HHsearch alignment for GI: 254780141 and conserved domain: COG5468
>COG5468 Predicted secreted (periplasmic) protein [Function unknown].
Probab=95.86 E-value=0.12 Score=28.32 Aligned_cols=95 Identities=16% Similarity=0.208 Sum_probs=62.5
Q ss_pred CHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEEEEEEE-----C------C---CCEEEEEEEEEEEECCCC
Q ss_conf 6899999999999973169406503767778835999999999963-----5------8---747999999999945788
Q gi|254780141|r 93 KLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEIN-----I------D---RHCAIITMSLKIINAHDN 158 (208)
Q Consensus 93 ~p~~~l~~~L~~~L~~~~~~~~v~~~~~~~~~~~~L~~~I~~f~~~-----~------~---~~~a~i~~~~~l~~~~~~ 158 (208)
T Consensus 48 r~gqevRnqLifl~s~g--------aGePA~p~y~Lsl~vs~~a~~~~~~nv~~~~d~d~p~ag~v~mt~~y~Ltdak~G 119 (172)
T COG5468 48 RGGQEVRNQLIFLFSGG--------AGEPANPQYYLSLSVSRFARGVRLVNVGNDTDRDRPSAGRVVMTADYVLTDAKDG 119 (172)
T ss_pred HHHHHHHHHHHHHHCCC--------CCCCCCCCEEEEEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCC
T ss_conf 58899999999996168--------9998882168998743103457887405655578987757999865898754788
Q ss_pred CEEEEEEEEEEEEC--CCCCHHHH---HHHHHHHHHHHHHHH
Q ss_conf 27789999999952--77998899---999999999999999
Q gi|254780141|r 159 SLVGQKVFHVEEKL--EKDNKLHF---IQSLNRAFSRISSEI 195 (208)
Q Consensus 159 ~~~~~~~f~~~~~~--~~~~~~~~---v~Al~~Al~~l~~~i 195 (208)
T Consensus 120 ~~v~~Grr~vtas~D~p~QefA~irA~rDaenRAArElAe~i 161 (172)
T COG5468 120 AEVHKGRRSVTASFDRPRQEFAKIRAQRDAENRAARELAEII 161 (172)
T ss_pred CEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 776524315788734751478888887606778999999999