HHsearch alignment of GI: 254780141 and MMDB domain: 2iqi_A_
>2iqi_A (A:) Hypothetical protein XCC0632; structural genomics, PSI-2, protein structure initiative; 2.70A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.4e-38 Score=236.50 Aligned_cols=178 Identities=26% Similarity=0.455 Sum_probs=165.6
Q ss_pred HHHCCCCCCCCCEEEECCCCCC-CCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHH
Q ss_conf 8630488999860797078887-666666662089815301200068637899469769981466012568999999999
Q gi|254780141|r 25 SLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103 (208)
Q Consensus 25 ~l~~c~~~~~p~~~Y~L~~~~~-~~~~~~~~~~i~v~~~~~~~~l~~~~Iv~~~~~~~~~~~~~~rW~~~p~~~l~~~L~ 103 (208)
.|+||++++ ++||.|+++.. .......++.|.|.+|.++++|++++|+|+.++++++++.+|||+++|++||++.|.
T Consensus 1 ~LsGCss~p--~~~Y~L~~~~~~~~~~~~~~~~i~v~~v~~~~~l~~~~iv~~~~~~~~~~~~~~rWa~~~~~~l~~~L~ 78 (192)
T 2iqi_A 1 SLSLGDQKP--ATIYAPTVRVTPNPAWPQVSWQLLVAKPSAARIIDSPRINVRPTPGELQVYHGAGWAQPATDMLEDSVV 78 (192)
T ss_dssp -----------CEEECCCCCCCCCTTSCCCCSEEEECCCBCCTTTSSSSCEEESSTTCCEECTTEEESSCHHHHHHHHHH
T ss_pred CCCCCCCCC--CCEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHCCCCEEEEECCCEEEECCCCCHHCCHHHHHHHHHH
T ss_conf 967889999--557864788888988898753699876334001067877998389889773678110387899999999
Q ss_pred HHHHHHCCCEEEECCCCCCCCCEEEEEEEEEEEEECCCC---EEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHH
Q ss_conf 999731694065037677788359999999999635874---79999999999457882778999999995277998899
Q gi|254780141|r 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180 (208)
Q Consensus 104 ~~L~~~~~~~~v~~~~~~~~~~~~L~~~I~~f~~~~~~~---~a~i~~~~~l~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 180 (208)
++|++.+.+..|++++++..+||+|+++|++|+++++++ ++++.++|.+++.+++++++++.|+.++|+.++++.++
T Consensus 79 ~~L~~~~~~~~v~~~~~~~~~d~~L~~~i~~f~~~~~~~~~~~~~l~~~~~l~~~~~~~~i~~~~f~~~~~~~~~~~~~~ 158 (192)
T 2iqi_A 79 RAFEDSGKIAAVARIGAGIRSDYKLAIDVRRFESDYAGQSLPAATIELNAKLLHSSDQRVVASRTFTVARPSSSTDTAAV 158 (192)
T ss_dssp HHHHTTSSCSEEECC-----CCEEEEEEEEEEEEECTTSSSCEEEEEEEEEEEETTTTEEEEEEEEEEEEECSSSSHHHH
T ss_pred HHHHHHCCCCEEECCCCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCHHHH
T ss_conf 99996099736756888888887999999997877168885379999999997579983789988999977788998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 999999999999999999997397
Q gi|254780141|r 181 IQSLNRAFSRISSEIIDWTLSSLP 204 (208)
Q Consensus 181 v~Al~~Al~~l~~~ia~w~~~~~p 204 (208)
|+||++|+++++++|++|+.+.+|
T Consensus 159 v~A~~~al~~l~~~ia~~i~~~~~ 182 (192)
T 2iqi_A 159 AAAFEQALTQVTTELVGWTLITGQ 182 (192)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999999998655