRVENGFFTYNVKSQ 432
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
A + + + S IN + I + + + E+ NI T+S
Sbjct: 433 AGSDSVNTLKISVNSMINITKEKLDT-LGLILKAYGEYKYDFKLNEEQKRGIAGNIGTLS 491
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ L + I M T ++ T S +A L++ L+ I
Sbjct: 492 SSLLALGNDISSFMATFSNVIDKLNNNTHILASTSATISQSSNNQAASLEETAASLDEIT 551
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADS 307
+ ++ Q+ + +T + + + + + ++K+ S + +
Sbjct: 552 SNIQMNAENIIQMSQLSDKLNDTASKGNTLAKNTSNAMEEINTKINQINESITIIDQIAF 611
Query: 308 TSNMRSSISAIREIT--DQRQKIISTINTIENITSNLNDSSQKFAELMSKINN------- 358
+N+ S +A+ T + + + N+ S +++ + L+ +
Sbjct: 612 QTNILSLNAAVEAATAGEAGKGFAVVAGEVRNLASRSAEAAHEIKSLVEEATQKANEGKS 671
Query: 359 -----ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVR 413
I + ++ K+ + + TSE+ I I + N + + + V
Sbjct: 672 VSNTMIEGYNDLDNKIKETKHIIDEVASTSEEQKSRILQINAAISNLDKMTQENASS-VS 730
Query: 414 KLQETVNHFDDCLNNFER 431
L + + +D E
Sbjct: 731 NLSKISHEVEDLSLQIED 748
>gi|149038249|gb|EDL92609.1| MON1 homolog b (yeast) (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 583
Score = 37.2 bits (83), Expect = 5.9, Method: Composition-based stats.
Identities = 17/157 (10%), Positives = 51/157 (32%), Gaps = 9/157 (5%)
Query: 289 SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQK 348
+ + + + I + + +T+ + + S + +
Sbjct: 129 GDPNDGDPSDEDWRSQRKHVFVLSEAGKPIYSRYGSVEALSATMGVMTALVSFVQSAGDA 188
Query: 349 FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQ 402
+ ++ + + L++ L R + ++ I + L F+
Sbjct: 189 IRAIYAEDHKLVFLQQGPLLLVAVSRTPQSAAQLRGELLAVHAQIVSTLTRASVARIFAH 248
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWG 439
D++ L+ + T D L++ E++P ++ G
Sbjct: 249 KQNYDLRRLLAGSERT---LDRLLDSVEQDPGALLLG 282
>gi|8272640|gb|AAF74293.1|AF265355_1 myosin heavy chain isoform [Rana catesbeiana]
Length = 771
Score = 37.2 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 29/287 (10%), Positives = 86/287 (29%), Gaps = 13/287 (4%)
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
Q+I + + T A V + + S+ + + +
Sbjct: 145 FTQQIEDLRRQLEEETKAKNALAHAVQSARHDCDLLREQFDEEQEAKSELQRSLSKCNAE 204
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + +Q+ ++ E + + ++ + V +T + +++
Sbjct: 205 VALWRNKYETDAIQRTEELEEAKKKLAIRLQEAEEAVEAANAKCASLEKTKHRLQSELED 264
Query: 284 LLSDF-SSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI----ENI 338
++ D S + N ++ + + + QK +++T +N
Sbjct: 265 MMIDLERSNATAAAMDKKQRNFDKILADWKQKYEEAQAELEASQKEARSLSTELFKLKNA 324
Query: 339 TSNLNDSSQKFAELMSKI-----NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+ D + + + + E N + ++ +I +
Sbjct: 325 YEEVLDILETVKRENKNLQEEISDLTDQISEGNKSLHEVEKVKKQVEQEKSEIQLALEEA 384
Query: 394 GNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
L++ L ++ + + + + D+ N RN Q I+
Sbjct: 385 EGALEHEESKTLRFQLELSQIRSEFERKLAEKDEETENIRRNQQRII 431
>gi|300853595|ref|YP_003778579.1| putative methyl-accepting chemotaxis protein [Clostridium
ljungdahlii DSM 13528]
gi|300433710|gb|ADK13477.1| predicted methyl-accepting chemotaxis protein [Clostridium
ljungdahlii DSM 13528]
Length = 570
Score = 37.2 bits (83), Expect = 6.0, Method: Composition-based stats.
Identities = 54/444 (12%), Positives = 145/444 (32%), Gaps = 28/444 (6%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLST-DSSVRFNGIPVGR 67
+G F+V++ I ++ N G + + +V L D+ + R
Sbjct: 14 VIGFFMVTLFVVIVGIIGLVNMHNINKGANEMYSVDL-ENVKNLDKFDADIMHQ-----R 67
Query: 68 IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + L + + I+ P + + + +T E + + K + +
Sbjct: 68 LETIDLVESRDKD-KVQDTIKNIAPYQNKDNSILNNYKNSDLTLQEKNLVSKLESQLIDW 126
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
N+ + + N E + + +S Q ++K +N+ +
Sbjct: 127 RNICNKIIELMGQGKYDDAMNVNKEAATYRNKLTSTIEQLTQTEVQKANDKNNSNMSIYN 186
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
L + + + S + + L + + + +
Sbjct: 187 ESLYMIMIITLIGIVVAFFLGNRIASSISKEANSILKFTDAISQGDLSKSIQALSKDEMG 246
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK-----ETSAFLE 302
+ K++ + N V ++ ++T+ +++ + SS M S + + E
Sbjct: 247 TIAGELGKANKNIRNLVLEITQSTENISASSEELSATTEEISSMMTSVNESTSQIAGGSE 306
Query: 303 NIADSTSNMRSSISAIREITDQ-RQKIISTINTIENITSNLNDSSQKFAELMS------- 354
+++ T + +S + + T + QK + I D +K A+ +
Sbjct: 307 DLSRITEEISASCEKMEQNTHKLTQKANEATKSSTEIKKRAVDIKEKAAQSIEEGNDIYN 366
Query: 355 -KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSG------LND 407
+ ++I E + + + + D +E+ N + + + G ++
Sbjct: 367 KRRDDIIKAIEKGKVVSEVKIMAASIGDIAEQTNLLALNAAIEAASAGEHGKGFAVVADE 426
Query: 408 IQNLVRKLQETVNHFDDCLNNFER 431
++ L + E V + + + E
Sbjct: 427 VRKLAEESSEAVENINRMVLAVED 450
>gi|327191860|gb|EGE58855.1| putative methyl accepting chemotaxis protein [Rhizobium etli
CNPAF512]
Length = 601
Score = 37.2 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 28/293 (9%), Positives = 82/293 (27%), Gaps = 3/293 (1%)
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
S E + ++ + ++ ++S I+ +
Sbjct: 308 AFQLSDRFAPEFEPLRHDFNASVEQLGGTLLSISKSVSIINSGTREINNGSSELSGRTER 367
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
T T+ + + +I E + ++N +S+ V + +E
Sbjct: 368 QAATLEETAAALDAVTAKVSQAFKIAEEARNVADNANRSAMASGKVVAQTVDAMGQIEES 427
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
++I++++ A + + + A+ + + +
Sbjct: 428 SKQINNIIGVIDQIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVR-ELAQRSAQAARE 486
Query: 338 ITSNLNDSSQKFAELMSKINNI-SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN 396
I + +S K A + +N+ +AL + D + M ++ + + +
Sbjct: 487 IKELIGRASAKVASGVELVNHTGAALSDIGRFIVDINQRMEALAASARDQATSLSEVNSA 546
Query: 397 LQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ Q + +V + G + + Y+
Sbjct: 547 MGQLDQVTQQN-AAMVEETTAASVTLASEAERLRELVTQFELGGAESGTRSYR 598
>gi|83026774|gb|ABB96414.1| masticatory myosin heavy chain 2M [Canis lupus familiaris]
Length = 1880
Score = 37.2 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 22/300 (7%), Positives = 79/300 (26%), Gaps = 19/300 (6%)
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ +I+ + + + I + + +
Sbjct: 1056 VKKRDMEINSVNSKYEDEQSLNSTLQRKLKEHQARIEELEEELEAERSMRAKVEKQRSDL 1115
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
S + + + ++ ++L+ + ++S ++
Sbjct: 1116 SRDLEDLSDRLEEAGGATSAQIEQNRKREAELLKLRRELEEAALQSEAAASTLRKKHTDS 1175
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
E + + + S I D ++M + + +K+
Sbjct: 1176 MAELTEHVENLQRVKSKLEKDK-----QVMKAEIDDLNASMETVQKSKMNAEAHIRKLED 1230
Query: 331 TINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+++ + L + + + +++ + +L + + + ++ R +
Sbjct: 1231 SLSEANAKVAELERNQAEINAVRTRLQAMVSLANTKHDLDLVKEQLEEEQGGKSELQRLV 1290
Query: 391 PSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLN--------------NFERNPQDI 436
+ + + D +L+ET L + E+N Q +
Sbjct: 1291 SKLNTEVTTWRTKYETDAIQRTEELEETKRKLAARLQEAEETAEAAQARAASLEKNKQRL 1350
>gi|305662299|gb|ADM62265.1| DNA repair protein [Bisgaardia genomosp. 1]
Length = 450
Score = 37.2 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 19/180 (10%), Positives = 55/180 (30%), Gaps = 3/180 (1%)
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
+ + Q +D+ + +E+ +++ + +
Sbjct: 114 QFLIQINSQHASQQLLKNDHQLQLLDNFCAHDQLIKNMQESYRTWKDLQLQVKTFQQKCA 173
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
Q + ++ + + ++ L S + + L + +
Sbjct: 174 ENEAKKQLLQYQVEELDQFSLKENEYLELEEEHTRLSSSEELTALSQSALQLLSENESV- 232
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
K N+YI + QN+S + ++ + ++QE + N E++P +
Sbjct: 233 -NIDTLLYKTNQYINELCQLDQNYSGA-QKMLEEALIQIQEATSEIQHLSANIEQDPTRL 290
>gi|268316126|ref|YP_003289845.1| hypothetical protein Rmar_0557 [Rhodothermus marinus DSM 4252]
gi|262333660|gb|ACY47457.1| hypothetical protein Rmar_0557 [Rhodothermus marinus DSM 4252]
Length = 356
Score = 37.2 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 17/196 (8%), Positives = 56/196 (28%), Gaps = 17/196 (8%)
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
I HD+ + E ++ L+ + +E + ++
Sbjct: 1 MPFEIQDFHDLVRLLEAHPEWRAELRRLVLSEELLRLPELVQQLIEAHRRAEERLQHVEE 60
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN-----SLFKD 371
+ + +++ E ++ + + ++++ E +
Sbjct: 61 RLDRLEATVAQLVEAQRKAEERLQHVEERLDRLEATVAQLIEAQRKAEERLDRLEATVAQ 120
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL-----------QETVN 420
A + +++ + + Q ++ L+ ++ V +L Q T
Sbjct: 121 LVEAHRRAEERLDRLEATVAQLIEA-QRKAEERLDRLEATVAQLIEAQRKAEERLQRTEA 179
Query: 421 HFDDCLNNFERNPQDI 436
+ ER + +
Sbjct: 180 RLERVEKRLERVEKRL 195
>gi|85859032|ref|YP_461234.1| methyl-accepting chemotaxis protein [Syntrophus aciditrophicus SB]
gi|85722123|gb|ABC77066.1| methyl-accepting chemotaxis protein [Syntrophus aciditrophicus SB]
Length = 648
Score = 37.2 bits (83), Expect = 6.2, Method: Composition-based stats.
Identities = 34/379 (8%), Positives = 99/379 (26%), Gaps = 16/379 (4%)
Query: 55 DSSV-----RFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGI 109
+ V +F G+ VG + + + K + I I
Sbjct: 173 GAPVYSSSGQFLGV-VGCVANIDFISDKIGA--VKIGETGYAYVLNKEGVVIAHPKADFI 229
Query: 110 TYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKII 169
L+ + Q+ ++ + E T+ + + + +
Sbjct: 230 LEKNLAKEEGMVEFAQQMLARKSGTGKYALAGVEKIGGYAPVELTAWSVGVVQDYEELMA 289
Query: 170 ENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDK 229
+ + ++ + + + + ++ + + S
Sbjct: 290 PAVSIRNFMMLITAAFLALAVVLVLYFARSISRPIKNAVNTLNDSADQIASASMQVSSAS 349
Query: 230 MIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFS 289
A + LE S + Q + +V Q+ + + +
Sbjct: 350 QSLAEGASEQASALEETSSSLEEMSSMTKQNAGNASQADSLMRQANQVVQRANSSMIHLT 409
Query: 290 SKMKSKETSAFLEN--IADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
M+ ++ + I + + + + + + +
Sbjct: 410 DSMQQISKASDETSKIIKTIDEVAFQTNLLALNAAVEAARAGEAGAGFAVVAEEVRNLAM 469
Query: 348 KFAELMSKINNIS-----ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQ 402
+ A+ ++ +KE + L A ++SEK+ + I N
Sbjct: 470 RAADAARNTASLIEGTVKKVKEGSDLVVKTNEAFMEVAESSEKVGGLVSEIAAA-SNEQA 528
Query: 403 SGLNDIQNLVRKLQETVNH 421
G++ + V ++ +
Sbjct: 529 QGIDQVNKAVAEMDKVTQQ 547
>gi|258516497|ref|YP_003192719.1| methyl-accepting chemotaxis sensory transducer [Desulfotomaculum
acetoxidans DSM 771]
gi|257780202|gb|ACV64096.1| methyl-accepting chemotaxis sensory transducer [Desulfotomaculum
acetoxidans DSM 771]
Length = 519
Score = 36.8 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 51/471 (10%), Positives = 122/471 (25%), Gaps = 45/471 (9%)
Query: 1 MESKNYYTSVGLFVVSILFFSFFSIYWLSRSNQYDGP-------------MAEVIIRIPG 47
M+ + VG + +L I + D ++ +
Sbjct: 1 MKKISTKIWVGFTSLLVLMTIMVGITYYQLGQLVDQSEALSQHRIPMTNTSYQLALNFAR 60
Query: 48 SVDG----LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRT 103
G L+T + +F I ++ + A + A +++
Sbjct: 61 QAAGIRGYLATGNE-KF-------IDEYSRAKKESDEETAYIEKNLASDENKQLFAQVKS 112
Query: 104 QGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSR 163
Y +++ A+ + K +
Sbjct: 113 AINDFEQYPMAIISMYKEQGQKAAASYMTGITAPANERAINEINNFIVIQKQKIQQEGDN 172
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
+ I+ L + + T+ I + + I
Sbjct: 173 VQNRAIKTRTFSLVILVFGVILGLTLAFYITRPITIALKKISDISSKYAGGDFREAIEIK 232
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
T + + I + IQ N+ + ++ V V ++T+ E +
Sbjct: 233 STDELGQLAVSLTKMQKSIQDIIQKLINSSKQINESVAQMVAQAQQTSAGSSETAATMSE 292
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
+ S+ ++ I + +Q ++I ++ + +LN
Sbjct: 293 IAGTVD--NMSQNAQDVSHRAGIASQYADRGHQGIEMVNNQMKEISTSTMQVGTSIKDLN 350
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRA------------MHTFRDTSEKINRYIP 391
+ K + + I NI+ +L + A R +E+ +
Sbjct: 351 TAISKIGQFVEVITNIADQTNLLALNAAIEAARAGDAGRGFAVVAEEVRKLAEQSAQSTK 410
Query: 392 SIGNNLQNFSQSGLNDIQNL------VRKLQETVNHFDDCLNNFERNPQDI 436
I + + +Q + V + E N N + Q++
Sbjct: 411 EIVQLMNEIEGYSIQAVQAIKLGDEKVEQGNEVANEVGQSFNEIIKAVQEL 461
>gi|312879479|ref|ZP_07739279.1| methyl-accepting chemotaxis sensory transducer [Aminomonas
paucivorans DSM 12260]
gi|310782770|gb|EFQ23168.1| methyl-accepting chemotaxis sensory transducer [Aminomonas
paucivorans DSM 12260]
Length = 620
Score = 36.8 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 22/314 (7%), Positives = 83/314 (26%), Gaps = 7/314 (2%)
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ A + PSG + A + + + I + + +
Sbjct: 57 LPHPAEGEERPPQPAQVPSGSSEAKRLALQ-LASAWEDVQGACRYIFRSMQAIGEETGQV 115
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
+A + + +S + + + +
Sbjct: 116 ARAGDDVAALAQELQTHLTRNTENTEASARTLGRVADQGRGIQEEARKDQELVTSTVEAV 175
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN 303
+ S+ ++ + + + + T T + + ++ + L ++ +++
Sbjct: 176 RLVAQSTRGVAEAIEDMKGVSDHIVQITDTIRNLAKQTNLL--ALNASIEAARAGEHGRG 233
Query: 304 IADSTSNMRSSISAIREITDQRQKIISTINTIENIT-SNLNDSSQKFAELMSKINNISAL 362
+ +R+ A ++ K+ ++ + + + D+ + K
Sbjct: 234 FSVVAEEVRTLAEASTRAAEEIGKLAASSRDLAQVAVDRMEDARVRVEATDEKAELTRQS 293
Query: 363 KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
+ + + + + S + + + + +L+ T
Sbjct: 294 LD--RVLGAVEEVLDSLGSASRSAQEQ-AEAAREMTRAVHTVTERVSDQAERLRRTDTKL 350
Query: 423 DDCLNNFERNPQDI 436
+ E Q +
Sbjct: 351 QEQSGITETIHQRL 364
>gi|293391407|ref|ZP_06635741.1| RecN protein [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290951941|gb|EFE02060.1| RecN protein [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 558
Score = 36.8 bits (82), Expect = 6.3, Method: Composition-based stats.
Identities = 21/242 (8%), Positives = 69/242 (28%), Gaps = 13/242 (5%)
Query: 200 MMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQ 259
+ ++ + + + + D + + I +
Sbjct: 68 FQINRNNPAYQFLLEHDLQDQDNPEECILRRMINHDGRSKSFINGIPVAAVQLKEIGQHL 127
Query: 260 VINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIR 319
+ + + + Q +D + + + ++ + +
Sbjct: 128 IQISGQHASQLLLKNEYQLQLVDSFCHHPALLQQMQTDYQRWRDLQQQVKTFQQKCAENE 187
Query: 320 EITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-- 377
+ + N + ++AEL + N +S +E+ L + + +
Sbjct: 188 ARKQ-------LLQYQVSELDEFNLKANEYAELEADHNRLSNSEESTQLSQSVLQLLSEN 240
Query: 378 ---TFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
+ + +++ + L N N + + ++QE N +N E++P
Sbjct: 241 ETVSVDSLLYRATKHLDELCE-LDNRYAEVQNLLNEAMIQVQEATNEIQALSSNIEQDPA 299
Query: 435 DI 436
+
Sbjct: 300 LL 301
>gi|307546929|ref|YP_003899408.1| methyl-accepting chemotaxis protein I [Halomonas elongata DSM 2581]
gi|307218953|emb|CBV44223.1| methyl-accepting chemotaxis protein I [Halomonas elongata DSM 2581]
Length = 581
Score = 36.8 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 20/210 (9%), Positives = 59/210 (28%), Gaps = 3/210 (1%)
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + + ++++Q V +V T ++ ++ S
Sbjct: 322 QNAENAQQASQLAAEASRTAEQGGQVVGEVVSTMHEISRGSHRVAEIIGTIDSIAFQTNI 381
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
A ++ + + A+ + R + + I + S ++ ++
Sbjct: 382 LALNASVEAARAGEHGRGFAV-VAQEVRSLASRSASAASEIRELIEASVKQVDAGTGSVD 440
Query: 358 NISAL-KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
E + M S + + I + + Q + + LV++
Sbjct: 441 RAGRTMTEVVESVQRVSDIMDEIAAASTEQSNGISQVNEAVTQMDQVTQQNAE-LVQQAA 499
Query: 417 ETVNHFDDCLNNFERNPQDIVWGREKGSVK 446
+ Q + G+V+
Sbjct: 500 SAATQLEAESGRLREATQRFRLREDTGTVR 529
>gi|291237830|ref|XP_002738835.1| PREDICTED: ZYRO0B12144p-like [Saccoglossus kowalevskii]
Length = 1387
Score = 36.8 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 36/386 (9%), Positives = 108/386 (27%), Gaps = 12/386 (3%)
Query: 64 PVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKT 123
PVG+++ EY + IR D + + ++ +T TL +
Sbjct: 833 PVGKVI---PQVEYDRMVKERDRIREDYESVKNDYDELESRHRRYLTDHITRTLDNPRSP 889
Query: 124 IFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANI 183
+ + + + S + ++ E I+K
Sbjct: 890 SKTSDSIDGKSVEYEQLKRCNEDLEKRIDLFQSQSSLAENTKKRTEEKIQKLEAEVHELK 949
Query: 184 ETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQIL 243
++T + + ++D + + ++ ++ + + +
Sbjct: 950 VALATKNQERVKSGKLPIVIWTGEEDANDDEIIQAVMKEMDDGEEESWDDDHDESDSDGV 1009
Query: 244 ENIQVSSNNFVKSSDQVINTVHDVRETTQ--------TFQEVGQKIDHLLSDFSSKMKSK 295
++ +F + + + ++ + ++ +M+ K
Sbjct: 1010 DDDNTELVDFKSDPTDSTDITPASQPVAIVSDAKTHASLASEIEQKNLIIEKIQREMQDK 1069
Query: 296 ETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSK 355
T EI +++ I+ + + + K E +K
Sbjct: 1070 LEEKNQIIQRIETEKDNRLSEQTSEIAKLKKQRDELIHERKRLEKLKRELGMKIDEQNAK 1129
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
I + + + ++ + + + + Q +Q ++
Sbjct: 1130 IEKL-QENNPQYDQHELSMRIDELQNELLNVFQSSKTTQEKNEITIQHLHKQLQEKQDEI 1188
Query: 416 QETVNHFDDCLNNFERNPQDIVWGRE 441
Q+ + + + FE Q ++G E
Sbjct: 1189 QQLEDFLTEKEDEFETLKQKKMFGSE 1214
>gi|88603906|ref|YP_504084.1| methyl-accepting chemotaxis sensory transducer [Methanospirillum
hungatei JF-1]
gi|88189368|gb|ABD42365.1| methyl-accepting chemotaxis sensory transducer [Methanospirillum
hungatei JF-1]
Length = 808
Score = 36.8 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 47/429 (10%), Positives = 121/429 (28%), Gaps = 26/429 (6%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDG-LSTDSSVRFNGIPVGRI-- 68
+F+V IL I M E++ DG L + R+
Sbjct: 309 IFIVVILGIIGGFIVATLFGRSISTRMDELVTLARQVRDGKLVAQTD---------RVYS 359
Query: 69 -VGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQI 127
+ + + + + L D ST A G + + +
Sbjct: 360 QDEIGILSQAFSDVVHTFLQFRDEIRTLSTAAASGNLKTRGDS-----RKFQGDYALIID 414
Query: 128 ATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETIS 187
AM + A + ++ L T ++
Sbjct: 415 GVNETVDAMAVPLNEAMILSKRYATGDFTARMNPDLQLKGEFVTFRDALDTIGIDVSKAL 474
Query: 188 TVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQ 247
+ + + + M +++ + S A VN + +
Sbjct: 475 AAVHAQMKELTEEMIEVSKRVDEVNAETNTAHKSIEDVSEGVGQVASIATAVNNLADKSG 534
Query: 248 VSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSD-FSSKMKSKETSAFLENIAD 306
+++ + + + TV V + + L + +++ + +
Sbjct: 535 MATQQILTAMQDLATTVSSVAAKMEHVSVLTNMAAELSEKGKDAAGLAEKGMHGIMESSS 594
Query: 307 STSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENN 366
M IS + ++ IIS+I N+ LN + + + + E
Sbjct: 595 EIEEMNQQISGQMQEINRIVDIISSIAEETNLL-ALNAAIEAARAGEAGLGFAVVAAEVK 653
Query: 367 SLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQN------FSQSGLNDIQNLVRKLQETVN 420
L ++Q++ + + ++ +QN + + + + ++ E+++
Sbjct: 654 ELANESQKSAENIALIISDLQKKSGAMAKAVQNSIIEVKSGNTAVGETLAVFNEIVESIS 713
Query: 421 HFDDCLNNF 429
+ ++
Sbjct: 714 TINSNMSEV 722
>gi|67537650|ref|XP_662599.1| hypothetical protein AN4995.2 [Aspergillus nidulans FGSC A4]
gi|40741883|gb|EAA61073.1| hypothetical protein AN4995.2 [Aspergillus nidulans FGSC A4]
gi|259482132|tpe|CBF76320.1| TPA: putative microbody (peroxisome) proliferation protein peroxin
23-like (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 521
Score = 36.8 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 34/320 (10%), Positives = 80/320 (25%), Gaps = 11/320 (3%)
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
+N + P + + Q ++ P +
Sbjct: 152 KNHPKICGLKPGSELDILYENQRGWFFFGVPLYSSQSLLNTDPAPWVNATGKRSFVDITN 211
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
A + T S D + + +
Sbjct: 212 AQVPDPSWEWAWKTWHVDMSGDVDEQGWQYAFSFLRSSSWHG--THPFWHSFVRRRRWVR 269
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
K+S + E T E I L + + NI ++
Sbjct: 270 LRIKKASTERNRRSRTGLEMAHTLNEDYFTIHSALKQKRGTSSERASRGTSGNIGKLFTD 329
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
+ + IR+I I I E + + + EL I +
Sbjct: 330 TQEYVEEIRDIPTLMYAIRVAIVDREKLNAVRKFVDEGVEELYYLEGKIPEIMTRFVYRT 389
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFE 430
+ + +T + +++ + + D+++ ++ L+ + ++ E
Sbjct: 390 SRWQFLTYLNETMQSLDQQQKELET-----TGQTQPDLESNIQNLRRKQEYLSRAISTAE 444
Query: 431 RNPQDIVWGREKGSVKIYKP 450
R+ + G V+ +P
Sbjct: 445 RH----LIGPTVLRVQELEP 460
>gi|329737358|gb|EGG73612.1| putative type III secretion apparatus needle protein [Staphylococcus
epidermidis VCU028]
Length = 10148
Score = 36.8 bits (82), Expect = 6.4, Method: Composition-based stats.
Identities = 36/359 (10%), Positives = 112/359 (31%), Gaps = 11/359 (3%)
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + P S A + + P I + + ++ +++ +
Sbjct: 3755 LTNDNPQVSQVTAALNKIKAVQPELDKAIA---MLKNKENNNALVQAKQQLQQIVNEVDP 3811
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ M T T + AE+ +K + + I I I+ +
Sbjct: 3812 TQGMTTDTANNYKSKKREAEDEIQKAQQIINNGDATEQQITNETNRVNQAINAINKAKND 3871
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ ++ + + D+ + + I+ ++ + ++ S+ +
Sbjct: 3872 LRADKSQLENAYNQLIQNVDTNGKKPASIQQYQAARQAIETQYNNAKSEAHQILENSNPS 3931
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + + + K ++ + + + + ++
Sbjct: 3932 VNEVAQALQKVEAVQLKVNDAIHILQNKENNSALVTAKNQLQQSVNDQPLTTGMTQDSIN 3991
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + E + + IN + ++D K + ++ +N+ A ++ + +
Sbjct: 3992 NYEAKRNEAQSAIRNAEAVINNGDATAKQISDEKSKVEQALAHLND--AKQQLTADTTEL 4049
Query: 373 QRAMHTFRDTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
Q A+ + N+ SI +L+ S ++ +++K TV ++
Sbjct: 4050 QTAVQQLNRRGDTNNKKPRSINAYNKAIQSLETQITSAKDNANAVIQKPIRTVQEVNNA 4108
>gi|282876125|ref|ZP_06284992.1| putative type III secretion apparatus needle protein [Staphylococcus
epidermidis SK135]
gi|281295150|gb|EFA87677.1| putative type III secretion apparatus needle protein [Staphylococcus
epidermidis SK135]
Length = 10148
Score = 36.8 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 36/359 (10%), Positives = 112/359 (31%), Gaps = 11/359 (3%)
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + P S A + + P I + + ++ +++ +
Sbjct: 3755 LTNDNPQVSQVTAALNKIKAVQPELDKAIA---MLKNKENNNALVQAKQQLQQIVNEVDP 3811
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ M T T + AE+ +K + + I I I+ +
Sbjct: 3812 TQGMTTDTANNYKSKKREAEDEIQKAQQIINNGDATEQQITNETNRVNQAINAINKAKND 3871
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ ++ + + D+ + + I+ ++ + ++ S+ +
Sbjct: 3872 LRADKSQLENAYNQLIQNVDTNGKKPASIQQYQAARQAIETQYNNAKSEAHQILENSNPS 3931
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + + + K ++ + + + + ++
Sbjct: 3932 VNEVAQALQKVEAVQLKVNDAIHILQNKENNSALVTAKNQLQQSVNDQPLTTGMTQDSIN 3991
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + E + + IN + ++D K + ++ +N+ A ++ + +
Sbjct: 3992 NYEAKRNEAQSAIRNAEAVINNGDATAKQISDEKSKVEQALAHLND--AKQQLTADTTEL 4049
Query: 373 QRAMHTFRDTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
Q A+ + N+ SI +L+ S ++ +++K TV ++
Sbjct: 4050 QTAVQQLNRRGDTNNKKPRSINAYNKAIQSLETQITSAKDNANAVIQKPIRTVQEVNNA 4108
>gi|269964202|ref|ZP_06178493.1| Methyl-accepting chemotaxis protein [Vibrio harveyi 1DA3]
gi|269831051|gb|EEZ85219.1| Methyl-accepting chemotaxis protein [Vibrio harveyi 1DA3]
Length = 472
Score = 36.8 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 23/236 (9%), Positives = 76/236 (32%), Gaps = 8/236 (3%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + ++ + + K +D+ V +
Sbjct: 138 YYIMTFIGGAMFTMNKALNTLADGDLTARMNFFRVRDEFSEIAITIDKVADREQKMVQSI 197
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+E+ Q++ ++ + + SS++ + + + + + D +
Sbjct: 198 QESVALMQQISSDLNLSIHN-SSEISNTQQEHLNSLASATEQMASTIREVATLAHDSSTQ 256
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNIS-ALKENNSLFKDAQRAMHTFRDTSEKI 386
+ ++ + ++ + L ++I + S A++E ++ + T SE+
Sbjct: 257 TDDARSVAQSGQVKVENTLHSISNLSTEIQSASQAVEELDANAAQIDEVVTTINGISEQT 316
Query: 387 NRYIPSIGNNLQNFSQSG------LNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
N + + G ++++ L + Q+ + +RN Q +
Sbjct: 317 NLLALNAAIEAARAGEQGRGFAVVADEVRALAGRTQQATVEIQAMIEALQRNSQSL 372
>gi|260772302|ref|ZP_05881218.1| methyl-accepting chemotaxis protein [Vibrio metschnikovii CIP
69.14]
gi|260611441|gb|EEX36644.1| methyl-accepting chemotaxis protein [Vibrio metschnikovii CIP
69.14]
Length = 623
Score = 36.8 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 38/393 (9%), Positives = 113/393 (28%), Gaps = 30/393 (7%)
Query: 52 LSTDSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITY 111
+S + VR G +G +F D E + I + G
Sbjct: 153 ISIGTPVRHAGRFIG---AMFYDLELTQLAEMVNRIN---LFDAGYLFIVTADGSTIAHP 206
Query: 112 IELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIEN 171
+K + + + + + S + S+ + + + +
Sbjct: 207 ETRYNGQKLTAYLPDVQLKEGLKQVDINGQS-HLVYFSHVPSENWYVGAVIDESLAFVAL 265
Query: 172 IEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSS--------DSKNTFNTITDL 223
+ ++ I + + + I+ +M V + D +T TD
Sbjct: 266 TKLRNSSIIYTLIGVIVSIIGLTLLINVLMRPLSVLNQAIKDVASGQGDLTKRLDTNTDQ 325
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + + ++ + ++ ++ I +V ++ + +++
Sbjct: 326 EFAELAHGFNTFTETLQTQIKQSKAIGEEIMRGAELTIMSVEGSSSAMRSQLQELEQLAT 385
Query: 284 LLSDFS--SKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
+ + S + + ++ + T K+ + I
Sbjct: 386 AMHEMSVTATEVANNAQGAASAAKEADEATIEGSQVVSVTTQSIDKLSAHIEMAVKEVQG 445
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRA------------MHTFRDTSEKINRY 389
L ++ ++ IN+I+ +L + A R +++ +
Sbjct: 446 LESATANIETILKVINDIADQTNLLALNAAIEAARAGESGRGFAVVADEVRTLAQRTQQS 505
Query: 390 IPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHF 422
I ++ Q G + + +++ ++T
Sbjct: 506 TTEIRGMIEQL-QIGSSSVSKAMKESKDTAVDV 537
>gi|57867844|ref|YP_188588.1| cell wall associated fibronectin-binding protein [Staphylococcus
epidermidis RP62A]
gi|57638502|gb|AAW55290.1| cell wall associated fibronectin-binding protein [Staphylococcus
epidermidis RP62A]
Length = 10203
Score = 36.8 bits (82), Expect = 6.5, Method: Composition-based stats.
Identities = 36/359 (10%), Positives = 112/359 (31%), Gaps = 11/359 (3%)
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + P S A + + P I + + ++ +++ +
Sbjct: 3809 LTNDNPQVSQVTAALNKIKAVQPELDKAIA---MLKNKENNNALVQAKQQLQQIVNEVDP 3865
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ M T T + AE+ +K + + I I I+ +
Sbjct: 3866 TQGMTTDTANNYKSKKREAEDEIQKAQQIINNGDATEQQITNETNRVNQAINAINKAKND 3925
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ ++ + + D+ + + I+ ++ + ++ S+ +
Sbjct: 3926 LRADKSQLENAYNQLIQNVDTNGKKPASIQQYQAARQAIETQYNNAKSEAHQILENSNPS 3985
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + + + K ++ + + + + ++
Sbjct: 3986 VNEVAQALQKVEAVQLKVNDAIHILQNKENNSALVTAKNQLQQSVNDQPLTTGMTQDSIN 4045
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + E + + IN + ++D K + ++ +N+ A ++ + +
Sbjct: 4046 NYEAKRNEAQSAIRNAEAVINNGDATAKQISDEKSKVEQALAHLND--AKQQLTADTTEL 4103
Query: 373 QRAMHTFRDTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
Q A+ + N+ SI +L+ S ++ +++K TV ++
Sbjct: 4104 QTAVQQLNRRGDTNNKKPRSINAYNKAIQSLETQITSAKDNANAVIQKPIRTVQEVNNA 4162
>gi|326430849|gb|EGD76419.1| hypothetical protein PTSG_07538 [Salpingoeca sp. ATCC 50818]
Length = 1258
Score = 36.8 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 28/314 (8%), Positives = 89/314 (28%), Gaps = 16/314 (5%)
Query: 125 FQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIE 184
+ + A I +P + I + S+ + + +E + L + A
Sbjct: 408 MVSDVDDDDNAWIDPSPLLADSDIHRRLSRSQAQVGQLQLRIRELEEMNARLKASTAVSA 467
Query: 185 TISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILE 244
A +H + ++ T + +L+ + +E
Sbjct: 468 DADGEQAAADTHAREAGGDDDHDDGVKIPFVRSSSSTAAAAAAATSRLEAELEVKKEAIE 527
Query: 245 NIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENI 304
++ + + + ++ + +R+ + ++ + ++ A
Sbjct: 528 KLEETVRDLERRLERETDETSALRQHADSITADRDRL------LRELEQMADSQAAASEE 581
Query: 305 ADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKE 364
+ + + + E + A+
Sbjct: 582 HSTREIVLQHQVDELNQQLRTAETKIATLEHERGVGAAEAEQLRSDMAAQTREGDEAIHT 641
Query: 365 NNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL---QNFSQSGLNDIQNLV-------RK 414
A+ A+ + R+ +++ I + Q + +G++DI+ + +
Sbjct: 642 LKEALASARVALSSVREEKDELLARIDDMREEADTRQRDATAGVDDIRRKLAAAEEERDE 701
Query: 415 LQETVNHFDDCLNN 428
L+ TV+ ++
Sbjct: 702 LRRTVSSLQAQADD 715
>gi|262276826|ref|ZP_06054619.1| chromosome segregation protein SMC [alpha proteobacterium HIMB114]
gi|262223929|gb|EEY74388.1| chromosome segregation protein SMC [alpha proteobacterium HIMB114]
Length = 809
Score = 36.8 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 38/361 (10%), Positives = 96/361 (26%), Gaps = 14/361 (3%)
Query: 70 GLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIAT 129
+ DQ + K I + + + I ++ E++ I +
Sbjct: 295 KIEFDQINKDEERVKIEIE---KIKKD--IKLTYSDINREKEIIANSTNNEERLIKERND 349
Query: 130 ERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTV 189
N+ N K ++ + + +I K +
Sbjct: 350 IAEVEKNYYEIEKAATDDYKNSLNQLNKAKEALKSFFNKLIDIVKNKEEINEDTIQQEFN 409
Query: 190 LANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVS 249
+ + ++ + + L ++ +
Sbjct: 410 KEFENIENQQEKYASRFGKYDLVKQEAIKRKERLNNIDKEIQNW--RDLKENSTNKLSQL 467
Query: 250 SNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLEN-IADST 308
+ + R+ + Q I ++ D + N + +
Sbjct: 468 KEKVNSLENGLEKEEDKPRQIAEKRGSYQQNIKNIEEDIEGIKSNLIIKENKINELNLAL 527
Query: 309 SNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSL 368
+ S E + Q II + + + ++ I + S ++ N L
Sbjct: 528 KKINESTLQKTEFRVRSQTIIEGLRSKLKELQQKSLIDFNID--LNGIADFSKIENLNQL 585
Query: 369 FKDAQ----RAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDD 424
+ + R++ +N + LQ+ +ND ++LV LQ+ + +D
Sbjct: 586 SIEDAQNHLDLLKKSRESMGAVNLRADNETKELQDKIDKMMNDRKDLVHGLQKLKSSIND 645
Query: 425 C 425
Sbjct: 646 L 646
>gi|119471820|ref|ZP_01614153.1| putative Bacterial chemotaxis sensory transducer [Alteromonadales
bacterium TW-7]
gi|119445310|gb|EAW26599.1| putative Bacterial chemotaxis sensory transducer [Alteromonadales
bacterium TW-7]
Length = 405
Score = 36.8 bits (82), Expect = 6.6, Method: Composition-based stats.
Identities = 33/295 (11%), Positives = 77/295 (26%), Gaps = 27/295 (9%)
Query: 164 HIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDL 223
+ ++ T + V A + I +
Sbjct: 55 WLLTLVIISGFAFTLFYMRFLIVRPVKAMCDTLIKINQQDANLNAKLPHFSYDEFKTLST 114
Query: 224 ITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDH 283
+ + L E S+ +S N+ + T + +I
Sbjct: 115 QYNDFTSHLSQLLNTTYTSAEASAQSNKAATESMQSTENSSEQQITLSHTIIDASNQITQ 174
Query: 284 LLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLN 343
L + S T + ++ S + + ++ Q I + + + L
Sbjct: 175 SLQNIVGNTDSVHTVNNEH-----LAFVKLSAQDLSSLVEKVQLITDMLGSFASTVDGLK 229
Query: 344 DSSQKFAELMSKINNISALKENNSLFKDAQRA------------MHTFRDTSEKINRYIP 391
++S+ ++ + S +L + A R S K++
Sbjct: 230 ENSENIRSILKMVEEFSDQTNLLALNAAIEAARAGEAGRGFAVVADEVRTLSVKVSGATR 289
Query: 392 SIGN---NLQNFSQSGLNDIQNLVRKLQETVNHF-------DDCLNNFERNPQDI 436
I + + + + + L+ + + LN FE N Q +
Sbjct: 290 QISDFITQMNDLVSETNKESEQLINHSKNAQSSICSTSEGFSKMLNEFESNQQQL 344
>gi|293366590|ref|ZP_06613267.1| cell wall associated fibronectin-binding protein [Staphylococcus
epidermidis M23864:W2(grey)]
gi|291319359|gb|EFE59728.1| cell wall associated fibronectin-binding protein [Staphylococcus
epidermidis M23864:W2(grey)]
Length = 10183
Score = 36.8 bits (82), Expect = 6.8, Method: Composition-based stats.
Identities = 36/359 (10%), Positives = 112/359 (31%), Gaps = 11/359 (3%)
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + P S A + + P I + + ++ +++ +
Sbjct: 3789 LTNDNPQVSQVTAALNKIKAVQPELDKAIA---MLKNKENNNALVQAKQQLQQIVNEVDP 3845
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ M T T + AE+ +K + + I I I+ +
Sbjct: 3846 TQGMTTDTANNYKSKKREAEDEIQKAQQIINNGDATEQQITNETNRVNQAINAINKAKND 3905
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ ++ + + D+ + + I+ ++ + ++ S+ +
Sbjct: 3906 LRADKSQLENAYNQLIQNVDTNGKKPASIQQYQAARQAIETQYNNAKSEAHQILENSNPS 3965
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + + + K ++ + + + + ++
Sbjct: 3966 VNEVAQALQKVEAVQLKVNDAIHILQNKENNSALVTAKNQLQQSVNDQPLTTGMTQDSIN 4025
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + E + + IN + ++D K + ++ +N+ A ++ + +
Sbjct: 4026 NYEAKRNEAQSAIRNAEAVINNGDATAKQISDEKSKVEQALAHLND--AKQQLTADTTEL 4083
Query: 373 QRAMHTFRDTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
Q A+ + N+ SI +L+ S ++ +++K TV ++
Sbjct: 4084 QTAVQQLNRRGDTNNKKPRSINAYNKAIQSLETQITSAKDNANAVIQKPIRTVQEVNNA 4142
>gi|145629062|ref|ZP_01784861.1| DNA repair protein [Haemophilus influenzae 22.1-21]
gi|144978565|gb|EDJ88288.1| DNA repair protein [Haemophilus influenzae 22.1-21]
Length = 451
Score = 36.8 bits (82), Expect = 7.0, Method: Composition-based stats.
Identities = 20/234 (8%), Positives = 76/234 (32%), Gaps = 10/234 (4%)
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
+ + + + D + +++ I + +
Sbjct: 73 QNPAYHWLSEQELQDPDNPTECILRRIINADGRSKAFINSTPVSASQLKEIAQYLVHING 132
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+ +Q + ++ + + + + + + + +++ + E ++Q
Sbjct: 133 QHASQLLLKNDYQLQLVDNFAAHPELLVKMREDYQTWKNLQNQVKTFQQKVAENEARKQL 192
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMH-----TFRDT 382
+ ++ ++ N+ + E +S+ ++ L + A + +
Sbjct: 193 LQYQVDELDEFNLRPNEYLELEDEQRR----LSSSEQLTQLSQSALQILSENDTVNIDSL 248
Query: 383 SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ +YI + L N + + + ++QE + + +N E++PQ +
Sbjct: 249 LYRATQYIDELAE-LDPQYAEVQNMLNDALIQVQEATSEVQNLSSNIEQDPQLL 301
>gi|190894341|ref|YP_001984634.1| putative methyl accepting chemotaxis protein [Rhizobium etli CIAT
652]
gi|190700002|gb|ACE94084.1| probable methyl accepting chemotaxis protein [Rhizobium etli CIAT
652]
Length = 589
Score = 36.8 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 28/293 (9%), Positives = 82/293 (27%), Gaps = 3/293 (1%)
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
S E + ++ + ++ ++S I+ +
Sbjct: 296 AFQLSDRFAPEFEPLRHDFNASVEQLGGTLLSVSKSVSIINSGTREINNGSSELSGRTER 355
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
T T+ + + +I E + ++N +S+ V + +E
Sbjct: 356 QAATLEETAAALDAVTAKVSQAFKIAEEARNVADNANRSAMASGKVVAQTVDAMGQIEES 415
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
++I++++ A + + + A+ + + +
Sbjct: 416 SKQINNIIGVIDQIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVR-ELAQRSAQAARE 474
Query: 338 ITSNLNDSSQKFAELMSKINNI-SALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNN 396
I + +S K A + +N+ +AL + D + M ++ + + +
Sbjct: 475 IKELIGRASAKVASGVELVNHTGAALSDIGRFIVDINQRMEALAASARDQATSLSEVNSA 534
Query: 397 LQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIVWGREKGSVKIYK 449
+ Q + +V + G + + Y+
Sbjct: 535 MGQLDQVTQQN-AAMVEETTAASVTLASEAERLRELVTQFELGGAESGTRSYR 586
>gi|172036172|ref|YP_001802673.1| hypothetical protein cce_1257 [Cyanothece sp. ATCC 51142]
gi|171697626|gb|ACB50607.1| unknown [Cyanothece sp. ATCC 51142]
Length = 760
Score = 36.8 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 18/155 (11%), Positives = 45/155 (29%), Gaps = 2/155 (1%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
+ + + + + N + + R++ D + + ++ +
Sbjct: 259 RGINTRLQEVVNVIDQEIQIANNIQQVREAQPFQNLERQVQDLKVVVSEDAQKLQELQIR 318
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS 401
+ K +I + E+ + + F+ IN +
Sbjct: 319 FQEFEDKVITGRQQIEVLETRVEDLQDLESQINTLQNFKTNF--INNINTEQFQAFLDLD 376
Query: 402 QSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
LN + N V +++ NN ER Q +
Sbjct: 377 FQNLNQLANQVSSIEQVGQELRQTRNNLERASQRV 411
>gi|47208511|emb|CAF96456.1| unnamed protein product [Tetraodon nigroviridis]
Length = 776
Score = 36.8 bits (82), Expect = 7.1, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 67/189 (35%), Gaps = 10/189 (5%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + + +D +F ++ + E A+
Sbjct: 261 SLEKTKQRLQGEVEDLMIDVERANSLAANLDKKQRNFDKV-LAEWKQKYEEGQAELEGAQ 319
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S E+ + ++ +E + + Q+ ++L +I E +
Sbjct: 320 KEARSLSTELFKMKNSYEEALDHLETMKRENKNLQQEISDLTEQI------GETGKSIHE 373
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNN 428
++A T +I + L++ L ++ + ++ + D+ +
Sbjct: 374 LEKAKKTVETEKTEIQAALEEAEGTLEHEEAKILRVQLELNQIKGEVDRKLAEKDEEMEQ 433
Query: 429 FERNPQDIV 437
+RN Q ++
Sbjct: 434 IKRNSQRVI 442
>gi|317030347|ref|XP_001392390.2| hypothetical protein ANI_1_396074 [Aspergillus niger CBS 513.88]
Length = 1333
Score = 36.8 bits (82), Expect = 7.2, Method: Composition-based stats.
Identities = 34/416 (8%), Positives = 117/416 (28%), Gaps = 17/416 (4%)
Query: 24 SIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFN---GIPVGRIVGLFLDQEYPNH 80
+ L D P S SS+R+ G GR+ + +
Sbjct: 706 LVERLQSDMPLDTPNRRTSDYFSDSGS-----SSIRYAFESG---GRVEDIEKYKRTAEQ 757
Query: 81 SLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITAT 140
A+ + L + ++ I ++ LR+E+ + +++ +
Sbjct: 758 ERAQIKVDLGQKLQEERSRRAASEAHVQILESQVQQLRRERVDLSDLSSRTRELEAALDD 817
Query: 141 PSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKM 200
++ + + + R + + N + T+ A S ++
Sbjct: 818 TRRKLAEERQIKDNFEDLLTAMRVELEQLRNERDHMRDTVIPQLQQGGQPAAPSSDPSEV 877
Query: 201 MHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQV 260
+ + + + + + + + S
Sbjct: 878 QRLLEEIEALKIENASLAQLQGSRFASIAEEDGMPTARNVGLGLSRSNSLARVRTKPSPG 937
Query: 261 INTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIRE 320
++ + + + ++ + + + +++ E + + R + A
Sbjct: 938 LSRSSSLSRSNSVSAK--ERNESPRENLADRIEDVEAQRDALHQSLRRLLDRQAHDAREY 995
Query: 321 ITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA-LKENNSLFKDAQRAMHTF 379
R + + + ++ L ++N++ +E ++ +
Sbjct: 996 EKRLRLMEMEIARAQQVGSPRKLGYEREVRNLREEVNDLRQRAEEALEQKWQCEKGLAGL 1055
Query: 380 RDTSEKINRYIPSIGNNLQNFSQSGLNDIQ---NLVRKLQETVNHFDDCLNNFERN 432
+ ++ + S+ LQ + D++ + ++ T + + + +
Sbjct: 1056 KMDLDRAEQETTSLRVILQEHDITVPEDLECDRDGFAEVLATSSSLESAYRQLQAD 1111
>gi|198423307|ref|XP_002120215.1| PREDICTED: similar to viral A-type inclusion protein, putative [Ciona
intestinalis]
Length = 3720
Score = 36.8 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 30/380 (7%), Positives = 101/380 (26%), Gaps = 22/380 (5%)
Query: 67 RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQ 126
+ + L + ++ + +++ + + + ++ ++ +
Sbjct: 746 EVTQIRLQCASDTAAQVESEVSALKNKMEEEMDSLKHKMEVESSEKFETQQKEHERALKD 805
Query: 127 IATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETI 186
+ E + + + E K + + + + E++EK E +
Sbjct: 806 QSDELSSSMETRLSAVMSEFHQQKQEAIQKLNASHNDEVALLKEDLEKSCKDATDKEEQM 865
Query: 187 STVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENI 246
T L S +++ + ++ + + + L
Sbjct: 866 QTALHERDSLQEQLQSMKMELESLQSEYKDKYEEMKSSEANKMQEMKLNHENMVEDLRIT 925
Query: 247 QVSSN--NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHL------------LSDFSSKM 292
+ + + + ++ EV +K + L + +
Sbjct: 926 LEVQHDARLENALQKQAAILQQLKVVATRLVEVTEKKEQLEEIKNQLALQLEEAGVEKEK 985
Query: 293 KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAEL 352
E A L N + + E + S L D ++ +
Sbjct: 986 DLAELKANLVNQHMLKFQEMTMNLEQHHKEQMDEAQEQHHLEEERLRSGLMDLQKRIDVM 1045
Query: 353 MSK---INNISALKENNSLFKDAQRAMHT-----FRDTSEKINRYIPSIGNNLQNFSQSG 404
+ + ++ R + ++ ++ ++ I +Q +
Sbjct: 1046 QEDRNVLEEVVGRSVKQDDVEERIRVLEEEHEQKIKELQDEHELHLKQINEEIQKQDEQH 1105
Query: 405 LNDIQNLVRKLQETVNHFDD 424
+ Q L+ + Q + +
Sbjct: 1106 KSSYQQLIHEQQNQMENLQK 1125
>gi|118359750|ref|XP_001013113.1| SMC family, C-terminal domain containing protein [Tetrahymena
thermophila]
gi|89294880|gb|EAR92868.1| SMC family, C-terminal domain containing protein [Tetrahymena
thermophila SB210]
Length = 1937
Score = 36.8 bits (82), Expect = 7.3, Method: Composition-based stats.
Identities = 30/301 (9%), Positives = 95/301 (31%), Gaps = 10/301 (3%)
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
K++ + Q + + L N +
Sbjct: 651 FKVNCITEKRQIVYSGGFISHVGFCTVAKVDKITLYNEYKSFKAKKDAIAKEIEQLEKSM 710
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ + + + L K + + + + + + +++ + Q+F
Sbjct: 711 NDIQLQQNDINSNVSKEQASLAKQSNTIFMNRQLIKSSEVEKKVLTDELNETNQLLQSFS 770
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
+ + ++ + KS + + ++ I+ T QK + +
Sbjct: 771 QQLKDLEQEKIGLENTSKSSKFEPLNQEDKQKMYKLQE---EIKSKTTVLQKSLKEKQNV 827
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGN 395
E + + Q+ +S+++ +K+ LF+ + + + + + +
Sbjct: 828 EKEYNKYRNEEQQLTNHLSQLSEGGGMKDGEVLFQSIDQRISSSEQDLKHQESILKAQKA 887
Query: 396 NLQNFSQS---GLNDIQNLVRK----LQETVNHFDDCLNNFERNPQDIVWGREKGSVKIY 448
++ +QS I+ + + L+E + + NN E+ ++ +++ K Y
Sbjct: 888 IVEKATQSKKTLEEQIKKIEGESQDKLKEQIQSQQELCNNLEQQISALLLRKQQYISKEY 947
Query: 449 K 449
+
Sbjct: 948 E 948
>gi|154315122|ref|XP_001556884.1| hypothetical protein BC1G_04600 [Botryotinia fuckeliana B05.10]
gi|150847563|gb|EDN22756.1| hypothetical protein BC1G_04600 [Botryotinia fuckeliana B05.10]
Length = 773
Score = 36.8 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 29/350 (8%), Positives = 87/350 (24%), Gaps = 15/350 (4%)
Query: 92 PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNA 151
P S A + + + + + ATP + A
Sbjct: 237 PPGASRHARLVSDSPLSSDSESTGHWYGDSSPGSRPVSATMSIFSSKATPPHNIIPNAPA 296
Query: 152 ENTSKKISDSSRHIQKIIENIE-----KPLTTTIANIETISTVLANNISHIDKMMHTTQV 206
+ + + DS+ IQK + ++ + +T + + +
Sbjct: 297 RSYTHESHDSTSTIQKPKSPGKLGSFFSSWGGAVSPSSSTTTFSEDKADYSPNSPIPSSN 356
Query: 207 TPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHD 266
S+ + T I + + + V +
Sbjct: 357 ASPHKLSEFEDSQSRTHNTKAPPAAIDIPKANADAAHYFENAYLQIPIATPSPPPLIVEE 416
Query: 267 VRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQ 326
+ + + D + + A S A + +
Sbjct: 417 MERELKDISQELASSIRREMDLEDLVDRLQLEAQNSGTNSSKRTSDYFSDAGTSVIPRYG 476
Query: 327 KIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKI 386
+ ++ I ++ L++ ++ K+ + + + + + ++
Sbjct: 477 DPDPKQDELDRIQRKTEQEKASI-----RLELTDKLQDERAIRKELETQIRSLEERAAQV 531
Query: 387 NRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+ + + L +++ L+ ++ NFE +
Sbjct: 532 D-----LAAINSVDANGRLKELEATCEDLRRKLSEEKQIRENFEDLLTAL 576
>gi|256682103|gb|ACV07677.1| NUP-1 [Trypanosoma cruzi]
Length = 2577
Score = 36.8 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 32/343 (9%), Positives = 99/343 (28%), Gaps = 6/343 (1%)
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
+ + + + + + Q AT + + + + K
Sbjct: 486 QVIVNFNRRLQDQFSTIQVQKAQIDLLQQEATRASVAITPSKAAPVNSRPEGGNGDKETK 545
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ A ET+ V A N+ + T
Sbjct: 546 NGMPPETPGVAETTMATQHKEAQAVRETVQAVSAENVKSQVEDRGKAHKTEGEVPQFPQQ 605
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEV 277
+ ++ ++V ++ + ++ V ++RET ++
Sbjct: 606 LSAAHAAIDQLSAERSAQAERVAELTAAVARLESSADAPERVVEALSAELRETQDRLRQA 665
Query: 278 GQKIDHLLSDFSSKM----KSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTIN 333
++ L S + T + ++A S+ ++ + E + + + +
Sbjct: 666 EEEASQLAERIGSSEGLRESAVATRSAETSLAAQLSSALKALEQLAEERETLARGSAELE 725
Query: 334 TIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSI 393
+Q ++ S + ++ ++ + + +E++ ++
Sbjct: 726 ERVRELEQELREAQTAHDVDSS-DGLTLREQLAAAHAAIDQLSAERSAQAERVAELTAAV 784
Query: 394 GNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
L++ + + ++ L +L+ET + + Q I
Sbjct: 785 AR-LESSADAPERVVEALSAELRETQDRLRQAEEEASQLAQRI 826
>gi|253732074|ref|ZP_04866239.1| possible cell wall associated fibronectin-binding protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253724190|gb|EES92919.1| possible cell wall associated fibronectin-binding protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
Length = 1136
Score = 36.8 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 33/286 (11%), Positives = 84/286 (29%), Gaps = 5/286 (1%)
Query: 153 NTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSD 212
I+ + + + I N+ A + I ++ + + ++ +
Sbjct: 137 TNVNDINGAIQTVNDAIHNLNGDQRLQDAKDKAIQSINQALANKLKEIEASNATDQDKLI 196
Query: 213 SKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQ 272
+KN + + I + + Q N + + + I+ DV + Q
Sbjct: 197 AKNKAEELANSIINNINKATSNQAVSQVQTAGNHAIEQVHANEIPKAKIDANKDVDKQVQ 256
Query: 273 TFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTI 332
+ + +L +K + + D +N + + Q +
Sbjct: 257 ALIDEIDRNPNLTDKEKQALKDRINQILQQGHNDI-NNALTKEEIEQAKAQLAQALQDIK 315
Query: 333 NTIENITSNLNDSSQKFAELMSKINNI--SALKENNSLFKDAQRAMHTFRDTSEKI--NR 388
+ ++ D ++ L+ +I+ KE +L + + +
Sbjct: 316 DLVKAKEDAKQDVDKQVQALIDEIDQNPNLTDKEKQALKDRINQILQQGHNDINNAMTKE 375
Query: 389 YIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQ 434
I L Q N ++ Q+ ++ +RNP
Sbjct: 376 AIEQAKERLAQALQEIKNLVKAKENAKQDVDKRVQALIDEIDRNPN 421
>gi|260791480|ref|XP_002590757.1| hypothetical protein BRAFLDRAFT_78173 [Branchiostoma floridae]
gi|229275953|gb|EEN46768.1| hypothetical protein BRAFLDRAFT_78173 [Branchiostoma floridae]
Length = 2388
Score = 36.8 bits (82), Expect = 7.5, Method: Composition-based stats.
Identities = 16/184 (8%), Positives = 60/184 (32%), Gaps = 5/184 (2%)
Query: 255 KSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE--TSAFLENIADSTSNMR 312
K + + ++R + + L D + K E + + ++D
Sbjct: 1891 KQVSTLEVELKNLRGQLSGKDQQISTLQKQLGDAGTAKKKLEGELAQLKKQLSDFQKQAG 1950
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ A +++ + ++ ++ + + + +K +S++ + DA
Sbjct: 1951 DAGGAKKKLEAELAQLKKQLSDFQKQAGDAGGAKKKLEAELSQLKKQL--SDFQKQAGDA 2008
Query: 373 QRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERN 432
A ++ + + + + ++ + +L++ ++ + ER
Sbjct: 2009 GSAKQKLEAELSQLKKQLSDFQKQAGDAGGAK-KKLEGDLAELRKQLSEQNRAKAELERQ 2067
Query: 433 PQDI 436
+
Sbjct: 2068 ANKL 2071
>gi|297539091|ref|YP_003674860.1| integral membrane sensor signal transduction histidine kinase
[Methylotenera sp. 301]
gi|297258438|gb|ADI30283.1| integral membrane sensor signal transduction histidine kinase
[Methylotenera sp. 301]
Length = 562
Score = 36.8 bits (82), Expect = 7.6, Method: Composition-based stats.
Identities = 42/436 (9%), Positives = 121/436 (27%), Gaps = 26/436 (5%)
Query: 1 MESKN---YYTSVGLFVVSILF---FSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLST 54
M K + +G F++ L ++ +R + R +VD
Sbjct: 1 MLRKALPIRFILLGAFLLVGLLPTMLVTGMAFFEARGALKTEIKHDTQTRATATVD---- 56
Query: 55 DSSVRFNGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
I + ++ + S ++ I D + ++ L+ + Y
Sbjct: 57 ------------EIDRIMFERLHNTASWSQLEIMQDVRI--DDLDKRLSKFLSDLKYSYH 102
Query: 115 STLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEK 174
+ + + A S + + I + +++ I
Sbjct: 103 DIYHELYVVDNKGIVIASSNAESIGKQSPHYSDWLSTKIQGNNIHIAPIMQEQL--KISA 160
Query: 175 PLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAI 234
+ + + V N S I ++ + + N + + T +
Sbjct: 161 DIKDAFDGNKLGTLVTVFNWSQITNILEGAVSGRSGAALLDGNNKVLSMTTHWSDIQTKE 220
Query: 235 DLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKS 294
L ++ + + + + +L+ + +
Sbjct: 221 KLSTSSKSKGYQGYNGFKWHVVIAEYRLDALAPIQQMAYIFIGLLIATIILASLIAFPVA 280
Query: 295 KETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMS 354
+ L + +N S + I + N S + + ++ E ++
Sbjct: 281 TALTQPLVKLTAFANNFIREPSNALPPSTSNLVEPVEITALSNAFSKMINDLERSKENLT 340
Query: 355 KINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
+ ++ + E + R +S ++ P+I +++ + L +
Sbjct: 341 RAAKLAVVGEMAAAMSHEVRTPLGILRSSAQVLLREPNISEEGHEVCGFIISETERLNKL 400
Query: 415 LQETVNHFDDCLNNFE 430
+ ++ L +F+
Sbjct: 401 VSALIDSARPRLPDFK 416
>gi|260772165|ref|ZP_05881082.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
metschnikovii CIP 69.14]
gi|260613032|gb|EEX38234.1| uncharacterized ABC transporter, periplasmic component YrbD [Vibrio
metschnikovii CIP 69.14]
Length = 148
Score = 36.8 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 2/118 (1%)
Query: 14 VVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRIVGLFL 73
+++ + I+ ++ + ++ L S V+ G+ VGR+ + L
Sbjct: 1 MLAGICAILIMIFHVADVKGLGSNDTYSLTAEFDNIGNLKVRSPVKVGGVVVGRVSDIQL 60
Query: 74 DQEYPNHSLAKALIRPDT-PLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
D+ I +++ I T GL G YI L +
Sbjct: 61 DRHRLLPV-VTMAIDSQYDQFSENSSVKILTSGLIGEQYIGLVPGFVFDDEQMLKDGD 117
>gi|1339977|dbj|BAA12730.1| skeletal myosin heavy chain [Thunnus thynnus]
Length = 786
Score = 36.8 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 31/296 (10%), Positives = 85/296 (28%), Gaps = 10/296 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E + I + + + ++ E M
Sbjct: 156 QAYTQQIEELKRHIEEEIKAKNALAHAVQSARHDCDLLREQYEEEQEAKGELQRGMSKAN 215
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
T K A LQ + +E + + K+ ++ V
Sbjct: 216 SEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEESIEAVNSKCASLEKTKQRLQGEV 275
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQ 324
D+ + + +D +F + + E ++ + + S E+
Sbjct: 276 EDLMIDVERANSLAANLDKKQRNFDKV-LADWKQKYEEGQSELEGAQKEARSLSTELFKM 334
Query: 325 RQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE 384
+ ++ +E + + Q+ ++L +I E + ++A
Sbjct: 335 KNSYEEALDHLETMKRENKNLQQEISDLTEQI------GETGKSIHELEKAKKHVETEKT 388
Query: 385 KINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+I + L++ L ++ + ++ + D+ + +RN Q ++
Sbjct: 389 EIQTALEEAEGTLEHEEAKILRVQLELNQIKSEVDRKLAEKDEEMEQIKRNSQRVI 444
>gi|254525553|ref|ZP_05137605.1| heat shock protein GrpE [Prochlorococcus marinus str. MIT 9202]
gi|221536977|gb|EEE39430.1| heat shock protein GrpE [Prochlorococcus marinus str. MIT 9202]
Length = 239
Score = 36.8 bits (82), Expect = 7.7, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 48/124 (38%), Gaps = 1/124 (0%)
Query: 314 SISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQ 373
I + D ++K IS + S+ +S+ + EL S+ +E + +
Sbjct: 1 MIENQSDNIDNKEKDISNQDNAPEDISSEQNSTNENDELTSQKKEAINTEELKNTISNND 60
Query: 374 RAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL-VRKLQETVNHFDDCLNNFERN 432
+ E + I + NF + D +L ++ + +T+ ++NFER
Sbjct: 61 ARLKQLEKEHETLKNQYVRISADFDNFRKRQSRDQDDLKIQLVSKTLTAILPIVDNFERA 120
Query: 433 PQDI 436
Q +
Sbjct: 121 RQQL 124
>gi|300362402|ref|ZP_07058578.1| cell division protein FtsH [Lactobacillus gasseri JV-V03]
gi|300353393|gb|EFJ69265.1| cell division protein FtsH [Lactobacillus gasseri JV-V03]
Length = 708
Score = 36.8 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 14/78 (17%)
Query: 1 MESKNYYTSV-GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+++ GLF + + I W + IR V L
Sbjct: 1 MKNRRNRLLSNGLFYIIVFVILLAGINWA--VGGSGSNGSTENIRYSQLVKDLKA----- 53
Query: 60 FNGIPVGRIVGLFLDQEY 77
G++ + +
Sbjct: 54 ------GKVKSINVQPSN 65
>gi|59711745|ref|YP_204521.1| methyl-accepting chemotaxis protein, TcpI-related [Vibrio fischeri
ES114]
gi|59479846|gb|AAW85633.1| methyl-accepting chemotaxis protein, TcpI-related [Vibrio fischeri
ES114]
Length = 620
Score = 36.8 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 42/443 (9%), Positives = 108/443 (24%), Gaps = 39/443 (8%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAE-------------VIIRIPGSVDGLSTDSSV 58
+ ++ L L S + E +++GL
Sbjct: 5 ITLIFCLVILTTLALTLVASGSFLKSYKENNMTHASKIALDVTQANFNAAINGLY----- 59
Query: 59 RFNGIPVGRIVG----LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIEL 114
G I + LD P D T + L G +
Sbjct: 60 -------GSIKSLSAAIELDPNQPFDEKLILGNIQDIVKSNKTYTNVILSNLNGDVFSVA 112
Query: 115 STLRKEKKTIFQIATER-NQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ + E N + ++SN+ S +I+ I
Sbjct: 113 ANGWHPTFNAIKGNREWFNSIMQDKKEANISTPYLSNSGIYEITASAPLLFNNEIVGVIA 172
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+ + ++ S + + + + + +
Sbjct: 173 VGVNLNVLIPDSGIEFALTTQSGHIVAIDSNSPDWLNKNLFEIRPEYKGVTDKPMFIDAG 232
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT------FQEVGQKIDHLLSD 287
+ L + ++R + + + +
Sbjct: 233 DNEFFSLTKLPLSHGLVGYVFTNQTTTFENAQNIRTALISVLVILGLVLTLAQFIVVRKE 292
Query: 288 FSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQ 347
S + + + ++ + + I IT+ + + S I+ + T+ +
Sbjct: 293 LSQIPNVVSNIQLMASGDFTNLSIPKTGNEIDLITESLESLQSRISGVMTTTNTIMYKLS 352
Query: 348 KFAELMSKI--NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
+ E +S++ NN++ + A+ T+ I S +
Sbjct: 353 EHQEQISEVTNNNVTRSESELQHIDQVAAAITEMATTANDIAANALSAEGETST-TLVLS 411
Query: 406 NDIQNLVRKLQETVNHFDDCLNN 428
+D +++ V+ +
Sbjct: 412 SDSLKTLQESSSIVDRVSSSVKE 434
>gi|325093433|gb|EGC46743.1| kinesin motor domain-containing protein [Ajellomyces capsulatus
H88]
Length = 801
Score = 36.8 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 30/323 (9%), Positives = 96/323 (29%), Gaps = 13/323 (4%)
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ T + T S + + E + + +PL+ +
Sbjct: 42 MMPPPGTISRKHVESIVTESAMQTRKTLVERGGETRKKTHLGHSASKSMNSRPLSALSTS 101
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ A+ + ++ + + + S + A +
Sbjct: 102 TSSRPASAASRNAPHNQTSSSHGPSSRTRPSAHNIGRPQTSFGYSHSHRVASPRPVTSMS 161
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF-L 301
+ + K + + + + + + + + ++ E L
Sbjct: 162 TRDDDSQDSVLGKRKVEAWDQDAKMEKMNAMCDLLLNRFQGTTNQSAGLKEAIELYKSRL 221
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + + S + A+R D + + TI S ++ + E +I+ ++
Sbjct: 222 QEVEEKNSQLSERNIALRVDLDTTKSRLLTIENNLKDVSRDHEIAIDDLERQHRIDLDAS 281
Query: 362 LKENNSLFKDA----QRAMHTFRDTSEK--------INRYIPSIGNNLQNFSQSGLNDIQ 409
+E + ++ + M R + + + + I + Q +++
Sbjct: 282 RQEASKRIEELAVKHKEEMRELRSRFDNEIENERNRLRQELNQINSQTAIDLQRSQIEME 341
Query: 410 NLVRKLQETVNHFDDCLNNFERN 432
N R+L++ + +++ +R
Sbjct: 342 NRDRELRDIQAEVNRLMSDLDRE 364
>gi|268318838|ref|YP_003292494.1| ATP-dependent metalloprotease FtsH [Lactobacillus johnsonii
FI9785]
gi|262397213|emb|CAX66227.1| ATP-dependent metalloprotease FtsH [Lactobacillus johnsonii
FI9785]
Length = 708
Score = 36.8 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 14/78 (17%)
Query: 1 MESKNYYTSV-GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+++ GLF + + I W + IR V L
Sbjct: 1 MKNRRNRLLSNGLFYIIVFVILLAGINWA--VGGSGSNGSTENIRYSQLVKDLKA----- 53
Query: 60 FNGIPVGRIVGLFLDQEY 77
G++ + +
Sbjct: 54 ------GKVKSINVQPSN 65
>gi|116628950|ref|YP_814122.1| ATP-dependent Zn protease [Lactobacillus gasseri ATCC 33323]
gi|238853549|ref|ZP_04643921.1| ATP-dependent metallopeptidase HflB [Lactobacillus gasseri 202-4]
gi|282852628|ref|ZP_06261970.1| ATP-dependent metallopeptidase HflB [Lactobacillus gasseri 224-1]
gi|116094532|gb|ABJ59684.1| membrane protease FtsH catalytic subunit [Lactobacillus gasseri
ATCC 33323]
gi|238833845|gb|EEQ26110.1| ATP-dependent metallopeptidase HflB [Lactobacillus gasseri 202-4]
gi|282556370|gb|EFB61990.1| ATP-dependent metallopeptidase HflB [Lactobacillus gasseri 224-1]
Length = 708
Score = 36.8 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 14/78 (17%)
Query: 1 MESKNYYTSV-GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+++ GLF + + I W + IR V L
Sbjct: 1 MKNRRNRLLSNGLFYIIVFVILLAGINWA--VGGSGSNGSTENIRYSQLVKDLKA----- 53
Query: 60 FNGIPVGRIVGLFLDQEY 77
G++ + +
Sbjct: 54 ------GKVKSINVQPSN 65
>gi|42518369|ref|NP_964299.1| cell division protein FtsH-like protein [Lactobacillus johnsonii
NCC 533]
gi|41582654|gb|AAS08265.1| cell division protein FtsH-like protein [Lactobacillus johnsonii
NCC 533]
Length = 708
Score = 36.8 bits (82), Expect = 7.8, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 14/78 (17%)
Query: 1 MESKNYYTSV-GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+++ GLF + + I W + IR V L
Sbjct: 1 MKNRRNRLLSNGLFYIIVFVILLAGINWA--VGGSGSNGSTENIRYSQLVKDLKA----- 53
Query: 60 FNGIPVGRIVGLFLDQEY 77
G++ + +
Sbjct: 54 ------GKVKSINVQPSN 65
>gi|240276075|gb|EER39588.1| kinesin motor domain-containing protein [Ajellomyces capsulatus
H143]
Length = 801
Score = 36.8 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 30/323 (9%), Positives = 96/323 (29%), Gaps = 13/323 (4%)
Query: 123 TIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIAN 182
+ T + T S + + E + + +PL+ +
Sbjct: 42 MMPPPGTISRKHVESIVTESAMQTRKTLVERGGETRKKTHLGHSASKSMNSRPLSALSTS 101
Query: 183 IETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQI 242
+ A+ + ++ + + + S + A +
Sbjct: 102 TSSRPASAASRNAPHNQTSSSHGPSSRTRPSAHNIGRPQTSFGYSHSHRVASPRPVTSMS 161
Query: 243 LENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF-L 301
+ + K + + + + + + + + ++ E L
Sbjct: 162 TRDDDSQDSVLGKRKVEAWDQDAKMEKMNAMCDLLLNRFQGTTNQSAGLKEAIELYKSRL 221
Query: 302 ENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISA 361
+ + + S + A+R D + + TI S ++ + E +I+ ++
Sbjct: 222 QEVEEKNSQLSERNIALRVDLDTTKSRLLTIENNLKDVSRDHEIAIDDLERQHRIDLDAS 281
Query: 362 LKENNSLFKDA----QRAMHTFRDTSEK--------INRYIPSIGNNLQNFSQSGLNDIQ 409
+E + ++ + M R + + + + I + Q +++
Sbjct: 282 RQEASKRIEELAVKHKEEMRELRSRFDNEIENERNRLRQELNQINSQTAIDLQRSQIEME 341
Query: 410 NLVRKLQETVNHFDDCLNNFERN 432
N R+L++ + +++ +R
Sbjct: 342 NRDRELRDIQAEVNRLMSDLDRE 364
>gi|237726670|ref|ZP_04557151.1| conserved hypothetical protein [Bacteroides sp. D4]
gi|229435196|gb|EEO45273.1| conserved hypothetical protein [Bacteroides dorei 5_1_36/D4]
Length = 355
Score = 36.8 bits (82), Expect = 8.0, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 16/65 (24%), Gaps = 6/65 (9%)
Query: 52 LSTDSSVRF------NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L V G+ G I + + KA + L+ + +
Sbjct: 220 LKVGDKVEITPYASAAGVRQGSISEINPLVDENGMVRVKARVNGSNKLFDGMNVRVSVKR 279
Query: 106 LAGIT 110
G
Sbjct: 280 SVGEQ 284
>gi|325295627|ref|YP_004282141.1| chromosome segregation protein SMC [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325066075|gb|ADY74082.1| chromosome segregation protein SMC [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 1168
Score = 36.4 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 35/371 (9%), Positives = 105/371 (28%), Gaps = 12/371 (3%)
Query: 64 PVGRIVGLFLDQEYPNHSLA---KALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKE 120
VG + + +++ P S I + S + + E
Sbjct: 579 DVGNVKKIEIEEAKPVISHVKPKDLRILNLVNVLFSNVFFVPSGAERLARKYPQCVFIDE 638
Query: 121 KKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+ IF + + + N + + +Q + I + +
Sbjct: 639 ELNIFTGTGSIVG-KFKKNSLLEMEKELENLKEKLTREEKVLSCLQSKVLPIREEIDEKE 697
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
I+++ + + ++ + + + +
Sbjct: 698 EGIDSLKEAIQQKKMELFEVGSKIKEARRKLADLERKENELEDKLKRAVESINSYNSRKD 757
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAF 300
L+ I+ S + ++ D+++ +++ +S + +++
Sbjct: 758 IFLQKIESLSKKKDELVKEIEKLEEDIKKLEANIGIEKEELSKYVS--KKILLAEKLKNL 815
Query: 301 LENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNIS 360
E +R+ I EI + +K + + E + +I
Sbjct: 816 KERKESKERFVRTLQKEIEEIEKRIEKDEENLKKAAIGVKRAEEILGGVDESIDEIKKEL 875
Query: 361 AL-----KENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKL 415
L E S+ K + A+ + ++ + + F +I + + +L
Sbjct: 876 QLLEERRGEITSMVKTKEEALKSKNKDLSEVQNKLKETEVAVARF-NVKEEEIISKILEL 934
Query: 416 QETVNHFDDCL 426
+++V+ +
Sbjct: 935 EKSVSDALEAA 945
>gi|254506593|ref|ZP_05118734.1| ATPase involved in DNA repair [Vibrio parahaemolyticus 16]
gi|219550466|gb|EED27450.1| ATPase involved in DNA repair [Vibrio parahaemolyticus 16]
Length = 1013
Score = 36.4 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 26/262 (9%), Positives = 74/262 (28%), Gaps = 3/262 (1%)
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
TI + + + + ++ + Q T + +
Sbjct: 365 QTIKSKLSEKQRVDAQCTSLETLAAEQQQTLTQYIAHKQSLEQQAEEGKAKYELARQQHH 424
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + +I + + Q Q + + + ++
Sbjct: 425 ERPAVEASIVRLQRSMSDLQKFAQLKNELSSQQKQLTPLEIQLANANQALLEATQQADRL 484
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNL--NDSSQKFAELMSK 355
+ + + + + E IT +++ L ++
Sbjct: 485 DWAWHSAQAAVLAQKLQDKVPCPVCGSEEHPNPARFDGEEITKEQVEQARAKERQALNTQ 544
Query: 356 INNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNL-VRK 414
+S+L++ SL +++ + + + +QS L +I++L +
Sbjct: 545 QQAMSSLEQQQSLIAASEKRVAETAAELGALAQADHIALEEELKSNQSKLKEIESLDLAN 604
Query: 415 LQETVNHFDDCLNNFERNPQDI 436
L+ TV +N ER ++
Sbjct: 605 LERTVTELIQRSDNGERKIAEL 626
>gi|329666678|gb|AEB92626.1| cell division protein FtsH-like protein [Lactobacillus johnsonii
DPC 6026]
Length = 708
Score = 36.4 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 14/78 (17%)
Query: 1 MESKNYYTSV-GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+++ GLF + + I W + IR V L
Sbjct: 1 MKNRRNRLLSNGLFYIIVFVILLAGINWA--VGGSGSNGSTENIRYSQLVKDLKA----- 53
Query: 60 FNGIPVGRIVGLFLDQEY 77
G++ + +
Sbjct: 54 ------GKVKSINVQPSN 65
>gi|305662303|gb|ADM62267.1| DNA repair protein [Bisgaardia genomosp. 1]
Length = 450
Score = 36.4 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 19/180 (10%), Positives = 55/180 (30%), Gaps = 3/180 (1%)
Query: 257 SDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSIS 316
+ + Q +D+ + +E+ +++ + +
Sbjct: 114 QFLIQINSQHASQQLLKNDHQLQLVDNFCAHDQLIKNMQESYRTWKDLQLQVKTFQQKCA 173
Query: 317 AIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAM 376
Q + ++ + + ++ L S + + L + +
Sbjct: 174 ENEAKKQLLQYQVEELDQFSLKENEYLELEEEHTRLSSSEELTALSQSALQLLSENESV- 232
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
K N+YI + QN+S + ++ + ++QE + N E++P +
Sbjct: 233 -NIDTLLYKTNQYINELCQLDQNYSGA-QKMLEEALIQIQEATSEIQHLSANIEQDPTRL 290
>gi|227888867|ref|ZP_04006672.1| M41 family endopeptidase FtsH [Lactobacillus johnsonii ATCC
33200]
gi|227850704|gb|EEJ60790.1| M41 family endopeptidase FtsH [Lactobacillus johnsonii ATCC
33200]
Length = 708
Score = 36.4 bits (81), Expect = 8.2, Method: Composition-based stats.
Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 14/78 (17%)
Query: 1 MESKNYYTSV-GLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVR 59
M+++ GLF + + I W + IR V L
Sbjct: 1 MKNRRNRLLSNGLFYIIVFVILLAGINWA--VGGSGSNGSTENIRYSQLVKDLKA----- 53
Query: 60 FNGIPVGRIVGLFLDQEY 77
G++ + +
Sbjct: 54 ------GKVKSINVQPSN 65
>gi|39935545|ref|NP_947821.1| methyl-accepting chemotaxis receptor/sensory transducer
[Rhodopseudomonas palustris CGA009]
gi|39649398|emb|CAE27920.1| methyl-accepting chemotaxis receptor/sensory transducer
[Rhodopseudomonas palustris CGA009]
Length = 579
Score = 36.4 bits (81), Expect = 8.4, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 56/213 (26%), Gaps = 8/213 (3%)
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ ++Q V E + S + H+ Q E ++ +
Sbjct: 354 QASANVQSVASATEEMASSVTEISRQVQDSARIAHEAVTQAQRTNERVGELSQAATRIGD 413
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
++ T A N+ + + ++ + E + SQ
Sbjct: 414 VVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALA-EQTAKATGEISQHIG 472
Query: 351 ELMSKI-NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN--- 406
+ + +++A++E S T E+ I N+Q +
Sbjct: 473 GIQAATHESVNAIREIGSTISKMSEIASTIASAVEEQGAATQEISRNVQQAAMGTQQVSA 532
Query: 407 ---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
D+Q + + + +
Sbjct: 533 SVVDVQRGANETGSASTQVLSAAQSLANDSNRL 565
>gi|325264337|ref|ZP_08131068.1| alpha-L-fucosidase 1 [Clostridium sp. D5]
gi|324030408|gb|EGB91692.1| alpha-L-fucosidase 1 [Clostridium sp. D5]
Length = 1706
Score = 36.4 bits (81), Expect = 8.5, Method: Composition-based stats.
Identities = 37/404 (9%), Positives = 100/404 (24%), Gaps = 28/404 (6%)
Query: 56 SSVRFNGIPVGRIVGLFLDQ---EYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYI 112
S V NG VG + + ++ + Y + T ++ L +I
Sbjct: 1022 SDVLVNGESVGAVESYTFTGVSADAAITAVFGFHNYTASNPYNFPSVTDESKALEAEHFI 1081
Query: 113 ELSTLRKEKKTIF-----------------QIATERNQRAMITATPSGINYFISNAENTS 155
+T E+ + A + + + +
Sbjct: 1082 LTNTGDNEQWPLQISSSGWASNGKFVNAMNSGDKITLPYLAEKAGKYKVTVTFRSGDPNN 1141
Query: 156 KKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKN 215
+ + A + ++ D +
Sbjct: 1142 GFSWVEESGKIEAGTKSAGASDSAGATHTETFEMNVVTAGAGSLVLTAGAKNAPQLDKFD 1201
Query: 216 TFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQ 275
+ A + ++ E + + + + T T
Sbjct: 1202 LVLKEEGGAAVDKTALNASITEAEGKLAEEGKYTQETLDALQTALDTAKDTAEDETATEA 1261
Query: 276 EVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTI 335
EV +D L + + + + + + +S + T + + +
Sbjct: 1262 EVKTALDALNEAIAGLEEIEVPKPDKTALNAAIAEAEGKLSEEGKYTQETVDALQSALDT 1321
Query: 336 ENITSNLNDSSQK-----FAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYI 390
+ ++S++ L KI+ + + A+ + +Y
Sbjct: 1322 AKGVAENEEASEEEIKTALDTLTEKISALEEIGVPQPDKTALNEAIVKAESKLSEEGKYT 1381
Query: 391 PSIGNNLQ---NFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
LQ N ++ + ++QE + ++ + N +
Sbjct: 1382 QETREALQAALNAAKEVSENEDAAKDQIQEALTALNEAIFNLKE 1425
>gi|326384191|ref|ZP_08205873.1| MMPL domain protein [Gordonia neofelifaecis NRRL B-59395]
gi|326197056|gb|EGD54248.1| MMPL domain protein [Gordonia neofelifaecis NRRL B-59395]
Length = 1022
Score = 36.4 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 53/154 (34%), Gaps = 7/154 (4%)
Query: 278 GQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIEN 337
++D + + S + A +++ D R ++ + +
Sbjct: 457 VSRLDAVEAVRSITRPDGKPLTESAAGYVPGRVGHELDGAAKQMADARPDLLRLASGVGR 516
Query: 338 ITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNL 397
+T ++++ + EL++ + + + D+ A TF + + S + L
Sbjct: 517 LTDGADEANSRMPELVAGTDQVVTMAGG---VLDSLDAAQTFIAAATDGRSDLTSATDTL 573
Query: 398 QNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFER 431
+ L+ + V L+ ++ F+R
Sbjct: 574 RR----SLDAVSPAVADLRRGAAAAQPAIDEFDR 603
>gi|239906594|ref|YP_002953335.1| methyl-accepting chemotaxis protein [Desulfovibrio magneticus RS-1]
gi|239796460|dbj|BAH75449.1| methyl-accepting chemotaxis protein [Desulfovibrio magneticus RS-1]
Length = 694
Score = 36.4 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 49/442 (11%), Positives = 117/442 (26%), Gaps = 24/442 (5%)
Query: 9 SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVGRI 68
VG F+V+ + LS + + V +V L ++ G V R+
Sbjct: 27 LVGGFLVTAAITLIVGLVGLSGLSNVTSHLQTVTDVSLPTVRDLQL---IKIAGETV-RV 82
Query: 69 VGLFL----------DQEYPNHSLAKALIRPDT----PLYPSTTA-TIRTQGLAGITYIE 113
L D++Y N + + R L S A + +
Sbjct: 83 AQRSLLIPGLDQKDRDRQYENIARVRDTYRKSWDEYDKLPKSPEAERLWREFGPAWQEWV 142
Query: 114 LSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIE 173
+ T+ + A++ + + ++ S + + +
Sbjct: 143 KINNETFELAKQWDKTDIDDPAVLRQKIYLFRGDHYKLLDDAYGLALSGKPLAGGDNPEQ 202
Query: 174 KPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKA 233
+A+ + D ++ + K L +
Sbjct: 203 CNFGQWMASTGRNINNPVFKKAIQDLRQVHEKLHRGVARLKEMAAKNAPKEEMLTLVRTD 262
Query: 234 IDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMK 293
I + + ++ + + +D L+ S
Sbjct: 263 IHEPVEQTVAQFNLMADEVGRVEEIYARMRQDAMVTVRDKQIRCFELLDRLM--TLSVAD 320
Query: 294 SKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELM 353
++++ A E A + + I+ + I + + A +
Sbjct: 321 AEKSQAEGEAAAAKARMIAIVGIGFGVVMALLLGIVISRMITRPILLGVRAAEGLAAGDL 380
Query: 354 SKINNISALKENNSLFKDAQRAMHTFRDTSEKIN---RYIPSIGNNLQNFSQSGLNDIQN 410
++ I E L K + + R+ ++ + S L +QS
Sbjct: 381 NQRIEIDQKDEIGDLAKALRHMIEKLREVVGQVQSGAENVASGSEELSATTQSLSQGATE 440
Query: 411 LVRKLQETVNHFDDCLNNFERN 432
++E + ++ N +N
Sbjct: 441 QAASVEEISSSMEEMAANIRQN 462
>gi|212691021|ref|ZP_03299149.1| hypothetical protein BACDOR_00511 [Bacteroides dorei DSM 17855]
gi|294776923|ref|ZP_06742384.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
PC510]
gi|212666253|gb|EEB26825.1| hypothetical protein BACDOR_00511 [Bacteroides dorei DSM 17855]
gi|294449171|gb|EFG17710.1| efflux transporter, RND family, MFP subunit [Bacteroides vulgatus
PC510]
Length = 357
Score = 36.4 bits (81), Expect = 8.6, Method: Composition-based stats.
Identities = 9/65 (13%), Positives = 16/65 (24%), Gaps = 6/65 (9%)
Query: 52 LSTDSSVRF------NGIPVGRIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQG 105
L V G+ G I + + KA + L+ + +
Sbjct: 222 LKVGDKVEITPYASAAGVRQGSISEINPLVDENGMVRVKARVNGSNKLFDGMNVRVSVKR 281
Query: 106 LAGIT 110
G
Sbjct: 282 SVGEQ 286
>gi|205716959|sp|Q5HPA2|EBH_STAEQ RecName: Full=Extracellular matrix-binding protein ebh; AltName:
Full=ECM-binding protein homolog
Length = 9439
Score = 36.4 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 36/359 (10%), Positives = 112/359 (31%), Gaps = 11/359 (3%)
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + P S A + + P I + + ++ +++ +
Sbjct: 3045 LTNDNPQVSQVTAALNKIKAVQPELDKAIA---MLKNKENNNALVQAKQQLQQIVNEVDP 3101
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ M T T + AE+ +K + + I I I+ +
Sbjct: 3102 TQGMTTDTANNYKSKKREAEDEIQKAQQIINNGDATEQQITNETNRVNQAINAINKAKND 3161
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ ++ + + D+ + + I+ ++ + ++ S+ +
Sbjct: 3162 LRADKSQLENAYNQLIQNVDTNGKKPASIQQYQAARQAIETQYNNAKSEAHQILENSNPS 3221
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + + + K ++ + + + + ++
Sbjct: 3222 VNEVAQALQKVEAVQLKVNDAIHILQNKENNSALVTAKNQLQQSVNDQPLTTGMTQDSIN 3281
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + E + + IN + ++D K + ++ +N+ A ++ + +
Sbjct: 3282 NYEAKRNEAQSAIRNAEAVINNGDATAKQISDEKSKVEQALAHLND--AKQQLTADTTEL 3339
Query: 373 QRAMHTFRDTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
Q A+ + N+ SI +L+ S ++ +++K TV ++
Sbjct: 3340 QTAVQQLNRRGDTNNKKPRSINAYNKAIQSLETQITSAKDNANAVIQKPIRTVQEVNNA 3398
>gi|27468046|ref|NP_764683.1| ebhA protein [Staphylococcus epidermidis ATCC 12228]
gi|81842835|sp|Q8CP76|EBH_STAES RecName: Full=Extracellular matrix-binding protein ebh; AltName:
Full=ECM-binding protein homolog
gi|27315591|gb|AAO04725.1|AE016747_222 ebhA protein [Staphylococcus epidermidis ATCC 12228]
Length = 9439
Score = 36.4 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 36/359 (10%), Positives = 112/359 (31%), Gaps = 11/359 (3%)
Query: 73 LDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERN 132
L + P S A + + P I + + ++ +++ +
Sbjct: 3045 LTNDNPQVSQVTAALNKIKAVQPELDKAIA---MLKNKENNNALVQAKQQLQQIVNEVDP 3101
Query: 133 QRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLAN 192
+ M T T + AE+ +K + + I I I+ +
Sbjct: 3102 TQGMTTDTANNYKSKKREAEDEIQKAQQIINNGDATEQQITNETNRVNQAINAINKAKND 3161
Query: 193 NISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNN 252
+ ++ + + D+ + + I+ ++ + ++ S+ +
Sbjct: 3162 LRADKSQLENAYNQLIQNVDTNGKKPASIQQYQAARQAIETQYNNAKSEAHQILENSNPS 3221
Query: 253 FVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMR 312
+ + + + + K ++ + + + + ++
Sbjct: 3222 VNEVAQALQKVEAVQLKVNDAIHILQNKENNSALVTAKNQLQQSVNDQPLTTGMTQDSIN 3281
Query: 313 SSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDA 372
+ + E + + IN + ++D K + ++ +N+ A ++ + +
Sbjct: 3282 NYEAKRNEAQSAIRNAEAVINNGDATAKQISDEKSKVEQALAHLND--AKQQLTADTTEL 3339
Query: 373 QRAMHTFRDTSEKINRYIPSIG------NNLQNFSQSGLNDIQNLVRKLQETVNHFDDC 425
Q A+ + N+ SI +L+ S ++ +++K TV ++
Sbjct: 3340 QTAVQQLNRRGDTNNKKPRSINAYNKAIQSLETQITSAKDNANAVIQKPIRTVQEVNNA 3398
>gi|224145901|ref|XP_002325804.1| predicted protein [Populus trichocarpa]
gi|222862679|gb|EEF00186.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 36.4 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 27/309 (8%), Positives = 91/309 (29%), Gaps = 8/309 (2%)
Query: 151 AENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHS 210
+ + + + +E +++ + N + ++ + + + +K++ +
Sbjct: 188 VKEEALFMEKKVESLMSELETVKEEKAQALNNEKLAASSVQSLLEEKNKIVTELENARDE 247
Query: 211 SDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRET 270
+++ L + + T
Sbjct: 248 EAKSKKAMESLASALHEVSAEAREAKERLVSNLVEHENYETQIEDLRLVLKATNEKYETV 307
Query: 271 TQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIIS 330
+ + + + + ++ K+ + + S +S I + + +
Sbjct: 308 LDDAKHEIELLKKTVEESKNEFKNSKAMWDQKEENLVNSVRKSEEENISLEKEIDRLVNL 367
Query: 331 TINTIENITSNLNDSSQKFAELMS-KINNISALKENNSLFKDAQRAMHTFRDTSEKINRY 389
T E ++ + L + IS + ++ + + ++
Sbjct: 368 QKQTEEEACGMRDEEAHLKDSLKEVEAEVISLQEALGEAKVESMKLKESLLAKENELQNI 427
Query: 390 IPSIGNNLQNFSQSG--LNDIQNLVRKLQETVNHFDDC-LNNFERN----PQDIVWGREK 442
I + S + ++ L+ + + ++ L + E++ P+ I + E
Sbjct: 428 ILENKELRTKEASSLKKVEELSKLLEEAMAKIQTVENAELTDSEKDYDLLPKMIEFSEEN 487
Query: 443 GSVKIYKPK 451
G V+ KPK
Sbjct: 488 GHVREEKPK 496
>gi|192291136|ref|YP_001991741.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris TIE-1]
gi|192284885|gb|ACF01266.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas
palustris TIE-1]
Length = 561
Score = 36.4 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 23/213 (10%), Positives = 56/213 (26%), Gaps = 8/213 (3%)
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ ++Q V E + S + H+ Q E ++ +
Sbjct: 336 QASANVQSVASATEEMASSVTEISRQVQDSARIAHEAVTQAQRTNERVGELSQAATRIGD 395
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
++ T A N+ + + ++ + E + SQ
Sbjct: 396 VVELINTIAGQTNLLALNATIEAARAGEAGRGFAVVAAEVKALA-EQTAKATGEISQHIG 454
Query: 351 ELMSKI-NNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN--- 406
+ + +++A++E S T E+ I N+Q +
Sbjct: 455 GIQAATHESVNAIREIGSTISKMSEIASTIASAVEEQGAATQEISRNVQQAAMGTQQVSA 514
Query: 407 ---DIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
D+Q + + + +
Sbjct: 515 SVVDVQRGANETGSASTQVLSAAQSLANDSNRL 547
>gi|146338237|ref|YP_001203285.1| putative methyl-accepting chemotaxis protein [Bradyrhizobium sp.
ORS278]
gi|146191043|emb|CAL75048.1| Putative methyl-accepting chemotaxis protein [Bradyrhizobium sp.
ORS278]
Length = 476
Score = 36.4 bits (81), Expect = 8.7, Method: Composition-based stats.
Identities = 16/102 (15%), Positives = 37/102 (36%), Gaps = 5/102 (4%)
Query: 336 ENITSNLNDSSQKFAELMSKINNISALKENNSL-FKDAQRAMHTFRDTSEKINRYIPSIG 394
+ I + + A++ + ++ S F Q T N I +
Sbjct: 23 DEIADRIGGLGVELADVAGNVQEVANRVSYQSQRFGHLQATAKTMVAA----NHDIATAS 78
Query: 395 NNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+Q+ + + + DI ++ V H + +++ ER Q +
Sbjct: 79 QAVQSATTAAVGDIAQSRNVVETAVRHISELVDSVERIEQRL 120
>gi|301604844|ref|XP_002932053.1| PREDICTED: pericentrin-like [Xenopus (Silurana) tropicalis]
Length = 2404
Score = 36.4 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 17/314 (5%), Positives = 92/314 (29%), Gaps = 11/314 (3%)
Query: 145 NYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTT 204
+ E K+ + + + ++ + + + + +
Sbjct: 1601 HQLRRQVELLEYKLQQEASIVADLNASLSREKERASEQHKLLLVEQGSVNQLRTQQEEWQ 1660
Query: 205 QVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTV 264
++ + + + ++ + ++ S + +
Sbjct: 1661 LEQEKLVKTQKELQMDISTLREQLESKAQALSVYIEKLHTHQELESKRLEEEKILQQQSQ 1720
Query: 265 HDVRETTQTFQEVGQKIDHLLSDFSSK--MKSKETSAFLENIADSTSNMRSSISAIREIT 322
+T Q + +++ ++ S+ + S +++ S + ++ +
Sbjct: 1721 EHYEKTLQELSKSLEELQVQNNNLSAALQHEQTCCSNIKKDLQIEQSRFEALLALEQNKL 1780
Query: 323 DQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD------AQRAM 376
+ Q+ ++ S+ + + + + ++ +++ ++ + +
Sbjct: 1781 SETQQELAKERQQSQKLSSTLTLERNMLDQLRQQHSTELSRKDQEKLQEHNTVLTLKSQL 1840
Query: 377 HTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK---LQETVNHFDDCLNNFERNP 433
R ++ + + + + ++Q + ++ET L++ +
Sbjct: 1841 EEERSRAKDLAAMMEKTQQQAIHAKRQLEAEVQASREETQNVRETSIKLRAMLDSLQSQK 1900
Query: 434 QDIVWGREKGSVKI 447
Q + E ++
Sbjct: 1901 QQLDNTLEHLRIRE 1914
>gi|225573504|ref|ZP_03782259.1| hypothetical protein RUMHYD_01697 [Blautia hydrogenotrophica DSM
10507]
gi|225039153|gb|EEG49399.1| hypothetical protein RUMHYD_01697 [Blautia hydrogenotrophica DSM
10507]
Length = 728
Score = 36.4 bits (81), Expect = 8.8, Method: Composition-based stats.
Identities = 49/455 (10%), Positives = 137/455 (30%), Gaps = 50/455 (10%)
Query: 27 WLSRSNQYD--GPMAEVIIRIPGSVDG-------------------LSTDSSV--RF--- 60
W + + +D G + + + + G L + + +F
Sbjct: 37 WFNIAANWDPYGNTEGLTVAVANADAGYDSNIVQLNLNLGEQIVHSLKENDQIGWKFTSV 96
Query: 61 ----NGIPVGR-IVGLFLDQEYPNHSLAKALIRPD-----TPLYPSTTATIRTQGLAGIT 110
NG+ G+ + + +++ L+ + + A G
Sbjct: 97 KNAKNGVKSGKYYAAIVIPEDFSQKLLSVFTKDANNAKLEYYINEKENAIAPKITDKGAD 156
Query: 111 YIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIE 170
++ +T+ + A+ + F+S ++ + +Q +
Sbjct: 157 AVQQQINETFTQTVAKAASGALEILTENLDGETSKEFLSKLTDSLDTAAGDLETLQSTVT 216
Query: 171 NIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKM 230
T + + + T L ++ + ++ + ++D ++S+ +
Sbjct: 217 AFSHMAGTLDSLLVSAQTTLPTIGQVSEEGKAALENASFLDSAQASMELVSDTLSSVAEQ 276
Query: 231 IKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSS 290
+ + + ++ +++ + D++ T+ E + L + +
Sbjct: 277 SGHFSDSVLTAVNTALDTIDSDSSLAAEHFSDISEDIQADTEKLAEYQTALRQLKVELEA 336
Query: 291 KMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFA 350
+TS IA + S + +TD ++ +L Q
Sbjct: 337 LPLPPDTSLIDSMIAKLQQAIDRENSLSQRLTDLSTSVLDGAEISSQTRKDLQALIQNTN 396
Query: 351 ELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFS------QSG 404
+S + +N++ + + S+ ++ + G N S S
Sbjct: 397 SDLSDV----KEDYHNTIQPQLDELSTSIQTASDNLSSILNRTGENFTQLSDLLVNADSS 452
Query: 405 LNDIQNLVRK----LQETVNHFDDCLNNFERNPQD 435
L+D Q + + L T ++ L +R +
Sbjct: 453 LSDAQAALEQTGSLLSHTQEQIENTLTKLQRAQNE 487
>gi|221115489|ref|XP_002157234.1| PREDICTED: similar to kinesin family member 21A, partial [Hydra
magnipapillata]
Length = 1736
Score = 36.4 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 58/167 (34%), Gaps = 3/167 (1%)
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
+ S + ++ +D+ + S+ + + + + I + + L S
Sbjct: 490 DEEDSHNEEEDDDIASNTDSDNEDALNQSLKNEEAMQNNINDLDTDITIKQKLIDELEHS 549
Query: 346 SQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGL 405
Q+ L + + + K+ + + +++ S + ++ + L
Sbjct: 550 QQRLTALKQQYEQ--KMILLQNKIKETESERDKVLKSIGNVDQLARSKSDEVRKQYEKKL 607
Query: 406 NDIQNLVRKLQETVNHFDDCLNNFERNPQDI-VWGREKGSVKIYKPK 451
+Q + KLQ + L E+N Q + + E +K K K
Sbjct: 608 IAMQKELSKLQNSKREHQRLLKAKEQNEQQLKLMRDELNDMKRTKVK 654
>gi|91228649|ref|ZP_01262565.1| putative methyl-accepting chemotaxis protein [Vibrio alginolyticus
12G01]
gi|91187800|gb|EAS74116.1| putative methyl-accepting chemotaxis protein [Vibrio alginolyticus
12G01]
Length = 386
Score = 36.4 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 23/259 (8%), Positives = 77/259 (29%), Gaps = 22/259 (8%)
Query: 178 TTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQ 237
+ I + ++ + + + + + +
Sbjct: 50 GVYYIMTFIGGAMFTMNKALNTLAGGDLTARMNFFPVRDEFSEIAITIDKVAEREQQMVL 109
Query: 238 KVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKET 297
+ + + +Q S++ +S + +E + +++ + + ++ T
Sbjct: 110 SIQESVALMQQISSDLNQSIHHSSDISATQQEHLNSLASATEQMASTIREVATLAHDSST 169
Query: 298 SAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKIN 357
D+ + +S + + + I + + L+ ++ + E+++ IN
Sbjct: 170 Q-----TDDARNVAQSGQVKVENTLHSISNLSNEIQSASQAVAELDANAAQIDEVVTTIN 224
Query: 358 NISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQE 417
IS +L + A G ++++ L + Q+
Sbjct: 225 GISEQTNLLALNAAIEAA-------------RAGEQGRGFA----VVADEVRALAGRTQQ 267
Query: 418 TVNHFDDCLNNFERNPQDI 436
+ + +RN Q +
Sbjct: 268 ATVEIQTMIESLQRNSQSL 286
>gi|1777305|dbj|BAA19070.1| myosin heavy chain [Theragra chalcogramma]
Length = 1119
Score = 36.4 bits (81), Expect = 9.0, Method: Composition-based stats.
Identities = 22/189 (11%), Positives = 68/189 (35%), Gaps = 10/189 (5%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + + +D +F + + E A+ ++
Sbjct: 597 SLEKTKQRLQGEVEDLMVDVERANGLAANLDKKQRNFDKV-LADWKQKYEEGQAELEGSL 655
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S E+ + T++ +E + + Q+ ++L +I E +
Sbjct: 656 KEARSLSTELFKMKNSYKETLDHLETMKRENKNLQQEISDLTEQI------GETGKSIHE 709
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNN 428
+++ +I + L++ L ++ + ++ + D+ +
Sbjct: 710 LEKSKKQVETEKTEIQSALEEAEGTLEHEESKILRVQLELNQIKGEVDRKLAEKDEEMEQ 769
Query: 429 FERNPQDIV 437
+RN Q ++
Sbjct: 770 IKRNSQRVI 778
>gi|291296472|ref|YP_003507870.1| DNA repair protein RecN [Meiothermus ruber DSM 1279]
gi|290471431|gb|ADD28850.1| DNA repair protein RecN [Meiothermus ruber DSM 1279]
Length = 523
Score = 36.4 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 16/157 (10%), Positives = 41/157 (26%), Gaps = 2/157 (1%)
Query: 282 DHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSN 341
+ +N ++ + +R++ + +
Sbjct: 117 RKAQRKLLDSQVKPDLLVRYQNAYGQYQSILRETERLEAAARERERRLDILRFQIAEIDQ 176
Query: 342 LNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSE--KINRYIPSIGNNLQN 399
+ +L + + L+ A A+ D +
Sbjct: 177 ARLVVGEEEQLKQEAERLRHLEALRERVSAAISALGGEGDALGLVTLASREVKAAGRFDA 236
Query: 400 FSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDI 436
+S D++ + L+ +D L N E +PQ +
Sbjct: 237 HLESLSRDLEAALDALRAVSRELEDYLENLEADPQRL 273
>gi|83593889|ref|YP_427641.1| methyl-accepting chemotaxis sensory transducer [Rhodospirillum
rubrum ATCC 11170]
gi|83576803|gb|ABC23354.1| methyl-accepting chemotaxis sensory transducer [Rhodospirillum
rubrum ATCC 11170]
Length = 644
Score = 36.4 bits (81), Expect = 9.2, Method: Composition-based stats.
Identities = 39/352 (11%), Positives = 105/352 (29%), Gaps = 15/352 (4%)
Query: 98 TATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKK 157
A I IT + + K + +R I A + F N++ +
Sbjct: 290 IAAISRSITRPITAMTGAMGDLAKGNLDVAVPALERRDEIGAMAKAVEVFKRNSQERQRL 349
Query: 158 ISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTF 217
+ K +T TI T++A + ++++ + +++
Sbjct: 350 EEREKADAARAEARQRKIADSTRRFDATILTMIAKIKAAVEQLHSASNALSANAEETGRQ 409
Query: 218 NTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQT---F 274
+ + T+ ++ +I S+ +++ ++ E T
Sbjct: 410 SGAVAIATANATANVETVASAGAELAASIDEISSQVQQTAAITRAATDEMAEATHKIGGL 469
Query: 275 QEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN---------MRSSISAIREITDQR 325
E QKI ++ ++ A I + + +
Sbjct: 470 SEAAQKIGDVVGVINALASQTNMLALNATIESARAGEAGKGFAVVANEVKVLAGQTARAT 529
Query: 326 QKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDTSEK 385
+ I S I ++ S + M++IN +A ++ A ++
Sbjct: 530 RDIASHIAAVQGEAGAAVSSIALISGTMTRINEFTAA--IAGAVEEQGAATAEIARNVDQ 587
Query: 386 INRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
++ + N+ + ++ + + + ++ + ER + +
Sbjct: 588 ASQGTREVAINVAGVA-EAASETGRMAQGVFQSADDLQSESATLEREVERFL 638
>gi|331220085|ref|XP_003322718.1| hypothetical protein PGTG_04255 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309301708|gb|EFP78299.1| hypothetical protein PGTG_04255 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 3279
Score = 36.4 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 35/354 (9%), Positives = 92/354 (25%), Gaps = 11/354 (3%)
Query: 88 RPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYF 147
P L + TA +++ + E +
Sbjct: 1959 DPQPALQEAQTAPQQSESAPREAEPVPQESEPAPQEPESAPQEPKSTPQDSQPAPQEAET 2018
Query: 148 ISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVT 207
++ + ++ + +P S + +
Sbjct: 2019 APQPSESAPREAEPFPQESEPAPQEPEPAPQEPETAPQESEPAPQETESALQESESAPQE 2078
Query: 208 PHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDV 267
P S + + + + Q E+ +N ++S+
Sbjct: 2079 PESVPQEAESAPQDPQPALQESETAPQESEPAPQESESAPQEANPVPQASEPAPQEPEST 2138
Query: 268 RETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQK 327
+Q + + H + S+ +E + + + S+ + + +
Sbjct: 2139 PHDSQPAPQEAETAPHQPAPQESETAPQEPQSAPPDTQPAPQEAESAPQDSQPAPQEAEA 2198
Query: 328 IISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKDAQRAMHTFRDT----- 382
+ S+ + SA +E S +D+Q A+ F
Sbjct: 2199 APQESEPAPQEAEPVPQESESAPQEPE-----SAPQEAKSAPQDSQPALQEFETAPQESE 2253
Query: 383 -SEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQD 435
+ + + P ++ S+S + ++ ++ + L FE PQ+
Sbjct: 2254 PAPQESESAPQEAESVPQESESAPQEPESAPQEAESAPQDPQPALQEFETAPQE 2307
>gi|148927452|gb|ABR19832.1| 10C light meromyosin [Ctenopharyngodon idella]
Length = 562
Score = 36.4 bits (81), Expect = 9.3, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 68/189 (35%), Gaps = 10/189 (5%)
Query: 252 NFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSNM 311
+ K+ ++ V D+ + + +D +F ++ + E A+
Sbjct: 42 SLEKTKQRLQAEVEDLMIDVERANGLAANLDKKQKNFDKV-LAEWKQKYEEGQAELEGAQ 100
Query: 312 RSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFKD 371
+ + S E+ + +++ +E + + Q+ +EL ++ E +
Sbjct: 101 KEARSLSTELFKMKNSYEESLDQLETLKRENKNLQQEISELTEQL------SETGKGIHE 154
Query: 372 AQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLN---DIQNLVRKLQETVNHFDDCLNN 428
++A T +I + L++ L ++ + ++ + D+ +
Sbjct: 155 LEKAKKTVETEKAEIQTALEEAEGTLEHEESKILRVQLELNQVKSEIDRKLAEKDEEMEQ 214
Query: 429 FERNPQDIV 437
+RN Q ++
Sbjct: 215 IKRNSQRVI 223
>gi|332174977|gb|AEE24231.1| Mannan endo-1,4-beta-mannosidase [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 1063
Score = 36.4 bits (81), Expect = 9.4, Method: Composition-based stats.
Identities = 36/445 (8%), Positives = 96/445 (21%), Gaps = 24/445 (5%)
Query: 1 MESKNYYT---SVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSS 57
M +++ +G+ V L + S Y + + P ++ +
Sbjct: 1 MFNQSNSFSRCVLGVSVALGLSGCLGGESLNTESATYVPESRPLDVIAPADIE-VKPGDD 59
Query: 58 VRFNGIPVG----------RIVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLA 107
V +G VG +I G + P+ + + + + A
Sbjct: 60 VTISGRLVGTTDGQTVVWSQISGTAVSITDPSAATLTFSVPDS--IRSDKLVFQISAINA 117
Query: 108 GITYIELSTLRKEKKTIFQIATERNQRAMITATPSGINYFISNAENTSKKISDSSRHIQK 167
+ + + + + + + + +
Sbjct: 118 DGSAATNEDGEAIIDIVEITVFDPDSVITLDVSADSATLNGATLVVEGDDMFVAGAMSDT 177
Query: 168 IIENIEKPLTTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLI--T 225
+IE ++ T + + N I + + F
Sbjct: 178 HTADIEPGMSVTFNIDDQVGFYTLNVRYLIPTDYGGKMASAIVNGVTYDFEFSATGQWEE 237
Query: 226 SLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLL 285
++K D + ++ + + T + L+
Sbjct: 238 LRVGVVKLTDGENTIEVGGGWNYYRIDGISLIPAAAPAEPLPVAPTLVNANASDEALALM 297
Query: 286 SDFSSKMKSKETSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDS 345
S S S E + + + N +++ +
Sbjct: 298 SLLSENYAKATLSGQTEFPRKVDDDFPLTETNKIIQATGDDAPAIVAFDYMNYSASYAGA 357
Query: 346 SQKFAELMSKINNISALKENN-SLFKDAQRAMHTFRDTSEKI--NRYIPSIGNNLQNFSQ 402
L + + S + + + L +
Sbjct: 358 DGSAEGLTEAMIAAHKNQNAILSALFHWRAPSGNAGTGDGSFYTDSTTFNFAAALAD--- 414
Query: 403 SGLNDIQNLVRKLQETVNHFDDCLN 427
G D L+ + +
Sbjct: 415 PGGADYAALLEDIDTVATELKKLAD 439
>gi|313900735|ref|ZP_07834228.1| efflux ABC transporter, permease protein [Clostridium sp. HGF2]
gi|312954797|gb|EFR36472.1| efflux ABC transporter, permease protein [Clostridium sp. HGF2]
Length = 1082
Score = 36.4 bits (81), Expect = 9.5, Method: Composition-based stats.
Identities = 34/410 (8%), Positives = 102/410 (24%), Gaps = 17/410 (4%)
Query: 12 LFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNGIPVG-RIVG 70
+F + + +FF+ S + L S +G
Sbjct: 24 IFAIVGIGVAFFAGVRDSVPVMKNTADTYFDDYNFMD---LKIMS-------TIGMTKED 73
Query: 71 LFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEKKTIFQIATE 130
+ ++ + D + + + + + +
Sbjct: 74 VSAIRQVDGVAGVYGSYSMDVLNTHNNQQRVYKLLSYPMNAKAEDENYINQMRLIKGRLP 133
Query: 131 RNQRAMITATPSGINYFISNAENTSKKISDSSRHIQKIIENIEKPLTTTIANIETISTVL 190
R + + E + + + + K +
Sbjct: 134 RKADECVIEYTNIKGADSRIGEMITFASGTDEKLDASLKRSTYKIVGEVTMPYYLSYEKG 193
Query: 191 ANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSS 250
++ I + + S T +T ++ I
Sbjct: 194 SSAIGSGSIDNYAVIPDTNFKSSYYTEVYVTVDGAKKPNSYADAYFDIIDPKKTTITALG 253
Query: 251 NNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKETSAFLENIADSTSN 310
+ I + + K + ++K K + L + +
Sbjct: 254 EERAQERFDDIKKEALAKVEAGRKEYEKNKKKYETEIKNAKDKLENAKDELLVGQATLN- 312
Query: 311 MRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNISALKENNSLFK 370
SA R I ++ ++ + T+ + S + + K+++ L +
Sbjct: 313 -AEKSSAERTIQEKEAQLQQSEQTLSQLKSQYSSAKSYLDAQQKKLDD--NLPQIQKQIA 369
Query: 371 DAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVN 420
+A+ + + + K++ + NL + L + + + ++ +
Sbjct: 370 EAKAKLSSLDEELAKVDTQLQD--PNLTELEKQLLQEKKAALETSRQVAS 417
>gi|254825059|ref|ZP_05230060.1| transmembrane protein [Listeria monocytogenes FSL J1-194]
gi|293594301|gb|EFG02062.1| transmembrane protein [Listeria monocytogenes FSL J1-194]
Length = 927
Score = 36.4 bits (81), Expect = 9.8, Method: Composition-based stats.
Identities = 39/418 (9%), Positives = 124/418 (29%), Gaps = 30/418 (7%)
Query: 6 YYTSVGLFVVSILFFSFFSIYWLSRSNQYDGPMAEVIIRIPGSVDGLSTDSSVRFNG--I 63
+ FVV + ++ ++L G ++ + + + V +NG +
Sbjct: 14 NKILLLSFVVILFIPLLYASFFLKSVWDPYGKTGDLPVAVVNNDK------PVDYNGQTM 67
Query: 64 PVGR--IVGLFLDQEYPNHSLAKALIRPDTPLYPSTTATIRTQGLAGITYIELSTLRKEK 121
VG + L ++ + + QGL Y + T+ K+
Sbjct: 68 DVGDQLVTKLKSNK----------ELDWNFLSKEDAE-----QGLKDGKYYMIVTIPKDF 112
Query: 122 KTIFQIATERNQRAMITATPSGINYFI-SNAENTSKKISDSSRHIQKIIENIEKPLTTTI 180
+++ + M + + + + S ++ ++ + + I
Sbjct: 113 SKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEVTKSYAEAIFDKI 172
Query: 181 ANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVN 240
A+ I + +Q + + + L + L+
Sbjct: 173 KESGEGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFKDGANTLEVGLKTYT 232
Query: 241 QILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSK--ETS 298
+ + + V +++ K+ +S ++S + + +
Sbjct: 233 DGVNTAAAGGDKLNDGVSTLAAGVGPLKDGVAALDGGATKLASGVSTYTSGVDTLAGGIN 292
Query: 299 AFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKINN 358
+ + ++ + ++ + ++ +L D S K + + +++
Sbjct: 293 QAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLDSLVDGSNKLSAGLKELDG 352
Query: 359 ISALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQ 416
L + ++ M+ + +++N+ + L + + +L L
Sbjct: 353 --NLTDKQGKIAQLKQGMNDLQQGIDQLNKSVNGEDAALAKQLAALQKSLSDLQNGLT 408
>gi|328871404|gb|EGG19774.1| hypothetical protein DFA_06874 [Dictyostelium fasciculatum]
Length = 1893
Score = 36.4 bits (81), Expect = 9.9, Method: Composition-based stats.
Identities = 21/237 (8%), Positives = 74/237 (31%), Gaps = 3/237 (1%)
Query: 204 TQVTPHSSDSKNTFNTITDLITSLDKMIKAIDLQKVNQILENIQVSSNNFVKSSDQVINT 263
+ +N + + ++ + NQ+ + I+V + +
Sbjct: 325 LNFEKEMLNHQNVGQELNQELNEKIDGLEQKMAEYKNQLEKKIEVCQSLQEQLDAGKKEI 384
Query: 264 VHDVRETTQTFQEVGQKIDHLLSDFSSKMKS--KETSAFLENIADSTSNMRSSISAIREI 321
E + T + ++D + +S + F + + +E+
Sbjct: 385 QALQEEMSVTSNKYNDQLDSQEMEMRELRESIGQWKLKFENVEVVAKERKERIETVEKEL 444
Query: 322 TDQRQKIISTINTIENITSNLNDSSQKFAELMSKINNI-SALKENNSLFKDAQRAMHTFR 380
+ ++++ + + L S +K L ++ + + S ++ ++ +
Sbjct: 445 ETVQDELVTVVERHRDGVEQLAKSVEKIDLLNKQLEAVKVQRGQVGSDLEEMKKRVDDTL 504
Query: 381 DTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRKLQETVNHFDDCLNNFERNPQDIV 437
+ + + + + Q K+++ + N +R+ Q ++
Sbjct: 505 EQLDVSQKECQELRDAKTEVELVAEEKYQETTAKMRKELQEISVRANEMDRDNQQLL 561
>gi|322697547|gb|EFY89326.1| spindle-pole body protein (Pcp1), putative [Metarhizium acridum
CQMa 102]
Length = 1300
Score = 36.4 bits (81), Expect = 10.0, Method: Composition-based stats.
Identities = 28/272 (10%), Positives = 78/272 (28%), Gaps = 13/272 (4%)
Query: 177 TTTIANIETISTVLANNISHIDKMMHTTQVTPHSSDSKNTFNTITDLITSLDKMIKAIDL 236
+E + + I ++ + D + + + A
Sbjct: 365 ENQNEELEEARETIQDLELTIRRLEEQVEDFKEKVDQAISQKDRAESDLEELQEEMANKS 424
Query: 237 QKVNQILENIQVSSNNFVKSSDQVINTVHDVRETTQTFQEVGQKIDHLLSDFSSKMKSKE 296
+ ++ + + D+ D+ + E +++ + + ++ +
Sbjct: 425 VVTKGLSRQVEEKVSRLQEELDKSGKEYADLEKELAGANEENEQLRAEVVELRNEQQEIR 484
Query: 297 TSAFLENIADSTSNMRSSISAIREITDQRQKIISTINTIENITSNLNDSSQKFAELMSKI 356
+N ++ E + + + E + N+ ++ EL +
Sbjct: 485 -RGQHDNSTKVRELEAELLAVADEKDLLQVRHETLRVESEALQRNVQQLEREVEELQKNV 543
Query: 357 NNIS--ALKENNSLFKDAQRAMHTFRDTSEKINRYIPSIGNNLQNFSQSGLNDIQNLVRK 414
++ A++ L + Q + D + + N N S+ N+ Q LV +
Sbjct: 544 SDEREYAVEIEKDLRQQYQDELERLNDAVSDLQAEVRERDNLYDNDSEKWENEKQALVSE 603
Query: 415 ----------LQETVNHFDDCLNNFERNPQDI 436
LQ T+ + N +
Sbjct: 604 RERAEEKAAGLQRTIERLREAEGNLSNKESTL 635
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.306 0.0859 0.188
Lambda K H
0.267 0.0264 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,280,366,032
Number of Sequences: 13984884
Number of extensions: 43052715
Number of successful extensions: 327435
Number of sequences better than 10.0: 5233
Number of HSP's better than 10.0 without gapping: 3569
Number of HSP's successfully gapped in prelim test: 1664
Number of HSP's that attempted gapping in prelim test: 319126
Number of HSP's gapped (non-prelim): 8485
length of query: 452
length of database: 4,792,584,752
effective HSP length: 142
effective length of query: 310
effective length of database: 2,806,731,224
effective search space: 870086679440
effective search space used: 870086679440
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (36.4 bits)