HHsearch alignment for GI: 254780141 and conserved domain: COG3009
>COG3009 Uncharacterized protein conserved in bacteria [Function unknown].
Probab=99.96 E-value=8.8e-28 Score=175.86 Aligned_cols=181 Identities=15% Similarity=0.223 Sum_probs=154.8
Q ss_pred HHHHHHHHHHCCCCCCCCCEEEECCCCCCCC-CCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHH
Q ss_conf 9999999863048899986079707888766-666666208981530120006863789946976998146601256899
Q gi|254780141|r 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYD-ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96 (208)
Q Consensus 18 l~~~~~~~l~~c~~~~~p~~~Y~L~~~~~~~-~~~~~~~~i~v~~~~~~~~l~~~~Iv~~~~~~~~~~~~~~rW~~~p~~ 96 (208)
T Consensus 5 l~~~aal~L~~Cas~~p~~~~yqLp~~~~~~~~a~~g~r~l~v~~V~ladyL~~~giVyrtsd~q~~~a~nn~WA~pLd~ 84 (190)
T COG3009 5 LMIIAALLLAGCASGEPSKQYYQLPVAASAPVPASQGGRLLWVEPVRLADYLKRNGIVYRTSDVQLVIANNNRWASPLDQ 84 (190)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCEEEEEEECHHHHHCCCCEEEECCCHHEEEHHHCCCCCCHHH
T ss_conf 99999999875379998832897446556776502365438985100554424786599707740021310310140308
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCCC-CCCEEEEEEEEEEEEECCCCEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCC
Q ss_conf 99999999997316940650376777-88359999999999635874799999999994578827789999999952779
Q gi|254780141|r 97 MIQLKLIANFENNGKISTVVKPNQGI-YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175 (208)
Q Consensus 97 ~l~~~L~~~L~~~~~~~~v~~~~~~~-~~~~~L~~~I~~f~~~~~~~~a~i~~~~~l~~~~~~~~~~~~~f~~~~~~~~~ 175 (208)
T Consensus 85 qL~q~L~~~ls~~l~~~~va~~p~~s~q~~~~l~vtv~rF~gry~g-~a~i~g~W~L~~-~~G~~~~~r~F~~e~eq~~~ 162 (190)
T COG3009 85 QLRQALSANLSRLLSGWVVAPAPASSGQDLYKLNVTVQRFDGRYTG-KAVISGEWRLLH-DKGQPLINRPFHLELEQQGD 162 (190)
T ss_pred HHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEEEEEEECCCCCC-CEEEEEEEEEEC-CCCCCCCCCCEEEEECCCCC
T ss_conf 9999999988765466466136688886307999999621573468-548999999745-66672115740366423478
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9889999999999999999999999
Q gi|254780141|r 176 NKLHFIQSLNRAFSRISSEIIDWTL 200 (208)
Q Consensus 176 ~~~~~v~Al~~Al~~l~~~ia~w~~ 200 (208)
T Consensus 163 gyda~V~als~~~~Q~a~qia~~vk 187 (190)
T COG3009 163 GYDAMVRALSGGLKQLAAQIAEQVK 187 (190)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 7889999999999999999998620