BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780141|ref|YP_003064554.1| putative ABC transporter
protein [Candidatus Liberibacter asiaticus str. psy62]
(208 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
Results from round 1
>gi|254780141|ref|YP_003064554.1| putative ABC transporter protein [Candidatus Liberibacter asiaticus
str. psy62]
gi|254039818|gb|ACT56614.1| putative ABC transporter protein [Candidatus Liberibacter asiaticus
str. psy62]
Length = 208
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT
Sbjct: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ
Sbjct: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
Query: 121 GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF
Sbjct: 121 GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
Query: 181 IQSLNRAFSRISSEIIDWTLSSLPLSDN 208
IQSLNRAFSRISSEIIDWTLSSLPLSDN
Sbjct: 181 IQSLNRAFSRISSEIIDWTLSSLPLSDN 208
>gi|315122743|ref|YP_004063232.1| putative ABC transporter protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496145|gb|ADR52744.1| putative ABC transporter protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 202
Score = 275 bits (702), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 2/204 (0%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
MDKKL KI K + C A+ LC LSSCF N P NI+DLTESTK+++S+Q +++L I
Sbjct: 1 MDKKLKKITKNMRL-CIPAISLCMFLSSCF-GNIPKNIFDLTESTKHNQSIQHNVRLTIN 58
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
EP+T K L+S DIIVRSSP+EIQYLIGSQWSD+LPRM+QLKLIANFENNGKIST++KPNQ
Sbjct: 59 EPVTSKTLDSPDIIVRSSPVEIQYLIGSQWSDRLPRMVQLKLIANFENNGKISTIIKPNQ 118
Query: 121 GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
GIY +YQI S IR+FEI+I H AII +SLKII+ + +++ QKVFHVEE E+DNKL F
Sbjct: 119 GIYPNYQISSIIRAFEIDIHHHYAIIEISLKIIDINTGNIIAQKVFHVEEAFEEDNKLCF 178
Query: 181 IQSLNRAFSRISSEIIDWTLSSLP 204
I+SLNRAFSRISSEII+WT+SSLP
Sbjct: 179 IESLNRAFSRISSEIINWTVSSLP 202
>gi|302353422|gb|ADL27917.1| putative ABC transporter protein [Candidatus Liberibacter
asiaticus]
Length = 112
Score = 228 bits (580), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAH 156
MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAH
Sbjct: 1 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAH 60
Query: 157 DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPLSDN 208
DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPLSDN
Sbjct: 61 DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPLSDN 112
>gi|190892032|ref|YP_001978574.1| putative ABC transporter protein [Rhizobium etli CIAT 652]
gi|190697311|gb|ACE91396.1| putative ABC transporter protein [Rhizobium etli CIAT 652]
Length = 203
Score = 155 bits (391), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + +DL+ + D + Q+++ P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGAAAKN-DTFDLSGAVDGDGPAAKSRQILVAGPTALRAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPRM+Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDKLPRMVQSKLVEAFENSGKLGGVGLPGQGLAIDYQV 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S+KI+N + S+ QKVF DN F++SL+RA
Sbjct: 129 VTDIRSFEIDASSGNQAVVEISVKILNDRNGSVRAQKVFRATAPAGGDNA-GFVKSLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS + SEI+ WTL S+
Sbjct: 188 FSTVVSEIVSWTLRSI 203
>gi|327190643|gb|EGE57731.1| putative ABC transporter protein [Rhizobium etli CNPAF512]
Length = 203
Score = 155 bits (391), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + +DL+ + D + Q+++ P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAKN-DTFDLSGAVDGDGPAAKSRQILVAGPTALRAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPRM+Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDKLPRMVQSKLVEAFENSGKLGGVGLPGQGLAIDYQV 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S+KI+N + S+ QKVF DN F++SL+RA
Sbjct: 129 VTDIRSFEIDASSGNQAVVEISVKILNDRNGSVRAQKVFRATAPAGGDNA-GFVKSLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS + SEI+ WTL S+
Sbjct: 188 FSTVVSEIVSWTLRSI 203
>gi|86357961|ref|YP_469853.1| putative ABC transporter protein [Rhizobium etli CFN 42]
gi|86282063|gb|ABC91126.1| putative ABC transporter protein [Rhizobium etli CFN 42]
Length = 203
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ + + ++ YDL+ + D + Q++I P + L
Sbjct: 13 IRGTVIALPLTALILSGCGTAAKNDT----YDLSGAVDGDGPAAKSRQILIAGPTALRAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPR++Q KL+ FEN+GK+ V P QG+ DYQI
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDKLPRIVQSKLVEAFENSGKLGGVGMPGQGLAIDYQI 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + + A++ +S KI+N + S+ QKVF DN + F++ L+RA
Sbjct: 129 VTDIRSFEIDASNGNQAVVEISAKILNDRNGSVRAQKVFRAMAPAGGDN-VGFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
F+ + SEI+ WTL S+
Sbjct: 188 FAAVVSEIVSWTLRSI 203
>gi|241204912|ref|YP_002976008.1| hypothetical protein Rleg_2192 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858802|gb|ACS56469.1| protein of unknown function DUF330 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 203
Score = 153 bits (387), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL + + Q++I P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAKN-DTYDLPAAVDGSGPAAKSRQILIASPTALRSL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPR++Q KL+ FEN+GK+ V P QG+ DYQI
Sbjct: 69 DSEQIVIRVSPSEIQYLSKAQWGDKLPRIVQSKLVEAFENSGKLGGVGMPGQGLAIDYQI 128
Query: 129 ISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ R + A++ +S KI+N + S+ QKVF DN F++ L+RA
Sbjct: 129 VTDIRSFEIDASRGNQAVVEISAKILNDRNGSVRAQKVFRAMAPAGGDND-GFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS ++SEI+ WTL S+
Sbjct: 188 FSTVASEIVTWTLRSI 203
>gi|218461268|ref|ZP_03501359.1| putative ABC transporter protein [Rhizobium etli Kim 5]
Length = 203
Score = 152 bits (385), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ + + ++ YDL + D + Q++I P K L
Sbjct: 13 IRGTVIALPLTALILSGCGTAAKNDT----YDLAGAVDGDGPAAKTRQILIAGPTALKAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW D+LPR++Q KL+ FEN+GK+ V P QG+ DYQI
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDRLPRIVQSKLVEAFENSGKVGGVGMPGQGLAIDYQI 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + + A++ +S KI+N + ++ QKVF DN + F++ L+RA
Sbjct: 129 VTDIRSFEIDASNGNQAVVEISAKILNDRNGTVRAQKVFRAMAPAGGDN-VAFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
F+ + SEI++WTL S+
Sbjct: 188 FAAVVSEIVNWTLRSI 203
>gi|209549575|ref|YP_002281492.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535331|gb|ACI55266.1| putative ABC transporter protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 203
Score = 152 bits (384), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 117/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL+ + D + Q++I P +
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAKN-DTYDLSAAVDGDGPAAKSRQILIASPTALNAV 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
SE I++R SP EIQYL +QW DKLPRM+Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 GSEQIVIRVSPSEIQYLSRAQWGDKLPRMVQSKLVEAFENSGKLGGVGIPGQGLAIDYQV 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + + A++ +S KI+N + S+ QKVF DN F++ L+RA
Sbjct: 129 VTDIRSFEIDASNGNQAVVEISAKILNDRNGSVRAQKVFRAVAPAGGDNA-GFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS + SEI++WTL S+
Sbjct: 188 FSTVVSEIVNWTLRSI 203
>gi|116252404|ref|YP_768242.1| hypothetical protein RL2658 [Rhizobium leguminosarum bv. viciae
3841]
gi|115257052|emb|CAK08146.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 203
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ + + ++ YDL + + Q++I P + L
Sbjct: 13 IRGTVIALPLTALILSGCGTAAKNDT----YDLPAAVDGSGPAAKSRQILIASPTALRSL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPR++Q KL+ FEN+GK+ V P QG+ DYQI
Sbjct: 69 DSEQIVIRVSPSEIQYLSKAQWGDKLPRIVQSKLVEAFENSGKLGGVGMPGQGLAIDYQI 128
Query: 129 ISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S KI+N + S+ QKVF DN F++ L+RA
Sbjct: 129 VTDIRSFEIDASHGNQAVVEISAKILNDRNGSVRAQKVFRAMAPAGGDND-GFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS ++SEI+ WTL S+
Sbjct: 188 FSTVASEIVSWTLRSI 203
>gi|15888954|ref|NP_354635.1| hypothetical protein Atu1644 [Agrobacterium tumefaciens str. C58]
gi|15156733|gb|AAK87420.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 201
Score = 150 bits (379), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 117/188 (62%), Gaps = 3/188 (1%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKY--DESVQRHIQLIITEPITEKILNSEDIIV 75
LA L ++ C N + +DL+ S+ + QL+I +P K L+SE+I+V
Sbjct: 15 LAPLFAALMAGCAGAPNN-DTFDLSVSSAAVTQGPSLKSRQLLIADPTALKALDSENIVV 73
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
R S E+QYL SQWSD+LPRM+Q KL+ FE+ GK+ V +P QG+ DYQ++S IR+F
Sbjct: 74 RLSGSEVQYLGNSQWSDRLPRMVQSKLVEAFEDTGKLGGVGRPGQGLAIDYQVVSDIRAF 133
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
EI+ R+ A I +S+K++N + ++ Q+VF ++ +F+++L++AF+ + EI
Sbjct: 134 EIDTARNVANIEISVKLLNDRNGTVKAQEVFRASARVSGSGNANFVKALDQAFAAATREI 193
Query: 196 IDWTLSSL 203
+ WTL SL
Sbjct: 194 VAWTLKSL 201
>gi|222148410|ref|YP_002549367.1| hypothetical protein Avi_1896 [Agrobacterium vitis S4]
gi|221735398|gb|ACM36361.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 204
Score = 147 bits (372), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 121/192 (63%), Gaps = 7/192 (3%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKILNSED 72
+C+L++L L+ C +P + YDL + +S Q+ Q+++ +P K+L+S+
Sbjct: 17 ACALSIL-GVMLAGC--GTSPNDTYDLASIRAATTTQSAQKR-QVLVADPTALKVLDSDM 72
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
I+VR S E+QYL SQWSDKLPRM+Q KL+ FEN GK+ V KP QG+ DYQ++S I
Sbjct: 73 IVVRVSGTEMQYLAKSQWSDKLPRMVQSKLVEAFENTGKLGGVGKPGQGLAIDYQLLSDI 132
Query: 133 RSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
R+FE+ A + +S+K++N + S++ QKVF + + +L++AF+++
Sbjct: 133 RTFEVEAGGIRRANVEISVKLLNDRNGSVISQKVFSASVPARGGDNQALVNALSQAFAKV 192
Query: 192 SSEIIDWTLSSL 203
S +I++WTL+++
Sbjct: 193 SGDIVNWTLTTI 204
>gi|325293031|ref|YP_004278895.1| ABC transporter [Agrobacterium sp. H13-3]
gi|325060884|gb|ADY64575.1| putative ABC transporter protein [Agrobacterium sp. H13-3]
Length = 201
Score = 147 bits (371), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 64/148 (43%), Positives = 102/148 (68%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
QL+I +P K L+SE+I+VR S E+QYL SQWSD+LPRM+Q KL+ FE+ GK+ V
Sbjct: 54 QLLIADPTALKALDSENIVVRLSGSEVQYLGNSQWSDRLPRMVQSKLVQAFEDTGKLGGV 113
Query: 116 VKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175
+P QG+ DYQ++S IR+FEI+ ++ A I +S+K++N + ++ Q+VF ++
Sbjct: 114 GRPGQGLAIDYQVVSDIRTFEIDTAKNTADIEISVKLLNDRNGTVKAQEVFRASARVSGS 173
Query: 176 NKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+F+++L++AF+ + EI+ WTL SL
Sbjct: 174 GNANFVKALDQAFAAATREIVAWTLKSL 201
>gi|218670693|ref|ZP_03520364.1| putative ABC transporter protein [Rhizobium etli GR56]
Length = 203
Score = 147 bits (371), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 118/196 (60%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL + D + Q++I P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAKN-DTYDLAGTVDGDGPAAKSRQILIAGPTALRSL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPR++Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDKLPRIVQSKLVEAFENSGKLGGVGLPGQGLAIDYQV 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S+K++N + S+ QKVF DN + F+++L+ A
Sbjct: 129 VTDIRSFEIDASSGNQAVVEISVKLLNDRNGSVRAQKVFRAMAPAGGDN-VGFVKALDHA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS + SEI+ WTL S+
Sbjct: 188 FSIVVSEIVSWTLRSI 203
>gi|222086197|ref|YP_002544729.1| ABC transporter protein [Agrobacterium radiobacter K84]
gi|221723645|gb|ACM26801.1| ABC transporter protein [Agrobacterium radiobacter K84]
Length = 218
Score = 143 bits (360), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 111/186 (59%), Gaps = 5/186 (2%)
Query: 21 LLCTSLSSCFFHNNPVN-IYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
LL LS C + P N YDL+ S K + + Q++I P + L+S I++R SP
Sbjct: 35 LLAALLSGC--GSKPSNDTYDLSASVKASGPLMKGKQILIPPPTALQALDSNLIVIRVSP 92
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI 139
EIQYL +QWSDKL RM+Q KL+ FEN GK+ V P QG+ DYQI++ IRSFEI+
Sbjct: 93 SEIQYLGKAQWSDKLSRMVQSKLVEAFENTGKLGGVGVPGQGLAIDYQIVTDIRSFEIDA 152
Query: 140 --DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
+ A + +S+KI+N ++ Q VF + + FI+ L+ AF+ +++EI+D
Sbjct: 153 AGGQKSAAVEISVKILNDRTGTIKSQSVFRKVVPVTGGSNPDFIRGLDTAFAGVTAEIVD 212
Query: 198 WTLSSL 203
W+L SL
Sbjct: 213 WSLRSL 218
>gi|90417912|ref|ZP_01225824.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337584|gb|EAS51235.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 194
Score = 139 bits (351), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 116/193 (60%), Gaps = 6/193 (3%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYD--ESVQRHIQLIITEPITEKIL 68
+ + S LL LS+C + P + Y+++ D E R QL+I EP + +
Sbjct: 2 RAALKSSFVALLALGLSAC--ASTPPDTYEISPPPFSDVREGKSRR-QLLIPEPTALETI 58
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+S+ II++ SP IQ+L SQWSD+LPR++QL+L+ FEN G I + P QG+ DYQ+
Sbjct: 59 DSKRIIIKPSPNSIQFLGDSQWSDRLPRLVQLRLLQAFENTGSIGAIGVPGQGLAIDYQL 118
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ IR FE+N+ A + +S+K++N + +++ ++F+ + + F+ +L++A
Sbjct: 119 VMEIRRFEVNVTGAATAEVQISVKVLNDRNGTVLRTRIFNAQAPVNGAGNPAFVAALDKA 178
Query: 188 FSRISSEIIDWTL 200
F ++S+EI+DWT+
Sbjct: 179 FEQVSAEIVDWTI 191
>gi|114707112|ref|ZP_01440010.1| hypothetical protein FP2506_04376 [Fulvimarina pelagi HTCC2506]
gi|114537308|gb|EAU40434.1| hypothetical protein FP2506_04376 [Fulvimarina pelagi HTCC2506]
Length = 193
Score = 131 bits (330), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 96/147 (65%), Gaps = 1/147 (0%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
QL+I EP K ++SE I+V+ +P ++YL SQWSD+LPRM+QL+L+ FEN G++ V
Sbjct: 45 QLLIPEPTAIKTIDSERIVVKPTPYSVEYLADSQWSDRLPRMVQLRLLQAFENTGQVGAV 104
Query: 116 VKPNQGIYADYQIISAIRSFEIN-IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
P QG+ DYQII IR FE++ ++ A+I +S+K ++ + ++ ++F +
Sbjct: 105 GVPGQGLAIDYQIILEIRRFEVDVVNERQAVIEISVKALDDRNGTVRRTQIFTGRAPVAG 164
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLS 201
F+ +++RAF ++SSEI+ WTL+
Sbjct: 165 SGNSAFVAAIDRAFDQVSSEIVAWTLA 191
>gi|15965583|ref|NP_385936.1| hypothetical protein SMc00177 [Sinorhizobium meliloti 1021]
gi|307302703|ref|ZP_07582459.1| protein of unknown function DUF330 [Sinorhizobium meliloti BL225C]
gi|307318551|ref|ZP_07597985.1| protein of unknown function DUF330 [Sinorhizobium meliloti AK83]
gi|15074764|emb|CAC46409.1| Hypothetical protein SMc00177 [Sinorhizobium meliloti 1021]
gi|306895891|gb|EFN26643.1| protein of unknown function DUF330 [Sinorhizobium meliloti AK83]
gi|306903067|gb|EFN33658.1| protein of unknown function DUF330 [Sinorhizobium meliloti BL225C]
Length = 204
Score = 130 bits (326), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/183 (33%), Positives = 104/183 (56%), Gaps = 2/183 (1%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE 81
L L+ C + + L + + QL++ EP K L S+ I+VR S E
Sbjct: 23 LAAILAGCGSRQAANDTFSLASVPAVERPGATNRQLLVPEPTALKTLGSDQIVVRLSRSE 82
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
+QYL +QW D LPRM+Q +L+ F+N G+I V KP QG+ DYQ+I+ +R+FEI+ D
Sbjct: 83 LQYLARAQWGDSLPRMVQDRLVQTFDNTGRIR-VGKPGQGLAIDYQLITELRAFEISTDG 141
Query: 142 HC-AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
A++ + KI++ + ++ Q+ F + F+ +L+ AF+R++++I+ WTL
Sbjct: 142 AATAVVEIFAKILDDRNGTVRKQQAFRAVVPVRGAGNPAFVAALDAAFARVAADIVGWTL 201
Query: 201 SSL 203
SS+
Sbjct: 202 SSI 204
>gi|150396761|ref|YP_001327228.1| hypothetical protein Smed_1551 [Sinorhizobium medicae WSM419]
gi|150028276|gb|ABR60393.1| protein of unknown function DUF330 [Sinorhizobium medicae WSM419]
Length = 204
Score = 127 bits (319), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 109/195 (55%), Gaps = 2/195 (1%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILN 69
+ + ++ + L L+ C + + L D + + QL++ EP K L
Sbjct: 11 RAGAVRSAVVLTLGMVLAGCGSGKAVNDTFSLASVPTVDRASATNRQLLVPEPTALKTLG 70
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S+ I+VR S E+QYL +QW D LPRM+Q +L+ F+N G+I V KP QG+ DYQ+I
Sbjct: 71 SDQILVRLSSSELQYLAKAQWGDSLPRMVQDRLVQTFDNTGRIR-VGKPGQGLAIDYQLI 129
Query: 130 SAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ +R+FEI+ D A++ + KI++ + ++ Q+ F + F+ +L+ AF
Sbjct: 130 AELRAFEISTDGPARAVVEIFAKILDDRNGTVRKQQAFRAVVPVRGAGNPAFVAALDAAF 189
Query: 189 SRISSEIIDWTLSSL 203
++++++I+ WTL S+
Sbjct: 190 AQVAADIVGWTLRSI 204
>gi|227822228|ref|YP_002826199.1| putative ABC transporter protein [Sinorhizobium fredii NGR234]
gi|227341228|gb|ACP25446.1| putative ABC transporter protein [Sinorhizobium fredii NGR234]
Length = 205
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/183 (30%), Positives = 105/183 (57%), Gaps = 1/183 (0%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE 81
L L+ C + + L + + + Q+++ EP K L S+ I+VR S E
Sbjct: 23 LTALLAGCGTRQAANDTFSLASTPVVERPAATNRQILVPEPTALKTLGSDQIVVRLSKSE 82
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
+Q+L +QW D LPR++Q +L+ F+N G++ V KP QG+ DYQ+++ +R+FEI+ D
Sbjct: 83 LQFLAQAQWGDSLPRLVQDRLVQTFDNTGRVRGVGKPGQGLAIDYQLVTELRAFEISTDG 142
Query: 142 -HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
A++ + KI++ + ++ Q+ F ++ F+ +L+ AF++++++I+ WTL
Sbjct: 143 PDTAVVEIFAKILDDRNGTVRRQQAFRAVAPVQGAGNPAFVAALDAAFAQVAADIVSWTL 202
Query: 201 SSL 203
S+
Sbjct: 203 RSI 205
>gi|163759627|ref|ZP_02166712.1| putative ABC transporter protein [Hoeflea phototrophica DFL-43]
gi|162283224|gb|EDQ33510.1| putative ABC transporter protein [Hoeflea phototrophica DFL-43]
Length = 199
Score = 126 bits (316), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 107/172 (62%), Gaps = 1/172 (0%)
Query: 33 NNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSD 92
+ P + Y L+ + R+ Q++I+EP K L+SE I++R SP IQYL SQWSD
Sbjct: 28 STPPDTYGLSPAPAVTGDSARNRQILISEPTALKALDSEQIVIRPSPSAIQYLADSQWSD 87
Query: 93 KLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR-HCAIITMSLK 151
+LP+++Q KL+ FEN+G++ V +P +G+ D++II+AIRSFEI D A++ +S K
Sbjct: 88 RLPKIVQDKLVQAFENSGRVGGVGRPGEGLAIDFKIITAIRSFEIRADAGEQAVVEISAK 147
Query: 152 IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
++N + + +VF + ++++L+RAF + ++++ WTLS +
Sbjct: 148 VLNDRNGVVAATRVFRGNSSVTGTGNAAYVRALDRAFETVVADLVTWTLSRI 199
>gi|110633896|ref|YP_674104.1| ABC-type uncharacterized transport system auxiliary component-like
[Mesorhizobium sp. BNC1]
gi|110284880|gb|ABG62939.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Chelativorans sp. BNC1]
Length = 228
Score = 125 bits (313), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 105/187 (56%), Gaps = 5/187 (2%)
Query: 20 VLLCTSLSSC----FFHNNPVNIYDLTEST-KYDESVQRHIQLIITEPITEKILNSEDII 74
V+L L C F PV++YDLT + + + Q+++ EP KIL+ EDI
Sbjct: 40 VILSLMLGGCAAIPGFGPAPVDVYDLTAPALQLAAARRARTQVLVPEPEALKILDGEDIA 99
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+R+S +Q L G++WSD+LPR++Q L+ ++ +G + V +P +G+ DYQ+I IR+
Sbjct: 100 IRTSTGALQLLGGARWSDRLPRLVQSGLVEAYQKSGSFAGVGRPGEGLAIDYQVIVDIRT 159
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
FE+ + A + + +++++ + + F + + F+ +LN+AF+ + E
Sbjct: 160 FEVQVGNGLAQVQLFVRVLDDRTGQVRASRDFTTSAPVVGSGDVAFVAALNQAFNAATRE 219
Query: 195 IIDWTLS 201
I+DW+ S
Sbjct: 220 IVDWSRS 226
>gi|153009440|ref|YP_001370655.1| lipoprotein [Ochrobactrum anthropi ATCC 49188]
gi|151561328|gb|ABS14826.1| lipoprotein, hypothetical [Ochrobactrum anthropi ATCC 49188]
Length = 209
Score = 117 bits (293), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 108/192 (56%), Gaps = 4/192 (2%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDI 73
+ S+ VLL L+ C P++ ++L+ S R + QL++ P K L+SE+I
Sbjct: 19 TTSICVLLSILLAGCG-TTTPLDTFNLSAPQPGVSSPSRKNTQLLVPTPTALKALDSENI 77
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+V S+P I+YL G+QW D+L ++Q +L+ +EN G + +P G+ +YQI++ +R
Sbjct: 78 VVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGVFGGIGRPGDGLAINYQILTDLR 137
Query: 134 SFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
F I A++ +++K++N + + +VF + ++++L+ AF R
Sbjct: 138 MFGIQAYASPKLAVVELAVKLMNDKNGEVRATRVFRTAIPVSGATNAAYVKALDAAFERT 197
Query: 192 SSEIIDWTLSSL 203
+SEI+ WT+++L
Sbjct: 198 ASEIVSWTVTAL 209
>gi|254719098|ref|ZP_05180909.1| hypothetical protein Bru83_06095 [Brucella sp. 83/13]
gi|265984089|ref|ZP_06096824.1| lipoprotein [Brucella sp. 83/13]
gi|264662681|gb|EEZ32942.1| lipoprotein [Brucella sp. 83/13]
Length = 200
Score = 116 bits (290), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
S+AVLL L+ C P++ ++L T ++++QL+I P K L+SE+I+V
Sbjct: 12 SVAVLLTAFLAGCG-TTTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVV 70
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S+P I+YL G+QW D+L ++Q +L+ +EN G + +P G+ +YQ+++ +R F
Sbjct: 71 SSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGAFGGIGRPGDGLAINYQVLTDLRMF 130
Query: 136 EIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
I A++ M++++++ + +VF + + ++++L++AF + +
Sbjct: 131 GIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVN 190
Query: 194 EIIDWTLSSL 203
EI+ WT+S+L
Sbjct: 191 EIVSWTISTL 200
>gi|306838382|ref|ZP_07471227.1| lipoprotein [Brucella sp. NF 2653]
gi|306406522|gb|EFM62756.1| lipoprotein [Brucella sp. NF 2653]
Length = 209
Score = 115 bits (289), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
S+AVLL L+ C P++ ++L T ++++QL+I P K L+SE+I+V
Sbjct: 21 SVAVLLTAFLAGCG-TTTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVV 79
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S+P I+YL G+QW D+L ++Q +L+ +EN G + +P G+ +YQ+++ +R F
Sbjct: 80 SSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGAFGGIGRPGDGLAINYQVLTDLRMF 139
Query: 136 EIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
I A++ M++++++ + +VF + + ++++L++AF + +
Sbjct: 140 GIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVN 199
Query: 194 EIIDWTLSSL 203
EI+ WT+S+L
Sbjct: 200 EIVSWTISTL 209
>gi|306843896|ref|ZP_07476491.1| lipoprotein [Brucella sp. BO1]
gi|306275651|gb|EFM57375.1| lipoprotein [Brucella sp. BO1]
Length = 209
Score = 115 bits (287), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 109/190 (57%), Gaps = 4/190 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
S+A+LL L+ C P++ ++L T ++++QL+I P K L+SE+I+V
Sbjct: 21 SVAILLTAFLAGCG-TTTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVV 79
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S+P I+YL G+QW D+L ++Q +L+ +EN G + +P G+ +YQ+++ +R F
Sbjct: 80 SSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGAFGGIGRPGDGLAINYQVLTDLRMF 139
Query: 136 EIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
I A++ M++++++ + +VF + + ++++L++AF + +
Sbjct: 140 GIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVN 199
Query: 194 EIIDWTLSSL 203
EI+ WT+S+L
Sbjct: 200 EIVSWTISTL 209
>gi|239831968|ref|ZP_04680297.1| lipoprotein [Ochrobactrum intermedium LMG 3301]
gi|239824235|gb|EEQ95803.1| lipoprotein [Ochrobactrum intermedium LMG 3301]
Length = 209
Score = 114 bits (284), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Query: 5 LNKIIKKKII--SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITE 61
N + ++++ + S+ + L+ C P++ ++L+ S R ++QL++
Sbjct: 7 FNDMKSRRVVLRTASVPFIFGLLLAGCG-TTTPLDTFNLSAPQPGVTSPSRKNVQLLVPT 65
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN G + +P G
Sbjct: 66 PTALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGIFGGIGRPGDG 125
Query: 122 IYADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ +YQI++ +R F I A++ ++++++N + + +VF +
Sbjct: 126 LAINYQILTDLRMFGIQAYASPKLAVVELAVRLMNDKNGEVRATRVFRTAIPVGGATNAA 185
Query: 180 FIQSLNRAFSRISSEIIDWTLSSL 203
++++L+ AF R +SEI+ WT+++L
Sbjct: 186 YVKALDAAFERTASEIVSWTVTTL 209
>gi|304391805|ref|ZP_07373747.1| lipoprotein [Ahrensia sp. R2A130]
gi|303296034|gb|EFL90392.1| lipoprotein [Ahrensia sp. R2A130]
Length = 195
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 102/195 (52%), Gaps = 5/195 (2%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR--HIQLIITEPITE 65
+I K I + LA + + P Y+ + + +D V + QL++ P +
Sbjct: 1 MIFKAITTTLLAAFVLSGCQLLKAPEKPRETYEFS-APSFDGGVAGGTNAQLLVKLPTSL 59
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
K ++SE +I+R +P I Y+ G+QWSD +PR++Q KL+ FEN G KP G+ D
Sbjct: 60 KAIDSERMILRPTPKIITYVAGAQWSDSVPRLVQAKLVEAFENTGSAGATAKPGDGLVID 119
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+Q+I IR FEI A+I +S+K+++ +V ++F + +++ + +
Sbjct: 120 FQLIPDIRRFEIIGGE--AVIEVSIKLLSDKSGRVVASRIFTTSAATGGNQPENYVAAFD 177
Query: 186 RAFSRISSEIIDWTL 200
RAFS + ++I WT
Sbjct: 178 RAFSSFAEDVIAWTF 192
>gi|148558849|ref|YP_001258963.1| putative lipoprotein [Brucella ovis ATCC 25840]
gi|148370106|gb|ABQ60085.1| putative lipoprotein [Brucella ovis ATCC 25840]
Length = 200
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
S+A+LL L+ C P++ ++L T ++++QL+I P K L+SE+I+V
Sbjct: 12 SVAILLTAFLAGCG-TTTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVV 70
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S+P I+YL G+QW D+L ++Q +L+ +EN + +P G+ +YQ+++ +R F
Sbjct: 71 SSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGLAINYQVLTDLRMF 130
Query: 136 EIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
I A++ M++++++ + +VF + + ++++L++AF + +
Sbjct: 131 GIQAYTSPQTAVVEMAVRLLSNKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVN 190
Query: 194 EIIDWTLSSL 203
EI+ WT+S+L
Sbjct: 191 EIVSWTISTL 200
>gi|23501902|ref|NP_698029.1| putative lipoprotein [Brucella suis 1330]
gi|62289945|ref|YP_221738.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
gi|82699873|ref|YP_414447.1| hypothetical protein BAB1_1041 [Brucella melitensis biovar Abortus
2308]
gi|161618974|ref|YP_001592861.1| hypothetical protein BCAN_A1037 [Brucella canis ATCC 23365]
gi|225627500|ref|ZP_03785537.1| lipoprotein [Brucella ceti str. Cudo]
gi|225852527|ref|YP_002732760.1| hypothetical protein BMEA_A1063 [Brucella melitensis ATCC 23457]
gi|254689252|ref|ZP_05152506.1| hypothetical protein Babob68_03556 [Brucella abortus bv. 6 str.
870]
gi|254693736|ref|ZP_05155564.1| hypothetical protein Babob3T_03559 [Brucella abortus bv. 3 str.
Tulya]
gi|254697387|ref|ZP_05159215.1| hypothetical protein Babob28_06690 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701773|ref|ZP_05163601.1| hypothetical protein Bsuib55_13076 [Brucella suis bv. 5 str. 513]
gi|254704315|ref|ZP_05166143.1| hypothetical protein Bsuib36_10369 [Brucella suis bv. 3 str. 686]
gi|254706783|ref|ZP_05168611.1| hypothetical protein BpinM_07295 [Brucella pinnipedialis
M163/99/10]
gi|254710107|ref|ZP_05171918.1| hypothetical protein BpinB_07496 [Brucella pinnipedialis B2/94]
gi|254714108|ref|ZP_05175919.1| hypothetical protein BcetM6_12275 [Brucella ceti M644/93/1]
gi|254716835|ref|ZP_05178646.1| hypothetical protein BcetM_10519 [Brucella ceti M13/05/1]
gi|254730285|ref|ZP_05188863.1| hypothetical protein Babob42_03599 [Brucella abortus bv. 4 str.
292]
gi|256031603|ref|ZP_05445217.1| hypothetical protein BpinM2_13278 [Brucella pinnipedialis
M292/94/1]
gi|256044681|ref|ZP_05447585.1| hypothetical protein Bmelb1R_09313 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256061114|ref|ZP_05451268.1| hypothetical protein Bneo5_12212 [Brucella neotomae 5K33]
gi|256113575|ref|ZP_05454395.1| hypothetical protein Bmelb3E_12492 [Brucella melitensis bv. 3 str.
Ether]
gi|256159741|ref|ZP_05457488.1| hypothetical protein BcetM4_12248 [Brucella ceti M490/95/1]
gi|256255003|ref|ZP_05460539.1| hypothetical protein BcetB_12050 [Brucella ceti B1/94]
gi|256257502|ref|ZP_05463038.1| hypothetical protein Babob9C_09143 [Brucella abortus bv. 9 str.
C68]
gi|256369446|ref|YP_003106954.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260168732|ref|ZP_05755543.1| hypothetical protein BruF5_10258 [Brucella sp. F5/99]
gi|261222191|ref|ZP_05936472.1| lipoprotein [Brucella ceti B1/94]
gi|261317656|ref|ZP_05956853.1| lipoprotein [Brucella pinnipedialis B2/94]
gi|261752326|ref|ZP_05996035.1| lipoprotein [Brucella suis bv. 5 str. 513]
gi|261754984|ref|ZP_05998693.1| lipoprotein [Brucella suis bv. 3 str. 686]
gi|265988691|ref|ZP_06101248.1| lipoprotein [Brucella pinnipedialis M292/94/1]
gi|23347843|gb|AAN29944.1| lipoprotein, putative [Brucella suis 1330]
gi|62196077|gb|AAX74377.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82615974|emb|CAJ10997.1| Protein of unknown function DUF330 [Brucella melitensis biovar
Abortus 2308]
gi|161335785|gb|ABX62090.1| Hypothetical protein BCAN_A1037 [Brucella canis ATCC 23365]
gi|225617505|gb|EEH14550.1| lipoprotein [Brucella ceti str. Cudo]
gi|225640892|gb|ACO00806.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|255999606|gb|ACU48005.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260920775|gb|EEX87428.1| lipoprotein [Brucella ceti B1/94]
gi|261296879|gb|EEY00376.1| lipoprotein [Brucella pinnipedialis B2/94]
gi|261742079|gb|EEY30005.1| lipoprotein [Brucella suis bv. 5 str. 513]
gi|261744737|gb|EEY32663.1| lipoprotein [Brucella suis bv. 3 str. 686]
gi|264660888|gb|EEZ31149.1| lipoprotein [Brucella pinnipedialis M292/94/1]
Length = 200
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
S+A+LL L+ C P++ ++L T ++++QL+I P K L+SE+I+V
Sbjct: 12 SVAILLTAFLAGCG-TTTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVV 70
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S+P I+YL G+QW D+L ++Q +L+ +EN + +P G+ +YQ+++ +R F
Sbjct: 71 SSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGLAINYQVLTDLRMF 130
Query: 136 EIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
I A++ M++++++ + +VF + + ++++L++AF + +
Sbjct: 131 GIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVN 190
Query: 194 EIIDWTLSSL 203
EI+ WT+S+L
Sbjct: 191 EIVSWTISTL 200
>gi|189024188|ref|YP_001934956.1| Protein of unknown function DUF330 [Brucella abortus S19]
gi|237815446|ref|ZP_04594444.1| Protein of unknown function DUF330 [Brucella abortus str. 2308 A]
gi|260545306|ref|ZP_05821047.1| lipoprotein [Brucella abortus NCTC 8038]
gi|260564027|ref|ZP_05834513.1| lipoprotein [Brucella melitensis bv. 1 str. 16M]
gi|260566438|ref|ZP_05836908.1| lipoprotein [Brucella suis bv. 4 str. 40]
gi|260754758|ref|ZP_05867106.1| lipoprotein [Brucella abortus bv. 6 str. 870]
gi|260757981|ref|ZP_05870329.1| lipoprotein [Brucella abortus bv. 4 str. 292]
gi|260761804|ref|ZP_05874147.1| lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|260883778|ref|ZP_05895392.1| lipoprotein [Brucella abortus bv. 9 str. C68]
gi|261214010|ref|ZP_05928291.1| lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|261218637|ref|ZP_05932918.1| lipoprotein [Brucella ceti M13/05/1]
gi|261314251|ref|ZP_05953448.1| lipoprotein [Brucella pinnipedialis M163/99/10]
gi|261321865|ref|ZP_05961062.1| lipoprotein [Brucella ceti M644/93/1]
gi|261325115|ref|ZP_05964312.1| lipoprotein [Brucella neotomae 5K33]
gi|261758210|ref|ZP_06001919.1| lipoprotein [Brucella sp. F5/99]
gi|265991105|ref|ZP_06103662.1| lipoprotein [Brucella melitensis bv. 1 str. Rev.1]
gi|265994942|ref|ZP_06107499.1| lipoprotein [Brucella melitensis bv. 3 str. Ether]
gi|265998155|ref|ZP_06110712.1| lipoprotein [Brucella ceti M490/95/1]
gi|265999468|ref|ZP_05466515.2| lipoprotein [Brucella melitensis bv. 2 str. 63/9]
gi|297248346|ref|ZP_06932064.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|189019760|gb|ACD72482.1| Protein of unknown function DUF330 [Brucella abortus S19]
gi|237790283|gb|EEP64493.1| Protein of unknown function DUF330 [Brucella abortus str. 2308 A]
gi|260096713|gb|EEW80588.1| lipoprotein [Brucella abortus NCTC 8038]
gi|260154043|gb|EEW89135.1| lipoprotein [Brucella melitensis bv. 1 str. 16M]
gi|260155956|gb|EEW91036.1| lipoprotein [Brucella suis bv. 4 str. 40]
gi|260668299|gb|EEX55239.1| lipoprotein [Brucella abortus bv. 4 str. 292]
gi|260672236|gb|EEX59057.1| lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|260674866|gb|EEX61687.1| lipoprotein [Brucella abortus bv. 6 str. 870]
gi|260873306|gb|EEX80375.1| lipoprotein [Brucella abortus bv. 9 str. C68]
gi|260915617|gb|EEX82478.1| lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|260923726|gb|EEX90294.1| lipoprotein [Brucella ceti M13/05/1]
gi|261294555|gb|EEX98051.1| lipoprotein [Brucella ceti M644/93/1]
gi|261301095|gb|EEY04592.1| lipoprotein [Brucella neotomae 5K33]
gi|261303277|gb|EEY06774.1| lipoprotein [Brucella pinnipedialis M163/99/10]
gi|261738194|gb|EEY26190.1| lipoprotein [Brucella sp. F5/99]
gi|262552623|gb|EEZ08613.1| lipoprotein [Brucella ceti M490/95/1]
gi|262766055|gb|EEZ11844.1| lipoprotein [Brucella melitensis bv. 3 str. Ether]
gi|263001889|gb|EEZ14464.1| lipoprotein [Brucella melitensis bv. 1 str. Rev.1]
gi|263094127|gb|EEZ18049.1| lipoprotein [Brucella melitensis bv. 2 str. 63/9]
gi|297175515|gb|EFH34862.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|326409043|gb|ADZ66108.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538752|gb|ADZ86967.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 209
Score = 112 bits (279), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
S+A+LL L+ C P++ ++L T ++++QL+I P K L+SE+I+V
Sbjct: 21 SVAILLTAFLAGCG-TTTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVV 79
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S+P I+YL G+QW D+L ++Q +L+ +EN + +P G+ +YQ+++ +R F
Sbjct: 80 SSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGLAINYQVLTDLRMF 139
Query: 136 EIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
I A++ M++++++ + +VF + + ++++L++AF + +
Sbjct: 140 GIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVN 199
Query: 194 EIIDWTLSSL 203
EI+ WT+S+L
Sbjct: 200 EIVSWTISTL 209
>gi|294852387|ref|ZP_06793060.1| hypothetical protein BAZG_01314 [Brucella sp. NVSL 07-0026]
gi|294820976|gb|EFG37975.1| hypothetical protein BAZG_01314 [Brucella sp. NVSL 07-0026]
Length = 209
Score = 111 bits (278), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
S+A+LL L+ C P++ ++L T ++++QL+I P K L+SE+I+V
Sbjct: 21 SVAILLTAFLAGCG-TTTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVV 79
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S+P I+YL G+QW D+L ++Q +L+ +EN + +P G+ +YQ+++ +R F
Sbjct: 80 SSAPGSIKYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGLAINYQVLTDLRMF 139
Query: 136 EIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
I A++ M++++++ + +VF + + ++++L++AF + +
Sbjct: 140 GIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVN 199
Query: 194 EIIDWTLSSL 203
EI+ WT+S+L
Sbjct: 200 EIVSWTISTL 209
>gi|163843290|ref|YP_001627694.1| hypothetical protein BSUIS_A1065 [Brucella suis ATCC 23445]
gi|163674013|gb|ABY38124.1| Hypothetical protein BSUIS_A1065 [Brucella suis ATCC 23445]
Length = 200
Score = 109 bits (273), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 108/190 (56%), Gaps = 4/190 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
S+A+LL L+ C P++ ++L T ++++QL+I P K L+SE+I+V
Sbjct: 12 SVAILLTAFLAGCG-TTTPLDTFNLSTPHPMVTVPKRKNLQLLIPGPAALKALDSENIVV 70
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S+P I+YL G+QW D+L ++Q +L+ +EN + +P G+ +YQ+++ +R F
Sbjct: 71 SSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGLAINYQVLTDLRMF 130
Query: 136 EIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
I A++ M++++++ + +VF + + ++++L++AF + +
Sbjct: 131 GIQAYTSPQTAVVEMAVRLLSDKTGEVRVTRVFRTAIPVTGTSNAAYVKALDKAFDQTVN 190
Query: 194 EIIDWTLSSL 203
EI+ WT+S+L
Sbjct: 191 EIVSWTISTL 200
>gi|319783792|ref|YP_004143268.1| hypothetical protein Mesci_4105 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169680|gb|ADV13218.1| protein of unknown function DUF330 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 235
Score = 109 bits (272), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 96/168 (57%), Gaps = 2/168 (1%)
Query: 35 PVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
P++ ++L+ + D Q++I +P K L+S++I+++ S IQYL G+QW+D+L
Sbjct: 67 PLDTFELSAPS-VDAHGHSRRQILIAQPSALKALDSQNIVIKPSDRSIQYLKGAQWADRL 125
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINID-RHCAIITMSLKII 153
P ++Q +L F+ +G + V KP +G+ DYQ+I IRSFE+ +D A + + ++I+
Sbjct: 126 PLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEIRSFEVRVDGGEHAEVDLFVRIL 185
Query: 154 NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
N + + K F + ++ +L++AF + +I+ WT S
Sbjct: 186 NDRNGEVRASKSFTAAAPVSGSGNPAYVSALDKAFGDAAGQIVRWTDS 233
>gi|13470956|ref|NP_102525.1| hypothetical protein mll0797 [Mesorhizobium loti MAFF303099]
gi|14021699|dbj|BAB48311.1| mll0797 [Mesorhizobium loti MAFF303099]
Length = 197
Score = 108 bits (270), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 96/166 (57%), Gaps = 2/166 (1%)
Query: 35 PVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
P++ ++L+ + D Q++I +P K L+S++I+++ S IQYL G+QW+D+L
Sbjct: 29 PLDTFELS-APSVDAHGHSRKQILIAQPSALKALDSQNIVIKPSDRSIQYLKGAQWADRL 87
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINID-RHCAIITMSLKII 153
P ++Q +L F+ +G + V KP +G+ DYQ+I IRSFE+++D A + + ++++
Sbjct: 88 PLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEIRSFEVSVDGGEHAEVDLFVRLL 147
Query: 154 NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
N + + K F + +I++L+ AF + +I+ WT
Sbjct: 148 NDRNGEVRASKSFTASAPVSGSGNPAYIKALDSAFGDAAKQIVRWT 193
>gi|218678849|ref|ZP_03526746.1| putative ABC transporter protein [Rhizobium etli CIAT 894]
Length = 173
Score = 108 bits (269), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 78/130 (60%), Gaps = 4/130 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
IK +++ L L+ LS C + YDL+ + D + Q++I P + L
Sbjct: 13 IKGTVVALPLIALI---LSGCGTSAK-NDTYDLSAAVDGDGPAAKSRQILIAGPTALRAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R S EIQYL +QW DKLPRM+Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 DSEQIVIRVSSSEIQYLSRAQWGDKLPRMVQSKLVEAFENSGKLGGVGMPGQGLAIDYQV 128
Query: 129 ISAIRSFEIN 138
++ IRSFEI+
Sbjct: 129 VTDIRSFEID 138
>gi|298292074|ref|YP_003694013.1| hypothetical protein Snov_2098 [Starkeya novella DSM 506]
gi|296928585|gb|ADH89394.1| protein of unknown function DUF330 [Starkeya novella DSM 506]
Length = 223
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 96/192 (50%), Gaps = 6/192 (3%)
Query: 16 CSLAVLLCTSLSSCF----FHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
C+ + + +L C + V +DLT + ++ + L++ P +L++E
Sbjct: 30 CAGTLAVALTLGGCGAILAGGDKSVPTFDLTAPSDFNAPRRGTGLLVVGPPTALAVLDTE 89
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
I+V +P +I YL G+QWSD+LP + Q +LI +FEN + +V + G+ ADY +++
Sbjct: 90 RIVVEPAPGQITYLSGAQWSDRLPALFQARLIESFENGNRARSVGRAGDGLTADYTLLTD 149
Query: 132 IRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+RSF + A++ +S KI+ A + +VF + Q+L+ A
Sbjct: 150 LRSFGLQTSDGGPVAVVEVSAKIVGATSGRIAAAQVFKASAPAASTSGPQATQALDAASD 209
Query: 190 RISSEIIDWTLS 201
++ EI+ W S
Sbjct: 210 QVFIEIVRWASS 221
>gi|17987245|ref|NP_539879.1| membrane lipoprotein lipid attachment site containing protein
[Brucella melitensis bv. 1 str. 16M]
gi|17982919|gb|AAL52143.1| membrane lipoprotein lipid attachment site containing protein
[Brucella melitensis bv. 1 str. 16M]
Length = 185
Score = 107 bits (266), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 21 LLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
+L L+ C P++ ++L T ++++QL+I P K L+SE+I+V S+P
Sbjct: 1 MLTAFLAGCG-TTTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVVSSAP 59
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEIN- 138
I+YL G+QW D+L ++Q +L+ +EN + +P G+ +YQ+++ +R F I
Sbjct: 60 GSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGLAINYQVLTDLRMFGIQA 119
Query: 139 -IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
A++ M++++++ + +VF + + ++++L++AF + +EI+
Sbjct: 120 YTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVNEIVS 179
Query: 198 WTLSSL 203
WT+S+L
Sbjct: 180 WTISTL 185
>gi|260463971|ref|ZP_05812167.1| protein of unknown function DUF330 [Mesorhizobium opportunistum
WSM2075]
gi|259030346|gb|EEW31626.1| protein of unknown function DUF330 [Mesorhizobium opportunistum
WSM2075]
Length = 235
Score = 106 bits (265), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
C +L P++ ++L+ + D Q++I +P K L+S++I+++ S I
Sbjct: 58 CAALGG---KPAPLDTFELSAPS-VDAHGHSSKQILIAQPSALKALDSQNIVIKPSDRSI 113
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINID-R 141
QYL G+QW+D+LP ++Q +L F+ +G + V KP +G+ DYQ+I +RSFE+ +D
Sbjct: 114 QYLKGAQWADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEVRSFEVRVDGG 173
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
A + + ++++N + + K F+ + ++ +L+ AF + +I+ WT S
Sbjct: 174 EHAEVDLFVRLLNDRNGEVRASKSFNASAPVSGKGNSAYVGALDNAFGDAARQIVRWTDS 233
>gi|158423840|ref|YP_001525132.1| ABC-type uncharacterized transport system protein [Azorhizobium
caulinodans ORS 571]
gi|158330729|dbj|BAF88214.1| ABC-type uncharacterized transport system protein [Azorhizobium
caulinodans ORS 571]
Length = 208
Score = 105 bits (263), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
L V L +L+ C + P+ YDL+ T + + QL++ P +L+SE I+V
Sbjct: 22 LGVFLTLALAGC--ASAPIPTYDLSAPTGFAARGGGNGQLVVVTPTALAVLDSEKIVVEP 79
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
+P ++ YL +QWSD+L ++Q + I FEN+ + V +P G+ DYQ+ +RSF I
Sbjct: 80 TPGQVTYLPEAQWSDRLTSLLQARTIQAFENSSRQRRVARPGDGVTGDYQLNMDVRSFGI 139
Query: 138 NI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ + A++ +S K+I +V ++F + + +L++A +++ E+
Sbjct: 140 KVLPEGTFAVVEISAKLIATQTGRIVSARIFSARVPVASVSGTSATTALDQASNQVLMEL 199
Query: 196 IDW 198
+ W
Sbjct: 200 VRW 202
>gi|170748373|ref|YP_001754633.1| hypothetical protein Mrad2831_1955 [Methylobacterium radiotolerans
JCM 2831]
gi|170654895|gb|ACB23950.1| protein of unknown function DUF330 [Methylobacterium radiotolerans
JCM 2831]
Length = 192
Score = 105 bits (261), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 92/160 (57%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
+DL + ++++EP++ + ++ IIVR + + +L G QW+D+LPR+I
Sbjct: 28 FDLAALPAAGRPIAAGRSIVVSEPVSIQPFEADRIIVRENGGALSFLGGGQWADRLPRLI 87
Query: 99 QLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDN 158
Q +LI + EN+G++ +V +P + ADYQ+IS IR+F++ A++ +SLK++
Sbjct: 88 QTRLIQSLENSGRLRSVSRPGDKVVADYQLISEIRAFDVQSGTGEAVVDLSLKLVADGTG 147
Query: 159 SLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
+ ++F + K + ++L++A + + ++++ W
Sbjct: 148 KVAAARIFTARVPVSKIDAGSGARALDQALTVVLADVVRW 187
>gi|182680398|ref|YP_001834544.1| hypothetical protein Bind_3498 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636281|gb|ACB97055.1| Mammalian cell entry related domain protein [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 378
Score = 103 bits (256), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 101/178 (56%), Gaps = 5/178 (2%)
Query: 26 LSSCFFHNNPVNIYDLT--ESTKYDESVQRHI-QLIITEPITEKILNSEDIIVRSSPIEI 82
L+ P +YDLT ++T + + Q++I EP T + +++ ++ RS E
Sbjct: 196 LAGGGPEAKPKPVYDLTVTQATPAPAPKGKKLGQIVIAEPTTTVVFDTQRLLARSKDGEF 255
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINID-R 141
QW+D +P+++Q K++ +FEN G I +V P +G+ YQ+++ IR+F + D R
Sbjct: 256 TPQGEMQWADSIPKLVQEKMVQSFENEGLIGSVTAPVEGVTRQYQLLTDIRNFAVTSDSR 315
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
A + +S+K++N + + G K+FHV +E ++ + + ++AF++ +E+I WT
Sbjct: 316 PSADVELSVKLMNEEGHVIAG-KIFHVTVPVESEDTSKVVAAFSQAFNQAMTELISWT 372
>gi|154248037|ref|YP_001418995.1| hypothetical protein Xaut_4116 [Xanthobacter autotrophicus Py2]
gi|154162122|gb|ABS69338.1| protein of unknown function DUF330 [Xanthobacter autotrophicus Py2]
Length = 213
Score = 101 bits (252), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 90/182 (49%), Gaps = 4/182 (2%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSS 78
+L +L+ C + P Y+L+ + + + Q+++ P +LN++ ++V
Sbjct: 29 GAVLTLALAGC--GSTPTPTYNLSAPSGFTAGGSGNGQMVVVAPTALAVLNTDKVMVEPG 86
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEIN 138
P ++ YL +QWSD LP ++Q + I FEN K+ V +P G+ ADYQ++ IR+F +
Sbjct: 87 PGQVAYLSDAQWSDTLPALLQARTIQAFENASKLRRVARPGDGVNADYQLVIDIRTFALR 146
Query: 139 IDRH--CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
I A++ +S K+I ++ +VF +L+ A ++ +++
Sbjct: 147 ITDQGPVAVVELSAKLIGTQSGRILAAQVFKAAVPAASTAGPVATAALDSAQEQVLVQMV 206
Query: 197 DW 198
W
Sbjct: 207 RW 208
>gi|182680566|ref|YP_001834712.1| hypothetical protein Bind_3671 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636449|gb|ACB97223.1| protein of unknown function DUF330 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 198
Score = 99.4 bits (246), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 100/179 (55%), Gaps = 7/179 (3%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTEST-KYDESVQRHIQLIITEPITEKILNSEDIIVRSSPI 80
L +L+ C + P +DL+ S + QR QL I EP+ + ++S+ I+VR
Sbjct: 22 LSVTLAGC--ASGPPPTFDLSPSAGPFSVRAQRG-QLAIAEPVADVPIDSQRIVVRVQDD 78
Query: 81 EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINID 140
+ +L G+QW+D+LP ++Q +LI FEN + V +P G+ A+Y + + IR FE+ +
Sbjct: 79 SVAFLRGAQWADRLPSLVQTRLIETFENAHLLREVGRP--GMAANYTLSTEIRRFELAVG 136
Query: 141 RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
++ A++ ++ +++NA +V +VF + D+ +L++A S++ +I+ W
Sbjct: 137 QNQAVVVIAAQLVNA-TGKIVHGRVFSAKAPAVHDDGASATAALDQALSQVMQQIVVWA 194
>gi|316935756|ref|YP_004110738.1| mammalian cell entry related domain-containing protein
[Rhodopseudomonas palustris DX-1]
gi|315603470|gb|ADU46005.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris DX-1]
Length = 399
Score = 98.6 bits (244), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 38 IYDLTESTKYDE-SVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
+YDL + + S QL I E T + +S+ +++ +EIQ G+QWSD +P+
Sbjct: 203 VYDLAAAAGFPPPSPPLKGQLTIPESNTVILFDSQKMLLAPG-LEIQAFAGAQWSDSIPK 261
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH--CAIITMSLKIIN 154
M+Q KLI +FEN ++PN + DYQ+++ IRSF++ +R A I S KII+
Sbjct: 262 MLQEKLIQSFENYDIAHAPMRPNDAVQPDYQLLTDIRSFQVVGERDNLKAEIAFSGKIID 321
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
D LV +VF L K + + + +++F I+ +++ WT +L
Sbjct: 322 -KDGKLVAARVFQQATTLAKPEPMAAVAAFDKSFDAIAKDLVPWTAQAL 369
>gi|192293076|ref|YP_001993681.1| mammalian cell entry related domain protein [Rhodopseudomonas
palustris TIE-1]
gi|192286825|gb|ACF03206.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris TIE-1]
Length = 398
Score = 98.2 bits (243), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 33 NNPVN---IYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGS 88
N PV +YDL+ +T + S QL I E T + +S+ +++ +E+ G+
Sbjct: 195 NEPVVKKVVYDLSAATGFPPSSPPLKGQLTIPESNTVVLFDSQKMLLAPG-LEVPAFAGA 253
Query: 89 QWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI--NIDRHCAII 146
QWSD LP+M+Q KLI +FEN ++PN + DYQ+++ IRSF++ D A I
Sbjct: 254 QWSDSLPKMLQEKLIQSFENYDIAHAPMRPNDAVQPDYQLLTDIRSFQVIGEGDALRAEI 313
Query: 147 TMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
S KII+ D LV ++F L+K + + +++F I+ E++ W +L
Sbjct: 314 AFSAKIID-KDGKLVAARLFQQASPLDKPEPAAAVSAFDKSFDTIAKELVPWAAQAL 369
>gi|39937296|ref|NP_949572.1| hypothetical protein RPA4236 [Rhodopseudomonas palustris CGA009]
gi|39651154|emb|CAE29677.1| Mce4/Rv3499c/MTV023.06c protein [Rhodopseudomonas palustris CGA009]
Length = 398
Score = 98.2 bits (243), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 33 NNPVN---IYDLTESTKYDE-SVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGS 88
N PV +YDL+ +T + S QL I E T + +S+ +++ +E+ G+
Sbjct: 195 NEPVVKKVVYDLSAATGFPPPSPPLKGQLTIPESNTVVLFDSQKMLLAPG-LEVPAFAGA 253
Query: 89 QWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI--NIDRHCAII 146
QWSD LP+M+Q KLI +FEN ++PN + DYQ+++ IRSF++ D A I
Sbjct: 254 QWSDSLPKMLQEKLIQSFENYDIAHAPMRPNDAVQPDYQLLTDIRSFQVIGEGDALRAEI 313
Query: 147 TMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
S KII+ D LV ++F L+K + + +++F I+ E++ W +L
Sbjct: 314 AFSAKIID-KDGKLVAARLFQQASPLDKPEPAAAVSAFDKSFDTIAKELVPWAAQAL 369
>gi|254470354|ref|ZP_05083758.1| membrane lipoprotein lipid attachment site containing protein
[Pseudovibrio sp. JE062]
gi|211960665|gb|EEA95861.1| membrane lipoprotein lipid attachment site containing protein
[Pseudovibrio sp. JE062]
Length = 261
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 10/203 (4%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRH-IQLIITEPI 63
+KK ++ AVLL L+ C + P +Y LT V+ Q+++ P+
Sbjct: 26 FGSTLKKLVVG---AVLLG-GLAGCG-ASGPEALYGLTAPRDVPVKVRASDYQVLVATPV 80
Query: 64 TEKILNSEDIIV--RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
+ L++ +I V PI Y W+D LPR+ Q KL+ EN GK+ V +P QG
Sbjct: 81 ALQALDTSNIAVTQGGGPI-YSYFPKVAWTDTLPRVFQAKLVETLENTGKLRGVSQPGQG 139
Query: 122 IYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ DYQ+ + +R+FE+ +D A + ++ +I++ D +G +VF D
Sbjct: 140 LLIDYQLQTTLRAFELQVDGGDKAYVEVAARIVDDRDGRSIGMRVFAASVPTTGDTVTDA 199
Query: 181 IQSLNRAFSRISSEIIDWTLSSL 203
I +LN A + S+I W+++++
Sbjct: 200 IPALNAASDNVLSQIASWSVNTV 222
>gi|86748500|ref|YP_484996.1| hypothetical protein RPB_1375 [Rhodopseudomonas palustris HaA2]
gi|86571528|gb|ABD06085.1| Mammalian cell entry related [Rhodopseudomonas palustris HaA2]
Length = 390
Score = 95.9 bits (237), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 91/168 (54%), Gaps = 4/168 (2%)
Query: 38 IYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
+YDL ++ + V+ QL I EP T + +S+ ++V +++ G+QWSD +P+
Sbjct: 203 VYDLQPASGFSPPVRSMKGQLTIPEPTTVVLYDSQKMLVAPG-LDLPAFAGAQWSDSIPK 261
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINA 155
M+Q KLI +FEN ++PN + DYQ++ IRSF++ + A ++ KII+
Sbjct: 262 MLQEKLIQSFENYDIARPPLRPNDAVTPDYQLLIDIRSFQVAGEGAPSADVSFGAKIID- 320
Query: 156 HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ LV ++F +L++ + + AF + E+I WT+ SL
Sbjct: 321 KNGRLVSARLFRQSARLDRPEPAAAVTAFETAFGAAAKELIPWTVDSL 368
>gi|328543115|ref|YP_004303224.1| Putative ABC transporter protein [Polymorphum gilvum SL003B-26A1]
gi|326412861|gb|ADZ69924.1| Putative ABC transporter protein [Polymorphum gilvum SL003B-26A1]
Length = 200
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 1/167 (0%)
Query: 35 PVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
P +Y LT + R +Q+++ P K L++ +I V Y + W+D L
Sbjct: 31 PSALYGLTAPDDIADGRSRPVQVLVPAPRALKALDTGNIAVVDKGPAYSYFPQAAWADTL 90
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKII 153
P ++Q KL+ EN G++ V P +G+ D+Q+ + +RSFE+NID A++ ++ K+I
Sbjct: 91 PNVVQAKLVQTLENTGRLRGVGLPGEGLLIDFQLQTDLRSFELNIDGPDRAVVEIAAKLI 150
Query: 154 NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
N + V +VF + ++NRA ++ EI W L
Sbjct: 151 NDRNGRTVASRVFTAVVPAGGTTVDRAVAAMNRAADQVFREIAVWVL 197
>gi|159044591|ref|YP_001533385.1| hypothetical protein Dshi_2047 [Dinoroseobacter shibae DFL 12]
gi|157912351|gb|ABV93784.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 208
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 98/197 (49%), Gaps = 10/197 (5%)
Query: 15 SCSLAVLLCTSLSSCFF------HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+CS+A+L +SLS C + +++Y+L E R ++I P T L
Sbjct: 9 ACSVALLTLSSLSGCAAVSALGSASEVLDVYELQAPRTLPEGPVRARDVVIELPTTTGAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
++ I++R P++ QYL G +W D P M+Q ++ E +G++ V + GI DY +
Sbjct: 69 QTDRIMIRPDPLQAQYLPGVRWGDATPVMVQTLMLRTLEASGRLGYVGRRPLGINGDYAV 128
Query: 129 ISAIRSFEINI--DRHCAIITMSL--KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
++ I F+ + A++ +SL +++ D ++G + F V+ + ++ I
Sbjct: 129 LTEIVDFQAEAVPEGPGAVVVLSLIGRVVRESDLRIMGTRRFAVQVPVASVSEAEVIAGF 188
Query: 185 NRAFSRISSEIIDWTLS 201
++A ++ +E W LS
Sbjct: 189 DQAAQQLFAEHGAWVLS 205
>gi|254513148|ref|ZP_05125214.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221533147|gb|EEE36142.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 212
Score = 90.5 bits (223), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIVRS 77
A+ CT L + + P ++Y LT + + ++ R Q+++ EP +N++ I V+
Sbjct: 7 ALAGCTGLGTLRQASKPNDLYLLTPKSTFSSALPRIQKQIVVEEPTATAAVNTDQIAVQP 66
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
+P+++QYL ++W D+ P ++Q ++ ++EN+GK++ V + G+ ADY I +R F+
Sbjct: 67 TPLQVQYLPQARWVDRAPLIVQALMVESYENSGKVAAVGRSTVGLRADYVIAPDLREFQG 126
Query: 138 NIDRHCAIIT-------MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
+ T +++KII+ +D+ ++ F D +++ + A +
Sbjct: 127 VVISQTEDATTVRVEVRINIKIIDEYDDKIIASSSFQETVLATSDQTSDLVEAFDIALGK 186
Query: 191 ISSEIIDWTL 200
+ ++W++
Sbjct: 187 AMRDCVEWSI 196
>gi|90425516|ref|YP_533886.1| hypothetical protein RPC_4041 [Rhodopseudomonas palustris BisB18]
gi|90107530|gb|ABD89567.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB18]
Length = 367
Score = 90.1 bits (222), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 38 IYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRM 97
+YDL +T QL I EP + +++ +++ ++ G QWSD +P++
Sbjct: 203 VYDLRAATDLPPGKPIKGQLAIAEPTYVVMFDTQRLLLAPG-LDYPAFAGFQWSDSIPKL 261
Query: 98 IQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI-ITMSLKIINAH 156
+Q KLI +FEN ++ + + AD+Q++ IRSF++ A + S KI++
Sbjct: 262 VQAKLIQSFENYDIAHAPLRASDALQADHQLLIDIRSFQVGGSPDLAAEVAFSAKIVS-K 320
Query: 157 DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
D V K+F L+K L + + N AF ++ E+I WT S+L
Sbjct: 321 DGKQVAAKLFRASAPLDKPEPLAALAAFNEAFGSVAKELIQWTASAL 367
>gi|220924822|ref|YP_002500124.1| hypothetical protein Mnod_4964 [Methylobacterium nodulans ORS 2060]
gi|219949429|gb|ACL59821.1| protein of unknown function DUF330 [Methylobacterium nodulans ORS
2060]
Length = 200
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 85/160 (53%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
+DLT + L++ EP+ + ++ IIVR + +L G QW+D+LPR++
Sbjct: 36 FDLTAVPGAARAGAARRSLVVAEPVGLQPFEADRIIVREPGGSLSFLGGGQWADRLPRLV 95
Query: 99 QLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDN 158
Q +LI + EN ++ +V +P I AD +++ IR+F+I A++ +S K+I+
Sbjct: 96 QARLIQSLENANRLRSVSRPGDKIAADTLLVTEIRAFDIAAGTREAVVDLSAKLISDATG 155
Query: 159 SLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
++V +VF ++ L+RA S + ++++ W
Sbjct: 156 AVVAARVFEARVPVQDVTPASAANGLDRALSIVLADVVRW 195
>gi|91975835|ref|YP_568494.1| hypothetical protein RPD_1355 [Rhodopseudomonas palustris BisB5]
gi|91682291|gb|ABE38593.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB5]
Length = 390
Score = 89.0 bits (219), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 89/178 (50%), Gaps = 10/178 (5%)
Query: 33 NNPVN---IYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGS 88
N PV +YDL + + + QL I EP T + +S+ +++ +E+ G+
Sbjct: 195 NEPVVKKVVYDLQPAKGFPPPTKSIRGQLTIPEPTTVVLYDSQKMLLAPG-LELPAFAGA 253
Query: 89 QWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC---AI 145
QWSD +P+M+Q KLI +FEN ++PN + DYQ++ +RSF+I R A
Sbjct: 254 QWSDSIPKMLQEKLIQSFENYDIAHPPLRPNDAVQPDYQLLIDLRSFQI-AGREAELVAE 312
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ KII+ LV ++F KL+ + + + AF + +I WT+ SL
Sbjct: 313 VAFGAKIID-KGGKLVAARLFQQSAKLDNPHPAAAVTAFETAFDATAKALIPWTVDSL 369
>gi|217978937|ref|YP_002363084.1| protein of unknown function DUF330 [Methylocella silvestris BL2]
gi|217504313|gb|ACK51722.1| protein of unknown function DUF330 [Methylocella silvestris BL2]
Length = 207
Score = 88.6 bits (218), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 6/175 (3%)
Query: 26 LSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
L++C + P +DL T + R Q+ I P ++S I+VR +I
Sbjct: 34 LAAC--ASAPPATFDLDAAPTGFSAKQARRAQIAIAAPSALPPVDSNRIVVRVGEDQIAL 91
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA 144
L G+ WS++LP ++Q KLIA+F+N I VV P G+ ADY++ S IRSFE R
Sbjct: 92 LAGAAWSNQLPALLQAKLIASFQNASLIRAVVSP--GMPADYELRSQIRSFEYVAGRGAV 149
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
+ +S +I+ +V K+F ++ + +LN A + + +I+ WT
Sbjct: 150 FVEISAQIVGGAGR-IVAGKIFSATAPAPANDGATVVAALNAATADVMRQIVRWT 203
>gi|114764124|ref|ZP_01443363.1| hypothetical protein 1100011001333_R2601_15737 [Pelagibaca
bermudensis HTCC2601]
gi|114543482|gb|EAU46497.1| hypothetical protein R2601_15737 [Roseovarius sp. HTCC2601]
Length = 201
Score = 88.2 bits (217), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 90/189 (47%), Gaps = 4/189 (2%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVR 76
+ A+ C +L++ + P+ +Y+L +R +++I+ EP+ L +E I++R
Sbjct: 10 AAALTGCGALTALEEASTPLEVYELRTPEVAQSGARRGVEVIVEEPLASGSLATERIMIR 69
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
SP++ QYL G +W+D P M+Q L+ + G + +V + G ADY ++ + F+
Sbjct: 70 PSPLQAQYLPGVRWADPAPAMLQTMLVRSLSETGGLGSVSRRPVGPRADYAVLGELTDFQ 129
Query: 137 I----NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
+ + L+++ D +V + F E + + + + A SR+
Sbjct: 130 GEAIEGAESGLVRVRFVLRVVREGDARVVATRSFEATELAAATDPDSIVAAFDSATSRLL 189
Query: 193 SEIIDWTLS 201
E + W +S
Sbjct: 190 PEAVAWIVS 198
>gi|307945710|ref|ZP_07661046.1| lipoprotein [Roseibium sp. TrichSKD4]
gi|307771583|gb|EFO30808.1| lipoprotein [Roseibium sp. TrichSKD4]
Length = 194
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 14/191 (7%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDI 73
+ SL V C + + P +Y L +T E ++ Q+++ P K L++E I
Sbjct: 11 LGASLLVAGCAA-------SGPAALYGLNAATSQVEGRRKSRQVLVPRPRALKALDTEYI 63
Query: 74 -IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
+V P+ Y W+D LP ++Q K++ +N + V P G+ DYQ+ I
Sbjct: 64 AVVNQGPV-YSYYPKVSWADALPSLVQTKVVETLQNTNLLRGVGLPGDGLLIDYQLQLEI 122
Query: 133 RSFEI---NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
RSFEI N D+ A++ ++ K++N + V +VF E + +++LNRA
Sbjct: 123 RSFEIQLANADK--AVVAIAAKLVNDRNGRTVSNRVFRAEIPASATSADKAVEALNRAAD 180
Query: 190 RISSEIIDWTL 200
++ S+I WT+
Sbjct: 181 QVFSDIALWTV 191
>gi|170743044|ref|YP_001771699.1| hypothetical protein M446_4936 [Methylobacterium sp. 4-46]
gi|168197318|gb|ACA19265.1| protein of unknown function DUF330 [Methylobacterium sp. 4-46]
Length = 198
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
+DLT + LI+ EP+ + ++ IIVR + +L G QW D+LPR+I
Sbjct: 34 FDLTALPGAARAGSARRSLIVAEPVGLQPFEADRIIVREPGGSLSFLGGGQWVDRLPRLI 93
Query: 99 QLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDN 158
Q +LI + EN + V +P I AD +++ IR+F+I A++ +S K+++
Sbjct: 94 QARLIQSLENARSLRAVSRPGDKIAADTLLVTEIRAFDIAAGSREAVVDLSAKLVSEATG 153
Query: 159 SLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
S+V +VF + + L+RA S + ++++ W
Sbjct: 154 SVVAARVFAARVPVADLSPGASANGLDRALSLVLADVVRW 193
>gi|296445999|ref|ZP_06887949.1| protein of unknown function DUF330 [Methylosinus trichosporium
OB3b]
gi|296256517|gb|EFH03594.1| protein of unknown function DUF330 [Methylosinus trichosporium
OB3b]
Length = 191
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L + EP + ++S+ I++R+ P + +L +QW D+LPR++Q +LIA F+ K VV
Sbjct: 47 LAVAEPHAIQPVDSDRIVIRTGPNGLAHLAEAQWVDRLPRLVQARLIAAFDRGRKTGFVV 106
Query: 117 KPNQGIYADYQIISA-IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175
+P Q A +I+S IR FEI++ A++ ++ +I++ + ++F E E
Sbjct: 107 RPGQ---AAERILSTDIRRFEIDVSSGEAVVEIAAEILDLRGAATGPGRIFSAEAPAEHS 163
Query: 176 NKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ +L+ A + + +I+ WT + +
Sbjct: 164 TGPAAVHALDEALTSVLRQIVRWTAAQV 191
>gi|194364299|ref|YP_002026909.1| hypothetical protein Smal_0521 [Stenotrophomonas maltophilia
R551-3]
gi|194347103|gb|ACF50226.1| protein of unknown function DUF330 [Stenotrophomonas maltophilia
R551-3]
Length = 213
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 9 IKKKIISCSLAVLL--CTSLSSCFFHNNPVNIYDLTESTKYDES-VQRHIQLIITEPITE 65
+ + +++ S+ LL C+ L S V +Y + K D + Q QL++ +P
Sbjct: 6 LPRLLLATSMLALLGGCSILGSS--EKTAVTLYSPSVQVKADPAWPQASWQLVLAKPSAA 63
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
++++S I VR +P +++ G+ W+ MI+ L+ FE++G+I V + GI AD
Sbjct: 64 RMVDSPRINVRPTPSQLEIYKGASWAQPATDMIEDTLLRGFEDSGRIRGVARSTAGIRAD 123
Query: 126 YQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
Y++ + +R FE + +I ++ K+I+ D +V + F + + +
Sbjct: 124 YKLSTDVRRFESDYQGQATPTVVIEVNAKLIHVADQRVVADRTFRQSQPVGSTDVPAVTA 183
Query: 183 SLNRAFSRISSEIIDWTLSS 202
+ R +++ +++ WTL S
Sbjct: 184 AFERGLQQLAQDVVGWTLQS 203
>gi|188580088|ref|YP_001923533.1| hypothetical protein Mpop_0820 [Methylobacterium populi BJ001]
gi|179343586|gb|ACB78998.1| protein of unknown function DUF330 [Methylobacterium populi BJ001]
Length = 207
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 84/142 (59%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
++++EP+ + + ++ IIVR + +L G QW+D+LPR+IQ ++I + EN G++ +V
Sbjct: 61 IVVSEPVGLQPMEADRIIVREPGGSLSFLGGGQWADRLPRLIQTRVIQSLENTGRLRSVS 120
Query: 117 KPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+P + +DYQ++S IR F+IN A++ +S K+I +V +VF ++K +
Sbjct: 121 RPTDKVPSDYQLVSEIREFDINSGTGEAVVDLSAKLIAEGSGRVVNARVFTARVPVQKVD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
L+ A ++ ++++ W
Sbjct: 181 PQSAAAGLDAALGQVLADLVRW 202
>gi|190572711|ref|YP_001970556.1| hypothetical protein Smlt0659 [Stenotrophomonas maltophilia K279a]
gi|190010633|emb|CAQ44242.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 213
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 98/200 (49%), Gaps = 8/200 (4%)
Query: 9 IKKKIISCSLAVLL--CTSLSSCFFHNNPVNIYDLTESTKYDES-VQRHIQLIITEPITE 65
+ + +++ SL LL C+ L S V +Y K D + Q QL++ +P
Sbjct: 6 LPRLLLAASLVTLLGGCSILGSS--EKTAVTLYSPAVQVKADPAWPQASWQLVLAKPSAA 63
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
++++S I VR +P +++ G+ W+ MI+ L+ FE++G+I V + GI AD
Sbjct: 64 RMVDSPRINVRPTPSQLEIYKGASWAQPATDMIEDTLLRGFEDSGRIHGVARSTAGIRAD 123
Query: 126 YQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
Y++ + +R FE + +I ++ K+I+ D +V + F + + +
Sbjct: 124 YKLSTDVRRFESDYQGQATPTVVIEVNAKLIHVADQRVVADRTFRQAQPVGSTDVPAVTA 183
Query: 183 SLNRAFSRISSEIIDWTLSS 202
+ R +++ +++ WTL S
Sbjct: 184 AFERGLQQLAQDVVGWTLVS 203
>gi|254559578|ref|YP_003066673.1| ABC transporter auxiliary protein [Methylobacterium extorquens DM4]
gi|254266856|emb|CAX22655.1| putative uncharacterized ABC-transporter auxiliary component
[Methylobacterium extorquens DM4]
Length = 207
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 85/142 (59%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
++++EP+ + + ++ IIVR + +L G QW+D+LPR+IQ ++I + EN G++ +V
Sbjct: 61 IVVSEPVGLQPMEADRIIVREPGGSLSFLGGGQWADRLPRLIQTRVIQSLENTGRLRSVS 120
Query: 117 KPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+P+ + +DYQ++S IR F++N A++ +S K+I +V +VF ++K +
Sbjct: 121 RPSDKVPSDYQLVSEIREFDVNSGTGEAVVDLSAKLIGEGTGRVVNARVFTARVPVKKVD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
L+ A ++ ++++ W
Sbjct: 181 PQSAAAGLDAALGQVLADLVRW 202
>gi|325919795|ref|ZP_08181788.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325920776|ref|ZP_08182681.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325921243|ref|ZP_08183103.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325921531|ref|ZP_08183383.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325921654|ref|ZP_08183489.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325922542|ref|ZP_08184302.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325923181|ref|ZP_08184866.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325923305|ref|ZP_08184978.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325924093|ref|ZP_08185660.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325545425|gb|EGD16712.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325546232|gb|EGD17413.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325546326|gb|EGD17495.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325546981|gb|EGD18075.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325547843|gb|EGD18862.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325547979|gb|EGD18981.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325548210|gb|EGD19204.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325548750|gb|EGD19699.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325549709|gb|EGD20570.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
Length = 214
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 94/194 (48%), Gaps = 11/194 (5%)
Query: 18 LAVLLCTSL---SSCFF----HNNPVNIYDLTESTKYDES-VQRHIQLIITEPITEKILN 69
L LLC SL C P IY T + S Q QL + +P ++++
Sbjct: 7 LRPLLCVSLLTLGGCSLLTGGDQKPATIYAPTVRITPNPSWPQVSWQLSVAKPSAARVID 66
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V + GI +DY+++
Sbjct: 67 SPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARIGTGIRSDYKLV 126
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I ++ K+++A D +V + F V + + +
Sbjct: 127 IDLRRFESDYAGQSLPSATIELNAKLLHAADQRVVASRTFLVARPSTGTDTATVAAAFEQ 186
Query: 187 AFSRISSEIIDWTL 200
A +++++E++ WTL
Sbjct: 187 AMTQVTTELVGWTL 200
>gi|254522526|ref|ZP_05134581.1| lipoprotein [Stenotrophomonas sp. SKA14]
gi|219720117|gb|EED38642.1| lipoprotein [Stenotrophomonas sp. SKA14]
Length = 213
Score = 85.9 bits (211), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 99/200 (49%), Gaps = 8/200 (4%)
Query: 9 IKKKIISCSLAVLL--CTSLSSCFFHNNPVNIYDLTESTKYDES-VQRHIQLIITEPITE 65
+ + +++ S+ LL C+ L S V +Y K D + Q QL++ +P
Sbjct: 6 LPRLLLAASMVTLLGGCSILGSS--EKTAVTLYSPAVQVKADPAWPQASWQLVLAKPSAA 63
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
++++S I VR +P +++ G+ W+ MI+ L+ FE++G+I V + + GI AD
Sbjct: 64 RMVDSPRINVRPTPSQMEIYKGASWAQPATDMIEDTLLRGFEDSGRIRGVARSSAGIRAD 123
Query: 126 YQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
Y++ + +R FE + +I ++ K+I+ D +V + F + + +
Sbjct: 124 YKLSTDVRRFESDYQGQATPTVVIEVNAKLIHVADQRVVADRTFRQAQPVGSTDVPAVTA 183
Query: 183 SLNRAFSRISSEIIDWTLSS 202
+ R +++ +++ WTL S
Sbjct: 184 AFERGLQQLAQDVVGWTLVS 203
>gi|118588761|ref|ZP_01546169.1| putative ABC transporter protein [Stappia aggregata IAM 12614]
gi|118438747|gb|EAV45380.1| putative ABC transporter protein [Stappia aggregata IAM 12614]
Length = 201
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 1 MDKKLNKIIKKKIISC-SLAVLL---CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ 56
M K + ++ +++ L VL+ +S S ++ ++ L + +Q
Sbjct: 1 MTKATTDMTRRGVLTALGLGVLVSGCASSTPSAYYSIGAADVGGL-------QGRSSRVQ 53
Query: 57 LIITEPITEKILNSEDI-IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
+++ P K L++ I +V P+ Y S W+D LP ++Q KL+ +N ++ V
Sbjct: 54 VLVAAPRALKALDTSYIAVVDKGPV-YSYFPDSAWADSLPNVVQSKLVETLQNTNRLRGV 112
Query: 116 VKPNQGIYADYQIISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
P G+ DYQ+ + IR+FE+ + + ++ +S +I+N + V KVF E
Sbjct: 113 GLPGDGLLIDYQLQTEIRAFELQLAGANRGVVEISARIVNDRNGQTVANKVFRAETSAGS 172
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTL 200
+ ++++N + R+ +E+ WTL
Sbjct: 173 TSVNKAVEAMNASADRVFAEMAAWTL 198
>gi|260430757|ref|ZP_05784729.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260418198|gb|EEX11456.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 214
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 97/191 (50%), Gaps = 18/191 (9%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIVRSSPIE 81
CT L + + P ++Y LT + + S+ R Q+++ EP ++++ I V+ +P++
Sbjct: 13 CTGLGTLKQASQPNDLYLLTPKSTFSSSLPRVSKQIVVQEPTATAAVDTDQIAVQPTPLQ 72
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE----- 136
+QYL ++W D+ P ++Q L+ +FEN+ +++ V + G+ ADY I+ +R F+
Sbjct: 73 VQYLPRARWVDRAPLIVQALLVESFENSNRVAAVGRSTVGLRADYVIVPDLREFQGIVVG 132
Query: 137 -------INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ ID + +++KII+ ++ ++ F + D + + ++A
Sbjct: 133 ETQDSKTVKID-----VRINIKIIDEFEDKIIASNSFQRDVIAASDQTPDLVAAFDQALG 187
Query: 190 RISSEIIDWTL 200
++W++
Sbjct: 188 STMRNAVEWSI 198
>gi|21230107|ref|NP_636024.1| hypothetical protein XCC0632 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769902|ref|YP_244664.1| hypothetical protein XC_3602 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21111635|gb|AAM39948.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575234|gb|AAY50644.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 214
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 18 LAVLLCTSL---SSCFF----HNNPVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILN 69
L LLC SL C P IY T T Q QL++ +P +I++
Sbjct: 7 LRPLLCVSLLALGGCSVLTGGDQKPATIYAPTVRVTPNPAWPQVSWQLLVAKPSAARIID 66
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V + GI +DY++
Sbjct: 67 SPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARIGAGIRSDYKLA 126
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I ++ K++++ D +V + F V + + +
Sbjct: 127 IDVRRFESDYAGQSLPAATIELNAKLLHSSDQRVVASRTFTVARPSSSTDTAAVAAAFEQ 186
Query: 187 AFSRISSEIIDWTL 200
A +++++E++ WTL
Sbjct: 187 ALTQVTTELVGWTL 200
>gi|218516886|ref|ZP_03513726.1| putative ABC transporter protein [Rhizobium etli 8C-3]
Length = 96
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 108 NNGKISTVVKPNQGIYADYQIISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVF 166
N+GK+ V P QG+ DYQ+++ IRSFEI+ + A++ +S+KI+N + S+ QKVF
Sbjct: 1 NSGKLGGVGLPGQGLAIDYQVVTDIRSFEIDASSGNQAVVEISVKILNDRNGSVRAQKVF 60
Query: 167 HVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
DN F++SL+RAFS + SEI+ WTL S+
Sbjct: 61 RATAPAGGDNA-GFVKSLDRAFSTVVSEIVSWTLRSI 96
>gi|163850327|ref|YP_001638370.1| hypothetical protein Mext_0894 [Methylobacterium extorquens PA1]
gi|163661932|gb|ABY29299.1| protein of unknown function DUF330 [Methylobacterium extorquens
PA1]
Length = 207
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 85/142 (59%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
++++EP+ + + ++ IIVR + +L G QW+D+LPR+IQ ++I + EN G++ +V
Sbjct: 61 IVVSEPVGLQPMEADRIIVREPGGSLSFLGGGQWADRLPRLIQTRVIQSLENTGRLRSVS 120
Query: 117 KPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+P+ + +DYQ++S IR F++N A++ +S K+I +V +VF ++K +
Sbjct: 121 RPSDKVPSDYQLVSEIREFDVNSGTGEAVVDLSAKLIAEGTGRVVNARVFTARVPVKKVD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
L+ A ++ ++++ W
Sbjct: 181 PQSAAAGLDAALGQVLADLVRW 202
>gi|218528884|ref|YP_002419700.1| hypothetical protein Mchl_0854 [Methylobacterium chloromethanicum
CM4]
gi|240137398|ref|YP_002961869.1| putative uncharacterized ABC-transporter auxiliary component
[Methylobacterium extorquens AM1]
gi|218521187|gb|ACK81772.1| protein of unknown function DUF330 [Methylobacterium
chloromethanicum CM4]
gi|240007366|gb|ACS38592.1| putative uncharacterized ABC-transporter auxiliary component
[Methylobacterium extorquens AM1]
Length = 207
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 85/142 (59%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
++++EP+ + + ++ IIVR + +L G QW+D+LPR+IQ ++I + EN G++ +V
Sbjct: 61 IVVSEPVGLQPMEADRIIVREPGGSLSFLGGGQWADRLPRLIQTRVIQSLENTGRLRSVS 120
Query: 117 KPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+P+ + +DYQ++S IR F++N A++ +S K+I +V +VF ++K +
Sbjct: 121 RPSDKVPSDYQLVSEIREFDVNSGTGEAVVDLSAKLIAEGTGRVVNARVFTARVPVKKVD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
L+ A ++ ++++ W
Sbjct: 181 PQSAAAGLDAALGQVLADLVRW 202
>gi|285019446|ref|YP_003377157.1| secreted protein [Xanthomonas albilineans GPE PC73]
gi|283474664|emb|CBA17163.1| putative secreted protein [Xanthomonas albilineans]
Length = 215
Score = 84.7 bits (208), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 77/148 (52%), Gaps = 3/148 (2%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
QL +T+P ++++S I VR +P E+Q G W+ M + L+ FE++G+I V
Sbjct: 51 QLALTKPSATRMIDSPRIAVRPTPDELQVYSGVSWAQPATDMFEDTLLRAFEDSGRIPGV 110
Query: 116 VKPNQGIYADYQIISAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKL 172
+ GI ADY+++ +R FE + H A I ++ K+++ D +V F V +
Sbjct: 111 ARLGTGIGADYKLLLDLRRFESDYAGHDVPAATIELNAKLLHTVDQRVVSSHTFLVTQTA 170
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+ + + +A S++S ++ WTL
Sbjct: 171 GGTTEAQVVDAFGQALSQLSRAVVGWTL 198
>gi|294624130|ref|ZP_06702868.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601575|gb|EFF45574.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 211
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 18 LAVLLCTSL---SSCFF----HNNPVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILN 69
L LLC SL C P IY T T Q QL++ +P ++++
Sbjct: 4 LRPLLCVSLLALGGCSVLTGGDQKPATIYAPTVRVTPKPAWPQVTWQLVVAKPSAARVID 63
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR SP E+Q G+ W+ M++ ++ FE++GKI+ V GI +DY++
Sbjct: 64 SPRINVRPSPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRSDYKLA 123
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I ++ K++++ D +V + F V + + +
Sbjct: 124 IDLRRFESDYAGQSLPSATIELNAKLLHSADQRVVASRTFLVARPSTGTDTAAVAVAFEQ 183
Query: 187 AFSRISSEIIDWTLSS 202
A +++++E++ WTL++
Sbjct: 184 ALTQLTTELVGWTLTT 199
>gi|312115048|ref|YP_004012644.1| hypothetical protein Rvan_2321 [Rhodomicrobium vannielii ATCC
17100]
gi|311220177|gb|ADP71545.1| protein of unknown function DUF330 [Rhodomicrobium vannielii ATCC
17100]
Length = 198
Score = 84.0 bits (206), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 95/199 (47%), Gaps = 13/199 (6%)
Query: 3 KKLNKIIKKKIIS-CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITE 61
+K+ I+ ++ C++ L+ S + F DL E+ + + R IQ+ +
Sbjct: 5 RKIAAIVAAGMLGGCAVGGLVGESAPATF---------DL-EAPQVERMRARGIQITVYP 54
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P+ K +++ +I+V+ + Y G+ W D+LP + Q +L+ N+G V+
Sbjct: 55 PVAVKTIDTVEILVKGGNGRVAYFSGAAWGDRLPALFQARLVETLANSGAFRAVLTNQDR 114
Query: 122 IYADYQIISAIRSFEINIDRHC--AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ D + IR F+++ A++ + +K+++ +S++ K FH +
Sbjct: 115 VTGDLSLAIEIRDFQVDATSGAPEAVVDVYVKLVDERTSSIITTKRFHARVAAAAPDPNA 174
Query: 180 FIQSLNRAFSRISSEIIDW 198
I +LN AF ++++EI W
Sbjct: 175 GIHALNIAFQQVAAEITTW 193
>gi|188993117|ref|YP_001905127.1| Putative secreted protein [Xanthomonas campestris pv. campestris
str. B100]
gi|167734877|emb|CAP53089.1| Putative secreted protein [Xanthomonas campestris pv. campestris]
Length = 214
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 92/194 (47%), Gaps = 11/194 (5%)
Query: 18 LAVLLCTSL---SSCFF----HNNPVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILN 69
L LLC SL C P IY T T Q QL + +P +I++
Sbjct: 7 LRPLLCVSLLALGGCSVLTGGDQKPATIYAPTVRVTPNPAWPQVSWQLSVAKPSAARIID 66
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V + GI +DY++
Sbjct: 67 SPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARIGAGIRSDYKLA 126
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I ++ K++++ D +V + F V + + +
Sbjct: 127 IDVRRFESDYAGQSLPAATIELNAKLLHSSDQRVVASRTFTVARPSSSTDTAAVAAAFEQ 186
Query: 187 AFSRISSEIIDWTL 200
A +++++E++ WTL
Sbjct: 187 AMTQVTTELVGWTL 200
>gi|294663969|ref|ZP_06729389.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292606264|gb|EFF49495.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 211
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 18 LAVLLCTSL---SSCFF----HNNPVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILN 69
L LLC SL C P IY T T Q QL++ +P ++++
Sbjct: 4 LRPLLCVSLLALGGCSVLTGGDQKPATIYAPTVRVTPNPAWPQVTWQLVVAKPSAARVID 63
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR SP E+Q G+ W+ M++ ++ FE++GKI+ V GI +DY++
Sbjct: 64 SPRINVRPSPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRSDYKLA 123
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I ++ K++++ D +V + F V + + +
Sbjct: 124 IDLRRFESDYAGQSLPSATIELNAKLLHSADQRVVASRTFLVARPSTGTDTAAVAVAFEQ 183
Query: 187 AFSRISSEIIDWTLSS 202
A +++++E++ WTL++
Sbjct: 184 ALTQLTTELVGWTLTT 199
>gi|289662619|ref|ZP_06484200.1| putative secreted protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289668436|ref|ZP_06489511.1| putative secreted protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 214
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT-ESTKYDESVQRHIQLIITEPITE 65
++++ + LA+ C+ L+ P IY T T Q QL++ +P
Sbjct: 5 RLLRPMLCVSLLALGGCSVLTGG--DQKPATIYSPTVRVTPNPAWPQVTWQLVVAKPSAA 62
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
+I++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V GI +D
Sbjct: 63 RIIDSPRINVRPTPGELQVYQGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRSD 122
Query: 126 YQIISAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
Y++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 123 YKLAIDLRRFESDYAGQSLPSATIELNAKLLHSADQRVVASRTFLVARPSTGTDTAAVAV 182
Query: 183 SLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 183 AFEQALNQVTTELVGWTLTT 202
>gi|78049254|ref|YP_365429.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78037684|emb|CAJ25429.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 214
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 11/193 (5%)
Query: 21 LLCTSL---SSCFF----HNNPVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILNSED 72
LLC SL C P IY T T Q QL++ +P ++++S
Sbjct: 10 LLCVSLLALGGCSVLAGGDKKPATIYAPTVRVTPNPTWPQVTWQLVVAKPSAARVIDSPR 69
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V GI +DY++ +
Sbjct: 70 INVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRSDYKLAIDL 129
Query: 133 RSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
R FE + A I ++ K++++ D +V + F V + + +A +
Sbjct: 130 RRFESDYAGQSLPSATIELNAKLLHSTDQRVVASRTFLVARPSTGTDTAAVAVAFEQALT 189
Query: 190 RISSEIIDWTLSS 202
+I++E++ WTL++
Sbjct: 190 QITTELVGWTLTA 202
>gi|325928561|ref|ZP_08189749.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas perforans 91-118]
gi|325541100|gb|EGD12654.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas perforans 91-118]
Length = 214
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 100/200 (50%), Gaps = 6/200 (3%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT-ESTKYDESVQRHIQLIITEPITE 65
++++ + + LA+ C+ L+ P IY T T Q QL++ +P
Sbjct: 5 RVLRPLLCASLLALGGCSVLTGG--DQKPATIYAPTVRVTPNPNWPQVTWQLVVAKPSAA 62
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
++++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V GI +D
Sbjct: 63 RVIDSPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRSD 122
Query: 126 YQIISAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
Y++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 123 YKLAIDLRRFESDYAGQSLPSATIELNAKLLHSTDQRVVASRTFLVARLSTGTDTAAVAV 182
Query: 183 SLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 183 AFEQALTQVTTELVGWTLTA 202
>gi|119390266|pdb|2IQI|A Chain A, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390267|pdb|2IQI|B Chain B, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390268|pdb|2IQI|C Chain C, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390269|pdb|2IQI|D Chain D, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390270|pdb|2IQI|E Chain E, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390271|pdb|2IQI|F Chain F, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390272|pdb|2IQI|G Chain G, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390273|pdb|2IQI|H Chain H, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
Length = 192
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 33 NNPVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWS 91
P IY T T Q QL++ +P +I++S I VR +P E+Q G+ W+
Sbjct: 7 QKPATIYAPTVRVTPNPAWPQVSWQLLVAKPSAARIIDSPRINVRPTPGELQVYHGAGWA 66
Query: 92 DKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH---CAIITM 148
M++ ++ FE++GKI+ V + GI +DY++ +R FE + A I +
Sbjct: 67 QPATDMLEDSVVRAFEDSGKIAAVARIGAGIRSDYKLAIDVRRFESDYAGQSLPAATIEL 126
Query: 149 SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+ K++++ D +V + F V + + +A +++++E++ WTL
Sbjct: 127 NAKLLHSSDQRVVASRTFTVARPSSSTDTAAVAAAFEQALTQVTTELVGWTL 178
>gi|330501343|ref|YP_004378212.1| hypothetical protein MDS_0429 [Pseudomonas mendocina NK-01]
gi|328915629|gb|AEB56460.1| hypothetical protein MDS_0429 [Pseudomonas mendocina NK-01]
Length = 199
Score = 82.0 bits (201), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 93/176 (52%), Gaps = 2/176 (1%)
Query: 28 SCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIG 87
S + P++IY L +T ++ + L + P++ ++L+ I+V P + G
Sbjct: 17 SILPQSEPLDIYLLPATTLPAQTQRVDWSLRVNSPVSNQLLDGTRIVVLPEPGRVNTYQG 76
Query: 88 SQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF--EINIDRHCAI 145
+WS++ P++++ +L+ F+++G+I + +Q + AD +++S +RSF E A+
Sbjct: 77 VRWSERTPQLLRARLLDAFQDDGRIQALSNEDQRLQADLELVSDLRSFHSEYRDGIPSAL 136
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
I + + +++ ++ + F V + + + + +A ++S E++DWTL+
Sbjct: 137 IRLEVNLVDTRSQKIIASRRFSVSQAAGDTSITAVVTAFGKAADQLSRELVDWTLA 192
>gi|166713442|ref|ZP_02244649.1| hypothetical protein Xoryp_18885 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 214
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 18 LAVLLCTSL---SSCFF----HNNPVNIYDLTESTKYDES-VQRHIQLIITEPITEKILN 69
L LLC SL C P IY T + + Q QL++ +P +I++
Sbjct: 7 LRPLLCVSLLALGGCSVLTGGDQKPATIYSPTVRVSPNPAWPQVAWQLVVAKPSAARIID 66
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR +P E+Q G W+ M++ ++ FE++GKI+ V GI +DY++
Sbjct: 67 SPRINVRPTPGELQVYQGVGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRSDYKLA 126
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I ++ K++++ D +V + F V + +
Sbjct: 127 IDLRRFESDYAGQPLPSATIELNAKLLHSSDQRVVASRTFLVARPSTSTETAAVAVAFEQ 186
Query: 187 AFSRISSEIIDWTLSS 202
A +++++E++ WTL++
Sbjct: 187 ALTQVTTELVGWTLTT 202
>gi|325915747|ref|ZP_08178049.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas vesicatoria ATCC 35937]
gi|325538011|gb|EGD09705.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas vesicatoria ATCC 35937]
Length = 214
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 18 LAVLLCTSL---SSCFFHNN----PVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILN 69
L LLC SL C P IY T T Q QL + +P +I++
Sbjct: 7 LRPLLCVSLLALGGCSVLTGGDKKPATIYAPTVRVTPNPTWPQVTWQLAVAKPSAARIID 66
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V + GI +DY++
Sbjct: 67 SPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARIGAGIRSDYKLA 126
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I ++ K++++ D + + F V + + +
Sbjct: 127 IDVRRFEADYAGQSVPSATIELNAKLLHSSDQRVAASRTFLVARPSTSTDIAAVAAAFEQ 186
Query: 187 AFSRISSEIIDWTLSS 202
A +++++E++ WTL++
Sbjct: 187 ALTQVTTELVGWTLTT 202
>gi|21244298|ref|NP_643880.1| hypothetical protein XAC3573 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109948|gb|AAM38416.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 211
Score = 81.3 bits (199), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%), Gaps = 6/184 (3%)
Query: 23 CTSLSSCFFHNNPVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE 81
C+ L+ P IY T T Q QL++ +P ++++S I VR +P E
Sbjct: 18 CSVLTGG--DQKPATIYAPTVRMTPNPAWPQVTWQLVVAKPSAARVIDSPRINVRPTPGE 75
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
+Q G+ W+ M++ ++ FE++GKI+ V GI +DY++ +R FE +
Sbjct: 76 LQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRSDYKLAIDLRRFESDYAG 135
Query: 142 H---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
A I ++ K++++ D +V + F V + + +A +++++E++ W
Sbjct: 136 QSLPSATIELNAKLLHSADQRVVASRTFLVARPSTGTDTAAVAMAFEQALTQLTTELVGW 195
Query: 199 TLSS 202
TL++
Sbjct: 196 TLTT 199
>gi|188578637|ref|YP_001915566.1| lipoprotein, putative [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188523089|gb|ACD61034.1| lipoprotein, putative [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 211
Score = 80.9 bits (198), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 18 LAVLLCTSL---SSCFF----HNNPVNIYDLTESTKYDES-VQRHIQLIITEPITEKILN 69
L LLC SL C P IY T + + Q QL++ +P +I++
Sbjct: 4 LRPLLCVSLLALGGCSVLTGGDQKPATIYSPTVRVSPNPAWPQVAWQLVVAKPSAARIID 63
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR +P E+Q G W+ M++ ++ FE++GKI+ V GI +DY++
Sbjct: 64 SPRINVRPTPGELQVYQGVGWAQPATDMLEDNVVRAFEDSGKIAAVAHIGTGIRSDYKLA 123
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I + K++++ D +V + F V + + +
Sbjct: 124 IDLRRFESDYASQSLPSATIEFNAKLLHSTDQRVVASRTFLVARPSTSTDTAAVAVAFEQ 183
Query: 187 AFSRISSEIIDWTLSS 202
A +++++E++ WTL++
Sbjct: 184 ALTQVTTELVGWTLTT 199
>gi|58580426|ref|YP_199442.1| hypothetical protein XOO0803 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622388|ref|YP_449760.1| hypothetical protein XOO_0731 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|58425020|gb|AAW74057.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366328|dbj|BAE67486.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 214
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 93/196 (47%), Gaps = 11/196 (5%)
Query: 18 LAVLLCTSL---SSCFF----HNNPVNIYDLTESTKYDES-VQRHIQLIITEPITEKILN 69
L LLC SL C P IY T + + Q QL++ +P +I++
Sbjct: 7 LRPLLCVSLLALGGCSVLTGGDQKPATIYSPTVRVSPNPAWPQVAWQLVVAKPSAARIID 66
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I VR +P E+Q G W+ M++ ++ FE++GKI+ V GI +DY++
Sbjct: 67 SPRINVRPTPGELQVYQGVGWAQPATDMLEDNVVRAFEDSGKIAAVAHIGTGIRSDYKLA 126
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+R FE + A I + K++++ D +V + F V + + +
Sbjct: 127 IDLRRFESDYASQSLPSATIEFNAKLLHSTDQRVVASRTFLVARPSTSTDTAAVAVAFEQ 186
Query: 187 AFSRISSEIIDWTLSS 202
A +++++E++ WTL++
Sbjct: 187 ALTQVTTELVGWTLTT 202
>gi|92117462|ref|YP_577191.1| hypothetical protein Nham_1923 [Nitrobacter hamburgensis X14]
gi|91800356|gb|ABE62731.1| Mammalian cell entry related protein [Nitrobacter hamburgensis X14]
Length = 369
Score = 80.5 bits (197), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
Query: 39 YDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
YDL + + +R ++ L+I EP L+++ + S E + W+D +P+
Sbjct: 204 YDLRAAHGFSSPPERTLKSKLVIPEPTAVIKLDTQRFLF-SPAKEYPGFAEAIWADSIPK 262
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI-ITMSLKIINA 155
++Q KL+ +FEN ++ G+ DYQ++ IR F+I D A+ I +S +I+N
Sbjct: 263 LLQAKLLESFENYDIAHAPLRSMDGVQGDYQLLIDIRRFQIATDPEPAVDIGLSARILN- 321
Query: 156 HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
D +V ++F +KL+K + N AF RI+ ++I WT+ ++
Sbjct: 322 KDGKVVAARLFQDTQKLDKIEPAAASAAFNDAFGRIAKDMIAWTVKAI 369
>gi|254501713|ref|ZP_05113864.1| hypothetical protein SADFL11_1751 [Labrenzia alexandrii DFL-11]
gi|222437784|gb|EEE44463.1| hypothetical protein SADFL11_1751 [Labrenzia alexandrii DFL-11]
Length = 165
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 83/152 (54%), Gaps = 3/152 (1%)
Query: 54 HIQLIITEPITEKILNSEDI-IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKI 112
+Q+++ P K L++ I +V S P+ Y W+D LP ++Q KL+ +N G++
Sbjct: 15 RVQVLVAPPRALKALDTTYIAVVDSGPV-YSYFPNVAWADTLPNVVQNKLLQTLQNTGRL 73
Query: 113 STVVKPNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEK 171
V P G+ DYQ+ + IR+FE+NI+ + ++ ++ +++N + V VF E
Sbjct: 74 RGVGLPGDGLLIDYQLQTDIRAFELNIEGANRGVVEIAARVVNDRNGRTVANNVFRRETP 133
Query: 172 LEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ ++++N++ ++ ++I WTL ++
Sbjct: 134 SGSSDVEKAVEAMNQSAEQVFADIAAWTLRNV 165
>gi|146305410|ref|YP_001185875.1| hypothetical protein Pmen_0370 [Pseudomonas mendocina ymp]
gi|145573611|gb|ABP83143.1| protein of unknown function DUF330 [Pseudomonas mendocina ymp]
Length = 199
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 92/175 (52%), Gaps = 2/175 (1%)
Query: 28 SCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIG 87
S + P++IY L + +S + L I P + ++L+ I+V P + G
Sbjct: 17 SILPQSEPLDIYLLPAAQLPAQSQRVDWALRINSPSSSQLLDGTRIVVLPEPDRVNTYQG 76
Query: 88 SQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF--EINIDRHCAI 145
+WS++ P++++ +L+ F+++G+I + Q + AD +++S +RSF E A+
Sbjct: 77 VRWSERTPQLLRNRLLDAFQDDGRIQALSNEEQRLQADLELVSDLRSFHSEYRDGIPYAL 136
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
I + + +++A D ++ + F + ++ + I + +A ++S E++DWTL
Sbjct: 137 IRLEVNLVDARDQRILASRRFSISQQASDTSVPAVIAAFGQAGDQLSRELVDWTL 191
>gi|254453840|ref|ZP_05067277.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198268246|gb|EDY92516.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 215
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 92/187 (49%), Gaps = 6/187 (3%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYD--ESVQRHIQLIITEPITEKILNSEDIIVRSSPI 80
C++L + P+++YDL + + Q +++ P T +LN++ I++R +
Sbjct: 22 CSALGALGDVTTPLSVYDLRAPSGAPVIQGGQLAQDVVVEIPTTSGVLNTDRIMIRPDTL 81
Query: 81 EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF--EIN 138
+ QYL +W D++P M+Q ++ + EN + V + DY I++ + F E+
Sbjct: 82 QAQYLPDVRWGDEVPVMMQTLMLRSLENTNGLRYVGRRPLAGSGDYAIVTELVDFQAELT 141
Query: 139 IDRHCAIIT--MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
D A ++ M+ +++ D S+V + F ++ + + + +RA + +
Sbjct: 142 PDGTGATVSIRMTSRLVRERDASIVASRTFRSQQAAASTDTSAIVVAFDRASDALLVDFA 201
Query: 197 DWTLSSL 203
DWT+++L
Sbjct: 202 DWTITAL 208
>gi|15837901|ref|NP_298589.1| hypothetical protein XF1300 [Xylella fastidiosa 9a5c]
gi|9106291|gb|AAF84109.1|AE003963_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 213
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
Query: 18 LAVLLCTSLSSCFF-HNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIV 75
L+VL S SS P IY D S R L + P +++++ I V
Sbjct: 10 LSVLTLASCSSTLLGEKKPTTIYSPQIHVTTDPSWPRVTWHLTVLHPKAPRMIDTPRINV 69
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ +P EIQ W+ M++ LI FE++GKI+ V + GI DY + +R F
Sbjct: 70 QPTPGEIQVYRNVSWAQPTTDMLEDALIRVFEDSGKIAGVTRAGTGIRTDYSLSLDLRRF 129
Query: 136 E---INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
E A I ++ K+I AH+ L+ + F V + + + +A ++++
Sbjct: 130 ESDYAGTPMPTATIEVNAKLIGAHNKRLIASRTFIVTQPATNTDTSTVANAFGQALTQLT 189
Query: 193 SEIIDWTLS 201
+E++ WTL+
Sbjct: 190 NELVGWTLT 198
>gi|71901852|ref|ZP_00683915.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71728380|gb|EAO30548.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 213
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 5/189 (2%)
Query: 18 LAVLLCTSLSSCFF-HNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIV 75
L+VL S SS P IY D S R L I P +++++ I V
Sbjct: 10 LSVLTLASCSSTLLGEKKPTTIYSPQIHVTTDPSWPRVTWHLTILHPKAPRMIDTPRINV 69
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ +P EIQ W+ M++ LI FE++GKI+ V + GI DY + +R F
Sbjct: 70 QPTPGEIQVYHNVSWAQPTTDMLEDALIRVFEDSGKIAGVTRAGTGIRTDYSLSLDLRRF 129
Query: 136 E---INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
E A I ++ K+I+AH+ L+ + F V + + + +A ++++
Sbjct: 130 ESDYAGTPMPTATIEVNAKLISAHNKRLIASRTFIVTQPATNTDTSTVANAFGQALTQLT 189
Query: 193 SEIIDWTLS 201
+E++ WTL+
Sbjct: 190 NELVGWTLT 198
>gi|28198461|ref|NP_778775.1| hypothetical protein PD0551 [Xylella fastidiosa Temecula1]
gi|182681134|ref|YP_001829294.1| putative secreted protein [Xylella fastidiosa M23]
gi|28056545|gb|AAO28424.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182631244|gb|ACB92020.1| putative secreted protein [Xylella fastidiosa M23]
gi|307579582|gb|ADN63551.1| putative secreted protein [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 213
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
Query: 18 LAVLLCTSLSSCFF-HNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIV 75
L+VL S SS P IY D S R L + P +++++ I V
Sbjct: 10 LSVLTLASCSSTLLGEKKPTTIYSPQIHVTTDPSWPRVTWHLTVLHPKAPRMIDTPRINV 69
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ +P EIQ W+ M++ LI FE++GKI+ V + GI DY + +R F
Sbjct: 70 QPTPGEIQVYHNVSWAQPTTDMLEDALIRVFEDSGKIAGVTRAGTGIRTDYSLSLDLRRF 129
Query: 136 E---INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
E A I ++ K+I AH+ L+ + F V + + + +A ++++
Sbjct: 130 ESDYAGTPMPTATIEVNAKLIGAHNKRLIASRTFIVTQPATNTDTSTVANAFGQALTQLT 189
Query: 193 SEIIDWTLS 201
+E++ WTL+
Sbjct: 190 NELVGWTLT 198
>gi|71274910|ref|ZP_00651198.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71898798|ref|ZP_00680966.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|170729826|ref|YP_001775259.1| hypothetical protein Xfasm12_0625 [Xylella fastidiosa M12]
gi|71164642|gb|EAO14356.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71731384|gb|EAO33447.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|167964619|gb|ACA11629.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 213
Score = 79.0 bits (193), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 87/189 (46%), Gaps = 5/189 (2%)
Query: 18 LAVLLCTSLSSCFF-HNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIV 75
L+VL S SS P IY D S R L + P +++++ I V
Sbjct: 10 LSVLTLASCSSTLLGEKKPTTIYSPQIHVTTDPSWPRVTWHLTVLHPKAPRMIDTPRINV 69
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ +P EIQ W+ M++ LI FE++GKI+ V + GI DY + +R F
Sbjct: 70 QPTPGEIQVYHNVSWAQPTTDMLEDALIRVFEDSGKIAGVTRAGTGIRTDYSLSLDLRRF 129
Query: 136 E---INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
E A I ++ K+I AH+ L+ + F V + + + +A ++++
Sbjct: 130 ESDYAGTPMPTATIEVNAKLIGAHNKRLIASRTFIVTQPATNTDTSTVANAFGQALTQLT 189
Query: 193 SEIIDWTLS 201
+E++ WTL+
Sbjct: 190 NELVGWTLT 198
>gi|254486952|ref|ZP_05100157.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214043821|gb|EEB84459.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 205
Score = 79.0 bits (193), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 86/181 (47%), Gaps = 3/181 (1%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
C+++S+ P++ +DL + + L++ P + S+ I+V+ P I
Sbjct: 22 CSAVSALNSAAIPLDTFDLLPAAGTTTGRRTSHSLLVALPQAPAAIASDRIVVKPDPASI 81
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--- 139
YL G++WSD+ P ++Q LI + + G+I V + G D ++ + +FE+NI
Sbjct: 82 TYLPGARWSDEAPVLLQSLLIRSIASTGRIGYVGRSEGGPVPDTALLVRMDAFEVNITPD 141
Query: 140 DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
A++ ++L ++N + +++ + F + D + + A + + + DW
Sbjct: 142 GTMLAVVDIALTVLNDSNQNVIANRSFSQSAAADSDAPGAVVAAFQAALNGLLPAMADWA 201
Query: 200 L 200
+
Sbjct: 202 M 202
>gi|304319770|ref|YP_003853413.1| lipoprotein, hypothetical [Parvularcula bermudensis HTCC2503]
gi|303298673|gb|ADM08272.1| lipoprotein, hypothetical [Parvularcula bermudensis HTCC2503]
Length = 215
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 85/147 (57%), Gaps = 4/147 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L+I +P E +LN+ ++ V+++P + +YL GS+W+D++P + + L FEN G ++ V
Sbjct: 55 LVIADPDAEAVLNTFNVAVKTAPYQFEYLDGSEWTDRVPVLFRTYLERRFENVGALTAVG 114
Query: 117 -KPNQGIYADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLE 173
+ + + AD+++ + +R+F ++ + A ++ ++++A +L G ++ +E
Sbjct: 115 DRSDLPVGADFELKTDLRAFYLDRTVSPEAARLSFGARLVDAQGGTL-GTRIIDRTIPIE 173
Query: 174 KDNKLHFIQSLNRAFSRISSEIIDWTL 200
+ +++LNR S ++I W+L
Sbjct: 174 GRGREGAVEALNRVAIDASDDVISWSL 200
>gi|163744192|ref|ZP_02151552.1| hypothetical protein OIHEL45_01375 [Oceanibulbus indolifex HEL-45]
gi|161381010|gb|EDQ05419.1| hypothetical protein OIHEL45_01375 [Oceanibulbus indolifex HEL-45]
Length = 206
Score = 78.2 bits (191), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 83/181 (45%), Gaps = 3/181 (1%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
C++LS+ PV+ YDL + + + +L+I P L S+ I+VRS I
Sbjct: 23 CSALSALNTAAQPVDTYDLRPAPGSQKGPRSAAKLLIARPEASAALASDRIMVRSDGATI 82
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
YL ++W D+ P ++Q L+ + +G+I V G D ++ + SFE+ I+
Sbjct: 83 TYLPDARWVDEAPIVLQGLLVRSIAASGRIGYVGPSEGGPVPDKALLVRMDSFEVTIEPG 142
Query: 143 CAIITM---SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
++ M +L ++N D ++G + F + D+ + + + + DW
Sbjct: 143 GTVLVMVDLALTVLNDSDQRVLGIRNFAQSAQAGNDSPSAIAAAFQASLDVLLPDAADWV 202
Query: 200 L 200
L
Sbjct: 203 L 203
>gi|299132340|ref|ZP_07025535.1| protein of unknown function DUF330 [Afipia sp. 1NLS2]
gi|298592477|gb|EFI52677.1| protein of unknown function DUF330 [Afipia sp. 1NLS2]
Length = 370
Score = 78.2 bits (191), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 91/169 (53%), Gaps = 3/169 (1%)
Query: 37 NIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ-YLIGSQWSDKLP 95
+IYDL Y +QL I EP L+++ +++ + ++ +QW+D +P
Sbjct: 202 HIYDLEAVQTYVARSPLALQLAIPEPTVILALDTQRLVITPESENLDPSIVQAQWADSIP 261
Query: 96 RMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIIN 154
+++Q +LI +F N + ++P +G+ D ++S I+ F++++ + A +++++KI+
Sbjct: 262 KLVQARLIESFANYSEERAPIRPTEGVQVDATLLSEIQRFQVDMTSNPTAEVSLAVKIVG 321
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+V ++F + + + + +LN AFS ++ +I+ WT +L
Sbjct: 322 -KSGKIVASRIFRASQPVAHLDAKTVVSALNWAFSDVTKQIVTWTAGNL 369
>gi|85714926|ref|ZP_01045911.1| ABC transporter substrate-binding protein [Nitrobacter sp. Nb-311A]
gi|85698123|gb|EAQ35995.1| ABC transporter substrate-binding protein [Nitrobacter sp. Nb-311A]
Length = 236
Score = 77.4 bits (189), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 85/168 (50%), Gaps = 5/168 (2%)
Query: 39 YDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
YDL ++ + R ++ L I EP L+++ + S E + W+D +P
Sbjct: 71 YDLRAASGFPNPPDRPLKKSLAIPEPTAVIKLDTQRFLF-SPAKEYPDFAEAMWADSIPN 129
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINA 155
++Q KL+ +FEN ++ G+ ADYQ++ IR F+I D A I +S +I+N
Sbjct: 130 LLQAKLLESFENYDIAHAPLRSMDGVKADYQLLIDIRRFQITTDPEPVADIGLSARILN- 188
Query: 156 HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ +V ++F KL+K + N AF RI+ ++I WT+ +L
Sbjct: 189 KNGKVVAARLFQDARKLDKIEPGAASAAFNDAFERIAKDMIAWTVKAL 236
>gi|152984731|ref|YP_001347293.1| putative lipoprotein [Pseudomonas aeruginosa PA7]
gi|150959889|gb|ABR81914.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
Length = 214
Score = 76.6 bits (187), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 92/198 (46%), Gaps = 4/198 (2%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI--QLIITEPIT 64
+ +++ ++ L V S + +Y L +V R + L I P T
Sbjct: 6 RPLRRLSLAAGLVVFATLGACSILPEAQVLQVYLLPVHNPPASAVARPVDWSLRIARPRT 65
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+L S I VR EI G++WSD P +++ +L+ F+ +G++ + + + A
Sbjct: 66 SLVLESPRIAVRPQGDEISVYQGARWSDPAPALLRDRLMQAFQADGRVRGLSSDDSNLQA 125
Query: 125 DYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
D+++ +R+F+ + A+I +++ + D ++ + F V + ++ +
Sbjct: 126 DFELGGDLRAFQTEYPNGQATALIRYDARLVRSDDKRVIASRRFEVRQPVDGRKVPEVVS 185
Query: 183 SLNRAFSRISSEIIDWTL 200
+ +A +S++++DWTL
Sbjct: 186 AFGKAADTLSAQVLDWTL 203
>gi|84516865|ref|ZP_01004223.1| hypothetical protein SKA53_06797 [Loktanella vestfoldensis SKA53]
gi|84509333|gb|EAQ05792.1| hypothetical protein SKA53_06797 [Loktanella vestfoldensis SKA53]
Length = 189
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/186 (22%), Positives = 83/186 (44%), Gaps = 3/186 (1%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
+A+ C+++S+ ++ YDL + Q L++ P ++++ I+VR
Sbjct: 1 MALGGCSAVSALNAAGTALDTYDLIPPSGGTTGRQTRRTLLVALPDATAAISTDRILVRP 60
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
I YL +W+ +LPR++Q L+ G+I V G D +++ + +F++
Sbjct: 61 DAAAITYLPDGRWTSELPRVVQSLLVRAISGTGRIGYVGPAEGGPVPDSALLTRVDAFDV 120
Query: 138 NI--DR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
I DR A I ++L ++N D ++G + F + D+ + +
Sbjct: 121 TIGADRMPVAAIDITLTVLNDRDQRVIGSRRFSQSVPVAGDSPAAIVAGFQALVDALLPA 180
Query: 195 IIDWTL 200
+ DW L
Sbjct: 181 MADWVL 186
>gi|209885949|ref|YP_002289806.1| putative ABC transporter [Oligotropha carboxidovorans OM5]
gi|209874145|gb|ACI93941.1| putative ABC transporter [Oligotropha carboxidovorans OM5]
Length = 371
Score = 75.9 bits (185), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 88/170 (51%), Gaps = 4/170 (2%)
Query: 37 NIYDLTESTKYDES-VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIG-SQWSDKL 94
++YDL+ Y + +QL I EP L+++ +IV + I +QW+D +
Sbjct: 202 HVYDLSAVQTYAATRTPLTLQLAIPEPTVILALDTQRLIVTPEGDALDASIAQAQWADSI 261
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI-DRHCAIITMSLKII 153
P+++Q +L+ +FEN + V+P G+ D ++S IR F ++ A I++S+K++
Sbjct: 262 PKLVQARLLESFENYSEEKAPVRPTDGVQTDATLLSEIRRFGVDTSGSPTAEISLSVKLV 321
Query: 154 NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
A +V ++F + + + + +++RAF+ + +I+ W L
Sbjct: 322 -AKSGQIVASRIFRSNQPVAHLDAKTAVSAIDRAFTDTAKQIVTWAADKL 370
>gi|115523757|ref|YP_780668.1| hypothetical protein RPE_1739 [Rhodopseudomonas palustris BisA53]
gi|115517704|gb|ABJ05688.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris BisA53]
Length = 384
Score = 75.5 bits (184), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 89/166 (53%), Gaps = 2/166 (1%)
Query: 38 IYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRM 97
IYDL T + QL I EP +L+++ I+ ++ L G QWSD +P+M
Sbjct: 203 IYDLATPTDFTPGKPIRGQLAIAEPSAVVMLDTQRILTAPG-LDFPQLAGVQWSDSIPKM 261
Query: 98 IQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHD 157
+Q KLI +FEN +K N + AD+Q+ + FEI D A I ++ K+++ D
Sbjct: 262 LQAKLIQSFENYDIAHAPIKANDMVSADHQLAIDLHGFEIAGDPPQAAIALAAKLLD-KD 320
Query: 158 NSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
++ K+F V L+K L + + N AFS ++ +++ WT+++L
Sbjct: 321 GKVMTAKLFRVNRPLDKVEPLAALAAFNAAFSELAKDLVGWTVAAL 366
>gi|313108531|ref|ZP_07794532.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa 39016]
gi|310881034|gb|EFQ39628.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa 39016]
Length = 210
Score = 74.7 bits (182), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I P T +L S I VR EI G++WSD P +++ +L+ F+ +G++ +
Sbjct: 54 LRIARPRTSLVLESPRIAVRPHGDEISVYQGARWSDPAPSLLRDRLMQAFQADGRVRGLS 113
Query: 117 KPNQGIYADYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD+++ +R+F+ + A+I +++ D +V + F V + ++
Sbjct: 114 SDDSNLQADFELGGDLRAFQTEYPNGQASALIRYDARLVRTDDKRVVASRRFEVSQPVDG 173
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTL 200
+ + +A +S++++DWTL
Sbjct: 174 KKVAAVVSAFGKAGDTLSAQVLDWTL 199
>gi|15598410|ref|NP_251904.1| hypothetical protein PA3214 [Pseudomonas aeruginosa PAO1]
gi|107102744|ref|ZP_01366662.1| hypothetical protein PaerPA_01003811 [Pseudomonas aeruginosa PACS2]
gi|116051204|ref|YP_789965.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218890593|ref|YP_002439457.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa LESB58]
gi|254236176|ref|ZP_04929499.1| hypothetical protein PACG_02141 [Pseudomonas aeruginosa C3719]
gi|254241902|ref|ZP_04935224.1| hypothetical protein PA2G_02623 [Pseudomonas aeruginosa 2192]
gi|296388299|ref|ZP_06877774.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa PAb1]
gi|9949334|gb|AAG06602.1|AE004744_17 hypothetical protein PA3214 [Pseudomonas aeruginosa PAO1]
gi|115586425|gb|ABJ12440.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126168107|gb|EAZ53618.1| hypothetical protein PACG_02141 [Pseudomonas aeruginosa C3719]
gi|126195280|gb|EAZ59343.1| hypothetical protein PA2G_02623 [Pseudomonas aeruginosa 2192]
gi|218770816|emb|CAW26581.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa LESB58]
Length = 214
Score = 74.3 bits (181), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I P T +L S I VR EI G++WSD P +++ +L+ F+ +G++ +
Sbjct: 58 LRIARPRTSLVLESPRIAVRPHGDEISVYQGARWSDPAPSLLRDRLMQAFQADGRVRGLS 117
Query: 117 KPNQGIYADYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD+++ +R+F+ + A+I +++ D +V + F V + ++
Sbjct: 118 SDDSNLQADFELGGDLRAFQTEYPNGQASALIRYDARLVRTDDKRVVASRRFEVSQPVDG 177
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTL 200
+ + +A +S++++DWTL
Sbjct: 178 KKVAAVVSAFGKAGDTLSAQVLDWTL 203
>gi|49079164|gb|AAT49861.1| PA3214 [synthetic construct]
Length = 215
Score = 74.3 bits (181), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 74/146 (50%), Gaps = 2/146 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I P T +L S I VR EI G++WSD P +++ +L+ F+ +G++ +
Sbjct: 58 LRIARPRTSLVLESPRIAVRPHGDEISVYQGARWSDPAPSLLRDRLMQAFQADGRVRGLS 117
Query: 117 KPNQGIYADYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD+++ +R+F+ + A+I +++ D +V + F V + ++
Sbjct: 118 SDDSNLQADFELGGDLRAFQTEYPNGQASALIRYDARLVRTDDKRVVASRRFEVSQPVDG 177
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTL 200
+ + +A +S++++DWTL
Sbjct: 178 KKVAAVVSAFGKAGDTLSAQVLDWTL 203
>gi|146277756|ref|YP_001167915.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555997|gb|ABP70610.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Rhodobacter sphaeroides ATCC 17025]
Length = 201
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/198 (19%), Positives = 87/198 (43%), Gaps = 7/198 (3%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
+ + + ++ +L + C +++S + ++ Y L+ RH+ + EP+T
Sbjct: 1 MRALTRSTLLVATLMLAGCGAVTSLSRASEQLDTYTLSPLPGPGGGGARHV---VVEPVT 57
Query: 65 EK-ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
L+++ I+++ S ++ QYL ++WSD P ++Q L+ + +N G V + G+
Sbjct: 58 AGGALSTDRILIKPSRVQAQYLPDARWSDPAPALVQTLLVGSLQNAGGFRLVAREAAGLI 117
Query: 124 ADYQIISAIRSFEINIDRHCAI---ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
DY +++ +R F+ + M L +I D S+ + D
Sbjct: 118 PDYTLMTELRDFQAEAPPGATPVVRVAMVLTLIRESDRSVASSRRVEAVAPAASDTTGDV 177
Query: 181 IQSLNRAFSRISSEIIDW 198
+ + A ++ + I W
Sbjct: 178 VVAFEAAVTQALGQAIGW 195
>gi|288962792|ref|YP_003453086.1| hypothetical protein AZL_e01970 [Azospirillum sp. B510]
gi|288915058|dbj|BAI76542.1| hypothetical protein AZL_e01970 [Azospirillum sp. B510]
Length = 213
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/185 (20%), Positives = 84/185 (45%), Gaps = 11/185 (5%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
C++L+ H +Y LT + QL++ P +++ I + +P +
Sbjct: 26 CSTLNPTAPH-----LYTLTPRAGVAPGPKADWQLLVETPAAAAGIDTPRIALARTPTSL 80
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
Y W+D+ P M+Q ++ FE++G+I +V + G+ +DY + S +R F+
Sbjct: 81 DYFADVSWADRAPNMVQGLVVQTFEDSGRIVSVGRDTVGLRSDYVLKSELRDFQAEYSTP 140
Query: 143 CAI------ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
A + +S K++ S+ + F + + + + + A +++ +++
Sbjct: 141 GAAMPDRVHVRLSAKLVAMPRRSIEAGETFEASVPVRGRSFTDVVAAFDEALGKVTGDLV 200
Query: 197 DWTLS 201
+W+LS
Sbjct: 201 NWSLS 205
>gi|114570551|ref|YP_757231.1| hypothetical protein Mmar10_2001 [Maricaulis maris MCS10]
gi|114341013|gb|ABI66293.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 209
Score = 73.6 bits (179), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 92/200 (46%), Gaps = 9/200 (4%)
Query: 6 NKIIKKKIISCS-LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
++ ++ ++ S L+V C SL + PV++Y L+ + + + I P
Sbjct: 4 SRYLRAALVGVSALSVSACVSL---LPESEPVSVYRLSSPEPVELQGESWTVIEIDVPNA 60
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+ L+ + I + + Y+ G++W PR++Q L+ +F +G ++ + GI A
Sbjct: 61 PRGLSGDQIAIMQDGSSLAYIQGARWISPTPRLLQSLLVESFNAHGGRLAPIRSDDGIRA 120
Query: 125 DYQIISAIRSFEINIDRHCAI-----ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
DY++ ++ FE DR I + +S++++ H G +V E + +
Sbjct: 121 DYELRLDMQEFEAVYDRGADIAPLVRVRISVRLVAEHGRRFAGARVVTAEVRASANRTSA 180
Query: 180 FIQSLNRAFSRISSEIIDWT 199
+ + ++A S EI DWT
Sbjct: 181 IVAAFDQASQTASREIADWT 200
>gi|226942631|ref|YP_002797704.1| hypothetical protein Avin_04750 [Azotobacter vinelandii DJ]
gi|226717558|gb|ACO76729.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 205
Score = 72.0 bits (175), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 89/186 (47%), Gaps = 6/186 (3%)
Query: 22 LCTSLSSC--FFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDIIVRS 77
L SL++C P++IY L + + + L I P +++L S I V
Sbjct: 11 LLGSLTACSVLPEAEPIHIYRLPGTPLQAQPATARLDQALRIATPKADRMLGSARIAVMP 70
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
I G++WSD P +++ +LI F +G+ ++V + +YAD +++ +RSF
Sbjct: 71 EGNRISNYQGARWSDDAPTLLRDRLIEAFREDGRTASVSSDDNHLYADLELLGDLRSFHS 130
Query: 138 N-IDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+D + + + + ++++ ++ + F V + + + + A R+S ++
Sbjct: 131 EYVDGQPQVRLGLDVSLVHSASQRILASRRFEVRQSVSDGRLDSVVAAFGAASDRLSRQL 190
Query: 196 IDWTLS 201
+DWTL+
Sbjct: 191 VDWTLA 196
>gi|154252957|ref|YP_001413781.1| ABC transporter auxiliary component-like protein [Parvibaculum
lavamentivorans DS-1]
gi|154156907|gb|ABS64124.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Parvibaculum lavamentivorans DS-1]
Length = 228
Score = 71.2 bits (173), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 86/213 (40%), Gaps = 13/213 (6%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHN---NPV-NIYDLTESTKY--DESVQRH 54
M + K K+ + VL+ L +C + P ++Y LT T ++ +
Sbjct: 1 MRGAMMKTAIAKLTRLAALVLVLAPLGACALADVASGPAPSLYVLTAPTPALPGTAMAAN 60
Query: 55 IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST 114
QL + E +++ I+ + SP EI+Y G++WSD+ PRMI L+ N G+
Sbjct: 61 TQLSVREFQAPSAIDTGRIVFQPSPNEIKYYAGARWSDRAPRMIASLLVETLTNTGRFPA 120
Query: 115 VVKPNQGIYADYQIISAIRSFEINIDRHC-------AIITMSLKIINAHDNSLVGQKVFH 167
++ P D + IR+F D + ++++ A ++ + F
Sbjct: 121 ILGPETQARTDLALTGDIRAFSAFRDGAGLGEGATKVRVAFFVRLVRARGGVVLAGREFT 180
Query: 168 VEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
E + + N A S+I WTL
Sbjct: 181 AEAASASGRMDDIVAAYNAALDTALSDITAWTL 213
>gi|218886597|ref|YP_002435918.1| ABC transporter [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757551|gb|ACL08450.1| protein of unknown function DUF330 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 247
Score = 69.3 bits (168), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 18/138 (13%)
Query: 54 HIQLIITEPITEKILNSEDIIV---RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNG 110
H+QL I+ P T ++L+++ I++ + E++Y G++W+ PR++Q L+ FE G
Sbjct: 87 HLQLAISLPETSRMLDTDRIVLVLGGENGREVRYYAGAKWTSPAPRLVQRLLVEAFERAG 146
Query: 111 KISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI---ITMSLKIIN------------A 155
++ + + GIY DY++++ +R F + A + ++L+++N
Sbjct: 147 RLDGAAEESAGIYPDYRLMTDLRRFNTRMGEGAAPLVEVELALRLVNLKTGRIVAFTSIG 206
Query: 156 HDNSLVGQKVFHVEEKLE 173
D G + V E E
Sbjct: 207 RDCPAAGSALPQVAEAFE 224
>gi|209964742|ref|YP_002297657.1| lipoprotein, putative [Rhodospirillum centenum SW]
gi|209958208|gb|ACI98844.1| lipoprotein, putative [Rhodospirillum centenum SW]
Length = 224
Score = 68.9 bits (167), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 88/194 (45%), Gaps = 17/194 (8%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDI 73
CS+A +L P +Y L+ + ++ + R QL++ P+ +++ I
Sbjct: 22 GCSVADVLTPP---------PPRLYVLSPAREFTAGLPRVDWQLLVETPLANTGIDTARI 72
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ + + Y G+ W D+ P M QL LI +FEN+ +I V + G+ AD+ + + +R
Sbjct: 73 ALGETQSRLTYFAGANWVDRAPSMAQLLLIESFENSNRIVAVGREATGLRADFILKTDLR 132
Query: 134 SFEINID-------RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
F+ + R + M+ K++ +V + F + + I++++
Sbjct: 133 DFQAEYNGGTPGESRPVGRVRMTAKLVRMPRRIIVASESFEAQVPAKGSAFSDMIEAMDD 192
Query: 187 AFSRISSEIIDWTL 200
A + +++WT+
Sbjct: 193 ALEAVMRRMVEWTI 206
>gi|77463399|ref|YP_352903.1| hypothetical protein RSP_2812 [Rhodobacter sphaeroides 2.4.1]
gi|77387817|gb|ABA79002.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 201
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
C ++SS + ++ Y L+ RHI ++ L ++ I+++ S ++
Sbjct: 19 CGAVSSLSRASEQLDTYTLSPLPGTGGGGSRHI--VVEAATAGGALATDRILIKPSRVQA 76
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
YL ++WSD P ++Q L+ + +N G V + G+ DY +++ +R F+ +
Sbjct: 77 LYLPDARWSDPAPALVQTLLVGSLQNGGGFRLVAREAAGLVPDYTLMTELREFQAEVPPG 136
Query: 143 CAI---ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
A I+M L +I D S+ + + D+ + + + A ++ E + W
Sbjct: 137 QAPIVRISMVLTLIRESDRSVASTRRIETQAPAASDSTGDVVVAFDTAVTQALGEAVGWA 196
>gi|126462254|ref|YP_001043368.1| hypothetical protein Rsph17029_1486 [Rhodobacter sphaeroides ATCC
17029]
gi|126103918|gb|ABN76596.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
Length = 201
Score = 68.6 bits (166), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 80/180 (44%), Gaps = 5/180 (2%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
C ++SS + ++ Y L+ RHI ++ L ++ I+++ S ++
Sbjct: 19 CGAVSSLSRASEQLDTYTLSPLPGTGGGGSRHI--VVEAATAGGALATDRILIKPSRVQA 76
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
YL ++WSD P ++Q L+ + +N G V + G+ DY +++ +R F+ +
Sbjct: 77 LYLPDARWSDPAPALVQTLLVGSLQNGGGFRLVAREAAGLVPDYTLMTELREFQAEVPPG 136
Query: 143 CAI---ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
A I+M L +I D S+ + + D+ + + + A ++ E + W
Sbjct: 137 QAPVVRISMVLTLIRESDRSVASTRRIETQAPAASDSTGDVVVAFDTAVTQALGEAVGWA 196
>gi|119385045|ref|YP_916101.1| hypothetical protein Pden_2314 [Paracoccus denitrificans PD1222]
gi|119374812|gb|ABL70405.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 208
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 37 NIYDLTESTKYDESVQRH--IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
++++L + S R +L+I P L+++ I+VR + ++ QYL ++W D +
Sbjct: 30 DVFELRPPSDVPRSCGRGRLAELVIEPPKARGTLDTDRIMVRPNELQTQYLPDARWGDTV 89
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAII--TMSLKI 152
P +Q L+ F + V + G DY +IS + F + AII T+ ++
Sbjct: 90 PVTLQTLLVRGFGVYDAFTHVGRAPLGTAGDYALISEVNDFNAEVAGQGAIIKLTVDAQM 149
Query: 153 INAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ D +V + F + I + + A ++ +++ DW L ++
Sbjct: 150 VREMDARVVSRGHFTATAQAPTTKTADLIPAFDAAGQQLVAQMTDWGLRAV 200
>gi|319788028|ref|YP_004147503.1| hypothetical protein Psesu_2440 [Pseudoxanthomonas suwonensis 11-1]
gi|317466540|gb|ADV28272.1| protein of unknown function DUF330 [Pseudoxanthomonas suwonensis
11-1]
Length = 219
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 3/149 (2%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
QL I P ++L+S I VR P E+Q G+ W+ M++ ++ E++GKI V
Sbjct: 59 QLAIARPSAPRLLDSPRIGVRPVPGELQVYKGAVWAQTPADMLEASVLRVLEDSGKIEAV 118
Query: 116 VKPNQGIYADYQIISAIRSFEINI---DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKL 172
+ G+ A Y++ IR FE + D A + + K+++ D +V F
Sbjct: 119 GRQAAGLRAHYRLTMDIRRFEADYRGGDMPVASLEVVAKLVHNIDQRVVASHSFARTLPA 178
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+ ++A + +S EI WTL+
Sbjct: 179 SSTGIASVAAAFDQALAEVSGEIAGWTLA 207
>gi|300114236|ref|YP_003760811.1| hypothetical protein Nwat_1603 [Nitrosococcus watsonii C-113]
gi|299540173|gb|ADJ28490.1| protein of unknown function DUF330 [Nitrosococcus watsonii C-113]
Length = 217
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 100/202 (49%), Gaps = 8/202 (3%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLI--IT 60
+ +++++ S S+ + CT L S + P+ + L S D S ++ I I
Sbjct: 11 RVISRMMFLAFASLSMTLPACTLLPS----SAPLQTFILPPSKPVDASNAAPLKAILRIA 66
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P +IL I+V + ++ G++WS P +++ L+ F NG+++ V+ N
Sbjct: 67 TPQANEILKGRRILVMPTSNQLNVYQGARWSLDAPSLLRDHLMDVFRRNGRLAGVIGENN 126
Query: 121 GIYADYQIISAIRSF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ +D+ ++S + +F E + A+I + +++I++ L+ + F V + + +
Sbjct: 127 PVDSDFLLLSELHAFHSEYRGKKPWAVIRLDVQLIDSTSRDLLASRRFSVPVESQDERLE 186
Query: 179 HFIQSLNRAFSRISSEIIDWTL 200
+++ +A +S ++++W+L
Sbjct: 187 SVVEAFGQAVDELSRQLVEWSL 208
>gi|323136831|ref|ZP_08071912.1| protein of unknown function DUF330 [Methylocystis sp. ATCC 49242]
gi|322398148|gb|EFY00669.1| protein of unknown function DUF330 [Methylocystis sp. ATCC 49242]
Length = 213
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 4/147 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
LI+ EP + S+ ++VR + L G QWS++LPR+ Q +LI + G + +
Sbjct: 71 LIVREPAAVQPTGSDRVVVRDVDGSVSVLPGVQWSERLPRLFQNRLIEAMQRAGVPAGQI 130
Query: 117 KPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ A + + IR FEI++ R A++ + ++++ + + ++F E +
Sbjct: 131 S----LGATAALATDIRRFEIDVARSIAVVEIEARLVSESNGATRAAQLFTAEAPAPEHT 186
Query: 177 KLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ +L A + +++ I W +
Sbjct: 187 GAPAVHALGEASATVAARIAVWARGRM 213
>gi|221639254|ref|YP_002525516.1| hypothetical protein RSKD131_1155 [Rhodobacter sphaeroides KD131]
gi|221160035|gb|ACM01015.1| Hypothetical Protein RSKD131_1155 [Rhodobacter sphaeroides KD131]
Length = 195
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 79/179 (44%), Gaps = 5/179 (2%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
C ++SS + ++ Y L+ RHI ++ L ++ I+V+ S ++
Sbjct: 13 CGAVSSLSRASEQLDTYTLSPLPGTGGGGSRHI--VVEAATAGGALATDRILVKPSRVQA 70
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
YL ++WSD P ++Q L+ + +N G V + G+ DY +++ +R F+ +
Sbjct: 71 LYLPDARWSDPAPALLQTLLVGSLQNGGGFRLVAREAAGLVPDYTLMTELRDFQAEVPPG 130
Query: 143 CAI---ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
++M L +I D S+ + + D+ + + + A ++ E + W
Sbjct: 131 QTPTVHVSMVLTLIRESDRSVASTRRIEAQAPAASDSTGDVVVAFDTAVTQALGEAVAW 189
>gi|238791987|ref|ZP_04635623.1| hypothetical protein yinte0001_8870 [Yersinia intermedia ATCC
29909]
gi|238728618|gb|EEQ20136.1| hypothetical protein yinte0001_8870 [Yersinia intermedia ATCC
29909]
Length = 207
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L +++P T + LNS I V+ EI S+WSD P +++ +LI F ++G+I V
Sbjct: 55 LRVSQPATNQFLNSSRIAVQPQGQEIAVYKNSRWSDSAPILVRNRLIQAFRSDGRIRAVS 114
Query: 117 KPNQGIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD ++ + +F+ ++ +I +++ D ++ + F + + ++
Sbjct: 115 SDDDSLQADVELSGDLSAFQGVYHVGSSEVLIRFDARLVRISDRRIIATRQFEIRQPIKG 174
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ +Q+ A ++++++++WT+ P
Sbjct: 175 NEMNEVVQAFGLASDQLATQVLNWTMQQSP 204
>gi|300917990|ref|ZP_07134616.1| lipofamily protein [Escherichia coli MS 115-1]
gi|300414816|gb|EFJ98126.1| lipofamily protein [Escherichia coli MS 115-1]
Length = 213
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 77/150 (51%), Gaps = 2/150 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L +++P T + LNS I V+ EI S+WSD P +++ +LI F ++G+I V
Sbjct: 61 LRVSQPATNQFLNSSRIAVQPQGQEIAVYKNSRWSDSAPILVRNRLIQAFRSDGRIRAVS 120
Query: 117 KPNQGIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD ++ + +F+ ++ +I +++ D ++ + F + + ++
Sbjct: 121 SDDDSLQADVELSGDLSAFQGVYHVGSSEVLIRFDARLVRISDRRIIATRQFDIRQPIKG 180
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ +Q+ A ++++++++WT+ P
Sbjct: 181 NEMNEVVQAFGLASDQLATQVLNWTMQQSP 210
>gi|237808110|ref|YP_002892550.1| hypothetical protein Tola_1349 [Tolumonas auensis DSM 9187]
gi|237500371|gb|ACQ92964.1| protein of unknown function DUF330 [Tolumonas auensis DSM 9187]
Length = 207
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYD-ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
S S F PVN+Y L EST +S L I P + L+S I V +I
Sbjct: 18 SACSLFPETRPVNVYMLPESTPVQTQSSSVDWSLRINTPYANQTLDSTRIAVIPDGNQIN 77
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--DR 141
++W+D++P +++ +LI F ++G+I T+ N I D ++IS +R+F+ +
Sbjct: 78 SYKSARWNDRVPVLLRERLIDTFRSDGRIKTITNDNGLINTDAELISELRAFQSEYIHGK 137
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+ + ++ ++ ++ F + + + +Q+ +A ++S E++ W +
Sbjct: 138 PEVRVQLDTHLVQRNNQQVLASYRFEARQASKDASVASVVQAFGQATDQLSREVVAWAI 196
>gi|217969578|ref|YP_002354812.1| hypothetical protein Tmz1t_1157 [Thauera sp. MZ1T]
gi|217506905|gb|ACK53916.1| protein of unknown function DUF330 [Thauera sp. MZ1T]
Length = 247
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L + P L + I+V + G+ WSD P +++ +L+ F +G++ +
Sbjct: 95 LRVVRPAAGVHLAGQRIVVMPEGNRVSVYQGAGWSDPAPALLRDRLLEAFRADGRVGALS 154
Query: 117 KPNQGIYADYQIISAIRSF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ++AD+++ S +R+F E R A++ + ++++ +V + F +
Sbjct: 155 SDERQLHADFELDSDLRAFQSEYRGGRPEAVLRLDARLVHTASRRIVASRTFEQRQPTAD 214
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTL 200
+Q+ A R+S+E+++WT+
Sbjct: 215 PAVPAVVQAFGAAADRLSAEVVEWTV 240
>gi|149374949|ref|ZP_01892722.1| putative ABC-type uncharacterized transport system [Marinobacter
algicola DG893]
gi|149360838|gb|EDM49289.1| putative ABC-type uncharacterized transport system [Marinobacter
algicola DG893]
Length = 203
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 91/195 (46%), Gaps = 9/195 (4%)
Query: 18 LAVLLCTSLSSC-FFHNNPVN-IYDLTESTKYDESVQRH----IQLIITEPITEKILNSE 71
L V + T LS+C F + P N ++ L ST + S+ + L P+ E ++S
Sbjct: 10 LCVTVATMLSACTLFPDRPANRLFQLPAST-VETSITGNKPFSTTLRFVTPLAEGPVDSS 68
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
I+V+ EI+ G++WS+K P +++ +LI F +G+ + ++ +D +
Sbjct: 69 RILVKPEGNEIKAYQGARWSNKSPILVRDQLIDAFRRDGRFAGIITGTSPARSDLTMAGE 128
Query: 132 IRSF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ +F E A+I + L +I+ + + K F + + +++ A +
Sbjct: 129 LSAFQSEYQDGMPVALIRLDLHLIDERTRNTLANKRFEYQHPATGEQVEAIVEAFGEASN 188
Query: 190 RISSEIIDWTLSSLP 204
++ E+I WT+ P
Sbjct: 189 ALAREVIHWTVEQRP 203
>gi|146342152|ref|YP_001207200.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
ORS278]
gi|146194958|emb|CAL78983.1| Putative ABC transporter (substrate binding protein)
[Bradyrhizobium sp. ORS278]
Length = 366
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 8/169 (4%)
Query: 39 YDLTESTKYDESVQRHI--QLIITEPITEKILNSEDIIVRSSPIEIQYLIGS-QWSDKLP 95
YDLT V + I QL I EP +L ++ ++ SP + G W+D +P
Sbjct: 202 YDLTAPRDLGP-VNKTIKGQLAIPEPTAVAMLQTQRMLF--SPAKDYPGFGDVLWADSIP 258
Query: 96 RMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC-AIITMSLKIIN 154
+++Q +LI FEN ++ + D Q++ +R F IN+D A I +S ++++
Sbjct: 259 KLLQARLIDTFENYDVAHAPLRASDLGQPDVQLLIDVRRFRINVDATAVADIGLSARLVD 318
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
++ ++F + + + N + + ++AF R++ I+ WT+ SL
Sbjct: 319 -KSGKIIASRLFDESQPVGQINPADAVAAFDQAFGRLAKSILAWTVQSL 366
>gi|312958195|ref|ZP_07772718.1| lipoprotein [Pseudomonas fluorescens WH6]
gi|311287626|gb|EFQ66184.1| lipoprotein [Pseudomonas fluorescens WH6]
Length = 203
Score = 64.7 bits (156), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
L S S +P ++Y L + + L +T+P T + L+S I V +
Sbjct: 12 ALALISACSILPKADPSDVYRLAATQTATQGAPVSWSLRVTKPQTSEFLDSPRIAVVPNG 71
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI 139
I S+WSD P +++ +L+ F+ +G+++ + + ADY++ +++F+
Sbjct: 72 DLISSYANSRWSDPAPVLLRNRLLDGFQRDGRVTLLSTDETNLQADYELGGQLQAFQSEY 131
Query: 140 DRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
R A +I + +++ D ++ + F V + + + + +A +++ +++
Sbjct: 132 -RGSAVEVVIRLDARLVRGSDQRIMASRRFEVRQPVADTKVPAVVAAFGQAGDQLNKQVV 190
Query: 197 DWTL 200
DW +
Sbjct: 191 DWVV 194
>gi|123441587|ref|YP_001005573.1| hypothetical protein YE1250 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088548|emb|CAL11342.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 211
Score = 64.3 bits (155), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L +++P T + +NS I V+ EI S+W+D P +++ +LI F NG+I V
Sbjct: 61 LRVSQPATNQFINSSRIAVQPEGQEIAVYKNSRWTDPAPILVRNRLIQEFRANGRIPAVS 120
Query: 117 KPNQGIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD ++ + +F+ + D +I +++ D ++ + F V + ++
Sbjct: 121 SDDDSLQADVELSGDLSAFQGVYHADSSEVLIRFDARLVRISDRRIMATRHFEVRQPIKG 180
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + A ++++S++++WTL P
Sbjct: 181 AQMNEVVDAFGLASNQLASQVLNWTLQQSP 210
>gi|70733609|ref|YP_257249.1| putative lipoprotein [Pseudomonas fluorescens Pf-5]
gi|68347908|gb|AAY95514.1| lipoprotein, putative [Pseudomonas fluorescens Pf-5]
Length = 209
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/205 (19%), Positives = 94/205 (45%), Gaps = 11/205 (5%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL----TESTKYDESVQRHIQLI 58
K+ +++ +S +LA+ T S P++IY L +T ++++ +QL+
Sbjct: 2 KRAYRLLAPLGLSAALAL---TGACSILPKGEPLDIYRLPVSQAGATAPNQALPWSLQLL 58
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
+P LNS I V I S+WSD P +++ +L+ F+ +G++ +
Sbjct: 59 --KPQAGDALNSARIAVIPQGNLISSYKASRWSDPAPILLRNRLLDGFQRDGRVQLLSTD 116
Query: 119 NQGIYADYQIISAIRSFEINIDRHCA--IITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ + D + +++F+ + A +I + ++I +D ++ + F V + L +
Sbjct: 117 DSNLQTDLALGGDLQAFQTEYQGNAAQVVIRLDARLIRGYDQKILASRRFEVRQALAETG 176
Query: 177 KLHFIQSLNRAFSRISSEIIDWTLS 201
+ +A ++ +++DW +
Sbjct: 177 VPAVVTGFGQAGDALTRQVVDWAVG 201
>gi|104779405|ref|YP_605903.1| lipoprotein [Pseudomonas entomophila L48]
gi|95108392|emb|CAK13086.1| putative lipoprotein [Pseudomonas entomophila L48]
Length = 204
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/179 (19%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Query: 28 SCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIG 87
S PV+IY L + L + +P+ + L I V I G
Sbjct: 21 SILPQGEPVDIYRLPVGQTARGASPLDWSLRLNKPLASEALAGPRIAVIPQGDVISSYKG 80
Query: 88 SQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA--- 144
++WSD +P +++ +L+ F+ +G++ + + + ADY++ +++F+ +
Sbjct: 81 ARWSDPVPMLVRNRLLDGFQRDGRVQRLSADDSNLQADYELGGELQAFQAEYRPGGSVEV 140
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+I +++ ++ K F V + L + + A +++ ++IDWT+S +
Sbjct: 141 VIRYDARLVQGRSQRILASKRFEVRQPLGQLQVPAVVAGFGTASDQLARQVIDWTVSQV 199
>gi|229587672|ref|YP_002869791.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229359538|emb|CAY46379.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 203
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 84/184 (45%), Gaps = 4/184 (2%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
L S S +P ++Y LT + + L + +P T + L+S I V +
Sbjct: 12 ALALVSACSILPKADPSDVYRLTSAQTTSQGAPVSWSLRVNKPQTSEFLDSPRIAVVPNG 71
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI 139
I S+WSD P +++ + + F+ +G+++ + + + +DY++ +++F+
Sbjct: 72 DLISSYANSRWSDPSPVLLRNRFMDGFQRDGRVTLLSTDDTNLQSDYELGGQLQAFQSEY 131
Query: 140 DRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
R A +I + +++ D +V + F V + + + +A +++ +++
Sbjct: 132 -RGSAVEVVIRLDARLVRGSDQRIVASRRFEVRQPVSDTKVPAVVAGFGQAGDQLNKQVV 190
Query: 197 DWTL 200
DW +
Sbjct: 191 DWVV 194
>gi|302039180|ref|YP_003799502.1| putative ABC transporter auxiliary component [Candidatus Nitrospira
defluvii]
gi|300607244|emb|CBK43577.1| putative ABC-type transport system, auxiliary component [Candidatus
Nitrospira defluvii]
Length = 215
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 88/211 (41%), Gaps = 19/211 (9%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFF---HNNPVNIYDLTESTKYDESVQR----------H 54
++ ++ I AV++ +L++C NPV+ + LT DES R H
Sbjct: 1 MVSRRAIPWVGAVMMSCALAACVLPRSAENPVHTFLLT----IDESAWRAGARAGQPEVH 56
Query: 55 IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST 114
L++ P E + P E+ Y + W D RM+ L+ + E G
Sbjct: 57 GVLVVGLPQAEAGFEQPRMAYLQRPYEVSYYATNVWVDAPARMLAPLLVRSLEATGLWRV 116
Query: 115 VVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKL 172
VV + DY++ ++ + + + + L+ ++ D ++G + F V E
Sbjct: 117 VVSMPTVVRGDYRLDTSGLVLQQEFLQQPSRTRLHLRAQLLEMKDQRVLGVRSFEVLEPA 176
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
D+ +Q+ NRA +R+ + DW S L
Sbjct: 177 SSDDAYGGVQAANRAVTRVLEALNDWIASCL 207
>gi|238789960|ref|ZP_04633739.1| hypothetical protein yfred0001_37270 [Yersinia frederiksenii ATCC
33641]
gi|238721908|gb|EEQ13569.1| hypothetical protein yfred0001_37270 [Yersinia frederiksenii ATCC
33641]
Length = 205
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 96/199 (48%), Gaps = 9/199 (4%)
Query: 12 KIISCSLAVLLCTSLSSC-FFHNNPV-NIY--DLTESTKYDESVQRHIQLIITEPITEKI 67
++++ S+ V+L LS+C PV +Y + +T + + L +++P T +
Sbjct: 9 RLLTASMLVML---LSACTILPTAPVAQVYLLPVPPATNTPRTQTVNWSLRVSQPATNQF 65
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
+NS I V+ EI S+W+D P +++ +LI F +G+IS V + + AD +
Sbjct: 66 INSSRIAVQPEGQEIAVYKNSRWTDPAPILLRNRLIHEFRTDGRISAVSSDDDSLQADVE 125
Query: 128 IISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ + +F+ +I +++ D ++ + F + + ++ + +
Sbjct: 126 LSGDLSAFQGVYQAGNSEVLIRFDARLVRISDRRIIATRHFEIRQPIKGSQMNEVVDAFG 185
Query: 186 RAFSRISSEIIDWTLSSLP 204
A +++++++++WTL P
Sbjct: 186 LASNQLATQVLNWTLQQSP 204
>gi|148545414|ref|YP_001265516.1| ABC transporter auxiliary component-like protein [Pseudomonas
putida F1]
gi|148509472|gb|ABQ76332.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Pseudomonas putida F1]
Length = 211
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/180 (18%), Positives = 80/180 (44%), Gaps = 3/180 (1%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
S S + PV++Y L + + L + +P+ ++L I V I
Sbjct: 18 SACSILPKSEPVDLYRLPVNQPSRTAPPLEWSLRLNKPLASEVLAGPRIAVIPQGDVISS 77
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA 144
G++WSD P +++ +L+ F+ +G++ + + + ADY++ +++F+ A
Sbjct: 78 YKGARWSDAAPVLLRNRLLDGFQRDGQVQRLSADDSNLQADYELAGELQAFQSEYRPGGA 137
Query: 145 ---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+I +++N D + K F + + L + +A ++ +++ WT++
Sbjct: 138 VEVVIRYDARLVNGRDQRIQASKRFEIRQPLADKQVSAVVAGFGQASDQLVGQVVSWTIA 197
>gi|238754550|ref|ZP_04615904.1| hypothetical protein yruck0001_4180 [Yersinia ruckeri ATCC 29473]
gi|238707181|gb|EEP99544.1| hypothetical protein yruck0001_4180 [Yersinia ruckeri ATCC 29473]
Length = 145
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
+ + +NS I V+ EI S+WSD P +++ +LI F +G++ V + +
Sbjct: 1 MANQFINSTRIAVQPQGQEIAVYKASRWSDATPILVRNRLIQEFRADGRVRAVSSDDDSL 60
Query: 123 YADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
AD ++ + +F+ N D I +++ D ++ + F + + ++ +
Sbjct: 61 QADVELSGDLSAFQGVYNSDGSIVRIRFDARLVRVSDRRIIATRQFDIHQPIKGTDMNDV 120
Query: 181 IQSLNRAFSRISSEIIDWTLSSLP 204
+Q+ A R++++++ WTL P
Sbjct: 121 VQAFGAAGDRLAAQVLKWTLQQAP 144
>gi|238784665|ref|ZP_04628670.1| hypothetical protein yberc0001_28090 [Yersinia bercovieri ATCC
43970]
gi|238714437|gb|EEQ06444.1| hypothetical protein yberc0001_28090 [Yersinia bercovieri ATCC
43970]
Length = 207
Score = 62.4 bits (150), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 73/146 (50%), Gaps = 2/146 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L +++P T + LNS I V+ EI S+WSD P +++ +LI F +G+I V
Sbjct: 55 LRVSQPATSQFLNSSRIAVQPQGQEIAVYQNSRWSDPAPILVRNRLIQEFRADGRIRAVS 114
Query: 117 KPNQGIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD ++ + +F+ D+ +I +++ D ++ + F + + ++
Sbjct: 115 SDDDSLQADVELSGDLSAFQGVYLTDKSEVLIRFDARLVRISDRRIIATRHFEIRQPIKG 174
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTL 200
+Q+ A ++++++++W L
Sbjct: 175 TEMNEVVQAFGLASDQLATQVLNWML 200
>gi|238796787|ref|ZP_04640292.1| hypothetical protein ymoll0001_25890 [Yersinia mollaretii ATCC
43969]
gi|238719275|gb|EEQ11086.1| hypothetical protein ymoll0001_25890 [Yersinia mollaretii ATCC
43969]
Length = 207
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L +++P T + LNS I V+ EI S+WSD P +++ +LI F +G+I V
Sbjct: 55 LRVSQPTTSQFLNSSRIAVQPQGQEIAVYQNSRWSDPAPILLRNRLIQEFRADGRIRAVS 114
Query: 117 KPNQGIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD ++ + +F+ D+ +I +++ D ++ F + + +
Sbjct: 115 SDDDSLQADVELSGDLSAFQGVYLTDKSEVLIRFDARLVRISDRRIIATHHFEIRQPISG 174
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTL-SSLPLS 206
+Q+ A ++++++++W L SLP S
Sbjct: 175 TKMDEVVQAFGLASDQLAAQVLNWMLQQSLPSS 207
>gi|325273985|ref|ZP_08140144.1| ABC transporter auxiliary component-like protein [Pseudomonas sp.
TJI-51]
gi|324100874|gb|EGB98561.1| ABC transporter auxiliary component-like protein [Pseudomonas sp.
TJI-51]
Length = 205
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 88/197 (44%), Gaps = 4/197 (2%)
Query: 9 IKKKIISCSLAVLLC-TSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
+K + +LAV + TS S + PV++Y L + + L + +P+ ++
Sbjct: 1 MKSSLRLVALAVTIGLTSACSILPTSEPVDLYRLPVNQVSRSAPPLDWSLRLNKPLASEV 60
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
L I V + G++WSD P +++ +L+ F+ +G++ + + + ADY+
Sbjct: 61 LAGPRIAVIPQGNVVSSYKGARWSDPAPMLLRNRLLDGFQRDGQVQRLSADDSNLQADYE 120
Query: 128 IISAIRSF--EINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
+ +++F E D +I +++ ++ K F V + L +
Sbjct: 121 LAGELQAFQSEYRADGTVEVVIRYDARLVQGRTQRILASKRFEVRQPLADKQVAGVVAGF 180
Query: 185 NRAFSRISSEIIDWTLS 201
+A ++ +++DW ++
Sbjct: 181 GQACDLLTGQVVDWAIA 197
>gi|330806716|ref|YP_004351178.1| Putative lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327374824|gb|AEA66174.1| Putative lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 211
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/202 (20%), Positives = 86/202 (42%), Gaps = 8/202 (3%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIIT 60
K N+ I+ ++ LA + S P ++Y L T+ S + L +
Sbjct: 2 KPSNRFIRPLLL---LAGFVLVGGCSILPKAEPSDVYRL-PVTQAPASAGAAVSWSLRLA 57
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P ++LNS I V S+WSD P +++ +L+ F +G++ + +
Sbjct: 58 NPQASEVLNSPKIAVIPQGNLFSSYAASRWSDPAPVLLRNRLLDGFAQDGRVRLLSVADS 117
Query: 121 GIYADYQIISAIRSFEINIDRHCA--IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ AD ++ +++F+ A +I + ++ D ++ + F V + L
Sbjct: 118 NLQADLELGGQLQAFQTEYQGTAASVVIRLDALLVRGFDQRILASRRFEVRQPLSDVKVP 177
Query: 179 HFIQSLNRAFSRISSEIIDWTL 200
+ RA R+++E++ WTL
Sbjct: 178 AVVDGFGRAGDRLTAEVVAWTL 199
>gi|119897562|ref|YP_932775.1| hypothetical protein azo1271 [Azoarcus sp. BH72]
gi|119669975|emb|CAL93888.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 214
Score = 61.2 bits (147), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 81/170 (47%), Gaps = 3/170 (1%)
Query: 34 NPVNIYDLTES-TKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSD 92
PV++Y L + T S + L + +P T L + I+V + G+ WSD
Sbjct: 36 EPVDVYLLPATRTPPAASPALALALRVAKPETSLHLAGQRIVVLPEGDRVSVYKGASWSD 95
Query: 93 KLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF--EINIDRHCAIITMSL 150
P +++ +L+ F +G+I+ + ++ ++AD ++ S +R+F E R A++ +
Sbjct: 96 PAPLLVRNRLLDAFHGDGRIAALSSDDRSLHADLELDSDLRAFHSEYRDGRPEAVVRLDA 155
Query: 151 KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+++ ++ + F V + +++ A +S+E++ WTL
Sbjct: 156 RLVAPASLRILASRRFEVRHPAASADVKDVVRAFGAAADALSAEVVAWTL 205
>gi|148257021|ref|YP_001241606.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
BTAi1]
gi|146409194|gb|ABQ37700.1| Putative ABC transporter (substrate binding protein)
[Bradyrhizobium sp. BTAi1]
Length = 367
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 77/150 (51%), Gaps = 5/150 (3%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIG-SQWSDKLPRMIQLKLIANFENNGKIST 114
QL I EP +L ++ I+ SP + G + W+D +P+++Q +LI FEN
Sbjct: 221 QLAIPEPTAVAMLQTQRILF--SPAKDYPGFGDALWADSIPKLLQARLIDAFENYDIAHA 278
Query: 115 VVKPNQGIYADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLE 173
++ D Q++ +R F IN D + I +S ++++ ++ ++F + ++
Sbjct: 279 PLRTADLGQPDVQLLVDVRRFRINTDPTAVVEIGLSARLVD-KSGKIIASRLFDESQPVD 337
Query: 174 KDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ + + + ++AF R++ ++ WT+ +L
Sbjct: 338 RLDPAIAVTAFDQAFGRVAKSLLTWTVQAL 367
>gi|206575545|ref|YP_002235752.1| hypothetical protein KPK_A0104 [Klebsiella pneumoniae 342]
gi|206570389|gb|ACI12035.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
Length = 214
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 88/188 (46%), Gaps = 9/188 (4%)
Query: 18 LAVLLCTSLSSC-FFHNNPVN-IYDLTESTKYDES---VQRHIQLIITEPITEKILNSED 72
L VL+C L++C PV+ ++ L S + R ++++ +P T + +NS
Sbjct: 19 LIVLVCLPLAACTVLPQRPVSQVWLLPAQPGVPASGPTINRSLRVM--QPSTSQFINSSR 76
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
I V+ EI GS+WSD +P + + +L +G+ +V + AD+++ +
Sbjct: 77 IAVQPQGAEITVYSGSRWSDSVPVLFRNRLTQELRTDGRFISVSSDEDNLQADFELGGDL 136
Query: 133 RSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
SF+ + +I +++ D ++ + F + + + + +++ A R
Sbjct: 137 SSFQGVYRGKKGEVLIQFDARLVQTSDRRVIASQRFVIHQPISGSSMNEVVEAFGLASDR 196
Query: 191 ISSEIIDW 198
++++I+ W
Sbjct: 197 LAADILRW 204
>gi|332162487|ref|YP_004299064.1| hypothetical protein YE105_C2865 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606567|emb|CBY28065.1| membrane lipoprotein lipid attachment site containing protein
USSDB6D [Yersinia enterocolitica subsp. palearctica Y11]
gi|325666717|gb|ADZ43361.1| hypothetical protein YE105_C2865 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861185|emb|CBX71442.1| hypothetical protein YEW_CA08670 [Yersinia enterocolitica W22703]
Length = 211
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 87/193 (45%), Gaps = 6/193 (3%)
Query: 16 CSLAVLL--CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDI 73
LA+LL CT L S V + + + + + L +++P T + +NS I
Sbjct: 20 SGLAMLLSACTILPSAPVSQ--VYLLPVPPAANAPRAQAVNWSLRVSQPATNQFINSSRI 77
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
V+ EI S+W+D P +++ +LI F +G+I V + + AD ++ +
Sbjct: 78 AVQPEGQEIAVYKNSRWTDPAPILVRNRLIQEFRTDGRIPAVSSDDDSLQADVELSGDLS 137
Query: 134 SFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
+F+ +I +++ D ++ + F V + ++ + + A +++
Sbjct: 138 AFQGVYQAGNSEVLIRFDARLVRISDRRIMATRHFEVRQPIKGAQMNEVVDAFGLASNQL 197
Query: 192 SSEIIDWTLSSLP 204
+S++++W L P
Sbjct: 198 ASQVLNWALQQSP 210
>gi|238751980|ref|ZP_04613465.1| hypothetical protein yrohd0001_23850 [Yersinia rohdei ATCC 43380]
gi|238709814|gb|EEQ02047.1| hypothetical protein yrohd0001_23850 [Yersinia rohdei ATCC 43380]
Length = 205
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/150 (20%), Positives = 76/150 (50%), Gaps = 2/150 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L +++P T + +NS I V+ EI S+W+D P +++ +LI F +G+I V
Sbjct: 55 LRVSQPATNQFINSSRIAVQPEGQEIAVYKNSRWTDPTPILVRNRLIQEFRTDGRIPAVS 114
Query: 117 KPNQGIYADYQIISAIRSFE-INIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD ++ + +F+ + + + + I +++ D ++ + F + + ++
Sbjct: 115 SDDDSLQADVELSGDLSAFQGVYLAGNSEVLIRFDARLVRISDRRIIATRHFEIRQPIKG 174
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
I + A +++++++++WTL P
Sbjct: 175 SQMDEVIDAFGLASNQLATQVLNWTLQQSP 204
>gi|238764192|ref|ZP_04625145.1| hypothetical protein ykris0001_6580 [Yersinia kristensenii ATCC
33638]
gi|238697605|gb|EEP90369.1| hypothetical protein ykris0001_6580 [Yersinia kristensenii ATCC
33638]
Length = 194
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/150 (21%), Positives = 71/150 (47%), Gaps = 2/150 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L +++P T + +NS I V+ EI S+W+D P +++ +LI F +G+I V
Sbjct: 44 LRVSQPATNQFINSSRIAVQPDGQEIAVYKNSRWTDPAPILVRNRLIQEFRTDGRIPAVS 103
Query: 117 KPNQGIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD ++ + +F+ +I +++ D ++ + F V + ++
Sbjct: 104 SDDDSLQADVELSGDLSAFQGVYQAGNSEVLIRFDARLVRISDRRIMATRHFEVRQPIKG 163
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + A ++ S++++WTL P
Sbjct: 164 AQMNEVVAAFGLASDQLVSQVLNWTLQQSP 193
>gi|313496510|gb|ADR57876.1| Putative lipoprotein [Pseudomonas putida BIRD-1]
Length = 211
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/173 (16%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWS 91
+ PV++Y L + + L + +P+ ++L I V + G++WS
Sbjct: 25 QSEPVDLYRLPVNQPSRTAPPLDWSLRLNKPLASEVLAGPRIAVVPQGNVVSSYKGARWS 84
Query: 92 DKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA---IITM 148
D P +++ +L+ F+ G++ + + + ADY++ +++F+ A +I
Sbjct: 85 DAAPVLLRNRLLDGFQREGQVQRLSADDSNLQADYELAGELQAFQSEYRTDGAVEVVIRY 144
Query: 149 SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+++ + ++ K F + + L+ + +A ++ ++++WT++
Sbjct: 145 DARLVQGRNQRILASKRFEIRQPLDDKQVSAVVAGFGQASDQLVGQVVNWTIT 197
>gi|170724245|ref|YP_001751933.1| hypothetical protein PputW619_5088 [Pseudomonas putida W619]
gi|169762248|gb|ACA75564.1| protein of unknown function DUF330 [Pseudomonas putida W619]
Length = 207
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/177 (17%), Positives = 80/177 (45%), Gaps = 3/177 (1%)
Query: 28 SCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIG 87
S + PV+IY L + + L + +P+ ++L I V + G
Sbjct: 21 SILPQSEPVDIYRLPVNQASHSATPVPWSLRLNKPLASEVLAGPRIAVIPKGDVVSSYKG 80
Query: 88 SQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA--- 144
++WSD +P +++ +L+ F+ +G++ + + + ADY++ +++F+
Sbjct: 81 ARWSDPVPLLLRNRLLDGFQRDGRVQRLSADDSNLQADYELAGELQAFQSEYRPTGTVEV 140
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+I +++ ++ K F V + L + A ++++++++WT++
Sbjct: 141 VIRYDARLVQGRSQRILASKRFEVRQPLVDTQVSAVVAGFGVANDQLAAQVVNWTVA 197
>gi|23011784|ref|ZP_00052043.1| COG3218: ABC-type uncharacterized transport system, auxiliary
component [Magnetospirillum magnetotacticum MS-1]
Length = 125
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE 65
+ ++ + SLA L C P+ +DL + ++++EP+
Sbjct: 12 GRGLRAGALVASLAFL-----GGCGGGATPLT-FDLAALPGQPRAGGPARSIVVSEPVGL 65
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
+ + ++ IIVR + + +L G QW+D+LPR+IQ ++I + EN G++ +V P
Sbjct: 66 QPMEADRIIVREAGGSLSFLGGGQWADRLPRLIQTRVIQSLENTGRLRSVSYPG 119
>gi|167031176|ref|YP_001666407.1| lipoprotein [Pseudomonas putida GB-1]
gi|166857664|gb|ABY96071.1| lipoprotein [Pseudomonas putida GB-1]
Length = 211
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/177 (16%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 28 SCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIG 87
S + PV++Y L + + L + +P+ ++L I V + G
Sbjct: 21 SILPKSEPVDLYRLPVNQPSRTAPALDWSLRLNKPLASEVLAGPRIAVIPQGDMVSSYKG 80
Query: 88 SQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA--- 144
++WSD P +++ +L+ F+ +G++ + + + ADY++ +++F+ A
Sbjct: 81 ARWSDAAPVLLRNRLLDGFQRDGQVQRLSADDSNLQADYELAGELQAFQSEYRPGGAVEV 140
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+I +++ + ++ K F + + L + +A ++ +++ WT++
Sbjct: 141 VIRYDARLVQGRNQRILASKRFEIRQPLTDKQVSAVVIGFGQASDQLVGQVVSWTIA 197
>gi|300312195|ref|YP_003776287.1| ABC transporter auxiliary component protein [Herbaspirillum
seropedicae SmR1]
gi|300074980|gb|ADJ64379.1| ABC-type uncharacterized transport system, auxiliary component
protein [Herbaspirillum seropedicae SmR1]
Length = 204
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/203 (18%), Positives = 88/203 (43%), Gaps = 14/203 (6%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ------RHIQLIITE 61
+++ +++ SL + C+ L +P +Y L +T R L I
Sbjct: 5 LLRTSLVAASLMLAACSILP----KPDPQAVYRLPTATAMPAQASTTAGDIRLRALRIAT 60
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P + ++SE I+V I+ G +WSD P + + +L+ F +G+ +
Sbjct: 61 PYANRSIDSERILVLPEGDVIKSYAGVRWSDAAPLLWRDRLLEAFRADGRYQRLSSDTGN 120
Query: 122 IYADYQIISAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
I AD ++ A+ +F+ RH +I ++I+ + + + F ++ ++
Sbjct: 121 IAADIELDGALSAFQTEY-RHGVPTVVIVYDARLIDTANRQQLASQRFAIQRAVDGSKVP 179
Query: 179 HFIQSLNRAFSRISSEIIDWTLS 201
+ + +A +++ E+++W +
Sbjct: 180 EVVSAFGQACDQLAKEVVNWAAA 202
>gi|163793378|ref|ZP_02187353.1| hypothetical protein BAL199_02684 [alpha proteobacterium BAL199]
gi|159181180|gb|EDP65695.1| hypothetical protein BAL199_02684 [alpha proteobacterium BAL199]
Length = 211
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 8/202 (3%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVN-IYDLTESTKYDESVQR-HIQLIITEPIT 64
++++ + +A L+ + S P +Y LT + + ++ QL + P +
Sbjct: 5 RLVRNAVGGALIAALVMVAGCSGLSLGGPSQQLYTLTPKSTFPANLPTVDWQLAVDRPSS 64
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
L + I V I Y G+QW D P M+Q LI +FEN+ I V + + + +
Sbjct: 65 PAGLATTRIAVIRGAHRIDYYAGAQWIDDAPNMVQRLLIESFENSKAIIGVGRESVSLRS 124
Query: 125 DYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFH---VEEKL-EKDNKLH- 179
D+ + +R F+ ++++ INA + +++ VE + DNK+H
Sbjct: 125 DFVLRVELREFQAEYQEGVEAPKVNVR-INAKLVRMPQRRIIASTTVERVIASPDNKIHS 183
Query: 180 FIQSLNRAFSRISSEIIDWTLS 201
+ + ++A ++ +I+ WT++
Sbjct: 184 IVDTFDQALGKVLRDIVVWTVT 205
>gi|26986884|ref|NP_742309.1| putative lipoprotein [Pseudomonas putida KT2440]
gi|24981487|gb|AAN65773.1|AE016203_6 lipoprotein, putative [Pseudomonas putida KT2440]
Length = 211
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/173 (16%), Positives = 78/173 (45%), Gaps = 3/173 (1%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWS 91
+ PV+ Y L + + L + +P+ ++L I V + G++WS
Sbjct: 25 QSEPVDHYRLPVNQPSRTAPPLDWSLRLNKPLASEVLAGPRIAVVPQGNVVSSYKGARWS 84
Query: 92 DKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA---IITM 148
D P +++ +L+ F+ G++ + + + ADY++ +++F+ A +I
Sbjct: 85 DAAPVLLRNRLLDGFQREGQVQRLSADDSNLQADYELAGELQAFQSEYRTDGAVEVVIRY 144
Query: 149 SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+++ + ++ K F + + L+ + +A ++ ++++WT++
Sbjct: 145 DARLVQGRNQRILASKRFEIRQPLDDKQVSAVVAGFGQASDQLVGQVVNWTIT 197
>gi|54294943|ref|YP_127358.1| hypothetical protein lpl2022 [Legionella pneumophila str. Lens]
gi|53754775|emb|CAH16262.1| hypothetical protein lpl2022 [Legionella pneumophila str. Lens]
Length = 200
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+++S +L +L SC PV N Y LT STK R I + +T P
Sbjct: 2 RVLSSVCFILGILTLMSCSPVKVPVTNEYQLTAYSTKQLTRKPRPITIQVTVPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E+++ P +++ + + W+ M+ L+ + +++G V ADY++
Sbjct: 62 TEEMLYMKKPFKLEPFVKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + E N + +I+ S KI+ H DN ++G ++ ++ +D + + N+A
Sbjct: 122 TQVLKLEQNFIKKPSILEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQA 181
Query: 188 FSRISSEIIDWTLS 201
R ++ D+ +S
Sbjct: 182 TFRFTATATDFVVS 195
>gi|54297972|ref|YP_124341.1| hypothetical protein lpp2027 [Legionella pneumophila str. Paris]
gi|53751757|emb|CAH13179.1| hypothetical protein lpp2027 [Legionella pneumophila str. Paris]
Length = 200
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+++S +L +L SC PV N Y LT STK R I + +T P
Sbjct: 2 RVLSSVCLILGILTLMSCSPVKVPVTNEYQLTAYSTKQLTRKPRPITIQVTVPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E+++ P +++ + + W+ M+ L+ + +++G V ADY++
Sbjct: 62 TEEMLYMKKPFKLEPFVKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + E N + +++ S KI+ H DN ++G ++ ++ +D + + N+A
Sbjct: 122 TQLLKLEQNFIKKPSVLEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQA 181
Query: 188 FSRISSEIIDWTLS 201
R ++ D+ +S
Sbjct: 182 TFRFTATATDFVVS 195
>gi|52842261|ref|YP_096060.1| hypothetical protein lpg2044 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629372|gb|AAU28113.1| conserved domain protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 200
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+++S +L +L SC PV N Y LT STK R I + +T P
Sbjct: 2 RVLSSVCFILGILTLMSCSPVKVPVTNEYQLTAYSTKQLTRKPRPITIQVTVPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E+++ P +++ + + W+ M+ L+ + +++G V ADY++
Sbjct: 62 TEEMLYMKKPFKLEPFVKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + E N + +++ S KI+ H DN ++G ++ ++ +D + + N+A
Sbjct: 122 TQLLKLEQNFIKKPSVLEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQA 181
Query: 188 FSRISSEIIDWTLS 201
R ++ D+ +S
Sbjct: 182 TFRFTATATDFVVS 195
>gi|307610775|emb|CBX00387.1| hypothetical protein LPW_21081 [Legionella pneumophila 130b]
Length = 200
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 89/194 (45%), Gaps = 4/194 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+++S +L +L SC PV N Y LT STK R I + +T P
Sbjct: 2 RVLSSVCFILGILTLMSCSPVKVPVTNEYQLTAYSTKQLTRKPRAITIQVTVPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E+++ P +++ + + W+ M+ L+ + +++G V ADY++
Sbjct: 62 TEEMLYMKKPFKLEPFVKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + E N + +++ S KI+ H DN ++G ++ ++ +D + + N+A
Sbjct: 122 TQLLKLEQNFIKKPSVLEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQA 181
Query: 188 FSRISSEIIDWTLS 201
R ++ D+ +S
Sbjct: 182 TFRFTATATDFVVS 195
>gi|148925788|ref|ZP_01809476.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845798|gb|EDK22889.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486]
Length = 199
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE +N + + A I+
Sbjct: 83 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLSADYALESRINSFEQILNNNENYAQIS 142
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 143 VSVNFINLENNQIIAHKIFNTKEKIEKKDIRSIYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|319956953|ref|YP_004168216.1| hypothetical protein Nitsa_1214 [Nitratifractor salsuginis DSM
16511]
gi|319419357|gb|ADV46467.1| protein of unknown function DUF330 [Nitratifractor salsuginis DSM
16511]
Length = 195
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 83/195 (42%), Gaps = 5/195 (2%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
K ++S +A L L C +++Y L + R + + P +
Sbjct: 2 KNLLSLLIAGALFFLLGGC--SGKTIHMYTLDAAGNLPRVHPRFSAIRVDYPKGIEDTMG 59
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
I S + Y SQWS L R++ LI + +G V+ A Y++
Sbjct: 60 TRIYFSRSDLTQSYYGYSQWSKSLNRILMANLIEALQRSGIARNVLDYASQADAPYELEC 119
Query: 131 AIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ FE I A I++ L++I D L+ K+F+ + + F+++ NRA
Sbjct: 120 TVYRFEHQITPQGSTAEISIGLRLIRTEDKKLIASKIFNYSIPCTQTDARGFVEAANRAI 179
Query: 189 SRISSEIIDWTLSSL 203
R+S+++I W LSS+
Sbjct: 180 FRLSTDMIRW-LSSV 193
>gi|315927600|gb|EFV06931.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 186
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE +N + + A I+
Sbjct: 70 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLSADYSLESRINSFEQILNNNENYAQIS 129
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 130 ISVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS 186
>gi|86149476|ref|ZP_01067707.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596065|ref|ZP_01099302.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 84-25]
gi|218563238|ref|YP_002345018.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|85840258|gb|EAQ57516.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190906|gb|EAQ94878.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360945|emb|CAL35746.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|284926843|gb|ADC29195.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni IA3902]
gi|315929477|gb|EFV08673.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
305]
Length = 199
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE +N + + A I+
Sbjct: 83 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLSADYSLESRINSFEQILNNNENYAQIS 142
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 143 ISVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|152086|gb|AAA26208.1| ORF 180 [Bradyrhizobium japonicum]
Length = 180
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 57 LIITEPITEKILNSEDII---VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIS 113
L I EP +L ++ ++ V +P +L W+D +P+++Q +LI +FEN
Sbjct: 35 LAIPEPTAVAMLQTQRMLFAPVGDNPGFADFL----WADSIPKLVQARLIDSFENYDIAH 90
Query: 114 TVVKPNQGIYADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKL 172
++ + ADYQ++ IR F I D + I +S +I++ + +V ++ EKL
Sbjct: 91 APLRTSDLGQADYQLLIDIRRFRIATDGETRVEIGLSARIVD-KNGKVVASRLVETSEKL 149
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+K + + + AF+RI+ E+I WT+
Sbjct: 150 DKVEPAAAVAAFDAAFARIAKELIGWTV 177
>gi|27381174|ref|NP_772703.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
USDA 110]
gi|30179810|sp|P29285|Y6063_BRAJA RecName: Full=Uncharacterized protein bll6063
gi|27354341|dbj|BAC51328.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
USDA 110]
Length = 367
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 57 LIITEPITEKILNSEDII---VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIS 113
L I EP +L ++ ++ V +P +L W+D +P+++Q +LI +FEN
Sbjct: 222 LAIPEPTAVAMLQTQRMLFAPVGDNPGFADFL----WADSIPKLVQARLIDSFENYDIAH 277
Query: 114 TVVKPNQGIYADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKL 172
++ + ADYQ++ IR F I D + I +S +I++ + +V ++ EKL
Sbjct: 278 APLRTSDLGQADYQLLIDIRRFRIATDGETRVEIGLSARIVD-KNGKVVASRLVETSEKL 336
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+K + + + AF+RI+ E+I WT+
Sbjct: 337 DKVEPAAAVAAFDAAFARIAKELIGWTV 364
>gi|57238660|ref|YP_179791.1| putative lipoprotein [Campylobacter jejuni RM1221]
gi|57167464|gb|AAW36243.1| lipoprotein, putative [Campylobacter jejuni RM1221]
gi|315059099|gb|ADT73428.1| Putative lipoprotein [Campylobacter jejuni subsp. jejuni S3]
Length = 199
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE +N + + A I+
Sbjct: 83 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLSADYALESRINSFEQILNNNENYAQIS 142
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 143 VSVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|86152615|ref|ZP_01070820.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843500|gb|EAQ60710.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 199
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE +N + + A I+
Sbjct: 83 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLSADYALESRINSFEQILNNNENYAQIS 142
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 143 ISVNFINLENNQIIAHKIFNTKEKIEKKDIHSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|205355661|ref|ZP_03222431.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346438|gb|EDZ33071.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421]
Length = 140
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE +N + + A I+
Sbjct: 24 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLSADYALESRINSFEQILNNNENYAQIS 83
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 84 VSVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS 140
>gi|86152317|ref|ZP_01070528.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 260.94]
gi|121613719|ref|YP_001001292.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81-176]
gi|167006186|ref|ZP_02271944.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81-176]
gi|315125048|ref|YP_004067052.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85840806|gb|EAQ58057.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 260.94]
gi|87249863|gb|EAQ72822.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81-176]
gi|315018770|gb|ADT66863.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 199
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE +N + + A I+
Sbjct: 83 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLNADYALESRINSFEQILNNNENYAQIS 142
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 143 ISVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|283957035|ref|ZP_06374507.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 1336]
gi|283791536|gb|EFC30333.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 1336]
Length = 199
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE +N + + A I+
Sbjct: 83 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLNADYALESRINSFEQILNNNENYAQIS 142
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 143 ISVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|77456268|ref|YP_345773.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
gi|77380271|gb|ABA71784.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 208
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/188 (18%), Positives = 81/188 (43%), Gaps = 5/188 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDII 74
LA S S + P+++Y L + S +H L + + + LN I
Sbjct: 9 LAGFTLISACSILPKSEPLDVYRLPAAQAPASAGSSATQHWSLRLNKLQASEALNRPSIA 68
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
V I S+WSD P +++ +L+ F+ +G++S + + AD ++ ++++
Sbjct: 69 VIPQGDVISSYKASRWSDPAPVLVRNRLLDGFQRDGRVSLLSTDDSNFQADLELGGSLQA 128
Query: 135 F--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F E + ++ + ++ +D ++ + F + L + +A R++
Sbjct: 129 FQTEYQGTQASVVVRVDALLVRGYDQRILASRRFEERQPLSDVQVPAVVAGFGQASDRLT 188
Query: 193 SEIIDWTL 200
++++ W +
Sbjct: 189 AKVVAWAV 196
>gi|157415869|ref|YP_001483125.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81116]
gi|157386833|gb|ABV53148.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81116]
gi|307748506|gb|ADN91776.1| probable lipoprotein [Campylobacter jejuni subsp. jejuni M1]
gi|315931382|gb|EFV10351.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
327]
Length = 199
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAIIT 147
W D + +++ FE + +T++ + ADY + S I SFE ++ + + A I+
Sbjct: 83 WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLNADYALESRINSFEQILSNNENYAQIS 142
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EII W S+L
Sbjct: 143 ISVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQKALNKIGNEIIFWVNSNLS 199
>gi|153951354|ref|YP_001398926.1| putative lipoprotein [Campylobacter jejuni subsp. doylei 269.97]
gi|152938800|gb|ABS43541.1| putative lipoprotein [Campylobacter jejuni subsp. doylei 269.97]
Length = 199
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 90 WSDKLPRMIQLKLI-ANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDRHCAII 146
W D LP + LI + FE + +T++ + ADY + S I SFE +N + + A I
Sbjct: 83 WGD-LPSNLYSSLILSKFEQSNIFTTLLSSTSSLNADYALESRINSFEQILNNNENYAQI 141
Query: 147 TMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
++S+ IN +N ++ K+F+ +EK+EK + + +A ++I +EI+ W S+L
Sbjct: 142 SISVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|148359618|ref|YP_001250825.1| transport protein [Legionella pneumophila str. Corby]
gi|296107660|ref|YP_003619361.1| ABC-type uncharacterized transport system, auxiliary component
[Legionella pneumophila 2300/99 Alcoy]
gi|148281391|gb|ABQ55479.1| transport system, auxiliary component [Legionella pneumophila str.
Corby]
gi|295649562|gb|ADG25409.1| ABC-type uncharacterized transport system, auxiliary component
[Legionella pneumophila 2300/99 Alcoy]
Length = 184
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 4/178 (2%)
Query: 28 SCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
SC PV N Y LT STK R I + +T P +E+++ P +++
Sbjct: 2 SCSPVKVPVTNEYQLTAYSTKQLTRKPRPITIQVTVPEAVAGYQTEEMLYMKKPFKLEPF 61
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI 145
+ + W+ M+ L+ + +++G V ADY++ + + E N + ++
Sbjct: 62 VKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLDTQLLKLEQNFIKKPSV 121
Query: 146 ITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+ S KI+ H DN ++G ++ ++ +D + + N+A R ++ D+ +S
Sbjct: 122 LEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQATFRFTATATDFVVS 179
>gi|121998621|ref|YP_001003408.1| putative ABC transporter [Halorhodospira halophila SL1]
gi|121590026|gb|ABM62606.1| putative ABC-type uncharacterized transport system [Halorhodospira
halophila SL1]
Length = 208
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L +T P + +L I V + + G++W LPR+ Q LI F +G+I +
Sbjct: 57 LRVTTPSSSDLLAGNRIAVATGEHRMSTFAGARWVSPLPRLWQEHLIETFYADGRIHRLS 116
Query: 117 KPNQGIYADYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + AD ++ + +R+F+I + A + + ++++ +V + F +
Sbjct: 117 ADGERLSADLELRTTLRAFQIETRDEGPRARVVVDARLVDVGQRRIVATERFAATRDVAS 176
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSS 202
D+ + +L A + E++ WT+++
Sbjct: 177 DDTDAAVAALGAANRSVGRELVAWTVTA 204
>gi|283953733|ref|ZP_06371264.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 414]
gi|283794774|gb|EFC33512.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 414]
Length = 114
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 124 ADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
A+Y + S I SFE +N D + A I++S+ IN +N ++ K+F+++E +EK +
Sbjct: 32 ANYVLESRINSFEQILNGDENYAQISISVNFINLENNQIIAHKIFNIKENIEKKDIRSTY 91
Query: 182 QSLNRAFSRISSEIIDWTLSSLP 204
+ +A ++I +EII W S+L
Sbjct: 92 NAFQKALNKIGNEIIFWVNSNLS 114
>gi|292490600|ref|YP_003526039.1| hypothetical protein Nhal_0466 [Nitrosococcus halophilus Nc4]
gi|291579195|gb|ADE13652.1| protein of unknown function DUF330 [Nitrosococcus halophilus Nc4]
Length = 208
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/197 (19%), Positives = 80/197 (40%), Gaps = 10/197 (5%)
Query: 10 KKKIISCSLAVLLCTSLSSCFF---HNNPVNIYDLTES-TKYDESVQRHIQLIITEPITE 65
++++ L +++ LSSC PV Y L + + L+++ P
Sbjct: 6 RRQLPYRGLCLIMVVILSSCTLSPKQPGPVRTYLLAPQLPPQTTAAPTPLTLLVSTPQAA 65
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA- 124
+ I P E+ Y +QW D RM++ L+ E +G ++ + I A
Sbjct: 66 AGYGTSQIAYTRKPYELDYFSRNQWVDTPERMLKPILVNALEASGHFQSIAPDDTRILAE 125
Query: 125 ---DYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
D +I+ ++ F + + + + ++I+ + + F E ++ +
Sbjct: 126 LRLDTEILRLVQDFSGQPSQ--SHLVLRARLIDLAKGEEIASQTFEAREPAPEEGPYGGV 183
Query: 182 QSLNRAFSRISSEIIDW 198
+LNRA RI E++ +
Sbjct: 184 IALNRALERILRELVTF 200
>gi|46579023|ref|YP_009831.1| putative lipoprotein [Desulfovibrio vulgaris str. Hildenborough]
gi|120603388|ref|YP_967788.1| lipoprotein [Desulfovibrio vulgaris DP4]
gi|46448436|gb|AAS95090.1| lipoprotein, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120563617|gb|ABM29361.1| lipoprotein, putative [Desulfovibrio vulgaris DP4]
gi|311232873|gb|ADP85727.1| protein of unknown function DUF330 [Desulfovibrio vulgaris RCH1]
Length = 211
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/146 (20%), Positives = 66/146 (45%), Gaps = 3/146 (2%)
Query: 55 IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST 114
+QL ++ P T + L+++ I + E+ YL +W +P+M+Q +I + +I T
Sbjct: 58 VQLAVSLPETTRSLDTDHIAILQG-RELSYLPNVRWGSHVPQMLQRHIIDALDAGTRIGT 116
Query: 115 VVKPNQGIYADYQIISAIRSFEINID-RHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKL 172
V + G++ D +++ I+ F + R + I + L++++ ++ + L
Sbjct: 117 VSAESAGVFPDVRLMVDIQQFAARTEARETGVDIRLRLQMLDVRKGRIIASQNVEAYVPL 176
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDW 198
D + + A S I + W
Sbjct: 177 ADDRRATLLDGFEAALSGILEKTARW 202
>gi|57168791|ref|ZP_00367922.1| probable lipoprotein Cj1649 [Campylobacter coli RM2228]
gi|305432467|ref|ZP_07401629.1| probable lipoprotein [Campylobacter coli JV20]
gi|57019838|gb|EAL56521.1| probable lipoprotein Cj1649 [Campylobacter coli RM2228]
gi|304444506|gb|EFM37157.1| probable lipoprotein [Campylobacter coli JV20]
Length = 200
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 64/116 (55%), Gaps = 2/116 (1%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMS 149
W+D + Q L++ FE + ++ + +DY + S I SFE +D + +++S
Sbjct: 82 WADLPNNLYQSLLLSKFEQSQIFKALLSQGSSVGSDYILESRIDSFEQVVDENENYVSIS 141
Query: 150 LKI--INAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ I I+A ++ ++ ++F ++E+++K + QS +A + + +EI+ W ++L
Sbjct: 142 ISINFIDAKESKIIAHRLFSIKERVKKIDIFDVYQSFEKALNSLGNEIVLWINATL 197
>gi|295690465|ref|YP_003594158.1| hypothetical protein Cseg_3100 [Caulobacter segnis ATCC 21756]
gi|295432368|gb|ADG11540.1| protein of unknown function DUF330 [Caulobacter segnis ATCC 21756]
Length = 211
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/207 (19%), Positives = 89/207 (42%), Gaps = 9/207 (4%)
Query: 11 KKIISCSLAVLLCTSLSSC---FFHNNPVNIYDLTEST-KYDESVQRHIQLIITEPITEK 66
+ I + L LS+C F PV +Y E+ + + ++ P T
Sbjct: 5 RSIARLTAVAALAIGLSACISVFPKTKPVGLYRFGEAEISATKGPPGAMFGVLKSPSTFT 64
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
+ D I+ S+ ++ Y+ ++W + + + FEN+ + ++ + AD
Sbjct: 65 RAAASDRILTSNQGQVAYIADARWVSPAFVLFEEAVARAFENDPGRARLIGRGEVAKADL 124
Query: 127 QIISAIRSFEIN-IDRHCA---IITMSLKIINAH-DNSLVGQKVFHVEEKLEKDNKLHFI 181
+ +R+FE + +D A ++ ++N + D LVG +VF K + +
Sbjct: 125 VLRLEVRTFETDYVDGPKAAPEVVVRVRGVLNRNSDRVLVGDQVFEARVKAADNRVSAIV 184
Query: 182 QSLNRAFSRISSEIIDWTLSSLPLSDN 208
+ ++A +++ E++ WT ++ P N
Sbjct: 185 PAYDKAVAQVLGEVVAWTNAAGPAIAN 211
>gi|83858855|ref|ZP_00952377.1| hypothetical protein OA2633_05111 [Oceanicaulis alexandrii
HTCC2633]
gi|83853678|gb|EAP91530.1| hypothetical protein OA2633_05111 [Oceanicaulis alexandrii
HTCC2633]
Length = 211
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 78/182 (42%), Gaps = 8/182 (4%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
C SL + PV++Y L +++ + Q ++ E IT + D + E+
Sbjct: 23 CISL---LPESEPVSLYRLNALVDEEQAPSANAQTLVIERITAPRGLAVDRVALLREGEL 79
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR- 141
Y+ G+ W P M+Q +++ ++ + G+ A Y++ +R FE D+
Sbjct: 80 AYMAGAAWLSPAPVMVQDRILDVLQSETPELIPARTEDGVDARYRLQIELRRFEAEYDQG 139
Query: 142 --HCAIITMSL--KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
+I M + ++I+ + +L + F V + + + I + + A + + +
Sbjct: 140 PSRAPVIQMRVMARLIDREERTLAAARRFDVSVRASDNRQSALIAAFSEATNDTARSLAQ 199
Query: 198 WT 199
W+
Sbjct: 200 WS 201
>gi|254496225|ref|ZP_05109119.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254354530|gb|EET13171.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 201
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 87/194 (44%), Gaps = 7/194 (3%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
K I S++ L +L +C PV N Y LTE S+K RHI L +T P
Sbjct: 5 KGIGVSMSAL---TLIACSPVKIPVTNQYQLTEYSSKQLAKHPRHIALWVTAPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E ++ + P + + + W++ M+ ++ + + G V+ ADY++
Sbjct: 62 TEQMLYVNKPFQRAPFVKNAWTNPPGDMLYPLMVQSLQRTGFFYAVMSSVYSQGADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKII--NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + S E N + ++I S K++ DN ++ K+ + + + + N+A
Sbjct: 122 TQLLSLEQNFLKKPSVIEFSAKVVLTKVADNKVIASKIISQQIPCPAETPYGGVVAANKA 181
Query: 188 FSRISSEIIDWTLS 201
+ ++ + D+ +S
Sbjct: 182 TRQFTAIMSDFVVS 195
>gi|114320358|ref|YP_742041.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226752|gb|ABI56551.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 208
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 81 EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS----FE 136
E+Q QW + RM+ L+A E++G V+ + A ++ + ++ FE
Sbjct: 79 ELQRFAHHQWVEPPARMLTPALVAVLEHDGPFRQVIHGPTVVDAPLRLHTELKRLEHRFE 138
Query: 137 INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
+ D ++T+ ++++++ ++ + FH E E+ + + ++ NRA + + +I
Sbjct: 139 HDEDAGRVVLTLRIQLLDSEAGEVLTTRRFHAEVTAERRHPVAGAKAANRALAELLPQIT 198
Query: 197 D 197
D
Sbjct: 199 D 199
>gi|16126560|ref|NP_421124.1| hypothetical protein CC_2321 [Caulobacter crescentus CB15]
gi|221235342|ref|YP_002517779.1| membrane lipoprotein [Caulobacter crescentus NA1000]
gi|13423844|gb|AAK24292.1| hypothetical protein CC_2321 [Caulobacter crescentus CB15]
gi|220964515|gb|ACL95871.1| membrane lipoprotein [Caulobacter crescentus NA1000]
Length = 216
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/213 (16%), Positives = 96/213 (45%), Gaps = 9/213 (4%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSC---FFHNNPVNIYDLTES-TKYDESVQRHIQLIIT 60
+N+ +++ A L SLS+C F + P +Y ++ + + + ++
Sbjct: 4 MNRKAPRRVAKVVAATALALSLSACISVFPESEPATLYRFGQADVGVPKGPKGAVFSVLK 63
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P T ++ D ++ S+ E+ Y+ ++W + + + + F+ + + ++ +
Sbjct: 64 APTTFTRASAGDRLLTSTRGEVAYIADARWVSPAFVLFEEAVASAFQTDQGRARLIGRGE 123
Query: 121 GIYADYQIISAIRSFE---INIDRHCAIITMSLK-IINA-HDNSLVGQKVFHVEEKLEKD 175
AD + +++FE +N + + + ++ ++N D +LV +VF K + +
Sbjct: 124 IAKADLVLRLEVQTFEAQYVNGPKSAPEVVVRVRGVLNRNQDRTLVSDQVFEARVKADDN 183
Query: 176 NKLHFIQSLNRAFSRISSEIIDWTLSSLPLSDN 208
+ + ++A +++ E++ W ++ P N
Sbjct: 184 RVSAIVPAYDQAVAQVLGEVVTWVNATGPAIQN 216
>gi|94496557|ref|ZP_01303133.1| hypothetical protein SKA58_17672 [Sphingomonas sp. SKA58]
gi|94423917|gb|EAT08942.1| hypothetical protein SKA58_17672 [Sphingomonas sp. SKA58]
Length = 203
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 76/182 (41%), Gaps = 12/182 (6%)
Query: 26 LSSC--FFHNNPVNIYDLTESTKYDESVQR----HIQLIITEPITEKILNSEDIIVRSSP 79
LS C F P + L + K R LI+TEP K +++ + V++SP
Sbjct: 19 LSGCVSFGGKPPERLLSLDAAHKVPSGTPRVAGNGRTLIVTEPEAPKTVDTVRVPVQTSP 78
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY---ADYQIISAIRSFE 136
+ Y+ QW+D PR + +L+A E + V + G + ++ + F
Sbjct: 79 TSVAYVTDVQWADT-PRHLFRRLLA--ETISATTDRVVLDTGQFSGDGGQRLTGELIDFG 135
Query: 137 INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
I+ + AI+T ++ +L Q+ K N LN A +++++++
Sbjct: 136 IDEAQQSAIVTYDAMLMTPSGVALARQRFTASAPVGGKINATSVGAPLNAAANQVATDVA 195
Query: 197 DW 198
W
Sbjct: 196 AW 197
>gi|270159821|ref|ZP_06188477.1| putative lipoprotein [Legionella longbeachae D-4968]
gi|289165421|ref|YP_003455559.1| hypothetical protein LLO_2088 [Legionella longbeachae NSW150]
gi|269988160|gb|EEZ94415.1| putative lipoprotein [Legionella longbeachae D-4968]
gi|288858594|emb|CBJ12475.1| Conserved hypothetical protein [Legionella longbeachae NSW150]
Length = 199
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 84/199 (42%), Gaps = 13/199 (6%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNI-----YDLTE-STKYDESVQRHIQLIITEPIT 64
KK+ C L L LS+C +PV I Y L+ S K I L++T P
Sbjct: 2 KKLAVCLLG-LSAVILSAC----SPVRISVKDQYQLSAFSAKQLAKKPMPITLLVTAPDA 56
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+E ++ P E++ + W + M+ ++ + + V + A
Sbjct: 57 AGGYQTEQMLYIKRPYELEAFAKNAWVNPPADMLYPLILQSLQKTNLFEAVTSNAYALGA 116
Query: 125 DYQIISAIRSFEINIDRHCAIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQ 182
DY++ S + N + ++I S+KI+ H DN ++G ++ ++ D +
Sbjct: 117 DYRLDSQLLYLNQNFLKKPSVIEFSVKIVLTHVSDNKILGSRIINLSVPCPSDTPYGGVI 176
Query: 183 SLNRAFSRISSEIIDWTLS 201
+ N+A ++E+ + +S
Sbjct: 177 AANKATQIFTAELAHFVVS 195
>gi|294010010|ref|YP_003543470.1| ABC-type transport system auxiliary component (lipoprotein)
[Sphingobium japonicum UT26S]
gi|139001581|dbj|BAF51701.1| putative lipoprotein [Sphingobium japonicum]
gi|292673340|dbj|BAI94858.1| ABC-type transport system auxiliary component (lipoprotein)
[Sphingobium japonicum UT26S]
Length = 202
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 8/193 (4%)
Query: 17 SLAVLLCTSLSSC--FFHNNPVNIYDLTESTKYDESVQR----HIQLIITEPITEKILNS 70
LA + L+ C F P + L + K R + + +P K+L++
Sbjct: 9 GLAAVGALMLAGCVSFGGKPPERLLSLNAAQKVAPGTLRSASSGTSITVADPEAPKMLDT 68
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ-GIYADYQII 129
+ V +SP + Y+ QW+D PR + KL+A V+ P Q A +++
Sbjct: 69 VRVPVITSPTSVAYVTKVQWADT-PRHLFQKLLAETIAATSNRIVLDPGQYSADAGQRLM 127
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ F ++ + A++T + ++ Q+ K + LN A +
Sbjct: 128 GELVDFGVDEASNSAVVTYDAMLAGPGGTAIAKQRFTASAPIGGKIDANSVGAPLNAAAN 187
Query: 190 RISSEIIDWTLSS 202
++++++ W SS
Sbjct: 188 KVAADVAAWLASS 200
>gi|307545042|ref|YP_003897521.1| hypothetical protein HELO_2452 [Halomonas elongata DSM 2581]
gi|307217066|emb|CBV42336.1| K09857 hypothetical protein [Halomonas elongata DSM 2581]
Length = 196
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 21/193 (10%)
Query: 13 IISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ-LIITEPIT-EKILNS 70
+ + SLA L LS C P Y L ++ D+++ + L++ PI + L+
Sbjct: 7 LFAASLAALW---LSGCATGGTPPTHYTLPDAPLADDAIDASTERLLVIRPIRLARYLDV 63
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII- 129
E I+ + I +Q G QW++ L R ++ L +++T + P+ I D
Sbjct: 64 EGIVFQLDDITVQQAKGHQWAEPLGRQLERGL------RDRLATRL-PDTRIMLDGDTAR 116
Query: 130 -SAIRSFEINIDR------HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
A S + +DR A+ ++ +A L+ F + LE D +Q
Sbjct: 117 GDAPLSLRLEMDRFQGRHDGMAVAEGRWQLRDAS-GELLALTPFSLTTPLEADGYPALVQ 175
Query: 183 SLNRAFSRISSEI 195
+L + R++ +
Sbjct: 176 ALGQDLDRLADRL 188
>gi|56551911|ref|YP_162750.1| hypothetical protein ZMO1015 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761773|ref|ZP_04759859.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260752533|ref|YP_003225426.1| hypothetical protein Za10_0290 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543485|gb|AAV89639.1| protein of unknown function DUF330 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241373687|gb|EER63247.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258551896|gb|ACV74842.1| protein of unknown function DUF330 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 208
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 6/169 (3%)
Query: 35 PVNIYDLTESTKYDES---VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWS 91
P N+ LT S + Q L++ P L I V +SP + YL W
Sbjct: 30 PKNLLTLTSSAAPAANSDLTQNKPLLLVVPPAVPAELKVTRIPVTTSPTTVAYLTDGVWV 89
Query: 92 DKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMS-- 149
D R+ L ++ VV A Y + + +F ++ H +++
Sbjct: 90 DLPSRLFSNILSTTIASHNHF-MVVNYRAATGAAYHLTGNLTAFGLDAAHHQIVVSYDAF 148
Query: 150 LKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
L+ H V + F + + +K + + +LN A ++++ ++ DW
Sbjct: 149 LRGSKDHRTETVTSRHFEIRQPAQKQDAVSVANNLNTAANQMAGQVADW 197
>gi|75675225|ref|YP_317646.1| ABC transporter substrate-binding protein [Nitrobacter winogradskyi
Nb-255]
gi|74420095|gb|ABA04294.1| ABC transporter substrate-binding protein [Nitrobacter winogradskyi
Nb-255]
Length = 101
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 5/99 (5%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMS 149
W+D +P ++Q KL+ +FEN ++ G+ AD+Q++ +R F+I D + +
Sbjct: 2 WADSIPNLLQAKLLESFENYDIAHAPLRSMDGVQADHQLLIDVRRFQITTDPE-PVADIG 60
Query: 150 LKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
L D +V ++F +KL + N AF
Sbjct: 61 LN----KDVKVVAARLFEETQKLRTIEPDTASAAFNEAF 95
>gi|197120795|ref|YP_002132746.1| ABC transporter [Anaeromyxobacter sp. K]
gi|196170644|gb|ACG71617.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Anaeromyxobacter sp. K]
Length = 220
Score = 43.5 bits (101), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/148 (18%), Positives = 61/148 (41%), Gaps = 6/148 (4%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L++ P + I E+Q+ S+W D RM+ L+ E +G V
Sbjct: 52 LVVAVPTAAAGFDGPRIAYVRRAHELQFFARSEWVDAPARMLAPLLVQALERSGGFQAVA 111
Query: 117 KPN----QGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKL 172
G+ + +++ + F + R +T+ +++ + ++G + E+
Sbjct: 112 GARTPAAAGLRLESELVRLQQEFTVRPSR--VRLTLRVQLSDVASRRVLGTRELEAVEEA 169
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDWTL 200
D+ +++ NRA R+ E++ + L
Sbjct: 170 RSDDPYGGVEAANRAVRRLLDEVVAYCL 197
>gi|85707664|ref|ZP_01038730.1| hypothetical protein NAP1_00475 [Erythrobacter sp. NAP1]
gi|85689198|gb|EAQ29201.1| hypothetical protein NAP1_00475 [Erythrobacter sp. NAP1]
Length = 203
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/195 (18%), Positives = 75/195 (38%), Gaps = 8/195 (4%)
Query: 12 KIISCSLAVLLCTSLSSC-----FFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK 66
++ SLA+ C SL P + ++ + + ++T + K
Sbjct: 10 ALVGASLALSACVSLGGAEPPESLLSLTPTAMAPAGSGASHNRAGESSAIAVLTPEVPAK 69
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
L+ + + V S EI YL + W +K R+ + L G + + + A
Sbjct: 70 -LDVQRVPVNVSDTEIAYLQEAVWVEKPARLFRRLLGETLRTRGSMLVLDGEDSPTVATR 128
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ ++ E+ D + + +S I D+ V + F E+ +LNR
Sbjct: 129 YLRGSL--IELGYDAPTSSVVVSFNAILTSDDGTVTSRRFEAREEGILAEASDVGPALNR 186
Query: 187 AFSRISSEIIDWTLS 201
A + ++ E+ DW ++
Sbjct: 187 AANTLAGEVADWAIA 201
>gi|88810289|ref|ZP_01125546.1| hypothetical protein NB231_14453 [Nitrococcus mobilis Nb-231]
gi|88791919|gb|EAR23029.1| hypothetical protein NB231_14453 [Nitrococcus mobilis Nb-231]
Length = 156
Score = 41.6 bits (96), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/142 (17%), Positives = 61/142 (42%), Gaps = 3/142 (2%)
Query: 58 IITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
++ P ++ + R +P EI+Y S+W D RM++ L + G +
Sbjct: 1 MVEPPQVAAGYDTTAMAYRRTPWEIRYYSLSRWVDDPARMLREALTSALNQLGPFRSAFA 60
Query: 118 PNQGIYADYQIISAIRSFE---INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
GI DY + + + E N + + ++++N ++L+ +V +
Sbjct: 61 SPAGIAVDYSLRTELLRLEQDFSNAPPSRERLVVRVQLVNLAHDTLLASQVLELNTTAPS 120
Query: 175 DNKLHFIQSLNRAFSRISSEII 196
++ + + N A ++++E++
Sbjct: 121 EDAYGGVVAANTALQQLAAEVV 142
>gi|82702736|ref|YP_412302.1| hypothetical protein Nmul_A1609 [Nitrosospira multiformis ATCC
25196]
gi|82410801|gb|ABB74910.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 220
Score = 41.6 bits (96), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 77/187 (41%), Gaps = 5/187 (2%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDIIVR 76
A+LL S S + IY L + S + L + P + I +S ++
Sbjct: 22 AMLLLVSSCSILPATENLEIYQLPAAEFAPRSSGSPLPWTLRLATPHSNYITDSPRVLAL 81
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA-IRSF 135
++ G +WSD +P +++ +L F +G+ ++++ N + + +F
Sbjct: 82 RQGSQLSSYKGIRWSDPVPVLLRNRLAGAFRADGRFNSIINGNNNNLIANLELGGDLSAF 141
Query: 136 EINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
++ D A I + N +V + F V E ++ I + A R ++
Sbjct: 142 QVEYTNDGPQATIYFYATLSQPLRNRIVAVRRFEVGEPVQSRGTSGIITAFGVAADRFAA 201
Query: 194 EIIDWTL 200
EI+DWT+
Sbjct: 202 EIVDWTV 208
>gi|83309428|ref|YP_419692.1| ABC transporter [Magnetospirillum magneticum AMB-1]
gi|82944269|dbj|BAE49133.1| ABC-type uncharacterized transport system [Magnetospirillum
magneticum AMB-1]
Length = 197
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 34/72 (47%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMS 149
WS+ ++Q +L G VV P + AD+ + +R FE DR A++ +
Sbjct: 83 WSEPPGLLLQDRLAHYLAAAGIADKVVTPELRVLADWVLRGKVRRFEQIADRAEAVVDLE 142
Query: 150 LKIINAHDNSLV 161
L ++ A D LV
Sbjct: 143 LAVVRARDGRLV 154
>gi|182416426|ref|YP_001821492.1| hypothetical protein Oter_4622 [Opitutus terrae PB90-1]
gi|177843640|gb|ACB77892.1| protein of unknown function DUF330 [Opitutus terrae PB90-1]
Length = 214
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 85/195 (43%), Gaps = 13/195 (6%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT------ESTKYDESVQRHIQLIITEPIT 64
K ++ SL V + T S + Y LT E K E+ R +++ +
Sbjct: 20 KPALAGSLLVGMLTGCSLPEAQPDLTRFYVLTPTLAAAEMAKPAEAAPR---VLLRGVMV 76
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+ L + + VR S E++Y+ ++W++ L +Q L + E +G++ V + ++
Sbjct: 77 PEFLRGKIMPVRLSDTELRYIDQARWAEPLEAGLQRTLKVDLERSGRVRVVGRGSE--PH 134
Query: 125 DYQIISAIRSFEINIDRHCAIITMSLKIINAH-DNSLVGQKVFHVE-EKLEKDNKLHFIQ 182
D++I +R E + A + +++ + + LV Q F E + N +
Sbjct: 135 DFEIALQVRQCEGVVPGRVARLAARIEVYSGDVEAKLVAQDEFTTEIAGWDGANHAELAK 194
Query: 183 SLNRAFSRISSEIID 197
L+ A ++++ + D
Sbjct: 195 KLSEAAAQLAQRVAD 209
>gi|317056897|ref|YP_004105364.1| hypothetical protein Rumal_2244 [Ruminococcus albus 7]
gi|315449166|gb|ADU22730.1| protein of unknown function DUF214 [Ruminococcus albus 7]
Length = 671
Score = 39.7 bits (91), Expect = 0.23, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 34 NPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSD 92
+ ++++ T ++YD++V I L + T ++ +D+I SSP+E++Y IG+ SD
Sbjct: 446 DEISVFGRTLRSQYDDTVDGFITLDVARTNTGIVIVPDDVITGSSPLEMEYFIGNYLSD 504
>gi|144898321|emb|CAM75185.1| ABC-type uncharacterized transport system, auxiliary component
[Magnetospirillum gryphiswaldense MSR-1]
Length = 194
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/155 (19%), Positives = 64/155 (41%), Gaps = 2/155 (1%)
Query: 17 SLAVLLCTSLSSCFFHNNPVN-IYDLTESTKYDESVQRHIQLI-ITEPITEKILNSEDII 74
SL L +L++C P + Y L + +I ++ P T+ +L+ +
Sbjct: 5 SLIAALAVTLAACAQQAPPKDRFYRLETPPVAARFAAPSLGVIEVSRPTTDGVLSERPLA 64
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+ + W++ ++Q L+ + +G TV+ P + D+ I +
Sbjct: 65 YQDGDGTLGRYRYDLWAEPPTALLQNALVDSLRLSGISHTVITPETRVPPDWMIRGRLNR 124
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVE 169
FE+ + + L ++++ D SL+ K + VE
Sbjct: 125 FEMLAGAGKVVANVELAVVSSRDGSLLLLKTYQVE 159
>gi|307297004|ref|ZP_07576820.1| protein of unknown function DUF330 [Sphingobium chlorophenolicum
L-1]
gi|306877530|gb|EFN08758.1| protein of unknown function DUF330 [Sphingobium chlorophenolicum
L-1]
Length = 200
Score = 38.5 bits (88), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 63/155 (40%), Gaps = 8/155 (5%)
Query: 17 SLAVLLCTSLSSC--FFHNNPVNIYDLTESTKYDESVQR----HIQLIITEPITEKILNS 70
LA + L+ C F P + L + K R + + +P K+L++
Sbjct: 7 GLAAVGALMLAGCVSFGGKPPERLLSLNAAQKVAPGTLRSASSGTAITVADPEAPKMLDT 66
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ-GIYADYQII 129
+ V +SP + Y+ QW+D PR + KL+A V+ P Q A +++
Sbjct: 67 VRVPVITSPTSVAYVTKVQWADT-PRHLFQKLLAETIAATSSRIVLDPGQYSADAGQRLM 125
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQK 164
+ F ++ + A++T + ++ Q+
Sbjct: 126 GELVDFGLDEASNSAVVTYDAMLAGPGGTAIAKQR 160
>gi|160871905|ref|ZP_02062037.1| conserved hypothetical protein [Rickettsiella grylli]
gi|159120704|gb|EDP46042.1| conserved hypothetical protein [Rickettsiella grylli]
Length = 218
Score = 38.1 bits (87), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 89/211 (42%), Gaps = 13/211 (6%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNN----PVNIYDLT-ESTKYDESVQRHI 55
+KK N II II C LA LL LS+C P + + L D +QR
Sbjct: 9 FNKKNNFIIA--IIVCFLAFLL---LSACSLFEPIKIPPTHYFTLAIPDPNGDCPIQRGC 63
Query: 56 Q-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST 114
+ +++ +P + N+ +I + +IQY ++W M+ LI ++ G
Sbjct: 64 RTILVNQPRVNAVYNTSRMIYIPACYQIQYFSQNRWVGTPAEMLHPLLINALQHTGYFQA 123
Query: 115 VVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKL 172
++ D+ + + + SF+ + ++++ +I+A ++ + F E
Sbjct: 124 IINTPSTTDYDWVLNTQLLSFQQEFIYFPSRFRIAIRAQLIDARSRHILATQDFVAVEIA 183
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
D+ + N A +I +EI + L +L
Sbjct: 184 PHDDPYGGTLAANSAIQKILNEINCFCLKNL 214
>gi|83648820|ref|YP_437255.1| hypothetical protein HCH_06186 [Hahella chejuensis KCTC 2396]
gi|83636863|gb|ABC32830.1| hypothetical protein HCH_06186 [Hahella chejuensis KCTC 2396]
Length = 148
Score = 38.1 bits (87), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 10/117 (8%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITE--PITEKIL 68
K II +L++ L S+ C ++ PV YD + S+++ I E PI +L
Sbjct: 2 KSIIKLALSIALNASILGCATYSQPVRFYDASSCEYRITSLRQDIHTCYGEAFPIEYAVL 61
Query: 69 ---NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
S+D I R +++ L G W + R I + +A+ NN T VK Q +
Sbjct: 62 VAAQSDDQIFRG---QLKTLAGFDWEHE--RAILITALASKANNDGYHTDVKTAQDV 113
>gi|239787373|emb|CAX83849.1| ABC-type uncharacterized transport system, auxiliary component
[uncultured bacterium]
Length = 196
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/107 (21%), Positives = 48/107 (44%), Gaps = 1/107 (0%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC-AIITM 148
W++ RM+Q L+ + + S V+ + + + + FE + +I
Sbjct: 83 WTEAPGRMLQQHLVKSLNDAKAASQVLTDEVKVEGVWLLKGRLLHFEQVLGGQPKVVIEA 142
Query: 149 SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ ++ A D SLV ++ EE + D+ + ++ +AF R+S I
Sbjct: 143 DMTLMKAKDYSLVHHGLYREEEPAQGDSPAAAVDAMQKAFERLSQRI 189
>gi|321461591|gb|EFX72621.1| hypothetical protein DAPPUDRAFT_110456 [Daphnia pulex]
Length = 162
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 85 LIGSQWSDKLPRMIQLKLIANFEN-----------NGKISTVVKPNQGIYADYQIISAIR 133
L+ S++ L R L+ +N EN N K + Q IY D+ + A
Sbjct: 39 LMASKYGSSLYRAFLLREFSN-ENLEFWLAVEEYKNSKPQKMAAKAQQIYNDFVAVQA-- 95
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
S E+N+D +IT++ N D + + ++ +E+D+ L F+QS
Sbjct: 96 SKEVNLDSETRLITLTNVQSNNPDQHVFDRAQRRIQHMMERDSYLRFLQS 145
>gi|332187462|ref|ZP_08389200.1| hypothetical protein SUS17_2543 [Sphingomonas sp. S17]
gi|332012623|gb|EGI54690.1| hypothetical protein SUS17_2543 [Sphingomonas sp. S17]
Length = 186
Score = 36.6 bits (83), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/180 (16%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 26 LSSC--FFHNNPVNIYDL----TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
L+ C F P ++ L + + R + I P T + L + + V+ +
Sbjct: 6 LAGCISFGAKPPPSLMTLQAQSAPTVGQTQDSARAKSITIQVPTTPQELATARVPVQENA 65
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY-ADYQIISAIRSFEIN 138
I Y+ +QW++ R+ +L+++ + V+ + + + ++ +R F ++
Sbjct: 66 TSIAYVKDAQWAEPPARLF-ARLVSDTLTAREGRVVLSARESVVDSGDRLAGELRQFGMD 124
Query: 139 IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
RH A++ ++ + + + ++ F + K + +LN+A ++++ ++ DW
Sbjct: 125 AVRHDAVVIFDASLMR-NGQTAIEKRRFEARVPVGKIDAQSVGPALNQAANQVAQQVADW 183
>gi|84387809|ref|ZP_00990824.1| hypothetical protein V12B01_07448 [Vibrio splendidus 12B01]
gi|84377324|gb|EAP94192.1| hypothetical protein V12B01_07448 [Vibrio splendidus 12B01]
Length = 164
Score = 36.6 bits (83), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 35 PVNIYDLTESTK--YDESVQRHIQLIITEPITEK--ILNSEDIIVRSSPIEIQYLIGSQW 90
P LT+ K Y E+ H QL+ + I K +L+ + I+R S +I Y IGSQ
Sbjct: 85 PATFSQLTDDGKTLYGEADDLHYQLVADKLIMTKNAMLSQDGSIIRGS--KITYQIGSQ- 141
Query: 91 SDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
KL+A+ N ++STV++P +
Sbjct: 142 ----------KLVADSGENKRVSTVLQPTE 161
>gi|148977772|ref|ZP_01814328.1| hypothetical protein VSWAT3_21295 [Vibrionales bacterium SWAT-3]
gi|145962986|gb|EDK28256.1| hypothetical protein VSWAT3_21295 [Vibrionales bacterium SWAT-3]
Length = 164
Score = 36.6 bits (83), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 17/90 (18%)
Query: 35 PVNIYDLTESTK--YDESVQRHIQLIITEPITEK--ILNSEDIIVRSSPIEIQYLIGSQW 90
P LT+ K Y E+ H QL+ + I K +L+ + I+R S +I Y IGSQ
Sbjct: 85 PATFSQLTDDGKTLYGEADDLHYQLVADKLIMTKNAMLSQDGSIIRGS--KITYQIGSQ- 141
Query: 91 SDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
KL+A+ N ++STV++P +
Sbjct: 142 ----------KLVADSGENKRVSTVLQPTE 161
>gi|308272471|emb|CBX29075.1| hypothetical protein N47_J00560 [uncultured Desulfobacterium sp.]
Length = 200
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/144 (19%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
+ NS+ I R + + + +W R++ L + +N+G V G A +
Sbjct: 53 LYNSDKISYRKNDFQTDEYLYHRWETDPARLVSYFLFRDIKNSGLFKGVFTYEAGFPATH 112
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNS------LVGQKVFHVEEKLEKDNKLHF 180
+ + F + +SL I+ +N ++ QK + ++ K N
Sbjct: 113 SVSGTVDEFFEDDRGKTWEAVLSLDIVLMAENEPDLSKKILFQKKYSTRKECAKKNPKAL 172
Query: 181 IQSLNRAFSRISSEIIDWTLSSLP 204
+++++A +S +II+ SLP
Sbjct: 173 AEAMSKAMQELSGQIINDIYKSLP 196
>gi|255553538|ref|XP_002517810.1| conserved hypothetical protein [Ricinus communis]
gi|223543082|gb|EEF44617.1| conserved hypothetical protein [Ricinus communis]
Length = 1025
Score = 35.8 bits (81), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 23/150 (15%)
Query: 33 NNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDII-VRSSPIEIQYLIGSQWS 91
NNP + L S +V+RH I TE IT L + ++ +R + +I L+ S W+
Sbjct: 581 NNPSMLNRLKSSYSRAYTVKRHTSPITTEEITRSSLGKKQVMSLRLNSHQITLLLSSIWA 640
Query: 92 DKLPRMIQLKLIANFENNGKISTVV--------KPNQGIYADYQIISAIRSFEIN----- 138
L L AN+E ++V N+ + +Q+ ++RSF I
Sbjct: 641 QSLS---PLNTPANYEAIAHTYSLVLLFARTKNSSNETLIRSFQLAFSLRSFAIGGGPLQ 697
Query: 139 IDRHCAIITMSLKIINAHDNSLVGQKVFHV 168
R ++ T+S +I L K F++
Sbjct: 698 PSRRRSLFTLSTSMI------LFSSKAFNI 721
>gi|254292869|ref|YP_003058892.1| hypothetical protein Hbal_0493 [Hirschia baltica ATCC 49814]
gi|254041400|gb|ACT58195.1| hypothetical protein Hbal_0493 [Hirschia baltica ATCC 49814]
Length = 255
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/120 (19%), Positives = 50/120 (41%)
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
IQY+ +W+D R+ Q ++ + V G +Y + +I ++ ++
Sbjct: 80 IQYINDVRWADSPARLFQAAVVDALTVSEGDGLAVPVQVGARGEYDLRLSILDLTVDNEK 139
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
A+ + + + + D S++ V E LE + ++L RA S + D+ +
Sbjct: 140 EEAVCKVRVVLTRSGDKSIIASDVLQAVELLENKKSVDRAEALARAISNAAEITADFVAT 199
>gi|301111053|ref|XP_002904606.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262095923|gb|EEY53975.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 4063
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 6/65 (9%)
Query: 21 LLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDI---IVRS 77
++C S S FFH +P I T ST+ E + + ++ T+P+T K L+ + + +++S
Sbjct: 3756 VVCHSSSGSFFHRSPSTI---TVSTRKVEPLGGYSLVLTTQPLTRKPLDKDAVQLLLLKS 3812
Query: 78 SPIEI 82
+P E+
Sbjct: 3813 TPSEL 3817
>gi|149190589|ref|ZP_01868858.1| hypothetical protein VSAK1_01949 [Vibrio shilonii AK1]
gi|148835587|gb|EDL52555.1| hypothetical protein VSAK1_01949 [Vibrio shilonii AK1]
Length = 165
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 21/81 (25%)
Query: 45 TKYDESVQRHI-----QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQ 99
T Y E+ Q H QL +T + +L+ +D I+R S I+ Y I SQ
Sbjct: 97 TLYGEAKQLHYSLKNDQLTMT---NKAMLSQDDSIIRGSVIK--YRISSQ---------- 141
Query: 100 LKLIANFENNGKISTVVKPNQ 120
KLIA+ ++ G++STV++P Q
Sbjct: 142 -KLIADGDSKGRVSTVLQPQQ 161
>gi|28210240|ref|NP_781184.1| internalin A-like protein/putative S-layer protein [Clostridium
tetani E88]
gi|28202676|gb|AAO35121.1| internalin A-like protein/putative S-layer protein [Clostridium
tetani E88]
Length = 706
Score = 35.0 bits (79), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 17/106 (16%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCF--------FHNNPVNIYDLTESTKY-DESVQRH 54
K N + KKKI L L T++ F F N+ V+ YDL E K+ D+++++
Sbjct: 14 KANFMRKKKITIILLTAFLTTTIVPAFGVTMQGNNFINSKVHAYDLEEGIKFPDKALEKV 73
Query: 55 IQLIITEPIT--EK--ILNSEDIIVRSSPIE----IQYLIGSQWSD 92
I+ I +P+ EK + N ++ +R+ I+ IQYL G Q D
Sbjct: 74 IREKINKPVGPIEKSDLSNISELDIRNKAIKSIEGIQYLTGLQTID 119
>gi|307720551|ref|YP_003891691.1| hypothetical protein Saut_0630 [Sulfurimonas autotrophica DSM
16294]
gi|306978644|gb|ADN08679.1| conserved hypothetical protein [Sulfurimonas autotrophica DSM
16294]
Length = 205
Score = 34.7 bits (78), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
I + +IN + +V K FH +EK +N L +++L A ++I E W
Sbjct: 145 IAFTCSLINTATHKIVATKTFHAKEKTSSNNALGGVKALESALNKILKECGLW 197
Searching..................................................done
Results from round 2
>gi|254780141|ref|YP_003064554.1| putative ABC transporter protein [Candidatus Liberibacter asiaticus
str. psy62]
gi|254039818|gb|ACT56614.1| putative ABC transporter protein [Candidatus Liberibacter asiaticus
str. psy62]
Length = 208
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT
Sbjct: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ
Sbjct: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
Query: 121 GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF
Sbjct: 121 GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
Query: 181 IQSLNRAFSRISSEIIDWTLSSLPLSDN 208
IQSLNRAFSRISSEIIDWTLSSLPLSDN
Sbjct: 181 IQSLNRAFSRISSEIIDWTLSSLPLSDN 208
>gi|315122743|ref|YP_004063232.1| putative ABC transporter protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313496145|gb|ADR52744.1| putative ABC transporter protein [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 202
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 139/204 (68%), Positives = 169/204 (82%), Gaps = 2/204 (0%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
MDKKL KI K + C A+ LC LSSCF N P NI+DLTESTK+++S+Q +++L I
Sbjct: 1 MDKKLKKITKNMRL-CIPAISLCMFLSSCF-GNIPKNIFDLTESTKHNQSIQHNVRLTIN 58
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
EP+T K L+S DIIVRSSP+EIQYLIGSQWSD+LPRM+QLKLIANFENNGKIST++KPNQ
Sbjct: 59 EPVTSKTLDSPDIIVRSSPVEIQYLIGSQWSDRLPRMVQLKLIANFENNGKISTIIKPNQ 118
Query: 121 GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
GIY +YQI S IR+FEI+I H AII +SLKII+ + +++ QKVFHVEE E+DNKL F
Sbjct: 119 GIYPNYQISSIIRAFEIDIHHHYAIIEISLKIIDINTGNIIAQKVFHVEEAFEEDNKLCF 178
Query: 181 IQSLNRAFSRISSEIIDWTLSSLP 204
I+SLNRAFSRISSEII+WT+SSLP
Sbjct: 179 IESLNRAFSRISSEIINWTVSSLP 202
>gi|116252404|ref|YP_768242.1| hypothetical protein RL2658 [Rhizobium leguminosarum bv. viciae
3841]
gi|115257052|emb|CAK08146.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 203
Score = 209 bits (531), Expect = 2e-52, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL + + Q++I P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAK-NDTYDLPAAVDGSGPAAKSRQILIASPTALRSL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPR++Q KL+ FEN+GK+ V P QG+ DYQI
Sbjct: 69 DSEQIVIRVSPSEIQYLSKAQWGDKLPRIVQSKLVEAFENSGKLGGVGMPGQGLAIDYQI 128
Query: 129 ISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S KI+N + S+ QKVF DN F++ L+RA
Sbjct: 129 VTDIRSFEIDASHGNQAVVEISAKILNDRNGSVRAQKVFRAMAPAGGDN-DGFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS ++SEI+ WTL S+
Sbjct: 188 FSTVASEIVSWTLRSI 203
>gi|241204912|ref|YP_002976008.1| hypothetical protein Rleg_2192 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858802|gb|ACS56469.1| protein of unknown function DUF330 [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 203
Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL + + Q++I P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAK-NDTYDLPAAVDGSGPAAKSRQILIASPTALRSL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPR++Q KL+ FEN+GK+ V P QG+ DYQI
Sbjct: 69 DSEQIVIRVSPSEIQYLSKAQWGDKLPRIVQSKLVEAFENSGKLGGVGMPGQGLAIDYQI 128
Query: 129 ISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S KI+N + S+ QKVF DN F++ L+RA
Sbjct: 129 VTDIRSFEIDASRGNQAVVEISAKILNDRNGSVRAQKVFRAMAPAGGDN-DGFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS ++SEI+ WTL S+
Sbjct: 188 FSTVASEIVTWTLRSI 203
>gi|86357961|ref|YP_469853.1| putative ABC transporter protein [Rhizobium etli CFN 42]
gi|86282063|gb|ABC91126.1| putative ABC transporter protein [Rhizobium etli CFN 42]
Length = 203
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 117/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL+ + D + Q++I P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAK-NDTYDLSGAVDGDGPAAKSRQILIAGPTALRAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPR++Q KL+ FEN+GK+ V P QG+ DYQI
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDKLPRIVQSKLVEAFENSGKLGGVGMPGQGLAIDYQI 128
Query: 129 ISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S KI+N + S+ QKVF DN F++ L+RA
Sbjct: 129 VTDIRSFEIDASNGNQAVVEISAKILNDRNGSVRAQKVFRAMAPAGGDNV-GFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
F+ + SEI+ WTL S+
Sbjct: 188 FAAVVSEIVSWTLRSI 203
>gi|218461268|ref|ZP_03501359.1| putative ABC transporter protein [Rhizobium etli Kim 5]
Length = 203
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 78/196 (39%), Positives = 117/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL + D + Q++I P K L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAK-NDTYDLAGAVDGDGPAAKTRQILIAGPTALKAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW D+LPR++Q KL+ FEN+GK+ V P QG+ DYQI
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDRLPRIVQSKLVEAFENSGKVGGVGMPGQGLAIDYQI 128
Query: 129 ISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S KI+N + ++ QKVF DN F++ L+RA
Sbjct: 129 VTDIRSFEIDASNGNQAVVEISAKILNDRNGTVRAQKVFRAMAPAGGDNV-AFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
F+ + SEI++WTL S+
Sbjct: 188 FAAVVSEIVNWTLRSI 203
>gi|209549575|ref|YP_002281492.1| ABC transporter [Rhizobium leguminosarum bv. trifolii WSM2304]
gi|209535331|gb|ACI55266.1| putative ABC transporter protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 203
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL+ + D + Q++I P +
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAK-NDTYDLSAAVDGDGPAAKSRQILIASPTALNAV 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
SE I++R SP EIQYL +QW DKLPRM+Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 GSEQIVIRVSPSEIQYLSRAQWGDKLPRMVQSKLVEAFENSGKLGGVGIPGQGLAIDYQV 128
Query: 129 ISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S KI+N + S+ QKVF DN F++ L+RA
Sbjct: 129 VTDIRSFEIDASNGNQAVVEISAKILNDRNGSVRAQKVFRAVAPAGGDN-AGFVKGLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS + SEI++WTL S+
Sbjct: 188 FSTVVSEIVNWTLRSI 203
>gi|239831968|ref|ZP_04680297.1| lipoprotein [Ochrobactrum intermedium LMG 3301]
gi|239824235|gb|EEQ95803.1| lipoprotein [Ochrobactrum intermedium LMG 3301]
Length = 209
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 113/204 (55%), Gaps = 6/204 (2%)
Query: 5 LNKIIKKKII--SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITE 61
N + ++++ + S+ + L+ C P++ ++L+ S R ++QL++
Sbjct: 7 FNDMKSRRVVLRTASVPFIFGLLLAGCGT-TTPLDTFNLSAPQPGVTSPSRKNVQLLVPT 65
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN G + +P G
Sbjct: 66 PTALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGIFGGIGRPGDG 125
Query: 122 IYADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ +YQI++ +R F I A++ ++++++N + + +VF +
Sbjct: 126 LAINYQILTDLRMFGIQAYASPKLAVVELAVRLMNDKNGEVRATRVFRTAIPVGGATNAA 185
Query: 180 FIQSLNRAFSRISSEIIDWTLSSL 203
++++L+ AF R +SEI+ WT+++L
Sbjct: 186 YVKALDAAFERTASEIVSWTVTTL 209
>gi|153009440|ref|YP_001370655.1| lipoprotein [Ochrobactrum anthropi ATCC 49188]
gi|151561328|gb|ABS14826.1| lipoprotein, hypothetical [Ochrobactrum anthropi ATCC 49188]
Length = 209
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 109/197 (55%), Gaps = 4/197 (2%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKIL 68
+ + S+ VLL L+ C P++ ++L+ S R + QL++ P K L
Sbjct: 14 RTLCRTTSICVLLSILLAGCGT-TTPLDTFNLSAPQPGVSSPSRKNTQLLVPTPTALKAL 72
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN G + +P G+ +YQI
Sbjct: 73 DSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGVFGGIGRPGDGLAINYQI 132
Query: 129 ISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
++ +R F I A++ +++K++N + + +VF + ++++L+
Sbjct: 133 LTDLRMFGIQAYASPKLAVVELAVKLMNDKNGEVRATRVFRTAIPVSGATNAAYVKALDA 192
Query: 187 AFSRISSEIIDWTLSSL 203
AF R +SEI+ WT+++L
Sbjct: 193 AFERTASEIVSWTVTAL 209
>gi|327190643|gb|EGE57731.1| putative ABC transporter protein [Rhizobium etli CNPAF512]
Length = 203
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + +DL+ + D + Q+++ P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAK-NDTFDLSGAVDGDGPAAKSRQILVAGPTALRAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPRM+Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDKLPRMVQSKLVEAFENSGKLGGVGLPGQGLAIDYQV 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S+KI+N + S+ QKVF DN F++SL+RA
Sbjct: 129 VTDIRSFEIDASSGNQAVVEISVKILNDRNGSVRAQKVFRATAPAGGDN-AGFVKSLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS + SEI+ WTL S+
Sbjct: 188 FSTVVSEIVSWTLRSI 203
>gi|306838382|ref|ZP_07471227.1| lipoprotein [Brucella sp. NF 2653]
gi|306406522|gb|EFM62756.1| lipoprotein [Brucella sp. NF 2653]
Length = 209
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 56/205 (27%), Positives = 115/205 (56%), Gaps = 7/205 (3%)
Query: 2 DKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIIT 60
D K ++ + + S+AVLL L+ C P++ ++L+ ++++QL+I
Sbjct: 9 DMKSRRMFRHRG---SVAVLLTAFLAGCGT-TTPLDTFNLSTPQPMVTVPKRKNLQLLIP 64
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN G + +P
Sbjct: 65 GPAALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGAFGGIGRPGD 124
Query: 121 GIYADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
G+ +YQ+++ +R F I A++ M++++++ + +VF + +
Sbjct: 125 GLAINYQVLTDLRMFGIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNA 184
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
++++L++AF + +EI+ WT+S+L
Sbjct: 185 AYVKALDKAFDQTVNEIVSWTISTL 209
>gi|218670693|ref|ZP_03520364.1| putative ABC transporter protein [Rhizobium etli GR56]
Length = 203
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 77/196 (39%), Positives = 117/196 (59%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + YDL + D + Q++I P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGTAAK-NDTYDLAGTVDGDGPAAKSRQILIAGPTALRSL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPR++Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDKLPRIVQSKLVEAFENSGKLGGVGLPGQGLAIDYQV 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S+K++N + S+ QKVF DN F+++L+ A
Sbjct: 129 VTDIRSFEIDASSGNQAVVEISVKLLNDRNGSVRAQKVFRAMAPAGGDNV-GFVKALDHA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS + SEI+ WTL S+
Sbjct: 188 FSIVVSEIVSWTLRSI 203
>gi|190892032|ref|YP_001978574.1| putative ABC transporter protein [Rhizobium etli CIAT 652]
gi|190697311|gb|ACE91396.1| putative ABC transporter protein [Rhizobium etli CIAT 652]
Length = 203
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
I+ +I+ L L+ LS C + +DL+ + D + Q+++ P + L
Sbjct: 13 IRGTVIALPLTALI---LSGCGAAAK-NDTFDLSGAVDGDGPAAKSRQILVAGPTALRAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R SP EIQYL +QW DKLPRM+Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 DSEQIVIRVSPSEIQYLSRAQWGDKLPRMVQSKLVEAFENSGKLGGVGLPGQGLAIDYQV 128
Query: 129 ISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
++ IRSFEI+ + A++ +S+KI+N + S+ QKVF DN F++SL+RA
Sbjct: 129 VTDIRSFEIDASSGNQAVVEISVKILNDRNGSVRAQKVFRATAPAGGDN-AGFVKSLDRA 187
Query: 188 FSRISSEIIDWTLSSL 203
FS + SEI+ WTL S+
Sbjct: 188 FSTVVSEIVSWTLRSI 203
>gi|306843896|ref|ZP_07476491.1| lipoprotein [Brucella sp. BO1]
gi|306275651|gb|EFM57375.1| lipoprotein [Brucella sp. BO1]
Length = 209
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 55/205 (26%), Positives = 115/205 (56%), Gaps = 7/205 (3%)
Query: 2 DKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIIT 60
D K ++ + + S+A+LL L+ C P++ ++L+ ++++QL+I
Sbjct: 9 DMKSRRMFRHRG---SVAILLTAFLAGCGT-TTPLDTFNLSTPQPMVTVPKRKNLQLLIP 64
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN G + +P
Sbjct: 65 GPAALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGAFGGIGRPGD 124
Query: 121 GIYADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
G+ +YQ+++ +R F I A++ M++++++ + +VF + +
Sbjct: 125 GLAINYQVLTDLRMFGIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNA 184
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
++++L++AF + +EI+ WT+S+L
Sbjct: 185 AYVKALDKAFDQTVNEIVSWTISTL 209
>gi|254719098|ref|ZP_05180909.1| hypothetical protein Bru83_06095 [Brucella sp. 83/13]
gi|265984089|ref|ZP_06096824.1| lipoprotein [Brucella sp. 83/13]
gi|264662681|gb|EEZ32942.1| lipoprotein [Brucella sp. 83/13]
Length = 200
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 55/203 (27%), Positives = 114/203 (56%), Gaps = 7/203 (3%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIITEP 62
K ++ + + S+AVLL L+ C P++ ++L+ ++++QL+I P
Sbjct: 2 KSRRMFRHRG---SVAVLLTAFLAGCGT-TTPLDTFNLSTPQPMVTVPKRKNLQLLIPGP 57
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN G + +P G+
Sbjct: 58 AALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTGAFGGIGRPGDGL 117
Query: 123 YADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+YQ+++ +R F I A++ M++++++ + +VF + + +
Sbjct: 118 AINYQVLTDLRMFGIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAY 177
Query: 181 IQSLNRAFSRISSEIIDWTLSSL 203
+++L++AF + +EI+ WT+S+L
Sbjct: 178 VKALDKAFDQTVNEIVSWTISTL 200
>gi|189024188|ref|YP_001934956.1| Protein of unknown function DUF330 [Brucella abortus S19]
gi|237815446|ref|ZP_04594444.1| Protein of unknown function DUF330 [Brucella abortus str. 2308 A]
gi|260545306|ref|ZP_05821047.1| lipoprotein [Brucella abortus NCTC 8038]
gi|260564027|ref|ZP_05834513.1| lipoprotein [Brucella melitensis bv. 1 str. 16M]
gi|260566438|ref|ZP_05836908.1| lipoprotein [Brucella suis bv. 4 str. 40]
gi|260754758|ref|ZP_05867106.1| lipoprotein [Brucella abortus bv. 6 str. 870]
gi|260757981|ref|ZP_05870329.1| lipoprotein [Brucella abortus bv. 4 str. 292]
gi|260761804|ref|ZP_05874147.1| lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|260883778|ref|ZP_05895392.1| lipoprotein [Brucella abortus bv. 9 str. C68]
gi|261214010|ref|ZP_05928291.1| lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|261218637|ref|ZP_05932918.1| lipoprotein [Brucella ceti M13/05/1]
gi|261314251|ref|ZP_05953448.1| lipoprotein [Brucella pinnipedialis M163/99/10]
gi|261321865|ref|ZP_05961062.1| lipoprotein [Brucella ceti M644/93/1]
gi|261325115|ref|ZP_05964312.1| lipoprotein [Brucella neotomae 5K33]
gi|261758210|ref|ZP_06001919.1| lipoprotein [Brucella sp. F5/99]
gi|265991105|ref|ZP_06103662.1| lipoprotein [Brucella melitensis bv. 1 str. Rev.1]
gi|265994942|ref|ZP_06107499.1| lipoprotein [Brucella melitensis bv. 3 str. Ether]
gi|265998155|ref|ZP_06110712.1| lipoprotein [Brucella ceti M490/95/1]
gi|265999468|ref|ZP_05466515.2| lipoprotein [Brucella melitensis bv. 2 str. 63/9]
gi|297248346|ref|ZP_06932064.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|189019760|gb|ACD72482.1| Protein of unknown function DUF330 [Brucella abortus S19]
gi|237790283|gb|EEP64493.1| Protein of unknown function DUF330 [Brucella abortus str. 2308 A]
gi|260096713|gb|EEW80588.1| lipoprotein [Brucella abortus NCTC 8038]
gi|260154043|gb|EEW89135.1| lipoprotein [Brucella melitensis bv. 1 str. 16M]
gi|260155956|gb|EEW91036.1| lipoprotein [Brucella suis bv. 4 str. 40]
gi|260668299|gb|EEX55239.1| lipoprotein [Brucella abortus bv. 4 str. 292]
gi|260672236|gb|EEX59057.1| lipoprotein [Brucella abortus bv. 2 str. 86/8/59]
gi|260674866|gb|EEX61687.1| lipoprotein [Brucella abortus bv. 6 str. 870]
gi|260873306|gb|EEX80375.1| lipoprotein [Brucella abortus bv. 9 str. C68]
gi|260915617|gb|EEX82478.1| lipoprotein [Brucella abortus bv. 3 str. Tulya]
gi|260923726|gb|EEX90294.1| lipoprotein [Brucella ceti M13/05/1]
gi|261294555|gb|EEX98051.1| lipoprotein [Brucella ceti M644/93/1]
gi|261301095|gb|EEY04592.1| lipoprotein [Brucella neotomae 5K33]
gi|261303277|gb|EEY06774.1| lipoprotein [Brucella pinnipedialis M163/99/10]
gi|261738194|gb|EEY26190.1| lipoprotein [Brucella sp. F5/99]
gi|262552623|gb|EEZ08613.1| lipoprotein [Brucella ceti M490/95/1]
gi|262766055|gb|EEZ11844.1| lipoprotein [Brucella melitensis bv. 3 str. Ether]
gi|263001889|gb|EEZ14464.1| lipoprotein [Brucella melitensis bv. 1 str. Rev.1]
gi|263094127|gb|EEZ18049.1| lipoprotein [Brucella melitensis bv. 2 str. 63/9]
gi|297175515|gb|EFH34862.1| conserved hypothetical protein [Brucella abortus bv. 5 str. B3196]
gi|326409043|gb|ADZ66108.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326538752|gb|ADZ86967.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 209
Score = 199 bits (505), Expect = 2e-49, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 114/205 (55%), Gaps = 7/205 (3%)
Query: 2 DKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIIT 60
D K ++ + + S+A+LL L+ C P++ ++L+ ++++QL+I
Sbjct: 9 DMKSRRMFRHRG---SVAILLTAFLAGCGT-TTPLDTFNLSTPQPMVTVPKRKNLQLLIP 64
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN + +P
Sbjct: 65 GPAALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGD 124
Query: 121 GIYADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
G+ +YQ+++ +R F I A++ M++++++ + +VF + +
Sbjct: 125 GLAINYQVLTDLRMFGIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNA 184
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
++++L++AF + +EI+ WT+S+L
Sbjct: 185 AYVKALDKAFDQTVNEIVSWTISTL 209
>gi|294852387|ref|ZP_06793060.1| hypothetical protein BAZG_01314 [Brucella sp. NVSL 07-0026]
gi|294820976|gb|EFG37975.1| hypothetical protein BAZG_01314 [Brucella sp. NVSL 07-0026]
Length = 209
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 114/205 (55%), Gaps = 7/205 (3%)
Query: 2 DKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIIT 60
D K ++ + + S+A+LL L+ C P++ ++L+ ++++QL+I
Sbjct: 9 DMKSRRMFRHRG---SVAILLTAFLAGCGT-TTPLDTFNLSTPQPMVTVPKRKNLQLLIP 64
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN + +P
Sbjct: 65 GPAALKALDSENIVVSSAPGSIKYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGD 124
Query: 121 GIYADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
G+ +YQ+++ +R F I A++ M++++++ + +VF + +
Sbjct: 125 GLAINYQVLTDLRMFGIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNA 184
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
++++L++AF + +EI+ WT+S+L
Sbjct: 185 AYVKALDKAFDQTVNEIVSWTISTL 209
>gi|229587672|ref|YP_002869791.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229359538|emb|CAY46379.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 203
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 34/196 (17%), Positives = 86/196 (43%), Gaps = 2/196 (1%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+K+ + L S S +P ++Y LT + + L + +P T + L
Sbjct: 1 MKRAYQMIAPVALALVSACSILPKADPSDVYRLTSAQTTSQGAPVSWSLRVNKPQTSEFL 60
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+S I V + I S+WSD P +++ + + F+ +G+++ + + + +DY++
Sbjct: 61 DSPRIAVVPNGDLISSYANSRWSDPSPVLLRNRFMDGFQRDGRVTLLSTDDTNLQSDYEL 120
Query: 129 ISAIRSFEINIDRH--CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+++F+ +I + +++ D +V + F V + + + +
Sbjct: 121 GGQLQAFQSEYRGSAVEVVIRLDARLVRGSDQRIVASRRFEVRQPVSDTKVPAVVAGFGQ 180
Query: 187 AFSRISSEIIDWTLSS 202
A +++ +++DW +
Sbjct: 181 AGDQLNKQVVDWVVQQ 196
>gi|325293031|ref|YP_004278895.1| ABC transporter [Agrobacterium sp. H13-3]
gi|325060884|gb|ADY64575.1| putative ABC transporter protein [Agrobacterium sp. H13-3]
Length = 201
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 70/205 (34%), Positives = 121/205 (59%), Gaps = 6/205 (2%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ--RHIQLI 58
M + +N ++ ++ L + + + +DL+ S+ + QL+
Sbjct: 1 MTRLMNGHKRRALLLVPLLAVAVAGCAGTPS----NDTFDLSVSSATVTQGPSLKGRQLL 56
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
I +P K L+SE+I+VR S E+QYL SQWSD+LPRM+Q KL+ FE+ GK+ V +P
Sbjct: 57 IADPTALKALDSENIVVRLSGSEVQYLGNSQWSDRLPRMVQSKLVQAFEDTGKLGGVGRP 116
Query: 119 NQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
QG+ DYQ++S IR+FEI+ ++ A I +S+K++N + ++ Q+VF ++
Sbjct: 117 GQGLAIDYQVVSDIRTFEIDTAKNTADIEISVKLLNDRNGTVKAQEVFRASARVSGSGNA 176
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
+F+++L++AF+ + EI+ WTL SL
Sbjct: 177 NFVKALDQAFAAATREIVAWTLKSL 201
>gi|90417912|ref|ZP_01225824.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337584|gb|EAS51235.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 194
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYD-ESVQRHIQLIITEPITEKILN 69
+ + S LL LS+C + P + Y+++ D + QL+I EP + ++
Sbjct: 2 RAALKSSFVALLALGLSAC--ASTPPDTYEISPPPFSDVREGKSRRQLLIPEPTALETID 59
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S+ II++ SP IQ+L SQWSD+LPR++QL+L+ FEN G I + P QG+ DYQ++
Sbjct: 60 SKRIIIKPSPNSIQFLGDSQWSDRLPRLVQLRLLQAFENTGSIGAIGVPGQGLAIDYQLV 119
Query: 130 SAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
IR FE+N+ A + +S+K++N + +++ ++F+ + + F+ +L++AF
Sbjct: 120 MEIRRFEVNVTGAATAEVQISVKVLNDRNGTVLRTRIFNAQAPVNGAGNPAFVAALDKAF 179
Query: 189 SRISSEIIDWTLS 201
++S+EI+DWT+
Sbjct: 180 EQVSAEIVDWTIQ 192
>gi|15888954|ref|NP_354635.1| hypothetical protein Atu1644 [Agrobacterium tumefaciens str. C58]
gi|15156733|gb|AAK87420.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 201
Score = 197 bits (500), Expect = 9e-49, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 119/205 (58%), Gaps = 6/205 (2%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ--RHIQLI 58
M +N ++ + L L + + +DL+ S+ + QL+
Sbjct: 1 MRLSINGQKRRALFLAPLFAALMAGCAG----APNNDTFDLSVSSAAVTQGPSLKSRQLL 56
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
I +P K L+SE+I+VR S E+QYL SQWSD+LPRM+Q KL+ FE+ GK+ V +P
Sbjct: 57 IADPTALKALDSENIVVRLSGSEVQYLGNSQWSDRLPRMVQSKLVEAFEDTGKLGGVGRP 116
Query: 119 NQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
QG+ DYQ++S IR+FEI+ R+ A I +S+K++N + ++ Q+VF ++
Sbjct: 117 GQGLAIDYQVVSDIRAFEIDTARNVANIEISVKLLNDRNGTVKAQEVFRASARVSGSGNA 176
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
+F+++L++AF+ + EI+ WTL SL
Sbjct: 177 NFVKALDQAFAAATREIVAWTLKSL 201
>gi|222086197|ref|YP_002544729.1| ABC transporter protein [Agrobacterium radiobacter K84]
gi|221723645|gb|ACM26801.1| ABC transporter protein [Agrobacterium radiobacter K84]
Length = 218
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 111/191 (58%), Gaps = 3/191 (1%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDII 74
+ + LL LS C + + YDL+ S K + + Q++I P + L+S I+
Sbjct: 29 AAIVLPLLAALLSGCGSKPS-NDTYDLSASVKASGPLMKGKQILIPPPTALQALDSNLIV 87
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+R SP EIQYL +QWSDKL RM+Q KL+ FEN GK+ V P QG+ DYQI++ IRS
Sbjct: 88 IRVSPSEIQYLGKAQWSDKLSRMVQSKLVEAFENTGKLGGVGVPGQGLAIDYQIVTDIRS 147
Query: 135 FEINIDRHC--AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
FEI+ A + +S+KI+N ++ Q VF + + FI+ L+ AF+ ++
Sbjct: 148 FEIDAAGGQKSAAVEISVKILNDRTGTIKSQSVFRKVVPVTGGSNPDFIRGLDTAFAGVT 207
Query: 193 SEIIDWTLSSL 203
+EI+DW+L SL
Sbjct: 208 AEIVDWSLRSL 218
>gi|23501902|ref|NP_698029.1| putative lipoprotein [Brucella suis 1330]
gi|62289945|ref|YP_221738.1| lipoprotein [Brucella abortus bv. 1 str. 9-941]
gi|82699873|ref|YP_414447.1| hypothetical protein BAB1_1041 [Brucella melitensis biovar Abortus
2308]
gi|161618974|ref|YP_001592861.1| hypothetical protein BCAN_A1037 [Brucella canis ATCC 23365]
gi|225627500|ref|ZP_03785537.1| lipoprotein [Brucella ceti str. Cudo]
gi|225852527|ref|YP_002732760.1| hypothetical protein BMEA_A1063 [Brucella melitensis ATCC 23457]
gi|254689252|ref|ZP_05152506.1| hypothetical protein Babob68_03556 [Brucella abortus bv. 6 str.
870]
gi|254693736|ref|ZP_05155564.1| hypothetical protein Babob3T_03559 [Brucella abortus bv. 3 str.
Tulya]
gi|254697387|ref|ZP_05159215.1| hypothetical protein Babob28_06690 [Brucella abortus bv. 2 str.
86/8/59]
gi|254701773|ref|ZP_05163601.1| hypothetical protein Bsuib55_13076 [Brucella suis bv. 5 str. 513]
gi|254704315|ref|ZP_05166143.1| hypothetical protein Bsuib36_10369 [Brucella suis bv. 3 str. 686]
gi|254706783|ref|ZP_05168611.1| hypothetical protein BpinM_07295 [Brucella pinnipedialis
M163/99/10]
gi|254710107|ref|ZP_05171918.1| hypothetical protein BpinB_07496 [Brucella pinnipedialis B2/94]
gi|254714108|ref|ZP_05175919.1| hypothetical protein BcetM6_12275 [Brucella ceti M644/93/1]
gi|254716835|ref|ZP_05178646.1| hypothetical protein BcetM_10519 [Brucella ceti M13/05/1]
gi|254730285|ref|ZP_05188863.1| hypothetical protein Babob42_03599 [Brucella abortus bv. 4 str.
292]
gi|256031603|ref|ZP_05445217.1| hypothetical protein BpinM2_13278 [Brucella pinnipedialis
M292/94/1]
gi|256044681|ref|ZP_05447585.1| hypothetical protein Bmelb1R_09313 [Brucella melitensis bv. 1 str.
Rev.1]
gi|256061114|ref|ZP_05451268.1| hypothetical protein Bneo5_12212 [Brucella neotomae 5K33]
gi|256113575|ref|ZP_05454395.1| hypothetical protein Bmelb3E_12492 [Brucella melitensis bv. 3 str.
Ether]
gi|256159741|ref|ZP_05457488.1| hypothetical protein BcetM4_12248 [Brucella ceti M490/95/1]
gi|256255003|ref|ZP_05460539.1| hypothetical protein BcetB_12050 [Brucella ceti B1/94]
gi|256257502|ref|ZP_05463038.1| hypothetical protein Babob9C_09143 [Brucella abortus bv. 9 str.
C68]
gi|256369446|ref|YP_003106954.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260168732|ref|ZP_05755543.1| hypothetical protein BruF5_10258 [Brucella sp. F5/99]
gi|261222191|ref|ZP_05936472.1| lipoprotein [Brucella ceti B1/94]
gi|261317656|ref|ZP_05956853.1| lipoprotein [Brucella pinnipedialis B2/94]
gi|261752326|ref|ZP_05996035.1| lipoprotein [Brucella suis bv. 5 str. 513]
gi|261754984|ref|ZP_05998693.1| lipoprotein [Brucella suis bv. 3 str. 686]
gi|265988691|ref|ZP_06101248.1| lipoprotein [Brucella pinnipedialis M292/94/1]
gi|23347843|gb|AAN29944.1| lipoprotein, putative [Brucella suis 1330]
gi|62196077|gb|AAX74377.1| lipoprotein, hypothetical [Brucella abortus bv. 1 str. 9-941]
gi|82615974|emb|CAJ10997.1| Protein of unknown function DUF330 [Brucella melitensis biovar
Abortus 2308]
gi|161335785|gb|ABX62090.1| Hypothetical protein BCAN_A1037 [Brucella canis ATCC 23365]
gi|225617505|gb|EEH14550.1| lipoprotein [Brucella ceti str. Cudo]
gi|225640892|gb|ACO00806.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|255999606|gb|ACU48005.1| lipoprotein, putative [Brucella microti CCM 4915]
gi|260920775|gb|EEX87428.1| lipoprotein [Brucella ceti B1/94]
gi|261296879|gb|EEY00376.1| lipoprotein [Brucella pinnipedialis B2/94]
gi|261742079|gb|EEY30005.1| lipoprotein [Brucella suis bv. 5 str. 513]
gi|261744737|gb|EEY32663.1| lipoprotein [Brucella suis bv. 3 str. 686]
gi|264660888|gb|EEZ31149.1| lipoprotein [Brucella pinnipedialis M292/94/1]
Length = 200
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 113/203 (55%), Gaps = 7/203 (3%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIITEP 62
K ++ + + S+A+LL L+ C P++ ++L+ ++++QL+I P
Sbjct: 2 KSRRMFRHRG---SVAILLTAFLAGCGT-TTPLDTFNLSTPQPMVTVPKRKNLQLLIPGP 57
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN + +P G+
Sbjct: 58 AALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGL 117
Query: 123 YADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+YQ+++ +R F I A++ M++++++ + +VF + + +
Sbjct: 118 AINYQVLTDLRMFGIQAYTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAY 177
Query: 181 IQSLNRAFSRISSEIIDWTLSSL 203
+++L++AF + +EI+ WT+S+L
Sbjct: 178 VKALDKAFDQTVNEIVSWTISTL 200
>gi|222148410|ref|YP_002549367.1| hypothetical protein Avi_1896 [Agrobacterium vitis S4]
gi|221735398|gb|ACM36361.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 204
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEP 62
+ + + +C+L++L L+ C +P + YDL + Q+++ +P
Sbjct: 6 AVLRPMAVLRAACALSILG-VMLAGCG--TSPNDTYDLASIRAATTTQSAQKRQVLVADP 62
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
K+L+S+ I+VR S E+QYL SQWSDKLPRM+Q KL+ FEN GK+ V KP QG+
Sbjct: 63 TALKVLDSDMIVVRVSGTEMQYLAKSQWSDKLPRMVQSKLVEAFENTGKLGGVGKPGQGL 122
Query: 123 YADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DYQ++S IR+FE+ A + +S+K++N + S++ QKVF + +
Sbjct: 123 AIDYQLLSDIRTFEVEAGGIRRANVEISVKLLNDRNGSVISQKVFSASVPARGGDNQALV 182
Query: 182 QSLNRAFSRISSEIIDWTLSSL 203
+L++AF+++S +I++WTL+++
Sbjct: 183 NALSQAFAKVSGDIVNWTLTTI 204
>gi|148558849|ref|YP_001258963.1| putative lipoprotein [Brucella ovis ATCC 25840]
gi|148370106|gb|ABQ60085.1| putative lipoprotein [Brucella ovis ATCC 25840]
Length = 200
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 53/203 (26%), Positives = 113/203 (55%), Gaps = 7/203 (3%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIITEP 62
K ++ + + S+A+LL L+ C P++ ++L+ ++++QL+I P
Sbjct: 2 KSRRMFRHRG---SVAILLTAFLAGCGT-TTPLDTFNLSTPQPMVTVPKRKNLQLLIPGP 57
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN + +P G+
Sbjct: 58 AALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGL 117
Query: 123 YADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+YQ+++ +R F I A++ M++++++ + +VF + + +
Sbjct: 118 AINYQVLTDLRMFGIQAYTSPQTAVVEMAVRLLSNKTGEVRATRVFRTAIPVTGTSNAAY 177
Query: 181 IQSLNRAFSRISSEIIDWTLSSL 203
+++L++AF + +EI+ WT+S+L
Sbjct: 178 VKALDKAFDQTVNEIVSWTISTL 200
>gi|312958195|ref|ZP_07772718.1| lipoprotein [Pseudomonas fluorescens WH6]
gi|311287626|gb|EFQ66184.1| lipoprotein [Pseudomonas fluorescens WH6]
Length = 203
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 87/194 (44%), Gaps = 2/194 (1%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+K+ + L S S +P ++Y L + + L +T+P T + L
Sbjct: 1 MKRAYQLIAPVALALISACSILPKADPSDVYRLAATQTATQGAPVSWSLRVTKPQTSEFL 60
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+S I V + I S+WSD P +++ +L+ F+ +G+++ + + ADY++
Sbjct: 61 DSPRIAVVPNGDLISSYANSRWSDPAPVLLRNRLLDGFQRDGRVTLLSTDETNLQADYEL 120
Query: 129 ISAIRSFEINIDRH--CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+++F+ +I + +++ D ++ + F V + + + + +
Sbjct: 121 GGQLQAFQSEYRGSAVEVVIRLDARLVRGSDQRIMASRRFEVRQPVADTKVPAVVAAFGQ 180
Query: 187 AFSRISSEIIDWTL 200
A +++ +++DW +
Sbjct: 181 AGDQLNKQVVDWVV 194
>gi|289662619|ref|ZP_06484200.1| putative secreted protein [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289668436|ref|ZP_06489511.1| putative secreted protein [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 214
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T T Q QL++ +P
Sbjct: 4 MRLLRPMLCVSLLALGGCSVLTGG--DQKPATIYSPTVRVTPNPAWPQVTWQLVVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+I++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V GI +
Sbjct: 62 ARIIDSPRINVRPTPGELQVYQGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 122 DYKLAIDLRRFESDYAGQSLPSATIELNAKLLHSADQRVVASRTFLVARPSTGTDTAAVA 181
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 182 VAFEQALNQVTTELVGWTLTT 202
>gi|163843290|ref|YP_001627694.1| hypothetical protein BSUIS_A1065 [Brucella suis ATCC 23445]
gi|163674013|gb|ABY38124.1| Hypothetical protein BSUIS_A1065 [Brucella suis ATCC 23445]
Length = 200
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 113/203 (55%), Gaps = 7/203 (3%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEP 62
K ++ + + S+A+LL L+ C P++ ++L T ++++QL+I P
Sbjct: 2 KSRRMFRHRG---SVAILLTAFLAGCGT-TTPLDTFNLSTPHPMVTVPKRKNLQLLIPGP 57
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
K L+SE+I+V S+P I+YL G+QW D+L ++Q +L+ +EN + +P G+
Sbjct: 58 AALKALDSENIVVSSAPGSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGL 117
Query: 123 YADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+YQ+++ +R F I A++ M++++++ + +VF + + +
Sbjct: 118 AINYQVLTDLRMFGIQAYTSPQTAVVEMAVRLLSDKTGEVRVTRVFRTAIPVTGTSNAAY 177
Query: 181 IQSLNRAFSRISSEIIDWTLSSL 203
+++L++AF + +EI+ WT+S+L
Sbjct: 178 VKALDKAFDQTVNEIVSWTISTL 200
>gi|294663969|ref|ZP_06729389.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292606264|gb|EFF49495.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 211
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T T Q QL++ +P
Sbjct: 1 MRLLRPLLCVSLLALGGCSVLTGG--DQKPATIYAPTVRVTPNPAWPQVTWQLVVAKPSA 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
++++S I VR SP E+Q G+ W+ M++ ++ FE++GKI+ V GI +
Sbjct: 59 ARVIDSPRINVRPSPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRS 118
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 119 DYKLAIDLRRFESDYAGQSLPSATIELNAKLLHSADQRVVASRTFLVARPSTGTDTAAVA 178
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 179 VAFEQALTQLTTELVGWTLTT 199
>gi|294624130|ref|ZP_06702868.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292601575|gb|EFF45574.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 211
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T T Q QL++ +P
Sbjct: 1 MRLLRPLLCVSLLALGGCSVLTGG--DQKPATIYAPTVRVTPKPAWPQVTWQLVVAKPSA 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
++++S I VR SP E+Q G+ W+ M++ ++ FE++GKI+ V GI +
Sbjct: 59 ARVIDSPRINVRPSPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRS 118
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 119 DYKLAIDLRRFESDYAGQSLPSATIELNAKLLHSADQRVVASRTFLVARPSTGTDTAAVA 178
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 179 VAFEQALTQLTTELVGWTLTT 199
>gi|150396761|ref|YP_001327228.1| hypothetical protein Smed_1551 [Sinorhizobium medicae WSM419]
gi|150028276|gb|ABR60393.1| protein of unknown function DUF330 [Sinorhizobium medicae WSM419]
Length = 204
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 109/195 (55%), Gaps = 2/195 (1%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILN 69
+ + ++ + L L+ C + + L D + + QL++ EP K L
Sbjct: 11 RAGAVRSAVVLTLGMVLAGCGSGKAVNDTFSLASVPTVDRASATNRQLLVPEPTALKTLG 70
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S+ I+VR S E+QYL +QW D LPRM+Q +L+ F+N G+I V KP QG+ DYQ+I
Sbjct: 71 SDQILVRLSSSELQYLAKAQWGDSLPRMVQDRLVQTFDNTGRIR-VGKPGQGLAIDYQLI 129
Query: 130 SAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ +R+FEI+ D A++ + KI++ + ++ Q+ F + F+ +L+ AF
Sbjct: 130 AELRAFEISTDGPARAVVEIFAKILDDRNGTVRKQQAFRAVVPVRGAGNPAFVAALDAAF 189
Query: 189 SRISSEIIDWTLSSL 203
++++++I+ WTL S+
Sbjct: 190 AQVAADIVGWTLRSI 204
>gi|148545414|ref|YP_001265516.1| ABC transporter auxiliary component-like protein [Pseudomonas
putida F1]
gi|148509472|gb|ABQ76332.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Pseudomonas putida F1]
Length = 211
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 80/182 (43%), Gaps = 3/182 (1%)
Query: 24 TSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
S S + PV++Y L + + L + +P+ ++L I V I
Sbjct: 17 VSACSILPKSEPVDLYRLPVNQPSRTAPPLEWSLRLNKPLASEVLAGPRIAVIPQGDVIS 76
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
G++WSD P +++ +L+ F+ +G++ + + + ADY++ +++F+
Sbjct: 77 SYKGARWSDAAPVLLRNRLLDGFQRDGQVQRLSADDSNLQADYELAGELQAFQSEYRPGG 136
Query: 144 A---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
A +I +++N D + K F + + L + +A ++ +++ WT+
Sbjct: 137 AVEVVIRYDARLVNGRDQRIQASKRFEIRQPLADKQVSAVVAGFGQASDQLVGQVVSWTI 196
Query: 201 SS 202
+
Sbjct: 197 AQ 198
>gi|78049254|ref|YP_365429.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|78037684|emb|CAJ25429.1| putative secreted protein [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 214
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 99/201 (49%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T T Q QL++ +P
Sbjct: 4 MRVLRPLLCVSLLALGGCSVLAGG--DKKPATIYAPTVRVTPNPTWPQVTWQLVVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
++++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V GI +
Sbjct: 62 ARVIDSPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 122 DYKLAIDLRRFESDYAGQSLPSATIELNAKLLHSTDQRVVASRTFLVARPSTGTDTAAVA 181
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A ++I++E++ WTL++
Sbjct: 182 VAFEQALTQITTELVGWTLTA 202
>gi|325919795|ref|ZP_08181788.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325920776|ref|ZP_08182681.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325921243|ref|ZP_08183103.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325921531|ref|ZP_08183383.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325921654|ref|ZP_08183489.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325922542|ref|ZP_08184302.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325923181|ref|ZP_08184866.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325923305|ref|ZP_08184978.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325924093|ref|ZP_08185660.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325545425|gb|EGD16712.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325546232|gb|EGD17413.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325546326|gb|EGD17495.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325546981|gb|EGD18075.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325547843|gb|EGD18862.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325547979|gb|EGD18981.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325548210|gb|EGD19204.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325548750|gb|EGD19699.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
gi|325549709|gb|EGD20570.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas gardneri ATCC 19865]
Length = 214
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 48/199 (24%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTES-TKYDESVQRHIQLIITEPIT 64
++++ + L + C+ L+ P IY T T Q QL + +P
Sbjct: 4 MRLLRPLLCVSLLTLGGCSLLTGG--DQKPATIYAPTVRITPNPSWPQVSWQLSVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
++++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V + GI +
Sbjct: 62 ARVIDSPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARIGTGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY+++ +R FE + A I ++ K+++A D +V + F V +
Sbjct: 122 DYKLVIDLRRFESDYAGQSLPSATIELNAKLLHAADQRVVASRTFLVARPSTGTDTATVA 181
Query: 182 QSLNRAFSRISSEIIDWTL 200
+ +A +++++E++ WTL
Sbjct: 182 AAFEQAMTQVTTELVGWTL 200
>gi|260463971|ref|ZP_05812167.1| protein of unknown function DUF330 [Mesorhizobium opportunistum
WSM2075]
gi|259030346|gb|EEW31626.1| protein of unknown function DUF330 [Mesorhizobium opportunistum
WSM2075]
Length = 235
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 99/180 (55%), Gaps = 2/180 (1%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
++ P++ ++L+ + D Q++I +P K L+S++I+++ S IQY
Sbjct: 57 GCAALGGKPAPLDTFELSAPS-VDAHGHSSKQILIAQPSALKALDSQNIVIKPSDRSIQY 115
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC- 143
L G+QW+D+LP ++Q +L F+ +G + V KP +G+ DYQ+I +RSFE+ +D
Sbjct: 116 LKGAQWADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEVRSFEVRVDGGEH 175
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
A + + ++++N + + K F+ + ++ +L+ AF + +I+ WT S +
Sbjct: 176 AEVDLFVRLLNDRNGEVRASKSFNASAPVSGKGNSAYVGALDNAFGDAARQIVRWTDSVI 235
>gi|188578637|ref|YP_001915566.1| lipoprotein, putative [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188523089|gb|ACD61034.1| lipoprotein, putative [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 211
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T + Q QL++ +P
Sbjct: 1 MRLLRPLLCVSLLALGGCSVLTGG--DQKPATIYSPTVRVSPNPAWPQVAWQLVVAKPSA 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+I++S I VR +P E+Q G W+ M++ ++ FE++GKI+ V GI +
Sbjct: 59 ARIIDSPRINVRPTPGELQVYQGVGWAQPATDMLEDNVVRAFEDSGKIAAVAHIGTGIRS 118
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I + K++++ D +V + F V +
Sbjct: 119 DYKLAIDLRRFESDYASQSLPSATIEFNAKLLHSTDQRVVASRTFLVARPSTSTDTAAVA 178
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 179 VAFEQALTQVTTELVGWTLTT 199
>gi|166713442|ref|ZP_02244649.1| hypothetical protein Xoryp_18885 [Xanthomonas oryzae pv. oryzicola
BLS256]
Length = 214
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T + Q QL++ +P
Sbjct: 4 MRLLRPLLCVSLLALGGCSVLTGG--DQKPATIYSPTVRVSPNPAWPQVAWQLVVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+I++S I VR +P E+Q G W+ M++ ++ FE++GKI+ V GI +
Sbjct: 62 ARIIDSPRINVRPTPGELQVYQGVGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D +V + F V
Sbjct: 122 DYKLAIDLRRFESDYAGQPLPSATIELNAKLLHSSDQRVVASRTFLVARPSTSTETAAVA 181
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 182 VAFEQALTQVTTELVGWTLTT 202
>gi|17987245|ref|NP_539879.1| membrane lipoprotein lipid attachment site containing protein
[Brucella melitensis bv. 1 str. 16M]
gi|17982919|gb|AAL52143.1| membrane lipoprotein lipid attachment site containing protein
[Brucella melitensis bv. 1 str. 16M]
Length = 185
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 49/186 (26%), Positives = 104/186 (55%), Gaps = 4/186 (2%)
Query: 21 LLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
+L L+ C P++ ++L+ ++++QL+I P K L+SE+I+V S+P
Sbjct: 1 MLTAFLAGCGT-TTPLDTFNLSTPQPMVTVPKRKNLQLLIPGPAALKALDSENIVVSSAP 59
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEIN- 138
I+YL G+QW D+L ++Q +L+ +EN + +P G+ +YQ+++ +R F I
Sbjct: 60 GSIEYLKGAQWGDRLTNIVQSRLVQAYENTSAFGGIGRPGDGLAINYQVLTDLRMFGIQA 119
Query: 139 -IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
A++ M++++++ + +VF + + ++++L++AF + +EI+
Sbjct: 120 YTSPQTAVVEMAVRLLSDKTGEVRATRVFRTAIPVTGTSNAAYVKALDKAFDQTVNEIVS 179
Query: 198 WTLSSL 203
WT+S+L
Sbjct: 180 WTISTL 185
>gi|104779405|ref|YP_605903.1| lipoprotein [Pseudomonas entomophila L48]
gi|95108392|emb|CAK13086.1| putative lipoprotein [Pseudomonas entomophila L48]
Length = 204
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 35/180 (19%), Positives = 78/180 (43%), Gaps = 3/180 (1%)
Query: 27 SSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLI 86
S PV+IY L + L + +P+ + L I V I
Sbjct: 20 CSILPQGEPVDIYRLPVGQTARGASPLDWSLRLNKPLASEALAGPRIAVIPQGDVISSYK 79
Query: 87 GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH---C 143
G++WSD +P +++ +L+ F+ +G++ + + + ADY++ +++F+
Sbjct: 80 GARWSDPVPMLVRNRLLDGFQRDGRVQRLSADDSNLQADYELGGELQAFQAEYRPGGSVE 139
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+I +++ ++ K F V + L + + A +++ ++IDWT+S +
Sbjct: 140 VVIRYDARLVQGRSQRILASKRFEVRQPLGQLQVPAVVAGFGTASDQLARQVIDWTVSQV 199
>gi|58580426|ref|YP_199442.1| hypothetical protein XOO0803 [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84622388|ref|YP_449760.1| hypothetical protein XOO_0731 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|58425020|gb|AAW74057.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae
KACC10331]
gi|84366328|dbj|BAE67486.1| conserved hypothetical protein [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 214
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 97/201 (48%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T + Q QL++ +P
Sbjct: 4 MRLLRPLLCVSLLALGGCSVLTGG--DQKPATIYSPTVRVSPNPAWPQVAWQLVVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+I++S I VR +P E+Q G W+ M++ ++ FE++GKI+ V GI +
Sbjct: 62 ARIIDSPRINVRPTPGELQVYQGVGWAQPATDMLEDNVVRAFEDSGKIAAVAHIGTGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I + K++++ D +V + F V +
Sbjct: 122 DYKLAIDLRRFESDYASQSLPSATIEFNAKLLHSTDQRVVASRTFLVARPSTSTDTAAVA 181
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 182 VAFEQALTQVTTELVGWTLTT 202
>gi|304391805|ref|ZP_07373747.1| lipoprotein [Ahrensia sp. R2A130]
gi|303296034|gb|EFL90392.1| lipoprotein [Ahrensia sp. R2A130]
Length = 195
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 3/197 (1%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTEST-KYDESVQRHIQLIITEPITEK 66
+I K I + LA + + P Y+ + + + + QL++ P + K
Sbjct: 1 MIFKAITTTLLAAFVLSGCQLLKAPEKPRETYEFSAPSFDGGVAGGTNAQLLVKLPTSLK 60
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
++SE +I+R +P I Y+ G+QWSD +PR++Q KL+ FEN G KP G+ D+
Sbjct: 61 AIDSERMILRPTPKIITYVAGAQWSDSVPRLVQAKLVEAFENTGSAGATAKPGDGLVIDF 120
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
Q+I IR FEI A+I +S+K+++ +V ++F + +++ + +R
Sbjct: 121 QLIPDIRRFEI--IGGEAVIEVSIKLLSDKSGRVVASRIFTTSAATGGNQPENYVAAFDR 178
Query: 187 AFSRISSEIIDWTLSSL 203
AFS + ++I WT +
Sbjct: 179 AFSSFAEDVIAWTFRQV 195
>gi|227822228|ref|YP_002826199.1| putative ABC transporter protein [Sinorhizobium fredii NGR234]
gi|227341228|gb|ACP25446.1| putative ABC transporter protein [Sinorhizobium fredii NGR234]
Length = 205
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 55/194 (28%), Positives = 108/194 (55%), Gaps = 1/194 (0%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
++ + L L+ C + + L + + + Q+++ EP K L S
Sbjct: 12 AGAARFAMVLSLTALLAGCGTRQAANDTFSLASTPVVERPAATNRQILVPEPTALKTLGS 71
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
+ I+VR S E+Q+L +QW D LPR++Q +L+ F+N G++ V KP QG+ DYQ+++
Sbjct: 72 DQIVVRLSKSELQFLAQAQWGDSLPRLVQDRLVQTFDNTGRVRGVGKPGQGLAIDYQLVT 131
Query: 131 AIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+R+FEI+ D A++ + KI++ + ++ Q+ F ++ F+ +L+ AF+
Sbjct: 132 ELRAFEISTDGPDTAVVEIFAKILDDRNGTVRRQQAFRAVAPVQGAGNPAFVAALDAAFA 191
Query: 190 RISSEIIDWTLSSL 203
+++++I+ WTL S+
Sbjct: 192 QVAADIVSWTLRSI 205
>gi|13470956|ref|NP_102525.1| hypothetical protein mll0797 [Mesorhizobium loti MAFF303099]
gi|14021699|dbj|BAB48311.1| mll0797 [Mesorhizobium loti MAFF303099]
Length = 197
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 99/180 (55%), Gaps = 2/180 (1%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
+ P++ ++L+ + D Q++I +P K L+S++I+++ S IQY
Sbjct: 19 GCAVLGGKPAPLDTFELSAPS-VDAHGHSRKQILIAQPSALKALDSQNIVIKPSDRSIQY 77
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC- 143
L G+QW+D+LP ++Q +L F+ +G + V KP +G+ DYQ+I IRSFE+++D
Sbjct: 78 LKGAQWADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEIRSFEVSVDGGEH 137
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
A + + ++++N + + K F + +I++L+ AF + +I+ WT S +
Sbjct: 138 AEVDLFVRLLNDRNGEVRASKSFTASAPVSGSGNPAYIKALDSAFGDAAKQIVRWTDSVI 197
>gi|28198461|ref|NP_778775.1| hypothetical protein PD0551 [Xylella fastidiosa Temecula1]
gi|182681134|ref|YP_001829294.1| putative secreted protein [Xylella fastidiosa M23]
gi|28056545|gb|AAO28424.1| conserved hypothetical protein [Xylella fastidiosa Temecula1]
gi|182631244|gb|ACB92020.1| putative secreted protein [Xylella fastidiosa M23]
gi|307579582|gb|ADN63551.1| putative secreted protein [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 213
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPIT 64
K+I + L + C+S + P IY D S R L + P
Sbjct: 1 MKLIHPLVCLSVLTLASCSS--TLLGEKKPTTIYSPQIHVTTDPSWPRVTWHLTVLHPKA 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+++++ I V+ +P EIQ W+ M++ LI FE++GKI+ V + GI
Sbjct: 59 PRMIDTPRINVQPTPGEIQVYHNVSWAQPTTDMLEDALIRVFEDSGKIAGVTRAGTGIRT 118
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY + +R FE + A I ++ K+I AH+ L+ + F V + +
Sbjct: 119 DYSLSLDLRRFESDYAGTPMPTATIEVNAKLIGAHNKRLIASRTFIVTQPATNTDTSTVA 178
Query: 182 QSLNRAFSRISSEIIDWTLS 201
+ +A +++++E++ WTL+
Sbjct: 179 NAFGQALTQLTNELVGWTLT 198
>gi|71274910|ref|ZP_00651198.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71898798|ref|ZP_00680966.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|170729826|ref|YP_001775259.1| hypothetical protein Xfasm12_0625 [Xylella fastidiosa M12]
gi|71164642|gb|EAO14356.1| conserved hypothetical protein [Xylella fastidiosa Dixon]
gi|71731384|gb|EAO33447.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|167964619|gb|ACA11629.1| conserved hypothetical protein [Xylella fastidiosa M12]
Length = 213
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPIT 64
K+I + L + C+S + P IY D S R L + P
Sbjct: 1 MKLIHPLVCLSVLTLASCSS--TLLGEKKPTTIYSPQIHVTTDPSWPRVTWHLTVLHPKA 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+++++ I V+ +P EIQ W+ M++ LI FE++GKI+ V + GI
Sbjct: 59 PRMIDTPRINVQPTPGEIQVYHNVSWAQPTTDMLEDALIRVFEDSGKIAGVTRAGTGIRT 118
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY + +R FE + A I ++ K+I AH+ L+ + F V + +
Sbjct: 119 DYSLSLDLRRFESDYAGTPMPTATIEVNAKLIGAHNKRLIASRTFIVTQPATNTDTSTVA 178
Query: 182 QSLNRAFSRISSEIIDWTLS 201
+ +A +++++E++ WTL+
Sbjct: 179 NAFGQALTQLTNELVGWTLT 198
>gi|71901852|ref|ZP_00683915.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
gi|71728380|gb|EAO30548.1| conserved hypothetical protein [Xylella fastidiosa Ann-1]
Length = 213
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 92/200 (46%), Gaps = 6/200 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPIT 64
K+I + L + C+S + P IY D S R L I P
Sbjct: 1 MKLIHPLVCLSVLTLASCSS--TLLGEKKPTTIYSPQIHVTTDPSWPRVTWHLTILHPKA 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+++++ I V+ +P EIQ W+ M++ LI FE++GKI+ V + GI
Sbjct: 59 PRMIDTPRINVQPTPGEIQVYHNVSWAQPTTDMLEDALIRVFEDSGKIAGVTRAGTGIRT 118
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY + +R FE + A I ++ K+I+AH+ L+ + F V + +
Sbjct: 119 DYSLSLDLRRFESDYAGTPMPTATIEVNAKLISAHNKRLIASRTFIVTQPATNTDTSTVA 178
Query: 182 QSLNRAFSRISSEIIDWTLS 201
+ +A +++++E++ WTL+
Sbjct: 179 NAFGQALTQLTNELVGWTLT 198
>gi|325928561|ref|ZP_08189749.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas perforans 91-118]
gi|325541100|gb|EGD12654.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas perforans 91-118]
Length = 214
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 100/201 (49%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + + LA+ C+ L+ P IY T T Q QL++ +P
Sbjct: 4 MRVLRPLLCASLLALGGCSVLTGG--DQKPATIYAPTVRVTPNPNWPQVTWQLVVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
++++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V GI +
Sbjct: 62 ARVIDSPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 122 DYKLAIDLRRFESDYAGQSLPSATIELNAKLLHSTDQRVVASRTFLVARLSTGTDTAAVA 181
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 182 VAFEQALTQVTTELVGWTLTA 202
>gi|167031176|ref|YP_001666407.1| lipoprotein [Pseudomonas putida GB-1]
gi|166857664|gb|ABY96071.1| lipoprotein [Pseudomonas putida GB-1]
Length = 211
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 79/179 (44%), Gaps = 3/179 (1%)
Query: 27 SSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLI 86
S + PV++Y L + + L + +P+ ++L I V +
Sbjct: 20 CSILPKSEPVDLYRLPVNQPSRTAPALDWSLRLNKPLASEVLAGPRIAVIPQGDMVSSYK 79
Query: 87 GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA-- 144
G++WSD P +++ +L+ F+ +G++ + + + ADY++ +++F+ A
Sbjct: 80 GARWSDAAPVLLRNRLLDGFQRDGQVQRLSADDSNLQADYELAGELQAFQSEYRPGGAVE 139
Query: 145 -IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+I +++ + ++ K F + + L + +A ++ +++ WT++
Sbjct: 140 VVIRYDARLVQGRNQRILASKRFEIRQPLTDKQVSAVVIGFGQASDQLVGQVVSWTIAQ 198
>gi|114707112|ref|ZP_01440010.1| hypothetical protein FP2506_04376 [Fulvimarina pelagi HTCC2506]
gi|114537308|gb|EAU40434.1| hypothetical protein FP2506_04376 [Fulvimarina pelagi HTCC2506]
Length = 193
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 110/191 (57%), Gaps = 2/191 (1%)
Query: 13 IISCSLAVLLCTSLSSCFFHNNPVNIYDLTEST-KYDESVQRHIQLIITEPITEKILNSE 71
++ S ++L +L P+ ++++ QL+I EP K ++SE
Sbjct: 1 MMRVSRLIVLAATLLGIGACTPPLETFEISAPPLGRPAPGATRAQLLIPEPTAIKTIDSE 60
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
I+V+ +P ++YL SQWSD+LPRM+QL+L+ FEN G++ V P QG+ DYQII
Sbjct: 61 RIVVKPTPYSVEYLADSQWSDRLPRMVQLRLLQAFENTGQVGAVGVPGQGLAIDYQIILE 120
Query: 132 IRSFEIN-IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
IR FE++ ++ A+I +S+K ++ + ++ ++F + F+ +++RAF +
Sbjct: 121 IRRFEVDVVNERQAVIEISVKALDDRNGTVRRTQIFTGRAPVAGSGNSAFVAAIDRAFDQ 180
Query: 191 ISSEIIDWTLS 201
+SSEI+ WTL+
Sbjct: 181 VSSEIVAWTLA 191
>gi|319783792|ref|YP_004143268.1| hypothetical protein Mesci_4105 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317169680|gb|ADV13218.1| protein of unknown function DUF330 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 235
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 97/175 (55%), Gaps = 2/175 (1%)
Query: 30 FFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQ 89
P++ ++L+ + D Q++I +P K L+S++I+++ S IQYL G+Q
Sbjct: 62 GGKPAPLDTFELSAPS-VDAHGHSRRQILIAQPSALKALDSQNIVIKPSDRSIQYLKGAQ 120
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC-AIITM 148
W+D+LP ++Q +L F+ +G + V KP +G+ DYQ+I IRSFE+ +D A + +
Sbjct: 121 WADRLPLIVQARLAETFQRSGSFAGVGKPGEGLAIDYQVIVEIRSFEVRVDGGEHAEVDL 180
Query: 149 SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
++I+N + + K F + ++ +L++AF + +I+ WT S +
Sbjct: 181 FVRILNDRNGEVRASKSFTAAAPVSGSGNPAYVSALDKAFGDAAGQIVRWTDSVI 235
>gi|15837901|ref|NP_298589.1| hypothetical protein XF1300 [Xylella fastidiosa 9a5c]
gi|9106291|gb|AAF84109.1|AE003963_6 conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 213
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 6/200 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPIT 64
K+I + L + C+S + P IY D S R L + P
Sbjct: 1 MKLIHPLVCLSVLTLASCSS--TLLGEKKPTTIYSPQIHVTTDPSWPRVTWHLTVLHPKA 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+++++ I V+ +P EIQ W+ M++ LI FE++GKI+ V + GI
Sbjct: 59 PRMIDTPRINVQPTPGEIQVYRNVSWAQPTTDMLEDALIRVFEDSGKIAGVTRAGTGIRT 118
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY + +R FE + A I ++ K+I AH+ L+ + F V + +
Sbjct: 119 DYSLSLDLRRFESDYAGTPMPTATIEVNAKLIGAHNKRLIASRTFIVTQPATNTDTSTVA 178
Query: 182 QSLNRAFSRISSEIIDWTLS 201
+ +A +++++E++ WTL+
Sbjct: 179 NAFGQALTQLTNELVGWTLT 198
>gi|21230107|ref|NP_636024.1| hypothetical protein XCC0632 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769902|ref|YP_244664.1| hypothetical protein XC_3602 [Xanthomonas campestris pv. campestris
str. 8004]
gi|21111635|gb|AAM39948.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66575234|gb|AAY50644.1| conserved hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 214
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T T Q QL++ +P
Sbjct: 4 MRLLRPLLCVSLLALGGCSVLTGG--DQKPATIYAPTVRVTPNPAWPQVSWQLLVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+I++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V + GI +
Sbjct: 62 ARIIDSPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARIGAGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 122 DYKLAIDVRRFESDYAGQSLPAATIELNAKLLHSSDQRVVASRTFTVARPSSSTDTAAVA 181
Query: 182 QSLNRAFSRISSEIIDWTL 200
+ +A +++++E++ WTL
Sbjct: 182 AAFEQALTQVTTELVGWTL 200
>gi|152984731|ref|YP_001347293.1| putative lipoprotein [Pseudomonas aeruginosa PA7]
gi|150959889|gb|ABR81914.1| lipoprotein, putative [Pseudomonas aeruginosa PA7]
Length = 214
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE--STKYDESVQRHIQLIITEPIT 64
+ +++ ++ L V S + +Y L + L I P T
Sbjct: 6 RPLRRLSLAAGLVVFATLGACSILPEAQVLQVYLLPVHNPPASAVARPVDWSLRIARPRT 65
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+L S I VR EI G++WSD P +++ +L+ F+ +G++ + + + A
Sbjct: 66 SLVLESPRIAVRPQGDEISVYQGARWSDPAPALLRDRLMQAFQADGRVRGLSSDDSNLQA 125
Query: 125 DYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
D+++ +R+F+ + A+I +++ + D ++ + F V + ++ +
Sbjct: 126 DFELGGDLRAFQTEYPNGQATALIRYDARLVRSDDKRVIASRRFEVRQPVDGRKVPEVVS 185
Query: 183 SLNRAFSRISSEIIDWTLSSLPL 205
+ +A +S++++DWTL
Sbjct: 186 AFGKAADTLSAQVLDWTLRQAAA 208
>gi|15965583|ref|NP_385936.1| hypothetical protein SMc00177 [Sinorhizobium meliloti 1021]
gi|307302703|ref|ZP_07582459.1| protein of unknown function DUF330 [Sinorhizobium meliloti BL225C]
gi|307318551|ref|ZP_07597985.1| protein of unknown function DUF330 [Sinorhizobium meliloti AK83]
gi|15074764|emb|CAC46409.1| Hypothetical protein SMc00177 [Sinorhizobium meliloti 1021]
gi|306895891|gb|EFN26643.1| protein of unknown function DUF330 [Sinorhizobium meliloti AK83]
gi|306903067|gb|EFN33658.1| protein of unknown function DUF330 [Sinorhizobium meliloti BL225C]
Length = 204
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 62/194 (31%), Positives = 107/194 (55%), Gaps = 2/194 (1%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
++ + L L+ C + + L + + QL++ EP K L S
Sbjct: 12 AAASRSAVVLALAAILAGCGSRQAANDTFSLASVPAVERPGATNRQLLVPEPTALKTLGS 71
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
+ I+VR S E+QYL +QW D LPRM+Q +L+ F+N G+I V KP QG+ DYQ+I+
Sbjct: 72 DQIVVRLSRSELQYLARAQWGDSLPRMVQDRLVQTFDNTGRIR-VGKPGQGLAIDYQLIT 130
Query: 131 AIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+R+FEI+ D A++ + KI++ + ++ Q+ F + F+ +L+ AF+
Sbjct: 131 ELRAFEISTDGAATAVVEIFAKILDDRNGTVRKQQAFRAVVPVRGAGNPAFVAALDAAFA 190
Query: 190 RISSEIIDWTLSSL 203
R++++I+ WTLSS+
Sbjct: 191 RVAADIVGWTLSSI 204
>gi|238789960|ref|ZP_04633739.1| hypothetical protein yfred0001_37270 [Yersinia frederiksenii ATCC
33641]
gi|238721908|gb|EEQ13569.1| hypothetical protein yfred0001_37270 [Yersinia frederiksenii ATCC
33641]
Length = 205
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 93/197 (47%), Gaps = 5/197 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKILN 69
++++ S+ V+L ++ + +Y L +T + + L +++P T + +N
Sbjct: 9 RLLTASMLVMLLSA-CTILPTAPVAQVYLLPVPPATNTPRTQTVNWSLRVSQPATNQFIN 67
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I V+ EI S+W+D P +++ +LI F +G+IS V + + AD ++
Sbjct: 68 SSRIAVQPEGQEIAVYKNSRWTDPAPILLRNRLIHEFRTDGRISAVSSDDDSLQADVELS 127
Query: 130 SAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ +F+ +I +++ D ++ + F + + ++ + + A
Sbjct: 128 GDLSAFQGVYQAGNSEVLIRFDARLVRISDRRIIATRHFEIRQPIKGSQMNEVVDAFGLA 187
Query: 188 FSRISSEIIDWTLSSLP 204
+++++++++WTL P
Sbjct: 188 SNQLATQVLNWTLQQSP 204
>gi|325273985|ref|ZP_08140144.1| ABC transporter auxiliary component-like protein [Pseudomonas sp.
TJI-51]
gi|324100874|gb|EGB98561.1| ABC transporter auxiliary component-like protein [Pseudomonas sp.
TJI-51]
Length = 205
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 83/202 (41%), Gaps = 3/202 (1%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
+ + + TS S + PV++Y L + + L + +P+ ++
Sbjct: 1 MKSSLRLVALAVTIGLTSACSILPTSEPVDLYRLPVNQVSRSAPPLDWSLRLNKPLASEV 60
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
L I V + G++WSD P +++ +L+ F+ +G++ + + + ADY+
Sbjct: 61 LAGPRIAVIPQGNVVSSYKGARWSDPAPMLLRNRLLDGFQRDGQVQRLSADDSNLQADYE 120
Query: 128 IISAIRSFEINI---DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
+ +++F+ +I +++ ++ K F V + L +
Sbjct: 121 LAGELQAFQSEYRADGTVEVVIRYDARLVQGRTQRILASKRFEVRQPLADKQVAGVVAGF 180
Query: 185 NRAFSRISSEIIDWTLSSLPLS 206
+A ++ +++DW ++ S
Sbjct: 181 GQACDLLTGQVVDWAIAQAGSS 202
>gi|325915747|ref|ZP_08178049.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas vesicatoria ATCC 35937]
gi|325538011|gb|EGD09705.1| ABC-type uncharacterized transport system, auxiliary component
[Xanthomonas vesicatoria ATCC 35937]
Length = 214
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 98/201 (48%), Gaps = 6/201 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T T Q QL + +P
Sbjct: 4 MRLLRPLLCVSLLALGGCSVLTGG--DKKPATIYAPTVRVTPNPTWPQVTWQLAVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+I++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V + GI +
Sbjct: 62 ARIIDSPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARIGAGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D + + F V +
Sbjct: 122 DYKLAIDVRRFEADYAGQSVPSATIELNAKLLHSSDQRVAASRTFLVARPSTSTDIAAVA 181
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ +A +++++E++ WTL++
Sbjct: 182 AAFEQALTQVTTELVGWTLTT 202
>gi|313496510|gb|ADR57876.1| Putative lipoprotein [Pseudomonas putida BIRD-1]
Length = 211
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 79/177 (44%), Gaps = 3/177 (1%)
Query: 29 CFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGS 88
+ PV++Y L + + L + +P+ ++L I V + G+
Sbjct: 22 ILPQSEPVDLYRLPVNQPSRTAPPLDWSLRLNKPLASEVLAGPRIAVVPQGNVVSSYKGA 81
Query: 89 QWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA---I 145
+WSD P +++ +L+ F+ G++ + + + ADY++ +++F+ A +
Sbjct: 82 RWSDAAPVLLRNRLLDGFQREGQVQRLSADDSNLQADYELAGELQAFQSEYRTDGAVEVV 141
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
I +++ + ++ K F + + L+ + +A ++ ++++WT++
Sbjct: 142 IRYDARLVQGRNQRILASKRFEIRQPLDDKQVSAVVAGFGQASDQLVGQVVNWTITQ 198
>gi|158423840|ref|YP_001525132.1| ABC-type uncharacterized transport system protein [Azorhizobium
caulinodans ORS 571]
gi|158330729|dbj|BAF88214.1| ABC-type uncharacterized transport system protein [Azorhizobium
caulinodans ORS 571]
Length = 208
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 51/190 (26%), Positives = 97/190 (51%), Gaps = 4/190 (2%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDII 74
L V L +L+ C + P+ YDL+ T + + QL++ P +L+SE I+
Sbjct: 19 RAVLGVFLTLALAGC--ASAPIPTYDLSAPTGFAARGGGNGQLVVVTPTALAVLDSEKIV 76
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
V +P ++ YL +QWSD+L ++Q + I FEN+ + V +P G+ DYQ+ +RS
Sbjct: 77 VEPTPGQVTYLPEAQWSDRLTSLLQARTIQAFENSSRQRRVARPGDGVTGDYQLNMDVRS 136
Query: 135 FEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F I + + A++ +S K+I +V ++F + + +L++A +++
Sbjct: 137 FGIKVLPEGTFAVVEISAKLIATQTGRIVSARIFSARVPVASVSGTSATTALDQASNQVL 196
Query: 193 SEIIDWTLSS 202
E++ W +
Sbjct: 197 MELVRWANGA 206
>gi|123441587|ref|YP_001005573.1| hypothetical protein YE1250 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088548|emb|CAL11342.1| putative exported protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 211
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 37/206 (17%), Positives = 89/206 (43%), Gaps = 4/206 (1%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIIT 60
K ++ ++ + + + + +Y L + + L ++
Sbjct: 5 KIMHSSSRRMGLLMLSVLTMLLPACTILPTAPVSQVYLLPVPPAANAPRAQTVNWSLRVS 64
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+P T + +NS I V+ EI S+W+D P +++ +LI F NG+I V +
Sbjct: 65 QPATNQFINSSRIAVQPEGQEIAVYKNSRWTDPAPILVRNRLIQEFRANGRIPAVSSDDD 124
Query: 121 GIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ AD ++ + +F+ + D +I +++ D ++ + F V + ++
Sbjct: 125 SLQADVELSGDLSAFQGVYHADSSEVLIRFDARLVRISDRRIMATRHFEVRQPIKGAQMN 184
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + A ++++S++++WTL P
Sbjct: 185 EVVDAFGLASNQLASQVLNWTLQQSP 210
>gi|188993117|ref|YP_001905127.1| Putative secreted protein [Xanthomonas campestris pv. campestris
str. B100]
gi|167734877|emb|CAP53089.1| Putative secreted protein [Xanthomonas campestris pv. campestris]
Length = 214
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 49/199 (24%), Positives = 97/199 (48%), Gaps = 6/199 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPIT 64
++++ + LA+ C+ L+ P IY T T Q QL + +P
Sbjct: 4 MRLLRPLLCVSLLALGGCSVLTGG--DQKPATIYAPTVRVTPNPAWPQVSWQLSVAKPSA 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+I++S I VR +P E+Q G+ W+ M++ ++ FE++GKI+ V + GI +
Sbjct: 62 ARIIDSPRINVRPTPGELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVARIGAGIRS 121
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY++ +R FE + A I ++ K++++ D +V + F V +
Sbjct: 122 DYKLAIDVRRFESDYAGQSLPAATIELNAKLLHSSDQRVVASRTFTVARPSSSTDTAAVA 181
Query: 182 QSLNRAFSRISSEIIDWTL 200
+ +A +++++E++ WTL
Sbjct: 182 AAFEQAMTQVTTELVGWTL 200
>gi|146305410|ref|YP_001185875.1| hypothetical protein Pmen_0370 [Pseudomonas mendocina ymp]
gi|145573611|gb|ABP83143.1| protein of unknown function DUF330 [Pseudomonas mendocina ymp]
Length = 199
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 42/180 (23%), Positives = 93/180 (51%), Gaps = 2/180 (1%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
S + P++IY L + +S + L I P + ++L+ I+V P +
Sbjct: 14 GACSILPQSEPLDIYLLPAAQLPAQSQRVDWALRINSPSSSQLLDGTRIVVLPEPDRVNT 73
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF--EINIDRH 142
G +WS++ P++++ +L+ F+++G+I + Q + AD +++S +RSF E
Sbjct: 74 YQGVRWSERTPQLLRNRLLDAFQDDGRIQALSNEEQRLQADLELVSDLRSFHSEYRDGIP 133
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
A+I + + +++A D ++ + F + ++ + I + +A ++S E++DWTL+
Sbjct: 134 YALIRLEVNLVDARDQRILASRRFSISQQASDTSVPAVIAAFGQAGDQLSRELVDWTLNQ 193
>gi|26986884|ref|NP_742309.1| putative lipoprotein [Pseudomonas putida KT2440]
gi|24981487|gb|AAN65773.1|AE016203_6 lipoprotein, putative [Pseudomonas putida KT2440]
Length = 211
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 78/177 (44%), Gaps = 3/177 (1%)
Query: 29 CFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGS 88
+ PV+ Y L + + L + +P+ ++L I V + G+
Sbjct: 22 ILPQSEPVDHYRLPVNQPSRTAPPLDWSLRLNKPLASEVLAGPRIAVVPQGNVVSSYKGA 81
Query: 89 QWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA---I 145
+WSD P +++ +L+ F+ G++ + + + ADY++ +++F+ A +
Sbjct: 82 RWSDAAPVLLRNRLLDGFQREGQVQRLSADDSNLQADYELAGELQAFQSEYRTDGAVEVV 141
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
I +++ + ++ K F + + L+ + +A ++ ++++WT++
Sbjct: 142 IRYDARLVQGRNQRILASKRFEIRQPLDDKQVSAVVAGFGQASDQLVGQVVNWTITQ 198
>gi|238791987|ref|ZP_04635623.1| hypothetical protein yinte0001_8870 [Yersinia intermedia ATCC
29909]
gi|238728618|gb|EEQ20136.1| hypothetical protein yinte0001_8870 [Yersinia intermedia ATCC
29909]
Length = 207
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 87/200 (43%), Gaps = 4/200 (2%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ--RHIQLIITEPITEKI 67
++ + + S + +Y L + L +++P T +
Sbjct: 6 RRVWLLMISGGAILLSACTILPSAPVSQVYLLPVPPAVSAPHAQTVNWSLRVSQPATNQF 65
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
LNS I V+ EI S+WSD P +++ +LI F ++G+I V + + AD +
Sbjct: 66 LNSSRIAVQPQGQEIAVYKNSRWSDSAPILVRNRLIQAFRSDGRIRAVSSDDDSLQADVE 125
Query: 128 IISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ + +F+ ++ +I +++ D ++ + F + + ++ + +Q+
Sbjct: 126 LSGDLSAFQGVYHVGSSEVLIRFDARLVRISDRRIIATRQFEIRQPIKGNEMNEVVQAFG 185
Query: 186 RAFSRISSEIIDWTLSSLPL 205
A ++++++++WT+ P
Sbjct: 186 LASDQLATQVLNWTMQQSPA 205
>gi|170724245|ref|YP_001751933.1| hypothetical protein PputW619_5088 [Pseudomonas putida W619]
gi|169762248|gb|ACA75564.1| protein of unknown function DUF330 [Pseudomonas putida W619]
Length = 207
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 31/179 (17%), Positives = 80/179 (44%), Gaps = 3/179 (1%)
Query: 27 SSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLI 86
S + PV+IY L + + L + +P+ ++L I V +
Sbjct: 20 CSILPQSEPVDIYRLPVNQASHSATPVPWSLRLNKPLASEVLAGPRIAVIPKGDVVSSYK 79
Query: 87 GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH---C 143
G++WSD +P +++ +L+ F+ +G++ + + + ADY++ +++F+
Sbjct: 80 GARWSDPVPLLLRNRLLDGFQRDGRVQRLSADDSNLQADYELAGELQAFQSEYRPTGTVE 139
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+I +++ ++ K F V + L + A ++++++++WT++
Sbjct: 140 VVIRYDARLVQGRSQRILASKRFEVRQPLVDTQVSAVVAGFGVANDQLAAQVVNWTVAQ 198
>gi|298292074|ref|YP_003694013.1| hypothetical protein Snov_2098 [Starkeya novella DSM 506]
gi|296928585|gb|ADH89394.1| protein of unknown function DUF330 [Starkeya novella DSM 506]
Length = 223
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 52/193 (26%), Positives = 97/193 (50%), Gaps = 6/193 (3%)
Query: 16 CSLAVLLCTSLSSCFF----HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
C+ + + +L C + V +DLT + ++ + L++ P +L++E
Sbjct: 30 CAGTLAVALTLGGCGAILAGGDKSVPTFDLTAPSDFNAPRRGTGLLVVGPPTALAVLDTE 89
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
I+V +P +I YL G+QWSD+LP + Q +LI +FEN + +V + G+ ADY +++
Sbjct: 90 RIVVEPAPGQITYLSGAQWSDRLPALFQARLIESFENGNRARSVGRAGDGLTADYTLLTD 149
Query: 132 IRSF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+RSF + + A++ +S KI+ A + +VF + Q+L+ A
Sbjct: 150 LRSFGLQTSDGGPVAVVEVSAKIVGATSGRIAAAQVFKASAPAASTSGPQATQALDAASD 209
Query: 190 RISSEIIDWTLSS 202
++ EI+ W S
Sbjct: 210 QVFIEIVRWASSR 222
>gi|300917990|ref|ZP_07134616.1| lipofamily protein [Escherichia coli MS 115-1]
gi|300414816|gb|EFJ98126.1| lipofamily protein [Escherichia coli MS 115-1]
Length = 213
Score = 184 bits (467), Expect = 6e-45, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 89/200 (44%), Gaps = 4/200 (2%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKI 67
++ + + S + +Y L + + + L +++P T +
Sbjct: 12 RRVWLLMISGGAILLSACTILPSAPVSQVYLLPVPPAVSVPHAQTVNWSLRVSQPATNQF 71
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
LNS I V+ EI S+WSD P +++ +LI F ++G+I V + + AD +
Sbjct: 72 LNSSRIAVQPQGQEIAVYKNSRWSDSAPILVRNRLIQAFRSDGRIRAVSSDDDSLQADVE 131
Query: 128 IISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ + +F+ ++ +I +++ D ++ + F + + ++ + +Q+
Sbjct: 132 LSGDLSAFQGVYHVGSSEVLIRFDARLVRISDRRIIATRQFDIRQPIKGNEMNEVVQAFG 191
Query: 186 RAFSRISSEIIDWTLSSLPL 205
A ++++++++WT+ P
Sbjct: 192 LASDQLATQVLNWTMQQSPA 211
>gi|332162487|ref|YP_004299064.1| hypothetical protein YE105_C2865 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|318606567|emb|CBY28065.1| membrane lipoprotein lipid attachment site containing protein
USSDB6D [Yersinia enterocolitica subsp. palearctica Y11]
gi|325666717|gb|ADZ43361.1| hypothetical protein YE105_C2865 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861185|emb|CBX71442.1| hypothetical protein YEW_CA08670 [Yersinia enterocolitica W22703]
Length = 211
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 86/206 (41%), Gaps = 4/206 (1%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIIT 60
K ++ + + + + S + +Y L + + L ++
Sbjct: 5 KIMHSTGRGTRLLMLSGLAMLLSACTILPSAPVSQVYLLPVPPAANAPRAQAVNWSLRVS 64
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+P T + +NS I V+ EI S+W+D P +++ +LI F +G+I V +
Sbjct: 65 QPATNQFINSSRIAVQPEGQEIAVYKNSRWTDPAPILVRNRLIQEFRTDGRIPAVSSDDD 124
Query: 121 GIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ AD ++ + +F+ +I +++ D ++ + F V + ++
Sbjct: 125 SLQADVELSGDLSAFQGVYQAGNSEVLIRFDARLVRISDRRIMATRHFEVRQPIKGAQMN 184
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + A ++++S++++W L P
Sbjct: 185 EVVDAFGLASNQLASQVLNWALQQSP 210
>gi|110633896|ref|YP_674104.1| ABC-type uncharacterized transport system auxiliary component-like
[Mesorhizobium sp. BNC1]
gi|110284880|gb|ABG62939.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Chelativorans sp. BNC1]
Length = 228
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 107/192 (55%), Gaps = 3/192 (1%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTEST-KYDESVQRHIQLIITEPITEKILN 69
++ SL + C ++ PV++YDLT + + + Q+++ EP KIL+
Sbjct: 37 SGLVILSLMLGGCAAIPGFGPA--PVDVYDLTAPALQLAAARRARTQVLVPEPEALKILD 94
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
EDI +R+S +Q L G++WSD+LPR++Q L+ ++ +G + V +P +G+ DYQ+I
Sbjct: 95 GEDIAIRTSTGALQLLGGARWSDRLPRLVQSGLVEAYQKSGSFAGVGRPGEGLAIDYQVI 154
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
IR+FE+ + A + + +++++ + + F + + F+ +LN+AF+
Sbjct: 155 VDIRTFEVQVGNGLAQVQLFVRVLDDRTGQVRASRDFTTSAPVVGSGDVAFVAALNQAFN 214
Query: 190 RISSEIIDWTLS 201
+ EI+DW+ S
Sbjct: 215 AATREIVDWSRS 226
>gi|313108531|ref|ZP_07794532.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa 39016]
gi|310881034|gb|EFQ39628.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa 39016]
Length = 210
Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 39/190 (20%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTE--STKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
L S + +Y L + L I P T +L S I VR
Sbjct: 15 ALATLGACSILPEAQVLQVYLLPVHNPPASAAARPVDWSLRIARPRTSLVLESPRIAVRP 74
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
EI G++WSD P +++ +L+ F+ +G++ + + + AD+++ +R+F+
Sbjct: 75 HGDEISVYQGARWSDPAPSLLRDRLMQAFQADGRVRGLSSDDSNLQADFELGGDLRAFQT 134
Query: 138 NI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ A+I +++ D +V + F V + ++ + + +A +S+++
Sbjct: 135 EYPNGQASALIRYDARLVRTDDKRVVASRRFEVSQPVDGKKVAAVVSAFGKAGDTLSAQV 194
Query: 196 IDWTLSSLPL 205
+DWTL
Sbjct: 195 LDWTLRQASA 204
>gi|21244298|ref|NP_643880.1| hypothetical protein XAC3573 [Xanthomonas axonopodis pv. citri str.
306]
gi|21109948|gb|AAM38416.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 211
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 46/185 (24%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTES-TKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPI 80
C+ L+ P IY T T Q QL++ +P ++++S I VR +P
Sbjct: 17 GCSVLTGG--DQKPATIYAPTVRMTPNPAWPQVTWQLVVAKPSAARVIDSPRINVRPTPG 74
Query: 81 EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINID 140
E+Q G+ W+ M++ ++ FE++GKI+ V GI +DY++ +R FE +
Sbjct: 75 ELQVYHGAGWAQPATDMLEDSVVRAFEDSGKIAAVAHIGTGIRSDYKLAIDLRRFESDYA 134
Query: 141 R---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
A I ++ K++++ D +V + F V + + +A +++++E++
Sbjct: 135 GQSLPSATIELNAKLLHSADQRVVASRTFLVARPSTGTDTAAVAMAFEQALTQLTTELVG 194
Query: 198 WTLSS 202
WTL++
Sbjct: 195 WTLTT 199
>gi|330501343|ref|YP_004378212.1| hypothetical protein MDS_0429 [Pseudomonas mendocina NK-01]
gi|328915629|gb|AEB56460.1| hypothetical protein MDS_0429 [Pseudomonas mendocina NK-01]
Length = 199
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 93/177 (52%), Gaps = 2/177 (1%)
Query: 27 SSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLI 86
S + P++IY L +T ++ + L + P++ ++L+ I+V P +
Sbjct: 16 CSILPQSEPLDIYLLPATTLPAQTQRVDWSLRVNSPVSNQLLDGTRIVVLPEPGRVNTYQ 75
Query: 87 GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF--EINIDRHCA 144
G +WS++ P++++ +L+ F+++G+I + +Q + AD +++S +RSF E A
Sbjct: 76 GVRWSERTPQLLRARLLDAFQDDGRIQALSNEDQRLQADLELVSDLRSFHSEYRDGIPSA 135
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+I + + +++ ++ + F V + + + + +A ++S E++DWTL+
Sbjct: 136 LIRLEVNLVDTRSQKIIASRRFSVSQAAGDTSITAVVTAFGKAADQLSRELVDWTLA 192
>gi|49079164|gb|AAT49861.1| PA3214 [synthetic construct]
Length = 215
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Query: 27 SSCFFHNNPVNIYDLTE--STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
S + +Y L + L I P T +L S I VR EI
Sbjct: 26 CSILPEAQVLQVYLLPVHNPPASAAARPVDWSLRIARPRTSLVLESPRIAVRPHGDEISV 85
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--DRH 142
G++WSD P +++ +L+ F+ +G++ + + + AD+++ +R+F+ +
Sbjct: 86 YQGARWSDPAPSLLRDRLMQAFQADGRVRGLSSDDSNLQADFELGGDLRAFQTEYPNGQA 145
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
A+I +++ D +V + F V + ++ + + +A +S++++DWTL
Sbjct: 146 SALIRYDARLVRTDDKRVVASRRFEVSQPVDGKKVAAVVSAFGKAGDTLSAQVLDWTLRQ 205
Query: 203 LPL 205
Sbjct: 206 ASA 208
>gi|15598410|ref|NP_251904.1| hypothetical protein PA3214 [Pseudomonas aeruginosa PAO1]
gi|107102744|ref|ZP_01366662.1| hypothetical protein PaerPA_01003811 [Pseudomonas aeruginosa PACS2]
gi|116051204|ref|YP_789965.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218890593|ref|YP_002439457.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa LESB58]
gi|254236176|ref|ZP_04929499.1| hypothetical protein PACG_02141 [Pseudomonas aeruginosa C3719]
gi|254241902|ref|ZP_04935224.1| hypothetical protein PA2G_02623 [Pseudomonas aeruginosa 2192]
gi|296388299|ref|ZP_06877774.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa PAb1]
gi|9949334|gb|AAG06602.1|AE004744_17 hypothetical protein PA3214 [Pseudomonas aeruginosa PAO1]
gi|115586425|gb|ABJ12440.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126168107|gb|EAZ53618.1| hypothetical protein PACG_02141 [Pseudomonas aeruginosa C3719]
gi|126195280|gb|EAZ59343.1| hypothetical protein PA2G_02623 [Pseudomonas aeruginosa 2192]
gi|218770816|emb|CAW26581.1| putative ABC-type uncharacterized transport system [Pseudomonas
aeruginosa LESB58]
Length = 214
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 80/183 (43%), Gaps = 4/183 (2%)
Query: 27 SSCFFHNNPVNIYDLTE--STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
S + +Y L + L I P T +L S I VR EI
Sbjct: 26 CSILPEAQVLQVYLLPVHNPPASAAARPVDWSLRIARPRTSLVLESPRIAVRPHGDEISV 85
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--DRH 142
G++WSD P +++ +L+ F+ +G++ + + + AD+++ +R+F+ +
Sbjct: 86 YQGARWSDPAPSLLRDRLMQAFQADGRVRGLSSDDSNLQADFELGGDLRAFQTEYPNGQA 145
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
A+I +++ D +V + F V + ++ + + +A +S++++DWTL
Sbjct: 146 SALIRYDARLVRTDDKRVVASRRFEVSQPVDGKKVAAVVSAFGKAGDTLSAQVLDWTLRQ 205
Query: 203 LPL 205
Sbjct: 206 ASA 208
>gi|238784665|ref|ZP_04628670.1| hypothetical protein yberc0001_28090 [Yersinia bercovieri ATCC
43970]
gi|238714437|gb|EEQ06444.1| hypothetical protein yberc0001_28090 [Yersinia bercovieri ATCC
43970]
Length = 207
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 27 SSCFFHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
+ +Y L +T + + L +++P T + LNS I V+ EI
Sbjct: 23 CTILPTAPVSQVYLLPVPPATNAPRAQSVNWSLRVSQPATSQFLNSSRIAVQPQGQEIAV 82
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--DRH 142
S+WSD P +++ +LI F +G+I V + + AD ++ + +F+ D+
Sbjct: 83 YQNSRWSDPAPILVRNRLIQEFRADGRIRAVSSDDDSLQADVELSGDLSAFQGVYLTDKS 142
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+I +++ D ++ + F + + ++ +Q+ A ++++++++W L
Sbjct: 143 EVLIRFDARLVRISDRRIIATRHFEIRQPIKGTEMNEVVQAFGLASDQLATQVLNWMLQ 201
>gi|237808110|ref|YP_002892550.1| hypothetical protein Tola_1349 [Tolumonas auensis DSM 9187]
gi|237500371|gb|ACQ92964.1| protein of unknown function DUF330 [Tolumonas auensis DSM 9187]
Length = 207
Score = 180 bits (457), Expect = 9e-44, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 85/179 (47%), Gaps = 3/179 (1%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKY-DESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
S S F PVN+Y L EST +S L I P + L+S I V +I
Sbjct: 18 SACSLFPETRPVNVYMLPESTPVQTQSSSVDWSLRINTPYANQTLDSTRIAVIPDGNQIN 77
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--DR 141
++W+D++P +++ +LI F ++G+I T+ N I D ++IS +R+F+ +
Sbjct: 78 SYKSARWNDRVPVLLRERLIDTFRSDGRIKTITNDNGLINTDAELISELRAFQSEYIHGK 137
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+ + ++ ++ ++ F + + + +Q+ +A ++S E++ W +
Sbjct: 138 PEVRVQLDTHLVQRNNQQVLASYRFEARQASKDASVASVVQAFGQATDQLSREVVAWAI 196
>gi|70733609|ref|YP_257249.1| putative lipoprotein [Pseudomonas fluorescens Pf-5]
gi|68347908|gb|AAY95514.1| lipoprotein, putative [Pseudomonas fluorescens Pf-5]
Length = 209
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 39/204 (19%), Positives = 88/204 (43%), Gaps = 7/204 (3%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESV--QRHIQLIIT 60
K+ +++ +S +LA+ T S P++IY L S + L +
Sbjct: 2 KRAYRLLAPLGLSAALAL---TGACSILPKGEPLDIYRLPVSQAGATAPNQALPWSLQLL 58
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+P LNS I V I S+WSD P +++ +L+ F+ +G++ + +
Sbjct: 59 KPQAGDALNSARIAVIPQGNLISSYKASRWSDPAPILLRNRLLDGFQRDGRVQLLSTDDS 118
Query: 121 GIYADYQIISAIRSFEINIDRHCA--IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ D + +++F+ + A +I + ++I +D ++ + F V + L +
Sbjct: 119 NLQTDLALGGDLQAFQTEYQGNAAQVVIRLDARLIRGYDQKILASRRFEVRQALAETGVP 178
Query: 179 HFIQSLNRAFSRISSEIIDWTLSS 202
+ +A ++ +++DW +
Sbjct: 179 AVVTGFGQAGDALTRQVVDWAVGQ 202
>gi|238751980|ref|ZP_04613465.1| hypothetical protein yrohd0001_23850 [Yersinia rohdei ATCC 43380]
gi|238709814|gb|EEQ02047.1| hypothetical protein yrohd0001_23850 [Yersinia rohdei ATCC 43380]
Length = 205
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 81/184 (44%), Gaps = 4/184 (2%)
Query: 25 SLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
S + +Y L +T + L +++P T + +NS I V+ EI
Sbjct: 21 SACTILPSAPVSQVYLLPVPAATTAPHGQSVNWSLRVSQPATNQFINSSRIAVQPEGQEI 80
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--D 140
S+W+D P +++ +LI F +G+I V + + AD ++ + +F+
Sbjct: 81 AVYKNSRWTDPTPILVRNRLIQEFRTDGRIPAVSSDDDSLQADVELSGDLSAFQGVYLAG 140
Query: 141 RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+I +++ D ++ + F + + ++ I + A +++++++++WTL
Sbjct: 141 NSEVLIRFDARLVRISDRRIIATRHFEIRQPIKGSQMDEVIDAFGLASNQLATQVLNWTL 200
Query: 201 SSLP 204
P
Sbjct: 201 QQSP 204
>gi|330806716|ref|YP_004351178.1| Putative lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327374824|gb|AEA66174.1| Putative lipoprotein [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 211
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 83/203 (40%), Gaps = 6/203 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTEST-KYDESVQRHIQLIITE 61
K N+ I+ ++ LA + S P ++Y L + L +
Sbjct: 2 KPSNRFIRPLLL---LAGFVLVGGCSILPKAEPSDVYRLPVTQAPASAGAAVSWSLRLAN 58
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P ++LNS I V S+WSD P +++ +L+ F +G++ + +
Sbjct: 59 PQASEVLNSPKIAVIPQGNLFSSYAASRWSDPAPVLLRNRLLDGFAQDGRVRLLSVADSN 118
Query: 122 IYADYQIISAIRSFEINIDRHCA--IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ AD ++ +++F+ A +I + ++ D ++ + F V + L
Sbjct: 119 LQADLELGGQLQAFQTEYQGTAASVVIRLDALLVRGFDQRILASRRFEVRQPLSDVKVPA 178
Query: 180 FIQSLNRAFSRISSEIIDWTLSS 202
+ RA R+++E++ WTL
Sbjct: 179 VVDGFGRAGDRLTAEVVAWTLEQ 201
>gi|238764192|ref|ZP_04625145.1| hypothetical protein ykris0001_6580 [Yersinia kristensenii ATCC
33638]
gi|238697605|gb|EEP90369.1| hypothetical protein ykris0001_6580 [Yersinia kristensenii ATCC
33638]
Length = 194
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 81/190 (42%), Gaps = 4/190 (2%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIVR 76
+++ S + +Y L + + L +++P T + +NS I V+
Sbjct: 4 MLVILLSACTILPTAPISQVYLLPVPPAANAPRAQTVNWSLRVSQPATNQFINSSRIAVQ 63
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
EI S+W+D P +++ +LI F +G+I V + + AD ++ + +F+
Sbjct: 64 PDGQEIAVYKNSRWTDPAPILVRNRLIQEFRTDGRIPAVSSDDDSLQADVELSGDLSAFQ 123
Query: 137 --INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
+I +++ D ++ + F V + ++ + + A ++ S+
Sbjct: 124 GVYQAGNSEVLIRFDARLVRISDRRIMATRHFEVRQPIKGAQMNEVVAAFGLASDQLVSQ 183
Query: 195 IIDWTLSSLP 204
+++WTL P
Sbjct: 184 VLNWTLQQSP 193
>gi|238796787|ref|ZP_04640292.1| hypothetical protein ymoll0001_25890 [Yersinia mollaretii ATCC
43969]
gi|238719275|gb|EEQ11086.1| hypothetical protein ymoll0001_25890 [Yersinia mollaretii ATCC
43969]
Length = 207
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 40/202 (19%), Positives = 90/202 (44%), Gaps = 5/202 (2%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKI 67
++ + +++ S + +Y L +T + + L +++P T +
Sbjct: 6 RRTWLLMLSMLVMLLSACTILPTAPVSQVYLLPVPPATNTARAQTVNWSLRVSQPTTSQF 65
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
LNS I V+ EI S+WSD P +++ +LI F +G+I V + + AD +
Sbjct: 66 LNSSRIAVQPQGQEIAVYQNSRWSDPAPILLRNRLIQEFRADGRIRAVSSDDDSLQADVE 125
Query: 128 IISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ + +F+ D+ +I +++ D ++ F + + + +Q+
Sbjct: 126 LSGDLSAFQGVYLTDKSEVLIRFDARLVRISDRRIIATHHFEIRQPISGTKMDEVVQAFG 185
Query: 186 RAFSRISSEIIDWTL-SSLPLS 206
A ++++++++W L SLP S
Sbjct: 186 LASDQLAAQVLNWMLQQSLPSS 207
>gi|194364299|ref|YP_002026909.1| hypothetical protein Smal_0521 [Stenotrophomonas maltophilia
R551-3]
gi|194347103|gb|ACF50226.1| protein of unknown function DUF330 [Stenotrophomonas maltophilia
R551-3]
Length = 213
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 93/199 (46%), Gaps = 4/199 (2%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKY-DESVQRHIQLIITEPITEK 66
+ + +++ S+ LL V +Y + K Q QL++ +P +
Sbjct: 5 TLPRLLLATSMLALLGGCSILGSSEKTAVTLYSPSVQVKADPAWPQASWQLVLAKPSAAR 64
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
+++S I VR +P +++ G+ W+ MI+ L+ FE++G+I V + GI ADY
Sbjct: 65 MVDSPRINVRPTPSQLEIYKGASWAQPATDMIEDTLLRGFEDSGRIRGVARSTAGIRADY 124
Query: 127 QIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
++ + +R FE + +I ++ K+I+ D +V + F + + + +
Sbjct: 125 KLSTDVRRFESDYQGQATPTVVIEVNAKLIHVADQRVVADRTFRQSQPVGSTDVPAVTAA 184
Query: 184 LNRAFSRISSEIIDWTLSS 202
R +++ +++ WTL S
Sbjct: 185 FERGLQQLAQDVVGWTLQS 203
>gi|254470354|ref|ZP_05083758.1| membrane lipoprotein lipid attachment site containing protein
[Pseudovibrio sp. JE062]
gi|211960665|gb|EEA95861.1| membrane lipoprotein lipid attachment site containing protein
[Pseudovibrio sp. JE062]
Length = 261
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 53/204 (25%), Positives = 96/204 (47%), Gaps = 8/204 (3%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYD-ESVQRHIQLIITE 61
+KK ++ L L+ C + P +Y LT + Q+++
Sbjct: 24 GVFGSTLKKLVVGAVL----LGGLAGCG-ASGPEALYGLTAPRDVPVKVRASDYQVLVAT 78
Query: 62 PITEKILNSEDIIVRSSPIEI-QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P+ + L++ +I V I Y W+D LPR+ Q KL+ EN GK+ V +P Q
Sbjct: 79 PVALQALDTSNIAVTQGGGPIYSYFPKVAWTDTLPRVFQAKLVETLENTGKLRGVSQPGQ 138
Query: 121 GIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
G+ DYQ+ + +R+FE+ +D A + ++ +I++ D +G +VF D
Sbjct: 139 GLLIDYQLQTTLRAFELQVDGGDKAYVEVAARIVDDRDGRSIGMRVFAASVPTTGDTVTD 198
Query: 180 FIQSLNRAFSRISSEIIDWTLSSL 203
I +LN A + S+I W+++++
Sbjct: 199 AIPALNAASDNVLSQIASWSVNTV 222
>gi|182680398|ref|YP_001834544.1| hypothetical protein Bind_3498 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636281|gb|ACB97055.1| Mammalian cell entry related domain protein [Beijerinckia indica
subsp. indica ATCC 9039]
Length = 378
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 51/205 (24%), Positives = 104/205 (50%), Gaps = 5/205 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRH---IQLII 59
K ++ + + L+ P +YDLT + + Q++I
Sbjct: 173 KTFTDVLARNTGDFDKIIAGLVKLAGGGPEAKPKPVYDLTVTQATPAPAPKGKKLGQIVI 232
Query: 60 TEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
EP T + +++ ++ RS E QW+D +P+++Q K++ +FEN G I +V P
Sbjct: 233 AEPTTTVVFDTQRLLARSKDGEFTPQGEMQWADSIPKLVQEKMVQSFENEGLIGSVTAPV 292
Query: 120 QGIYADYQIISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+G+ YQ+++ IR+F + D R A + +S+K++N ++ K+FHV +E ++
Sbjct: 293 EGVTRQYQLLTDIRNFAVTSDSRPSADVELSVKLMNEE-GHVIAGKIFHVTVPVESEDTS 351
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
+ + ++AF++ +E+I WT ++
Sbjct: 352 KVVAAFSQAFNQAMTELISWTRQTI 376
>gi|254513148|ref|ZP_05125214.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
gi|221533147|gb|EEE36142.1| conserved hypothetical protein [Rhodobacteraceae bacterium KLH11]
Length = 212
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 100/195 (51%), Gaps = 8/195 (4%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIV 75
A+ CT L + + P ++Y LT + + ++ R Q+++ EP +N++ I V
Sbjct: 5 LAALAGCTGLGTLRQASKPNDLYLLTPKSTFSSALPRIQKQIVVEEPTATAAVNTDQIAV 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ +P+++QYL ++W D+ P ++Q ++ ++EN+GK++ V + G+ ADY I +R F
Sbjct: 65 QPTPLQVQYLPQARWVDRAPLIVQALMVESYENSGKVAAVGRSTVGLRADYVIAPDLREF 124
Query: 136 EINIDRHC-------AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ + + +++KII+ +D+ ++ F D +++ + A
Sbjct: 125 QGVVISQTEDATTVRVEVRINIKIIDEYDDKIIASSSFQETVLATSDQTSDLVEAFDIAL 184
Query: 189 SRISSEIIDWTLSSL 203
+ + ++W++ +
Sbjct: 185 GKAMRDCVEWSIRKI 199
>gi|190572711|ref|YP_001970556.1| hypothetical protein Smlt0659 [Stenotrophomonas maltophilia K279a]
gi|190010633|emb|CAQ44242.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
Length = 213
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 8/198 (4%)
Query: 13 IISCSLAVLLCTSLSSCF----FHNNPVNIYDLTESTKY-DESVQRHIQLIITEPITEKI 67
+ LA L T L C V +Y K Q QL++ +P ++
Sbjct: 6 LPRLLLAASLVTLLGGCSILGSSEKTAVTLYSPAVQVKADPAWPQASWQLVLAKPSAARM 65
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
++S I VR +P +++ G+ W+ MI+ L+ FE++G+I V + GI ADY+
Sbjct: 66 VDSPRINVRPTPSQLEIYKGASWAQPATDMIEDTLLRGFEDSGRIHGVARSTAGIRADYK 125
Query: 128 IISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
+ + +R FE + +I ++ K+I+ D +V + F + + + +
Sbjct: 126 LSTDVRRFESDYQGQATPTVVIEVNAKLIHVADQRVVADRTFRQAQPVGSTDVPAVTAAF 185
Query: 185 NRAFSRISSEIIDWTLSS 202
R +++ +++ WTL S
Sbjct: 186 ERGLQQLAQDVVGWTLVS 203
>gi|328543115|ref|YP_004303224.1| Putative ABC transporter protein [Polymorphum gilvum SL003B-26A1]
gi|326412861|gb|ADZ69924.1| Putative ABC transporter protein [Polymorphum gilvum SL003B-26A1]
Length = 200
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 1/173 (0%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWS 91
P +Y LT + R +Q+++ P K L++ +I V Y + W+
Sbjct: 28 STAPSALYGLTAPDDIADGRSRPVQVLVPAPRALKALDTGNIAVVDKGPAYSYFPQAAWA 87
Query: 92 DKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSL 150
D LP ++Q KL+ EN G++ V P +G+ D+Q+ + +RSFE+NID A++ ++
Sbjct: 88 DTLPNVVQAKLVQTLENTGRLRGVGLPGEGLLIDFQLQTDLRSFELNIDGPDRAVVEIAA 147
Query: 151 KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
K+IN + V +VF + ++NRA ++ EI W L +
Sbjct: 148 KLINDRNGRTVASRVFTAVVPAGGTTVDRAVAAMNRAADQVFREIAVWVLDKV 200
>gi|226942631|ref|YP_002797704.1| hypothetical protein Avin_04750 [Azotobacter vinelandii DJ]
gi|226717558|gb|ACO76729.1| conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 205
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 40/188 (21%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKILNSEDIIVR 76
A+L + S P++IY L + + L I P +++L S I V
Sbjct: 10 ALLGSLTACSVLPEAEPIHIYRLPGTPLQAQPATARLDQALRIATPKADRMLGSARIAVM 69
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
I G++WSD P +++ +LI F +G+ ++V + +YAD +++ +RSF
Sbjct: 70 PEGNRISNYQGARWSDDAPTLLRDRLIEAFREDGRTASVSSDDNHLYADLELLGDLRSFH 129
Query: 137 INI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
+ + + + ++++ ++ + F V + + + + A R+S +
Sbjct: 130 SEYVDGQPQVRLGLDVSLVHSASQRILASRRFEVRQSVSDGRLDSVVAAFGAASDRLSRQ 189
Query: 195 IIDWTLSS 202
++DWTL+
Sbjct: 190 LVDWTLAQ 197
>gi|254522526|ref|ZP_05134581.1| lipoprotein [Stenotrophomonas sp. SKA14]
gi|219720117|gb|EED38642.1| lipoprotein [Stenotrophomonas sp. SKA14]
Length = 213
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 46/203 (22%), Positives = 92/203 (45%), Gaps = 8/203 (3%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCF----FHNNPVNIYDLTESTKY-DESVQRHIQLIITEP 62
+ + LA + T L C V +Y K Q QL++ +P
Sbjct: 1 MSTTTLPRLLLAASMVTLLGGCSILGSSEKTAVTLYSPAVQVKADPAWPQASWQLVLAKP 60
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
++++S I VR +P +++ G+ W+ MI+ L+ FE++G+I V + + GI
Sbjct: 61 SAARMVDSPRINVRPTPSQMEIYKGASWAQPATDMIEDTLLRGFEDSGRIRGVARSSAGI 120
Query: 123 YADYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
ADY++ + +R FE + +I ++ K+I+ D +V + F + + +
Sbjct: 121 RADYKLSTDVRRFESDYQGQATPTVVIEVNAKLIHVADQRVVADRTFRQAQPVGSTDVPA 180
Query: 180 FIQSLNRAFSRISSEIIDWTLSS 202
+ R +++ +++ WTL S
Sbjct: 181 VTAAFERGLQQLAQDVVGWTLVS 203
>gi|260430757|ref|ZP_05784729.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260418198|gb|EEX11456.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 214
Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 97/200 (48%), Gaps = 8/200 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDII 74
+ CT L + + P ++Y LT + + S+ R Q+++ EP ++++ I
Sbjct: 6 LLAGLTGCTGLGTLKQASQPNDLYLLTPKSTFSSSLPRVSKQIVVQEPTATAAVDTDQIA 65
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
V+ +P+++QYL ++W D+ P ++Q L+ +FEN+ +++ V + G+ ADY I+ +R
Sbjct: 66 VQPTPLQVQYLPRARWVDRAPLIVQALLVESFENSNRVAAVGRSTVGLRADYVIVPDLRE 125
Query: 135 FEINIDRHCA-------IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
F+ + + +++KII+ ++ ++ F + D + + ++A
Sbjct: 126 FQGIVVGETQDSKTVKIDVRINIKIIDEFEDKIIASNSFQRDVIAASDQTPDLVAAFDQA 185
Query: 188 FSRISSEIIDWTLSSLPLSD 207
++W++ +
Sbjct: 186 LGSTMRNAVEWSIRKIHAHA 205
>gi|163759627|ref|ZP_02166712.1| putative ABC transporter protein [Hoeflea phototrophica DFL-43]
gi|162283224|gb|EDQ33510.1| putative ABC transporter protein [Hoeflea phototrophica DFL-43]
Length = 199
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 64/199 (32%), Positives = 115/199 (57%), Gaps = 1/199 (0%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE 65
++ ++I +L+ + P + Y L+ + R+ Q++I+EP
Sbjct: 1 MRLKPARLIVAITLLLVLAGCGGGLGGSTPPDTYGLSPAPAVTGDSARNRQILISEPTAL 60
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
K L+SE I++R SP IQYL SQWSD+LP+++Q KL+ FEN+G++ V +P +G+ D
Sbjct: 61 KALDSEQIVIRPSPSAIQYLADSQWSDRLPKIVQDKLVQAFENSGRVGGVGRPGEGLAID 120
Query: 126 YQIISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
++II+AIRSFEI D A++ +S K++N + + +VF + ++++L
Sbjct: 121 FKIITAIRSFEIRADAGEQAVVEISAKVLNDRNGVVAATRVFRGNSSVTGTGNAAYVRAL 180
Query: 185 NRAFSRISSEIIDWTLSSL 203
+RAF + ++++ WTLS +
Sbjct: 181 DRAFETVVADLVTWTLSRI 199
>gi|119390266|pdb|2IQI|A Chain A, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390267|pdb|2IQI|B Chain B, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390268|pdb|2IQI|C Chain C, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390269|pdb|2IQI|D Chain D, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390270|pdb|2IQI|E Chain E, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390271|pdb|2IQI|F Chain F, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390272|pdb|2IQI|G Chain G, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
gi|119390273|pdb|2IQI|H Chain H, Crystal Structure Of Protein Xcc0632 From Xanthomonas
Campestris, Pfam Duf330
Length = 192
Score = 173 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
Query: 30 FFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGS 88
P IY T T Q QL++ +P +I++S I VR +P E+Q G+
Sbjct: 4 LGDQKPATIYAPTVRVTPNPAWPQVSWQLLVAKPSAARIIDSPRINVRPTPGELQVYHGA 63
Query: 89 QWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR---HCAI 145
W+ M++ ++ FE++GKI+ V + GI +DY++ +R FE + A
Sbjct: 64 GWAQPATDMLEDSVVRAFEDSGKIAAVARIGAGIRSDYKLAIDVRRFESDYAGQSLPAAT 123
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
I ++ K++++ D +V + F V + + +A +++++E++ WTL
Sbjct: 124 IELNAKLLHSSDQRVVASRTFTVARPSSSTDTAAVAAAFEQALTQVTTELVGWTL 178
>gi|285019446|ref|YP_003377157.1| secreted protein [Xanthomonas albilineans GPE PC73]
gi|283474664|emb|CBA17163.1| putative secreted protein [Xanthomonas albilineans]
Length = 215
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 4/187 (2%)
Query: 25 SLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
S + IY T Q QL +T+P ++++S I VR +P E+Q
Sbjct: 19 GCSLAGGNKESATIYAPDARVTPDPAWPQVTWQLALTKPSATRMIDSPRIAVRPTPDELQ 78
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR-- 141
G W+ M + L+ FE++G+I V + GI ADY+++ +R FE +
Sbjct: 79 VYSGVSWAQPATDMFEDTLLRAFEDSGRIPGVARLGTGIGADYKLLLDLRRFESDYAGHD 138
Query: 142 -HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
A I ++ K+++ D +V F V + + + + +A S++S ++ WTL
Sbjct: 139 VPAATIELNAKLLHTVDQRVVSSHTFLVTQTAGGTTEAQVVDAFGQALSQLSRAVVGWTL 198
Query: 201 SSLPLSD 207
Sbjct: 199 QQGQADA 205
>gi|206575545|ref|YP_002235752.1| hypothetical protein KPK_A0104 [Klebsiella pneumoniae 342]
gi|206570389|gb|ACI12035.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
Length = 214
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 84/187 (44%), Gaps = 5/187 (2%)
Query: 17 SLAVLLCTSLSSC-FFHNNPVN-IYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDI 73
L VL+C L++C PV+ ++ L S + L + +P T + +NS I
Sbjct: 18 LLIVLVCLPLAACTVLPQRPVSQVWLLPAQPGVPASGPTINRSLRVMQPSTSQFINSSRI 77
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
V+ EI GS+WSD +P + + +L +G+ +V + AD+++ +
Sbjct: 78 AVQPQGAEITVYSGSRWSDSVPVLFRNRLTQELRTDGRFISVSSDEDNLQADFELGGDLS 137
Query: 134 SFEINIDR--HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
SF+ +I +++ D ++ + F + + + + +++ A R+
Sbjct: 138 SFQGVYRGKKGEVLIQFDARLVQTSDRRVIASQRFVIHQPISGSSMNEVVEAFGLASDRL 197
Query: 192 SSEIIDW 198
+++I+ W
Sbjct: 198 AADILRW 204
>gi|118588761|ref|ZP_01546169.1| putative ABC transporter protein [Stappia aggregata IAM 12614]
gi|118438747|gb|EAV45380.1| putative ABC transporter protein [Stappia aggregata IAM 12614]
Length = 201
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 46/205 (22%), Positives = 95/205 (46%), Gaps = 6/205 (2%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTES-TKYDESVQRHIQLII 59
M K + ++ +++ +L + +S + P Y + + + +Q+++
Sbjct: 1 MTKATTDMTRRGVLTALGLGVLVSGCAS----STPSAYYSIGAADVGGLQGRSSRVQVLV 56
Query: 60 TEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
P K L++ I V Y S W+D LP ++Q KL+ +N ++ V P
Sbjct: 57 AAPRALKALDTSYIAVVDKGPVYSYFPDSAWADSLPNVVQSKLVETLQNTNRLRGVGLPG 116
Query: 120 QGIYADYQIISAIRSFEIN-IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
G+ DYQ+ + IR+FE+ + ++ +S +I+N + V KVF E +
Sbjct: 117 DGLLIDYQLQTEIRAFELQLAGANRGVVEISARIVNDRNGQTVANKVFRAETSAGSTSVN 176
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
++++N + R+ +E+ WTL ++
Sbjct: 177 KAVEAMNASADRVFAEMAAWTLQNV 201
>gi|307945710|ref|ZP_07661046.1| lipoprotein [Roseibium sp. TrichSKD4]
gi|307771583|gb|EFO30808.1| lipoprotein [Roseibium sp. TrichSKD4]
Length = 194
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 50/195 (25%), Positives = 95/195 (48%), Gaps = 5/195 (2%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILN 69
++ ++ A LL ++ + P +Y L +T E ++ Q+++ P K L+
Sbjct: 4 RRNVLIWLGASLLVAGCAA----SGPAALYGLNAATSQVEGRRKSRQVLVPRPRALKALD 59
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E I V + Y W+D LP ++Q K++ +N + V P G+ DYQ+
Sbjct: 60 TEYIAVVNQGPVYSYYPKVSWADALPSLVQTKVVETLQNTNLLRGVGLPGDGLLIDYQLQ 119
Query: 130 SAIRSFEIN-IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
IRSFEI + A++ ++ K++N + V +VF E + +++LNRA
Sbjct: 120 LEIRSFEIQLANADKAVVAIAAKLVNDRNGRTVSNRVFRAEIPASATSADKAVEALNRAA 179
Query: 189 SRISSEIIDWTLSSL 203
++ S+I WT+ ++
Sbjct: 180 DQVFSDIALWTVQNV 194
>gi|170748373|ref|YP_001754633.1| hypothetical protein Mrad2831_1955 [Methylobacterium radiotolerans
JCM 2831]
gi|170654895|gb|ACB23950.1| protein of unknown function DUF330 [Methylobacterium radiotolerans
JCM 2831]
Length = 192
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 47/176 (26%), Positives = 97/176 (55%), Gaps = 2/176 (1%)
Query: 26 LSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
L C P+ +DL + ++++EP++ + ++ IIVR + + +L
Sbjct: 17 LGGCGGAA-PL-TFDLAALPAAGRPIAAGRSIVVSEPVSIQPFEADRIIVRENGGALSFL 74
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI 145
G QW+D+LPR+IQ +LI + EN+G++ +V +P + ADYQ+IS IR+F++ A+
Sbjct: 75 GGGQWADRLPRLIQTRLIQSLENSGRLRSVSRPGDKVVADYQLISEIRAFDVQSGTGEAV 134
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+ +SLK++ + ++F + K + ++L++A + + ++++ W S
Sbjct: 135 VDLSLKLVADGTGKVAAARIFTARVPVSKIDAGSGARALDQALTVVLADVVRWVNS 190
>gi|154248037|ref|YP_001418995.1| hypothetical protein Xaut_4116 [Xanthobacter autotrophicus Py2]
gi|154162122|gb|ABS69338.1| protein of unknown function DUF330 [Xanthobacter autotrophicus Py2]
Length = 213
Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 46/191 (24%), Positives = 92/191 (48%), Gaps = 4/191 (2%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
++ + +L +L+ C + P Y+L+ + + + Q+++ P +LN+
Sbjct: 21 PRLAALLSGAVLTLALAGCG--STPTPTYNLSAPSGFTAGGSGNGQMVVVAPTALAVLNT 78
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
+ ++V P ++ YL +QWSD LP ++Q + I FEN K+ V +P G+ ADYQ++
Sbjct: 79 DKVMVEPGPGQVAYLSDAQWSDTLPALLQARTIQAFENASKLRRVARPGDGVNADYQLVI 138
Query: 131 AIRSF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
IR+F I A++ +S K+I ++ +VF +L+ A
Sbjct: 139 DIRTFALRITDQGPVAVVELSAKLIGTQSGRILAAQVFKAAVPAASTAGPVATAALDSAQ 198
Query: 189 SRISSEIIDWT 199
++ +++ W
Sbjct: 199 EQVLVQMVRWA 209
>gi|192293076|ref|YP_001993681.1| mammalian cell entry related domain protein [Rhodopseudomonas
palustris TIE-1]
gi|192286825|gb|ACF03206.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris TIE-1]
Length = 398
Score = 168 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 38 IYDLTESTKYDES-VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
+YDL+ +T + S QL I E T + +S+ +++ +E+ G+QWSD LP+
Sbjct: 203 VYDLSAATGFPPSSPPLKGQLTIPESNTVVLFDSQKMLLAP-GLEVPAFAGAQWSDSLPK 261
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIIN 154
M+Q KLI +FEN ++PN + DYQ+++ IRSF++ D A I S KII+
Sbjct: 262 MLQEKLIQSFENYDIAHAPMRPNDAVQPDYQLLTDIRSFQVIGEGDALRAEIAFSAKIID 321
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
D LV ++F L+K + + +++F I+ E++ W +L
Sbjct: 322 -KDGKLVAARLFQQASPLDKPEPAAAVSAFDKSFDTIAKELVPWAAQALAS 371
>gi|163793378|ref|ZP_02187353.1| hypothetical protein BAL199_02684 [alpha proteobacterium BAL199]
gi|159181180|gb|EDP65695.1| hypothetical protein BAL199_02684 [alpha proteobacterium BAL199]
Length = 211
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 37/202 (18%), Positives = 83/202 (41%), Gaps = 6/202 (2%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVN-IYDLTESTKYDESVQ-RHIQLIITEPIT 64
++++ + +A L+ + S P +Y LT + + ++ QL + P +
Sbjct: 5 RLVRNAVGGALIAALVMVAGCSGLSLGGPSQQLYTLTPKSTFPANLPTVDWQLAVDRPSS 64
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
L + I V I Y G+QW D P M+Q LI +FEN+ I V + + + +
Sbjct: 65 PAGLATTRIAVIRGAHRIDYYAGAQWIDDAPNMVQRLLIESFENSKAIIGVGRESVSLRS 124
Query: 125 DYQIISAIRSFEINIDR----HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
D+ + +R F+ + ++ K++ ++ +
Sbjct: 125 DFVLRVELREFQAEYQEGVEAPKVNVRINAKLVRMPQRRIIASTTVERVIASPDNKIHSI 184
Query: 181 IQSLNRAFSRISSEIIDWTLSS 202
+ + ++A ++ +I+ WT++
Sbjct: 185 VDTFDQALGKVLRDIVVWTVTR 206
>gi|77456268|ref|YP_345773.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
gi|77380271|gb|ABA71784.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 208
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 80/192 (41%), Gaps = 5/192 (2%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR---HIQLIITEPITEKILNSED 72
LA S S + P+++Y L + + H L + + + LN
Sbjct: 7 ALLAGFTLISACSILPKSEPLDVYRLPAAQAPASAGSSATQHWSLRLNKLQASEALNRPS 66
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
I V I S+WSD P +++ +L+ F+ +G++S + + AD ++ ++
Sbjct: 67 IAVIPQGDVISSYKASRWSDPAPVLVRNRLLDGFQRDGRVSLLSTDDSNFQADLELGGSL 126
Query: 133 RSFEINIDRHCA--IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
++F+ A ++ + ++ +D ++ + F + L + +A R
Sbjct: 127 QAFQTEYQGTQASVVVRVDALLVRGYDQRILASRRFEERQPLSDVQVPAVVAGFGQASDR 186
Query: 191 ISSEIIDWTLSS 202
++++++ W +
Sbjct: 187 LTAKVVAWAVEQ 198
>gi|39937296|ref|NP_949572.1| hypothetical protein RPA4236 [Rhodopseudomonas palustris CGA009]
gi|39651154|emb|CAE29677.1| Mce4/Rv3499c/MTV023.06c protein [Rhodopseudomonas palustris CGA009]
Length = 398
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 38 IYDLTESTKYDES-VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
+YDL+ +T + QL I E T + +S+ +++ +E+ G+QWSD LP+
Sbjct: 203 VYDLSAATGFPPPSPPLKGQLTIPESNTVVLFDSQKMLLAP-GLEVPAFAGAQWSDSLPK 261
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIIN 154
M+Q KLI +FEN ++PN + DYQ+++ IRSF++ D A I S KII+
Sbjct: 262 MLQEKLIQSFENYDIAHAPMRPNDAVQPDYQLLTDIRSFQVIGEGDALRAEIAFSAKIID 321
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
D LV ++F L+K + + +++F I+ E++ W +L
Sbjct: 322 -KDGKLVAARLFQQASPLDKPEPAAAVSAFDKSFDTIAKELVPWAAQALAS 371
>gi|85714926|ref|ZP_01045911.1| ABC transporter substrate-binding protein [Nitrobacter sp. Nb-311A]
gi|85698123|gb|EAQ35995.1| ABC transporter substrate-binding protein [Nitrobacter sp. Nb-311A]
Length = 236
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 5/204 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI--QLIIT 60
+ ++ + + V L+ YDL ++ + R + L I
Sbjct: 35 QVFSEGLARNTDKLDGIVAGLERLTGGGTTPAKKITYDLRAASGFPNPPDRPLKKSLAIP 94
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
EP L+++ + + E + W+D +P ++Q KL+ +FEN ++
Sbjct: 95 EPTAVIKLDTQRFLFSPA-KEYPDFAEAMWADSIPNLLQAKLLESFENYDIAHAPLRSMD 153
Query: 121 GIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
G+ ADYQ++ IR F+I D A I +S +I+N + +V ++F KL+K
Sbjct: 154 GVKADYQLLIDIRRFQITTDPEPVADIGLSARILN-KNGKVVAARLFQDARKLDKIEPGA 212
Query: 180 FIQSLNRAFSRISSEIIDWTLSSL 203
+ N AF RI+ ++I WT+ +L
Sbjct: 213 ASAAFNDAFERIAKDMIAWTVKAL 236
>gi|209964742|ref|YP_002297657.1| lipoprotein, putative [Rhodospirillum centenum SW]
gi|209958208|gb|ACI98844.1| lipoprotein, putative [Rhodospirillum centenum SW]
Length = 224
Score = 165 bits (419), Expect = 2e-39, Method: Composition-based stats.
Identities = 38/202 (18%), Positives = 91/202 (45%), Gaps = 9/202 (4%)
Query: 10 KKKIISCSLAVLLCTSLS-SCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKI 67
+++++ + + L S + P +Y L+ + ++ + R QL++ P+
Sbjct: 7 RRRLLGLTATLPLLGGCSVADVLTPPPPRLYVLSPAREFTAGLPRVDWQLLVETPLANTG 66
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
+++ I + + + Y G+ W D+ P M QL LI +FEN+ +I V + G+ AD+
Sbjct: 67 IDTARIALGETQSRLTYFAGANWVDRAPSMAQLLLIESFENSNRIVAVGREATGLRADFI 126
Query: 128 IISAIRSFEINIDR-------HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ + +R F+ + + M+ K++ +V + F + +
Sbjct: 127 LKTDLRDFQAEYNGGTPGESRPVGRVRMTAKLVRMPRRIIVASESFEAQVPAKGSAFSDM 186
Query: 181 IQSLNRAFSRISSEIIDWTLSS 202
I++++ A + +++WT+
Sbjct: 187 IEAMDDALEAVMRRMVEWTIRQ 208
>gi|288962792|ref|YP_003453086.1| hypothetical protein AZL_e01970 [Azospirillum sp. B510]
gi|288915058|dbj|BAI76542.1| hypothetical protein AZL_e01970 [Azospirillum sp. B510]
Length = 213
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 36/182 (19%), Positives = 81/182 (44%), Gaps = 7/182 (3%)
Query: 27 SSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLI 86
S P ++Y LT + QL++ P +++ I + +P + Y
Sbjct: 26 CSTLNPTAP-HLYTLTPRAGVAPGPKADWQLLVETPAAAAGIDTPRIALARTPTSLDYFA 84
Query: 87 GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI- 145
W+D+ P M+Q ++ FE++G+I +V + G+ +DY + S +R F+ A
Sbjct: 85 DVSWADRAPNMVQGLVVQTFEDSGRIVSVGRDTVGLRSDYVLKSELRDFQAEYSTPGAAM 144
Query: 146 -----ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+ +S K++ S+ + F + + + + + A +++ ++++W+L
Sbjct: 145 PDRVHVRLSAKLVAMPRRSIEAGETFEASVPVRGRSFTDVVAAFDEALGKVTGDLVNWSL 204
Query: 201 SS 202
S
Sbjct: 205 SQ 206
>gi|300114236|ref|YP_003760811.1| hypothetical protein Nwat_1603 [Nitrosococcus watsonii C-113]
gi|299540173|gb|ADJ28490.1| protein of unknown function DUF330 [Nitrosococcus watsonii C-113]
Length = 217
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 101/205 (49%), Gaps = 8/205 (3%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIIT 60
+ +++++ S S+ + CT L + P+ + L S D S ++ L I
Sbjct: 11 RVISRMMFLAFASLSMTLPACTLL----PSSAPLQTFILPPSKPVDASNAAPLKAILRIA 66
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P +IL I+V + ++ G++WS P +++ L+ F NG+++ V+ N
Sbjct: 67 TPQANEILKGRRILVMPTSNQLNVYQGARWSLDAPSLLRDHLMDVFRRNGRLAGVIGENN 126
Query: 121 GIYADYQIISAIRSF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ +D+ ++S + +F E + A+I + +++I++ L+ + F V + + +
Sbjct: 127 PVDSDFLLLSELHAFHSEYRGKKPWAVIRLDVQLIDSTSRDLLASRRFSVPVESQDERLE 186
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSL 203
+++ +A +S ++++W+L ++
Sbjct: 187 SVVEAFGQAVDELSRQLVEWSLINI 211
>gi|316935756|ref|YP_004110738.1| mammalian cell entry related domain-containing protein
[Rhodopseudomonas palustris DX-1]
gi|315603470|gb|ADU46005.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris DX-1]
Length = 399
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 38 IYDLTESTKYDES-VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
+YDL + + QL I E T + +S+ +++ +EIQ G+QWSD +P+
Sbjct: 203 VYDLAAAAGFPPPSPPLKGQLTIPESNTVILFDSQKMLLAP-GLEIQAFAGAQWSDSIPK 261
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH--CAIITMSLKIIN 154
M+Q KLI +FEN ++PN + DYQ+++ IRSF++ +R A I S KII+
Sbjct: 262 MLQEKLIQSFENYDIAHAPMRPNDAVQPDYQLLTDIRSFQVVGERDNLKAEIAFSGKIID 321
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
D LV +VF L K + + + +++F I+ +++ WT +L
Sbjct: 322 -KDGKLVAARVFQQATTLAKPEPMAAVAAFDKSFDAIAKDLVPWTAQALAA 371
>gi|159044591|ref|YP_001533385.1| hypothetical protein Dshi_2047 [Dinoroseobacter shibae DFL 12]
gi|157912351|gb|ABV93784.1| conserved hypothetical protein [Dinoroseobacter shibae DFL 12]
Length = 208
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 50/199 (25%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 13 IISCSLAVLLCTSLSSC------FFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK 66
+ +CS+A+L +SLS C + +++Y+L E R ++I P T
Sbjct: 7 LKACSVALLTLSSLSGCAAVSALGSASEVLDVYELQAPRTLPEGPVRARDVVIELPTTTG 66
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
L ++ I++R P++ QYL G +W D P M+Q ++ E +G++ V + GI DY
Sbjct: 67 ALQTDRIMIRPDPLQAQYLPGVRWGDATPVMVQTLMLRTLEASGRLGYVGRRPLGINGDY 126
Query: 127 QIISAIRSFEINI--DRHCAIITMSL--KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
+++ I F+ + A++ +SL +++ D ++G + F V+ + ++ I
Sbjct: 127 AVLTEIVDFQAEAVPEGPGAVVVLSLIGRVVRESDLRIMGTRRFAVQVPVASVSEAEVIA 186
Query: 183 SLNRAFSRISSEIIDWTLS 201
++A ++ +E W LS
Sbjct: 187 GFDQAAQQLFAEHGAWVLS 205
>gi|86748500|ref|YP_484996.1| hypothetical protein RPB_1375 [Rhodopseudomonas palustris HaA2]
gi|86571528|gb|ABD06085.1| Mammalian cell entry related [Rhodopseudomonas palustris HaA2]
Length = 390
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 91/170 (53%), Gaps = 4/170 (2%)
Query: 38 IYDLTESTKYDESVQR-HIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
+YDL ++ + V+ QL I EP T + +S+ ++V +++ G+QWSD +P+
Sbjct: 203 VYDLQPASGFSPPVRSMKGQLTIPEPTTVVLYDSQKMLVAP-GLDLPAFAGAQWSDSIPK 261
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINA 155
M+Q KLI +FEN ++PN + DYQ++ IRSF++ + A ++ KII+
Sbjct: 262 MLQEKLIQSFENYDIARPPLRPNDAVTPDYQLLIDIRSFQVAGEGAPSADVSFGAKIID- 320
Query: 156 HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
+ LV ++F +L++ + + AF + E+I WT+ SL
Sbjct: 321 KNGRLVSARLFRQSARLDRPEPAAAVTAFETAFGAAAKELIPWTVDSLSS 370
>gi|149374949|ref|ZP_01892722.1| putative ABC-type uncharacterized transport system [Marinobacter
algicola DG893]
gi|149360838|gb|EDM49289.1| putative ABC-type uncharacterized transport system [Marinobacter
algicola DG893]
Length = 203
Score = 163 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 43/197 (21%), Positives = 88/197 (44%), Gaps = 7/197 (3%)
Query: 15 SCSLAVLLCTSLSSC-FFHNNPVN-IYDLTEST---KYDESVQRHIQLIITEPITEKILN 69
L V + T LS+C F + P N ++ L ST + L P+ E ++
Sbjct: 7 RALLCVTVATMLSACTLFPDRPANRLFQLPASTVETSITGNKPFSTTLRFVTPLAEGPVD 66
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S I+V+ EI+ G++WS+K P +++ +LI F +G+ + ++ +D +
Sbjct: 67 SSRILVKPEGNEIKAYQGARWSNKSPILVRDQLIDAFRRDGRFAGIITGTSPARSDLTMA 126
Query: 130 SAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ +F+ A+I + L +I+ + + K F + + +++ A
Sbjct: 127 GELSAFQSEYQDGMPVALIRLDLHLIDERTRNTLANKRFEYQHPATGEQVEAIVEAFGEA 186
Query: 188 FSRISSEIIDWTLSSLP 204
+ ++ E+I WT+ P
Sbjct: 187 SNALAREVIHWTVEQRP 203
>gi|182680566|ref|YP_001834712.1| hypothetical protein Bind_3671 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636449|gb|ACB97223.1| protein of unknown function DUF330 [Beijerinckia indica subsp.
indica ATCC 9039]
Length = 198
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 52/200 (26%), Positives = 105/200 (52%), Gaps = 5/200 (2%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + ++ + L + L +L+ C + P +DL+ S + QL I
Sbjct: 1 MKSEPASLLLSRGSWPGLLLGLSVTLAGC--ASGPPPTFDLSPSAGPFSVRAQRGQLAIA 58
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
EP+ + ++S+ I+VR + +L G+QW+D+LP ++Q +LI FEN + V +P
Sbjct: 59 EPVADVPIDSQRIVVRVQDDSVAFLRGAQWADRLPSLVQTRLIETFENAHLLREVGRP-- 116
Query: 121 GIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
G+ A+Y + + IR FE+ + ++ A++ ++ +++NA +V +VF + D+
Sbjct: 117 GMAANYTLSTEIRRFELAVGQNQAVVVIAAQLVNA-TGKIVHGRVFSAKAPAVHDDGASA 175
Query: 181 IQSLNRAFSRISSEIIDWTL 200
+L++A S++ +I+ W
Sbjct: 176 TAALDQALSQVMQQIVVWAA 195
>gi|90425516|ref|YP_533886.1| hypothetical protein RPC_4041 [Rhodopseudomonas palustris BisB18]
gi|90107530|gb|ABD89567.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB18]
Length = 367
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 38 IYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRM 97
+YDL +T QL I EP + +++ +++ ++ G QWSD +P++
Sbjct: 203 VYDLRAATDLPPGKPIKGQLAIAEPTYVVMFDTQRLLLAP-GLDYPAFAGFQWSDSIPKL 261
Query: 98 IQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAH 156
+Q KLI +FEN ++ + + AD+Q++ IRSF++ A + S KI+ +
Sbjct: 262 VQAKLIQSFENYDIAHAPLRASDALQADHQLLIDIRSFQVGGSPDLAAEVAFSAKIV-SK 320
Query: 157 DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
D V K+F L+K L + + N AF ++ E+I WT S+L
Sbjct: 321 DGKQVAAKLFRASAPLDKPEPLAALAAFNEAFGSVAKELIQWTASAL 367
>gi|92117462|ref|YP_577191.1| hypothetical protein Nham_1923 [Nitrobacter hamburgensis X14]
gi|91800356|gb|ABE62731.1| Mammalian cell entry related protein [Nitrobacter hamburgensis X14]
Length = 369
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 48/204 (23%), Positives = 96/204 (47%), Gaps = 5/204 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIIT 60
+ + + + V ++ + YDL + + +R ++ L+I
Sbjct: 168 QVFSDGLARNTDKLDGIVAGLERMTGGGVSSGQKVTYDLRAAHGFSSPPERTLKSKLVIP 227
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
EP L+++ + + E + W+D +P+++Q KL+ +FEN ++
Sbjct: 228 EPTAVIKLDTQRFLFSPA-KEYPGFAEAIWADSIPKLLQAKLLESFENYDIAHAPLRSMD 286
Query: 121 GIYADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
G+ DYQ++ IR F+I D A+ I +S +I+N D +V ++F +KL+K
Sbjct: 287 GVQGDYQLLIDIRRFQIATDPEPAVDIGLSARILN-KDGKVVAARLFQDTQKLDKIEPAA 345
Query: 180 FIQSLNRAFSRISSEIIDWTLSSL 203
+ N AF RI+ ++I WT+ ++
Sbjct: 346 ASAAFNDAFGRIAKDMIAWTVKAI 369
>gi|217969578|ref|YP_002354812.1| hypothetical protein Tmz1t_1157 [Thauera sp. MZ1T]
gi|217506905|gb|ACK53916.1| protein of unknown function DUF330 [Thauera sp. MZ1T]
Length = 247
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 37/216 (17%), Positives = 83/216 (38%), Gaps = 32/216 (14%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--------------------------- 50
L V+ S P+++Y L ST +
Sbjct: 26 LCVIALLPACSVLPEAAPLDVYVLPVSTGAPGASANMSPGNPIASPAATSTPAGGAPSAS 85
Query: 51 ---VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE 107
L + P L + I+V + G+ WSD P +++ +L+ F
Sbjct: 86 AAARALPWSLRVVRPAAGVHLAGQRIVVMPEGNRVSVYQGAGWSDPAPALLRDRLLEAFR 145
Query: 108 NNGKISTVVKPNQGIYADYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKV 165
+G++ + + ++AD+++ S +R+F+ R A++ + ++++ +V +
Sbjct: 146 ADGRVGALSSDERQLHADFELDSDLRAFQSEYRGGRPEAVLRLDARLVHTASRRIVASRT 205
Query: 166 FHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
F + +Q+ A R+S+E+++WT+
Sbjct: 206 FEQRQPTADPAVPAVVQAFGAAADRLSAEVVEWTVR 241
>gi|91975835|ref|YP_568494.1| hypothetical protein RPD_1355 [Rhodopseudomonas palustris BisB5]
gi|91682291|gb|ABE38593.1| Mammalian cell entry related [Rhodopseudomonas palustris BisB5]
Length = 390
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 84/173 (48%), Gaps = 5/173 (2%)
Query: 38 IYDLTESTKYDES-VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
+YDL + + QL I EP T + +S+ +++ +E+ G+QWSD +P+
Sbjct: 203 VYDLQPAKGFPPPTKSIRGQLTIPEPTTVVLYDSQKMLLAP-GLELPAFAGAQWSDSIPK 261
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC--AIITMSLKIIN 154
M+Q KLI +FEN ++PN + DYQ++ +RSF+I A + KII+
Sbjct: 262 MLQEKLIQSFENYDIAHPPLRPNDAVQPDYQLLIDLRSFQIAGREAELVAEVAFGAKIID 321
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPLSD 207
LV ++F KL+ + + + AF + +I WT+ SL
Sbjct: 322 -KGGKLVAARLFQQSAKLDNPHPAAAVTAFETAFDATAKALIPWTVDSLATGA 373
>gi|119897562|ref|YP_932775.1| hypothetical protein azo1271 [Azoarcus sp. BH72]
gi|119669975|emb|CAL93888.1| conserved hypothetical secreted protein [Azoarcus sp. BH72]
Length = 214
Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 41/205 (20%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTES-TKYDESVQRHIQLIITEPIT 64
++ + + ++ +L V S S PV++Y L + T S + L + +P T
Sbjct: 8 RRLHRLRPLATALLVAALASACSILPKPEPVDVYLLPATRTPPAASPALALALRVAKPET 67
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
L + I+V + G+ WSD P +++ +L+ F +G+I+ + ++ ++A
Sbjct: 68 SLHLAGQRIVVLPEGDRVSVYKGASWSDPAPLLVRNRLLDAFHGDGRIAALSSDDRSLHA 127
Query: 125 DYQIISAIRSF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
D ++ S +R+F E R A++ + +++ ++ + F V + ++
Sbjct: 128 DLELDSDLRAFHSEYRDGRPEAVVRLDARLVAPASLRILASRRFEVRHPAASADVKDVVR 187
Query: 183 SLNRAFSRISSEIIDWTLSSLPLSD 207
+ A +S+E++ WTL +
Sbjct: 188 AFGAAADALSAEVVAWTLENAAAPA 212
>gi|254453840|ref|ZP_05067277.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
gi|198268246|gb|EDY92516.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
Length = 215
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 43/209 (20%), Positives = 96/209 (45%), Gaps = 7/209 (3%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYD--ESVQRHIQLI 58
M + I + S+ + C++L + P+++YDL + + Q ++
Sbjct: 1 MIRAATHKIIATLTLLSV-LGGCSALGALGDVTTPLSVYDLRAPSGAPVIQGGQLAQDVV 59
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
+ P T +LN++ I++R ++ QYL +W D++P M+Q ++ + EN + V +
Sbjct: 60 VEIPTTSGVLNTDRIMIRPDTLQAQYLPDVRWGDEVPVMMQTLMLRSLENTNGLRYVGRR 119
Query: 119 NQGIYADYQIISAIRSFEI----NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
DY I++ + F+ + I M+ +++ D S+V + F ++
Sbjct: 120 PLAGSGDYAIVTELVDFQAELTPDGTGATVSIRMTSRLVRERDASIVASRTFRSQQAAAS 179
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ + + +RA + + DWT+++L
Sbjct: 180 TDTSAIVVAFDRASDALLVDFADWTITAL 208
>gi|300312195|ref|YP_003776287.1| ABC transporter auxiliary component protein [Herbaspirillum
seropedicae SmR1]
gi|300074980|gb|ADJ64379.1| ABC-type uncharacterized transport system, auxiliary component
protein [Herbaspirillum seropedicae SmR1]
Length = 204
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 36/203 (17%), Positives = 86/203 (42%), Gaps = 12/203 (5%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ------RHIQLIITE 61
+++ +++ SL + C+ L +P +Y L +T R L I
Sbjct: 5 LLRTSLVAASLMLAACSIL----PKPDPQAVYRLPTATAMPAQASTTAGDIRLRALRIAT 60
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P + ++SE I+V I+ G +WSD P + + +L+ F +G+ +
Sbjct: 61 PYANRSIDSERILVLPEGDVIKSYAGVRWSDAAPLLWRDRLLEAFRADGRYQRLSSDTGN 120
Query: 122 IYADYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
I AD ++ A+ +F+ +I ++I+ + + + F ++ ++
Sbjct: 121 IAADIELDGALSAFQTEYRHGVPTVVIVYDARLIDTANRQQLASQRFAIQRAVDGSKVPE 180
Query: 180 FIQSLNRAFSRISSEIIDWTLSS 202
+ + +A +++ E+++W +
Sbjct: 181 VVSAFGQACDQLAKEVVNWAAAQ 203
>gi|299132340|ref|ZP_07025535.1| protein of unknown function DUF330 [Afipia sp. 1NLS2]
gi|298592477|gb|EFI52677.1| protein of unknown function DUF330 [Afipia sp. 1NLS2]
Length = 370
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 40/201 (19%), Positives = 95/201 (47%), Gaps = 3/201 (1%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
+ + + + ++ +IYDL Y +QL I EP
Sbjct: 170 FAEGLARNTGRLDGIIAGLERMTGGGASETKKHIYDLEAVQTYVARSPLALQLAIPEPTV 229
Query: 65 EKILNSEDIIVRSSPIEIQY-LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
L+++ +++ + ++ +QW+D +P+++Q +LI +F N + ++P +G+
Sbjct: 230 ILALDTQRLVITPESENLDPSIVQAQWADSIPKLVQARLIESFANYSEERAPIRPTEGVQ 289
Query: 124 ADYQIISAIRSFEIN-IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
D ++S I+ F+++ A +++++KI+ +V ++F + + + +
Sbjct: 290 VDATLLSEIQRFQVDMTSNPTAEVSLAVKIV-GKSGKIVASRIFRASQPVAHLDAKTVVS 348
Query: 183 SLNRAFSRISSEIIDWTLSSL 203
+LN AFS ++ +I+ WT +L
Sbjct: 349 ALNWAFSDVTKQIVTWTAGNL 369
>gi|254501713|ref|ZP_05113864.1| hypothetical protein SADFL11_1751 [Labrenzia alexandrii DFL-11]
gi|222437784|gb|EEE44463.1| hypothetical protein SADFL11_1751 [Labrenzia alexandrii DFL-11]
Length = 165
Score = 158 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 1/163 (0%)
Query: 42 TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLK 101
+Q+++ P K L++ I V S Y W+D LP ++Q K
Sbjct: 3 AADVGGLSGRSSRVQVLVAPPRALKALDTTYIAVVDSGPVYSYFPNVAWADTLPNVVQNK 62
Query: 102 LIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSL 160
L+ +N G++ V P G+ DYQ+ + IR+FE+NI+ + ++ ++ +++N +
Sbjct: 63 LLQTLQNTGRLRGVGLPGDGLLIDYQLQTDIRAFELNIEGANRGVVEIAARVVNDRNGRT 122
Query: 161 VGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
V VF E + ++++N++ ++ ++I WTL ++
Sbjct: 123 VANNVFRRETPSGSSDVEKAVEAMNQSAEQVFADIAAWTLRNV 165
>gi|254486952|ref|ZP_05100157.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214043821|gb|EEB84459.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 205
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 91/195 (46%), Gaps = 3/195 (1%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILN 69
+ ++ A+ C+++S+ P++ +DL + + L++ P +
Sbjct: 9 RIALLGGISALGGCSAVSALNSAAIPLDTFDLLPAAGTTTGRRTSHSLLVALPQAPAAIA 68
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S+ I+V+ P I YL G++WSD+ P ++Q LI + + G+I V + G D ++
Sbjct: 69 SDRIVVKPDPASITYLPGARWSDEAPVLLQSLLIRSIASTGRIGYVGRSEGGPVPDTALL 128
Query: 130 SAIRSFEINIDRHC---AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ +FE+NI A++ ++L ++N + +++ + F + D + +
Sbjct: 129 VRMDAFEVNITPDGTMLAVVDIALTVLNDSNQNVIANRSFSQSAAADSDAPGAVVAAFQA 188
Query: 187 AFSRISSEIIDWTLS 201
A + + + DW +
Sbjct: 189 ALNGLLPAMADWAMR 203
>gi|146342152|ref|YP_001207200.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
ORS278]
gi|146194958|emb|CAL78983.1| Putative ABC transporter (substrate binding protein)
[Bradyrhizobium sp. ORS278]
Length = 366
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 42/203 (20%), Positives = 87/203 (42%), Gaps = 5/203 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKY-DESVQRHIQLIITE 61
K + + + V ++ V YDLT + QL I E
Sbjct: 167 KTFSDGLARNTGKLDGIVSGLEKMTGGGAPAQKV-TYDLTAPRDLGPVNKTIKGQLAIPE 225
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P +L ++ ++ + W+D +P+++Q +LI FEN ++ +
Sbjct: 226 PTAVAMLQTQRMLFSPAKD-YPGFGDVLWADSIPKLLQARLIDTFENYDVAHAPLRASDL 284
Query: 122 IYADYQIISAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
D Q++ +R F IN+D A I +S ++++ ++ ++F + + + N
Sbjct: 285 GQPDVQLLIDVRRFRINVDATAVADIGLSARLVD-KSGKIIASRLFDESQPVGQINPADA 343
Query: 181 IQSLNRAFSRISSEIIDWTLSSL 203
+ + ++AF R++ I+ WT+ SL
Sbjct: 344 VAAFDQAFGRLAKSILAWTVQSL 366
>gi|327478707|gb|AEA82017.1| putative lipoprotein [Pseudomonas stutzeri DSM 4166]
Length = 206
Score = 157 bits (398), Expect = 6e-37, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDII 74
VL + + P+ +Y L + + +R Q L I P +IL I
Sbjct: 11 ALACVLGTLAACTLLPEAEPIRVYLLPTAEATGQQGERLQQALRIHTPHASRILAGPRIA 70
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
V +I G++WSD P +++ +LI F +G + V + ++A+ ++ S +R+
Sbjct: 71 VVPDGNQISSYQGARWSDAAPTLLRDRLIEQFRQSGPV-AVSNEDSNLFAELELFSELRA 129
Query: 135 FEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F+ + ++ + ++ +A D ++ + F + + + + +A +S
Sbjct: 130 FQSEYIDGQPQVLVRLDAQLASATDQRILASRRFEIRQPSAGPQLESVVAAFGQASDELS 189
Query: 193 SEIIDWTL 200
++ WT+
Sbjct: 190 RQLQCWTI 197
>gi|114570551|ref|YP_757231.1| hypothetical protein Mmar10_2001 [Maricaulis maris MCS10]
gi|114341013|gb|ABI66293.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 209
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 89/200 (44%), Gaps = 7/200 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE 65
++ ++ ++ S L ++ S + PV++Y L+ + + + I P
Sbjct: 4 SRYLRAALVGVS--ALSVSACVSLLPESEPVSVYRLSSPEPVELQGESWTVIEIDVPNAP 61
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
+ L+ + I + + Y+ G++W PR++Q L+ +F +G ++ + GI AD
Sbjct: 62 RGLSGDQIAIMQDGSSLAYIQGARWISPTPRLLQSLLVESFNAHGGRLAPIRSDDGIRAD 121
Query: 126 YQIISAIRSFEINIDRHC-----AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
Y++ ++ FE DR + +S++++ H G +V E + +
Sbjct: 122 YELRLDMQEFEAVYDRGADIAPLVRVRISVRLVAEHGRRFAGARVVTAEVRASANRTSAI 181
Query: 181 IQSLNRAFSRISSEIIDWTL 200
+ + ++A S EI DWT
Sbjct: 182 VAAFDQASQTASREIADWTA 201
>gi|146280485|ref|YP_001170638.1| putative lipoprotein [Pseudomonas stutzeri A1501]
gi|145568690|gb|ABP77796.1| lipoprotein, putative [Pseudomonas stutzeri A1501]
Length = 206
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 36/188 (19%), Positives = 81/188 (43%), Gaps = 4/188 (2%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDII 74
VL + + P+ +Y L + + +R Q L I P +IL I
Sbjct: 11 ALACVLGTLAACTLLPEAEPIRVYLLPTAEATGQQGERLQQALRIHTPHASRILAGPRIA 70
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
V +I G++WSD P +++ +LI F +G + V + ++A+ ++ S +R+
Sbjct: 71 VVPDGNQISSYQGARWSDAAPTLLRDRLIEQFRQSGPV-AVSNEDSNLFAELELFSELRA 129
Query: 135 FEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F+ + ++ + ++ +A D ++ + F + + + + +A +S
Sbjct: 130 FQSEYIDGQPQVLVRLDAQLASATDQRILASRRFEIRQPSAGPQLESVVAAFGQASDELS 189
Query: 193 SEIIDWTL 200
++ WT+
Sbjct: 190 RQLQRWTI 197
>gi|148257021|ref|YP_001241606.1| ABC transporter substrate-binding protein [Bradyrhizobium sp.
BTAi1]
gi|146409194|gb|ABQ37700.1| Putative ABC transporter (substrate binding protein)
[Bradyrhizobium sp. BTAi1]
Length = 367
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 37/203 (18%), Positives = 87/203 (42%), Gaps = 5/203 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDE-SVQRHIQLIITE 61
+ + + + V ++ V YDL + + QL I E
Sbjct: 168 RTFSDGLARNTGKLDSIVSGLEKMTGGGAPAQKV-TYDLRAPRDFGPIAKTIKGQLAIPE 226
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P +L ++ I+ + + W+D +P+++Q +LI FEN ++
Sbjct: 227 PTAVAMLQTQRILFSPAKD-YPGFGDALWADSIPKLLQARLIDAFENYDIAHAPLRTADL 285
Query: 122 IYADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
D Q++ +R F IN D + I +S ++++ ++ ++F + +++ +
Sbjct: 286 GQPDVQLLVDVRRFRINTDPTAVVEIGLSARLVD-KSGKIIASRLFDESQPVDRLDPAIA 344
Query: 181 IQSLNRAFSRISSEIIDWTLSSL 203
+ + ++AF R++ ++ WT+ +L
Sbjct: 345 VTAFDQAFGRVAKSLLTWTVQAL 367
>gi|52842261|ref|YP_096060.1| hypothetical protein lpg2044 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|52629372|gb|AAU28113.1| conserved domain protein [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
Length = 200
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+++S +L +L SC PV N Y LT STK R I + +T P
Sbjct: 2 RVLSSVCFILGILTLMSCSPVKVPVTNEYQLTAYSTKQLTRKPRPITIQVTVPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E+++ P +++ + + W+ M+ L+ + +++G V ADY++
Sbjct: 62 TEEMLYMKKPFKLEPFVKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKII--NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + E N + +++ S KI+ + DN ++G ++ ++ +D + + N+A
Sbjct: 122 TQLLKLEQNFIKKPSVLEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQA 181
Query: 188 FSRISSEIIDWTLSSL 203
R ++ D+ +S +
Sbjct: 182 TFRFTATATDFVVSHI 197
>gi|319788028|ref|YP_004147503.1| hypothetical protein Psesu_2440 [Pseudoxanthomonas suwonensis 11-1]
gi|317466540|gb|ADV28272.1| protein of unknown function DUF330 [Pseudoxanthomonas suwonensis
11-1]
Length = 219
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 75/182 (41%), Gaps = 7/182 (3%)
Query: 27 SSCFFHNN---PVNIYDLTE-STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
+ C V IY + QL I P ++L+S I VR P E+
Sbjct: 26 AGCSLGGKRRDAVTIYAPEAIAVADPSWPTVDWQLAIARPSAPRLLDSPRIGVRPVPGEL 85
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--- 139
Q G+ W+ M++ ++ E++GKI V + G+ A Y++ IR FE +
Sbjct: 86 QVYKGAVWAQTPADMLEASVLRVLEDSGKIEAVGRQAAGLRAHYRLTMDIRRFEADYRGG 145
Query: 140 DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
D A + + K+++ D +V F + ++A + +S EI WT
Sbjct: 146 DMPVASLEVVAKLVHNIDQRVVASHSFARTLPASSTGIASVAAAFDQALAEVSGEIAGWT 205
Query: 200 LS 201
L+
Sbjct: 206 LA 207
>gi|209885949|ref|YP_002289806.1| putative ABC transporter [Oligotropha carboxidovorans OM5]
gi|209874145|gb|ACI93941.1| putative ABC transporter [Oligotropha carboxidovorans OM5]
Length = 371
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 94/202 (46%), Gaps = 4/202 (1%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESV-QRHIQLIITEPI 63
+ + + + ++ ++YDL+ Y + +QL I EP
Sbjct: 170 FAEGLARNTGRLDGILAGLERMTGGGEPQAQKHVYDLSAVQTYAATRTPLTLQLAIPEPT 229
Query: 64 TEKILNSEDIIVRSSPIEI-QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
L+++ +IV + + +QW+D +P+++Q +L+ +FEN + V+P G+
Sbjct: 230 VILALDTQRLIVTPEGDALDASIAQAQWADSIPKLVQARLLESFENYSEEKAPVRPTDGV 289
Query: 123 YADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
D ++S IR F ++ A I++S+K++ A +V ++F + + + +
Sbjct: 290 QTDATLLSEIRRFGVDTSGSPTAEISLSVKLV-AKSGQIVASRIFRSNQPVAHLDAKTAV 348
Query: 182 QSLNRAFSRISSEIIDWTLSSL 203
+++RAF+ + +I+ W L
Sbjct: 349 SAIDRAFTDTAKQIVTWAADKL 370
>gi|54297972|ref|YP_124341.1| hypothetical protein lpp2027 [Legionella pneumophila str. Paris]
gi|53751757|emb|CAH13179.1| hypothetical protein lpp2027 [Legionella pneumophila str. Paris]
Length = 200
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+++S +L +L SC PV N Y LT STK R I + +T P
Sbjct: 2 RVLSSVCLILGILTLMSCSPVKVPVTNEYQLTAYSTKQLTRKPRPITIQVTVPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E+++ P +++ + + W+ M+ L+ + +++G V ADY++
Sbjct: 62 TEEMLYMKKPFKLEPFVKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKII--NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + E N + +++ S KI+ + DN ++G ++ ++ +D + + N+A
Sbjct: 122 TQLLKLEQNFIKKPSVLEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQA 181
Query: 188 FSRISSEIIDWTLSSL 203
R ++ D+ +S +
Sbjct: 182 TFRFTATATDFVVSHI 197
>gi|307610775|emb|CBX00387.1| hypothetical protein LPW_21081 [Legionella pneumophila 130b]
Length = 200
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+++S +L +L SC PV N Y LT STK R I + +T P
Sbjct: 2 RVLSSVCFILGILTLMSCSPVKVPVTNEYQLTAYSTKQLTRKPRAITIQVTVPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E+++ P +++ + + W+ M+ L+ + +++G V ADY++
Sbjct: 62 TEEMLYMKKPFKLEPFVKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKII--NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + E N + +++ S KI+ + DN ++G ++ ++ +D + + N+A
Sbjct: 122 TQLLKLEQNFIKKPSVLEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQA 181
Query: 188 FSRISSEIIDWTLSSL 203
R ++ D+ +S +
Sbjct: 182 TFRFTATATDFVVSHI 197
>gi|312115048|ref|YP_004012644.1| hypothetical protein Rvan_2321 [Rhodomicrobium vannielii ATCC
17100]
gi|311220177|gb|ADP71545.1| protein of unknown function DUF330 [Rhodomicrobium vannielii ATCC
17100]
Length = 198
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 90/199 (45%), Gaps = 4/199 (2%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE 65
++++K + +L ++ + P +DL + R IQ+ + P+
Sbjct: 1 MRLMRKIAAIVAAGMLGGCAVGGLVGESAPA-TFDLEAPQ-VERMRARGIQITVYPPVAV 58
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
K +++ +I+V+ + Y G+ W D+LP + Q +L+ N+G V+ + D
Sbjct: 59 KTIDTVEILVKGGNGRVAYFSGAAWGDRLPALFQARLVETLANSGAFRAVLTNQDRVTGD 118
Query: 126 YQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
+ IR F+++ A++ + +K+++ +S++ K FH + I +
Sbjct: 119 LSLAIEIRDFQVDATSGAPEAVVDVYVKLVDERTSSIITTKRFHARVAAAAPDPNAGIHA 178
Query: 184 LNRAFSRISSEIIDWTLSS 202
LN AF ++++EI W
Sbjct: 179 LNIAFQQVAAEITTWVARR 197
>gi|319956953|ref|YP_004168216.1| hypothetical protein Nitsa_1214 [Nitratifractor salsuginis DSM
16511]
gi|319419357|gb|ADV46467.1| protein of unknown function DUF330 [Nitratifractor salsuginis DSM
16511]
Length = 195
Score = 154 bits (390), Expect = 5e-36, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 79/190 (41%), Gaps = 4/190 (2%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
K ++S +A L L C +++Y L + R + + P +
Sbjct: 2 KNLLSLLIAGALFFLLGGCS--GKTIHMYTLDAAGNLPRVHPRFSAIRVDYPKGIEDTMG 59
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
I S + Y SQWS L R++ LI + +G V+ A Y++
Sbjct: 60 TRIYFSRSDLTQSYYGYSQWSKSLNRILMANLIEALQRSGIARNVLDYASQADAPYELEC 119
Query: 131 AIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ FE I A I++ L++I D L+ K+F+ + + F+++ NRA
Sbjct: 120 TVYRFEHQITPQGSTAEISIGLRLIRTEDKKLIASKIFNYSIPCTQTDARGFVEAANRAI 179
Query: 189 SRISSEIIDW 198
R+S+++I W
Sbjct: 180 FRLSTDMIRW 189
>gi|54294943|ref|YP_127358.1| hypothetical protein lpl2022 [Legionella pneumophila str. Lens]
gi|53754775|emb|CAH16262.1| hypothetical protein lpl2022 [Legionella pneumophila str. Lens]
Length = 200
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 90/196 (45%), Gaps = 4/196 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+++S +L +L SC PV N Y LT STK R I + +T P
Sbjct: 2 RVLSSVCFILGILTLMSCSPVKVPVTNEYQLTAYSTKQLTRKPRPITIQVTVPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E+++ P +++ + + W+ M+ L+ + +++G V ADY++
Sbjct: 62 TEEMLYMKKPFKLEPFVKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKII--NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + E N + +I+ S KI+ + DN ++G ++ ++ +D + + N+A
Sbjct: 122 TQVLKLEQNFIKKPSILEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQA 181
Query: 188 FSRISSEIIDWTLSSL 203
R ++ D+ +S +
Sbjct: 182 TFRFTATATDFVVSHI 197
>gi|238754550|ref|ZP_04615904.1| hypothetical protein yruck0001_4180 [Yersinia ruckeri ATCC 29473]
gi|238707181|gb|EEP99544.1| hypothetical protein yruck0001_4180 [Yersinia ruckeri ATCC 29473]
Length = 145
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 31/143 (21%), Positives = 68/143 (47%), Gaps = 2/143 (1%)
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
+ +NS I V+ EI S+WSD P +++ +LI F +G++ V + +
Sbjct: 2 ANQFINSTRIAVQPQGQEIAVYKASRWSDATPILVRNRLIQEFRADGRVRAVSSDDDSLQ 61
Query: 124 ADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
AD ++ + +F+ N D I +++ D ++ + F + + ++ + +
Sbjct: 62 ADVELSGDLSAFQGVYNSDGSIVRIRFDARLVRVSDRRIIATRQFDIHQPIKGTDMNDVV 121
Query: 182 QSLNRAFSRISSEIIDWTLSSLP 204
Q+ A R++++++ WTL P
Sbjct: 122 QAFGAAGDRLAAQVLKWTLQQAP 144
>gi|163744192|ref|ZP_02151552.1| hypothetical protein OIHEL45_01375 [Oceanibulbus indolifex HEL-45]
gi|161381010|gb|EDQ05419.1| hypothetical protein OIHEL45_01375 [Oceanibulbus indolifex HEL-45]
Length = 206
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 45/204 (22%), Positives = 89/204 (43%), Gaps = 3/204 (1%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M N + + ++ C++LS+ PV+ YDL + + + +L+I
Sbjct: 1 MMPPANLTRRIAFLGAIASLSGCSALSALNTAAQPVDTYDLRPAPGSQKGPRSAAKLLIA 60
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P L S+ I+VRS I YL ++W D+ P ++Q L+ + +G+I V
Sbjct: 61 RPEASAALASDRIMVRSDGATITYLPDARWVDEAPIVLQGLLVRSIAASGRIGYVGPSEG 120
Query: 121 GIYADYQIISAIRSFEINIDRHCAI---ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNK 177
G D ++ + SFE+ I+ + + ++L ++N D ++G + F + D+
Sbjct: 121 GPVPDKALLVRMDSFEVTIEPGGTVLVMVDLALTVLNDSDQRVLGIRNFAQSAQAGNDSP 180
Query: 178 LHFIQSLNRAFSRISSEIIDWTLS 201
+ + + + DW L
Sbjct: 181 SAIAAAFQASLDVLLPDAADWVLR 204
>gi|114764124|ref|ZP_01443363.1| hypothetical protein 1100011001333_R2601_15737 [Pelagibaca
bermudensis HTCC2601]
gi|114543482|gb|EAU46497.1| hypothetical protein R2601_15737 [Roseovarius sp. HTCC2601]
Length = 201
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 4/199 (2%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
+++ I + A+ C +L++ + P+ +Y+L +R +++I+ EP+
Sbjct: 1 MLRLIPILFAAALTGCGALTALEEASTPLEVYELRTPEVAQSGARRGVEVIVEEPLASGS 60
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
L +E I++R SP++ QYL G +W+D P M+Q L+ + G + +V + G ADY
Sbjct: 61 LATERIMIRPSPLQAQYLPGVRWADPAPAMLQTMLVRSLSETGGLGSVSRRPVGPRADYA 120
Query: 128 IISAIRSFEIN----IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
++ + F+ + + L+++ D +V + F E + + +
Sbjct: 121 VLGELTDFQGEAIEGAESGLVRVRFVLRVVREGDARVVATRSFEATELAAATDPDSIVAA 180
Query: 184 LNRAFSRISSEIIDWTLSS 202
+ A SR+ E + W +S
Sbjct: 181 FDSATSRLLPEAVAWIVSQ 199
>gi|154252957|ref|YP_001413781.1| ABC transporter auxiliary component-like protein [Parvibaculum
lavamentivorans DS-1]
gi|154156907|gb|ABS64124.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Parvibaculum lavamentivorans DS-1]
Length = 228
Score = 147 bits (372), Expect = 6e-34, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 10/211 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ--RHIQLI 58
M + K+ + + LA L +L+ P ++Y LT T + QL
Sbjct: 6 MKTAIAKLTRLAALVLVLAPLGACALADVASGPAP-SLYVLTAPTPALPGTAMAANTQLS 64
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
+ E +++ I+ + SP EI+Y G++WSD+ PRMI L+ N G+ ++ P
Sbjct: 65 VREFQAPSAIDTGRIVFQPSPNEIKYYAGARWSDRAPRMIASLLVETLTNTGRFPAILGP 124
Query: 119 NQGIYADYQIISAIRSFEINIDRHC-------AIITMSLKIINAHDNSLVGQKVFHVEEK 171
D + IR+F D + ++++ A ++ + F E
Sbjct: 125 ETQARTDLALTGDIRAFSAFRDGAGLGEGATKVRVAFFVRLVRARGGVVLAGREFTAEAA 184
Query: 172 LEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+ + N A S+I WTL
Sbjct: 185 SASGRMDDIVAAYNAALDTALSDITAWTLEQ 215
>gi|148359618|ref|YP_001250825.1| transport protein [Legionella pneumophila str. Corby]
gi|296107660|ref|YP_003619361.1| ABC-type uncharacterized transport system, auxiliary component
[Legionella pneumophila 2300/99 Alcoy]
gi|148281391|gb|ABQ55479.1| transport system, auxiliary component [Legionella pneumophila str.
Corby]
gi|295649562|gb|ADG25409.1| ABC-type uncharacterized transport system, auxiliary component
[Legionella pneumophila 2300/99 Alcoy]
Length = 184
Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 4/180 (2%)
Query: 28 SCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
SC PV N Y LT STK R I + +T P +E+++ P +++
Sbjct: 2 SCSPVKVPVTNEYQLTAYSTKQLTRKPRPITIQVTVPEAVAGYQTEEMLYMKKPFKLEPF 61
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI 145
+ + W+ M+ L+ + +++G V ADY++ + + E N + ++
Sbjct: 62 VKNAWTSPPADMLFPLLVQSLQSSGYFYAVTSSPYSEEADYRLDTQLLKLEQNFIKKPSV 121
Query: 146 ITMSLKII--NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ S KI+ + DN ++G ++ ++ +D + + N+A R ++ D+ +S +
Sbjct: 122 LEFSAKIVLTHISDNQIIGSRIVSLQIPCSQDTPYGGVIAANQATFRFTATATDFVVSHI 181
>gi|292490600|ref|YP_003526039.1| hypothetical protein Nhal_0466 [Nitrosococcus halophilus Nc4]
gi|291579195|gb|ADE13652.1| protein of unknown function DUF330 [Nitrosococcus halophilus Nc4]
Length = 208
Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 79/199 (39%), Gaps = 6/199 (3%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNN---PVNIYDLTES-TKYDESVQRHIQLIITEPITE 65
++++ L +++ LSSC PV Y L + + L+++ P
Sbjct: 6 RRQLPYRGLCLIMVVILSSCTLSPKQPGPVRTYLLAPQLPPQTTAAPTPLTLLVSTPQAA 65
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
+ I P E+ Y +QW D RM++ L+ E +G ++ + I A+
Sbjct: 66 AGYGTSQIAYTRKPYELDYFSRNQWVDTPERMLKPILVNALEASGHFQSIAPDDTRILAE 125
Query: 126 YQIISAIRSFEINIDRHCAI--ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
++ + I + + + + ++I+ + + F E ++ + +
Sbjct: 126 LRLDTEILRLVQDFSGQPSQSHLVLRARLIDLAKGEEIASQTFEAREPAPEEGPYGGVIA 185
Query: 184 LNRAFSRISSEIIDWTLSS 202
LNRA RI E++ + +
Sbjct: 186 LNRALERILRELVTFCARA 204
>gi|84516865|ref|ZP_01004223.1| hypothetical protein SKA53_06797 [Loktanella vestfoldensis SKA53]
gi|84509333|gb|EAQ05792.1| hypothetical protein SKA53_06797 [Loktanella vestfoldensis SKA53]
Length = 189
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 81/186 (43%), Gaps = 3/186 (1%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
+A+ C+++S+ ++ YDL + Q L++ P ++++ I+VR
Sbjct: 1 MALGGCSAVSALNAAGTALDTYDLIPPSGGTTGRQTRRTLLVALPDATAAISTDRILVRP 60
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
I YL +W+ +LPR++Q L+ G+I V G D +++ + +F++
Sbjct: 61 DAAAITYLPDGRWTSELPRVVQSLLVRAISGTGRIGYVGPAEGGPVPDSALLTRVDAFDV 120
Query: 138 NID---RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
I A I ++L ++N D ++G + F + D+ + +
Sbjct: 121 TIGADRMPVAAIDITLTVLNDRDQRVIGSRRFSQSVPVAGDSPAAIVAGFQALVDALLPA 180
Query: 195 IIDWTL 200
+ DW L
Sbjct: 181 MADWVL 186
>gi|119385045|ref|YP_916101.1| hypothetical protein Pden_2314 [Paracoccus denitrificans PD1222]
gi|119374812|gb|ABL70405.1| conserved hypothetical protein [Paracoccus denitrificans PD1222]
Length = 208
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 5/186 (2%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI--QLIITEPITEKILNSEDIIVRSSP 79
C +L + + ++++L + S R +L+I P L+++ I+VR +
Sbjct: 16 GCAALRALEGEPD-RDVFELRPPSDVPRSCGRGRLAELVIEPPKARGTLDTDRIMVRPNE 74
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI 139
++ QYL ++W D +P +Q L+ F + V + G DY +IS + F +
Sbjct: 75 LQTQYLPDARWGDTVPVTLQTLLVRGFGVYDAFTHVGRAPLGTAGDYALISEVNDFNAEV 134
Query: 140 DRHCAIITM--SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
AII + +++ D +V + F + I + + A ++ +++ D
Sbjct: 135 AGQGAIIKLTVDAQMVREMDARVVSRGHFTATAQAPTTKTADLIPAFDAAGQQLVAQMTD 194
Query: 198 WTLSSL 203
W L ++
Sbjct: 195 WGLRAV 200
>gi|254496225|ref|ZP_05109119.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
gi|254354530|gb|EET13171.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
Length = 201
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 88/196 (44%), Gaps = 7/196 (3%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
K I S++ L +L +C PV N Y LTE S+K RHI L +T P
Sbjct: 5 KGIGVSMSAL---TLIACSPVKIPVTNQYQLTEYSSKQLAKHPRHIALWVTAPEAVAGYQ 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+E ++ + P + + + W++ M+ ++ + + G V+ ADY++
Sbjct: 62 TEQMLYVNKPFQRAPFVKNAWTNPPGDMLYPLMVQSLQRTGFFYAVMSSVYSQGADYRLD 121
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + S E N + ++I S K++ DN ++ K+ + + + + N+A
Sbjct: 122 TQLLSLEQNFLKKPSVIEFSAKVVLTKVADNKVIASKIISQQIPCPAETPYGGVVAANKA 181
Query: 188 FSRISSEIIDWTLSSL 203
+ ++ + D+ +S +
Sbjct: 182 TRQFTAIMSDFVVSHI 197
>gi|146277756|ref|YP_001167915.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Rhodobacter sphaeroides ATCC 17025]
gi|145555997|gb|ABP70610.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Rhodobacter sphaeroides ATCC 17025]
Length = 201
Score = 145 bits (367), Expect = 2e-33, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 85/201 (42%), Gaps = 5/201 (2%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
+ + + ++ +L + C +++S + ++ Y L+ RH +++
Sbjct: 1 MRALTRSTLLVATLMLAGCGAVTSLSRASEQLDTYTLSPLPGPGGGGARH--VVVEPVTA 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
L+++ I+++ S ++ QYL ++WSD P ++Q L+ + +N G V + G+
Sbjct: 59 GGALSTDRILIKPSRVQAQYLPDARWSDPAPALVQTLLVGSLQNAGGFRLVAREAAGLIP 118
Query: 125 DYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY +++ +R F+ + M L +I D S+ + D +
Sbjct: 119 DYTLMTELRDFQAEAPPGATPVVRVAMVLTLIRESDRSVASSRRVEAVAPAASDTTGDVV 178
Query: 182 QSLNRAFSRISSEIIDWTLSS 202
+ A ++ + I W +
Sbjct: 179 VAFEAAVTQALGQAIGWARAQ 199
>gi|221639254|ref|YP_002525516.1| hypothetical protein RSKD131_1155 [Rhodobacter sphaeroides KD131]
gi|221160035|gb|ACM01015.1| Hypothetical Protein RSKD131_1155 [Rhodobacter sphaeroides KD131]
Length = 195
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 36/184 (19%), Positives = 80/184 (43%), Gaps = 5/184 (2%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE 81
C ++SS + ++ Y L+ RH +++ L ++ I+V+ S ++
Sbjct: 12 GCGAVSSLSRASEQLDTYTLSPLPGTGGGGSRH--IVVEAATAGGALATDRILVKPSRVQ 69
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
YL ++WSD P ++Q L+ + +N G V + G+ DY +++ +R F+ +
Sbjct: 70 ALYLPDARWSDPAPALLQTLLVGSLQNGGGFRLVAREAAGLVPDYTLMTELRDFQAEVPP 129
Query: 142 ---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
++M L +I D S+ + + D+ + + + A ++ E + W
Sbjct: 130 GQTPTVHVSMVLTLIRESDRSVASTRRIEAQAPAASDSTGDVVVAFDTAVTQALGEAVAW 189
Query: 199 TLSS 202
+
Sbjct: 190 ARAQ 193
>gi|77463399|ref|YP_352903.1| hypothetical protein RSP_2812 [Rhodobacter sphaeroides 2.4.1]
gi|77387817|gb|ABA79002.1| conserved hypothetical protein [Rhodobacter sphaeroides 2.4.1]
Length = 201
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE 81
C ++SS + ++ Y L+ RH +++ L ++ I+++ S ++
Sbjct: 18 GCGAVSSLSRASEQLDTYTLSPLPGTGGGGSRH--IVVEAATAGGALATDRILIKPSRVQ 75
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
YL ++WSD P ++Q L+ + +N G V + G+ DY +++ +R F+ +
Sbjct: 76 ALYLPDARWSDPAPALVQTLLVGSLQNGGGFRLVAREAAGLVPDYTLMTELREFQAEVPP 135
Query: 142 HCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
A I+M L +I D S+ + + D+ + + + A ++ E + W
Sbjct: 136 GQAPIVRISMVLTLIRESDRSVASTRRIETQAPAASDSTGDVVVAFDTAVTQALGEAVGW 195
Query: 199 TLSS 202
+
Sbjct: 196 ARAQ 199
>gi|126462254|ref|YP_001043368.1| hypothetical protein Rsph17029_1486 [Rhodobacter sphaeroides ATCC
17029]
gi|126103918|gb|ABN76596.1| conserved hypothetical protein [Rhodobacter sphaeroides ATCC 17029]
Length = 201
Score = 143 bits (362), Expect = 9e-33, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 81/184 (44%), Gaps = 5/184 (2%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE 81
C ++SS + ++ Y L+ RH +++ L ++ I+++ S ++
Sbjct: 18 GCGAVSSLSRASEQLDTYTLSPLPGTGGGGSRH--IVVEAATAGGALATDRILIKPSRVQ 75
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
YL ++WSD P ++Q L+ + +N G V + G+ DY +++ +R F+ +
Sbjct: 76 ALYLPDARWSDPAPALVQTLLVGSLQNGGGFRLVAREAAGLVPDYTLMTELREFQAEVPP 135
Query: 142 HCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
A I+M L +I D S+ + + D+ + + + A ++ E + W
Sbjct: 136 GQAPVVRISMVLTLIRESDRSVASTRRIETQAPAASDSTGDVVVAFDTAVTQALGEAVGW 195
Query: 199 TLSS 202
+
Sbjct: 196 ARAQ 199
>gi|302039180|ref|YP_003799502.1| putative ABC transporter auxiliary component [Candidatus Nitrospira
defluvii]
gi|300607244|emb|CBK43577.1| putative ABC-type transport system, auxiliary component [Candidatus
Nitrospira defluvii]
Length = 215
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 45/210 (21%), Positives = 87/210 (41%), Gaps = 11/210 (5%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFF---HNNPVNIYDLTESTKYDESVQRHIQ------LI 58
++ ++ I AV++ +L++C NPV+ + LT + R Q L+
Sbjct: 1 MVSRRAIPWVGAVMMSCALAACVLPRSAENPVHTFLLTIDESAWRAGARAGQPEVHGVLV 60
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
+ P E + P E+ Y + W D RM+ L+ + E G VV
Sbjct: 61 VGLPQAEAGFEQPRMAYLQRPYEVSYYATNVWVDAPARMLAPLLVRSLEATGLWRVVVSM 120
Query: 119 NQGIYADYQIISAIRSFEINIDRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKLEKDN 176
+ DY++ ++ + + + + L+ ++ D ++G + F V E D+
Sbjct: 121 PTVVRGDYRLDTSGLVLQQEFLQQPSRTRLHLRAQLLEMKDQRVLGVRSFEVLEPASSDD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDWTLSSLPLS 206
+Q+ NRA +R+ + DW S L +
Sbjct: 181 AYGGVQAANRAVTRVLEALNDWIASCLRAA 210
>gi|170743044|ref|YP_001771699.1| hypothetical protein M446_4936 [Methylobacterium sp. 4-46]
gi|168197318|gb|ACA19265.1| protein of unknown function DUF330 [Methylobacterium sp. 4-46]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 27 SSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLI 86
C +DLT + LI+ EP+ + ++ IIVR + +L
Sbjct: 24 GGCG--GTVPTTFDLTALPGAARAGSARRSLIVAEPVGLQPFEADRIIVREPGGSLSFLG 81
Query: 87 GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAII 146
G QW D+LPR+IQ +LI + EN + V +P I AD +++ IR+F+I A++
Sbjct: 82 GGQWVDRLPRLIQARLIQSLENARSLRAVSRPGDKIAADTLLVTEIRAFDIAAGSREAVV 141
Query: 147 TMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
+S K+++ S+V +VF + + L+RA S + ++++ W
Sbjct: 142 DLSAKLVSEATGSVVAARVFAARVPVADLSPGASANGLDRALSLVLADVVRWV 194
>gi|218678849|ref|ZP_03526746.1| putative ABC transporter protein [Rhizobium etli CIAT 894]
Length = 173
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 55/140 (39%), Positives = 82/140 (58%), Gaps = 5/140 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
IK +++ L L+ LS C + YDL+ + D + Q++I P + L
Sbjct: 13 IKGTVVALPLIALI---LSGCGTSAK-NDTYDLSAAVDGDGPAAKSRQILIAGPTALRAL 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+SE I++R S EIQYL +QW DKLPRM+Q KL+ FEN+GK+ V P QG+ DYQ+
Sbjct: 69 DSEQIVIRVSSSEIQYLSRAQWGDKLPRMVQSKLVEAFENSGKLGGVGMPGQGLAIDYQV 128
Query: 129 ISAIRSFEINI-DRHCAIIT 147
++ IRSFEI+ + A++
Sbjct: 129 VTDIRSFEIDASSGNQAVVE 148
>gi|220924822|ref|YP_002500124.1| hypothetical protein Mnod_4964 [Methylobacterium nodulans ORS 2060]
gi|219949429|gb|ACL59821.1| protein of unknown function DUF330 [Methylobacterium nodulans ORS
2060]
Length = 200
Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 85/164 (51%)
Query: 36 VNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLP 95
+DLT + L++ EP+ + ++ IIVR + +L G QW+D+LP
Sbjct: 33 PTTFDLTAVPGAARAGAARRSLVVAEPVGLQPFEADRIIVREPGGSLSFLGGGQWADRLP 92
Query: 96 RMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINA 155
R++Q +LI + EN ++ +V +P I AD +++ IR+F+I A++ +S K+I+
Sbjct: 93 RLVQARLIQSLENANRLRSVSRPGDKIAADTLLVTEIRAFDIAAGTREAVVDLSAKLISD 152
Query: 156 HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
++V +VF ++ L+RA S + ++++ W
Sbjct: 153 ATGAVVAARVFEARVPVQDVTPASAANGLDRALSIVLADVVRWI 196
>gi|218886597|ref|YP_002435918.1| ABC transporter [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|218757551|gb|ACL08450.1| protein of unknown function DUF330 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 247
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 79/179 (44%), Gaps = 6/179 (3%)
Query: 31 FHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVR---SSPIEIQYLIG 87
P ++ H+QL I+ P T ++L+++ I++ + E++Y G
Sbjct: 64 PGPAPTHLLLAPAMPGPGAGGAVHLQLAISLPETSRMLDTDRIVLVLGGENGREVRYYAG 123
Query: 88 SQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA--- 144
++W+ PR++Q L+ FE G++ + + GIY DY++++ +R F + A
Sbjct: 124 AKWTSPAPRLVQRLLVEAFERAGRLDGAAEESAGIYPDYRLMTDLRRFNTRMGEGAAPLV 183
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ ++L+++N +V + ++ A + + W+L ++
Sbjct: 184 EVELALRLVNLKTGRIVAFTSIGRDCPAAGSALPQVAEAFETAMGDVLARATAWSLEAM 242
>gi|296445999|ref|ZP_06887949.1| protein of unknown function DUF330 [Methylosinus trichosporium
OB3b]
gi|296256517|gb|EFH03594.1| protein of unknown function DUF330 [Methylosinus trichosporium
OB3b]
Length = 191
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 87/166 (52%), Gaps = 3/166 (1%)
Query: 39 YDLTESTKYD-ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRM 97
+DL+ + + L + EP + ++S+ I++R+ P + +L +QW D+LPR+
Sbjct: 28 FDLSSALGEGVAARPLRRTLAVAEPHAIQPVDSDRIVIRTGPNGLAHLAEAQWVDRLPRL 87
Query: 98 IQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHD 157
+Q +LIA F+ K VV+P Q A+ + + IR FEI++ A++ ++ +I++
Sbjct: 88 VQARLIAAFDRGRKTGFVVRPGQ--AAERILSTDIRRFEIDVSSGEAVVEIAAEILDLRG 145
Query: 158 NSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ ++F E E + +L+ A + + +I+ WT + +
Sbjct: 146 AATGPGRIFSAEAPAEHSTGPAAVHALDEALTSVLRQIVRWTAAQV 191
>gi|217978937|ref|YP_002363084.1| protein of unknown function DUF330 [Methylocella silvestris BL2]
gi|217504313|gb|ACK51722.1| protein of unknown function DUF330 [Methylocella silvestris BL2]
Length = 207
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 54/204 (26%), Positives = 96/204 (47%), Gaps = 6/204 (2%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLII 59
+ + +++ + + L++C + P +DL T + R Q+ I
Sbjct: 9 LRQTASRLAALRPGRLMIVFASAGILAAC--ASAPPATFDLDAAPTGFSAKQARRAQIAI 66
Query: 60 TEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
P ++S I+VR +I L G+ WS++LP ++Q KLIA+F+N I VV P
Sbjct: 67 AAPSALPPVDSNRIVVRVGEDQIALLAGAAWSNQLPALLQAKLIASFQNASLIRAVVSP- 125
Query: 120 QGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
G+ ADY++ S IRSFE R + +S +I+ +V K+F ++
Sbjct: 126 -GMPADYELRSQIRSFEYVAGRGAVFVEISAQIVGGA-GRIVAGKIFSATAPAPANDGAT 183
Query: 180 FIQSLNRAFSRISSEIIDWTLSSL 203
+ +LN A + + +I+ WT +
Sbjct: 184 VVAALNAATADVMRQIVRWTAPQI 207
>gi|270159821|ref|ZP_06188477.1| putative lipoprotein [Legionella longbeachae D-4968]
gi|289165421|ref|YP_003455559.1| hypothetical protein LLO_2088 [Legionella longbeachae NSW150]
gi|269988160|gb|EEZ94415.1| putative lipoprotein [Legionella longbeachae D-4968]
gi|288858594|emb|CBJ12475.1| Conserved hypothetical protein [Legionella longbeachae NSW150]
Length = 199
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 80/192 (41%), Gaps = 4/192 (2%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPV-NIYDLTE-STKYDESVQRHIQLIITEPITEKILNSE 71
++ L L LS+C V + Y L+ S K I L++T P +E
Sbjct: 4 LAVCLLGLSAVILSACSPVRISVKDQYQLSAFSAKQLAKKPMPITLLVTAPDAAGGYQTE 63
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
++ P E++ + W + M+ ++ + + V + ADY++ S
Sbjct: 64 QMLYIKRPYELEAFAKNAWVNPPADMLYPLILQSLQKTNLFEAVTSNAYALGADYRLDSQ 123
Query: 132 IRSFEINIDRHCAIITMSLKII--NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ N + ++I S+KI+ + DN ++G ++ ++ D + + N+A
Sbjct: 124 LLYLNQNFLKKPSVIEFSVKIVLTHVSDNKILGSRIINLSVPCPSDTPYGGVIAANKATQ 183
Query: 190 RISSEIIDWTLS 201
++E+ + +S
Sbjct: 184 IFTAELAHFVVS 195
>gi|163850327|ref|YP_001638370.1| hypothetical protein Mext_0894 [Methylobacterium extorquens PA1]
gi|163661932|gb|ABY29299.1| protein of unknown function DUF330 [Methylobacterium extorquens
PA1]
Length = 207
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 91/164 (55%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
+DL + ++++EP+ + + ++ IIVR + +L G QW+D+LPR+I
Sbjct: 43 FDLAALPGQARAGGAARSIVVSEPVGLQPMEADRIIVREPGGSLSFLGGGQWADRLPRLI 102
Query: 99 QLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDN 158
Q ++I + EN G++ +V +P+ + +DYQ++S IR F++N A++ +S K+I
Sbjct: 103 QTRVIQSLENTGRLRSVSRPSDKVPSDYQLVSEIREFDVNSGTGEAVVDLSAKLIAEGTG 162
Query: 159 SLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+V +VF ++K + L+ A ++ ++++ W ++
Sbjct: 163 RVVNARVFTARVPVKKVDPQSAAAGLDAALGQVLADLVRWVNTA 206
>gi|188580088|ref|YP_001923533.1| hypothetical protein Mpop_0820 [Methylobacterium populi BJ001]
gi|179343586|gb|ACB78998.1| protein of unknown function DUF330 [Methylobacterium populi BJ001]
Length = 207
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 47/196 (23%), Positives = 99/196 (50%), Gaps = 1/196 (0%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE 65
+++ + + + L C P+ +DL + ++++EP+
Sbjct: 11 GRLLSGRFLRAGALLAPLALLGGCGGGATPL-TFDLAALPGQARAGGAARSIVVSEPVGL 69
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
+ + ++ IIVR + +L G QW+D+LPR+IQ ++I + EN G++ +V +P + +D
Sbjct: 70 QPMEADRIIVREPGGSLSFLGGGQWADRLPRLIQTRVIQSLENTGRLRSVSRPTDKVPSD 129
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
YQ++S IR F+IN A++ +S K+I +V +VF ++K + L+
Sbjct: 130 YQLVSEIREFDINSGTGEAVVDLSAKLIAEGSGRVVNARVFTARVPVQKVDPQSAAAGLD 189
Query: 186 RAFSRISSEIIDWTLS 201
A ++ ++++ W +
Sbjct: 190 AALGQVLADLVRWVNT 205
>gi|218528884|ref|YP_002419700.1| hypothetical protein Mchl_0854 [Methylobacterium chloromethanicum
CM4]
gi|240137398|ref|YP_002961869.1| putative uncharacterized ABC-transporter auxiliary component
[Methylobacterium extorquens AM1]
gi|218521187|gb|ACK81772.1| protein of unknown function DUF330 [Methylobacterium
chloromethanicum CM4]
gi|240007366|gb|ACS38592.1| putative uncharacterized ABC-transporter auxiliary component
[Methylobacterium extorquens AM1]
Length = 207
Score = 138 bits (349), Expect = 3e-31, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 91/164 (55%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
+DL + ++++EP+ + + ++ IIVR + +L G QW+D+LPR+I
Sbjct: 43 FDLAALPGQARAGGAARSIVVSEPVGLQPMEADRIIVREPGGSLSFLGGGQWADRLPRLI 102
Query: 99 QLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDN 158
Q ++I + EN G++ +V +P+ + +DYQ++S IR F++N A++ +S K+I
Sbjct: 103 QTRVIQSLENTGRLRSVSRPSDKVPSDYQLVSEIREFDVNSGTGEAVVDLSAKLIAEGTG 162
Query: 159 SLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+V +VF ++K + L+ A ++ ++++ W ++
Sbjct: 163 RVVNARVFTARVPVKKVDPQSAAAGLDAALGQVLADLVRWVNTA 206
>gi|254559578|ref|YP_003066673.1| ABC transporter auxiliary protein [Methylobacterium extorquens DM4]
gi|254266856|emb|CAX22655.1| putative uncharacterized ABC-transporter auxiliary component
[Methylobacterium extorquens DM4]
Length = 207
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 91/164 (55%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
+DL + ++++EP+ + + ++ IIVR + +L G QW+D+LPR+I
Sbjct: 43 FDLAALPGQARAGGAARSIVVSEPVGLQPMEADRIIVREPGGSLSFLGGGQWADRLPRLI 102
Query: 99 QLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDN 158
Q ++I + EN G++ +V +P+ + +DYQ++S IR F++N A++ +S K+I
Sbjct: 103 QTRVIQSLENTGRLRSVSRPSDKVPSDYQLVSEIREFDVNSGTGEAVVDLSAKLIGEGTG 162
Query: 159 SLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+V +VF ++K + L+ A ++ ++++ W ++
Sbjct: 163 RVVNARVFTARVPVKKVDPQSAAAGLDAALGQVLADLVRWVNTA 206
>gi|121998621|ref|YP_001003408.1| putative ABC transporter [Halorhodospira halophila SL1]
gi|121590026|gb|ABM62606.1| putative ABC-type uncharacterized transport system [Halorhodospira
halophila SL1]
Length = 208
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 74/183 (40%), Gaps = 5/183 (2%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESV---QRHIQLIITEPITEKILNSEDIIVRSSPIE 81
S + Y L + L +T P + +L I V +
Sbjct: 22 SACTLLPEAETYTAYQLPPPEGDAPAADTEPVDWTLRVTTPSSSDLLAGNRIAVATGEHR 81
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI-- 139
+ G++W LPR+ Q LI F +G+I + + + AD ++ + +R+F+I
Sbjct: 82 MSTFAGARWVSPLPRLWQEHLIETFYADGRIHRLSADGERLSADLELRTTLRAFQIETRD 141
Query: 140 DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
+ A + + ++++ +V + F + D+ + +L A + E++ WT
Sbjct: 142 EGPRARVVVDARLVDVGQRRIVATERFAATRDVASDDTDAAVAALGAANRSVGRELVAWT 201
Query: 200 LSS 202
+++
Sbjct: 202 VTA 204
>gi|82702736|ref|YP_412302.1| hypothetical protein Nmul_A1609 [Nitrosospira multiformis ATCC
25196]
gi|82410801|gb|ABB74910.1| conserved hypothetical protein [Nitrosospira multiformis ATCC
25196]
Length = 220
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 75/189 (39%), Gaps = 5/189 (2%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDE--SVQRHIQLIITEPITEKILNSEDIIVR 76
A+LL S S + IY L + L + P + I +S ++
Sbjct: 22 AMLLLVSSCSILPATENLEIYQLPAAEFAPRSSGSPLPWTLRLATPHSNYITDSPRVLAL 81
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII-SAIRSF 135
++ G +WSD +P +++ +L F +G+ ++++ N + + +F
Sbjct: 82 RQGSQLSSYKGIRWSDPVPVLLRNRLAGAFRADGRFNSIINGNNNNLIANLELGGDLSAF 141
Query: 136 EINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
++ D A I + N +V + F V E ++ I + A R ++
Sbjct: 142 QVEYTNDGPQATIYFYATLSQPLRNRIVAVRRFEVGEPVQSRGTSGIITAFGVAADRFAA 201
Query: 194 EIIDWTLSS 202
EI+DWT+
Sbjct: 202 EIVDWTVQQ 210
>gi|115523757|ref|YP_780668.1| hypothetical protein RPE_1739 [Rhodopseudomonas palustris BisA53]
gi|115517704|gb|ABJ05688.1| Mammalian cell entry related domain protein [Rhodopseudomonas
palustris BisA53]
Length = 384
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 54/203 (26%), Positives = 96/203 (47%), Gaps = 2/203 (0%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEP 62
+ + + + V ++ IYDL T + QL I EP
Sbjct: 168 RVFAESLARNSGKLDGIVAGIERMTGADKPVVNKVIYDLATPTDFTPGKPIRGQLAIAEP 227
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
+L+++ I+ ++ L G QWSD +P+M+Q KLI +FEN +K N +
Sbjct: 228 SAVVMLDTQRILTAP-GLDFPQLAGVQWSDSIPKMLQAKLIQSFENYDIAHAPIKANDMV 286
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
AD+Q+ + FEI D A I ++ K+++ D ++ K+F V L+K L +
Sbjct: 287 SADHQLAIDLHGFEIAGDPPQAAIALAAKLLD-KDGKVMTAKLFRVNRPLDKVEPLAALA 345
Query: 183 SLNRAFSRISSEIIDWTLSSLPL 205
+ N AFS ++ +++ WT+++L
Sbjct: 346 AFNAAFSELAKDLVGWTVAALDA 368
>gi|302353422|gb|ADL27917.1| putative ABC transporter protein [Candidatus Liberibacter
asiaticus]
Length = 112
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 112/112 (100%), Positives = 112/112 (100%)
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAH 156
MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAH
Sbjct: 1 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAH 60
Query: 157 DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPLSDN 208
DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPLSDN
Sbjct: 61 DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPLSDN 112
>gi|27381174|ref|NP_772703.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
USDA 110]
gi|30179810|sp|P29285|Y6063_BRAJA RecName: Full=Uncharacterized protein bll6063
gi|27354341|dbj|BAC51328.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum
USDA 110]
Length = 367
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 86/203 (42%), Gaps = 5/203 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKY-DESVQRHIQLIITE 61
K + + + + ++ + YDL + L I E
Sbjct: 168 KTFSDGLARNTGKLDGILAGLEKMTGGGAPAQKI-TYDLRTPQNLGPAAKTLSASLAIPE 226
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
P +L ++ ++ W+D +P+++Q +LI +FEN ++ +
Sbjct: 227 PTAVAMLQTQRMLFAPVGDN-PGFADFLWADSIPKLVQARLIDSFENYDIAHAPLRTSDL 285
Query: 122 IYADYQIISAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
ADYQ++ IR F I D I +S +I++ + +V ++ EKL+K
Sbjct: 286 GQADYQLLIDIRRFRIATDGETRVEIGLSARIVD-KNGKVVASRLVETSEKLDKVEPAAA 344
Query: 181 IQSLNRAFSRISSEIIDWTLSSL 203
+ + + AF+RI+ E+I WT+ ++
Sbjct: 345 VAAFDAAFARIAKELIGWTVLAV 367
>gi|152086|gb|AAA26208.1| ORF 180 [Bradyrhizobium japonicum]
Length = 180
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 78/168 (46%), Gaps = 4/168 (2%)
Query: 38 IYDLTESTKY-DESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
YDL + L I EP +L ++ ++ W+D +P+
Sbjct: 15 TYDLRTPQNLGPAAKTLSASLAIPEPTAVAMLQTQRMLFAPVGDN-PGFADFLWADSIPK 73
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC-AIITMSLKIINA 155
++Q +LI +FEN ++ + ADYQ++ IR F I D I +S +I++
Sbjct: 74 LVQARLIDSFENYDIAHAPLRTSDLGQADYQLLIDIRRFRIATDGETRVEIGLSARIVD- 132
Query: 156 HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ +V ++ EKL+K + + + AF+RI+ E+I WT+ ++
Sbjct: 133 KNGKVVASRLVETSEKLDKVEPAAAVAAFDAAFARIAKELIGWTVLAV 180
>gi|83858855|ref|ZP_00952377.1| hypothetical protein OA2633_05111 [Oceanicaulis alexandrii
HTCC2633]
gi|83853678|gb|EAP91530.1| hypothetical protein OA2633_05111 [Oceanicaulis alexandrii
HTCC2633]
Length = 211
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 80/191 (41%), Gaps = 7/191 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDII 74
+++++ S + PV++Y L +++ + Q L+I + L + +
Sbjct: 13 AAISLVATPGCISLLPESEPVSLYRLNALVDEEQAPSANAQTLVIERITAPRGLAVDRVA 72
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+ E+ Y+ G+ W P M+Q +++ ++ + G+ A Y++ +R
Sbjct: 73 LLREG-ELAYMAGAAWLSPAPVMVQDRILDVLQSETPELIPARTEDGVDARYRLQIELRR 131
Query: 135 FEINIDRHCAI-----ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
FE D+ + + + ++I+ + +L + F V + + + I + + A +
Sbjct: 132 FEAEYDQGPSRAPVIQMRVMARLIDREERTLAAARRFDVSVRASDNRQSALIAAFSEATN 191
Query: 190 RISSEIIDWTL 200
+ + W+
Sbjct: 192 DTARSLAQWSA 202
>gi|323136831|ref|ZP_08071912.1| protein of unknown function DUF330 [Methylocystis sp. ATCC 49242]
gi|322398148|gb|EFY00669.1| protein of unknown function DUF330 [Methylocystis sp. ATCC 49242]
Length = 213
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHI--QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQ 89
P +DL + + LI+ EP + S+ ++VR + L G Q
Sbjct: 44 AQPPRQTFDLAGAVSAARAAPLRSGPALIVREPAAVQPTGSDRVVVRDVDGSVSVLPGVQ 103
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMS 149
WS++LPR+ Q +LI + G + + + A + + IR FEI++ R A++ +
Sbjct: 104 WSERLPRLFQNRLIEAMQRAGVPAGQIS----LGATAALATDIRRFEIDVARSIAVVEIE 159
Query: 150 LKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
++++ + + ++F E + + +L A + +++ I W
Sbjct: 160 ARLVSESNGATRAAQLFTAEAPAPEHTGAPAVHALGEASATVAARIAVWA 209
>gi|295690465|ref|YP_003594158.1| hypothetical protein Cseg_3100 [Caulobacter segnis ATCC 21756]
gi|295432368|gb|ADG11540.1| protein of unknown function DUF330 [Caulobacter segnis ATCC 21756]
Length = 211
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 40/207 (19%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 11 KKIISCSLAVLLCTSLSSC---FFHNNPVNIYDLTEST-KYDESVQRHIQLIITEPITEK 66
+ I + L LS+C F PV +Y E+ + + ++ P T
Sbjct: 5 RSIARLTAVAALAIGLSACISVFPKTKPVGLYRFGEAEISATKGPPGAMFGVLKSPSTFT 64
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
+ D I+ S+ ++ Y+ ++W + + + FEN+ + ++ + AD
Sbjct: 65 RAAASDRILTSNQGQVAYIADARWVSPAFVLFEEAVARAFENDPGRARLIGRGEVAKADL 124
Query: 127 QIISAIRSFEINI-DRHCAIITMSLK----IINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
+ +R+FE + D A + ++ + D LVG +VF K + +
Sbjct: 125 VLRLEVRTFETDYVDGPKAAPEVVVRVRGVLNRNSDRVLVGDQVFEARVKAADNRVSAIV 184
Query: 182 QSLNRAFSRISSEIIDWTLSSLPLSDN 208
+ ++A +++ E++ WT ++ P N
Sbjct: 185 PAYDKAVAQVLGEVVAWTNAAGPAIAN 211
>gi|46579023|ref|YP_009831.1| putative lipoprotein [Desulfovibrio vulgaris str. Hildenborough]
gi|120603388|ref|YP_967788.1| lipoprotein [Desulfovibrio vulgaris DP4]
gi|46448436|gb|AAS95090.1| lipoprotein, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120563617|gb|ABM29361.1| lipoprotein, putative [Desulfovibrio vulgaris DP4]
gi|311232873|gb|ADP85727.1| protein of unknown function DUF330 [Desulfovibrio vulgaris RCH1]
Length = 211
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 73/198 (36%), Gaps = 9/198 (4%)
Query: 10 KKKIISCSLAVLLCTSLSSCF----FHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPI 63
+ + L S + C P I T +QL ++ P
Sbjct: 7 FTTLCAILLLAASTISGAGCARVLDPGPAPQRILLSPDMPRTDATPRPAAPVQLAVSLPE 66
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
T + L+++ I + E+ YL +W +P+M+Q +I + +I TV + G++
Sbjct: 67 TTRSLDTDHIAIL-QGRELSYLPNVRWGSHVPQMLQRHIIDALDAGTRIGTVSAESAGVF 125
Query: 124 ADYQIISAIRSFEINID--RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
D +++ I+ F + I + L++++ ++ + L D + +
Sbjct: 126 PDVRLMVDIQQFAARTEARETGVDIRLRLQMLDVRKGRIIASQNVEAYVPLADDRRATLL 185
Query: 182 QSLNRAFSRISSEIIDWT 199
A S I + W
Sbjct: 186 DGFEAALSGILEKTARWV 203
>gi|160871905|ref|ZP_02062037.1| conserved hypothetical protein [Rickettsiella grylli]
gi|159120704|gb|EDP46042.1| conserved hypothetical protein [Rickettsiella grylli]
Length = 218
Score = 118 bits (296), Expect = 4e-25, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 74/197 (37%), Gaps = 5/197 (2%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI---QLIITEPITEKIL 68
II C LA LL ++ S P Y + +++ +P +
Sbjct: 18 AIIVCFLAFLLLSACSLFEPIKIPPTHYFTLAIPDPNGDCPIQRGCRTILVNQPRVNAVY 77
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
N+ +I + +IQY ++W M+ LI ++ G ++ D+ +
Sbjct: 78 NTSRMIYIPACYQIQYFSQNRWVGTPAEMLHPLLINALQHTGYFQAIINTPSTTDYDWVL 137
Query: 129 ISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ + SF+ I + ++I+A ++ + F E D+ + N
Sbjct: 138 NTQLLSFQQEFIYFPSRFRIAIRAQLIDARSRHILATQDFVAVEIAPHDDPYGGTLAANS 197
Query: 187 AFSRISSEIIDWTLSSL 203
A +I +EI + L +L
Sbjct: 198 AIQKILNEINCFCLKNL 214
>gi|16126560|ref|NP_421124.1| hypothetical protein CC_2321 [Caulobacter crescentus CB15]
gi|221235342|ref|YP_002517779.1| membrane lipoprotein [Caulobacter crescentus NA1000]
gi|13423844|gb|AAK24292.1| hypothetical protein CC_2321 [Caulobacter crescentus CB15]
gi|220964515|gb|ACL95871.1| membrane lipoprotein [Caulobacter crescentus NA1000]
Length = 216
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 33/214 (15%), Positives = 88/214 (41%), Gaps = 9/214 (4%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSC---FFHNNPVNIYDL-TESTKYDESVQRHIQLII 59
+N+ +++ A L SLS+C F + P +Y + + + ++
Sbjct: 3 PMNRKAPRRVAKVVAATALALSLSACISVFPESEPATLYRFGQADVGVPKGPKGAVFSVL 62
Query: 60 TEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
P T ++ D ++ S+ E+ Y+ ++W + + + + F+ + + ++
Sbjct: 63 KAPTTFTRASAGDRLLTSTRGEVAYIADARWVSPAFVLFEEAVASAFQTDQGRARLIGRG 122
Query: 120 QGIYADYQIISAIRSFEINI-----DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ AD + +++FE ++ + + D +LV +VF K +
Sbjct: 123 EIAKADLVLRLEVQTFEAQYVNGPKSAPEVVVRVRGVLNRNQDRTLVSDQVFEARVKADD 182
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLPLSDN 208
+ + + ++A +++ E++ W ++ P N
Sbjct: 183 NRVSAIVPAYDQAVAQVLGEVVTWVNATGPAIQN 216
>gi|126666398|ref|ZP_01737377.1| lipoprotein, putative [Marinobacter sp. ELB17]
gi|126629199|gb|EAZ99817.1| lipoprotein, putative [Marinobacter sp. ELB17]
Length = 214
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 34/203 (16%), Positives = 77/203 (37%), Gaps = 5/203 (2%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKY--DESVQRHIQLIITEPITEKI 67
K + +L L+ T + F + D + Q+ L + P+ +
Sbjct: 5 SKNFVPATLCALVMTG-CTIFPVPETPRVMDFAPAPLTLGRAGDQQPYSLRVDTPVASEP 63
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
+NS I+ + E + G +W D P +++ + A + V+ AD
Sbjct: 64 INSTRILAKPEATEFRIYGGVRWRDTAPVIMRDAITAALRRSQGFERVITDVSPAEADLT 123
Query: 128 IISAIRSFEINIDRHCA--IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+++ + +F+ + + +I + +I+ +VF ++ + I + +
Sbjct: 124 MVTELLAFQSQPGANHSDVVIRLYSEIMENRSRRTACSQVFDIKTSAASNRLDDVIIAFD 183
Query: 186 RAFSRISSEIIDWTLSSLPLSDN 208
A R+ SE+ W + LS +
Sbjct: 184 GAGQRMVSELALWASACEGLSAD 206
>gi|304319770|ref|YP_003853413.1| lipoprotein, hypothetical [Parvularcula bermudensis HTCC2503]
gi|303298673|gb|ADM08272.1| lipoprotein, hypothetical [Parvularcula bermudensis HTCC2503]
Length = 215
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 86/155 (55%), Gaps = 4/155 (2%)
Query: 49 ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN 108
S L+I +P E +LN+ ++ V+++P + +YL GS+W+D++P + + L FEN
Sbjct: 47 TSRPIDATLVIADPDAEAVLNTFNVAVKTAPYQFEYLDGSEWTDRVPVLFRTYLERRFEN 106
Query: 109 NGKISTVV-KPNQGIYADYQIISAIRSFEIN--IDRHCAIITMSLKIINAHDNSLVGQKV 165
G ++ V + + + AD+++ + +R+F ++ + A ++ ++++A + +G ++
Sbjct: 107 VGALTAVGDRSDLPVGADFELKTDLRAFYLDRTVSPEAARLSFGARLVDAQGGT-LGTRI 165
Query: 166 FHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
+E + +++LNR S ++I W+L
Sbjct: 166 IDRTIPIEGRGREGAVEALNRVAIDASDDVISWSL 200
>gi|120554121|ref|YP_958472.1| ABC-type uncharacterized transport system auxiliary component-like
[Marinobacter aquaeolei VT8]
gi|120323970|gb|ABM18285.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Marinobacter aquaeolei VT8]
Length = 202
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 74/193 (38%), Gaps = 3/193 (1%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDE-SVQRHIQLIITEPITEKILNSED 72
+ +LA+ L + + F + +L ++ L + P+ L+S
Sbjct: 3 VLSALALGLVLAGCTVFPVPESPRLMELAPASDLPAFDQALPASLRVDTPLASDPLDSAR 62
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
I+++ S E + L G++W + +P +++ L+ F +G + V+ + ++S +
Sbjct: 63 ILIKPSAYEYRALAGARWRESIPVVVRDHLLETFRASGAFANVMTDTSPATSQLTLVSEL 122
Query: 133 RSFEINID--RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
F +I + ++++ + + + + +++ + A +
Sbjct: 123 TGFHAENGETGTRVVIRLHQQLMDNRTRRSLCVRSYEASANAQSTALGELMEAFSNASAH 182
Query: 191 ISSEIIDWTLSSL 203
S + W +
Sbjct: 183 SSVTTVTWAHQCM 195
>gi|218516886|ref|ZP_03513726.1| putative ABC transporter protein [Rhizobium etli 8C-3]
Length = 96
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 108 NNGKISTVVKPNQGIYADYQIISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVF 166
N+GK+ V P QG+ DYQ+++ IRSFEI+ + A++ +S+KI+N + S+ QKVF
Sbjct: 1 NSGKLGGVGLPGQGLAIDYQVVTDIRSFEIDASSGNQAVVEISVKILNDRNGSVRAQKVF 60
Query: 167 HVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
DN F++SL+RAFS + SEI+ WTL S+
Sbjct: 61 RATAPAGGDN-AGFVKSLDRAFSTVVSEIVSWTLRSI 96
>gi|57168791|ref|ZP_00367922.1| probable lipoprotein Cj1649 [Campylobacter coli RM2228]
gi|305432467|ref|ZP_07401629.1| probable lipoprotein [Campylobacter coli JV20]
gi|57019838|gb|EAL56521.1| probable lipoprotein Cj1649 [Campylobacter coli RM2228]
gi|304444506|gb|EFM37157.1| probable lipoprotein [Campylobacter coli JV20]
Length = 200
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 70/138 (50%), Gaps = 3/138 (2%)
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
L+S II I Y W+D + Q L++ FE + ++ + +DY
Sbjct: 61 LHSRSIIYVQKGISKAY-AYHFWADLPNNLYQSLLLSKFEQSQIFKALLSQGSSVGSDYI 119
Query: 128 IISAIRSFEINIDRHC--AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ S I SFE +D + I++S+ I+A ++ ++ ++F ++E+++K + QS
Sbjct: 120 LESRIDSFEQVVDENENYVSISISINFIDAKESKIIAHRLFSIKERVKKIDIFDVYQSFE 179
Query: 186 RAFSRISSEIIDWTLSSL 203
+A + + +EI+ W ++L
Sbjct: 180 KALNSLGNEIVLWINATL 197
>gi|197120795|ref|YP_002132746.1| ABC transporter [Anaeromyxobacter sp. K]
gi|196170644|gb|ACG71617.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Anaeromyxobacter sp. K]
Length = 220
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 62/170 (36%), Gaps = 2/170 (1%)
Query: 30 FFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQ 89
F + P + L + L++ P + I E+Q+ S+
Sbjct: 25 FGPSTPPTRFALQADFEGQPIAGPGPALVVAVPTAAAGFDGPRIAYVRRAHELQFFARSE 84
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMS 149
W D RM+ L+ E +G V A ++ S + + + + ++
Sbjct: 85 WVDAPARMLAPLLVQALERSGGFQAVAGARTPAAAGLRLESELVRLQQEFTVRPSRVRLT 144
Query: 150 LK--IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
L+ + + ++G + E+ D+ +++ NRA R+ E++
Sbjct: 145 LRVQLSDVASRRVLGTRELEAVEEARSDDPYGGVEAANRAVRRLLDEVVA 194
>gi|119945389|ref|YP_943069.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Psychromonas ingrahamii 37]
gi|119863993|gb|ABM03470.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Psychromonas ingrahamii 37]
Length = 200
Score = 101 bits (252), Expect = 5e-20, Method: Composition-based stats.
Identities = 37/192 (19%), Positives = 76/192 (39%), Gaps = 12/192 (6%)
Query: 18 LAVLLCTSLSSCFFHN-NPVNIYDLTES------TKYDESVQRHIQLIITEPITEKILNS 70
L LL ++ C PV+ Y L + K E I L++ + + N+
Sbjct: 8 LLALLLIGITGCAGKKLPPVSTYTLYPALDTFYLPKSQEGKPAGI-LMLGRMGSSHVFNA 66
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
+II S+WSD M++L E +G+ VV + +D+ + S
Sbjct: 67 REIIYSDQRYGQSSYAYSRWSDSPTIMLRLIFQEALEKSGRYIAVVPYSSQSKSDFLLES 126
Query: 131 AIRSFEINI---DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH-FIQSLNR 186
+ F + +I + +I+ + + ++ + F + + +LN+
Sbjct: 127 TLLDFSHRVNDDGTSDGLIKIHFNLIDNNTSRVIKSRNFVSSLPVAPPINAGNAVAALNK 186
Query: 187 AFSRISSEIIDW 198
A + ++ E++DW
Sbjct: 187 AATIVTKELVDW 198
>gi|153951354|ref|YP_001398926.1| putative lipoprotein [Campylobacter jejuni subsp. doylei 269.97]
gi|152938800|gb|ABS43541.1| putative lipoprotein [Campylobacter jejuni subsp. doylei 269.97]
Length = 199
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I LNS II + +Y W D + +++ FE + +T++
Sbjct: 51 LKIRNANAPLYLNSRAIIYIDNGFSNKYAHYF-WGDLPSNLYSSLILSKFEQSNIFTTLL 109
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 110 SSTSSLNADYALESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKIFNTKEKIEK 169
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EI+ W S+L
Sbjct: 170 KDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|148925788|ref|ZP_01809476.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845798|gb|EDK22889.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8486]
Length = 199
Score = 100 bits (250), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I LNS I+ + +Y W D + +++ FE + +T++
Sbjct: 51 LKIRNANAPLYLNSRAIVYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLL 109
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 110 SSTSSLSADYALESRINSFEQILNNNENYAQISVSVNFINLENNQIIAHKIFNTKEKIEK 169
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EI+ W S+L
Sbjct: 170 KDIRSIYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|86152317|ref|ZP_01070528.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 260.94]
gi|121613719|ref|YP_001001292.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81-176]
gi|167006186|ref|ZP_02271944.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81-176]
gi|315125048|ref|YP_004067052.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85840806|gb|EAQ58057.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 260.94]
gi|87249863|gb|EAQ72822.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81-176]
gi|315018770|gb|ADT66863.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 199
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I LNS I+ + +Y W D + +++ FE + +T++
Sbjct: 51 LKIRNANAPLYLNSRAIVYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLL 109
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 110 SSTSSLNADYALESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKIFNTKEKIEK 169
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EI+ W S+L
Sbjct: 170 KDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|315927600|gb|EFV06931.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 186
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I LNS I+ + +Y W D + +++ FE + +T++
Sbjct: 38 LKIRNANAPLYLNSRAIVYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLL 96
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 97 SSTSSLSADYSLESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKIFNTKEKIEK 156
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EI+ W S+L
Sbjct: 157 KDIRSTYNAFQKALNKIGNEIVFWVNSNLS 186
>gi|86152615|ref|ZP_01070820.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843500|gb|EAQ60710.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 199
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I LNS I+ + +Y W D + +++ FE + +T++
Sbjct: 51 LKIRNANAPLYLNSRAIVYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLL 109
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 110 SSTSSLSADYALESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKIFNTKEKIEK 169
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EI+ W S+L
Sbjct: 170 KDIHSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|29654064|ref|NP_819756.1| hypothetical protein CBU_0730 [Coxiella burnetii RSA 493]
gi|153209303|ref|ZP_01947338.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
gi|154706292|ref|YP_001424139.1| hypothetical protein CBUD_0745 [Coxiella burnetii Dugway 5J108-111]
gi|161830705|ref|YP_001596958.1| hypothetical protein COXBURSA331_A1220 [Coxiella burnetii RSA 331]
gi|165924014|ref|ZP_02219846.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
gi|212219045|ref|YP_002305832.1| hypothetical protein CbuK_1525 [Coxiella burnetii CbuK_Q154]
gi|29541330|gb|AAO90270.1| hypothetical protein CBU_0730 [Coxiella burnetii RSA 493]
gi|120575419|gb|EAX32043.1| conserved hypothetical protein [Coxiella burnetii 'MSU Goat Q177']
gi|154355578|gb|ABS77040.1| hypothetical protein CBUD_0745 [Coxiella burnetii Dugway 5J108-111]
gi|161762572|gb|ABX78214.1| conserved hypothetical protein [Coxiella burnetii RSA 331]
gi|165916537|gb|EDR35141.1| conserved hypothetical protein [Coxiella burnetii RSA 334]
gi|212013307|gb|ACJ20687.1| hypothetical protein CbuK_1525 [Coxiella burnetii CbuK_Q154]
Length = 199
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 2/153 (1%)
Query: 48 DESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE 107
+ H+ ++++ PI + +I +P E+ S+W M+ L+
Sbjct: 41 PAHSKTHLTILVSMPIPNPGYQTSAMIYMLTPYELSRYANSRWVAPPSEMLMPLLVQALR 100
Query: 108 NNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMS--LKIINAHDNSLVGQKV 165
G VV P Y++ + + + + I ++ +I + N +V
Sbjct: 101 QTGYFYAVVSPPFVGMTHYRLDTRLLKLQQEFFFPISRIRLTMEASLIKSGTNHVVANHR 160
Query: 166 FHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
F V +N + + N+A + +S I +
Sbjct: 161 FEVLVPALTNNPYGGVLAANKAAAIMSYRIAQF 193
>gi|86149476|ref|ZP_01067707.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596065|ref|ZP_01099302.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 84-25]
gi|218563238|ref|YP_002345018.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|85840258|gb|EAQ57516.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88190906|gb|EAQ94878.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360945|emb|CAL35746.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|284926843|gb|ADC29195.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni IA3902]
gi|315929477|gb|EFV08673.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
305]
Length = 199
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I LNS I+ + +Y W D + +++ FE + +T++
Sbjct: 51 LKIRNANAPLYLNSRAIVYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLL 109
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 110 SSTSSLSADYSLESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKIFNTKEKIEK 169
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EI+ W S+L
Sbjct: 170 KDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|313683002|ref|YP_004060740.1| hypothetical protein Sulku_1880 [Sulfuricurvum kujiense DSM 16994]
gi|313155862|gb|ADR34540.1| hypothetical protein Sulku_1880 [Sulfuricurvum kujiense DSM 16994]
Length = 199
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 32/175 (18%), Positives = 67/175 (38%), Gaps = 4/175 (2%)
Query: 28 SCFFHNNPVNIYDL-TESTKYDESVQ-RHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
C +N Y L + +S L +T + L ++II +
Sbjct: 16 GCSASTPTINEYTLFSSQISQPKSPPISSKTLSVTLSKSIGSLLGKNIIYLYENGQTGPY 75
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--DRHC 143
+ S+WSD +IQ L+A+ +++ D+ + S + +F D+
Sbjct: 76 LYSRWSDTPAALIQRSLLASLNEKALFASLSSATSLAQTDWMLESNLDAFYHRFYDDKSE 135
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
I ++ ++++ L+ K F V + +++L A ++ + IDW
Sbjct: 136 GYIDITYRLVDTRTKQLLASKRFTVFSPAASMDAKGGVEALKIATGELNRQCIDW 190
>gi|283957035|ref|ZP_06374507.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 1336]
gi|283791536|gb|EFC30333.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 1336]
Length = 199
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I LNS I+ + +Y W D + +++ FE + +T++
Sbjct: 51 LKIRNANAPWYLNSRAIVYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLL 109
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 110 SSTSSLNADYALESRINSFEQILNNNENYAQISISVNFINLENNQIIAHKIFNTKEKIEK 169
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EI+ W S+L
Sbjct: 170 KDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|57238660|ref|YP_179791.1| putative lipoprotein [Campylobacter jejuni RM1221]
gi|57167464|gb|AAW36243.1| lipoprotein, putative [Campylobacter jejuni RM1221]
gi|315059099|gb|ADT73428.1| Putative lipoprotein [Campylobacter jejuni subsp. jejuni S3]
Length = 199
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I LNS II + +Y W D + +++ FE + +T++
Sbjct: 51 LKIRNANAPLYLNSRAIIYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLL 109
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 110 SSTSSLSADYALESRINSFEQILNNNENYAQISVSVNFINLENNQIIAHKIFNTKEKIEK 169
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EI+ W S+L
Sbjct: 170 KDIRSTYNAFQKALNKIGNEIVFWVNSNLS 199
>gi|212212804|ref|YP_002303740.1| hypothetical protein CbuG_1273 [Coxiella burnetii CbuG_Q212]
gi|212011214|gb|ACJ18595.1| hypothetical protein CbuG_1273 [Coxiella burnetii CbuG_Q212]
Length = 199
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 26/153 (16%), Positives = 57/153 (37%), Gaps = 2/153 (1%)
Query: 48 DESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE 107
+ H+ ++++ PI + +I +P E+ S+W M+ L+
Sbjct: 41 PAHSKTHLTILVSMPIPNPGYQTSAMIYMLTPYELSRYANSRWVAPPSEMLMPLLVQALR 100
Query: 108 NNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMS--LKIINAHDNSLVGQKV 165
G VV P Y++ + + + + I ++ +I + N +V
Sbjct: 101 QTGYFYAVVSPPFVGMTHYRLDTRLLKLQQEFFFPISRIRLTMEASLIKSGTNHVVANHR 160
Query: 166 FHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
F V +N + + N+A + +S I +
Sbjct: 161 FEVLVPALTNNPYGGVLAANKAAAIMSYRIAQF 193
>gi|75675225|ref|YP_317646.1| ABC transporter substrate-binding protein [Nitrobacter winogradskyi
Nb-255]
gi|74420095|gb|ABA04294.1| ABC transporter substrate-binding protein [Nitrobacter winogradskyi
Nb-255]
Length = 101
Score = 98.1 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR-HCAIITM 148
W+D +P ++Q KL+ +FEN ++ G+ AD+Q++ +R F+I D A I +
Sbjct: 2 WADSIPNLLQAKLLESFENYDIAHAPLRSMDGVQADHQLLIDVRRFQITTDPEPVADIGL 61
Query: 149 SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ D +V ++F +KL + N AF
Sbjct: 62 N------KDVKVVAARLFEETQKLRTIEPDTASAAFNEAFD 96
>gi|157415869|ref|YP_001483125.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 81116]
gi|157386833|gb|ABV53148.1| lipoprotein, putative [Campylobacter jejuni subsp. jejuni 81116]
gi|307748506|gb|ADN91776.1| probable lipoprotein [Campylobacter jejuni subsp. jejuni M1]
gi|315931382|gb|EFV10351.1| conserved hypothetical protein [Campylobacter jejuni subsp. jejuni
327]
Length = 199
Score = 97.7 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 74/150 (49%), Gaps = 3/150 (2%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I T LNS I+ + +Y W D + +++ FE + +T++
Sbjct: 51 LKIRNANTPLYLNSRAIVYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLL 109
Query: 117 KPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ ADY + S I SFE + + + A I++S+ IN +N ++ K+F+ +EK+EK
Sbjct: 110 SSTSSLNADYALESRINSFEQILSNNENYAQISISVNFINLENNQIIAHKIFNTKEKIEK 169
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + +A ++I +EII W S+L
Sbjct: 170 KDIRSTYNAFQKALNKIGNEIIFWVNSNLS 199
>gi|296284589|ref|ZP_06862587.1| hypothetical protein CbatJ_13221 [Citromicrobium bathyomarinum
JL354]
Length = 205
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 34/207 (16%), Positives = 74/207 (35%), Gaps = 13/207 (6%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSC--FFHNNPVNIYDLTE----STKYDESVQRH 54
+D ++ + + S+ +L C F + P + LT + +
Sbjct: 2 IDVPATRMPRMASLRLSILATATFALGGCISFGEDPPPALLTLTPSVQIAEGAGPGGEAS 61
Query: 55 IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKIS 113
L + +P L+ + V+ P I YL + W D+ ++ Q L+ E G++
Sbjct: 62 GVLTVRQPEVPGSLSVTRVPVQVDPSTIAYLKDAVWVDRPSKLFQNLLVTTIRERTGRL- 120
Query: 114 TVVKP-NQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKL 172
V+ +D + +R F + ++T I + + + F
Sbjct: 121 -VLDDVESRAASDSVLRGTLREFGYDARSGAVVVTYDA--IRENGGK-LQTRRFTARVPG 176
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDWT 199
+LN A ++++ ++ DW
Sbjct: 177 VPAEASPVGVALNDAANQVAIDVADWI 203
>gi|205355661|ref|ZP_03222431.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346438|gb|EDZ33071.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni CG8421]
Length = 140
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 71/139 (51%), Gaps = 3/139 (2%)
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
LNS II + +Y W D + +++ FE + +T++ + ADY
Sbjct: 3 LNSRAIIYIDNGFSNKYAHYF-WGDLPSNLYSFLILSKFEQSNIFTTLLSSTSSLSADYA 61
Query: 128 IISAIRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ S I SFE N + + A I++S+ IN +N ++ K+F+ +EK+EK + +
Sbjct: 62 LESRINSFEQILNNNENYAQISVSVNFINLENNQIIAHKIFNTKEKIEKKDIRSTYNAFQ 121
Query: 186 RAFSRISSEIIDWTLSSLP 204
+A ++I +EI+ W S+L
Sbjct: 122 KALNKIGNEIVFWVNSNLS 140
>gi|294010010|ref|YP_003543470.1| ABC-type transport system auxiliary component (lipoprotein)
[Sphingobium japonicum UT26S]
gi|139001581|dbj|BAF51701.1| putative lipoprotein [Sphingobium japonicum]
gi|292673340|dbj|BAI94858.1| ABC-type transport system auxiliary component (lipoprotein)
[Sphingobium japonicum UT26S]
Length = 202
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 74/194 (38%), Gaps = 8/194 (4%)
Query: 16 CSLAVLLCTSLSSC--FFHNNPVNIYDLTESTKYDES----VQRHIQLIITEPITEKILN 69
LA + L+ C F P + L + K + + +P K+L+
Sbjct: 8 LGLAAVGALMLAGCVSFGGKPPERLLSLNAAQKVAPGTLRSASSGTSITVADPEAPKMLD 67
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+ + V +SP + Y+ QW+D + Q L + A +++
Sbjct: 68 TVRVPVITSPTSVAYVTKVQWADTPRHLFQKLLAETIAATSNRIVLDPGQYSADAGQRLM 127
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS-LNRAF 188
+ F ++ + A++T ++ + + ++ F + + + + LN A
Sbjct: 128 GELVDFGVDEASNSAVVTYDA-MLAGPGGTAIAKQRFTASAPIGGKIDANSVGAPLNAAA 186
Query: 189 SRISSEIIDWTLSS 202
+++++++ W SS
Sbjct: 187 NKVAADVAAWLASS 200
>gi|167647529|ref|YP_001685192.1| hypothetical protein Caul_3567 [Caulobacter sp. K31]
gi|167349959|gb|ABZ72694.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 217
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 68/185 (36%), Gaps = 8/185 (4%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE--KILNSEDIIVRSSPIEI 82
S F NP +Y + + + T + + ++ + E
Sbjct: 27 GCISLFPKTNPSGLYRFGHEAAAVSTTPTEKSFGVFKTTTVFTRAAMGDR-LLSVTNGEA 85
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI--- 139
Y+ ++W + + FE +G + +V + + A + +RSFE++
Sbjct: 86 AYIADARWVSPAIVLFDEAVARAFEADGSRARLVTRGETLKAVMALRLEVRSFEVDYLNG 145
Query: 140 --DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
++ + + D +L+G KVF K + + + ++A ++ SEI+
Sbjct: 146 PKAPPEVLVEIRAVMTRGADRALLGDKVFVARVKAADNRLSAIVPAYDQANGQVLSEIVA 205
Query: 198 WTLSS 202
W +
Sbjct: 206 WVNEA 210
>gi|94496557|ref|ZP_01303133.1| hypothetical protein SKA58_17672 [Sphingomonas sp. SKA58]
gi|94423917|gb|EAT08942.1| hypothetical protein SKA58_17672 [Sphingomonas sp. SKA58]
Length = 203
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 74/199 (37%), Gaps = 10/199 (5%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR----HIQLIITEPITE 65
K ++ LA S F P + L + K R LI+TEP
Sbjct: 5 KPHGVTAVLAAAFLLSGCVSFGGKPPERLLSLDAAHKVPSGTPRVAGNGRTLIVTEPEAP 64
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
K +++ + V++SP + Y+ QW+D + + L VV D
Sbjct: 65 KTVDTVRVPVQTSPTSVAYVTDVQWADTPRHLFRRLLAETISATT--DRVVLDTGQFSGD 122
Query: 126 --YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
++ + F I+ + AI+T ++ + ++ F + + +
Sbjct: 123 GGQRLTGELIDFGIDEAQQSAIVTYDAMLM-TPSGVALARQRFTASAPVGGKINATSVGA 181
Query: 184 -LNRAFSRISSEIIDWTLS 201
LN A +++++++ W +
Sbjct: 182 PLNAAANQVATDVAAWVAA 200
>gi|315498542|ref|YP_004087346.1| hypothetical protein Astex_1529 [Asticcacaulis excentricus CB 48]
gi|315416554|gb|ADU13195.1| protein of unknown function DUF330 [Asticcacaulis excentricus CB
48]
Length = 231
Score = 94.6 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 32/214 (14%), Positives = 77/214 (35%), Gaps = 16/214 (7%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSC---FFHNNPVNIYDLT----------ESTKYDESV 51
+ ++ ++ + L L T LS C PV +Y +
Sbjct: 2 MTRVTRRSLSLGLLTAGLATGLSGCITLLPEVKPVQLYSIRFNPALLEKDEVKAPPASPD 61
Query: 52 QRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGK 111
R + + + + I V E+ Y+ G +W+ + + F +
Sbjct: 62 ARPADVFVNFDGFPRAAAGDRI-VTIEGNEVSYVSGGRWASTAQGQFRDLMSEGFARHAS 120
Query: 112 ISTVVKPNQGIYADYQIISAIRSFEINID--RHCAIITMSLKIINAHDNSLVGQKVFHVE 169
+ + +Y++ +R FE R ++ + +++ D ++ +K E
Sbjct: 121 PEVRLGDQGRVSGNYRLDINVRRFEAVYAKRRPTVVVALDARLVRLKDRQVMAEKFISSE 180
Query: 170 EKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ K + I+ A SR++ ++I +T +++
Sbjct: 181 IVVRKGSLGPMIEGFESAASRVTVDVIAFTETAV 214
>gi|114320358|ref|YP_742041.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Alkalilimnicola ehrlichii MLHE-1]
gi|114226752|gb|ABI56551.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Alkalilimnicola ehrlichii MLHE-1]
Length = 208
Score = 93.5 bits (231), Expect = 1e-17, Method: Composition-based stats.
Identities = 32/180 (17%), Positives = 71/180 (39%), Gaps = 7/180 (3%)
Query: 24 TSLSSCFFHNNPVNIYDLTESTKYDESV--QRHIQLIITEPITEKILNSEDIIVRSSPIE 81
L+ +P Y LT + + + S + R E
Sbjct: 21 CGLALPGPAESP-RTYSLTWAPSEAPGGSEPLAGAVRVMATQAAPGYTSSAMRYRRDDWE 79
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI----RSFEI 137
+Q QW + RM+ L+A E++G V+ + A ++ + + FE
Sbjct: 80 LQRFAHHQWVEPPARMLTPALVAVLEHDGPFRQVIHGPTVVDAPLRLHTELKRLEHRFEH 139
Query: 138 NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
+ D ++T+ ++++++ ++ + FH E E+ + + ++ NRA + + +I D
Sbjct: 140 DEDAGRVVLTLRIQLLDSEAGEVLTTRRFHAEVTAERRHPVAGAKAANRALAELLPQITD 199
>gi|332187462|ref|ZP_08389200.1| hypothetical protein SUS17_2543 [Sphingomonas sp. S17]
gi|332012623|gb|EGI54690.1| hypothetical protein SUS17_2543 [Sphingomonas sp. S17]
Length = 186
Score = 92.3 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 74/185 (40%), Gaps = 3/185 (1%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
SL + C S + + + + R + I P T + L + + V
Sbjct: 2 ASLPLAGCISFGAKPPPSLMTLQAQSAPTVGQTQDSARAKSITIQVPTTPQELATARVPV 61
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQGIYADYQIISAIRS 134
+ + I Y+ +QW++ R+ + G++ + + D ++ +R
Sbjct: 62 QENATSIAYVKDAQWAEPPARLFARLVSDTLTAREGRVVLSARESVVDSGD-RLAGELRQ 120
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F ++ RH A++ ++ + + + ++ F + K + +LN+A ++++ +
Sbjct: 121 FGMDAVRHDAVVIFDASLMR-NGQTAIEKRRFEARVPVGKIDAQSVGPALNQAANQVAQQ 179
Query: 195 IIDWT 199
+ DW
Sbjct: 180 VADWV 184
>gi|88810289|ref|ZP_01125546.1| hypothetical protein NB231_14453 [Nitrococcus mobilis Nb-231]
gi|88791919|gb|EAR23029.1| hypothetical protein NB231_14453 [Nitrococcus mobilis Nb-231]
Length = 156
Score = 90.0 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/148 (16%), Positives = 63/148 (42%), Gaps = 3/148 (2%)
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
+ P ++ + R +P EI+Y S+W D RM++ L + G +
Sbjct: 2 VEPPQVAAGYDTTAMAYRRTPWEIRYYSLSRWVDDPARMLREALTSALNQLGPFRSAFAS 61
Query: 119 NQGIYADYQIISAIRSFEINID---RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175
GI DY + + + E + + + ++++N ++L+ +V + +
Sbjct: 62 PAGIAVDYSLRTELLRLEQDFSNAPPSRERLVVRVQLVNLAHDTLLASQVLELNTTAPSE 121
Query: 176 NKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ + + N A ++++E++ + +L
Sbjct: 122 DAYGGVVAANTALQQLAAEVVTFCRKAL 149
>gi|329890326|ref|ZP_08268669.1| hypothetical protein BDIM_20270 [Brevundimonas diminuta ATCC 11568]
gi|328845627|gb|EGF95191.1| hypothetical protein BDIM_20270 [Brevundimonas diminuta ATCC 11568]
Length = 200
Score = 89.6 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/202 (19%), Positives = 76/202 (37%), Gaps = 20/202 (9%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI-------QLIITEPIT 64
I S+A+ C LSS +PV +Y ++ Y + + P
Sbjct: 1 MIAGASVALSGCALLSS----PDPVQLYRFGGASAYAGTGATSACPDVHVSMRRVDFPEA 56
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+ + I+ + E Y+ G++W + + L F +G TV+
Sbjct: 57 AR---GDRIL-AVTGTEAAYIKGARWVSPAETLFEEALRNAFL-DGGTCTVLSSGPLTRD 111
Query: 125 DYQIISAIRSFEINIDRHCAI----ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ +R FE + A+ I + L+++ D S+V + V E + +
Sbjct: 112 GLLLSVDVRRFEASYVAPGAVPDATIVVLLRLVRPGDRSIVAEDRITVSENAGVNRQSAI 171
Query: 181 IQSLNRAFSRISSEIIDWTLSS 202
+ + +RA + S +I+ WT
Sbjct: 172 VAAFDRATAETSRQIVLWTDQQ 193
>gi|328954408|ref|YP_004371742.1| protein of unknown function DUF330 [Desulfobacca acetoxidans DSM
11109]
gi|328454732|gb|AEB10561.1| protein of unknown function DUF330 [Desulfobacca acetoxidans DSM
11109]
Length = 216
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 34/205 (16%), Positives = 83/205 (40%), Gaps = 8/205 (3%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLII 59
M + N ++ + + +++ + C +N Y L + S + +
Sbjct: 1 MQRISNLFNRQLAAATAAVIMMTLTAIGCGKPPVTLNRYLLEYPSPVSGSRPTLPDSIRV 60
Query: 60 TEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV-VKP 118
+ L + +I R P E ++W ++ L+ + N+G V
Sbjct: 61 ELFAAVQSLTTTAMIYRPKPYEASSYAYNRWQVSPSHLVTDYLLRDLRNSGLFQGVFGYQ 120
Query: 119 NQGIYADYQIISAIRSF-EINI-DRHCAIITMSLKIINAH----DNSLVGQKVFHVEEKL 172
G + +++ A++ F E++ D A++ +S+ +++ + ++ Q+ + EE +
Sbjct: 121 QSGGVSRFKLEGAVQEFAEVDAPDGWKAVLAISINLLDTNQEEITRRVIMQQNYCSEESM 180
Query: 173 EKDNKLHFIQSLNRAFSRISSEIID 197
L ++RA RIS+++I
Sbjct: 181 PDQTPLGLAGGMSRAMERISAQVIA 205
>gi|297538916|ref|YP_003674685.1| hypothetical protein M301_1730 [Methylotenera sp. 301]
gi|297258263|gb|ADI30108.1| hypothetical protein M301_1730 [Methylotenera sp. 301]
Length = 219
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 21/143 (14%), Positives = 51/143 (35%), Gaps = 2/143 (1%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
L++ +S ++ P +++Y +QW D RM+ ++ + S V
Sbjct: 66 TLVVNLSTAAAGFDSARMVYSRVPYKLEYFAHNQWIDTPARMLTPLILNTLKAKSLFSAV 125
Query: 116 VKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKLE 173
+ Y + + I + + +L+ +I+ + +V + +
Sbjct: 126 TLTPSTANSHYSLDTQIIRLQQEFFSPQSSERFTLRVTLIDNIKHQVVFVRELEAVVTAK 185
Query: 174 KDNKLHFIQSLNRAFSRISSEII 196
DN + + N A + E+
Sbjct: 186 TDNPYGGVVAANEAVQILLEELA 208
>gi|149187029|ref|ZP_01865336.1| hypothetical protein ED21_31249 [Erythrobacter sp. SD-21]
gi|148829318|gb|EDL47762.1| hypothetical protein ED21_31249 [Erythrobacter sp. SD-21]
Length = 201
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 69/196 (35%), Gaps = 2/196 (1%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPI 63
+ K K II+ +L + C S S + + + L++ E
Sbjct: 7 AMIKHFKFAIIAPALLLGGCLSFGSEPPESLLTLTPTASAPAGTGGTSTAGTALVLQEFQ 66
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
L+ + V+ + E+ YL + W +K R+ + + + + G
Sbjct: 67 APSSLDVTRVPVQVTDTELAYLQDAVWVEKPARLFRRLMAETIRTRSSRVVIDGDDPGAL 126
Query: 124 ADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
A+ ++ +R+F + + + + S V + F + +
Sbjct: 127 AENRLTGTLRAFGYDARDGSVRVVFDA--VRPGEGSAVVTRRFEAVVPGVPADVSSVGPA 184
Query: 184 LNRAFSRISSEIIDWT 199
LN+A + ++ ++ +W
Sbjct: 185 LNQAANDVAGQVAEWV 200
>gi|94498319|ref|ZP_01304878.1| hypothetical protein SKA58_19090 [Sphingomonas sp. SKA58]
gi|94422199|gb|EAT07241.1| hypothetical protein SKA58_19090 [Sphingomonas sp. SKA58]
Length = 216
Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 62/193 (32%), Gaps = 12/193 (6%)
Query: 21 LLCTSLSSCFFHNNPVNIYDL----TESTKYDESVQRHIQLIITEPITEKILNSEDIIVR 76
+L S + +++ + + + P + + + ++
Sbjct: 1 MLLASCGNLLGGGERADLFRFGVVDPTPVTGMQGALPTRSVSLLRPRFSQEVEGDRMLTT 60
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
+ YL G +W +P + L+ + + A + + I FE
Sbjct: 61 RGERAL-YLKGVRWVAPVPDLFTQALMRQYAARAPDVRLTGVRNATGASHALQIDIERFE 119
Query: 137 INID-------RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
II + + D V K F V+E + + + +RA +
Sbjct: 120 ARYALDGGEKAPPTVIIEGDATLFDLSDRRPVEAKRFLVQEPASANTTSGIVAAFDRAVA 179
Query: 190 RISSEIIDWTLSS 202
R ++E+ DW+ +
Sbjct: 180 RSTTELTDWSADT 192
>gi|23011784|ref|ZP_00052043.1| COG3218: ABC-type uncharacterized transport system, auxiliary
component [Magnetospirillum magnetotacticum MS-1]
Length = 125
Score = 86.9 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 1/116 (0%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+ + + V L C P+ +DL + ++++EP+ + +
Sbjct: 10 LPGRGLRAGALVASLAFLGGCGGGATPL-TFDLAALPGQPRAGGPARSIVVSEPVGLQPM 68
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
++ IIVR + + +L G QW+D+LPR+IQ ++I + EN G++ +V P
Sbjct: 69 EADRIIVREAGGSLSFLGGGQWADRLPRLIQTRVIQSLENTGRLRSVSYPGDRCRP 124
>gi|302382568|ref|YP_003818391.1| hypothetical protein Bresu_1456 [Brevundimonas subvibrioides ATCC
15264]
gi|302193196|gb|ADL00768.1| protein of unknown function DUF330 [Brevundimonas subvibrioides
ATCC 15264]
Length = 201
Score = 86.9 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 80/203 (39%), Gaps = 14/203 (6%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT---ESTKYDESVQRHIQLI-ITEPI 63
+I+ + + AV L S + +PV +Y + + ++L + P
Sbjct: 1 MIRSILATAVAAVTL--SGCALLSSPDPVQLYRFGTTGATPAQAVAEPVQVKLRAVEFPQ 58
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
+ D ++ + + ++ G++W ++ L F + ++ +
Sbjct: 59 ASQG----DRLLGVTGTQAAFIAGARWVSPAQQLYADSLEGAFAGQARAVRLIGRRELTP 114
Query: 124 ADYQIISAIRSFEINID----RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ +RSFE D +I+ +++ + ++V ++ F V + ++
Sbjct: 115 TTRVLDIDMRSFETRYDYAGGVPTIVISARARLLRFPERTVVAEQTFEVSQPASENRIAT 174
Query: 180 FIQSLNRAFSRISSEIIDWTLSS 202
+ + + A ++S+I+ WT ++
Sbjct: 175 IVDAYDVATRDLNSQIVAWTDTN 197
>gi|326388336|ref|ZP_08209932.1| hypothetical protein Y88_3219 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207068|gb|EGD57889.1| hypothetical protein Y88_3219 [Novosphingobium nitrogenifigens DSM
19370]
Length = 215
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 25/176 (14%), Positives = 56/176 (31%), Gaps = 8/176 (4%)
Query: 28 SCFFHNNPVNIYDLTE----STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
P + LT ++ S + L + EP T L + V +
Sbjct: 43 GLGNAKVPPTLLTLTPQAVPASGATISGKPDSALSVMEPETPAKLAVLRVPVAVDESRVA 102
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
YL +QW ++ R+ Q L ++ + + + + H
Sbjct: 103 YLRQAQWVERPSRLFQHLLAETLRAKD--GHLISEGDSLTHGPILSGRLIDMGYDAQDHA 160
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
++ + + + + F + +LNRA ++++ ++ DW
Sbjct: 161 VVVRFDA--VRQMPDGTIATRRFDASVPHVDASAEEVGPALNRAANQVAQQVADWV 214
>gi|141212|sp|P26880|YPA1_LEGPN RecName: Full=Uncharacterized protein in pal 5'region; AltName:
Full=ORFU
Length = 103
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 19/100 (19%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 106 FENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKII--NAHDNSLVGQ 163
+++G V ADY++ + + E N + +++ S KI+ + DN ++G
Sbjct: 1 LQSSGYFYAVTSSPYSEEADYRLDTQLLKLEQNFIKKPSVLEFSAKIVLTHISDNQIIGS 60
Query: 164 KVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
++ ++ +D + + N+A R ++ D+ +S +
Sbjct: 61 RIVSLQIPCSQDTPYGGVIAANQATFRFTATATDFVVSHI 100
>gi|85707664|ref|ZP_01038730.1| hypothetical protein NAP1_00475 [Erythrobacter sp. NAP1]
gi|85689198|gb|EAQ29201.1| hypothetical protein NAP1_00475 [Erythrobacter sp. NAP1]
Length = 203
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 72/199 (36%), Gaps = 12/199 (6%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRH-------IQLIITEPI 63
++ SLA+ C SL P ++ LT + + + P
Sbjct: 9 SALVGASLALSACVSLGGAEP---PESLLSLTPTAMAPAGSGASHNRAGESSAIAVLTPE 65
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
L+ + + V S EI YL + W +K R+ + L G + + +
Sbjct: 66 VPAKLDVQRVPVNVSDTEIAYLQEAVWVEKPARLFRRLLGETLRTRGSMLVLDGEDSPTV 125
Query: 124 ADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
A + ++ + +++ + I D+ V + F E+ +
Sbjct: 126 ATRYLRGSLIELGYDAPTSSVVVSFNA--ILTSDDGTVTSRRFEAREEGILAEASDVGPA 183
Query: 184 LNRAFSRISSEIIDWTLSS 202
LNRA + ++ E+ DW +++
Sbjct: 184 LNRAANTLAGEVADWAIAN 202
>gi|283953733|ref|ZP_06371264.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 414]
gi|283794774|gb|EFC33512.1| putative lipoprotein [Campylobacter jejuni subsp. jejuni 414]
Length = 114
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Query: 94 LPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI--NIDRHCAIITMSLK 151
+ +++ FE + +T++ + A+Y + S I SFE N D + A I++S+
Sbjct: 2 PSNLYSSLILSKFEQSNIFTTLLSSTSSLNANYVLESRINSFEQILNGDENYAQISISVN 61
Query: 152 IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLP 204
IN +N ++ K+F+++E +EK + + +A ++I +EII W S+L
Sbjct: 62 FINLENNQIIAHKIFNIKENIEKKDIRSTYNAFQKALNKIGNEIIFWVNSNLS 114
>gi|148555656|ref|YP_001263238.1| ABC transporter auxiliary component-like protein [Sphingomonas
wittichii RW1]
gi|148500846|gb|ABQ69100.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Sphingomonas wittichii RW1]
Length = 195
Score = 85.0 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 21/141 (14%), Positives = 54/141 (38%), Gaps = 2/141 (1%)
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
++ P L ++ I V+ + YL + W D ++ + L E
Sbjct: 54 VSAPALPAALRNQRIAVQ-TGAAFAYLPKAAWVDTPSQLFRSVLAETIEARTGRFVPDTR 112
Query: 119 NQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
N I D ++ + +F++ + ++ + + + + + F + ++
Sbjct: 113 NGAITPDTRLSGTLLAFQLLGGQGKVLVIYDATLAKSGSDEIRA-RRFERSVPVAGEDAR 171
Query: 179 HFIQSLNRAFSRISSEIIDWT 199
+LN A + I++++ DW
Sbjct: 172 SVAAALNEATNGIATDVADWI 192
>gi|307297004|ref|ZP_07576820.1| protein of unknown function DUF330 [Sphingobium chlorophenolicum
L-1]
gi|306877530|gb|EFN08758.1| protein of unknown function DUF330 [Sphingobium chlorophenolicum
L-1]
Length = 200
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 67/182 (36%), Gaps = 8/182 (4%)
Query: 16 CSLAVLLCTSLSSC--FFHNNPVNIYDLTESTKYDESVQRHIQ----LIITEPITEKILN 69
LA + L+ C F P + L + K R + + +P K+L+
Sbjct: 6 LGLAAVGALMLAGCVSFGGKPPERLLSLNAAQKVAPGTLRSASSGTAITVADPEAPKMLD 65
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+ + V +SP + Y+ QW+D + Q L + A +++
Sbjct: 66 TVRVPVITSPTSVAYVTKVQWADTPRHLFQKLLAETIAATSSRIVLDPGQYSADAGQRLM 125
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS-LNRAF 188
+ F ++ + A++T ++ + + ++ F + + + + LN A
Sbjct: 126 GELVDFGLDEASNSAVVTYDA-MLAGPGGTAIAKQRFTASVPVGGKIDANSVGAPLNAAA 184
Query: 189 SR 190
++
Sbjct: 185 NK 186
>gi|85373090|ref|YP_457152.1| hypothetical protein ELI_01315 [Erythrobacter litoralis HTCC2594]
gi|84786173|gb|ABC62355.1| hypothetical protein ELI_01315 [Erythrobacter litoralis HTCC2594]
Length = 197
Score = 83.5 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 53/158 (33%), Gaps = 2/158 (1%)
Query: 42 TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLK 101
T S L + EP + L+ + V+ + YL + W +K R+ +
Sbjct: 40 TASAGQPTQGTGQTALTVVEPTAPQRLSVNRVPVQVDDANVAYLKDAMWVEKPTRLFRRL 99
Query: 102 LIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLV 161
L +G + + I Q+ ++ F + I+T + ++
Sbjct: 100 LSETIRASGNRVVIDGFDPTIATGDQLRGSLVDFGYDARTSSVIVTFDA--VREGSGDVI 157
Query: 162 GQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
+ F +LN A + ++ ++ DW
Sbjct: 158 TTQRFTSVVPGVAAEAGPVGDALNEAANDVAQQVADWV 195
>gi|82703105|ref|YP_412671.1| putative lipoprotein [Nitrosospira multiformis ATCC 25196]
gi|82411170|gb|ABB75279.1| putative lipoprotein [Nitrosospira multiformis ATCC 25196]
Length = 217
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 66/180 (36%), Gaps = 15/180 (8%)
Query: 33 NNPVNIYDL--------TESTKYDESVQRHIQLIITEPITEKILNSEDIIVR---SSPIE 81
PV +YD + + + Q L++T+ I L+S I R P
Sbjct: 23 PAPVAVYDFGLQPLPVEPSAAETGGNRQLRTSLLVTDTIAPAWLDSTAIHYRLAYDDPTR 82
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
S+W+ +++ + + V+ +G +ADY + + F D
Sbjct: 83 FLAYRSSRWASTPAKLLTQR-VRTRIAALNEGGVMNTGEGAHADYILRVDLEEFAQVFDT 141
Query: 142 HC---AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
AI+ + +I+ V Q+ F VE N +++L A ++ ++ W
Sbjct: 142 PSRSSAIVQLRASLIDRTTRYPVSQRSFGVEVPAPTANAAGAVKALTEASDQLIESLVGW 201
>gi|46200919|ref|ZP_00056200.2| COG3218: ABC-type uncharacterized transport system, auxiliary
component [Magnetospirillum magnetotacticum MS-1]
Length = 203
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 70/180 (38%), Gaps = 6/180 (3%)
Query: 19 AVLLCTSLSSCFFHNNPVNIY---DLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
A LL L++C P + + ++ + L + +T + +E +
Sbjct: 9 AALLLFVLTACTGPAAPPDAFYRIEVAAPAQRLPKPVLPGVLEVNR-LTSDGVAAERAVA 67
Query: 76 --RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
R+ + + WS+ ++Q +L +G VV P + +D+ + +R
Sbjct: 68 FARTEGGALAHYKYDFWSEPPGILLQDRLEHYLSESGLAGRVVTPELRVLSDWVLRGKVR 127
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
FE DR + + L ++ A D LV + + V D +++ +A + I +
Sbjct: 128 RFEQIADRSEVVADLELAVVGARDGRLVLLETYAVRIPAASDRVEDAARAMEKAVNEIFA 187
>gi|315639125|ref|ZP_07894292.1| lipoprotein [Campylobacter upsaliensis JV21]
gi|315480829|gb|EFU71466.1| lipoprotein [Campylobacter upsaliensis JV21]
Length = 192
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 3/145 (2%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
L I +P LNS++II + Y W+D + L+ E +G + V
Sbjct: 44 TLQILKPKVPLYLNSKEIIYVKKGLSGTY-AYHFWADLPSNFYRFVLLDKLEKSGIFNAV 102
Query: 116 VKPNQGIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLE 173
V+ D + S + SFE I + + A I++S+ + + + ++ + F V LE
Sbjct: 103 VEKANLTPVDLALKSRLESFEQIITSEGNFAKISLSVTLFDIKEQKILENEFFEVLVVLE 162
Query: 174 KDNKLHFIQSLNRAFSRISSEIIDW 198
+ R + + +II W
Sbjct: 163 DLQMNTLVVGFERGLNELCDKIIAW 187
>gi|152992945|ref|YP_001358666.1| hypothetical protein SUN_1356 [Sulfurovum sp. NBC37-1]
gi|151424806|dbj|BAF72309.1| hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 191
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 75/177 (42%), Gaps = 5/177 (2%)
Query: 27 SSCFFHNNPV-NIYDLTES--TKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
S C F PV +Y L T + R+ L ++ P+ +++ S +
Sbjct: 13 SGCSFKEAPVMKVYALATPSITPVASAQYRNKILKVSYPVAVNEKLGDEMHYSYSLTDRG 72
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE--INIDR 141
+ S+W++ + R++Q +I VV + + ++ + + F + +
Sbjct: 73 TYLNSRWANDVGRLLQGNIIQTLSQARLFKVVVPYTSDLDENLRLEAIVFDFSHHVRGEA 132
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
A+ ++ +INA LV + F E + ++++ NR +++S ++++W
Sbjct: 133 SYAVASIQFTLINAETGKLVKARRFSYREATPTTDAKGYMEATNRIMAKLSHDLVNW 189
>gi|307720551|ref|YP_003891691.1| hypothetical protein Saut_0630 [Sulfurimonas autotrophica DSM
16294]
gi|306978644|gb|ADN08679.1| conserved hypothetical protein [Sulfurimonas autotrophica DSM
16294]
Length = 205
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/197 (16%), Positives = 71/197 (36%), Gaps = 7/197 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT---ESTKYDESVQRHIQLIITEPITE 65
+K ++I+ + + ++ C N Y L E K ++ L + + ++
Sbjct: 1 MKNRLITLWITCMGLFLVTGCTSPTPAQNEYRLNMNLEVLKAGKTKCSQKTLKVEQAFSD 60
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
K+ S + ++W + ++ +V + D
Sbjct: 61 KLFMSLKMYYVKGKYAQYAYTRARWVQSPNDKVTEEITRFLRAMQLFKSVQTADSKTKND 120
Query: 126 YQIISAIRSFEINIDRHC----AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
+++ I F D + I + +IN + +V K FH +EK +N L +
Sbjct: 121 FKLEINIEDFMQYFDENEKNSYVNIAFTCSLINTATHKIVATKTFHAKEKTSSNNALGGV 180
Query: 182 QSLNRAFSRISSEIIDW 198
++L A ++I E W
Sbjct: 181 KALESALNKILKECGLW 197
>gi|254196393|ref|ZP_04902817.1| putative lipoprotein [Burkholderia pseudomallei S13]
gi|254295956|ref|ZP_04963413.1| putative lipoprotein [Burkholderia pseudomallei 406e]
gi|157805759|gb|EDO82929.1| putative lipoprotein [Burkholderia pseudomallei 406e]
gi|169653136|gb|EDS85829.1| putative lipoprotein [Burkholderia pseudomallei S13]
Length = 212
Score = 82.3 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 72/202 (35%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAAYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ ++ + ++GQ+ F +
Sbjct: 122 ADDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARVTLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 181 AAGGAQALATASDALVSQLVAW 202
>gi|126439217|ref|YP_001057487.1| putative lipoprotein [Burkholderia pseudomallei 668]
gi|126218710|gb|ABN82216.1| putative lipoprotein [Burkholderia pseudomallei 668]
Length = 212
Score = 82.3 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 72/202 (35%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAAYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ ++ + ++GQ+ F +
Sbjct: 122 ADDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARVTLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 181 AAGGAQALATASDALVSQLVAW 202
>gi|313202098|ref|YP_004040756.1| hypothetical protein MPQ_2375 [Methylovorus sp. MP688]
gi|312441414|gb|ADQ85520.1| conserved hypothetical protein [Methylovorus sp. MP688]
Length = 191
Score = 81.9 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 68/197 (34%), Gaps = 21/197 (10%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
++ + ++ C SL+ + P +D + + Q I + LN++
Sbjct: 6 TLLILAGSLSACLSLNGNKPQSGP-QTFDF---GLGEPGERIATQTSIENIRSGDALNNK 61
Query: 72 DIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
I R + ++ Y S+W+ ++ KL + +
Sbjct: 62 RIRYRLAYQNAQQVAYYADSRWTAPPAELLTQKL-----RTRQAPAATSNGC------LL 110
Query: 129 ISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
++ SF+ D A ++ +S + +V + F + + +L+
Sbjct: 111 TLSLDSFDQVFDSPTASHGLVQISASLQQKKSRQIVASRTFQASSPAPTADAAGGVAALS 170
Query: 186 RAFSRISSEIIDWTLSS 202
+A ++ +E + W S
Sbjct: 171 KASDQLLTEALTWAESQ 187
>gi|239787373|emb|CAX83849.1| ABC-type uncharacterized transport system, auxiliary component
[uncultured bacterium]
Length = 196
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 30/173 (17%), Positives = 64/173 (36%), Gaps = 4/173 (2%)
Query: 29 CFFHNNPV-NIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS--SPIEIQYL 85
C P + Y LT + L++ + + + P ++
Sbjct: 19 CGGAPPPAEHFYRLTTPVVAPSAKPLPGILVVERLRADGVTGERPMAHSRADQPKNLETY 78
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR-HCA 144
W++ RM+Q L+ + + S V+ + + + + FE +
Sbjct: 79 RYHFWTEAPGRMLQQHLVKSLNDAKAASQVLTDEVKVEGVWLLKGRLLHFEQVLGGQPKV 138
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
+I + ++ A D SLV ++ EE + D+ + ++ +AF R+S I
Sbjct: 139 VIEADMTLMKAKDYSLVHHGLYREEEPAQGDSPAAAVDAMQKAFERLSQRIAA 191
>gi|254000135|ref|YP_003052198.1| hypothetical protein Msip34_2434 [Methylovorus sp. SIP3-4]
gi|253986814|gb|ACT51671.1| protein of unknown function DUF330 [Methylovorus sp. SIP3-4]
Length = 191
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 68/197 (34%), Gaps = 21/197 (10%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
++ + ++ C SL+ + P +D + + Q I + LN++
Sbjct: 6 TLLILAGSLSACLSLNGNKPQSGP-QTFDF---GLGEPGERIATQTSIENIRSGDALNNK 61
Query: 72 DIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
I R + ++ Y S+W+ ++ KL + +
Sbjct: 62 RIRYRLAYQNAQQVAYYADSRWTAPPAELLTQKL-----RTRQAPAATSNGC------LL 110
Query: 129 ISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
++ SF+ D A ++ +S + +V + F + + +L+
Sbjct: 111 TLSLDSFDQVFDSPTASHGLVQISASLQQKKSRQIVASRTFQASSPAPTADAAGGVAALS 170
Query: 186 RAFSRISSEIIDWTLSS 202
+A ++ +E + W S
Sbjct: 171 KASDQLLTEALTWAESQ 187
>gi|126451562|ref|YP_001064736.1| putative lipoprotein [Burkholderia pseudomallei 1106a]
gi|217419701|ref|ZP_03451207.1| putative lipoprotein [Burkholderia pseudomallei 576]
gi|242317856|ref|ZP_04816872.1| putative lipoprotein [Burkholderia pseudomallei 1106b]
gi|126225204|gb|ABN88744.1| putative lipoprotein [Burkholderia pseudomallei 1106a]
gi|217397005|gb|EEC37021.1| putative lipoprotein [Burkholderia pseudomallei 576]
gi|242141095|gb|EES27497.1| putative lipoprotein [Burkholderia pseudomallei 1106b]
Length = 212
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAVYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + + ++GQ+ F +
Sbjct: 122 GDDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARATLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 181 AAGGAQALATASDALVSQLVAW 202
>gi|254187924|ref|ZP_04894436.1| putative lipoprotein [Burkholderia pseudomallei Pasteur 52237]
gi|157935604|gb|EDO91274.1| putative lipoprotein [Burkholderia pseudomallei Pasteur 52237]
Length = 212
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAVYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + + ++GQ+ F +
Sbjct: 122 ADDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARATLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 181 AAGGAQALATASDALVSQLVAW 202
>gi|57505621|ref|ZP_00371548.1| probable lipoprotein Cj1649 , putative [Campylobacter upsaliensis
RM3195]
gi|57016168|gb|EAL52955.1| probable lipoprotein Cj1649 , putative [Campylobacter upsaliensis
RM3195]
Length = 192
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 58/145 (40%), Gaps = 3/145 (2%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
L I +P LNS++II + Y W+D + L+ E + + V
Sbjct: 44 TLQILKPKVPLYLNSKEIIYVKKGLSGTY-AYHFWADLPSNFYRFVLLDKLEKSDIFNAV 102
Query: 116 VKPNQGIYADYQIISAIRSFE--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLE 173
V+ D + S + SFE I + + A I++S+ + + + ++ + F V LE
Sbjct: 103 VEKANLTPVDLALKSRLESFEQIITSEGNFAKISLSVTLFDIKEQKILENEFFEVLVVLE 162
Query: 174 KDNKLHFIQSLNRAFSRISSEIIDW 198
+ R + + II W
Sbjct: 163 DLQMNTLVVGFERGLNELCDRIIAW 187
>gi|53724949|ref|YP_101912.1| lipoprotein [Burkholderia mallei ATCC 23344]
gi|121598230|ref|YP_991580.1| putative lipoprotein [Burkholderia mallei SAVP1]
gi|124384124|ref|YP_001027347.1| putative lipoprotein [Burkholderia mallei NCTC 10229]
gi|126448054|ref|YP_001082715.1| putative lipoprotein [Burkholderia mallei NCTC 10247]
gi|167004397|ref|ZP_02270155.1| putative lipoprotein [Burkholderia mallei PRL-20]
gi|238561974|ref|ZP_00441174.2| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|254176799|ref|ZP_04883456.1| putative lipoprotein [Burkholderia mallei ATCC 10399]
gi|254202025|ref|ZP_04908389.1| putative lipoprotein [Burkholderia mallei FMH]
gi|254207356|ref|ZP_04913707.1| putative lipoprotein [Burkholderia mallei JHU]
gi|254357613|ref|ZP_04973887.1| putative lipoprotein [Burkholderia mallei 2002721280]
gi|52428372|gb|AAU48965.1| lipoprotein, putative [Burkholderia mallei ATCC 23344]
gi|121227040|gb|ABM49558.1| putative lipoprotein [Burkholderia mallei SAVP1]
gi|124292144|gb|ABN01413.1| putative lipoprotein [Burkholderia mallei NCTC 10229]
gi|126240924|gb|ABO04017.1| putative lipoprotein [Burkholderia mallei NCTC 10247]
gi|147747919|gb|EDK54995.1| putative lipoprotein [Burkholderia mallei FMH]
gi|147752898|gb|EDK59964.1| putative lipoprotein [Burkholderia mallei JHU]
gi|148026677|gb|EDK84762.1| putative lipoprotein [Burkholderia mallei 2002721280]
gi|160697840|gb|EDP87810.1| putative lipoprotein [Burkholderia mallei ATCC 10399]
gi|238523566|gb|EEP87004.1| conserved hypothetical protein [Burkholderia mallei GB8 horse 4]
gi|243060279|gb|EES42465.1| putative lipoprotein [Burkholderia mallei PRL-20]
Length = 212
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTEP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAVYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + + ++GQ+ F +
Sbjct: 122 GDDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARATLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 181 AAGGAQALATASDALVSQLVAW 202
>gi|268678741|ref|YP_003303172.1| hypothetical protein Sdel_0099 [Sulfurospirillum deleyianum DSM
6946]
gi|268616772|gb|ACZ11137.1| protein of unknown function DUF330 [Sulfurospirillum deleyianum DSM
6946]
Length = 198
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 64/182 (35%), Gaps = 10/182 (5%)
Query: 27 SSCFFHN---NPVNIYDLTESTKYDE-SVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
S C F P N Y L + + + L I T LNS I + I
Sbjct: 15 SGCSFKETTLKPYN-YSLEPMVQLKRFTTHTNDVLKIARIDTPSGLNSRAIQYK-KGGAI 72
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
WS+ +Q + ++ +V+ + + S +++FE D +
Sbjct: 73 LPYKYGTWSETPSLKLQHLITEALQDQNHFESVISGTSMASNNLVLESVLQNFEEVFDEN 132
Query: 143 C---AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF-IQSLNRAFSRISSEIIDW 198
+++ ++++ ++G ++ + N +++ N A + + E+ W
Sbjct: 133 EKSHVYVSLRVRLVELKSGEVLGSVRLSSKQPVTNTNGAAGTVEAFNLATAEVIQELAVW 192
Query: 199 TL 200
Sbjct: 193 IN 194
>gi|254420144|ref|ZP_05033868.1| hypothetical protein BBAL3_2454 [Brevundimonas sp. BAL3]
gi|196186321|gb|EDX81297.1| hypothetical protein BBAL3_2454 [Brevundimonas sp. BAL3]
Length = 216
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/216 (15%), Positives = 73/216 (33%), Gaps = 23/216 (10%)
Query: 8 IIKKKI-ISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES---VQRHIQLIITEPI 63
+I+ + + V++ S +PV Y + + + I
Sbjct: 1 MIRSLVQLGAVAGVVVSLGGCSLLSTPDPVQNYRFGLPLDAPSAEGDTPASLSVSIRRIE 60
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN-NGKISTVVKPNQGI 122
+ + I+ + E Y+ G++W + L A F N +I + + G
Sbjct: 61 FPEATGDDRIL-GVTGTETAYIGGARWVSPAATLFDDSLKAAFANRADQIRVLGRREPG- 118
Query: 123 YADYQIISAIRSFEINIDRHC----AIITMSLKIINAHDNSLVGQ------------KVF 166
+ + +FE +IT ++ + + G +VF
Sbjct: 119 TPPLVLQVTVTTFEARYAAPGPTPDVVITARAQLRSTPERRTGGDAAIRPEQGRSVERVF 178
Query: 167 HVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
V + ++ + + + A I+++I DWT+ S
Sbjct: 179 TVTQPAGENRISAIVAAFDTATRDINTQIADWTIQS 214
>gi|167901082|ref|ZP_02488287.1| putative lipoprotein [Burkholderia pseudomallei NCTC 13177]
Length = 212
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAAYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + + ++GQ+ F +
Sbjct: 122 GDDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARATLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 181 AAGGAQALATASDALVSQLVAW 202
>gi|76809584|ref|YP_332029.1| hypothetical protein BURPS1710b_0615 [Burkholderia pseudomallei
1710b]
gi|134279622|ref|ZP_01766334.1| putative lipoprotein [Burkholderia pseudomallei 305]
gi|167909302|ref|ZP_02496393.1| putative lipoprotein [Burkholderia pseudomallei 112]
gi|167917334|ref|ZP_02504425.1| putative lipoprotein [Burkholderia pseudomallei BCC215]
gi|226193659|ref|ZP_03789262.1| putative lipoprotein [Burkholderia pseudomallei Pakistan 9]
gi|237810638|ref|YP_002895089.1| hypothetical protein GBP346_A0362 [Burkholderia pseudomallei
MSHR346]
gi|254181995|ref|ZP_04888592.1| putative lipoprotein [Burkholderia pseudomallei 1655]
gi|254259500|ref|ZP_04950554.1| putative lipoprotein [Burkholderia pseudomallei 1710a]
gi|76579037|gb|ABA48512.1| hypothetical protein BURPS1710b_0615 [Burkholderia pseudomallei
1710b]
gi|134248822|gb|EBA48904.1| putative lipoprotein [Burkholderia pseudomallei 305]
gi|184212533|gb|EDU09576.1| putative lipoprotein [Burkholderia pseudomallei 1655]
gi|225934237|gb|EEH30221.1| putative lipoprotein [Burkholderia pseudomallei Pakistan 9]
gi|237502964|gb|ACQ95282.1| conserved hypothetical protein [Burkholderia pseudomallei MSHR346]
gi|254218189|gb|EET07573.1| putative lipoprotein [Burkholderia pseudomallei 1710a]
Length = 212
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAAYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + + ++GQ+ F +
Sbjct: 122 ADDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARATLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 181 AAGGAQALATASDALVSQLVAW 202
>gi|257092690|ref|YP_003166331.1| putative lipoprotein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
gi|257045214|gb|ACV34402.1| putative lipoprotein [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 206
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/190 (15%), Positives = 69/190 (36%), Gaps = 16/190 (8%)
Query: 17 SLAVLLCTSLSSCFFHNN---PVNIYDL--TESTKYDESVQRHIQLIITEPITEKILNSE 71
L + L++C P ++YD D ++ L + P L E
Sbjct: 4 LLMAFVACLLAACAGGARKAPPADVYDFGMPVQHLADVGHWSNLALEVKVPYWFDSLAIE 63
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
++ P++++ GS+W+ ++ +L VV + +
Sbjct: 64 YRLLYDDPLKLRSYAGSRWAGAPGLLLAQRLRQQI-------GVVGSGGQTATNCLLRLE 116
Query: 132 IRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
++ F D ++ ++++ + +VG++ VEE + + +L RA
Sbjct: 117 LQEFSQVFDTPLQSRGLLRGQASLLDSR-HRIVGERRVAVEEPAAGVDARGGVNALVRAS 175
Query: 189 SRISSEIIDW 198
++ E+ W
Sbjct: 176 DALAGELAAW 185
>gi|56551911|ref|YP_162750.1| hypothetical protein ZMO1015 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761773|ref|ZP_04759859.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|260752533|ref|YP_003225426.1| hypothetical protein Za10_0290 [Zymomonas mobilis subsp. mobilis
NCIMB 11163]
gi|56543485|gb|AAV89639.1| protein of unknown function DUF330 [Zymomonas mobilis subsp.
mobilis ZM4]
gi|241373687|gb|EER63247.1| conserved hypothetical protein [Zymomonas mobilis subsp. mobilis
ATCC 10988]
gi|258551896|gb|ACV74842.1| protein of unknown function DUF330 [Zymomonas mobilis subsp.
mobilis NCIMB 11163]
Length = 208
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 68/179 (37%), Gaps = 3/179 (1%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE 81
C +L + N + + + Q L++ P L I V +SP
Sbjct: 20 GCVNLGNNKPPKNLLTLTSSAAPAANSDLTQNKPLLLVVPPAVPAELKVTRIPVTTSPTT 79
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
+ YL W D R+ L ++ VV A Y + + +F ++
Sbjct: 80 VAYLTDGVWVDLPSRLFSNILSTTIASHNHFM-VVNYRAATGAAYHLTGNLTAFGLDAAH 138
Query: 142 HCAIITMSLKIINAHDNS--LVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
H +++ + + D+ V + F + + +K + + +LN A ++++ ++ DW
Sbjct: 139 HQIVVSYDAFLRGSKDHRTETVTSRHFEIRQPAQKQDAVSVANNLNTAANQMAGQVADW 197
>gi|329851289|ref|ZP_08266046.1| hypothetical protein ABI_41300 [Asticcacaulis biprosthecum C19]
gi|328840135|gb|EGF89707.1| hypothetical protein ABI_41300 [Asticcacaulis biprosthecum C19]
Length = 225
Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 32/209 (15%), Positives = 80/209 (38%), Gaps = 13/209 (6%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL-------TESTKYDESVQRHIQLIIT 60
+ + + ++ TS S +PV +Y + + V + L
Sbjct: 1 MKRFLLPVLAVTAFGLTSCISLLPKTDPVQMYRFGFDAGLVESALAQQQGVPVSLSL--- 57
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
P+ ++ D I+ E+ Y+ ++W+ + + A + +G + +
Sbjct: 58 GPVVFPPGSAGDGIMTVENNEVAYVEKARWAAGARELFTEAVQAGYARSGGNVRLDPRGR 117
Query: 121 GIYADYQIISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
A Y++ A+R FE + + + +I D ++V K E + +++
Sbjct: 118 SAAA-YRLDIAVRGFETRYVRGKPVVSVALDARITRQSDRTVVASKYITREAPVRRNDMS 176
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSLPLSD 207
++S N+A + ++I ++ ++L
Sbjct: 177 LTVESYNQAVTEAVGDLIGFSQATLSPMA 205
>gi|144898321|emb|CAM75185.1| ABC-type uncharacterized transport system, auxiliary component
[Magnetospirillum gryphiswaldense MSR-1]
Length = 194
Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/159 (18%), Positives = 64/159 (40%), Gaps = 2/159 (1%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVN-IYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDI 73
SL L +L++C P + Y L T + + ++ P T+ +L+ +
Sbjct: 4 LSLIAALAVTLAACAQQAPPKDRFYRLETPPVAARFAAPSLGVIEVSRPTTDGVLSERPL 63
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ + W++ ++Q L+ + +G TV+ P + D+ I +
Sbjct: 64 AYQDGDGTLGRYRYDLWAEPPTALLQNALVDSLRLSGISHTVITPETRVPPDWMIRGRLN 123
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKL 172
FE+ + + L ++++ D SL+ K + VE
Sbjct: 124 RFEMLAGAGKVVANVELAVVSSRDGSLLLLKTYQVEVPS 162
>gi|167736874|ref|ZP_02409648.1| putative lipoprotein [Burkholderia pseudomallei 14]
Length = 201
Score = 79.2 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 71/201 (35%), Gaps = 9/201 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAVYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ ++ + ++GQ+ F +
Sbjct: 122 GDDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARVTLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIID 197
Q+L A + S+++
Sbjct: 181 AAGGAQALATASDALVSQLVA 201
>gi|53718044|ref|YP_107030.1| putative lipoprotein [Burkholderia pseudomallei K96243]
gi|52208458|emb|CAH34392.1| putative lipoprotein [Burkholderia pseudomallei K96243]
Length = 207
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 32/202 (15%), Positives = 71/202 (35%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 1 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 59
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 60 DVSAPDALNTDRFVYRLAYSDAQRIAAYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 116
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + + ++GQ+ F +
Sbjct: 117 ADDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARATLTQEGKVLGQRTFVSRAPASTPD 175
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 176 AAGGAQALATASDALVSQLVAW 197
>gi|325982946|ref|YP_004295348.1| hypothetical protein NAL212_2365 [Nitrosomonas sp. AL212]
gi|325532465|gb|ADZ27186.1| protein of unknown function DUF330 [Nitrosomonas sp. AL212]
Length = 208
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 30/196 (15%), Positives = 72/196 (36%), Gaps = 21/196 (10%)
Query: 25 SLSSCFFHNNPVNIYD-----LTESTKYDESVQRHI-QLIITEPITEKILNSEDIIVRS- 77
S + ++ Y L+ + H L+I + L++ I R
Sbjct: 16 SCTGLHKRQPAISTYTFGMQHLSPIEQIPNQPYLHRKSLLIADAAAPSWLDNTAIHYRLI 75
Query: 78 --SPIEIQYLIGSQWSDKLPRMI----QLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
+P + S+W ++ + +++ V++ + + ADY +
Sbjct: 76 YHNPAQSYTYANSRWISTPATLLTQQIRHRIV-----TSTPEQVIRDSGIVKADYTLHIE 130
Query: 132 IRSFEI---NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ F D ++++ + +I + L QK F E + + +L+ A
Sbjct: 131 LNEFIQLFDTTDSSHVVVSIRVSLIEHNSRKLFAQKDFSTIESTPSADAAGAVFALSSAS 190
Query: 189 SRISSEIIDWTLSSLP 204
+++ +E+++W LP
Sbjct: 191 NKLINELVNWLTVELP 206
>gi|83720907|ref|YP_440934.1| hypothetical protein BTH_I0376 [Burkholderia thailandensis E264]
gi|83654732|gb|ABC38795.1| hypothetical protein BTH_I0376 [Burkholderia thailandensis E264]
Length = 210
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 9/193 (4%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILN 69
+ + L S + YDL S L + + LN
Sbjct: 13 RGRAALALAVALAIASGCAGTPAALTNIRYDLGPVRPAASSGTGP-ALKVLDVSAPDALN 71
Query: 70 SEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
++ + R I S+W+ +++ +L +G+ V++ + G+ A
Sbjct: 72 TDRFVYRLAYADAQRISVYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLEGDDGVRAPV 128
Query: 127 QIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ + FE D + ++ + D ++GQ+ F + Q+L
Sbjct: 129 -LKVELSEFEQVFDGRSQSHAAVTARATLTQDGKVLGQRTFVSRAPASTPDAAGGAQALA 187
Query: 186 RAFSRISSEIIDW 198
A ++++ W
Sbjct: 188 TASDEFVAQLVAW 200
>gi|114330426|ref|YP_746648.1| putative lipoprotein [Nitrosomonas eutropha C91]
gi|114307440|gb|ABI58683.1| putative lipoprotein [Nitrosomonas eutropha C91]
Length = 200
Score = 77.7 bits (190), Expect = 8e-13, Method: Composition-based stats.
Identities = 26/190 (13%), Positives = 62/190 (32%), Gaps = 14/190 (7%)
Query: 20 VLLCTSLSSCFFHNNP---VNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDII 74
LL L+ C V++YDL + Q + I + L+++ I
Sbjct: 8 ALLAILLTGCTLTPKAPSSVSVYDLGPPSAITLGSSLSSQATIQIIDIAAPVWLDTQSIH 67
Query: 75 VRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
R P I S+W+ ++ + F G I K + + +Y +
Sbjct: 68 YRLAYHDPARIYTYADSRWNAPPAELLTERFRQYF-ATGNIDRHHKDDTPV--NYLLKID 124
Query: 132 IRSFEI---NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ F ++ + + + + F ++ + + + + +
Sbjct: 125 LGEFTQIFNTPGNSQVVVQLRASLYEPTSRLPIAHQHFLGRQETQTADAAGAVTAFIQVS 184
Query: 189 SRISSEIIDW 198
+ +E++ W
Sbjct: 185 DNLLNELVQW 194
>gi|167561349|ref|ZP_02354265.1| hypothetical protein BoklE_02229 [Burkholderia oklahomensis EO147]
gi|167568581|ref|ZP_02361455.1| hypothetical protein BoklC_01974 [Burkholderia oklahomensis C6786]
Length = 212
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/202 (13%), Positives = 64/202 (31%), Gaps = 9/202 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + + + + + + YDL + + L +
Sbjct: 6 MSGPFFRRSRPALALAVALAIAGLNGCAGTPAALSNIRYDLGPAQPSASAGAGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LNS+ + R I S+W+ +++ +L G V++
Sbjct: 65 DVSAPDALNSDRFVYRLAYADAQRIAMYRDSKWTAPPAQLLTQRLRGALSRRG---AVLE 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 122 GEDSVRAPV-LKVELSEFEQVFDGRSQSHAAVTARATLTQDGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDW 198
Q+L A + S+++ W
Sbjct: 181 AAGGAQALATASDELVSQLVAW 202
>gi|197105494|ref|YP_002130871.1| hypothetical protein PHZ_c2031 [Phenylobacterium zucineum HLK1]
gi|196478914|gb|ACG78442.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1]
Length = 211
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 56/144 (38%), Gaps = 8/144 (5%)
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+ I+ + ++ Y+ ++W + + A F+ + ++ + A Y +
Sbjct: 71 AGDRIL-TVTGGKVAYIAETRWVAPASTLFNQAVTAAFDASPGPVRLIPRGEPAPAQYVL 129
Query: 129 ISAIRSFEINIDRHC-----AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
+R+FE + DR ++ + + + S ++F + + + +++
Sbjct: 130 RLDVRNFETHYDRGGKAAPMVLVRVRAALARGGEGST--DRLFEAQVRASGNRVSSIVEA 187
Query: 184 LNRAFSRISSEIIDWTLSSLPLSD 207
+ A + + EI WT + +
Sbjct: 188 YDEAVAEVLGEITAWTNGQVSPAA 211
>gi|87200855|ref|YP_498112.1| hypothetical protein Saro_2842 [Novosphingobium aromaticivorans DSM
12444]
gi|87136536|gb|ABD27278.1| conserved hypothetical protein [Novosphingobium aromaticivorans DSM
12444]
Length = 190
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 53/145 (36%), Gaps = 5/145 (3%)
Query: 56 QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
L++ EP E+ L + V+ + YL + W ++ R+ Q L G + +
Sbjct: 51 ALVVLEPTAEQRLAVTRVPVQIDDANVAYLKKTMWVERPSRLFQRLLAETIRARG--NRL 108
Query: 116 VKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175
V N + Q+ + + A++ I + + F +
Sbjct: 109 VIENDPGASGTQLSGRLLDMGYDARTRMAVVRYDA--IRETAGRVE-TRRFESTVPVTDA 165
Query: 176 NKLHFIQSLNRAFSRISSEIIDWTL 200
+ +LN A + ++S++ DW
Sbjct: 166 EAKYVGPALNEAANAVASQVADWVA 190
>gi|303256380|ref|ZP_07342394.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
gi|302859871|gb|EFL82948.1| conserved hypothetical protein [Burkholderiales bacterium 1_1_47]
Length = 201
Score = 76.9 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 62/176 (35%), Gaps = 5/176 (2%)
Query: 27 SSCFFHNNPVNIYDLTE---STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
S P+ +Y L + +R + I P+ +S V + I
Sbjct: 17 CSILPERPPLKLYTLLANLNTQDCRAPKRRLSSVRINSPMIASPYDSTRCYVLTKDNRIY 76
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+++S +I L ++ G + V+ PN YQ+ + F IN +
Sbjct: 77 NTDINRFSSNPGNLIGDGLREVIQDCGPWNVVLSPNSISTPAYQLTVFVSKFFINAVKKP 136
Query: 144 --AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
A++ M + ++ + LV + + + D+ + + + I + +
Sbjct: 137 FAAVVEMEVSVVASVSGKLVFHETYSQTQNTPTDDMPGAVSAFDVCLENIFKTLTN 192
>gi|315635508|ref|ZP_07890774.1| conserved hypothetical protein [Arcobacter butzleri JV22]
gi|315480266|gb|EFU70933.1| conserved hypothetical protein [Arcobacter butzleri JV22]
Length = 192
Score = 76.5 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/186 (18%), Positives = 73/186 (39%), Gaps = 6/186 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNI--YDLTESTKYDESVQRHIQLIITEPITEKILNSEDI 73
L + + + C F ++I Y + T+ + + I EP + N I
Sbjct: 4 SILILTIFLLFTGCTFKQQRIDINHYSIDFKTQKISQNAKLSSIFIEEPNVNRSFNLTSI 63
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ P + ++W + MI +LI +F + S V+ + I Y + + I
Sbjct: 64 YYNTKPYLFEEYAKNKWINLPSNMIYNQLIDSFIASNIFSNVISKDSKIEHRYTLRTDII 123
Query: 134 SF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
E D+ AI+ + +I D ++ F E ++ F+++LN+
Sbjct: 124 KLYHEFKEDKSYAILKIKFDLI--EDKKVIKTISFDKNVLCETNDAYGFVKALNKGLEES 181
Query: 192 SSEIID 197
++ +++
Sbjct: 182 TNSLLN 187
>gi|167579647|ref|ZP_02372521.1| hypothetical protein BthaT_15964 [Burkholderia thailandensis TXDOH]
gi|167617725|ref|ZP_02386356.1| hypothetical protein BthaB_15559 [Burkholderia thailandensis Bt4]
gi|257140411|ref|ZP_05588673.1| hypothetical protein BthaA_14575 [Burkholderia thailandensis E264]
Length = 201
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/193 (15%), Positives = 64/193 (33%), Gaps = 9/193 (4%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILN 69
+ + L S + YDL S L + + LN
Sbjct: 4 RGRAALALAVALAIASGCAGTPAALTNIRYDLGPVRPAASSGTGP-ALKVLDVSAPDALN 62
Query: 70 SEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
++ + R I S+W+ +++ +L +G+ V++ + G+ A
Sbjct: 63 TDRFVYRLAYADAQRISVYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLEGDDGVRAPV 119
Query: 127 QIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ + FE D + ++ + D ++GQ+ F + Q+L
Sbjct: 120 -LKVELSEFEQVFDGRSQSHAAVTARATLTQDGKVLGQRTFVSRAPASTPDAAGGAQALA 178
Query: 186 RAFSRISSEIIDW 198
A ++++ W
Sbjct: 179 TASDEFVAQLVAW 191
>gi|83748497|ref|ZP_00945518.1| Transcriptional regulator [Ralstonia solanacearum UW551]
gi|207742157|ref|YP_002258549.1| cog3218, abc-type uncharacterized transport system, auxiliary
component protein [Ralstonia solanacearum IPO1609]
gi|83724801|gb|EAP71958.1| Transcriptional regulator [Ralstonia solanacearum UW551]
gi|206593545|emb|CAQ60472.1| cog3218, abc-type uncharacterized transport system, auxiliary
component protein [Ralstonia solanacearum IPO1609]
Length = 211
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 71/208 (34%), Gaps = 15/208 (7%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCF-FHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK 66
+I + + +L + L+ C + P +YD + + L +TE +
Sbjct: 2 LILQTVFRRALVLSAVAVLAGCSSTPSAPTAVYDFGLAPAAVGGPRLPTALRVTEVVGPG 61
Query: 67 ILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
++ I R + S+W + + +L G++ P
Sbjct: 62 WMDGSAIYYRLAYAQGQRTELYANSRWVESPVNLFDARLRNAVAARGQVVGYGLPEVP-- 119
Query: 124 ADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ + F DR A ++ + + A LV Q+V + +
Sbjct: 120 ---TLRIELVDFSQVFDRPDASRGVVRLRASVFMARG--LVAQRVVQADVPAPSADAAGG 174
Query: 181 IQSLNRAFSRISSEIIDWTLS-SLPLSD 207
+ +L +A R E++DW SLP +
Sbjct: 175 VSALAQASDRAIGEVLDWVAGLSLPAAA 202
>gi|103485971|ref|YP_615532.1| hypothetical protein Sala_0478 [Sphingopyxis alaskensis RB2256]
gi|98976048|gb|ABF52199.1| conserved hypothetical protein [Sphingopyxis alaskensis RB2256]
Length = 199
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/142 (19%), Positives = 60/142 (42%), Gaps = 4/142 (2%)
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP 118
I P + L + I V+ I Y+ +QW + R+ Q +L++ V+
Sbjct: 57 ILIPTAPQKLRTTRIPVQQDDASIAYVQDAQWVEAPQRLFQ-RLVSETVAARTSRVVLDE 115
Query: 119 NQGIYAD-YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNK 177
Q + A Q+ + F ++ + A++ ++ + V Q+ F E + +
Sbjct: 116 GQYLTAPGEQLAGQLMEFGVDARSNEALVVYQAMLV-SAGGKTVTQRRFETREPIGGKVE 174
Query: 178 LHFI-QSLNRAFSRISSEIIDW 198
+ ++L RA +R++ ++ W
Sbjct: 175 AKPVGEALTRAANRVALDVAAW 196
>gi|198283900|ref|YP_002220221.1| hypothetical protein Lferr_1793 [Acidithiobacillus ferrooxidans
ATCC 53993]
gi|218668139|ref|YP_002426534.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198248421|gb|ACH84014.1| conserved hypothetical protein [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218520352|gb|ACK80938.1| lipoprotein, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 221
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 65/187 (34%), Gaps = 11/187 (5%)
Query: 27 SSCFFHNNPVNIYDLTESTKYDESVQRHIQ-----LIITEPITEKILNSEDI---IVRSS 78
+ C + YD+T + L + + L +++ ++
Sbjct: 25 TGCATSVSWQAPYDITPPHPAPLASTTRSTATLPVLRLGPVSAVQWLETDNYQYHLLYQD 84
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEIN 138
+ ++W P+MI +L E +G+ V+ P + + + + F +N
Sbjct: 85 QQRLLAYRDARWIGTPPQMIASRLQRQLEESGQWRAVLTPLSRGRSVWLLQVRLTDFVVN 144
Query: 139 IDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A++ + ++ D ++ Q+ F E L + +++ A SR I
Sbjct: 145 FSGPDAGAALVAGTATLVKTADYQVIAQRHFSFTEMLPSASAQGGAKAMATASSRFVRAI 204
Query: 196 IDWTLSS 202
W +
Sbjct: 205 SSWAAQT 211
>gi|207727756|ref|YP_002256150.1| cog3218, abc-type uncharacterized transport system, auxiliary
component protein [Ralstonia solanacearum MolK2]
gi|206590997|emb|CAQ56609.1| cog3218, abc-type uncharacterized transport system, auxiliary
component protein [Ralstonia solanacearum MolK2]
Length = 211
Score = 75.0 bits (183), Expect = 5e-12, Method: Composition-based stats.
Identities = 34/208 (16%), Positives = 71/208 (34%), Gaps = 15/208 (7%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCF-FHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK 66
+I + + +L + L++C + P +YD + + L + E +
Sbjct: 2 LILQTVFRRALVLSAVAVLAACSSTPSAPSAVYDFGLAPAAVGGPRLPTALRVAEVVGPG 61
Query: 67 ILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
++ I R + S+W + + +L G++ P
Sbjct: 62 WMDGSAIYYRLAYAQGQRTELYANSRWVESPVNLFDARLRNAVAARGQVVGYGLPEVP-- 119
Query: 124 ADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ + F DR A ++ + + A LV Q+V + +
Sbjct: 120 ---TLRIELVDFSQVFDRPDASRGVVRLRASVFMARG--LVAQRVVQADVPAPSADAAGG 174
Query: 181 IQSLNRAFSRISSEIIDWTLS-SLPLSD 207
+ +L +A R E++DW SLP +
Sbjct: 175 VSALAQASDRAIGEVLDWVAGLSLPAAA 202
>gi|254292869|ref|YP_003058892.1| hypothetical protein Hbal_0493 [Hirschia baltica ATCC 49814]
gi|254041400|gb|ACT58195.1| hypothetical protein Hbal_0493 [Hirschia baltica ATCC 49814]
Length = 255
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 70/190 (36%), Gaps = 2/190 (1%)
Query: 13 IISCSLAVLLCTSLSSCFFHNN-PVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
++ L + S P + L S S + +++ P ++
Sbjct: 11 VLPLILVGMGLGGCVSVLPEPKQPDALVRLPTSGMRGASSPLNTNIVVHIPDAMGAISGA 70
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
+I S IQY+ +W+D R+ Q ++ + V G +Y + +
Sbjct: 71 EIA-ASDNQRIQYINDVRWADSPARLFQAAVVDALTVSEGDGLAVPVQVGARGEYDLRLS 129
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
I ++ ++ A+ + + + + D S++ V E LE + ++L RA S
Sbjct: 130 ILDLTVDNEKEEAVCKVRVVLTRSGDKSIIASDVLQAVELLENKKSVDRAEALARAISNA 189
Query: 192 SSEIIDWTLS 201
+ D+ +
Sbjct: 190 AEITADFVAT 199
>gi|157736376|ref|YP_001489059.1| hypothetical protein Abu_0105 [Arcobacter butzleri RM4018]
gi|157698230|gb|ABV66390.1| hypothetical protein Abu_0105 [Arcobacter butzleri RM4018]
Length = 192
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 72/186 (38%), Gaps = 6/186 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNI--YDLTESTKYDESVQRHIQLIITEPITEKILNSEDI 73
L + + + C F ++I Y + T+ + + I EP + N I
Sbjct: 4 SILILTIFLLFTGCTFKQQRIDINHYSIDFKTQKISQNAKLSSIFIEEPNVNRSFNLTSI 63
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ P + ++W + MI +LI +F + S V+ + I Y + + I
Sbjct: 64 YYNTKPYLFEEYAKNKWINLPSNMIYNQLIDSFIASNIFSNVISKDSKIEHKYTLKTDII 123
Query: 134 SF--EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
E D+ AI+ + +I D ++ F ++ F+++LN+
Sbjct: 124 KLYHEFKEDKSYAILKIKFDLI--EDKKVIKTISFDKNVLCVTNDAYGFVKALNKGLEES 181
Query: 192 SSEIID 197
++ +++
Sbjct: 182 TNSLLN 187
>gi|158521031|ref|YP_001528901.1| ABC-type transport system auxiliary component-like protein
[Desulfococcus oleovorans Hxd3]
gi|158509857|gb|ABW66824.1| ABC-type transport system auxiliary component-like protein
[Desulfococcus oleovorans Hxd3]
Length = 215
Score = 74.2 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 31/189 (16%), Positives = 67/189 (35%), Gaps = 6/189 (3%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES-VQRHIQLIITEPITEKILNSEDI 73
+ +L C +LSS Y L + + + + + +
Sbjct: 16 ALTLVAAGCINLSSLTQPPIQTAYYILEYDPPAPTGSKPSAPAIRVDRFSADPLYATTAM 75
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
I + P + + +W M+ L + +G + V P A Y I +
Sbjct: 76 IYKKQPFQTDAYVYHRWHTAPADMVSHLLARDLRRSGNFAAVFGPAAPASAAYDIKGHVE 135
Query: 134 SF--EINIDRHCAIITMSLKII---NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
F D A + +++ + ++++V QK + +++ F ++++RA
Sbjct: 136 IFLENDTADPWQAELLLTVTVTGPPGTGNSAVVLQKSYQASAPCVRNHPRAFAEAMSRAM 195
Query: 189 SRISSEIID 197
+S EII
Sbjct: 196 QLLSEEIIA 204
>gi|78067709|ref|YP_370478.1| ABC-type uncharacterized transport system auxiliary component-like
[Burkholderia sp. 383]
gi|77968454|gb|ABB09834.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia sp. 383]
Length = 207
Score = 74.2 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 61/165 (36%), Gaps = 9/165 (5%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLP 95
YDL +T + L + + L+S+ R + S+W+
Sbjct: 39 YDLGPATSVVTAGPGP-ALKVLDVAAPDALDSDKFAYRLAYVDAQHVAVYRDSRWTAPPA 97
Query: 96 RMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIIN 154
+++ +L + G TV++ + G+ A + + FE D + ++ +
Sbjct: 98 QLLTQRLRGALSSRG---TVLEGSDGVRAP-TLKVDLNEFEQVFDGQSQSHGAVTARATL 153
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
D ++GQ+ F + ++L A ++ S+I W
Sbjct: 154 TLDGKVLGQRTFVARAPSSTPDAAGGARALATASDQLVSQIAAWV 198
>gi|83309428|ref|YP_419692.1| ABC transporter [Magnetospirillum magneticum AMB-1]
gi|82944269|dbj|BAE49133.1| ABC-type uncharacterized transport system [Magnetospirillum
magneticum AMB-1]
Length = 197
Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 56/156 (35%), Gaps = 3/156 (1%)
Query: 40 DLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV--RSSPIEIQYLIGSQWSDKLPRM 97
++ + L I + + +E + R+ + + WS+ +
Sbjct: 32 EVAAPAQRLPRPVLPGVLEINR-LASDGVAAERALAFSRTEGGALAHYKYDFWSEPPGLL 90
Query: 98 IQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHD 157
+Q +L G VV P + AD+ + +R FE DR A++ + L ++ A D
Sbjct: 91 LQDRLAHYLAAAGIADKVVTPELRVLADWVLRGKVRRFEQIADRAEAVVDLELAVVRARD 150
Query: 158 NSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
LV + + + ++ + + I
Sbjct: 151 GRLVLLETYTARVPVSSARVEDAALAMEKGVADIFG 186
>gi|300705332|ref|YP_003746935.1| hypothetical protein RCFBP_21175 [Ralstonia solanacearum CFBP2957]
gi|299072996|emb|CBJ44353.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 211
Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/208 (16%), Positives = 70/208 (33%), Gaps = 15/208 (7%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCF-FHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK 66
+I + L + +L +C + P +YD + + L +TE +
Sbjct: 2 LILPTVFRRVLVLSTVAALVACSSTPSAPSAVYDFGLAPAAVGGPRLLTALRVTEVVGPG 61
Query: 67 ILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
++ I R + S+W + + +L G++ P
Sbjct: 62 WMDGNAIYYRLAYAQGQRTELYANSRWVESPVNLFDARLRNAVAARGQVVGYGLPEVP-- 119
Query: 124 ADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ + F DR A ++ + + A LV Q+V + +
Sbjct: 120 ---TLRIELVDFSQVFDRPDASRGVVRLRASVFMARG--LVAQRVVQADVPAPSADAAGG 174
Query: 181 IQSLNRAFSRISSEIIDWTLS-SLPLSD 207
+ +L +A R E++DW SLP +
Sbjct: 175 VSALAQASDRAIGEVLDWVAGLSLPAAA 202
>gi|115352998|ref|YP_774837.1| ABC transporter auxiliary component-like protein [Burkholderia
ambifaria AMMD]
gi|115282986|gb|ABI88503.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia ambifaria AMMD]
Length = 238
Score = 73.8 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 73/203 (35%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ +L + + YDL + + L +
Sbjct: 32 MPRILDRALRPAATTLAILMLAFAAGCAGNGTALSNVRYDLGPAASVVTAGTGP-ALKVL 90
Query: 61 EPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ L+++ + R + S+W+ +++ +L + G V++
Sbjct: 91 DVAAPDALDTDKFVYRLTYADAQRTAVYRDSRWTAPPAQLLTQRLRGALSSRG---AVLE 147
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 148 GSDGVRAP-TLKVDLNEFEQVFDGESQSHGAVTARATLMQDGKVLGQRTFVARAPSSTPD 206
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 207 AAGGARALAAASDELVSQIAAWV 229
>gi|189351644|ref|YP_001947272.1| ABC-type uncharacterized transporter auxiliary component-like
protein [Burkholderia multivorans ATCC 17616]
gi|189335666|dbj|BAG44736.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia multivorans ATCC 17616]
Length = 212
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 71/203 (34%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ L+ + + YDL +T L +
Sbjct: 6 MSRLLDRALRPAATALAVLTLVLAAGCAADRAVLSNIRYDLGPATPVGTVGSGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ + +S+ + R + S+W +++ +L G V++
Sbjct: 65 DVSAPEAFDSDKFVYRLAYADAQRMAVYRDSRWIAPPAQLLTQRLRGALSARG---AVLE 121
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 122 GSDGVRAP-TLKVDLSEFEQVFDGQSQSHGAVTARATLMQDGKVLGQRTFVARAPSSTPD 180
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 181 AAGGARALAAASDELVSQIAAWV 203
>gi|30249904|ref|NP_841974.1| putative lipoprotein [Nitrosomonas europaea ATCC 19718]
gi|30180941|emb|CAD85867.1| putative lipoprotein [Nitrosomonas europaea ATCC 19718]
Length = 205
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 66/195 (33%), Gaps = 16/195 (8%)
Query: 19 AVLLCTSLSSCFFHNN---PVNIYDLTESTKYDESVQRHIQ---LIITEPITEKILNSED 72
AV L L+ C PV+IYDL +T + + + + + L+++
Sbjct: 6 AVFLAVLLTGCTLTPKTLAPVSIYDLGPATSVTVTDSSRLSQAIIQVMDVTAPVWLDTQS 65
Query: 73 IIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP---NQGIYADY 126
I R P I GS+W+ +++ + F + I + + A Y
Sbjct: 66 IHYRLAYHDPARIYAYAGSRWAAPPAKLLTERFRQYF-ASHAIDSQKDDKNKESHVPAHY 124
Query: 127 QIISAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
+ + F II + + + V Q+ F E + + + +
Sbjct: 125 LLKIELGEFTQIFHAQNDSRIIIRLRASLYEPNTRLPVAQRSFTGERPAQTADAAGAVAA 184
Query: 184 LNRAFSRISSEIIDW 198
+ E++ W
Sbjct: 185 FILVSDNLLDELVQW 199
>gi|301057222|ref|ZP_07198351.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300448673|gb|EFK12309.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 211
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/194 (14%), Positives = 67/194 (34%), Gaps = 8/194 (4%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNP-VNIYDLT-ESTKYDESVQRHIQLIITEPITEKILN 69
K++ L S P ++ Y L K + + +
Sbjct: 6 KLLLVVFCALFLGGGCSALKKPKPKIDYYTLEYTVPKIAGLKPIDKVIRVDRFGVAPAYD 65
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
S +I + + + +W L + ++G V + A Y +
Sbjct: 66 SNRMIFQDQSFKQDEYVYFKWIANPGSFATYFLARDLRDSGLFKAVFTYKSHMAASYALE 125
Query: 130 SAIRS-FEINIDRHC-AIITMSLKII----NAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
++ FE++ + A++ MS+ ++ ++ QK + K +++ ++
Sbjct: 126 GSVDEFFELDTPKGWDAVLGMSVTLVVIGEPDVSKRILFQKSYRARRKCGEEHPRGLAEA 185
Query: 184 LNRAFSRISSEIID 197
++ A +SS+II
Sbjct: 186 MSEAMGEVSSKIIR 199
>gi|161523586|ref|YP_001578598.1| ABC transporter auxiliary component-like protein [Burkholderia
multivorans ATCC 17616]
gi|160341015|gb|ABX14101.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia multivorans ATCC 17616]
Length = 207
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 71/203 (34%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ L+ + + YDL +T L +
Sbjct: 1 MSRLLDRALRPAATALAVLTLVLAAGCAADRAVLSNIRYDLGPATPVGTVGSGP-ALKVL 59
Query: 61 EPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ + +S+ + R + S+W +++ +L G V++
Sbjct: 60 DVSAPEAFDSDKFVYRLAYADAQRMAVYRDSRWIAPPAQLLTQRLRGALSARG---AVLE 116
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 117 GSDGVRAP-TLKVDLSEFEQVFDGQSQSHGAVTARATLMQDGKVLGQRTFVARAPSSTPD 175
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 176 AAGGARALAAASDELVSQIAAWV 198
>gi|78777722|ref|YP_394037.1| hypothetical protein Suden_1525 [Sulfurimonas denitrificans DSM
1251]
gi|78498262|gb|ABB44802.1| hypothetical protein Suden_1525 [Sulfurimonas denitrificans DSM
1251]
Length = 198
Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 32/187 (17%), Positives = 70/187 (37%), Gaps = 4/187 (2%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
+ + L ++ H + + K S R L I++ + L S D+
Sbjct: 6 ALITIFLFVGCTTIKPHVSEFRVITKDTQIKSSASGCRDKSLKISQAFSTPSLLSLDMDY 65
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
S +I SQW + I +L + ++ +V + ++Y + I F
Sbjct: 66 TESDNKIFSYSQSQWQESPNSSITSELFKSIRDSDIFKSVHSFKSRVKSEYILEIDIEEF 125
Query: 136 EINIDRH----CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
++ I ++L +++A N+ + F + + + ++L+ A I
Sbjct: 126 MQFYTKNMSSSHVNIVVNLSLVDAKTNNTLSTNKFTSKVDAKTADASGGAEALSIALDEI 185
Query: 192 SSEIIDW 198
S+ I+W
Sbjct: 186 ISKNIEW 192
>gi|299068158|emb|CBJ39377.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 214
Score = 71.5 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 68/207 (32%), Gaps = 14/207 (6%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
+ ++++ S L + P +YD + + L +TE +
Sbjct: 6 TVLRRVLVLSALAALSALAACSSTPTAPAAVYDFGLAPAAVGGPRLPTALRVTEVVGPGW 65
Query: 68 LNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
++ I R + S+W + + +L G++ P
Sbjct: 66 MDGNAIYYRLAYAQGQRTELYANSRWVESPVNLFDARLRNAVAARGQVVGYGLPEVP--- 122
Query: 125 DYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
+ + F DR A ++ + + A LV Q+V + + +
Sbjct: 123 --TLRVELVDFSQVFDRPDASHGVVRLRASVFLARG--LVAQRVVQADVPAPSADAAGGV 178
Query: 182 QSLNRAFSRISSEIIDWTLS-SLPLSD 207
+L +A R E++DW +LP S
Sbjct: 179 SALAQASDRAIGEVLDWVAGLALPASA 205
>gi|254251299|ref|ZP_04944617.1| hypothetical protein BDAG_00480 [Burkholderia dolosa AUO158]
gi|124893908|gb|EAY67788.1| hypothetical protein BDAG_00480 [Burkholderia dolosa AUO158]
Length = 214
Score = 71.2 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 74/203 (36%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ L+ + + YDL + + L +
Sbjct: 8 MPRILDRALRPAATALAVLTLVLAAGCAADRAALSNIRYDLGPAAPVVSAGTGP-ALKVL 66
Query: 61 EPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ + L+++ + R + S+W+ +++ +L + G V++
Sbjct: 67 DVAAPEALDTDKFVYRLAYADAQRMAVYRDSRWTAPPAQLLTQRLRSALSARG---AVLE 123
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 124 GSDGVRAP-TLKVDLSEFEQVFDGESQSHGAVTARATLMQDGKVLGQRTFVARAPASTPD 182
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 183 AAGGARALAAASDELVSQIAAWI 205
>gi|73539804|ref|YP_294324.1| lipoprotein [Ralstonia eutropha JMP134]
gi|72117217|gb|AAZ59480.1| probable lipoprotein [Ralstonia eutropha JMP134]
Length = 208
Score = 71.2 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 64/187 (34%), Gaps = 16/187 (8%)
Query: 22 LCTSLSSCFF--HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVR--- 76
+ ++L C + PV YDL + +L I + + S + R
Sbjct: 23 IVSALPGCSLTRASAPVTTYDLGPPLSTQAAAGTLPKLRIAQTDGPTWMESNALYYRLQY 82
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
S +Q +W ++ +L G ++ + + + FE
Sbjct: 83 SQAQRMQSYATQRWVIPPTQLFDGRLREAVAARGALTWFGDTSVP-----ALKVDMLEFE 137
Query: 137 INIDRHC---AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
D ++ + + + + ++GQ+ F E + +++L A ++ +
Sbjct: 138 QVFDSATDSRGVVRVRATV---YQHGMIGQQTFTAREPAPSADGAGGVKALADATDKVIA 194
Query: 194 EIIDWTL 200
+++ W
Sbjct: 195 DMLAWAA 201
>gi|256828278|ref|YP_003157006.1| protein of unknown function DUF330 [Desulfomicrobium baculatum DSM
4028]
gi|256577454|gb|ACU88590.1| protein of unknown function DUF330 [Desulfomicrobium baculatum DSM
4028]
Length = 206
Score = 71.2 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 33/193 (17%), Positives = 71/193 (36%), Gaps = 9/193 (4%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNP---VNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
I + +L +L+ C V Y L + Q + + N+
Sbjct: 3 IRYLVPFILILTLAGCGAARTTAPDVRYYTLEYESPTPTGQQAKAVIALNRFGVAPEFNT 62
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
I+ R Q QW ++ L + + +G V +P + A +Q+
Sbjct: 63 GKIVYRDLSFGRQEYAYHQWRSAPQALVADYLRRDLQQSGLFLAVNQPGSSLSATHQLEG 122
Query: 131 AIRSF-EINI-DRHCAIITMSLKIINAHDN----SLVGQKVFHVEEKLEKDNKLHFIQSL 184
+ + E++ DR A ++++ +I+ ++ Q+ + E K N ++++
Sbjct: 123 MVEEWMEVDGEDRWLATASLTITLIDLRARAIPEQVLFQRTYRGSEPAAKKNPGSVVEAM 182
Query: 185 NRAFSRISSEIID 197
+R +S II
Sbjct: 183 SRVMRTLSGRIIA 195
>gi|94309014|ref|YP_582224.1| hypothetical protein Rmet_0069 [Cupriavidus metallidurans CH34]
gi|93352866|gb|ABF06955.1| putative lipoprotein [Cupriavidus metallidurans CH34]
Length = 215
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/205 (17%), Positives = 72/205 (35%), Gaps = 16/205 (7%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEK 66
I + +L +L+ S S P YD + + +L IT+
Sbjct: 2 TIASALRFTALGLLIALSGCSVLSSQPPSTTYDFGPLAAAPSQPPAPLPKLRITQTDGPV 61
Query: 67 ILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
++ I R + +Q +W D + +L G +S
Sbjct: 62 WMDGSGIYYRLQYTQAQRLQAYSTQRWVDSPQHLFNDRLRDAVAARGPLSWSGDTTIP-- 119
Query: 124 ADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ + +FE D + ++ + + L+GQK F E+ +
Sbjct: 120 ---ALKVDLLAFEQVFDSPTSSRGVVRARATVYHKG---LIGQKTFVAEQPAPSADGQGG 173
Query: 181 IQSLNRAFSRISSEIIDWTLSSLPL 205
+++L+ + + I+DWT ++LPL
Sbjct: 174 VKALSAGVDAVIAAILDWT-ATLPL 197
>gi|293602526|ref|ZP_06684972.1| hypothetical protein HMPREF0004_0548 [Achromobacter piechaudii ATCC
43553]
gi|292819288|gb|EFF78323.1| hypothetical protein HMPREF0004_0548 [Achromobacter piechaudii ATCC
43553]
Length = 233
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/192 (10%), Positives = 69/192 (35%), Gaps = 6/192 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+++ ++ +L + + P +++DL K ++ + + ++ +
Sbjct: 3 MRRAVLILTLTITSALAGCGIGRVGTPPSVFDLGLDAKPVPALPARVPIAMSLQAPPALS 62
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
++ I + +W+ +++ +L G V+ + Q+
Sbjct: 63 DTSMIWRVGDSAAPRAYATFRWASSPSELVRQRLTDRLSRQGP---VLADRINLQMP-QL 118
Query: 129 ISAIRSFEINI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
++ FE + + + L+ + + ++V QK V+ + + +L +
Sbjct: 119 QLSLMQFEQVYADNGQTSEGRLLLQAVLLNGRAVVAQKRIQVQTPAPTQDAAGGVAALRQ 178
Query: 187 AFSRISSEIIDW 198
A + ++ W
Sbjct: 179 ATDEAADQLAKW 190
>gi|167717855|ref|ZP_02401091.1| putative lipoprotein [Burkholderia pseudomallei DM98]
Length = 214
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 62/185 (33%), Gaps = 9/185 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAAYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ ++ + ++GQ+ F +
Sbjct: 122 ADDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARVTLTQEGKVLGQRTFVSRAPASTPD 180
Query: 177 KLHFI 181
Sbjct: 181 LAGLA 185
>gi|221199883|ref|ZP_03572926.1| ABC-type transporter, auxiliary component [Burkholderia multivorans
CGD2M]
gi|221207449|ref|ZP_03580458.1| ABC-type transporter, auxiliary component [Burkholderia multivorans
CGD2]
gi|221172652|gb|EEE05090.1| ABC-type transporter, auxiliary component [Burkholderia multivorans
CGD2]
gi|221180122|gb|EEE12526.1| ABC-type transporter, auxiliary component [Burkholderia multivorans
CGD2M]
Length = 207
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 71/203 (34%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ L+ + + YDL +T L +
Sbjct: 1 MSRLLDRALRPAATALAVLTLVLAAGCAADRAALSNIRYDLGPATPVGTVGSGP-ALKVL 59
Query: 61 EPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ + +S+ + R + S+W +++ +L G V++
Sbjct: 60 DVSAPEAFDSDKFVYRLAYADAQRMAVYRDSRWIAPPAQLLTQRLRGALSARG---AVLE 116
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 117 GSDGVRAP-TLKVDLSEFEQVFDGQSQSHGAVTARATLMQDGKVLGQRTFVARAPSSTPD 175
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 176 AAGGARALAAASDELVSQIAAWV 198
>gi|221211091|ref|ZP_03584070.1| ABC-type transporter, auxiliary component [Burkholderia multivorans
CGD1]
gi|221168452|gb|EEE00920.1| ABC-type transporter, auxiliary component [Burkholderia multivorans
CGD1]
Length = 207
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 71/203 (34%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ L+ + + YDL +T L +
Sbjct: 1 MSRLLDRALRPAATALAVLTLVLAAGCAADRAALSNIRYDLGPATPVGSVGSGP-ALKVL 59
Query: 61 EPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ + +S+ + R + S+W +++ +L G V++
Sbjct: 60 DVSAPEAFDSDKFVYRLAYADAQRMAVYRDSRWIAPPAQLLTQRLRGALSARG---AVLE 116
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 117 GSDGVRAP-TLKVDLSEFEQVFDGQSQSHGAVTARATLMQDGKVLGQRTFVARAPSSTPD 175
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 176 AAGGARALAAASDELVSQIAAWV 198
>gi|91781624|ref|YP_556830.1| hypothetical protein Bxe_A4222 [Burkholderia xenovorans LB400]
gi|91685578|gb|ABE28778.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
Length = 208
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/206 (16%), Positives = 74/206 (35%), Gaps = 16/206 (7%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNI----YDLTESTKYDESVQRHIQ 56
M + +++++ S +LAVLL + + P I YD +
Sbjct: 1 MSRSIHRLLSS---SAALAVLLAFGVLATGCAGTPAAISDIRYDFGPPAPAASAGTSP-A 56
Query: 57 LIITEPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIS 113
+ + + +L S+ ++ R S + S W+ +++ +L + G
Sbjct: 57 VKVLDVTAPDVLESDKLMYRLSYADAQQTASYANSHWTMTPSQLLTQRLRGALSSRG--- 113
Query: 114 TVVKPNQGIYADYQIISAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKL 172
TV+ G+ A + + FE D + ++ + ++GQ+ F
Sbjct: 114 TVLTGADGVSAPV-LKVELSEFEQVFDSQSKSHAAVTARATLTQGGKVLGQRTFIARAPS 172
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDW 198
+ Q+L A + ++I W
Sbjct: 173 SSGDAAGGAQALATASDDLVAQIGAW 198
>gi|302342026|ref|YP_003806555.1| hypothetical protein Deba_0589 [Desulfarculus baarsii DSM 2075]
gi|301638639|gb|ADK83961.1| protein of unknown function DUF330 [Desulfarculus baarsii DSM 2075]
Length = 211
Score = 69.6 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 53/146 (36%), Gaps = 5/146 (3%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L I +P +I RS P + Q ++W M+ L+ +F+ +G V
Sbjct: 53 LAINDPTAAAGYIDTAMIFRSGPYQRQSYNYNRWRVTPAEMVGDFLLRDFQASGLFEAVF 112
Query: 117 KPNQGIYADYQIISAIRSFEIN-IDRHCAIITMSLKIINAHDN----SLVGQKVFHVEEK 171
A + + + + I + + + + +V QK + V +
Sbjct: 113 DSQDDANARFFLDIGVEDLLADRAGGGQLEIALLATLTDIEHSRLPLRVVFQKRYAVAQP 172
Query: 172 LEKDNKLHFIQSLNRAFSRISSEIID 197
+ D+ ++ ++A +S +I
Sbjct: 173 MAGDSPKEMARAASQAMEALSRRLIG 198
>gi|171322067|ref|ZP_02910939.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia ambifaria MEX-5]
gi|171092629|gb|EDT37933.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia ambifaria MEX-5]
Length = 207
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 73/203 (35%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ +L + + YDL + + L +
Sbjct: 1 MPRILDRALRPAATALAMLMLAFAAGCAGNGAALSNVHYDLGPAASVVTAGTGP-ALKVL 59
Query: 61 EPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ L+++ + R + S+W+ +++ +L + G V++
Sbjct: 60 DVAAPDALDTDKFVYRLTYADAQRTAVYRDSRWTAPPAQLLTQRLRGALSSRG---AVLE 116
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 117 GSDGVRAP-TLKVDLNEFEQVFDGESQSHGAVTARATLMQDGKVLGQRTFVARAPSSTPD 175
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 176 AAGGARALAAASDELVSQIAAWV 198
>gi|17545035|ref|NP_518437.1| lipoprotein [Ralstonia solanacearum GMI1000]
gi|17427325|emb|CAD13844.1| putative cog3218, abc-type uncharacterized transport system,
auxiliary component abc transporter protein [Ralstonia
solanacearum GMI1000]
Length = 211
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 60/183 (32%), Gaps = 14/183 (7%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS---SPIEIQYLIGS 88
P +YD + + L +TE + ++ I R + S
Sbjct: 27 PTAPAAVYDFGLAPAAAGGPRLPTALRVTEVVGPGWMDGNAIYYRLAYAQGQRTELYANS 86
Query: 89 QWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA---I 145
+W + + +L G++ P + + F DR A +
Sbjct: 87 RWVESPVNLFDARLRNAVAARGQVVGYGLPEVP-----TLRVELVDFSQVFDRPDASRGV 141
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS-SLP 204
+ + + A LV Q+V + + + +L +A R E++DW +LP
Sbjct: 142 VRLRASVFMARG--LVAQRVVQADVPAPSADAAGGVSALAQASDRAIGEVLDWVAGLALP 199
Query: 205 LSD 207
+
Sbjct: 200 AAA 202
>gi|319791000|ref|YP_004152640.1| hypothetical protein Varpa_0307 [Variovorax paradoxus EPS]
gi|315593463|gb|ADU34529.1| protein of unknown function DUF330 [Variovorax paradoxus EPS]
Length = 224
Score = 69.2 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/215 (13%), Positives = 70/215 (32%), Gaps = 21/215 (9%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ------ 56
K + + +A+L+ + +YD +
Sbjct: 2 KTTTHPLASALAGLGIALLVA-GCGALPDKPARAKLYDFGPGVSAMATAPAAAASPALPM 60
Query: 57 LIITEPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKI 112
L + E L+ I+ R E++ S+WS ++++ +L + E +
Sbjct: 61 LALAEIEANTRLDGTQILYRLGYADTNELRPYGQSRWSQPPAQLLRQRLRDSLAERRTVL 120
Query: 113 S----TVVKPNQGIYADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDN--SLVGQ 163
+ ++G D + ++ F D + ++ + +I ++GQ
Sbjct: 121 GPEESATLARSKGEVPD-TLRISLDEFSHYFDSPASSAGLVRLRATLIRGGTGGDRVLGQ 179
Query: 164 KVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
K F V + +++L A +E+ W
Sbjct: 180 KTFTVRRPAPSADAPGGVKALAAASDAAVAEVTQW 214
>gi|172061850|ref|YP_001809502.1| ABC transporter auxiliary component-like protein [Burkholderia
ambifaria MC40-6]
gi|171994367|gb|ACB65286.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia ambifaria MC40-6]
Length = 207
Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 73/203 (35%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ +L + + YDL + + L +
Sbjct: 1 MPRILDRALRPAATALAMLMLAFAAGCAGNGAALSNVRYDLGPAASVVTAGTGP-ALKVL 59
Query: 61 EPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ L+++ + R + S+W+ +++ +L + G V++
Sbjct: 60 DVAAPDALDTDKFVYRLTYADAQRTAVYRDSRWTAPPAQLLTQRLRGALSSRG---AVLE 116
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 117 GSDGVRAP-TLKVDLNEFEQVFDGESQSHGAVTARATLMQDGKVLGQRTFIARAPSSTPD 175
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 176 AAGGARALAAASDELVSQIAAWV 198
>gi|170703965|ref|ZP_02894627.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia ambifaria IOP40-10]
gi|170131128|gb|EDS99793.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia ambifaria IOP40-10]
Length = 207
Score = 68.8 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 73/203 (35%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L++ ++ + ++ +L + + YDL + + L +
Sbjct: 1 MPRILDRALRPAATALAMLMLAFAAGCAGNGAALSNVRYDLGPAASVVTAGTGP-ALKVL 59
Query: 61 EPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ L+++ + R + S+W+ +++ +L + G V++
Sbjct: 60 DVAAPDALDTDKFVYRLTYADAQRTAVYRDSRWTAPPAQLLTQRLRGALSSRG---AVLE 116
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ+ F +
Sbjct: 117 GSDGVRAP-TLKVDLNEFEQVFDGQSQSHGAVTARATLMQDGKVLGQRTFVARAPSSTPD 175
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
++L A + S+I W
Sbjct: 176 AAGGARALAAASDELVSQIAAWV 198
>gi|294338720|emb|CAZ87052.1| putative ABC-type uncharacterized transport system, auxiliary
component [Thiomonas sp. 3As]
Length = 206
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/185 (12%), Positives = 64/185 (34%), Gaps = 3/185 (1%)
Query: 27 SSCFFHNNPVN-IYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
+ + PV Y LT + + + + + S ++ SP ++
Sbjct: 22 CALPVNRAPVQQTYRLTATEIRTAPLPQATVIQLLPVRASAGFQSPAMMYSRSPDTLEPY 81
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI 145
S+W +++ + IS V + + A + + + E ++ +
Sbjct: 82 RDSRWLAPPAQLVGEAIARTLSRQPWISAVQQQAVLVNAPWTLHCKLNRLEHDVHANQGT 141
Query: 146 ITMSL--KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ + L + N + + F + + ++ HF Q + I++ T +++
Sbjct: 142 VHLDLVCDLANQRTSRIAAHWHFDGSQTIAVNDAAHFAQGAQTLLDQALKGIVENTRAAV 201
Query: 204 PLSDN 208
+ +
Sbjct: 202 AAAQS 206
>gi|15641759|ref|NP_231391.1| hypothetical protein VC1755 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121585825|ref|ZP_01675619.1| lipoprotein, putative [Vibrio cholerae 2740-80]
gi|121729804|ref|ZP_01682239.1| lipoprotein, putative [Vibrio cholerae V52]
gi|147673513|ref|YP_001217297.1| putative lipoprotein [Vibrio cholerae O395]
gi|153212078|ref|ZP_01947895.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|153819625|ref|ZP_01972292.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
gi|227081902|ref|YP_002810453.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|229508141|ref|ZP_04397646.1| hypothetical protein VCF_003375 [Vibrio cholerae BX 330286]
gi|229511620|ref|ZP_04401099.1| hypothetical protein VCE_003029 [Vibrio cholerae B33]
gi|229518759|ref|ZP_04408202.1| hypothetical protein VCC_002784 [Vibrio cholerae RC9]
gi|229529225|ref|ZP_04418615.1| hypothetical protein VCG_002318 [Vibrio cholerae 12129(1)]
gi|229607717|ref|YP_002878365.1| hypothetical protein VCD_002629 [Vibrio cholerae MJ-1236]
gi|254285306|ref|ZP_04960271.1| lipoprotein, putative [Vibrio cholerae AM-19226]
gi|254848871|ref|ZP_05238221.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255744829|ref|ZP_05418779.1| putative lipoprotein [Vibrio cholera CIRS 101]
gi|262161888|ref|ZP_06030906.1| putative lipoprotein [Vibrio cholerae INDRE 91/1]
gi|262169756|ref|ZP_06037447.1| putative lipoprotein [Vibrio cholerae RC27]
gi|298498174|ref|ZP_07007981.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
gi|9656277|gb|AAF94905.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121549963|gb|EAX59981.1| lipoprotein, putative [Vibrio cholerae 2740-80]
gi|121628456|gb|EAX60947.1| lipoprotein, putative [Vibrio cholerae V52]
gi|124116874|gb|EAY35694.1| lipoprotein, putative [Vibrio cholerae 1587]
gi|126509829|gb|EAZ72423.1| lipoprotein, putative [Vibrio cholerae NCTC 8457]
gi|146315396|gb|ABQ19935.1| putative lipoprotein [Vibrio cholerae O395]
gi|150424578|gb|EDN16514.1| lipoprotein, putative [Vibrio cholerae AM-19226]
gi|227009790|gb|ACP06002.1| putative lipoprotein [Vibrio cholerae M66-2]
gi|227013657|gb|ACP09867.1| putative lipoprotein [Vibrio cholerae O395]
gi|229332999|gb|EEN98485.1| hypothetical protein VCG_002318 [Vibrio cholerae 12129(1)]
gi|229343448|gb|EEO08423.1| hypothetical protein VCC_002784 [Vibrio cholerae RC9]
gi|229351585|gb|EEO16526.1| hypothetical protein VCE_003029 [Vibrio cholerae B33]
gi|229355646|gb|EEO20567.1| hypothetical protein VCF_003375 [Vibrio cholerae BX 330286]
gi|229370372|gb|ACQ60795.1| hypothetical protein VCD_002629 [Vibrio cholerae MJ-1236]
gi|254844576|gb|EET22990.1| conserved hypothetical protein [Vibrio cholerae MO10]
gi|255737300|gb|EET92695.1| putative lipoprotein [Vibrio cholera CIRS 101]
gi|262021990|gb|EEY40700.1| putative lipoprotein [Vibrio cholerae RC27]
gi|262028620|gb|EEY47275.1| putative lipoprotein [Vibrio cholerae INDRE 91/1]
gi|297542507|gb|EFH78557.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
Length = 192
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 28 SCFFHNNP-VNIYDLTESTKYDES-VQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQY 84
C P V+ Y L + + E + + L++ +P+ L+++ I+ R S ++
Sbjct: 15 GCGGTPQPKVSFYLLPNNPELSEHIQPKTLPLLVVQPVELAAYLDTQGIVYRQSETQVIQ 74
Query: 85 LIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+QW+ +L + ++ + + + + +++ ++ F +
Sbjct: 75 ARQNQWAQRLSPQLTQRITNDLRRKQSRYWPAPLNASSIQQEHWKLQVRLQRFNGVYTGN 134
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A + + +++N S++ + F + L+ +++L+ ++S++I
Sbjct: 135 -AEVAGNWELLNPKGESML-NQEFSFQVPLKDTGYPALVEALSAGVDQLSTQI 185
>gi|153802180|ref|ZP_01956766.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|229515138|ref|ZP_04404598.1| hypothetical protein VCB_002795 [Vibrio cholerae TMA 21]
gi|229523837|ref|ZP_04413242.1| hypothetical protein VCA_001414 [Vibrio cholerae bv. albensis
VL426]
gi|124122315|gb|EAY41058.1| lipoprotein, putative [Vibrio cholerae MZO-3]
gi|229337418|gb|EEO02435.1| hypothetical protein VCA_001414 [Vibrio cholerae bv. albensis
VL426]
gi|229347843|gb|EEO12802.1| hypothetical protein VCB_002795 [Vibrio cholerae TMA 21]
Length = 192
Score = 67.7 bits (164), Expect = 8e-10, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 28 SCFFHNNP-VNIYDLTESTKYDE-SVQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQY 84
C P V+ Y L + + E + + + L++ +P+ L+++ I+ R S ++
Sbjct: 15 GCGGTPQPKVSFYLLPNNPELSELTQPKTLPLLVVQPVELAAYLDTQGIVYRQSETQVIQ 74
Query: 85 LIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+QW+ +L + ++ + + + + +++ ++ F +
Sbjct: 75 ARQNQWAQRLSPQLTQRITNDLRRKQSRYWPAPLNASSIQQEHWKLQVRLQRFNGVYTGN 134
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A + S +++N S++ + F + L+ +++L+ ++S++I
Sbjct: 135 -AEVAGSWELLNPKGESML-NQEFSFQVPLKDTGYPALVEALSAGVDQLSTQI 185
>gi|296160364|ref|ZP_06843181.1| protein of unknown function DUF330 [Burkholderia sp. Ch1-1]
gi|295889345|gb|EFG69146.1| protein of unknown function DUF330 [Burkholderia sp. Ch1-1]
Length = 208
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 76/206 (36%), Gaps = 16/206 (7%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNI----YDLTESTKYDESVQRHIQ 56
M + +++++ S +LAVLL + + P I YD +
Sbjct: 1 MSRSIHRLLSS---SAALAVLLAFGVLATGCAGTPAAISDIRYDFGPPAPAASAGTSP-A 56
Query: 57 LIITEPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIS 113
+ + + +L S+ ++ R S + S W+ +++ +L + G
Sbjct: 57 VKVLDVTAPDVLESDKLMYRLSYADAQQTASYANSHWTMMPSQLLTQRLRGALSSRG--- 113
Query: 114 TVVKPNQGIYADYQIISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKL 172
TV+ G+ A + + FE D R + ++ + + ++GQ+ F
Sbjct: 114 TVLTGADGVSAPV-LKVELSEFEQVFDSRSESHAAVTARATLTQGSRVIGQRTFIARAPS 172
Query: 173 EKDNKLHFIQSLNRAFSRISSEIIDW 198
+ Q+L A + ++I W
Sbjct: 173 SSGDAAGGAQALATASDDLVAQIGAW 198
>gi|153827987|ref|ZP_01980654.1| putative lipoprotein [Vibrio cholerae 623-39]
gi|148876568|gb|EDL74703.1| putative lipoprotein [Vibrio cholerae 623-39]
Length = 192
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 28 SCFFHNNP-VNIYDLTESTKYDE-SVQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQY 84
C P V+ Y L + + E + + + L++ +P+ L+++ I+ R S ++
Sbjct: 15 GCGGTPQPKVSFYLLPNNPELSELTQPKTLPLLVVQPVELAAYLDTQGIVYRQSETQVIQ 74
Query: 85 LIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+QW+ +L + ++ + + + + +++ ++ F +
Sbjct: 75 ARQNQWAQRLSPQLTQRITNDLRRKQSRYWPAPLNASSIQQEHWKLQVRLQRFNGVYTGN 134
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A + + +++N S++ + F + L+ +++L+ ++S++I
Sbjct: 135 -AEVAGNWELLNPKGESML-NQEFSFQVPLKDTGYPALVEALSAGVDQLSTQI 185
>gi|83594243|ref|YP_427995.1| ABC-type transport system auxiliary component-like [Rhodospirillum
rubrum ATCC 11170]
gi|83577157|gb|ABC23708.1| ABC-type uncharacterized transport system auxiliary component-like
[Rhodospirillum rubrum ATCC 11170]
Length = 203
Score = 67.7 bits (164), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 65/197 (32%), Gaps = 7/197 (3%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHN-NPVNI-YDLTESTKYDE--SVQRHIQLIITEPI 63
I+ + + L+ C P + Y L + + + +T +
Sbjct: 2 ILSRISRPLAALFAAGVLLAGCTAAPPAPTDTFYRLDAAEGVMPVLGQPQPRVVEVTRFL 61
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
+L + S+ ++ W + P ++Q +L+ + VV P
Sbjct: 62 AAGVLADRPVAHTSTGRVLEQYAYDFWIETPPVLLQQQLVEYLRAANVFTQVVTPELRAR 121
Query: 124 ADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
D I I FE + A +++ L +I+ + + + + + L
Sbjct: 122 TDLTIRGRILRFEHLLPPSGAAGVAVSIELSLIDTATDDVKLLGTYVETVPADNTSVLAA 181
Query: 181 IQSLNRAFSRISSEIID 197
++ A +RI + +
Sbjct: 182 TSAMREAVARIYARFVA 198
>gi|300692710|ref|YP_003753705.1| hypothetical protein RPSI07_3094 [Ralstonia solanacearum PSI07]
gi|299079770|emb|CBJ52447.1| conserved exported protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 211
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 58/183 (31%), Gaps = 14/183 (7%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS---SPIEIQYLIGS 88
P +YD + + L + E + ++ I R + S
Sbjct: 27 PTAPAAVYDFGLAPAAAGGSRLPTALRVAEVVGPGWMDGNAIYYRLAYAQGQRTELYAAS 86
Query: 89 QWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH---CAI 145
+W + + +L G++ P + + F DR +
Sbjct: 87 RWVESPVNLFDARLRNAVAARGQVIGYGLPEVP-----TLRIELVDFSQVFDRPDTSRGV 141
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS-SLP 204
+ + + A LV Q+V + + + +L +A R E++DW +LP
Sbjct: 142 VRLRASVFMARG--LVAQRVVQADVPAPSADAAGGVSALAQASDRAIGEVLDWVAGLALP 199
Query: 205 LSD 207
+
Sbjct: 200 AAA 202
>gi|296134759|ref|YP_003642001.1| protein of unknown function DUF330 [Thiomonas intermedia K12]
gi|295794881|gb|ADG29671.1| protein of unknown function DUF330 [Thiomonas intermedia K12]
Length = 212
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 63/185 (34%), Gaps = 3/185 (1%)
Query: 27 SSCFFHNNPVN-IYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
+ + PV Y L + + + + + S ++ SP ++
Sbjct: 28 CALPVNRAPVQQTYRLAATEIRTAPLPQATVIQLLPVRAAAGFQSPAMMYSRSPDTLEPY 87
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAI 145
S+W +++ + +S V + + A + + + E ++ +
Sbjct: 88 RDSRWLAPPAQLVGEAIDRTLSRQPWVSAVQQQAVLVNAPWTLHCKLNRLEHDVHANQGT 147
Query: 146 ITMSL--KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ + L + N + + F + + ++ HF Q + I++ T S++
Sbjct: 148 VHLDLVCDLANQRTSRIAAHWHFDGRQPIAVNDAAHFAQGAQTLLDQALKGIMENTRSAV 207
Query: 204 PLSDN 208
+ +
Sbjct: 208 AAAQS 212
>gi|34558307|ref|NP_908122.1| hypothetical protein WS2020 [Wolinella succinogenes DSM 1740]
gi|34484026|emb|CAE11022.1| hypothetical protein WS2020 [Wolinella succinogenes]
Length = 191
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 64/174 (36%), Gaps = 11/174 (6%)
Query: 27 SSCFFHNNPVN-IYDLTESTKYDESV-QRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
C +Y+LT +S +L I P ++ +I + + Y
Sbjct: 17 GGCLAKEAQAPKLYELTYKPSAPQSSCASKKRLGIATPSALGKVDRVEIPY-NEGSRVGY 75
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI---DR 141
+ +W D M+Q L+ ++ + P + + S I + E+ +
Sbjct: 76 YVEHRWVDLPSSMLQKLLLDAL-SSSCFEPFLPPFSAVLPPLVLQSKILTLEVRLRPEGG 134
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A+ ++ + + V +E LE+ I+++NRA +++ E+
Sbjct: 135 AVAVAEVAFSLAGEKSH----SWVIRHQEPLERIEASLAIEAMNRALNKVVQEL 184
>gi|327484342|gb|AEA78749.1| probable lipoprotein protein YPO1422 [Vibrio cholerae LMA3894-4]
Length = 185
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 29 CFFHNNP-VNIYDLTESTKYDES-VQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQYL 85
C P V+ Y L + + E + + L++ +P+ L+++ I+ R S ++
Sbjct: 9 CGGTPQPKVSFYLLPNNPELSEHIQPKTLPLLVVQPVELAAYLDTQGIVYRQSETQVIQA 68
Query: 86 IGSQWSDKL-PRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+QW+ +L P++ Q ++ + + + + +++ ++ F +
Sbjct: 69 RQNQWAQRLSPQLTQ-RITNDLRRKQSRYWPAPLNASSIQQEHWKLQVRLQRFNGVYTGN 127
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A + + +++N S++ + F + L+ +++L+ ++S++I
Sbjct: 128 -AEVAGNWELLNPKGESML-NQEFSFQVPLKDTGYPALVEALSAGVDQLSTQI 178
>gi|238028749|ref|YP_002912980.1| ABC transporterauxiliary component-like protein [Burkholderia
glumae BGR1]
gi|237877943|gb|ACR30276.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia glumae BGR1]
Length = 214
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/212 (12%), Positives = 71/212 (33%), Gaps = 10/212 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE--STKYDESVQRHIQLI 58
M + ++ ++ + VL + + YDL + + + L
Sbjct: 6 MSRFTVVYARRAALAGTAFVLALLAGCASDAARMSDIRYDLGPIDPSAFVAAPASGTVLT 65
Query: 59 ITEPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
+ + +++ R I S+W+ +++ +L A ++G TV
Sbjct: 66 VPDMRAPDAFDTDKFAYRLAYADAQRIAAYRDSRWTAPPAQLLTQRLRAALASHG---TV 122
Query: 116 VKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + A + + FE D + ++++ +++GQ+ F
Sbjct: 123 LDGGDAVRAPV-LHVELDEFEQVFDGQDQSHGEVAVRATLTRQGTVLGQRSFVSRAPART 181
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLPLS 206
+ +L A + + +++ W S
Sbjct: 182 PDAAGGAAALAAASNELVGQLVAWLAVQASAS 213
>gi|229520654|ref|ZP_04410077.1| hypothetical protein VIF_001179 [Vibrio cholerae TM 11079-80]
gi|229342209|gb|EEO07204.1| hypothetical protein VIF_001179 [Vibrio cholerae TM 11079-80]
Length = 192
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 28 SCFFHNNP-VNIYDLTESTKYDE-SVQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQY 84
C P V+ Y L + + E + + + L++ +P+ L+++ I+ R S ++
Sbjct: 15 GCAGTPQPKVSFYLLPNNPELSELTQPKTLPLLVVQPVELAAYLDTQGIVYRQSETQVIQ 74
Query: 85 LIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+QW+ +L + ++ + + + + +++ ++ F +
Sbjct: 75 ARQNQWAQRLSPQLTQRITNDLRRKQSRYWPAPLNTSSIQQEHWKLQVRLQRFNGVYTGN 134
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A + + +++N S++ + F + L+ +++L+ ++S++I
Sbjct: 135 -AEVAGNWELLNPKGESML-NQEFSFQVPLKDTGYPALVEALSAGVDQLSTQI 185
>gi|153826262|ref|ZP_01978929.1| lipoprotein, putative [Vibrio cholerae MZO-2]
gi|149740027|gb|EDM54202.1| lipoprotein, putative [Vibrio cholerae MZO-2]
Length = 192
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 28 SCFFHNNP-VNIYDLTESTKYDE-SVQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQY 84
C P V+ Y L + + E + + + L++ +P+ L+++ I+ R S ++
Sbjct: 15 GCGGTPQPKVSFYLLPNNPELSELTQPKTLPLLVVQPVELAAYLDTQGIVYRQSETQVIQ 74
Query: 85 LIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+QW+ +L + ++ + + + + +++ ++ F +
Sbjct: 75 ARQNQWAQRLSPQLTQRITNDLRRKQSRYWPAPLNASSIQQEHWKLQVRLQRFNGVYTGN 134
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A + + +++N S++ + F + L+ +++L+ ++S++I
Sbjct: 135 -AEVAGNWELLNPKGESML-NQEFSFQVPLKNTGYPALVEALSAGVDQLSTQI 185
>gi|308272471|emb|CBX29075.1| hypothetical protein N47_J00560 [uncultured Desulfobacterium sp.]
Length = 200
Score = 66.9 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 72/195 (36%), Gaps = 6/195 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
+ L+ + + Y L + +I + + NS+ I
Sbjct: 2 LACVFLMLSGCGGFGGSETKTDFYTLEYDPPKLAGLNTLPFIIKVDRFKSPLYNSDKISY 61
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
R + + + +W R++ L + +N+G V G A + + + F
Sbjct: 62 RKNDFQTDEYLYHRWETDPARLVSYFLFRDIKNSGLFKGVFTYEAGFPATHSVSGTVDEF 121
Query: 136 EINIDRHC--AIITMSLKIINAH----DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ A++++ + ++ + ++ QK + ++ K N +++++A
Sbjct: 122 FEDDRGKTWEAVLSLDIVLMAENEPDLSKKILFQKKYSTRKECAKKNPKALAEAMSKAMQ 181
Query: 190 RISSEIIDWTLSSLP 204
+S +II+ SLP
Sbjct: 182 ELSGQIINDIYKSLP 196
>gi|255020879|ref|ZP_05292935.1| Probable lipoprotein [Acidithiobacillus caldus ATCC 51756]
gi|254969670|gb|EET27176.1| Probable lipoprotein [Acidithiobacillus caldus ATCC 51756]
Length = 161
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/148 (14%), Positives = 59/148 (39%), Gaps = 7/148 (4%)
Query: 57 LIITEPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIS 113
L + E L+S + R P ++Y ++W+ +M++ + + E +G
Sbjct: 2 LQVAEVEAPAWLDSSHYLYRLDYRDPEALRYYGDARWAAAPAQMLRAAAVTSLEQSGDWQ 61
Query: 114 TVVKPNQGIYADYQIISAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEE 170
V+ + +++ +++F +N A + + +++ S+V Q+ F
Sbjct: 62 AVLTRGEAKKR-FRLELRLQNFMLNFSGPDSGQAELAYTATLVDTQSFSVVAQREFLQRV 120
Query: 171 KLEKDNKLHFIQSLNRAFSRISSEIIDW 198
L + ++ A + +++ W
Sbjct: 121 PLRQIGPQGGAAAMAEATAASMAQLRSW 148
>gi|187922501|ref|YP_001894143.1| hypothetical protein Bphyt_0494 [Burkholderia phytofirmans PsJN]
gi|187713695|gb|ACD14919.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 208
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 66/203 (32%), Gaps = 10/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNI-YDLTESTKYDESVQRHIQLII 59
M + +++ + L + +I YD + + + +
Sbjct: 1 MSRSIHRFLPTSAALAVLLAFGVLAAGCAGTPAALSDIRYDFGPPSPAASAGTSP-AVKV 59
Query: 60 TEPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
+ +L S+ ++ R S + S W+ +++ +L + G TV+
Sbjct: 60 LDVSAPDVLESDKLMYRLSYADAQQTAAYANSHWTMTPSQLLTQRLRGALSSRG---TVL 116
Query: 117 KPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175
G+ A + + FE D + ++ + ++ Q+ F
Sbjct: 117 TGADGVAAPV-LKVDLSEFEQVFDSQSESHAAVTARATLTQSGKVLSQRTFIARAPSRSA 175
Query: 176 NKLHFIQSLNRAFSRISSEIIDW 198
+ Q+L A + S+I W
Sbjct: 176 DAAGGAQALATASDDLVSQIGAW 198
>gi|167892585|ref|ZP_02479987.1| putative lipoprotein [Burkholderia pseudomallei 7894]
Length = 180
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 9/180 (5%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAAYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + + ++GQ+ F +
Sbjct: 122 ADDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARATLTQEGKVLGQRTFVSRAPASTPD 180
>gi|187476648|ref|YP_784671.1| hypothetical protein BAV0133 [Bordetella avium 197N]
gi|115421234|emb|CAJ47739.1| putative exported protein [Bordetella avium 197N]
Length = 196
Score = 66.5 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/193 (13%), Positives = 69/193 (35%), Gaps = 6/193 (3%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVR 76
++AV+L + S +DL + + + ++ + ++ I
Sbjct: 7 AMAVVLTLAGCSVGRVAPQAARFDLGLEAPAQRQLPARVPITLSYSAVPTLNDTGVIWRV 66
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
+ + G +W++ +++ +L G V+ + A Q+ + FE
Sbjct: 67 ADSTAPKAYAGFRWNEAPASLVRQRLQERLSREG---AVLSDSASPGAP-QLRVELTRFE 122
Query: 137 INI--DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
D + + L+ + + L+GQ+ F + + + +L +A + +
Sbjct: 123 QVFAPDGRSSQGQVVLQALVLQNGKLLGQRRFARQADAPTQDAAGGVTALRQATDGAAED 182
Query: 195 IIDWTLSSLPLSD 207
+ W LP +
Sbjct: 183 LAAWLADLLPQAA 195
>gi|33594882|ref|NP_882525.1| hypothetical protein BPP0164 [Bordetella parapertussis 12822]
gi|33599157|ref|NP_886717.1| hypothetical protein BB0166 [Bordetella bronchiseptica RB50]
gi|33564958|emb|CAE39905.1| putative exported protein [Bordetella parapertussis]
gi|33575203|emb|CAE30666.1| putative exported protein [Bordetella bronchiseptica RB50]
Length = 201
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 24/192 (12%), Positives = 61/192 (31%), Gaps = 4/192 (2%)
Query: 17 SLAVLLCTSLSSCFFH--NNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDII 74
++ VL L+ C P ++DL ++ +++ + ++ I
Sbjct: 6 AIIVLSALLLAGCGAGRMAAPPALFDLGADVAATPALPARQPIVLAFEAVPYLSDTGVIW 65
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
S+W+ +++ +L+ + G + + +
Sbjct: 66 RVGDSASPHAYARSRWASAPAELVRQRLVERLSHQGPVLGAGMGAGLAQVQVTLTRFEQV 125
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F + + M ++ D +VGQ E + +Q+L +A + E
Sbjct: 126 FAADGQASVGHVAMQAVLL--QDRQVVGQVRIAREAPAATQDAAGGVQALRQATDAAADE 183
Query: 195 IIDWTLSSLPLS 206
+ W + +
Sbjct: 184 LAGWLAGRVAAA 195
>gi|170734241|ref|YP_001766188.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia cenocepacia MC0-3]
gi|169817483|gb|ACA92066.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia cenocepacia MC0-3]
Length = 221
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 9/165 (5%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLP 95
YDL ++ + L + + L+S+ R + S+W+
Sbjct: 53 YDLGPASSVTTTGSGP-ALKVLDVAAPDALDSDKFAYRLAYADAQHVAVYRDSRWTAPPA 111
Query: 96 RMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIIN 154
+++ +L + G TV++ G+ A + + FE D + ++ +
Sbjct: 112 QLLTQRLRGALSSRG---TVLEGADGVRAP-TLKVDLSEFEQVFDGQSQSHGAVTARATL 167
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
D ++GQ+ F + ++L A + S+I W
Sbjct: 168 MLDGKVLGQRTFVARAPSSTPDAAGGARALAAASDELVSQIAAWV 212
>gi|327399068|ref|YP_004339937.1| hypothetical protein Hipma_0908 [Hippea maritima DSM 10411]
gi|327181697|gb|AEA33878.1| hypothetical protein Hipma_0908 [Hippea maritima DSM 10411]
Length = 187
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 67/186 (36%), Gaps = 9/186 (4%)
Query: 18 LAVLLCTSLSSCFFHN-NPVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
L +++ L C FH P+ Y L + + + +++++ +S I
Sbjct: 4 LILIVFLFLVGCSFHKLPPLREYTLNLKPIAFKLDRKVRKTIVVSDVDCGAPFDSTFIFF 63
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ E +W + M + + + +Y++ I F
Sbjct: 64 KKGKFEFDRYGNVRWIKPVCLMYKTSIEHVLNKTHLFV----SGDILRPNYRLSYVIYDF 119
Query: 136 E--INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
E +R AI + ++ + ++ + F K+ ++ I SLN F+ S
Sbjct: 120 EPLFLANRTYAICNIEFRLKDENNGKIY-IHAFSKSIKINGNSFDDVISSLNDLFNLSLS 178
Query: 194 EIIDWT 199
++I+W
Sbjct: 179 DLINWI 184
>gi|167844081|ref|ZP_02469589.1| putative lipoprotein [Burkholderia pseudomallei B7210]
Length = 175
Score = 65.4 bits (158), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 60/175 (34%), Gaps = 9/175 (5%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M L++ + + V+ S + YDL + S L +
Sbjct: 6 MSGSLSRRGRPALALAVALVMASASGCAGTPAALANIRYDLGPAQPAASSGTGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ LN++ + R S I S+W+ +++ +L +G+ V+
Sbjct: 65 DVSAPDALNTDRFVYRLAYSDAQRIAVYRDSKWTAPPAQLLTQRLRGAL--SGR-GAVLA 121
Query: 118 PNQGIYADYQIISAIRSFEINIDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEK 171
+ G+ A + + FE D + ++ + + ++GQ+ F
Sbjct: 122 GDDGVRAPV-LKVELSEFEQVFDGRSESHAAVTARATLTQEGKVLGQRTFVSRAP 175
>gi|33591359|ref|NP_879003.1| hypothetical protein BP0101A [Bordetella pertussis Tohama I]
gi|33571001|emb|CAE40480.1| putative exported protein [Bordetella pertussis Tohama I]
Length = 200
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 59/184 (32%), Gaps = 5/184 (2%)
Query: 17 SLAVLLCTSLSSCFFH--NNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDII 74
++ VL L+ C P ++DL ++ +++ + ++ I
Sbjct: 6 AIIVLSALLLAGCGAGRMAAPPALFDLGADVAATPALPARQPIVLAFEAVPYLSDTGVIW 65
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
S+W+ +++ +L+ + G + + +
Sbjct: 66 RVGDSASPHAYARSRWASAPAELVRQRLVERLSHQGPVLGAGMGAGLAQVQVTLTFE-QV 124
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F + + M ++ D +VGQ E + +Q+L +A + E
Sbjct: 125 FAADGQASVGHVAMQAVLL--QDRQVVGQVRIAREAPAATQDAAGGVQALRQATDAAADE 182
Query: 195 IIDW 198
+ W
Sbjct: 183 LAGW 186
>gi|94263141|ref|ZP_01286959.1| hypothetical protein MldDRAFT_1501 [delta proteobacterium MLMS-1]
gi|93456512|gb|EAT06626.1| hypothetical protein MldDRAFT_1501 [delta proteobacterium MLMS-1]
Length = 211
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 71/188 (37%), Gaps = 8/188 (4%)
Query: 25 SLSSCFFHNNPV--NIYDLTESTKYDESVQRHIQLI-ITEPITEKILNSEDIIVRSSPIE 81
+ ++C P N + L + D +++ + + ++I+ R +
Sbjct: 19 ATAACAPQKQPPERNFFVLEAARAVDNHWHEPQKILSVRDFEVSPGFRGKEIVYRKGRGQ 78
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
+ +Q+ M+ ++G V+ ADY + A+ S +
Sbjct: 79 SEADFYNQYFIPPGAMLTDATREWLADSGMFEAVIPMGSHKEADYLLEGAVISLYGDFQE 138
Query: 142 ---HCAIITMSLKII--NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
A++ M ++ + D L+ + + + L H +Q LN+A +RI +++
Sbjct: 139 RREPAAVLRMQFLLLEDDGPDYRLLMHRTYREQVSLPGTGAGHVVQGLNKALTRILTQLE 198
Query: 197 DWTLSSLP 204
S++P
Sbjct: 199 KDMASAIP 206
>gi|254224892|ref|ZP_04918507.1| lipoprotein, putative [Vibrio cholerae V51]
gi|297579330|ref|ZP_06941258.1| conserved hypothetical protein [Vibrio cholerae RC385]
gi|125622580|gb|EAZ50899.1| lipoprotein, putative [Vibrio cholerae V51]
gi|297536924|gb|EFH75757.1| conserved hypothetical protein [Vibrio cholerae RC385]
Length = 192
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 74/173 (42%), Gaps = 7/173 (4%)
Query: 28 SCFFHNNP-VNIYDLTESTKYDE-SVQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQY 84
C P V+ Y L + + E + + + L++ +P+ L+++ ++ R S ++
Sbjct: 15 GCGGTPQPKVSFYLLPNNPELSELTQPKGLPLLVVQPVELAAYLDTQGVVYRQSETQVIQ 74
Query: 85 LIGSQWSDKLPRMIQLKLIANFE--NNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+QW+ +L + ++ + + + + +++ ++ F +
Sbjct: 75 ARQNQWAQRLSPQLTQRITNDLRHKQSRYWPAPLNASSIQQEHWKLQVRLQRFNGVYTGN 134
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A + S +++N S++ + F + L+ +++L+ ++S++I
Sbjct: 135 -AEVAGSWELLNPKGESML-NQEFSFQVPLKDTGYPALVEALSAGIDQLSTQI 185
>gi|218780627|ref|YP_002431945.1| ABC transporter [Desulfatibacillum alkenivorans AK-01]
gi|218762011|gb|ACL04477.1| ABC-type transport system auxiliary component-like protein
[Desulfatibacillum alkenivorans AK-01]
Length = 212
Score = 65.0 bits (157), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/195 (15%), Positives = 70/195 (35%), Gaps = 10/195 (5%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCF---FHNNPVNIYDLT-ESTKYDESVQRHIQLIITEPI 63
+ +II L+ +L +C P+ Y L ES K +++ ++I
Sbjct: 1 MKPGRIIPIICTALMLGALPACNISRTAATPITHYTLEYESPKMEKAEVLPYVIMIKRFS 60
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
N II R +W + L +F+ + V+ + +
Sbjct: 61 VSPDYNMLPIIYRDKAFVRNTYSYHRWRANPGDLATYYLARDFKAQSAFTAVLSYDSNLR 120
Query: 124 ADYQIISAIRSFEINIDRH--CAIITMSLKIINAH----DNSLVGQKVFHVEEKLEKDNK 177
+ + + F A++ S+ ++ H +V QK + + +K ++ N
Sbjct: 121 MTHTLEGVVEEFYERDGEDSWEAVLGFSVTLVKMHEPDVTRQIVFQKQYRLTQKADEKNP 180
Query: 178 LHFIQSLNRAFSRIS 192
+++++A + S
Sbjct: 181 ESIAKAMSQAMEKAS 195
>gi|239904660|ref|YP_002951398.1| hypothetical protein DMR_00210 [Desulfovibrio magneticus RS-1]
gi|239794523|dbj|BAH73512.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 211
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/204 (15%), Positives = 65/204 (31%), Gaps = 16/204 (7%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
+ +L LL SL+ CF P Y + Q + PI K L +
Sbjct: 5 SLLGRVALTGLLAVSLAGCFGKPPPEQRYLRVALGETPCPGSASQQHRL--PIAFKPLKT 62
Query: 71 ----EDIIVRSSPI-----EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
+ V ++ +QY W ++ L E T V
Sbjct: 63 MENLDRTSVMTAQNNVLTASLQYY----WEGAPQDVVGAALRQGLECQSSAVTPVDYQPR 118
Query: 122 IYADYQIISAIRSFEINI-DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ + + +F ++ D ++++ L + + + + F+ L
Sbjct: 119 VDRSAVLSGELTAFNVDYTDGGRFVVSLRLDLWSKDMGTRLSSGEFNAYAPLTDFKGSTI 178
Query: 181 IQSLNRAFSRISSEIIDWTLSSLP 204
+ + A R+ +++ W LP
Sbjct: 179 AAAASDALGRVVPKVVVWMDQGLP 202
>gi|237749355|ref|ZP_04579835.1| lipoprotein [Oxalobacter formigenes OXCC13]
gi|229380717|gb|EEO30808.1| lipoprotein [Oxalobacter formigenes OXCC13]
Length = 205
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 25/203 (12%), Positives = 70/203 (34%), Gaps = 19/203 (9%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILN 69
+ ++ L+V L + P +YD +I +
Sbjct: 11 FRLFVAAILSVFLL-GACALGDGRPPATLYDFGPLKTNGLVQLPDDMPVIRTRVHSPEWM 69
Query: 70 SEDIIVRS----SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY-- 123
SE+++ + ++++ S W+ ++ + +L + +++ G
Sbjct: 70 SENLMYYRLNYVNDQQVRFYTESSWNTNPAKLFKNRL------DSYLASAGSTVTGFRTT 123
Query: 124 -ADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ I F + A +++ + D L+ QK F + +
Sbjct: 124 SPTLTVRVYIEDFGQHFTSPSASVGHVSLRASLFRGKD--LIAQKSFTRDIPATTADAAG 181
Query: 180 FIQSLNRAFSRISSEIIDWTLSS 202
++++ +A + +I++W ++S
Sbjct: 182 GVRAMAQATDAVIGDILNWMVAS 204
>gi|91776721|ref|YP_546477.1| putative lipoprotein [Methylobacillus flagellatus KT]
gi|91710708|gb|ABE50636.1| putative lipoprotein [Methylobacillus flagellatus KT]
Length = 198
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 27/204 (13%), Positives = 66/204 (32%), Gaps = 27/204 (13%)
Query: 12 KIISCSLAVLLCTSL-SSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
+ + + VL ++ SS P++ YD D + L + + +
Sbjct: 6 SMAALLMTVLSLSACMSSIKPDTKPLDFYDF---GLQDADNRISFTLPLEKLDATDAIQH 62
Query: 71 EDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
+I R P ++ S+WS +++ K+ Q +
Sbjct: 63 SNIRYRLHYKHPSQVFAYAESRWSTLPVDLLRQKVANA--------------QPLNTTCG 108
Query: 128 IISAIRSFEI---NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
+ I +F+ + ++ + ++ + L+ + + + + +L
Sbjct: 109 LKIQIVTFDQVFDDASSSQGVVQLQAELTDRRSRKLLASTLISARHAAQSADARGGVAAL 168
Query: 185 NRAFSRISSEIIDW---TLSSLPL 205
N A + + DW T + P
Sbjct: 169 NIASTEALQQAADWARETSQAAPA 192
>gi|134297084|ref|YP_001120819.1| ABC transporter auxiliary component-like protein [Burkholderia
vietnamiensis G4]
gi|134140241|gb|ABO55984.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia vietnamiensis G4]
Length = 207
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 69/203 (33%), Gaps = 9/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L + ++ + +L L + + YDL + + L +
Sbjct: 1 MPRILERALRPAATALALLTLALAAGCAGNSAALSNVRYDLGPAATVGSTGTGS-ALKVL 59
Query: 61 EPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ L+S+ + R S+W+ +++ +L A + G V++
Sbjct: 60 DIAAPDALDSDKFVYRLAYADAQRTAVYRDSRWTAPPAQLLTQRLRAALSSRG---AVLE 116
Query: 118 PNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ G+ A + + FE D + ++ + D ++GQ F +
Sbjct: 117 GSDGVRAP-TLKVDLTEFEQVFDGQSQSHGAVTARATLMQDGKVLGQHTFVSRAPSSTPD 175
Query: 177 KLHFIQSLNRAFSRISSEIIDWT 199
+L A + ++I W
Sbjct: 176 AAGGASALAAASDELVAQIAAWV 198
>gi|221069466|ref|ZP_03545571.1| protein of unknown function DUF330 [Comamonas testosteroni KF-1]
gi|220714489|gb|EED69857.1| protein of unknown function DUF330 [Comamonas testosteroni KF-1]
Length = 227
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 28/211 (13%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
+++ S VL + S YDL + + + P+ + +
Sbjct: 15 RLLGTSSLVLALAACSGLPTAPTQPVRYDLGVADLAAPAANAAAASVAPVPLVLAEVQAP 74
Query: 72 -----------DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+ S +++ ++WS +M++ +L G V+
Sbjct: 75 GLPEGLTAMFYRLNYSDS-QQLRAYQNARWSLPPSQMVEQRLRMRL---GLERPVLSGKD 130
Query: 121 GIY---AD----YQIISAIRSFEINIDRHC---AIITMSLKII---NAHDNSLVGQKVFH 167
+ AD Q+ + F D A++ +S +I + N L+GQKVF
Sbjct: 131 NVRPLLADKRSIAQLRVTVDEFNQVFDSASSSRALLRLSASLIGAGESAGNQLLGQKVFT 190
Query: 168 VEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
VE + Q++ RA ++++ W
Sbjct: 191 VEVPSSSADAAGGAQAMARAVDEAAAQLSRW 221
>gi|187927279|ref|YP_001897766.1| putative lipoprotein [Ralstonia pickettii 12J]
gi|309780021|ref|ZP_07674774.1| lipoprotein [Ralstonia sp. 5_7_47FAA]
gi|187724169|gb|ACD25334.1| putative lipoprotein [Ralstonia pickettii 12J]
gi|308921191|gb|EFP66835.1| lipoprotein [Ralstonia sp. 5_7_47FAA]
Length = 221
Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/210 (14%), Positives = 72/210 (34%), Gaps = 15/210 (7%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
L+ + ++ +L L + S P +YD + + L + +
Sbjct: 4 LSAVFRRACALPALMALSLLAACSSAPVA-PAALYDFGLAPAASAGARLPTALRVADVAG 62
Query: 65 EKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
++ I R S+W + + +L G+ + P
Sbjct: 63 PGWMDGNAIYYRLAYAQGQRTDAYANSRWVESPVSLFDARLRNA--AAGRGQVIGYPTPD 120
Query: 122 IYADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ + + + F DR A ++ + + A ++ Q+V + +
Sbjct: 121 VPS---LRVELVDFSQVFDRPDASRGVVRLRATVSLARG--VIDQRVVQADAPAPSPDAA 175
Query: 179 HFIQSLNRAFSRISSEIIDWTLSSLPLSDN 208
+ +L +A + E++DW ++ LPL+ +
Sbjct: 176 GGVAALTQASDKAIGEVLDW-VAGLPLAAS 204
>gi|113866162|ref|YP_724651.1| ABC-type transporter, auxiliary component [Ralstonia eutropha H16]
gi|113524938|emb|CAJ91283.1| ABC-type transporter, auxiliary component [Ralstonia eutropha H16]
Length = 229
Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 62/205 (30%), Gaps = 19/205 (9%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES-----VQRHIQLIIT 60
+ I + + A L S + N+P YDL R +L +
Sbjct: 27 SAISRLQAALLLAAAGLALSGCALTRGNDPTVTYDLGPPAATTPGNGNPAPARLPKLRVA 86
Query: 61 EPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
+ L+ + R +Q +W R+ +L G +S
Sbjct: 87 QTDGPNWLDGNALFYRLQYAQAQRLQAYATQRWVMSPTRLFDERLREAVAARGTLSWFGD 146
Query: 118 PNQGIYADYQIISAIRSFEINIDR---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + + F+ D ++ + + ++GQ+ F
Sbjct: 147 SSVP-----ALKVDLIEFDQVFDSATTSEGVVRLRATVFQHG---MLGQQTFEARRPAAS 198
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWT 199
+ +++L A + + ++DW
Sbjct: 199 ADGAGGVKALAEASDAVIAALLDWI 223
>gi|107023830|ref|YP_622157.1| ABC-type uncharacterized transport system auxiliary component-like
[Burkholderia cenocepacia AU 1054]
gi|116690916|ref|YP_836539.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia cenocepacia HI2424]
gi|206559098|ref|YP_002229858.1| putative lipoprotein [Burkholderia cenocepacia J2315]
gi|105894019|gb|ABF77184.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia cenocepacia AU 1054]
gi|116649005|gb|ABK09646.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia cenocepacia HI2424]
gi|198035135|emb|CAR51009.1| putative lipoprotein [Burkholderia cenocepacia J2315]
Length = 207
Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 9/165 (5%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLP 95
YDL ++ + L + + L+S+ R + S+W+
Sbjct: 39 YDLGPASSVTTTGSGP-ALKVLDVAAPDALDSDKFAYRLAYADAQHVAVYRDSRWTAPPA 97
Query: 96 RMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIIN 154
+++ +L + G TV++ G+ A + + FE D + ++ +
Sbjct: 98 QLLTQRLRGALSSRG---TVLEGADGVRAP-TLKVDLSEFEQVFDGQSQSHGAVTARATL 153
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
D ++GQ+ F + ++L A + S+I W
Sbjct: 154 MLDGKVLGQRTFVARAPSSTPDAAGGARALAAASDELVSQIAAWV 198
>gi|119897985|ref|YP_933198.1| hypothetical protein azo1694 [Azoarcus sp. BH72]
gi|119670398|emb|CAL94311.1| conserved hypothetical protein [Azoarcus sp. BH72]
Length = 216
Score = 63.8 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/193 (12%), Positives = 56/193 (29%), Gaps = 14/193 (7%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK-YDESVQRHIQLIITEPITEKIL 68
++ I LAV L T S V ++L + + P +
Sbjct: 14 RRLIPGVLLAVALVTGCGSIGKPPRSVASFELGAIEARVLPPGAVPAAVEVRAPSWLESA 73
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+ + P + + S+W M+ L + G + +
Sbjct: 74 QMQYRLAWVEPQQRRSFADSRWIAPPREMLAQALERGLKGAGTAGGSCR----------L 123
Query: 129 ISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ F + D A + + + A +++ + F + + ++
Sbjct: 124 RVELDEFVQDFDSASASTVTLGVRASRLPARGGAVLASRAFQISVPAPSADAAGGARAHR 183
Query: 186 RAFSRISSEIIDW 198
A ++ +I W
Sbjct: 184 AATQQLVDDIGRW 196
>gi|330818437|ref|YP_004362142.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia gladioli BSR3]
gi|327370830|gb|AEA62186.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia gladioli BSR3]
Length = 214
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 75/200 (37%), Gaps = 12/200 (6%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVNI--YDLTE--STKYDESVQRHIQLIITEP 62
+ + + A+LL T L+ C ++ YDL ++ + + + +
Sbjct: 10 SFLSARRAAALGAMLLFTLLAGCAGDAARMSNIRYDLGPLDTSSLALAPASGSVIKVLDV 69
Query: 63 ITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
+++ R I S+W+ +++ +L A G TV++
Sbjct: 70 RAPDAFDTDKFAYRLAYADAQRIATYRDSRWTAPPAQLLTQRLRAALAARG---TVLEGG 126
Query: 120 QGIYADYQIISAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ A + + +FE D + ++++ HD +++GQ+ F +
Sbjct: 127 DAVRASV-LHVELNTFEQVFDGQAQSHGEVAVRATLTHDGAVLGQRSFVARAPASTPDAA 185
Query: 179 HFIQSLNRAFSRISSEIIDW 198
+L A + + ++I+ W
Sbjct: 186 GGASALAAASNELVAQIVAW 205
>gi|53802471|ref|YP_112895.1| putative lipoprotein [Methylococcus capsulatus str. Bath]
gi|53756232|gb|AAU90523.1| putative lipoprotein [Methylococcus capsulatus str. Bath]
Length = 201
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 37/194 (19%), Positives = 72/194 (37%), Gaps = 11/194 (5%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYD---ESVQRHIQLIITEPITE 65
++ ++ SL LL L+ C + Y L+ + +R I L +
Sbjct: 6 MRSTFLTASLGALL---LTGCGTSPD-TRFYVLSAVQEPARALAGQEREIALGVGPVELP 61
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN--QGIY 123
+ L+ I+ R P E+Q +W++ L + L N VV +
Sbjct: 62 EYLDRPQIVTRRDPNELQLAEFDKWAESLKDGVTQVLAENLATRLPSRKVVTYPWKRSAQ 121
Query: 124 ADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
DYQ++ + FE + + S+ + LV + E + + +
Sbjct: 122 VDYQLVVKVTRFEGSGGEAVLSVRWSVSSGDGKTELLV--RESRYAEPAAGTDYRATVAA 179
Query: 184 LNRAFSRISSEIID 197
+NRA +R S ++ +
Sbjct: 180 MNRALARFSRDVAE 193
>gi|311109428|ref|YP_003982281.1| hypothetical protein AXYL_06273 [Achromobacter xylosoxidans A8]
gi|310764117|gb|ADP19566.1| hypothetical protein AXYL_06273 [Achromobacter xylosoxidans A8]
Length = 200
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/194 (12%), Positives = 65/194 (33%), Gaps = 6/194 (3%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
K+ S L + L + P +++DL ++ ++ + + + ++
Sbjct: 3 KMRSAVLILTLALAGCGIGRVAAPPSVFDLGLDSRPAPALPARETIALVFQAVPSLSDTG 62
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
I + +W+ +++ +L G V+ + Q+ +
Sbjct: 63 VIWRVGDSAAPKAYASYRWASPPADLVRQRLTERLSRQGP---VLDERVTLQTP-QLQVS 118
Query: 132 IRSFEI--NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ FE D + + L+ + S++GQ + + +L A
Sbjct: 119 LSQFEQVFAADGQSSEGRVLLQAVLLSGRSVLGQTRIEARAPAPTQDAQGGVTALRLATD 178
Query: 190 RISSEIIDWTLSSL 203
+ ++ W ++L
Sbjct: 179 DAADQLAQWLATTL 192
>gi|241661800|ref|YP_002980160.1| hypothetical protein Rpic12D_0178 [Ralstonia pickettii 12D]
gi|240863827|gb|ACS61488.1| protein of unknown function DUF330 [Ralstonia pickettii 12D]
Length = 221
Score = 63.4 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 65/201 (32%), Gaps = 14/201 (6%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
L+ + ++ +L L + S P +YD + + L + +
Sbjct: 4 LSAVFRRASALPALMALSLLAACSSAPVA-PAALYDFGLAPAASAGARLPTALRVADVAG 62
Query: 65 EKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
++ I R S+W + + +L G+ + P
Sbjct: 63 PGWMDGNAIYYRLAYAQGQRTDAYANSRWVESPVSLFDARLRNA--AAGRGQVIGYPTPD 120
Query: 122 IYADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
+ + + + F DR A ++ + + A ++ Q+V + +
Sbjct: 121 VPS---LRVELVDFSQVFDRPDASRGVVRLRATVSLARG--VIDQRVVQADAPAPSPDAA 175
Query: 179 HFIQSLNRAFSRISSEIIDWT 199
+ +L +A + E++DW
Sbjct: 176 GGVAALTQASDKAIGEVLDWV 196
>gi|307545042|ref|YP_003897521.1| hypothetical protein HELO_2452 [Halomonas elongata DSM 2581]
gi|307217066|emb|CBV42336.1| K09857 hypothetical protein [Halomonas elongata DSM 2581]
Length = 196
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 71/190 (37%), Gaps = 6/190 (3%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ-LIITEPITEKI-LN 69
++ + A L LS C P Y L ++ D+++ + L++ PI L+
Sbjct: 3 RLANLFAASLAALWLSGCATGGTPPTHYTLPDAPLADDAIDASTERLLVIRPIRLARYLD 62
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD--YQ 127
E I+ + I +Q G QW++ L R ++ L + ++ D
Sbjct: 63 VEGIVFQLDDITVQQAKGHQWAEPLGRQLERGLRDRLATRLPDTRIMLDGDTARGDAPLS 122
Query: 128 IISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + F+ D A+ ++ L+ F + LE D +Q+L +
Sbjct: 123 LRLEMDRFQGRHDG-MAVAEGRWQL-RDASGELLALTPFSLTTPLEADGYPALVQALGQD 180
Query: 188 FSRISSEIID 197
R++ +
Sbjct: 181 LDRLADRLAT 190
>gi|189426290|ref|YP_001953467.1| hypothetical protein Glov_3241 [Geobacter lovleyi SZ]
gi|189422549|gb|ACD96947.1| protein of unknown function DUF330 [Geobacter lovleyi SZ]
Length = 199
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 75/193 (38%), Gaps = 11/193 (5%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI-QLIITEPITEKI 67
+K + + + L+ C Y LT + + I ++
Sbjct: 3 VKPLLAAIVYGLTGLLVLAGCGRSPQ-TTFYTLTPLVAEMTIPRVTGPSIAIASVTLPEL 61
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKL----PRMIQLKLIANFENNGKISTVVKPNQGIY 123
++ ++V + + L +W++ L PR++ I+ N+ ++S +
Sbjct: 62 IDRPQLVVPDAGTRVAILESHRWAEPLKSAIPRLLADN-ISRLMNSDRVSAYPQHAAN-S 119
Query: 124 ADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
ADY++ ++ FE+ + ++ +I +A D V + + E + + +
Sbjct: 120 ADYRLFVDLQRFELT--GNTVVVDALWEIRSAKDTRPVTGRS-KMVETIGSADYEAVVAG 176
Query: 184 LNRAFSRISSEII 196
+RA + +S E++
Sbjct: 177 YSRAVAALSKEMV 189
>gi|34498001|ref|NP_902216.1| hypothetical protein CV_2546 [Chromobacterium violaceum ATCC 12472]
gi|34103857|gb|AAQ60217.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
12472]
Length = 197
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 65/181 (35%), Gaps = 5/181 (2%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSS 78
AV L +L+ C Y L Q ++++ L+ +++
Sbjct: 8 AVFLAAALAGCASPQ--SRFYGLDAPAAPQAQAQFGKRVLLGPVSLPAALDRPQLVLDMG 65
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI--YADYQIISAIRSFE 136
E++ +WS L R++ +L +++V Q + +I +R
Sbjct: 66 GGELKLQEFDRWSAPLDRLLAQRLSLGVARASGVASVYAYPQPGMDGGELRIAVDVRGLS 125
Query: 137 INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
+ + A + + ++ NA D ++ + F + + D + L ++++I
Sbjct: 126 LKPGQGAA-LEAAWQLQNAADGRILARGGFSRSQPVASDQPGALLAGLQTLLDGLAADIA 184
Query: 197 D 197
Sbjct: 185 A 185
>gi|300115317|ref|YP_003761892.1| hypothetical protein Nwat_2813 [Nitrosococcus watsonii C-113]
gi|299541254|gb|ADJ29571.1| protein of unknown function DUF330 [Nitrosococcus watsonii C-113]
Length = 209
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 67/184 (36%), Gaps = 10/184 (5%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ---LIITEPITEKILNSEDIIVR 76
+ L +C + +Y LT +T S + H+ LI+ + L I+
Sbjct: 1 MAAVFMLGACATTHPQPWLYSLTTATSPAPSNETHVARTALIMNPIHAAEFLQHAGIVYE 60
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY---QIISAIR 133
++P + +W+D L + + + ++ V A Q+
Sbjct: 61 TAPHRLNVARQHRWADPLTVQLHQYIYNSLTR--QLPAVAVYPNTGNAPLKAWQLTVEFN 118
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
SF D A++ ++ D +V Q F+ L +D + +L++ +RI+
Sbjct: 119 SFHGRFDGK-ALVAGGWRL-RNGDGGVVAQGSFNQAIPLTEDGYEALVAALSKGLARIAD 176
Query: 194 EIID 197
I
Sbjct: 177 SIAG 180
>gi|261211868|ref|ZP_05926155.1| putative lipoprotein [Vibrio sp. RC341]
gi|260839218|gb|EEX65850.1| putative lipoprotein [Vibrio sp. RC341]
Length = 192
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 74/183 (40%), Gaps = 7/183 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKY--DESVQRHIQLIITEPITEKI-LNSEDII 74
L +LL T C P N + L + D + +++ L+I +P+ L+++ I+
Sbjct: 5 LLMLLATLFVGCSSTPQPKNHFYLLPNNPALSDVNQNKNLPLLIVQPVELAAYLDTQGIV 64
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI--YADYQIISAI 132
R S ++ +QW+ +L + ++I N + I ++
Sbjct: 65 YRKSETQVIQARQNQWAQRLSSQLTQRVINELRKNSTPYWPTALDTAIAQQKHARLQVRF 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
+ F + + A I S + NA + + F + L + +++L+ ++++
Sbjct: 125 QQFNGSYTGN-AEIAGSWVLFNAQGERSL-SQEFSFQIPLADEGYPALVEALSLGLAQLA 182
Query: 193 SEI 195
+I
Sbjct: 183 VQI 185
>gi|254247081|ref|ZP_04940402.1| ABC transporter [Burkholderia cenocepacia PC184]
gi|124871857|gb|EAY63573.1| ABC transporter [Burkholderia cenocepacia PC184]
Length = 212
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 60/165 (36%), Gaps = 9/165 (5%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLP 95
YDL ++ + L + + L+S+ R + S+W+
Sbjct: 44 YDLGPASSVTTTGSGP-ALKVLDVAAPDALDSDKFAYRLAYADAQHVAVYRDSRWTAPPA 102
Query: 96 RMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIIN 154
+++ +L + G TV++ G+ A + + FE D + ++ +
Sbjct: 103 QLLTQRLRGALSSRG---TVLEGADGVRAP-TLKVDLSEFEQVFDGQSQSHGAVTARATL 158
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWT 199
D+ ++GQ+ F + ++L A + S+I W
Sbjct: 159 MLDSKVLGQRTFVARAPSSTPDAAGGARALAAASDELVSQIAAWV 203
>gi|237747197|ref|ZP_04577677.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
gi|229378548|gb|EEO28639.1| conserved hypothetical protein [Oxalobacter formigenes HOxBLS]
Length = 200
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 33/192 (17%), Positives = 70/192 (36%), Gaps = 20/192 (10%)
Query: 19 AVLLCTSLSSCFFHNN--PVNIYDLTESTKYDESV-QRHIQLIITEPITEKILNSEDIIV 75
VL + L++C F + P +YDL + S + +I T+ + +N +
Sbjct: 11 TVLAVSLLTACAFGDRRPPATLYDLGPLKTENLSRLPAGMPVISTKVHAPEWMNENLMFY 70
Query: 76 R---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY---ADYQII 129
R + ++++ S W+ R+ + +L + + GI +
Sbjct: 71 RLDYVNDQQVRFYTESSWNSPPSRLFKNRL------DTYLVAAGSTVTGIRTSSPTLTLR 124
Query: 130 SAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ F + + I + + D LV QK F E + ++L +
Sbjct: 125 IYLEDFSQHFSSPSDNTSRIVLRASLFRGRD--LVAQKRFRKEVVSRTADAQGGARALAQ 182
Query: 187 AFSRISSEIIDW 198
+ + EI++W
Sbjct: 183 SSDELIVEIMNW 194
>gi|317401490|gb|EFV82122.1| hypothetical protein HMPREF0005_00961 [Achromobacter xylosoxidans
C54]
Length = 203
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 64/202 (31%), Gaps = 8/202 (3%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL--TESTKYDESVQRHIQLIITEPITEK 66
++ I + +LA+ L + P ++DL + + L+
Sbjct: 3 MRSAIQALALALTLALAGCGVGRVGAPPAVFDLGLDARPAPQLPAREPMALVF---SAVP 59
Query: 67 ILNSEDIIVRSSPIEI-QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
L+ +I R Q +W+ +++ +LI G + Q
Sbjct: 60 ALSGTGVIWRVGDSAAPQSYATYRWASSPSDLVRQRLIERLSRQGPVLAERASGQTPQLQ 119
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ + F + + + ++N + +VGQ + + + +L
Sbjct: 120 VYLSQFEQVFTPDGSASEGRVLLQAVLLNGRN--VVGQVRIATQAPAPTQDAAGGVAALR 177
Query: 186 RAFSRISSEIIDWTLSSLPLSD 207
+A + ++ W S +
Sbjct: 178 QATDDAADQLAQWLASQPKAAA 199
>gi|74316268|ref|YP_314008.1| putative lipoprotein [Thiobacillus denitrificans ATCC 25259]
gi|74055763|gb|AAZ96203.1| putative lipoprotein [Thiobacillus denitrificans ATCC 25259]
Length = 225
Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/202 (11%), Positives = 68/202 (33%), Gaps = 14/202 (6%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ----------RHIQLIITE 61
+ + +LA+ C S ++ Y L + D + L++ +
Sbjct: 6 GVTALALALTGCISFDGRGSAAPTIH-YVLDDVVPADTAAPPAGRAADAGVTPRTLLVLD 64
Query: 62 PITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
+ N++ ++ +P Y ++W+++ + L + + G V +
Sbjct: 65 TTSSGFYNNDQLVFSRTPGTRGYYQFARWTERPGKRFADLLRSRLDRLGGYR-VAAASGQ 123
Query: 122 IYADYQIISAIRSFEINIDRHCAII--TMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ D + + + F + + + +++ +L+ ++VF + +
Sbjct: 124 VRGDLLLDTELIEFYHDARSQPGEVHLLLRADLLDLKRRTLLDRRVFEQRVPVATYDAAG 183
Query: 180 FIQSLNRAFSRISSEIIDWTLS 201
+ A ++ W S
Sbjct: 184 AAAASGVAVGHTLDQLAAWLAS 205
>gi|301059990|ref|ZP_07200864.1| conserved hypothetical protein [delta proteobacterium NaphS2]
gi|300445869|gb|EFK09760.1| conserved hypothetical protein [delta proteobacterium NaphS2]
Length = 207
Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 30/203 (14%), Positives = 75/203 (36%), Gaps = 14/203 (6%)
Query: 6 NKIIKKKIISCSLAVLLCT---SLSSCFFHNNPVNIYDLT----ESTKYDESVQRHIQLI 58
KI+K+ SCS+ ++C L +C N+P Y L + ++ + ++
Sbjct: 1 MKILKELGHSCSMWGMVCVLSVILVACAGTNSPSTFYMLRSMEGPQESLTSADEKSVSVL 60
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE---NNGKISTV 115
+ + L+ ++ + ++ ++W++ L L+ + ++
Sbjct: 61 VGPISMPEYLDRNQMVTVAGKNQVDLDEFNRWAESLRESFYRVLLEDLSFLLKTPRVYRY 120
Query: 116 VKPNQGIYADYQIISAIRSFEINIDRHCAIITM-SLKIINAHDNSLVGQKVFHVEEKLEK 174
+ + ADYQ+ + F+ + + ++ + + + + VF +
Sbjct: 121 DRSGED-DADYQVSVDVTRFDCAPEGDAVLTVFWTVHGKDKGTSGIAKKSVFRT--PVSS 177
Query: 175 DNKLHFIQSLNRAFSRISSEIID 197
+ +LNR S EI
Sbjct: 178 SGFPGMVDALNRTLSAFGREIAT 200
>gi|71906848|ref|YP_284435.1| putative lipoprotein [Dechloromonas aromatica RCB]
gi|71846469|gb|AAZ45965.1| putative lipoprotein [Dechloromonas aromatica RCB]
Length = 201
Score = 61.1 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/193 (13%), Positives = 70/193 (36%), Gaps = 15/193 (7%)
Query: 14 ISCSLAVLLCTSLSSCFFHNN-----PVNIYDLTES--TKYDESVQRHIQLIITEPITEK 66
+ +AVLL LS+CF P+ IYD + ++ + L + P+
Sbjct: 1 MRWLVAVLLGLCLSACFTAGKRGGDTPLAIYDFGPPLSSLLPAPRKQPVALEVRAPLWFD 60
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
L + + ++ ++W+ ++IQ +L + ++ V+
Sbjct: 61 SLGIDYRLTYVEASRLREYAQARWAGPPAQLIQQRL------SQRLGYVMAGQGQTRCLV 114
Query: 127 QI-ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
++ I+ D ++ +++ V + +E+ + +++L
Sbjct: 115 RLEITEFSQLFAAADSSRGVLQGRAWLLD-RSRRQVAELALSLEKPAPSADARGGVEALT 173
Query: 186 RAFSRISSEIIDW 198
+++ ++ W
Sbjct: 174 LTVEQLAIDLFAW 186
>gi|83593783|ref|YP_427535.1| hypothetical protein Rru_A2448 [Rhodospirillum rubrum ATCC 11170]
gi|83576697|gb|ABC23248.1| Protein of unknown function DUF330 [Rhodospirillum rubrum ATCC
11170]
Length = 201
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 68/194 (35%), Gaps = 9/194 (4%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ---LIITEPIT 64
+ + + + L++C P +Y L + + + I
Sbjct: 5 FTPSRRLRLLIVSAMALGLAACGLSGPPPTLYVLGQPQSVATAAPLGGDRPVIEIKPVRV 64
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI-- 122
L++ D++VR P I +W+++L +Q L A+ ++ ++ Q
Sbjct: 65 SDYLDTTDLVVR-GPDRIIPSQQGRWAERLSVGVQRALAASLGA--RLPGLILTTQPPID 121
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
Q++ + FE I+ I+T I + V V L +Q
Sbjct: 122 RPARQLLVDVSGFEA-IEGGSVILTARWTIADGASRQSVVSNGAQVTVPLTTAGDAGVVQ 180
Query: 183 SLNRAFSRISSEII 196
++++A ++ I
Sbjct: 181 AMSKAVDELAGHIA 194
>gi|118578846|ref|YP_900096.1| hypothetical protein Ppro_0404 [Pelobacter propionicus DSM 2379]
gi|118501556|gb|ABK98038.1| protein of unknown function DUF330 [Pelobacter propionicus DSM
2379]
Length = 203
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 17/196 (8%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ----RHIQLIITEPITEKI 67
+ + V+ L+ C Y L+ R + L I
Sbjct: 6 NLPRTLILVIATIWLAGCARSPQ-ARFYTLSPLGPQAAKPPASAVRQVSLSIAPVEVPDY 64
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE---NNGKISTVVKPNQGIYA 124
LN I+ RS E++ +W+ LP I + N + ++ + + A
Sbjct: 65 LNRPQIVTRSGQNELKLAEFDRWAGSLPDNIAAVMAENLSLLLASDRVQAAPR-GRNEKA 123
Query: 125 DYQIISAIRSFEINIDRHCAIITMSLKI---INAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
DY + I + +S+++ ++A D + V +V EKL+ +
Sbjct: 124 DYTLAMRILRLDCVPGDQ-----LSMRVQWTLSAADGTCVAARVSTCMEKLKDSRYDTLV 178
Query: 182 QSLNRAFSRISSEIID 197
+++ A ++S EI
Sbjct: 179 AAVSSALGQVSREIAR 194
>gi|187478578|ref|YP_786602.1| lipoprotein [Bordetella avium 197N]
gi|115423164|emb|CAJ49695.1| putative lipoprotein [Bordetella avium 197N]
Length = 216
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/170 (13%), Positives = 67/170 (39%), Gaps = 7/170 (4%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQYLIGSQW 90
+ P Y L ++ P+ + I++R+ I L +W
Sbjct: 21 ASPPARYYTLQAPPAATPIKGDAGFMVEVLPVAVTPQADQPQIMLRTGTGSIAPLYSDRW 80
Query: 91 SDKLPRMIQLKLIANFENN-GKI-STVVKPNQGIYADYQIISAIRSFEINIDRHCAI-IT 147
S L ++ L+ + G + + V++P G +++ + ++ F+++ + +T
Sbjct: 81 SAPLGDELRSALVDGLTRDLGALDAGVLRPPLG-TPLWRVQTDVQRFDMSDKGPTVLDVT 139
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
++ ++ +L+ + V V + ++ + + +A + ++ I
Sbjct: 140 WRVRPVSLKGGALLCRTV--VTMPVGAEDVASLVTAQQQAVALLARTIAS 187
>gi|251789295|ref|YP_003004016.1| hypothetical protein Dd1591_1684 [Dickeya zeae Ech1591]
gi|247537916|gb|ACT06537.1| protein of unknown function DUF330 [Dickeya zeae Ech1591]
Length = 186
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 61/177 (34%), Gaps = 9/177 (5%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTK---YDESVQRHIQLIITEPITEKILNSEDIIVRSS 78
L L +C Y L + + QL + L I+ ++S
Sbjct: 8 LVLLLGACSSPQKVY--YQLPVAVPNTHLSATSTDARQLWVAPVTLTDSLAGNGIVFQTS 65
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEIN 138
+ + W+ L + +Q L A+ N VV A ++ + +F+
Sbjct: 66 AVRYTIASNNLWAGPLDQQLQQALAASLRNGLPGWHVVSQGAANAAASRLQVNVTAFQGR 125
Query: 139 IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D A+I + D + + F +E +D + +L + + +++ ++
Sbjct: 126 FDGK-AVIRGEWVL---QDGKRMTTQPFSIEVPQTEDGYDALVAALGKGWQQVAEQV 178
>gi|91786144|ref|YP_547096.1| putative lipoprotein [Polaromonas sp. JS666]
gi|91695369|gb|ABE42198.1| putative lipoprotein [Polaromonas sp. JS666]
Length = 237
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/211 (13%), Positives = 65/211 (30%), Gaps = 26/211 (12%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS----- 70
A L+ SS +YD R L P+ + +
Sbjct: 31 SVAATLVLGGCSSLPDKPTRATMYDFGPGALSLRPGTREAPL---PPLAIDDIGTSGGAL 87
Query: 71 EDIIVR-----SSPIEIQYLIGSQWSDKLPRMIQLKLIANFE------NNGKISTVVKPN 119
+++ V + +++ ++WS ++I+ +L N G+ + + +
Sbjct: 88 DNMAVLYRLGYADAQQLRPYSQARWSMPPAQLIRQRLREQLSQRRAVFNAGESAALNRTQ 147
Query: 120 QGIYADYQIISAIRSFEINIDRHCA---IITMSLKIINA--HDNSLVGQKVFHVEEKLEK 174
+ + + F A +I + ++ LV Q+ V+
Sbjct: 148 NAVLPQL-LRLHLEEFSHLFTAPDASVGLIRLRATLVEVTPAGEKLVAQRHVIVQRPAPS 206
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
+ +++L A E+ W L P
Sbjct: 207 ADAPGGVRALTAATDAAIEELEQW-LQQAPA 236
>gi|186474977|ref|YP_001856447.1| hypothetical protein Bphy_0208 [Burkholderia phymatum STM815]
gi|184191436|gb|ACC69401.1| protein of unknown function DUF330 [Burkholderia phymatum STM815]
Length = 208
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/203 (13%), Positives = 71/203 (34%), Gaps = 10/203 (4%)
Query: 1 MDKKLNKI-IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLII 59
M + +N++ + ++ L L + YDL + + + +
Sbjct: 1 MSRSINRLFTSRAALAAVLVALGALAGCVGNPAAISDYRYDLGPAPTPGSTGTMP-AIKV 59
Query: 60 TEPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
+ LN++ ++ R + S W+ +++ +L + G TV+
Sbjct: 60 LDVTAPATLNTDKLVYRLPYADAQQTAAYANSHWTMPPAQLLTQRLRNALSSRG---TVL 116
Query: 117 KPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175
+ G+ A + + FE + D + +++ + + GQ+ F
Sbjct: 117 TGSDGVSAPV-LKVDLDVFEQDFDGQSQSHASVTARATLLVGGKVAGQRTFIARAPASSA 175
Query: 176 NKLHFIQSLNRAFSRISSEIIDW 198
+ ++L A + ++I W
Sbjct: 176 DAAGGARALAAASDELVAQISAW 198
>gi|118474113|ref|YP_891671.1| hypothetical protein CFF8240_0476 [Campylobacter fetus subsp. fetus
82-40]
gi|28974224|gb|AAO64225.1| hypothetical protein Cf0019 [Campylobacter fetus]
gi|118413339|gb|ABK81759.1| conserved hypothetical protein [Campylobacter fetus subsp. fetus
82-40]
Length = 178
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 68/180 (37%), Gaps = 18/180 (10%)
Query: 19 AVLLCTSLSSCFFHNNPVNIY-DLTESTKYDESVQRH--IQLIITEPITEKILNSEDIIV 75
A+ + LS C +P Y +L+ K R + + + + + + +II
Sbjct: 6 AIFISILLSGCLAKQSPQTTYYELSTPKKELNRCDRRSDVFIHVQKIKSLSPYQTRNIIY 65
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ +E+ YL ++ MI LI + N I +D Q+ I
Sbjct: 66 K-DGLELSYLQNVKFIAYPSDMIYKALILYLDQNCHIKE--------RSDAQVSLEITLL 116
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+I + ++ A I + K+ + + ++ K+ + ++LN + + ++
Sbjct: 117 DIGVTQNTAYIEILAKLTD--KDKIILNKILSAKT----TTTSSVAEALNASLETVFGDL 170
>gi|307728304|ref|YP_003905528.1| hypothetical protein BC1003_0233 [Burkholderia sp. CCGE1003]
gi|307582839|gb|ADN56237.1| protein of unknown function DUF330 [Burkholderia sp. CCGE1003]
Length = 213
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/208 (13%), Positives = 73/208 (35%), Gaps = 15/208 (7%)
Query: 1 MDKKLNKIIKKKIISCSLAVL----LCTSLSSCFFHNNPVN--IYDLTESTKYDESVQRH 54
M + + +++ ++ S A + ++ C ++ YD + +
Sbjct: 1 MSRSIRRLLSSRVTRASAACAALAAVGVLVAGCTSTPAALSDIRYDFGPPKPATPAGMQP 60
Query: 55 IQLIITEPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGK 111
+ + + + L S+ ++ R ++ S W+ ++ +L + G
Sbjct: 61 -TVKVLDVSAPEALQSDKLVYRLGYADSQQVAAYANSHWTMPPSVLLTQRLRGALSSRG- 118
Query: 112 ISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEE 170
TV+ G+ A + + FE D + ++ + + L+GQ+ F
Sbjct: 119 --TVLTGADGVAAPV-LKIDLSEFEQVFDSQSQSHAAVTARATLMQNGKLIGQRTFISRA 175
Query: 171 KLEKDNKLHFIQSLNRAFSRISSEIIDW 198
+ Q+L A + ++I W
Sbjct: 176 PSRSADAAGGAQALAAASDDLVAQIGAW 203
>gi|152992582|ref|YP_001358303.1| hypothetical protein SUN_0989 [Sulfurovum sp. NBC37-1]
gi|151424443|dbj|BAF71946.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 191
Score = 59.6 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/173 (14%), Positives = 60/173 (34%), Gaps = 11/173 (6%)
Query: 27 SSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
C + Y L T + + + K L +I V S ++ ++
Sbjct: 16 GGCGTSS----YYVLSTAPQPTTTYSHIRGAIGVEKVSVPKYLFKREIAVAKSNSQVTFI 71
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI--YADYQIISAIRSFEINIDRHC 143
G+ W++ + + +LI + V G+ ++ I F DR
Sbjct: 72 SGANWAEDVDEGLTQRLIGYLQKKFNKPEVYSYPWGVSSQPRIKVKVQISRFIAQGDR-- 129
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
+ S+++ N + K+F + + ++++AF ++ ++
Sbjct: 130 VYLDASIRLENMQTSK-RKAKLFSTSVP-SGSSAASIVAAMDKAFDQLEEQVA 180
>gi|77166181|ref|YP_344706.1| hypothetical protein Noc_2723 [Nitrosococcus oceani ATCC 19707]
gi|254435218|ref|ZP_05048725.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
gi|76884495|gb|ABA59176.1| Protein of unknown function DUF330 [Nitrosococcus oceani ATCC
19707]
gi|207088329|gb|EDZ65601.1| conserved hypothetical protein [Nitrosococcus oceani AFC27]
Length = 211
Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 68/186 (36%), Gaps = 9/186 (4%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKY----DESVQRHIQLIITEPITEKILNSEDI 73
+ V + LS+C + +Y LT E+ LI+ + + L I
Sbjct: 7 ILVAVAFILSACATTPHQPWLYSLTTPPAGTTPPSEARVARKALIVNQIYAAEFLQHSGI 66
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF--ENNGKISTVVKPNQGIYADYQIISA 131
+ +++P + +W+ L + + + + + A +Q+
Sbjct: 67 VYKTAPNRLSVARQHRWAAPLTVQLHQYIYNRLTTQLPSIAVYPNTSSAPLKA-WQLTVE 125
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
SF D A++ S ++ + +V Q F + L +D + +L++ +R+
Sbjct: 126 FNSFHGRFDGK-AVVAGSWRL-RNGNGDVVAQSSFKQDTPLAEDGYEALVAALSKGLARV 183
Query: 192 SSEIID 197
+ I
Sbjct: 184 TDSIAS 189
>gi|261855959|ref|YP_003263242.1| hypothetical protein Hneap_1361 [Halothiobacillus neapolitanus c2]
gi|261836428|gb|ACX96195.1| hypothetical protein Hneap_1361 [Halothiobacillus neapolitanus c2]
Length = 218
Score = 58.8 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/197 (12%), Positives = 68/197 (34%), Gaps = 10/197 (5%)
Query: 11 KKIISCSLAVLLCTSLSSCFF---HNNPVNIYDLTESTKYDESVQRHIQ-----LIITEP 62
K I S ++ + +L+SC N++ ++ + + P
Sbjct: 8 KTIASLAMLSIFSATLASCSLPIRAPEQQNVFRFNSPNIQTPTIDSTSSESAFLIQMRTP 67
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
+ N++ ++ + + S+W M+ + ++ VV +
Sbjct: 68 RAAEGFNTQSMMYSRDALNLAPYRDSRWLATPAHMLGDVIEQTLLKQPWVAGVVPNSANA 127
Query: 123 YADYQIISAIRSFEINIDR--HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ + E +ID A + MS ++ + G F + + +++ F
Sbjct: 128 PVAANLSCRLIRLEHDIDGSTGKAHLVMSCLWTTPANHEVQGHLRFDQTQAITRNDATGF 187
Query: 181 IQSLNRAFSRISSEIID 197
+ + ++ ++II+
Sbjct: 188 ATASQQLVNQAVTQIIN 204
>gi|260431687|ref|ZP_05785658.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260415515|gb|EEX08774.1| conserved hypothetical protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 185
Score = 58.4 bits (140), Expect = 5e-07, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 61/181 (33%), Gaps = 6/181 (3%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVR 76
++ VL LS+C N+P Y ++ + R + + + DI+ +
Sbjct: 5 AILVLPIALLSACSGANDPR--YLISAPPGERTANLRSRTIEVRQVSLPAYAAGSDIVAQ 62
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ +QW+D R + L E G D ++ +
Sbjct: 63 GEGGALFTQDRAQWADDPARGMTSALARGLSERTGASVAAEPWPLNTGPDVRLDVRVDQA 122
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVG-QKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
D + + +++ + ++ + F++ + +L RA + +S +
Sbjct: 123 YARADGNFELSGQYA--VSSPEGTVREFVRRFNIVTPIAGSGAPATADALGRALAELSRQ 180
Query: 195 I 195
I
Sbjct: 181 I 181
>gi|303246828|ref|ZP_07333105.1| protein of unknown function DUF330 [Desulfovibrio fructosovorans
JJ]
gi|302491845|gb|EFL51725.1| protein of unknown function DUF330 [Desulfovibrio fructosovorans
JJ]
Length = 212
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 70/198 (35%), Gaps = 16/198 (8%)
Query: 19 AVLLCTSLSSCFFHNNPVNIY---DL-TESTKYDESVQRHIQLIITEPITEKILNSEDII 74
+++L SL+ CF P Y DL + Q+ + L I + L+
Sbjct: 14 SLILAASLAGCFGKPPPPQQYLRVDLGQGPCPGSANAQQRLPLGIKPLKALENLD--RTA 71
Query: 75 VRSSPI-----EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
V ++ +QY W ++ L E T V + D +
Sbjct: 72 VLTAHDNVLTASLQYY----WEGAPQDLVGQALRHGIECQSASLTPVDYQPRVTHDAVLT 127
Query: 130 SAIRSFEIN-IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ +F ++ D ++++ L + + + + + F+ L+ + + + A
Sbjct: 128 GQLTAFNVDETDGGRFVVSIHLDLWSRNLGTRISSGDFNAYAPLDNFSGDAVANAASDAL 187
Query: 189 SRISSEIIDWTLSSLPLS 206
RI +++ W LP
Sbjct: 188 GRIVPKVVAWLDGGLPRI 205
>gi|222823164|ref|YP_002574737.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
gi|222538385|gb|ACM63486.1| conserved hypothetical lipoprotein [Campylobacter lari RM2100]
Length = 197
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/197 (18%), Positives = 78/197 (39%), Gaps = 11/197 (5%)
Query: 14 ISCSLAVLLCTSLSSCFFHNN-PVNIY---DLTESTKYDESVQRHIQLIITEPITEKILN 69
+ SL + ++ S P N Y DL E ++ ++ ++++ P
Sbjct: 4 LYISLIAIFFSACSLVSPSQTLPANKYFSIDL-EKLGQSQNKVKNSTIMVSLPKGLAY-- 60
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+ +I + + W + MI+ L + ++ G V+ + ADY +
Sbjct: 61 TNEIFYK-KDHVVNAYAYHFWKENPALMIKAFLEFHLQDLGVFKAVLNQDSLASADYVLE 119
Query: 130 SAIRSFEINI-DRHCAIIT--MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
S + E + D + I ++L ++ + L+ K F+ E++L +N IQ+ +
Sbjct: 120 SKVDILEQDFSDEMHSKIKLGINLNLVQINTKKLIVSKYFYYEKELNDNNPQILIQNYDE 179
Query: 187 AFSRISSEIIDWTLSSL 203
F + + W +L
Sbjct: 180 VFLLFAKDFRVWIDQNL 196
>gi|331001494|ref|ZP_08325112.1| conserved domain protein [Parasutterella excrementihominis YIT
11859]
gi|329568223|gb|EGG50040.1| conserved domain protein [Parasutterella excrementihominis YIT
11859]
Length = 146
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 2/133 (1%)
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
+S V I +++S +I L ++ G + V+ PN Y
Sbjct: 5 PYDSTRCYVLIKDNRIYNTDINRFSSNPGNLIGDGLREVIQDCGPWNIVLSPNSISTPAY 64
Query: 127 QIISAIRSFEINIDRHC--AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
Q+ + F IN + A++ M + ++ + LV + + + D+ + +
Sbjct: 65 QLTVFVSKFFINAVKKPFAAVVEMEVSVVASVSGKLVFHETYSQTQNTPTDDMPGAVSAF 124
Query: 185 NRAFSRISSEIID 197
+ I + +
Sbjct: 125 DVCLENIFKTLTN 137
>gi|307825465|ref|ZP_07655683.1| putative lipoprotein [Methylobacter tundripaludum SV96]
gi|307733351|gb|EFO04210.1| putative lipoprotein [Methylobacter tundripaludum SV96]
Length = 181
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 26/197 (13%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDI 73
+ C L L + C ++D S + Q + I P L I
Sbjct: 1 MRCLLIGWLVFLSAGCSVTVRQPVLHDFGVSVS-TATQQSKASVSINAPT---WLWDNRI 56
Query: 74 IVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
R SSP ++++ +W P M + L G DY +I
Sbjct: 57 RYRLLFSSPSQVRFYGLDRWIASPPEMFEQLL---------------NLSGKTKDYALII 101
Query: 131 AIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ FE D ++ S++ ++ +G + F+++ + + I
Sbjct: 102 RFQDFEQQFDAPDRARVVLRFSVEAYADNNKQKIGTQEFYLQRPTQTPDAAGAISGFIDL 161
Query: 188 FSRISSEIIDWTLSSLP 204
I DW ++ LP
Sbjct: 162 VHEAVENIRDW-VAGLP 177
>gi|283852495|ref|ZP_06369763.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B]
gi|283572103|gb|EFC20095.1| conserved hypothetical protein [Desulfovibrio sp. FW1012B]
Length = 211
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 35/200 (17%), Positives = 70/200 (35%), Gaps = 12/200 (6%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIY---DLTEST-KYDESVQRHIQLIITEPITEKILNS 70
++ LL SLS CF P Y DL E+ S Q + L + L+
Sbjct: 9 RLAIVALLAASLSGCFGKPPPPQRYLRVDLEETPCPGSNSQQHRLPLGFKPLTALENLDR 68
Query: 71 EDIIVRSSP---IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
++ ++Y W ++ L E T V + D
Sbjct: 69 TSVLTARDQVLSASLEYY----WEGAPQDVVGQALRRGIECQSTAVTPVDYQPRVEHDAV 124
Query: 128 IISAIRSFEIN-IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ + +F + + ++++ L + + + + + F+ LE N ++ +
Sbjct: 125 LTGQVTAFNVEETEGGRFVVSVHLDLWSKNLGTRIATGEFNAYAPLENFNGDTIARAASN 184
Query: 187 AFSRISSEIIDWTLSSLPLS 206
A R+ +++DW LP
Sbjct: 185 ALGRVVPKVVDWLDVGLPKI 204
>gi|89902673|ref|YP_525144.1| putative lipoprotein [Rhodoferax ferrireducens T118]
gi|89347410|gb|ABD71613.1| putative lipoprotein [Rhodoferax ferrireducens T118]
Length = 234
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/222 (11%), Positives = 73/222 (32%), Gaps = 32/222 (14%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--------L 57
++ + + L V L + + +YD + Q L
Sbjct: 10 SRAYSTEARALFLVVFLALTGCALTRPTARPAVYDFGPGRLSSAPAPQAGQVAASALAPL 69
Query: 58 IITEPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST 114
++ E L+ ++ R ++ +++ ++WS ++++ +L G+
Sbjct: 70 VLDEVQASSALDGSAVLYRLAYTNAQQLRPYAQARWSMPPAQLVRQRLREQL---GQDRA 126
Query: 115 VVKPNQGIYA-------------DYQIISAIRSFEINIDRHCAII---TMSLKIINA--H 156
+++P + A + + F + + + + + A
Sbjct: 127 LLEPGAVVSAARLSTPGALAGVTPITLRLELEEFSQLFEAPGSSVGLLRLRATLTQASPS 186
Query: 157 DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
L+ Q++ V+ + + +Q+L A + E+ W
Sbjct: 187 GAGLLAQRIIVVQRPAPSADAVGGVQALRLATDAAAQELAQW 228
>gi|217970675|ref|YP_002355909.1| hypothetical protein Tmz1t_2274 [Thauera sp. MZ1T]
gi|217508002|gb|ACK55013.1| protein of unknown function DUF330 [Thauera sp. MZ1T]
Length = 212
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 24/196 (12%), Positives = 54/196 (27%), Gaps = 16/196 (8%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKILN 69
++ +C LL + YDL T ++ ++ P +
Sbjct: 13 PRLSACIATALLVAACQVLPERPRAAATYDLGTGERAALAHGLAPARVAVSSPPWLQTTT 72
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
R P + ++W+ P M+ L L G ++
Sbjct: 73 MHYRDARVDPGRRRAYADNRWAAPPPAMLGLVLERTL------------GAGEGGGCRLQ 120
Query: 130 SAIRSFEINI-DRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ FE + + + ++ +++ V E + +
Sbjct: 121 VQLDEFEQVFTAGERSEARLLARFALLPVRGAAVIASASLVVAEPATTADASGGASAFRA 180
Query: 187 AFSRISSEIIDWTLSS 202
A R++ I W +
Sbjct: 181 ATERLALAIAQWIAET 196
>gi|89076555|ref|ZP_01162865.1| hypothetical protein SKA34_10760 [Photobacterium sp. SKA34]
gi|89047789|gb|EAR53387.1| hypothetical protein SKA34_10760 [Photobacterium sp. SKA34]
Length = 190
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 64/186 (34%), Gaps = 6/186 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ-RHIQLIITEPITEKI-LNSEDI 73
L + + + C + Y L T + + + L+I P+ L +
Sbjct: 4 WLLIAAVVLAGTGCSSTETALKTYMLPMPTSANTAHNISNKSLLIVRPVEVAAHLAGTGL 63
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISA 131
+ ++SP EI + W + L + ++ + +T + P ++
Sbjct: 64 VYQTSPTEIVEAQQNLWGESLSTQLTRRITFDLRQKQTQFWATQLTPTLSTAGIPRLQVR 123
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
I F A I +IN + L F L KD +++L++ +
Sbjct: 124 INQFNGVYSG-VAEIAGEWLLING-NGDLQTVHPFSFRVPLTKDGYSAQVEALSKGVDEL 181
Query: 192 SSEIID 197
++++
Sbjct: 182 TTQLAR 187
>gi|77920342|ref|YP_358157.1| hypothetical protein Pcar_2752 [Pelobacter carbinolicus DSM 2380]
gi|77546425|gb|ABA89987.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 215
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 57/179 (31%), Gaps = 8/179 (4%)
Query: 25 SLSSCFF-HNNPV--NIYDLTESTKYDESVQRHIQLIITEP-ITEKILNSEDIIVRSSPI 80
L C P Y +T + + + ++ P N + R
Sbjct: 18 LLPGCMRIGQRPPAKTSYVITANRPASAAERVGAAVLQVTPMRISPRFNGRSFVYRQGIS 77
Query: 81 EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI- 139
+ + +++ ++Q +++ +G +TV + DY + I +
Sbjct: 78 QFRPDFYNKFLVAPANLVQEQVVRWLTASGLFATVSSSAGPLPPDYLLQGQITELYGDYR 137
Query: 140 -DRHCAIITMSLKIIN--AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ AI+ + + A D + + + E L +++ + A I +
Sbjct: 138 DRQPVAILEIGFLFLQHAAADAPIRLNRSYRGEVPLTGHEPDALVEAWDTALINILENL 196
>gi|218961390|ref|YP_001741165.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
gi|167730047|emb|CAO80959.1| hypothetical protein; putative signal peptide [Candidatus
Cloacamonas acidaminovorans]
Length = 729
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 69/188 (36%), Gaps = 9/188 (4%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNN--PVNIYDLTESTKYDESVQRHIQ-----LIIT 60
+ +K + S + + L+ C PVN Y L ++ R L +
Sbjct: 2 LKRKCLYIFSGFLAILLLLTGCLQKVERTPVNYYVLEYQPGTEKPELRRTTNTGKNLEVL 61
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+ + + + I+V+ + +++L W+ +L I ++ + TV + Q
Sbjct: 62 DTVLNRTYDRSQIVVKENFYNVKFLQTDVWATRLRDAIPNLIVQRLKAYNIFGTVSRGEQ 121
Query: 121 GIY-ADYQIISAIRSFE-INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
Y + + + + E I A + M + ++ +V +L + +
Sbjct: 122 LEKNPHYFLETKVYNIEKIAGTEPRAYLNMEFVLRDSTSERIVFSHKGERTMELIDPSMI 181
Query: 179 HFIQSLNR 186
+ +Q+ N
Sbjct: 182 YLVQAFNE 189
>gi|295675324|ref|YP_003603848.1| protein of unknown function DUF330 [Burkholderia sp. CCGE1002]
gi|295435167|gb|ADG14337.1| protein of unknown function DUF330 [Burkholderia sp. CCGE1002]
Length = 208
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/203 (13%), Positives = 67/203 (33%), Gaps = 10/203 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNI-YDLTESTKYDESVQRHIQLII 59
M + +++++ + +L + ++ YD + + + + +
Sbjct: 1 MSRSIHRLLSSRAAFAALLAFGVLAAGCAGTSAVVSDVRYDFGPPPQAATASRLP-AVKV 59
Query: 60 TEPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
E +L S+ + R S + S W+ +++ +L G TV+
Sbjct: 60 LEVSAPSVLESDRLTYRLSYADAQQTAAYANSHWTMMPSQLLTQRLRNALSERG---TVL 116
Query: 117 KPNQGIYADYQIISAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175
G+ A + + FE + ++ + +VGQ F
Sbjct: 117 TGADGVSAPV-LRVDLTEFEQVFASPTDSHGAITARATLMQGGKVVGQHTFVAHASAHSA 175
Query: 176 NKLHFIQSLNRAFSRISSEIIDW 198
+ ++L A + ++I W
Sbjct: 176 DAAGGARALAVASDDLVAQIATW 198
>gi|329905878|ref|ZP_08274261.1| putative lipoprotein [Oxalobacteraceae bacterium IMCC9480]
gi|327547449|gb|EGF32270.1| putative lipoprotein [Oxalobacteraceae bacterium IMCC9480]
Length = 195
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 70/181 (38%), Gaps = 7/181 (3%)
Query: 28 SCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS---SPIEIQY 84
C P +DL + + + I + L+ ++ R + + Q
Sbjct: 15 GCATPAAPPAQFDLGPLPAASQVARVLPAVSIASATSSPFLDHPRMLYRLDYANSQQPQQ 74
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF-EINIDRHC 143
S+W+ ++I+ +L A G V+ + G + A+ F ++
Sbjct: 75 FANSRWTMAPAQLIEQRLKARLGQAGS--AVLAASDGARNVPLLHVALDEFVQVFTTPAS 132
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSL 203
+ +++++ ++ LV QK F + + ++L A + +++IDW L +L
Sbjct: 133 STGQLTVRVAVFNERLLVAQKSFTQQRPAASADAAGGARALAGASDALITDVIDW-LGTL 191
Query: 204 P 204
P
Sbjct: 192 P 192
>gi|317153921|ref|YP_004121969.1| hypothetical protein Daes_2217 [Desulfovibrio aespoeensis Aspo-2]
gi|316944172|gb|ADU63223.1| protein of unknown function DUF330 [Desulfovibrio aespoeensis
Aspo-2]
Length = 205
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 68/179 (37%), Gaps = 8/179 (4%)
Query: 25 SLSSCFF-HNNPVN--IYDLTESTKYD-ESVQRHIQLIITEPITEKILNSEDIIVRSSPI 80
++C P++ Y L + Q I L + + N+ +II + +
Sbjct: 16 GCAACVKMGGKPLDKHYYRLAPVRAQSLPAPQDGIVLNVRRLAVSDLYNTREIIYQLADG 75
Query: 81 EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINID 140
++ + + M+ +L +G+ S ++ P + D + A+ + +
Sbjct: 76 RMESDFYNLYFITPGSMLTSELRDWLAASGRFSHIITPGSMVVPDLILEGAVNTLYGDFS 135
Query: 141 --RHCAIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A+++M +++ DN+++ K + L + +Q+L I +++
Sbjct: 136 STPPAAVMSMQFFLVDESTPDNTILFSKNYTQRIPLSQPTAQELVQALTEGTRTIFTQL 194
>gi|254465324|ref|ZP_05078735.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
gi|206686232|gb|EDZ46714.1| conserved hypothetical protein [Rhodobacterales bacterium Y4I]
Length = 185
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 54/159 (33%), Gaps = 4/159 (2%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
Y ++ + + R + + + +I+ + L G+QW+D R +
Sbjct: 25 YLISAAPGEKVANLRSRTIEVRLVSLPSYAAASEIVAEGDGGALFALGGAQWADDPARGM 84
Query: 99 QLKLIANF-ENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHD 157
L + G + V D ++ + D A+ +++ +
Sbjct: 85 TAALARGLNQRTGAAAAVEPWPLNTGPDVRLDVRVDQAYARADGVFALTGQFA--VSSPE 142
Query: 158 NSLVG-QKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
++ + F + + +L+RA + ++ ++
Sbjct: 143 GTVREFVRPFDILVPVNGTGPSAAADALSRALAELARQV 181
>gi|307131469|ref|YP_003883485.1| hypothetical protein Dda3937_03521 [Dickeya dadantii 3937]
gi|306528998|gb|ADM98928.1| conserved protein [Dickeya dadantii 3937]
Length = 187
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 62/177 (35%), Gaps = 9/177 (5%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTEST---KYDESVQRHIQLIITEPITEKILNSEDIIVRSS 78
L L +C Y L +T + QL + L I+ ++S
Sbjct: 9 LVVLLGACSSPQKVY--YQLPAATQNTSVSVASTEGRQLWVAPVTLVDSLAGNGIVFQTS 66
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEIN 138
+ + W+ L + +Q L+A+ N V + + +F+
Sbjct: 67 AVRYTIATNNLWASPLDQQLQQALVASLRNGLPGWHVAATGAASDNASSLQVNVTAFQGR 126
Query: 139 IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D A+I + + ++ + F++E +D I +L + + +++ ++
Sbjct: 127 FDGK-AVIR--GEWVLQGSKRVI-TQPFNIEVPQAEDGYDALIGALGKGWQQVAEQV 179
>gi|323524594|ref|YP_004226747.1| hypothetical protein BC1001_0222 [Burkholderia sp. CCGE1001]
gi|323381596|gb|ADX53687.1| protein of unknown function DUF330 [Burkholderia sp. CCGE1001]
Length = 213
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/208 (13%), Positives = 71/208 (34%), Gaps = 15/208 (7%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTS--LSSCFFHNNPVNI----YDLTESTKYDESVQRH 54
M + +++++ ++ A + L + + P + YD + +
Sbjct: 1 MSRSIHRLLSSRVTRAGAACAALVAVGLLAAGCTSTPAALSDIRYDFGPPKPASSAGTQP 60
Query: 55 IQLIITEPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGK 111
+ + + + L S+ ++ R ++ S W+ ++ +L + G
Sbjct: 61 -AVKVLDVSAPEGLQSDKLVYRLGYADSQQVAAYANSHWTMPPSALLTQRLRGALSSRG- 118
Query: 112 ISTVVKPNQGIYADYQIISAIRSFEINIDRH-CAIITMSLKIINAHDNSLVGQKVFHVEE 170
TV+ G+ A + + FE D + ++ + ++GQ+ F
Sbjct: 119 --TVLTGADGVAAPV-LKIELSEFEQVFDSQSQSHAAVTARATLTQSGKVIGQRTFISRA 175
Query: 171 KLEKDNKLHFIQSLNRAFSRISSEIIDW 198
+ Q+L A + +I W
Sbjct: 176 PSRSADAAGGAQALAAASDELVDQIGAW 203
>gi|188534235|ref|YP_001908032.1| Putative lipoprotein protein [Erwinia tasmaniensis Et1/99]
gi|188029277|emb|CAO97154.1| Putative lipoprotein protein [Erwinia tasmaniensis Et1/99]
Length = 187
Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 66/182 (36%), Gaps = 8/182 (4%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDIIV 75
+ V L +LS+C Y L T + L + L ++
Sbjct: 5 IPVALALTLSACGSGPKTAY-YQLPTVTPSTAVSSSTLARPLWVERVTVPDYLAGSGVVY 63
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+S+ ++ +QW+ L + +Q L++N + G D + + F
Sbjct: 64 QSNDVQYVIATNNQWASPLDQQLQQTLVSNLSATLPQVLISSTPLGQQHD-TLKVDVSGF 122
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D H + S + + H+ L ++ F + + D +++L + +++ ++
Sbjct: 123 HGRYDGHAVV---SGEWVLEHNGELF-KQPFVIALPQKDDGYDALVRTLAAGWQQVADQV 178
Query: 196 ID 197
+
Sbjct: 179 AN 180
>gi|182416426|ref|YP_001821492.1| hypothetical protein Oter_4622 [Opitutus terrae PB90-1]
gi|177843640|gb|ACB77892.1| protein of unknown function DUF330 [Opitutus terrae PB90-1]
Length = 214
Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/204 (17%), Positives = 87/204 (42%), Gaps = 18/204 (8%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNI---YDLTE---STKYDESVQRHIQL 57
+++ + K + L + L+ C ++ Y LT + + + + ++
Sbjct: 14 RMSSLWKPALAGSLLVGM----LTGCSLPEAQPDLTRFYVLTPTLAAAEMAKPAEAAPRV 69
Query: 58 IITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
++ + + L + + VR S E++Y+ ++W++ L +Q L + E +G++ V +
Sbjct: 70 LLRGVMVPEFLRGKIMPVRLSDTELRYIDQARWAEPLEAGLQRTLKVDLERSGRVRVVGR 129
Query: 118 PNQGIYADYQIISAIRSFEINIDRHCAIITMSLKI---INAHDNSLVGQKVFHVEEKL-E 173
++ D++I +R E + A ++ +I + LV Q F E +
Sbjct: 130 GSEP--HDFEIALQVRQCEGVVPGRVA--RLAARIEVYSGDVEAKLVAQDEFTTEIAGWD 185
Query: 174 KDNKLHFIQSLNRAFSRISSEIID 197
N + L+ A ++++ + D
Sbjct: 186 GANHAELAKKLSEAAAQLAQRVAD 209
>gi|90577617|ref|ZP_01233428.1| hypothetical protein VAS14_11239 [Vibrio angustum S14]
gi|90440703|gb|EAS65883.1| hypothetical protein VAS14_11239 [Vibrio angustum S14]
Length = 190
Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 64/186 (34%), Gaps = 6/186 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ-RHIQLIITEPITEKI-LNSEDI 73
L + + + C + Y L T + + + L+I P+ L +
Sbjct: 4 WLLIAAVALAGTGCSSTEPALKTYMLPMPTSANTAHNISNKSLLIVRPVEVAAHLAGTGL 63
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISA 131
+ ++SP EI + W + L + ++ + +T + P ++
Sbjct: 64 VYQTSPTEIVEAQQNLWGESLSTQLTRRITFDLRQKQTQFWATQLTPTLSTAGIPRLQVR 123
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
I F A + +IN + L F L KD +++L++ +
Sbjct: 124 INQFNGVYSG-VAEVAGEWLLING-NGDLQTVHPFSFRVPLAKDGYSAQVEALSKGVDEL 181
Query: 192 SSEIID 197
++++
Sbjct: 182 TTQLAR 187
>gi|330448139|ref|ZP_08311787.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328492330|dbj|GAA06284.1| conserved hypothetical protein [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 190
Score = 56.1 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 64/185 (34%), Gaps = 6/185 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR-HIQLIITEPITEKI-LNSEDI 73
L + + C + Y L ST + + + L+I P+ L +
Sbjct: 4 WLLIAAVALVGTGCSSTEPVMTTYMLPMSTTANTAHNVSNKSLLIVRPVEVAAHLAGTGL 63
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISA 131
+ ++SP EI + W + L + + ++ + T + P ++
Sbjct: 64 VYQTSPTEIVEAQQNLWGEALGKQLTRRITQDLRQKQTKFWPTQLTPTLSTAGVPRLQVR 123
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
I F A + +IN + L F L KD +++L++ +
Sbjct: 124 INQFNGVYTG-VAEVAGEWLLING-NGDLQTVHPFTFRVPLAKDGYPAQVEALSKGVGEL 181
Query: 192 SSEII 196
++++
Sbjct: 182 TTQLA 186
>gi|188590868|ref|YP_001795468.1| hypothetical protein RALTA_A0073 [Cupriavidus taiwanensis LMG
19424]
gi|170937762|emb|CAP62746.1| conserved hypothetical protein [Cupriavidus taiwanensis LMG 19424]
Length = 217
Score = 55.7 bits (133), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 54/188 (28%), Gaps = 24/188 (12%)
Query: 27 SSC-FFHNNPVNIYDLTES--------TKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
S C P YDL + T +L + + L + R
Sbjct: 33 SGCALTRGEPTITYDLGPALAGPAASATGNPAPAPLP-KLRVAQTDGPNWLEGNALFYRL 91
Query: 78 S---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+Q +W R+ +L G T+ G + +
Sbjct: 92 QYAQAQRLQAYATQRWVMSPTRLFDERLRDAVAARG---TLGWSGDGSVP--ALKVDLLE 146
Query: 135 FEINIDRHCA---IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
F+ A ++ + + ++GQ+ F V + +++L A
Sbjct: 147 FDQVFHSATASEGVVRLRATVYRHG---MLGQQTFEVRRPAPSADGAGGVKALAEASDAA 203
Query: 192 SSEIIDWT 199
+ ++DW
Sbjct: 204 IAALLDWI 211
>gi|53802516|ref|YP_112708.1| putative lipoprotein [Methylococcus capsulatus str. Bath]
gi|53756277|gb|AAU90568.1| putative lipoprotein [Methylococcus capsulatus str. Bath]
Length = 172
Score = 55.7 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 67/188 (35%), Gaps = 22/188 (11%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
+ +S +L + L TS S P ++D + + + + P +
Sbjct: 2 RRLSWTLMLSLATSACSLLPERPPQPALHDFGAAGAAAPAPWSSVD--VDAPEWLRNDRL 59
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
+ ++ + P E++ +W +++ +L + G Y++
Sbjct: 60 QYRLLYAKPTELRSYTLDRWIAPPSELLEQRL-----------KAGRSANG----YRLHI 104
Query: 131 AIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
+++FE +R + S +I + + F ++ + +Q+ +A R
Sbjct: 105 ELQAFEQVFERPGS----SHVMIRLRAETPADTETFQFDQPTASPDAAGAVQAFAQAVDR 160
Query: 191 ISSEIIDW 198
+++ W
Sbjct: 161 AVAQLRAW 168
>gi|152982032|ref|YP_001354934.1| ABC-type uncharacterized transport system, auxiliary component
[Janthinobacterium sp. Marseille]
gi|151282109|gb|ABR90519.1| ABC-type uncharacterized transport system, auxiliary component
[Janthinobacterium sp. Marseille]
Length = 203
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 13/187 (6%)
Query: 27 SSCFFHNNPVNIYDLTE--STKYDESVQRHIQLIITEPITEKILNSEDIIVRSS---PIE 81
+ C + + +YDL + K D +V L I E L+++ + R + +
Sbjct: 20 TGCAGNAPALTLYDLGPLQAQKTDTTVNNLPALSIAEVAAPSWLDTQMMFYRLNYANNQQ 79
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR 141
+ GSQW+ ++++ +L A G I VV + G + + F + D
Sbjct: 80 PRPYAGSQWAMPPAQLLEQRLKARLSQAGGI--VVPADNGAANLPILRIEVDDFSQSFDS 137
Query: 142 ---HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
I M + + + L QK+F + + +L A I +EI W
Sbjct: 138 AQHSTINIAMRASLFDGRN--LRAQKMFSRQLPTVSADAQGGAAALASASDAIINEIAVW 195
Query: 199 TLSSLPL 205
LS++P
Sbjct: 196 -LSTVPT 201
>gi|322419713|ref|YP_004198936.1| hypothetical protein GM18_2200 [Geobacter sp. M18]
gi|320126100|gb|ADW13660.1| protein of unknown function DUF330 [Geobacter sp. M18]
Length = 198
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 74/191 (38%), Gaps = 11/191 (5%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR--HIQLIITEPITEKILN 69
+ S LA++ LSS + V Y L + + Q + + +++N
Sbjct: 2 RRTSAPLAIVAALLLSSACSRSPRVTYYTLAPGSPVQSAPQLQQPAAVAVGPVTIPELVN 61
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKL----PRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
++VR +P + L +W++ L PR++ L ++ + G
Sbjct: 62 RPQLVVRVTPNRVAVLESHRWAEPLKTEIPRLMAQNLGQLLGSSRVSAY--GQGSGGEPR 119
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
Y+++ I + + +T+ + S + V+EK+ + +L+
Sbjct: 120 YRVLIDITRLDAVPGEN---VTVEASWLVRGVGSARREGRALVQEKVSGAGYEAVVAALS 176
Query: 186 RAFSRISSEII 196
RA + +S+E+
Sbjct: 177 RALAGVSAEVA 187
>gi|300312723|ref|YP_003776815.1| hypothetical protein Hsero_3427 [Herbaspirillum seropedicae SmR1]
gi|300075508|gb|ADJ64907.1| conserved hypothetical protein [Herbaspirillum seropedicae SmR1]
Length = 212
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 53/169 (31%), Gaps = 8/169 (4%)
Query: 35 PVNIYDLTESTKYDESVQRHIQ-----LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQ 89
P Y L T + + Q + + + L ++VRS + L +
Sbjct: 31 PTQFYTLAAPTDAGATARSAAQGPQTFIEVMPVAVPERLARPQLVVRSDATRVDVLEQER 90
Query: 90 WSDKLPRMIQLKLIANFENNGKISTVVKPNQGI-YADYQIISAIRSFEINIDRHCAIITM 148
WS ++ L A V + + Y+I +R F+ + +
Sbjct: 91 WSSPFNNELRDALAAGVAARLGAIDVSRGGRPADQPSYRINVELRDFDA-MRNGQVQASF 149
Query: 149 SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
I + D ++ V E++ + + +A + I D
Sbjct: 150 GWTITRSDDRRSAACRL-TVVERVAGSANADVVAATQKAVGQAVQAIAD 197
>gi|186474288|ref|YP_001861630.1| hypothetical protein Bphy_5507 [Burkholderia phymatum STM815]
gi|184196620|gb|ACC74584.1| protein of unknown function DUF330 [Burkholderia phymatum STM815]
Length = 201
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/197 (10%), Positives = 67/197 (34%), Gaps = 8/197 (4%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSC-FFHNNPVNIYDLTESTKYDES-VQRHIQLIITEPI 63
K + + + LC +++ P + Y L+ + S +++
Sbjct: 1 MKPLTRTGCHAAALFSLCATVALLNGCKTPPSSFYTLSADPSLERSSHPLQGTVVVGPVT 60
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQG 121
++++ ++ R S E+ ++W + L + + + + +V
Sbjct: 61 IPELVDRPQLVTRVSGNEVALEEFARWGEPLKSGVAAAIAGDLARLLGSERVSVSSQTVA 120
Query: 122 IYADYQIISAIRSFEINIDRHCAIITMSLK-IINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+++ + F+ + + + ++A + + V E +
Sbjct: 121 GTESWRVRIDLVQFD---SMPGEAVAIDARWTVHAAGRTTLLTGRSTVREPVAGAGYDAL 177
Query: 181 IQSLNRAFSRISSEIID 197
+ + +RA + +S +I
Sbjct: 178 VAAHSRALATVSRDIAA 194
>gi|56479162|ref|YP_160751.1| putative lipoprotein [Aromatoleum aromaticum EbN1]
gi|56315205|emb|CAI09850.1| hypothetical protein putative lipoprotein [Aromatoleum aromaticum
EbN1]
Length = 218
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/187 (11%), Positives = 59/187 (31%), Gaps = 6/187 (3%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESVQ-RHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
+ +DL + +++ ++ + P + + P + +
Sbjct: 23 GCGNLGVPAERFTFFDLGLVEPVETALEFPPTRVDVRAPSWLSTGAMQYRLDYRQPAQRE 82
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
++W + M+++ L NG + + ++ + F D
Sbjct: 83 AYSETRWVAEPAEMLRVALDRALTMNGTANRTANRTA--DGECRLRIELDEFVQVFDSEQ 140
Query: 144 ---AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTL 200
A I ++ ++ + + V E + + + RA R++ ++ W
Sbjct: 141 SSHATIVARAALLAPRSDAELAHRTLVVSEPTPTPDAAGGVFAFRRAVQRLAHDVSFWLA 200
Query: 201 SSLPLSD 207
S P +
Sbjct: 201 SLDPEAA 207
>gi|253700839|ref|YP_003022028.1| hypothetical protein GM21_2220 [Geobacter sp. M21]
gi|251775689|gb|ACT18270.1| protein of unknown function DUF330 [Geobacter sp. M21]
Length = 197
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/192 (16%), Positives = 70/192 (36%), Gaps = 11/192 (5%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL--TESTKYDESVQRHIQLIITEPITE 65
+ K + SLA+++ + + N Y L + + +
Sbjct: 1 MRKPALCLISLALVMSITACGRSPRS---NFYTLVPQAAPPGQSLSPAAPSVSVGPVTIP 57
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
++++ I+VR + ++ L +W++ L I + + S V Q AD
Sbjct: 58 ELVDRPQIVVRVAENRVEVLESHRWAEPLKSEIPRLMAQDLGRMLGSSRVSSYGQSAGAD 117
Query: 126 --YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
Y+++ I E A +L + + + G+ + + + I +
Sbjct: 118 ATYRVLVDIVRLE--AIPAEAATVQALWTVRRGNARIKGESLVREKVSAAGYD--QLISA 173
Query: 184 LNRAFSRISSEI 195
+RA + +SS+I
Sbjct: 174 CSRALAGVSSDI 185
>gi|170691587|ref|ZP_02882752.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
gi|170143792|gb|EDT11955.1| conserved hypothetical protein [Burkholderia graminis C4D1M]
Length = 213
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 73/208 (35%), Gaps = 15/208 (7%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFH--NNPVNI----YDLTESTKYDESVQRH 54
M + +++++ ++ A + + P + YD + +
Sbjct: 1 MSRSIHRLLSSRVTRAGAACAALVAAGLLAAGCTSTPAALSDIRYDFGPPKPASSAGTQP 60
Query: 55 IQLIITEPITEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGK 111
+ + + ++L S+ ++ R + ++ S W+ ++ +L + G
Sbjct: 61 -AVKVLDVSAPEVLRSDKLVYRIGYADSQQVAAYANSHWTMPPSELLTQRLRGALSSRG- 118
Query: 112 ISTVVKPNQGIYADYQIISAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEE 170
TV+ G+ A + + FE D + ++ + + ++GQ+ F
Sbjct: 119 --TVLTGADGVPAPV-LKVDLNEFEQVFDSQAQSHAAVTARATLTQNGKVIGQRTFISRA 175
Query: 171 KLEKDNKLHFIQSLNRAFSRISSEIIDW 198
+ Q+L A + ++I W
Sbjct: 176 PSRSADAAGGAQALAAASDDLVAQIGAW 203
>gi|28898793|ref|NP_798398.1| hypothetical protein VP2019 [Vibrio parahaemolyticus RIMD 2210633]
gi|153839716|ref|ZP_01992383.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|260364134|ref|ZP_05776840.1| putative lipoprotein [Vibrio parahaemolyticus K5030]
gi|260877217|ref|ZP_05889572.1| putative lipoprotein [Vibrio parahaemolyticus AN-5034]
gi|260897837|ref|ZP_05906333.1| putative lipoprotein [Vibrio parahaemolyticus Peru-466]
gi|260901534|ref|ZP_05909929.1| putative lipoprotein [Vibrio parahaemolyticus AQ4037]
gi|28807012|dbj|BAC60282.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
2210633]
gi|149746769|gb|EDM57757.1| conserved hypothetical protein [Vibrio parahaemolyticus AQ3810]
gi|308087641|gb|EFO37336.1| putative lipoprotein [Vibrio parahaemolyticus Peru-466]
gi|308090326|gb|EFO40021.1| putative lipoprotein [Vibrio parahaemolyticus AN-5034]
gi|308110917|gb|EFO48457.1| putative lipoprotein [Vibrio parahaemolyticus AQ4037]
gi|308115231|gb|EFO52771.1| putative lipoprotein [Vibrio parahaemolyticus K5030]
Length = 192
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 71/187 (37%), Gaps = 8/187 (4%)
Query: 17 SLAVLLCTSLSSCFFHNNPV-NIYDLTESTK--YDESVQRHIQLIITEPITEKI-LNSED 72
LA L T L+ C +Y L ++ ++ L++ P LN
Sbjct: 6 LLATALVTGLTGCSSAPETTGALYLLPKAETKTSNQMSVAERPLLVIRPAQLASYLNDNS 65
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY--ADYQIIS 130
I+ R+S +I QW+ + I +++A V+ N + + ++
Sbjct: 66 IVYRTSDTQIVQAKRHQWAQSISEQITQRVVAELRQKQSDYWPVEMNNLLDQSGESKLQL 125
Query: 131 AIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
+ F + + A I +I+A N + +V + L+ + + +L+ ++
Sbjct: 126 TLNKFNGSYQGN-AEIEGEWLLIDASGNVVRSSQV-KILMPLQDEGYDALVDALSAGLNQ 183
Query: 191 ISSEIID 197
++ ++
Sbjct: 184 LTDDMAA 190
>gi|312797429|ref|YP_004030351.1| transcriptional regulator [Burkholderia rhizoxinica HKI 454]
gi|312169204|emb|CBW76207.1| Transcriptional regulator [Burkholderia rhizoxinica HKI 454]
Length = 257
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 69/219 (31%), Gaps = 31/219 (14%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFH----NNPVNIYDLTESTKYDESVQ------------ 52
+ +I+ + +L + C + + YDL S
Sbjct: 27 MSSRIMGSLVVLLGVFTFGGCGTAGHRASPAAHRYDLGAPAIAVHSGPMSPNGVAPRAGA 86
Query: 53 ---RHIQLIITEPITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANF 106
+ + L+S+ I+ R + + + S+W +++ +L
Sbjct: 87 AAPAFGPFKLVDMGAPASLDSDGIVYRLAYAHAQQPRTYASSRWVATPAQLLTQRLRVLL 146
Query: 107 ENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA---IITMSLKIINAHDNSLVGQ 163
G VV P + A + + FE D+ A ++ + ++ Q
Sbjct: 147 ---GARGAVVSPGDPVSAPV-LRVELLEFEQIFDKPGASRGVVALRATLL--RRGRQFTQ 200
Query: 164 KVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
F + + +++L +A S++ DW S
Sbjct: 201 ATFGADAPASSADASGGVRALAQASDVALSQLADWLASQ 239
>gi|328474648|gb|EGF45453.1| hypothetical protein VP10329_18135 [Vibrio parahaemolyticus 10329]
Length = 192
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/187 (16%), Positives = 72/187 (38%), Gaps = 8/187 (4%)
Query: 17 SLAVLLCTSLSSCFFHNNPV-NIYDLTESTK--YDESVQRHIQLIITEPITEKI-LNSED 72
LA L T L+ C +Y L ++ ++ L++ P LN
Sbjct: 6 LLATALITGLTGCSSAPEATGALYLLPKAETKTSNQMSVAERPLLVIRPAQLASYLNDNS 65
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY--ADYQIIS 130
I+ R+S +I QW+ + I +++A V+ N + + ++
Sbjct: 66 IVYRTSNTQIVQAKRHQWAQSISEQITQRIVAELRQKQSDYWPVEMNNLLDQSGESKLQL 125
Query: 131 AIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
++ F + + A I +I+A N + ++ + L+ + + +L+ ++
Sbjct: 126 SLNKFNGSYQGN-AEIEGEWLLIDASGNVVRSSQI-KILMPLQDEGYDALVDALSAGLNQ 183
Query: 191 ISSEIID 197
++ +I
Sbjct: 184 LTDDIAA 190
>gi|186475418|ref|YP_001856888.1| hypothetical protein Bphy_0652 [Burkholderia phymatum STM815]
gi|184191877|gb|ACC69842.1| protein of unknown function DUF330 [Burkholderia phymatum STM815]
Length = 196
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 68/183 (37%), Gaps = 3/183 (1%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDE-SVQRHIQLIITEPITEKILNSEDII 74
SL V+ L++C + Y L+ + + + +++ ++++ ++
Sbjct: 10 ASLCVVGMALLAACASPR--SSFYTLSPDSTLESVGAPLSVAVVVGPVTIPELVDRPQLV 67
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
R S E++ ++W + L + + A+ V +Q + +
Sbjct: 68 TRVSGNEVRLDEFARWGEPLKSGVADVIAADLTRLLGSKQVSVSSQTVAGTEACRVRVDI 127
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
+ + A+ +L + + + V E ++ ++ + + +RA + +S E
Sbjct: 128 VQFDSMPGEAVAVDALWTVRVAGRTTLLTGRSTVREPVQGTDEAALVAAHSRALAAVSRE 187
Query: 195 IID 197
I
Sbjct: 188 IAA 190
>gi|197118383|ref|YP_002138810.1| lipoprotein [Geobacter bemidjiensis Bem]
gi|197087743|gb|ACH39014.1| lipoprotein of unknown function DUF330 [Geobacter bemidjiensis Bem]
Length = 196
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 75/191 (39%), Gaps = 10/191 (5%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
+ K + SLA+++ + S + + Y L ++ + P+T
Sbjct: 1 MRKPALCLISLALVMSVTACSRSPRS---SFYTLVPQAAPPPALSPAAPSVSVGPVTIPE 57
Query: 68 L-NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD- 125
L + I+VR + ++ L +W++ L I + + S V Q AD
Sbjct: 58 LVDRPQIVVRVAENRVEVLESHRWAEPLKSEIPRLMAQDLGRMLGSSRVSSYGQSAGADA 117
Query: 126 -YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
Y+++ I E + A + +L + + + G+ + V EK+ I +
Sbjct: 118 TYRVLVDIVRLEA-VPGDAATVQ-ALWTVRRGNARIKGESL--VREKVSAPGYDQLISAC 173
Query: 185 NRAFSRISSEI 195
+RA +SS+I
Sbjct: 174 SRALGGVSSDI 184
>gi|320353200|ref|YP_004194539.1| hypothetical protein Despr_1076 [Desulfobulbus propionicus DSM
2032]
gi|320121702|gb|ADW17248.1| protein of unknown function DUF330 [Desulfobulbus propionicus DSM
2032]
Length = 211
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 76/198 (38%), Gaps = 14/198 (7%)
Query: 9 IKKKIISCSLAVLLCTSL-SSCFFHNNPVNIYDLTESTKYDESV--QRHIQLIITEPITE 65
+ +L+C L C +Y L + +LI+ PI
Sbjct: 3 TANNVGRSLGWLLVCALLLGGCLKPTTNNILYALQPVRQPPLGHDFTTSKELILLMPIQL 62
Query: 66 KI-LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN---NGKISTVVKPNQG 121
L ++ + + E + W+ L + I +++A+ ++ +++ P G
Sbjct: 63 APHLQGRGLLTQRTSGEARASANHLWAGPLDQQISQQMVADLKDLLATDQVAAYPGPRYG 122
Query: 122 IYADYQIISAIRSFEINIDR--HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ YQ+ I F N + A+ T+S ++ ++V +K F ++K
Sbjct: 123 V-IRYQLEVDINEFSGNGRQFITTAVYTLS----DSVRKTIVARKTFRQTRPIDKPEYSG 177
Query: 180 FIQSLNRAFSRISSEIID 197
++ S ++A + +S E+
Sbjct: 178 YVDSGSQAVADLSREVAA 195
>gi|239813315|ref|YP_002942225.1| hypothetical protein Vapar_0296 [Variovorax paradoxus S110]
gi|239799892|gb|ACS16959.1| protein of unknown function DUF330 [Variovorax paradoxus S110]
Length = 227
Score = 53.4 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/133 (13%), Positives = 46/133 (34%), Gaps = 14/133 (10%)
Query: 63 ITEKILNSEDIIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKIS----T 114
+ L+S I+ R E++ S+WS ++++ +L E +
Sbjct: 73 ESNTRLDSTQILYRLGYADANELRPYGQSRWSLAPAQLLRQRLRDALAERRTVLGPEESA 132
Query: 115 VVKPNQGIYADYQIISAIRSFE---INIDRHCAIITMSLKIINAHDN--SLVGQKVFHVE 169
+ +G D + ++ F + ++ + +I ++GQ+ F V
Sbjct: 133 TIARAEGKVPD-TLRISLDEFSHYFESASSSAGLVRLRATLIRGTTGGDRVLGQRSFTVR 191
Query: 170 EKLEKDNKLHFIQ 182
+ ++
Sbjct: 192 RPAPSADAPGGVK 204
>gi|84394022|ref|ZP_00992760.1| hypothetical protein V12B01_03543 [Vibrio splendidus 12B01]
gi|84375359|gb|EAP92268.1| hypothetical protein V12B01_03543 [Vibrio splendidus 12B01]
Length = 167
Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 62/178 (34%), Gaps = 21/178 (11%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
+++++ L C + N Y L EST + ++ + P L++ I R
Sbjct: 6 ISLVVSVGLLGCAAPTDGTNAYLLPEST--LDKPIFKVKTSVDLPD---YLDTIGIAYRK 60
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
S E+ W++ L +++ + V + + ++ F
Sbjct: 61 SENELVSARKHVWAENLEGLLEER-------------VNTSDTSGEPERELTITFEQFNG 107
Query: 138 NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ + + + + S + + F + L++ +++L + SEI
Sbjct: 108 SYTGNA---EVKGTWVLSDQGSELARADFESKVPLKEAGYEALVEALGEGLDEVLSEI 162
>gi|194099087|ref|YP_002002170.1| Lipoprotein [Neisseria gonorrhoeae NCCP11945]
gi|240017014|ref|ZP_04723554.1| Lipoprotein [Neisseria gonorrhoeae FA6140]
gi|193934377|gb|ACF30201.1| Lipoprotein [Neisseria gonorrhoeae NCCP11945]
Length = 172
Score = 53.0 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 73/189 (38%), Gaps = 17/189 (8%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+ ++ P I W+D L M++ L F T V ++ D +
Sbjct: 57 -----VYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRTFVPASRSGSTD-KW 110
Query: 129 ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 111 TVYIDAFQGSYTGKT-LISGYAVLPDGKN------RPFHIETEQQGDGYAAMTAALEQGL 163
Query: 189 SRISSEIID 197
+ + ++++
Sbjct: 164 KQAAQQMVE 172
>gi|303247227|ref|ZP_07333501.1| protein of unknown function DUF330 [Desulfovibrio fructosovorans
JJ]
gi|302491386|gb|EFL51274.1| protein of unknown function DUF330 [Desulfovibrio fructosovorans
JJ]
Length = 198
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/204 (16%), Positives = 76/204 (37%), Gaps = 13/204 (6%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRH--IQLIITEPI 63
+ + I + A C L + + P + + L+ + K + + + I
Sbjct: 1 MRRRPRTIAAVVAAAACCLPLLTGCGKSAPTHFFSLSTAAKENVAAPDGPCQSIGIGPVD 60
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKI----STVVKP- 118
L+ I+ R P ++ QW++ L Q L EN G + V P
Sbjct: 61 FPAYLDRSQIVTRLGPNQMHLAEFDQWAEPLRDNFQRALA---ENLGALICAKPLVTYPW 117
Query: 119 NQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
G + D QI+ + F+ ++ ++ A + S +++ D + + + +E
Sbjct: 118 PVGGHPDKQIVIQVARFDGSLGQN-ATLRASWSVVDG-DGNNLAWRSVEYQEAATGPGYA 175
Query: 179 HFIQSLNRAFSRISSEIIDWTLSS 202
+ ++ + + ++ D TL
Sbjct: 176 DLAAAQSKLVEKFAKDVAD-TLRQ 198
>gi|258543507|ref|YP_003188940.1| hypothetical protein APA01_24530 [Acetobacter pasteurianus IFO
3283-01]
gi|256634585|dbj|BAI00561.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01]
gi|256637641|dbj|BAI03610.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-03]
gi|256640695|dbj|BAI06657.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-07]
gi|256643750|dbj|BAI09705.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-22]
gi|256646805|dbj|BAI12753.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-26]
gi|256649858|dbj|BAI15799.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-32]
gi|256652848|dbj|BAI18782.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-01-42C]
gi|256655902|dbj|BAI21829.1| hypothetical protein [Acetobacter pasteurianus IFO 3283-12]
Length = 232
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 15/146 (10%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
+ + T+ S ++Y L + + + + P L+
Sbjct: 23 SGVAGLGVMAFTLTACSGGSP-----SLYTLAVTPGQPQPG-GPRFVEVRLPTVASGLDR 76
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLP----RMIQLKLIANFENNGKISTVVKPNQGIYADY 126
+ I+ S ++ WSD LP R++ L G V +
Sbjct: 77 DRIVTADSGYKLTVSAADAWSDSLPAQISRVMAGDLAQRLPGTGVF--VENDTVATEPEA 134
Query: 127 QIISAIRSFEINIDRHCAIITMSLKI 152
+ +I F + + +
Sbjct: 135 YVDMSISRFST---GPSGNVELDATL 157
>gi|116749846|ref|YP_846533.1| hypothetical protein Sfum_2417 [Syntrophobacter fumaroxidans MPOB]
gi|116698910|gb|ABK18098.1| protein of unknown function DUF330 [Syntrophobacter fumaroxidans
MPOB]
Length = 204
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/199 (17%), Positives = 62/199 (31%), Gaps = 14/199 (7%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDL-----TESTKYDESVQRHIQLIITEPITEKILN 69
+ ++ L L+ C Y L + I + L+
Sbjct: 10 TLAVFGLFVFLLAGCAHTPQ-SRFYLLQSRVPPGMSGAVSPGADGAVFGIGPVKFPEYLD 68
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN--QGIYADYQ 127
I+ R+ EIQ +W++ L L N + VV YQ
Sbjct: 69 RPQIVTRTGLNEIQLAEYHRWAEPLKDNFARVLTENLAALLPANGVVAFPWPGSARVRYQ 128
Query: 128 IISAIRSFEINIDRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
++ + F+ R + + I++ N+ V K + + + + N
Sbjct: 129 VMVEVTRFDGIAGREA---RLDAQWTIVDVAANTTVTTKKTGIARPVASPGHESLVAAQN 185
Query: 186 RAFSRISSEIIDWTLSSLP 204
A +EI D L SLP
Sbjct: 186 EALGEFGAEIAD-ALKSLP 203
>gi|16759946|ref|NP_455563.1| lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str.
CT18]
gi|16764424|ref|NP_460039.1| outer membrane protein [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|29142282|ref|NP_805624.1| lipoprotein [Salmonella enterica subsp. enterica serovar Typhi str.
Ty2]
gi|56413938|ref|YP_151013.1| lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. ATCC 9150]
gi|161614741|ref|YP_001588706.1| hypothetical protein SPAB_02493 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|167993437|ref|ZP_02574531.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|168237117|ref|ZP_02662175.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|168243853|ref|ZP_02668785.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168264745|ref|ZP_02686718.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168467504|ref|ZP_02701341.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194445877|ref|YP_002040268.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194448567|ref|YP_002045067.1| hypothetical protein SeHA_C1174 [Salmonella enterica subsp.
enterica serovar Heidelberg str. SL476]
gi|194736283|ref|YP_002114065.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197248455|ref|YP_002145935.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197263115|ref|ZP_03163189.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197362861|ref|YP_002142498.1| lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi
A str. AKU_12601]
gi|200389299|ref|ZP_03215910.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204929851|ref|ZP_03220872.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205352220|ref|YP_002226021.1| lipoprotein [Salmonella enterica subsp. enterica serovar Gallinarum
str. 287/91]
gi|207856410|ref|YP_002243061.1| lipoprotein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|213161912|ref|ZP_03347622.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213417135|ref|ZP_03350279.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
gi|213425906|ref|ZP_03358656.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213611227|ref|ZP_03370053.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213646603|ref|ZP_03376656.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
gi|213857694|ref|ZP_03384665.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|224584428|ref|YP_002638226.1| lipoprotein [Salmonella enterica subsp. enterica serovar Paratyphi
C strain RKS4594]
gi|238911112|ref|ZP_04654949.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|289826796|ref|ZP_06545731.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|25350775|pir||AD0626 probable lipoprotein STY1086 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16419580|gb|AAL19998.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16502240|emb|CAD08191.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29137912|gb|AAO69473.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|56128195|gb|AAV77701.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|161364105|gb|ABX67873.1| hypothetical protein SPAB_02493 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194404540|gb|ACF64762.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194406871|gb|ACF67090.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194711785|gb|ACF91006.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195630028|gb|EDX48680.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197094338|emb|CAR59850.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|197212158|gb|ACH49555.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197241370|gb|EDY23990.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197289767|gb|EDY29128.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|199601744|gb|EDZ00290.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|204320845|gb|EDZ06046.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|205272001|emb|CAR36845.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205328520|gb|EDZ15284.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
4,[5],12:i:- str. CVM23701]
gi|205337125|gb|EDZ23889.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|205346842|gb|EDZ33473.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206708213|emb|CAR32513.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|224468955|gb|ACN46785.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|261246282|emb|CBG24090.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267992816|gb|ACY87701.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. 14028S]
gi|301157609|emb|CBW17101.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312912056|dbj|BAJ36030.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|322714056|gb|EFZ05627.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Choleraesuis str. A50]
gi|323129333|gb|ADX16763.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhimurium str. 4/74]
gi|326627265|gb|EGE33608.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9]
Length = 187
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + + Q + L + + L ++
Sbjct: 5 LVVIMAFWLASCSSGGENKSYYQLPIAQSGVQSTASQGNRLLWVEQVSVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAIR 133
++S ++ + W+ L + ++ L+AN + ++ V G D + +
Sbjct: 65 QTSDVQYVIANNNLWASPLDQQLRNTLVANL--SARLPGWVVASQPLGTTQD-TLNVTVT 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H+ L+ ++ FH+E +KD ++ L A+S+ ++
Sbjct: 122 GFHGRYDGK---VIVSGEWLLNHNGQLI-KRPFHIEASQQKDGYDEMVKVLASAWSQEAA 177
Query: 194 EIID 197
I D
Sbjct: 178 AIAD 181
>gi|271500192|ref|YP_003333217.1| hypothetical protein Dd586_1646 [Dickeya dadantii Ech586]
gi|270343747|gb|ACZ76512.1| protein of unknown function DUF330 [Dickeya dadantii Ech586]
Length = 188
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 62/178 (34%), Gaps = 10/178 (5%)
Query: 22 LCTSLSSCFFHNNPVNIYDLTESTKYDES----VQRHIQLIITEPITEKILNSEDIIVRS 77
L L++C Y L T+ S QL + I L I+ ++
Sbjct: 9 LVVVLAACSSPQKVY--YQLPAMTQGTASLSATPADSRQLWVAPVILTDSLAGNGIVFQT 66
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
S + + W+ L + +Q L ++ VV + + + +F+
Sbjct: 67 SAVRYTIATNNLWASPLDQQLQQALASSLRARLPGWNVVTAGVAGASASSLQINVTAFQG 126
Query: 138 NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D A+I + + +V + F E +D + +L + + +++ +I
Sbjct: 127 RFDGK-AVIQGD--WVLHSNKRIV-TQPFSFEVAQTEDGYDALVAALGKGWQQVAEQI 180
>gi|168821984|ref|ZP_02833984.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|205341480|gb|EDZ28244.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320085279|emb|CBY95063.1| Uncharacterized lipoprotein ymbA Flags: Precursor [Salmonella
enterica subsp. enterica serovar Weltevreden str.
2007-60-3289-1]
Length = 187
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 73/182 (40%), Gaps = 7/182 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + + Q + L + + L ++
Sbjct: 5 LVVIMAFWLASCSSGGENKSYYQLPIAQSGVQSTASQGNRLLWVEQVSVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVQYVIANNNLWASPLDQQLRNTLVANLSARLPSWVVASQPLGTTQD-TLNVTVTGF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D + +S + + H+ L+ ++ FH+E +KD ++ L A+S+ ++ I
Sbjct: 124 HGRYDGK---VIVSGEWLLNHNGQLI-KRPFHIEASQQKDGYDEMVKVLASAWSQEAAAI 179
Query: 196 ID 197
D
Sbjct: 180 AD 181
>gi|294635640|ref|ZP_06714116.1| putative outer membrane protein [Edwardsiella tarda ATCC 23685]
gi|291091023|gb|EFE23584.1| putative outer membrane protein [Edwardsiella tarda ATCC 23685]
Length = 189
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 73/190 (38%), Gaps = 8/190 (4%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
+ + I+ +L + C+ S ++ PV + S ++ + QL + +
Sbjct: 2 MKRGMILLAALVLSACSGAGSKQYYQLPV---EPAVSRAVTQTAAQTHQLWVQPVNVADL 58
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
L ++ + S ++ + W+ L + + L+A V G+ D
Sbjct: 59 LGGMGVVYQQSDVQFVTASNNLWASPLSQQLTQSLVAGLGAAMPGWLVSTQPLGMSQD-S 117
Query: 128 IISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ I +F D + ++ + + H ++ Q+ FH+ + D +++L +A
Sbjct: 118 LTVNINAFYGRYDGK---VVVAGEWLLTHQG-VLTQRAFHIVLPQQGDGYDALVRTLGQA 173
Query: 188 FSRISSEIID 197
+ + + +
Sbjct: 174 WQQEIAAMAG 183
>gi|226946439|ref|YP_002801512.1| hypothetical protein Avin_44160 [Azotobacter vinelandii DJ]
gi|226721366|gb|ACO80537.1| Conserved hypothetical protein [Azotobacter vinelandii DJ]
Length = 192
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/195 (14%), Positives = 71/195 (36%), Gaps = 14/195 (7%)
Query: 18 LAVLLCTSLSSCFFHNNPVN-IYDLTE-STKYDESVQRHIQLIITEPITEKILNSEDIIV 75
LA +L SL+ + PV Y L+ + + R + + ++++ +++
Sbjct: 4 LARVLVASLTLGGCASAPVERFYTLSAVAVADPATQPRAYSVTVDPVGVPEMVDRPQLVL 63
Query: 76 RSSPIEIQYLIGSQWSDKL----PRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
R + + +W+ L +++ L + + +DY++
Sbjct: 64 RLDANRVSIMEHERWATPLQSGIGQVVAANLTRLLGGAWVAAHPMSATT--ASDYRVTLD 121
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
++ FE A + + I +A + + + E + + +RA + +
Sbjct: 122 VQRFES-APGAAADLDVLWTIRSARGALVKAGRS-TLSEPPGGAGTEALVAAHDRALAAL 179
Query: 192 SSEIIDWTLSSLPLS 206
S +I +LP S
Sbjct: 180 SRDIA----RALPAS 190
>gi|261416604|ref|YP_003250287.1| protein of unknown function DUF330 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373060|gb|ACX75805.1| protein of unknown function DUF330 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302325905|gb|ADL25106.1| putative lipoprotein [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 198
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/193 (10%), Positives = 71/193 (36%), Gaps = 4/193 (2%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHN-NPVNIYDLTESTKYDESVQRHIQLIITEPITEK 66
+ K + A+L +L+ C + P Y ++ + ++ + + +
Sbjct: 1 MFKANRLLAVAALLSVFTLTGCLGGSTEPSRYYTVSAESISVAGATSDARIHVKKFTIDP 60
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
+I+ R SP + + W+ + +M+ + +V G D+
Sbjct: 61 AYQRTNIVYRESPYDFMFYDLDLWATRPEQMLTQVAGEYLIKSNMFKSVDLKPMG-KPDF 119
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG--QKVFHVEEKLEKDNKLHFIQSL 184
+++ + + E + +++++ +K + + + K + ++L
Sbjct: 120 ELLGNVDAIEEIDEGSSQEAHLAVQLTFRKVGEDAPLWEKRYDERQSMSKRDAHSAAEAL 179
Query: 185 NRAFSRISSEIID 197
++ +++ + ++
Sbjct: 180 SKLYAKYMQDALE 192
>gi|121607913|ref|YP_995720.1| putative lipoprotein [Verminephrobacter eiseniae EF01-2]
gi|121552553|gb|ABM56702.1| putative lipoprotein [Verminephrobacter eiseniae EF01-2]
Length = 228
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 49/132 (37%), Gaps = 16/132 (12%)
Query: 81 EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY--------ADYQIISAI 132
++ ++WS + L E G+ V+K + G + +
Sbjct: 92 QLHPYSHARWSQPPAQ---LLQQQLREQIGRRRAVLKADDGAAQSRGATRSGHLLLRVEL 148
Query: 133 RSFEINIDRHC---AIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
F + ++ + ++ SL GQ+VF +++ + + +L A
Sbjct: 149 EEFSHLFNSPTQSAGVVRLRATMVERTPTGESLRGQRVFIMQKPARSTDAAGGVAALAEA 208
Query: 188 FSRISSEIIDWT 199
++++SE+ +W
Sbjct: 209 STQLASELAEWV 220
>gi|298530602|ref|ZP_07018004.1| protein of unknown function DUF330 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298509976|gb|EFI33880.1| protein of unknown function DUF330 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 251
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 62/174 (35%), Gaps = 10/174 (5%)
Query: 31 FHNNPV--NIYDL-TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIG 87
P N + L T+ + + L + ++I+ R+ Q
Sbjct: 25 PKKKPPERNFFVLETKRQAGETWDEPRGILSVRGFDVSPGFRGKEIVYRTERGRSQSDFY 84
Query: 88 SQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS----FEINIDRHC 143
+Q+ M+ +++G V+ ADY + ++ S F+ D
Sbjct: 85 NQYFISPGPMLTDVSRQWLDDSGMFEAVISMGSHKEADYILEGSVTSLYGDFQ-EGDEPA 143
Query: 144 AIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+++ M ++ D ++ + + L H +Q LN+A +RI + +
Sbjct: 144 SVLRMQFLLLEDDRLDYHMLMHRTYKERVTLTGSGAEHVVQGLNKALTRILTRL 197
>gi|224418849|ref|ZP_03656855.1| hypothetical protein HcanM9_06195 [Helicobacter canadensis MIT
98-5491]
gi|253828162|ref|ZP_04871047.1| hypothetical protein HCAN_1522 [Helicobacter canadensis MIT
98-5491]
gi|313142367|ref|ZP_07804560.1| predicted protein [Helicobacter canadensis MIT 98-5491]
gi|253511568|gb|EES90227.1| hypothetical protein HCAN_1522 [Helicobacter canadensis MIT
98-5491]
gi|313131398|gb|EFR49015.1| predicted protein [Helicobacter canadensis MIT 98-5491]
Length = 183
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 27 SSCFFHNN-PVNIYDLTESTKYD--ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
S C PV+ Y L K +S+Q + L + + +N++ I R SP E+
Sbjct: 19 SGCISKEVLPVSYYQLEIPYKEVNCKSIQVYHWLGV---EAVEKINTQKIAYRQSPNEVA 75
Query: 84 YLIGSQWSDKLPRMIQLKLIAN 105
Y +QW + LP M+ ++
Sbjct: 76 YFAKNQWIESLPDMLDSLMLKA 97
>gi|168233438|ref|ZP_02658496.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194470371|ref|ZP_03076355.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194456735|gb|EDX45574.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205332396|gb|EDZ19160.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 187
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 35/184 (19%), Positives = 77/184 (41%), Gaps = 11/184 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + +S Q + L + + L ++
Sbjct: 5 LVVIMAFWLASCSSGGENKSYYQLPIAQSGVQSTTSQGNRLLWVEQVSVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAIR 133
++S ++ + W+ L + ++ L+AN + ++ V G D + +
Sbjct: 65 QTSDVQYVIANNNLWASPLDQQLRNTLVANL--SARLPGWVVASQPLGTTQD-TLNVTVT 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H+ L+ ++ FH+E +KD ++ L A+S+ ++
Sbjct: 122 GFHGRYDGK---VIVSGEWLLNHNGQLI-KRPFHIEASQQKDGYDEMVKVLASAWSQEAA 177
Query: 194 EIID 197
I D
Sbjct: 178 AIAD 181
>gi|62179587|ref|YP_216004.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|62127220|gb|AAX64923.1| putative outer membrane protein [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 187
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 75/184 (40%), Gaps = 11/184 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + + Q + L + + L ++
Sbjct: 5 LVVIMAFWLASCSSGGENKSYYQLPIAQSGVQSTASQGNRLLWVEQVSVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAIR 133
++S ++ + W+ L + ++ L+AN ++ V G D + +
Sbjct: 65 QTSDVQYVIANNNLWASPLDQQLRNTLVANLGA--RLPGWVVASQPLGTTQD-TLNVTVT 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H+ L+ ++ FH+E +KD ++ L A+S+ ++
Sbjct: 122 GFHGRYDGK---VIVSGEWLLNHNGQLI-KRPFHIEASQQKDGYDEMVKVLASAWSQEAA 177
Query: 194 EIID 197
I D
Sbjct: 178 AIAD 181
>gi|301629823|ref|XP_002944033.1| PREDICTED: hypothetical protein LOC100485307 [Xenopus (Silurana)
tropicalis]
Length = 204
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/203 (14%), Positives = 64/203 (31%), Gaps = 23/203 (11%)
Query: 18 LAVLLCTSLSSCFFHNNPV---NIYDLTESTKYDESVQRHI--QLIITEPITEK-ILNSE 71
+ V + C P +YDL + L + + N
Sbjct: 1 MVVFGAILVVGCGALPQPPARPQLYDLGPGPATAPATPGTGLPTLALADMDAPGGAGNGT 60
Query: 72 DIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD--- 125
++ R +++ ++WS ++Q +L G+ +V+P A
Sbjct: 61 AVVYRLAYADAQQLRPYQLARWSQPPTALVQQRLRERL---GEQRAIVQPQDRPLAPGSD 117
Query: 126 ---YQIISAIRSFEINIDRHC---AIITMSLKIINAHDN--SLVGQKVFHVEEKLEKDNK 177
+ + F ++ + + L+GQ+VF V+ +
Sbjct: 118 LPPVVLRLNLEEFSQVFASPERSNGMLRLRATLAEPVSGGERLLGQRVFVVQRPAPSADA 177
Query: 178 LHFIQSLNRAFSRISSEIIDWTL 200
+ +L A + ++E+ W L
Sbjct: 178 PGGVHALTEAADQAAAELAQWLL 200
>gi|260770296|ref|ZP_05879229.1| putative lipoprotein [Vibrio furnissii CIP 102972]
gi|260615634|gb|EEX40820.1| putative lipoprotein [Vibrio furnissii CIP 102972]
Length = 185
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 64/184 (34%), Gaps = 8/184 (4%)
Query: 19 AVLLCTSLSSCFFHNNPVN-IYDLTESTKYDESVQR--HIQLIITEPITEKILNSED-II 74
L L+ C + +Y L + E+ + L++ P+ + I+
Sbjct: 1 MFLAAALLAGCSSAPETTSALYLLPQPESQTETPEAVTDRPLLVVRPVELASYLNNRGIV 60
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAI 132
R+S ++ +QW+ L I ++IA+ V +D ++ ++
Sbjct: 61 YRTSESQVIQAKHNQWAQNLSEQITQRVIADLRQKQTHYWPVTVHNLLDQSSDDKLQLSL 120
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F N + + +I + + + + L+ + +++L + ++
Sbjct: 121 NKFNGNYQGNT-EVEGEWMLI-EANGKVKRRAPVKISVPLQDEGYDALVEALAASLDDLT 178
Query: 193 SEII 196
I
Sbjct: 179 DAIA 182
>gi|322616439|gb|EFY13348.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322619690|gb|EFY16565.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322622614|gb|EFY19459.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322629763|gb|EFY26538.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322632515|gb|EFY29261.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322636990|gb|EFY33693.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322641471|gb|EFY38109.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646063|gb|EFY42579.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322649635|gb|EFY46066.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654064|gb|EFY50387.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322658596|gb|EFY54858.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322663453|gb|EFY59655.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322670189|gb|EFY66329.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322671425|gb|EFY67547.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322676781|gb|EFY72848.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322682705|gb|EFY78724.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322686385|gb|EFY82367.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323195122|gb|EFZ80304.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323199804|gb|EFZ84893.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323202797|gb|EFZ87833.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323209068|gb|EFZ94005.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|323213658|gb|EFZ98446.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323217972|gb|EGA02687.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323222004|gb|EGA06391.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226577|gb|EGA10782.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323229773|gb|EGA13896.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323232998|gb|EGA17094.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323240733|gb|EGA24775.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323243049|gb|EGA27070.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323249788|gb|EGA33690.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323252740|gb|EGA36578.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323259153|gb|EGA42797.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323259977|gb|EGA43605.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323268023|gb|EGA51502.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323269871|gb|EGA53320.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
Length = 187
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 75/184 (40%), Gaps = 11/184 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + Q + L + + L ++
Sbjct: 5 LVVIMAFWLASCSSGGENKSYYQLPIVQSGVQSTASQGNRLLWVEQVSVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAIR 133
++S ++ + W+ L + ++ L+AN + ++ V G D + +
Sbjct: 65 QTSDVQYVIANNNLWASPLDQQLRNTLVANL--SARLPGWVVASQPLGTTQD-TLNVTVT 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H+ L+ ++ FH+E +KD ++ L A+S+ ++
Sbjct: 122 GFHGRYDGK---VIVSGEWLLNHNGQLI-KRPFHIEASQQKDGYDEMVKVLASAWSQEAA 177
Query: 194 EIID 197
I D
Sbjct: 178 AIAD 181
>gi|329113587|ref|ZP_08242367.1| Hypothetical protein APO_0361 [Acetobacter pomorum DM001]
gi|326697109|gb|EGE48770.1| Hypothetical protein APO_0361 [Acetobacter pomorum DM001]
Length = 232
Score = 51.5 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/142 (13%), Positives = 45/142 (31%), Gaps = 12/142 (8%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDII 74
+ ++ +L++C + ++Y L + + + + P L+ + I+
Sbjct: 24 GVAGLGVMAVTLTACSGGS--PSLYTLAVTPGQPQPG-GPRFVEVRLPTVASGLDRDRIV 80
Query: 75 VRSSPIEIQYLIGSQWSDKLP----RMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
S ++ WSD LP R++ L G V + +
Sbjct: 81 TADSGYKLTVSSADAWSDSLPAQISRVMAGDLAQRLPGTGVF--VENDTVATEPEAYVDM 138
Query: 131 AIRSFEINIDRHCAIITMSLKI 152
+I F + + +
Sbjct: 139 SISRFST---GPSGNVELDATL 157
>gi|328954042|ref|YP_004371376.1| protein of unknown function DUF330 [Desulfobacca acetoxidans DSM
11109]
gi|328454366|gb|AEB10195.1| protein of unknown function DUF330 [Desulfobacca acetoxidans DSM
11109]
Length = 206
Score = 51.5 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 70/202 (34%), Gaps = 17/202 (8%)
Query: 9 IKKKIISCSL---AVLLCTSLSSCFFHNNPVNIYDLTESTK-----YDESVQRHIQLIIT 60
+++ +SC L V++ S C + Y+L+ K ES ++ + I
Sbjct: 1 MRETPLSCGLPIILVIVAIFCSGCLSRSQTPRFYNLSAMQKDQVLVKSESPAQNAVIGIG 60
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN- 119
L + I+ R+S ++ +W L N G + + N
Sbjct: 61 PVNLADYLETSQIVTRTSDNQVGKAEYDRWVGSFKDNFVNVLAD---NIGFLLPTERINL 117
Query: 120 ----QGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD 175
++ DYQ+ + + + A + I LV + E +
Sbjct: 118 YPWRGNVFIDYQVTVDVVRCDGRL-GEAAWLESRWSIFTGPGKKLVQTMRSSISEPVTGA 176
Query: 176 NKLHFIQSLNRAFSRISSEIID 197
+ + + +RA +R+S EI
Sbjct: 177 DYSDLVAAQSRALARLSQEIAA 198
>gi|259908887|ref|YP_002649243.1| Putative lipoprotein protein [Erwinia pyrifoliae Ep1/96]
gi|224964509|emb|CAX56019.1| Putative lipoprotein protein [Erwinia pyrifoliae Ep1/96]
gi|283478880|emb|CAY74796.1| Uncharacterized lipoprotein ymbA precursor [Erwinia pyrifoliae DSM
12163]
gi|310767213|gb|ADP12163.1| Putative lipoprotein protein [Erwinia sp. Ejp617]
Length = 186
Score = 51.5 bits (122), Expect = 6e-05, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 73/181 (40%), Gaps = 8/181 (4%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLT-ESTKYDESVQRHIQ-LIITEPITEKILNSEDIIV 75
+ + L LS+C V Y L +T S IQ + + L ++
Sbjct: 5 IPIALALILSACSGTPKTVY-YQLPMAATSAAVSSTSVIQPVWVERVTLPDYLAGNGVVY 63
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+S+ ++ +QW+ L + +Q LI + + + G+ D + ++ F
Sbjct: 64 QSNDVQYVIAANNQWASPLDQQLQQTLIGSLSAALPGALISSAQPGLQHD-TLNVSVHDF 122
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D H A++ + I H+ L ++ F++ ++D +++L + +++ ++
Sbjct: 123 HGRYDGH-AVVR--GEWILEHNGKLF-KQPFNMALPQKEDGYDDLVRTLAAGWQQVAEQV 178
Query: 196 I 196
Sbjct: 179 A 179
>gi|59801672|ref|YP_208384.1| hypothetical protein NGO1321 [Neisseria gonorrhoeae FA 1090]
gi|239999392|ref|ZP_04719316.1| hypothetical protein Ngon3_07897 [Neisseria gonorrhoeae 35/02]
gi|240014569|ref|ZP_04721482.1| hypothetical protein NgonD_07969 [Neisseria gonorrhoeae DGI18]
gi|240081351|ref|ZP_04725894.1| hypothetical protein NgonF_08594 [Neisseria gonorrhoeae FA19]
gi|240113559|ref|ZP_04728049.1| hypothetical protein NgonM_08328 [Neisseria gonorrhoeae MS11]
gi|240116091|ref|ZP_04730153.1| hypothetical protein NgonPID1_07581 [Neisseria gonorrhoeae PID18]
gi|240118375|ref|ZP_04732437.1| hypothetical protein NgonPID_07918 [Neisseria gonorrhoeae PID1]
gi|240121091|ref|ZP_04734053.1| hypothetical protein NgonPI_04839 [Neisseria gonorrhoeae PID24-1]
gi|240123920|ref|ZP_04736876.1| hypothetical protein NgonP_08264 [Neisseria gonorrhoeae PID332]
gi|240126120|ref|ZP_04739006.1| hypothetical protein NgonSK_07879 [Neisseria gonorrhoeae SK-92-679]
gi|240128597|ref|ZP_04741258.1| hypothetical protein NgonS_08208 [Neisseria gonorrhoeae SK-93-1035]
gi|254494112|ref|ZP_05107283.1| lipoprotein [Neisseria gonorrhoeae 1291]
gi|260440099|ref|ZP_05793915.1| hypothetical protein NgonDG_03259 [Neisseria gonorrhoeae DGI2]
gi|268595212|ref|ZP_06129379.1| lipoprotein [Neisseria gonorrhoeae 35/02]
gi|268597452|ref|ZP_06131619.1| lipoprotein [Neisseria gonorrhoeae FA19]
gi|268599622|ref|ZP_06133789.1| lipoprotein [Neisseria gonorrhoeae MS11]
gi|268601759|ref|ZP_06135926.1| lipoprotein [Neisseria gonorrhoeae PID18]
gi|268604088|ref|ZP_06138255.1| lipoprotein [Neisseria gonorrhoeae PID1]
gi|268682545|ref|ZP_06149407.1| lipoprotein [Neisseria gonorrhoeae PID332]
gi|268684708|ref|ZP_06151570.1| lipoprotein [Neisseria gonorrhoeae SK-92-679]
gi|268686986|ref|ZP_06153848.1| lipoprotein [Neisseria gonorrhoeae SK-93-1035]
gi|291043387|ref|ZP_06569110.1| lipoprotein [Neisseria gonorrhoeae DGI2]
gi|293398691|ref|ZP_06642869.1| hypothetical protein NGNG_01356 [Neisseria gonorrhoeae F62]
gi|59718567|gb|AAW89972.1| conserved hypothetical protein [Neisseria gonorrhoeae FA 1090]
gi|226513152|gb|EEH62497.1| lipoprotein [Neisseria gonorrhoeae 1291]
gi|268548601|gb|EEZ44019.1| lipoprotein [Neisseria gonorrhoeae 35/02]
gi|268551240|gb|EEZ46259.1| lipoprotein [Neisseria gonorrhoeae FA19]
gi|268583753|gb|EEZ48429.1| lipoprotein [Neisseria gonorrhoeae MS11]
gi|268585890|gb|EEZ50566.1| lipoprotein [Neisseria gonorrhoeae PID18]
gi|268588219|gb|EEZ52895.1| lipoprotein [Neisseria gonorrhoeae PID1]
gi|268622829|gb|EEZ55229.1| lipoprotein [Neisseria gonorrhoeae PID332]
gi|268624992|gb|EEZ57392.1| lipoprotein [Neisseria gonorrhoeae SK-92-679]
gi|268627270|gb|EEZ59670.1| lipoprotein [Neisseria gonorrhoeae SK-93-1035]
gi|291012993|gb|EFE04976.1| lipoprotein [Neisseria gonorrhoeae DGI2]
gi|291611162|gb|EFF40259.1| hypothetical protein NGNG_01356 [Neisseria gonorrhoeae F62]
gi|317164641|gb|ADV08182.1| hypothetical protein NGTW08_1214 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 172
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 73/189 (38%), Gaps = 17/189 (8%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+ ++ P I W+D L M++ L F T V ++ D +
Sbjct: 57 -----VYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRTFVPASRSGSTD-KW 110
Query: 129 ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 111 TVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALEQGL 163
Query: 189 SRISSEIID 197
+ + ++++
Sbjct: 164 KQAAQQMVE 172
>gi|242310199|ref|ZP_04809354.1| predicted protein [Helicobacter pullorum MIT 98-5489]
gi|239523496|gb|EEQ63362.1| predicted protein [Helicobacter pullorum MIT 98-5489]
Length = 183
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 68/182 (37%), Gaps = 17/182 (9%)
Query: 12 KIISCSLAVLLCTSLSSCFFHN-NPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
K I ++V++ LS C P+N Y K + + + + E +++
Sbjct: 2 KAIVWLISVIVSVLLSGCVGKEIAPINHYQFEMEHKEVKCAKMELYGWLGI-EAEAKIDT 60
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA-DYQII 129
I P +++Y ++W D LP ++ + ++ V + N + A D Q +
Sbjct: 61 SKIAYIKEPNKVEYFAKNRWIDNLPNLLDVLVLK----------VARENCIVLAKDKQFL 110
Query: 130 SA---IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ + +++ D + + + + +E + K I+++N
Sbjct: 111 TDTLRLYILDLHYDENLNSAVFEALLEQTKGEQIEQFWILETKE-VSKGGFEEIIRAMNE 169
Query: 187 AF 188
+
Sbjct: 170 SV 171
>gi|198244695|ref|YP_002214998.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|197939211|gb|ACH76544.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
Length = 187
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/184 (18%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + + Q + L + + L ++
Sbjct: 5 LVVIMAFWLASCSSGGENKSYYQLPIAQSGVQSTASQGNRLLWVEQVSVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAIR 133
++S ++ + W+ L + ++ L+AN + ++ V G D + +
Sbjct: 65 QASDVQYVIANNNLWASPLDQQLRNTLVANL--SARLPGWVVASQPLGTTQD-TLNVTVT 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H+ L+ ++ FH+E +KD ++ L A+S+ ++
Sbjct: 122 GFHGRYDGK---VIVSGEWLLNHNGQLI-KRPFHIEASQQKDGYDEMVKVLASAWSQEAA 177
Query: 194 EIID 197
I D
Sbjct: 178 AIAD 181
>gi|114798421|ref|YP_761596.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444]
gi|114738595|gb|ABI76720.1| putative lipoprotein [Hyphomonas neptunium ATCC 15444]
Length = 206
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/162 (17%), Positives = 55/162 (33%), Gaps = 9/162 (5%)
Query: 28 SCFFHNNPVN-IYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLI 86
+P N +Y + + + Q + + EP ++L + I+Y+
Sbjct: 22 GIIPQRDPANALYRIGP---LEPAHQLSASVTVREPEASRLLAGRFMSAEDETGAIRYVR 78
Query: 87 GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ-GIYADYQIISAIRSFEINIDRHCAI 145
QWSD+ ++Q ++ G V P Q G +Y+ I + + A
Sbjct: 79 SIQWSDRSTSLMQEAVLDLLNGEG--GNVALPAQAGAVTEYEFSWRISDL--TLKGNTAR 134
Query: 146 ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ I+ + S+ Q + Q+L A
Sbjct: 135 CRLEGAILKGRERSIQRQTSISTSATASGNTDAARAQALVEA 176
>gi|311107308|ref|YP_003980161.1| hypothetical protein AXYL_04127 [Achromobacter xylosoxidans A8]
gi|310761997|gb|ADP17446.1| hypothetical protein AXYL_04127 [Achromobacter xylosoxidans A8]
Length = 238
Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/206 (14%), Positives = 70/206 (33%), Gaps = 5/206 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEP 62
+ ++ + SL L + + + V LI +P
Sbjct: 20 RSAGRLTPRLRPVLSLLALTAALAGCGSSAPVQYHTLQVPAAQAPGAGVAPANFLIEVQP 79
Query: 63 ITEKI-LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENN-GKISTVVKPNQ 120
+ + ++VR+ + L +WS L ++ L + G + +
Sbjct: 80 VNISTQADQPQLMVRTGEGSLAALYSERWSSPLGDELRGALSDALKRELGALDVQLVKPG 139
Query: 121 GIYADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
A +++ + ++ FE+ R + T ++ +N + L+ + V V E + ++
Sbjct: 140 PGAAVWRVQTDVQRFELESGRMAQLDATWRVRPVNMKGSGLLCRSV--VTEPVTEEGVPA 197
Query: 180 FIQSLNRAFSRISSEIIDWTLSSLPL 205
I + RA ++ + P
Sbjct: 198 LIAAQQRAVVSLAGAMASAIRGQTPA 223
>gi|91226895|ref|ZP_01261492.1| hypothetical protein V12G01_15962 [Vibrio alginolyticus 12G01]
gi|91188858|gb|EAS75143.1| hypothetical protein V12G01_15962 [Vibrio alginolyticus 12G01]
Length = 192
Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 70/186 (37%), Gaps = 10/186 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPV-NIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSED-I 73
L++ L L+ C +Y L ++ S Q ++ P+T +++ I
Sbjct: 7 LSIALFVGLTGCSSAPQTKGAMYLLPKAEPVTLSSSDIAQRPTLVVRPVTLASYLNDNGI 66
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY--ADYQIISA 131
+ R+S ++ +QW+ + I +++A + N + + ++
Sbjct: 67 VYRTSETQVIQAKHNQWAHSISEQITQRVVAELRQKQSHYWPTEMNNLLDQSGEAKLQLT 126
Query: 132 IRSFEINIDRHCAIITMSLK-IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
+ F + + I + + ++ + + + + L+ + + +L+
Sbjct: 127 LNKFNGSYKGN---IEIEGEWLLINAEGKVENSAPIQISKPLQDEGYEALVNALSIGLES 183
Query: 191 ISSEII 196
++S+I
Sbjct: 184 LTSDIA 189
>gi|134096151|ref|YP_001101226.1| putative lipoprotein [Herminiimonas arsenicoxydans]
gi|133740054|emb|CAL63105.1| Conserved hypothetical protein; putative exported protein
[Herminiimonas arsenicoxydans]
Length = 194
Score = 51.1 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 64/196 (32%), Gaps = 13/196 (6%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI--QLIITEPITEKILNSEDIIV 75
LA L+ C +++DL + + I E L+S+ +
Sbjct: 2 LAFAGSILLTGCAVGPQSASLFDLGPLHTQGSAATETPLPAISIAEITAPVWLDSQMMFY 61
Query: 76 R---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
R + + + S+W+ ++ L+L + G + +
Sbjct: 62 RLNYDNNQQPRAYATSKWTMAPAQLFLLRLKSRLSQAGGVVVPASDGAVNLP--VLRIEA 119
Query: 133 RSFEINID---RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
F D + A I M + + L QK+F + + +L A
Sbjct: 120 DDFSQVFDSAHQSSAHIAMRASLFDGRT--LRAQKMFVKQLPAASADAQGGAAALALASD 177
Query: 190 RISSEIIDWTLSSLPL 205
I +E+ W L++LP
Sbjct: 178 AIINEMAVW-LATLPA 192
>gi|88812233|ref|ZP_01127484.1| hypothetical protein NB231_02498 [Nitrococcus mobilis Nb-231]
gi|88790484|gb|EAR21600.1| hypothetical protein NB231_02498 [Nitrococcus mobilis Nb-231]
Length = 208
Score = 51.1 bits (121), Expect = 8e-05, Method: Composition-based stats.
Identities = 31/177 (17%), Positives = 60/177 (33%), Gaps = 11/177 (6%)
Query: 27 SSCFFHNN-PVNIYDLT-ESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
S C P + Y L S + +L I L S+ I+++++ + I
Sbjct: 22 SGCAGAPTVPEHRYLLGLTSRPAAPAASSEHRLWIASLQLAPFLRSDGIVMQTNDVAIHQ 81
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-----QIISAIRSFEINI 139
W++ L ++ L K+ V + A ++ + F
Sbjct: 82 GRDHLWAENLATQLRRSLREELAR--KLPRVQVLDDSESATTGEPLPRLEVEVDGFHGRY 139
Query: 140 DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
D I + + L+ + F VE L D ++SL A+ ++ +I
Sbjct: 140 DG--VAIVVGQWRLRDGTGRLLAARQFSVERPLPADGYQALVESLAAAWRGVADQIA 194
>gi|257094945|ref|YP_003168586.1| hypothetical protein CAP2UW1_3397 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047469|gb|ACV36657.1| protein of unknown function DUF330 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 201
Score = 51.1 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 64/186 (34%), Gaps = 14/186 (7%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
L VLL +L+ C + P Y L D + + I++ +V+
Sbjct: 12 LTVLLAATLAGC--ASPPSRFYTLAAIAGPDGGAPAAYAVAVDSVSIPAIVDRPQFVVQK 69
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG-----IYADYQIISAI 132
P + ++W+ L I L AN G + + G + Y++ +
Sbjct: 70 GPNRVGIDEFNRWAAPLAANIASTLAANL---GVLLGTSRVVAGPLAANVDPAYRVTVDV 126
Query: 133 RSFEINIDRHCAIITMSLK-IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
+ FE +++ ++ + + E ++ + + +RA + I
Sbjct: 127 QRFESV---PGETVSLDAVWLLRRPGAAATTGGRSTLREAVQGEGYEALAAAHSRALAGI 183
Query: 192 SSEIID 197
S +I
Sbjct: 184 SRDIAA 189
>gi|330901765|gb|EGH33184.1| hypothetical protein PSYJA_31261 [Pseudomonas syringae pv. japonica
str. M301072PT]
Length = 204
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 16/198 (8%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + L +C + + Y L T Q + I ++ +
Sbjct: 7 LMVLAAAVGLGAC--TSTQTHYYTLIAPMSATSTAAGKPMPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P I + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLEHRFGSRDMAGLPKNSDQPTLSIRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGNYALIDVVWTLGLREAGATAGSKRRSLTCSSVIREQAGEGMENLIIAHQKA 183
Query: 188 FSRISSEII----DWTLS 201
+R++ +I +WT
Sbjct: 184 VARLADKIAATATNWTAQ 201
>gi|66046277|ref|YP_236118.1| hypothetical protein Psyr_3046 [Pseudomonas syringae pv. syringae
B728a]
gi|63256984|gb|AAY38080.1| Protein of unknown function DUF330 [Pseudomonas syringae pv.
syringae B728a]
Length = 207
Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 61/201 (30%), Gaps = 16/201 (7%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + L +C + + Y L T S Q + I ++ +
Sbjct: 7 LMVLAAAVGLGAC--TSTQTHYYTLIAPMSATSTAASKPMPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P + + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERRFGSRDMAGLPKNSDQPTLSLRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGNYALIDVVWTLGLREAGATAGSKRQSLTCSSVIREQAGEGMENLIMAHQKA 183
Query: 188 FSRISSEIID----WTLSSLP 204
++++ +I WT
Sbjct: 184 VAQLADKIAATAASWTAQRAS 204
>gi|104783891|ref|YP_610389.1| hypothetical protein PSEEN4964 [Pseudomonas entomophila L48]
gi|95112878|emb|CAK17606.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 225
Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/178 (15%), Positives = 63/178 (35%), Gaps = 6/178 (3%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
+ LS C H PV +Y L S + +++ L E + R +
Sbjct: 1 MTGLLGLSGCSMHQ-PVALYQLDSGDPAQPSQAAGMAVVLGPVSVADYLQRETFLQRQTD 59
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKP-NQGIYADYQIISAIRSFEI 137
+ +W+ L I L+ V+ P + G D Q++ +I +
Sbjct: 60 GSLTAATDGRWAGSLSSDIDQLLVRQLAWRLDSQRVVLAPASTGFTPDVQVLLSITRLDS 119
Query: 138 NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
AI+ ++++ + ++ H+E+ +Q+ + +++ ++
Sbjct: 120 -GKNQPAILDAQWRLLDRR-GQVRDNRIVHLEQPHAGSE-SAQVQAQGQLLQKLAEQL 174
>gi|90413934|ref|ZP_01221919.1| hypothetical protein P3TCK_07711 [Photobacterium profundum 3TCK]
gi|90324996|gb|EAS41511.1| hypothetical protein P3TCK_07711 [Photobacterium profundum 3TCK]
Length = 197
Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEP-ITEKILNSEDI 73
V L+ C + VN Y L + + + L++ P + L +
Sbjct: 5 LLFMVAATAFLAGCSSQPDAVNSYLLPAGAQSITSQIGSNQPLLVIRPVEMAEHLAGTGL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISA 131
+ + S E+ + W++ + + + ++ + N + +T + P Y ++
Sbjct: 65 VYQVSDTEVVQAQQNLWAESIGKQLTRRINQDLRNKQSQFWTTELTPALSTYNSPRLQVK 124
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
I F + A I+ ++ D L G F + L+++ +++L+ +R+
Sbjct: 125 IDEFNGHYSG-MAKISGEWMLVK-SDGDLNGVYPFKFQVPLQEEGYDAQVKALSEGINRL 182
Query: 192 SSEII 196
+++I
Sbjct: 183 TTQIA 187
>gi|294843018|ref|ZP_06787701.1| putative signal peptide [Acinetobacter sp. 6014059]
gi|322507466|gb|ADX02920.1| putative signal peptid [Acinetobacter baumannii 1656-2]
Length = 236
Score = 50.7 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 79/199 (39%), Gaps = 25/199 (12%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK-ILNSEDIIV 75
S +L ++++C P N Y LT K +Q+I P+ L+ +++
Sbjct: 21 SGVLLTAIAMTACSSSPTP-NYYTLTP--KVTPVSNSTVQVIEVLPVGIPDRLDRAPLVL 77
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----YQIISA 131
+ S + L +W+ L ++ L A + K+ + + G+ + Y++ +
Sbjct: 78 QESNGKSTVLDNERWTSTLGTQLRDTLSAGLQQ--KLGAIDSYSSGLSGNNQPLYRVSTD 135
Query: 132 IRSFEINIDRHCAI-ITMSLK------IINAHDNSLVGQK------VFHVEEKLEKD--N 176
F+I + + + ++ +K + + + ++ + ++ +++
Sbjct: 136 FSHFDIVDNSNINVAVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKK 195
Query: 177 KLHFIQSLNRAFSRISSEI 195
+ + N A S+I + I
Sbjct: 196 MEAIVSASNEAMSQIINTI 214
>gi|330939127|gb|EGH42554.1| hypothetical protein PSYPI_09145 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 207
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 61/199 (30%), Gaps = 16/199 (8%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + L +C + + Y L T S Q + I ++ +
Sbjct: 7 LMVLAAAVGLGAC--TSTQTHYYTLIAPMSATSTAASKPMPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P I + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERRFGSRDMAGLPKNSDQPTLSIRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGNYALIDVVWTLGLREAGATAGSKRQSLTCSSVIREEAGEGMENLIIAHQKA 183
Query: 188 FSRISSEIID----WTLSS 202
++++ +I WT
Sbjct: 184 VAQLADKIAATAASWTAQR 202
>gi|330980815|gb|EGH78918.1| hypothetical protein PSYAP_19941 [Pseudomonas syringae pv. aptata
str. DSM 50252]
Length = 207
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 61/201 (30%), Gaps = 16/201 (7%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + L +C + + Y L T S Q + I ++ +
Sbjct: 7 LMVLAAAVGLGAC--TSTQTHYYTLIAPMSATSTAASKPMPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P I + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERRFGSRDMAGLPKNSDQPTLSIRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGNYALIDVVWTLGLREAGATAGSKRQSLTCSSVIREEAGEGMENLIIAHQKA 183
Query: 188 FSRISSEI----IDWTLSSLP 204
++++ +I WT
Sbjct: 184 VAQLADKIAVTAASWTAQRAS 204
>gi|330969874|gb|EGH69940.1| hypothetical protein PSYAR_05220 [Pseudomonas syringae pv. aceris
str. M302273PT]
Length = 207
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 60/201 (29%), Gaps = 16/201 (7%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + L +C + + Y L T S Q + I ++ +
Sbjct: 7 LMVLAAAVGLGAC--TSTQTHYYTLIAPMSATSTAASKPMPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P + + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERRFGSRDMAGLPKNSDQPTLSLRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGNYALIDVVWTLGLREAGATAGSKRQSLTCSSVIREQAGEGMENLIMAHQKA 183
Query: 188 FSRISSEIID----WTLSSLP 204
++++ I WT
Sbjct: 184 VAQLADRIAATAASWTAQRAS 204
>gi|156975125|ref|YP_001446032.1| hypothetical protein VIBHAR_02852 [Vibrio harveyi ATCC BAA-1116]
gi|156526719|gb|ABU71805.1| hypothetical protein VIBHAR_02852 [Vibrio harveyi ATCC BAA-1116]
Length = 189
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 71/184 (38%), Gaps = 8/184 (4%)
Query: 20 VLLCTSLSSCFFHNNPV-NIYDLTESTKY---DESVQRHIQLIITEPITEKILNSEDIIV 75
+L+ L+ C +Y L E++ D ++ + QL++ L I+
Sbjct: 6 LLISALLAGCSSAPEDSGALYVLPEASSTKVSDTAIAQRPQLVVRPVELASYLADSGIVY 65
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY--ADYQIISAIR 133
R+S +I +QW+ + I ++I + V+ N + + +++ ++
Sbjct: 66 RTSETKIVQAKHNQWAHNISEQITQRIIDELRSKQSQYWPVEVNNQLDQSGENKLLLSLS 125
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F + + A I I++ + + + L+ D + +L+ + ++
Sbjct: 126 KFNGSYQGN-AEIEGEWLIVDE-NGKVKNSAPVKINMPLQDDGYDALVDALSVGLNNLTD 183
Query: 194 EIID 197
+I
Sbjct: 184 QIAA 187
>gi|120609012|ref|YP_968690.1| putative lipoprotein [Acidovorax citrulli AAC00-1]
gi|120587476|gb|ABM30916.1| putative lipoprotein [Acidovorax citrulli AAC00-1]
Length = 220
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/194 (14%), Positives = 60/194 (30%), Gaps = 23/194 (11%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQLI-ITEPI--- 63
+ + + +LA + S P ++YD T +R L I P
Sbjct: 8 TRARGLWTALAAAALMAGCSALPAPPPRADVYDFGPGTLAQAPGERGAPLPPIALPEVAV 67
Query: 64 TEKILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+ S ++ R P ++ ++WS +++Q L G V+ +
Sbjct: 68 AGPVEGSTAVLYRLAYDDPRHLRPYGQARWSQPPAQLVQQALRDQL---GLRRAVLMGEE 124
Query: 121 GIY-------ADYQIISAIRSFEINIDRHCA---IITMSLKIINA--HDNSLVGQKVFHV 168
G + I F A ++ + + ++ LV Q+VF +
Sbjct: 125 GAAQLVDTGKPPAVLRVEIEEFSQVFQAPKASTGVLRLRASLADSTQAGEKLVAQRVFVI 184
Query: 169 EEKLEKDNKLHFIQ 182
+ +
Sbjct: 185 QRPAPTPDARGGTH 198
>gi|83312111|ref|YP_422375.1| hypothetical protein amb3012 [Magnetospirillum magneticum AMB-1]
gi|82946952|dbj|BAE51816.1| Uncharacterized protein conserved in bacteria [Magnetospirillum
magneticum AMB-1]
Length = 206
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/171 (12%), Positives = 55/171 (32%), Gaps = 7/171 (4%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHIQLIITEPITE-KILNSEDIIVRSSPIEIQYLIGSQW 90
+ P+ + L+ + L+ PI + +N E++++ +++ G +W
Sbjct: 23 ASTPLRYHALSSGPTAPLASGSAALLVEVLPIAVPERINREELVLSGPGGQLEVRAGDRW 82
Query: 91 SDKLPR----MIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAII 146
+ L ++ L + + Y++ + E R A+
Sbjct: 83 AAPLADEMRQLVDESLWRHLRAADIYVAPLAITGSGLPQYRLALRLERLEATPGRQ-AVA 141
Query: 147 TMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
S + + E L + + L RA +R++ +
Sbjct: 142 EASWTVRRLPQGQPAICRT-GATEPLPDASTEAAVAGLARASARLAEAVAA 191
>gi|315181365|gb|ADT88278.1| hypothetical lipoprotein [Vibrio furnissii NCTC 11218]
Length = 185
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/184 (13%), Positives = 63/184 (34%), Gaps = 8/184 (4%)
Query: 19 AVLLCTSLSSCFFHNNPVN-IYDLTESTKYDESVQR--HIQLIITEPITEKILNSED-II 74
L L+ C + +Y L + ++ + L++ P+ + I+
Sbjct: 1 MFLAAALLAGCSSAPETTSALYLLPQPESQTQTAEAVTDRPLLVVRPVELASYLNNRGIV 60
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAI 132
R+S ++ +QW+ L I ++IA+ V D ++ ++
Sbjct: 61 YRTSESQVIQAKHNQWAQNLSEQITQRVIADLRQKQTHYWPVTVHNLLDQSNDDKLQLSL 120
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F N + + +I + + + + L+ + +++L + ++
Sbjct: 121 NKFNGNYQGNT-EVEGEWMLI-EANGKVKRRAPVKISVPLQDEGYDALVEALAASLDDLT 178
Query: 193 SEII 196
I
Sbjct: 179 DAIA 182
>gi|302185703|ref|ZP_07262376.1| hypothetical protein Psyrps6_05138 [Pseudomonas syringae pv.
syringae 642]
Length = 207
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/201 (15%), Positives = 61/201 (30%), Gaps = 16/201 (7%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + L +C + + Y L T S Q + I ++ +
Sbjct: 7 LMVLAAALGLGAC--TSTQTHYYTLIAPMGATSTAASKPMPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P I + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERRFGSRDMAGLPKNSDQPTLSIRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGNYALIDVVWTLGLRDAGATAGSKRQSLTCSSVIREQAGEGMENLIIAHQKA 183
Query: 188 FSRISSEIID----WTLSSLP 204
++++ +I WT
Sbjct: 184 VAQLADKIAATASSWTAQRSS 204
>gi|254805427|ref|YP_003083648.1| conserved hypthetical lipoprotein [Neisseria meningitidis alpha14]
gi|254668969|emb|CBA07275.1| conserved hypthetical lipoprotein [Neisseria meningitidis alpha14]
gi|325128714|gb|EGC51578.1| putative lipoprotein [Neisseria meningitidis N1568]
Length = 172
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADY 126
+ ++ P I W+D L M++ L F + +I +
Sbjct: 57 -----VYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTE--- 108
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 109 KWTVYIDAFQGSYTGKT-LISGYAVLPDGMN------RPFHIETEQQGDGYAAMTAALEQ 161
Query: 187 AFSRISSEIID 197
+ + ++++
Sbjct: 162 GLKQAAQQMVE 172
>gi|237752257|ref|ZP_04582737.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
gi|229376499|gb|EEO26590.1| predicted protein [Helicobacter winghamensis ATCC BAA-430]
Length = 182
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/190 (14%), Positives = 62/190 (32%), Gaps = 15/190 (7%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKY---DESVQRHIQLIITEPITE 65
+ + ++ + S CF + Y++ + + L+ +
Sbjct: 1 MFRGLMQIAWIASFILVFSGCFGKMPQIQYYEIEALNGVKLESKKDSKPRTLVWEISVAS 60
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
K + S+ I +++ I Y + W + M+ + N G +++ V + +
Sbjct: 61 K-IASKKIAYKNNANSIAYFSKNAWIEPFSVMVNSLALKIAGNYGILNSQVSQDSKEH-- 117
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
I + + R I I + S+ E +E + I+
Sbjct: 118 --IKINVLDCYFDTQRESVFIRF---FIESSKGSVF----IEKVELVESGGFIQIIKGFE 168
Query: 186 RAFSRISSEI 195
RA + +EI
Sbjct: 169 RALNAGFAEI 178
>gi|309378442|emb|CBX22937.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 172
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPTTQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADY 126
+ ++ P I W+D L M++ L F + +I +
Sbjct: 57 -----VYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTE--- 108
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 109 KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALEQ 161
Query: 187 AFSRISSEIID 197
+ + ++++
Sbjct: 162 GLKQAAQQMVE 172
>gi|262393800|ref|YP_003285654.1| putative lipoprotein [Vibrio sp. Ex25]
gi|262337394|gb|ACY51189.1| putative lipoprotein [Vibrio sp. Ex25]
Length = 192
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/186 (12%), Positives = 68/186 (36%), Gaps = 10/186 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPV-NIYDLTESTKYDESVQRHIQ--LIITEPITEKI-LNSEDI 73
L++ L L+ C +Y L ++ S Q ++ P+ LN I
Sbjct: 7 LSIALFVGLTGCSSAPETKGALYLLPKAEPVTLSSSDISQRPTLVVRPVKLASYLNDSGI 66
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD--YQIISA 131
+ R+S ++ +QW+ + I +++ + + N + + ++
Sbjct: 67 VYRTSETQVIQARNNQWAHSISEQITQRVVTELRHKQTHYWPTEMNNLLDQNDEAKLQLT 126
Query: 132 IRSFEINIDRHCAIITMSLK-IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
+ F + + I + + ++ + + + + L+ + + +L+
Sbjct: 127 LNKFNGSYKGN---IEIEGEWLLINAEGKVEKSAPIQISQPLQDEGYGALVDALSVGLEE 183
Query: 191 ISSEII 196
++S+I
Sbjct: 184 LTSDIA 189
>gi|325204634|gb|ADZ00088.1| putative lipoprotein [Neisseria meningitidis M01-240355]
Length = 172
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 71/189 (37%), Gaps = 17/189 (8%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTMQSTQYFVLPDSRYI----RPATQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+ ++ P + W+D L M++ L F + P + +
Sbjct: 57 -----VYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSAR-IFVPASRSGSTEKW 110
Query: 129 ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 111 TVYIDAFQGSYTGKT-LISGYAVLPDGMN------RPFHIETEQQGDGYAAMTAALEQGL 163
Query: 189 SRISSEIID 197
+ + ++++
Sbjct: 164 KQAAQQMVE 172
>gi|269961747|ref|ZP_06176107.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269833530|gb|EEZ87629.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 189
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 75/185 (40%), Gaps = 10/185 (5%)
Query: 20 VLLCTSLSSCFFHNN-PVNIYDLTESTKY---DESVQRHIQLIITEPITEKILNSED-II 74
+L+ L+ C +Y L E++ D + + QL++ P+ S+ I+
Sbjct: 6 LLISALLAGCSSAPEDTGALYVLPEASSAKVSDTMISQRPQLVV-RPVELASYLSDSGIV 64
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI-YADY-QIISAI 132
R+S +I +QW+ + I ++I + V+ N + +D ++ ++
Sbjct: 65 YRASETQIIQAKHNQWAHSISEQITTRVIDELRSKQSQYWPVEVNNLLDQSDESKLQLSL 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F + + + A I +++A + + + L+ + + +L+ + ++
Sbjct: 125 SKFNGSYEGN-AEIEGEWLLVDA-NGKVKTSAPVKISMPLQDEGYDALVDALSVGLNNLT 182
Query: 193 SEIID 197
+I
Sbjct: 183 DQIAA 187
>gi|161503856|ref|YP_001570968.1| hypothetical protein SARI_01944 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865203|gb|ABX21826.1| hypothetical protein SARI_01944 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 187
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 75/184 (40%), Gaps = 11/184 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + + Q + L + + L ++
Sbjct: 5 LVVIMAFWLASCSSSGENKSYYQLPIAQSGVQSTASQGNRLLWVEQVSVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAIR 133
++S ++ + W+ L + ++ L+AN + ++ V G D + +
Sbjct: 65 QTSDVQYVIANNNLWASPLDQQLRNTLVANL--STRLPGWIVASQPLGTTQD-TLNVTVT 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H+ L+ ++ FH+E +KD ++ L +S+ ++
Sbjct: 122 GFHGRYDGK---VIVSGEWLLNHNGQLI-KRPFHIEASQQKDGYDEMVKVLASVWSQEAT 177
Query: 194 EIID 197
+ D
Sbjct: 178 AMAD 181
>gi|304386850|ref|ZP_07369114.1| lipoprotein [Neisseria meningitidis ATCC 13091]
gi|261392103|emb|CAX49600.1| conserved hypothetical lipoprotein [Neisseria meningitidis 8013]
gi|304339104|gb|EFM05194.1| lipoprotein [Neisseria meningitidis ATCC 13091]
gi|308389794|gb|ADO32114.1| putative lipoprotein [Neisseria meningitidis alpha710]
gi|325130706|gb|EGC53445.1| putative lipoprotein [Neisseria meningitidis OX99.30304]
gi|325136678|gb|EGC59278.1| putative lipoprotein [Neisseria meningitidis M0579]
gi|325142829|gb|EGC65198.1| putative lipoprotein [Neisseria meningitidis 961-5945]
gi|325144934|gb|EGC67218.1| putative lipoprotein [Neisseria meningitidis M01-240013]
gi|325198770|gb|ADY94226.1| putative lipoprotein [Neisseria meningitidis G2136]
gi|325201669|gb|ADY97123.1| putative lipoprotein [Neisseria meningitidis M01-240149]
gi|325208595|gb|ADZ04047.1| putative lipoprotein [Neisseria meningitidis NZ-05/33]
Length = 172
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 71/192 (36%), Gaps = 23/192 (11%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF---ENNGKISTVVKPNQGIYAD 125
+ ++ P + W+D L M++ L F +N +
Sbjct: 57 -----VYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDNTRIFVPASRSGSTE--- 108
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ I +F+ + +I+ + + + + FH+E + + D +L
Sbjct: 109 -KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALE 160
Query: 186 RAFSRISSEIID 197
+ + + ++++
Sbjct: 161 QGLKQAAQQMVE 172
>gi|152996942|ref|YP_001341777.1| hypothetical protein Mmwyl1_2931 [Marinomonas sp. MWYL1]
gi|150837866|gb|ABR71842.1| protein of unknown function DUF330 [Marinomonas sp. MWYL1]
Length = 198
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 72/191 (37%), Gaps = 18/191 (9%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITE-PITEK-ILNSEDIIV 75
L VL+ + C P Y L ++ ++ VQ ++ + PI L +I++
Sbjct: 9 LLVLISWMMIGCATPTPPSKEYLLMDTGLHNTQVQVTKKISVQLMPIVVANYLAGNEIVL 68
Query: 76 RSSPIEIQYLIGSQWSDK----LPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
+ ++ + W++ L R+ Q +L N P+ I +
Sbjct: 69 VTKQGDVHRSQSNLWAESLSPQLTRLTQQRLEKALPNITWFGGQRLPSYAIA---LLNIE 125
Query: 132 IRSFEINIDRHCAIITMSLKI-INAHDNSLVGQKVFHVEEKLEKDNKLHFIQS-----LN 185
+ F +++ +I +S + + + L F V+ KL+ D +Q+ +
Sbjct: 126 VDDFYADLEG---MIHISGRWQVISATGELSASNTFEVQRKLKSDGYSTMVQTLSASWFD 182
Query: 186 RAFSRISSEII 196
+ ++ EI
Sbjct: 183 QVIGPMAKEIA 193
>gi|294139021|ref|YP_003554999.1| hypothetical protein SVI_0250 [Shewanella violacea DSS12]
gi|293325490|dbj|BAJ00221.1| conserved hypothetical protein [Shewanella violacea DSS12]
Length = 189
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 64/183 (34%), Gaps = 6/183 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSED-IIV 75
L + + T + C + + Y L + + Q L+I P+ ++ ++
Sbjct: 5 LVITVLTLMVGCSSTPSELVTYLLPSGNTASAAHHGNDQNLLIVAPVDVASYLADMGLVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIR 133
+ SP EI S W++ L + + ++ + G T + ++ I
Sbjct: 65 QVSPTEIVEARQSLWAEGLSKQLTRRITNDLRQKQTGFWPTQLTSTLSTAGIPRLQIRIN 124
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F A + +I+A L F L D +++L+ +++
Sbjct: 125 RFNGVYTG-VAEVAGEWMLIDAK-GELQTVHPFIFSVPLAADGFAAQVEALSLGVDELTT 182
Query: 194 EII 196
++
Sbjct: 183 QVA 185
>gi|153833341|ref|ZP_01986008.1| putative lipoprotein [Vibrio harveyi HY01]
gi|148870350|gb|EDL69276.1| putative lipoprotein [Vibrio harveyi HY01]
Length = 189
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 71/184 (38%), Gaps = 8/184 (4%)
Query: 20 VLLCTSLSSCFFHNNPV-NIYDLTESTKY---DESVQRHIQLIITEPITEKILNSEDIIV 75
+L+ L+ C +Y L E++ D ++ + QL++ L I+
Sbjct: 6 LLISALLAGCSSAPEDSGALYVLPEASSAKVSDTAIAQRPQLVVRPVELASYLADSGIVY 65
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY--ADYQIISAIR 133
R+S +I +QW+ + I ++I + V+ N + + +++ ++
Sbjct: 66 RTSETKIVQAKHNQWAHNISEQITQRIIDELRSKQSQYWPVEVNNLLDQSGESKLLLSLS 125
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F + + A I I++ + + + L+ D + +L+ + ++
Sbjct: 126 KFNGSYQGN-AEIEGEWLIVDE-NGKVKNSAPVKINMPLQDDGYDALVDALSVGLNNLTD 183
Query: 194 EIID 197
+I
Sbjct: 184 QIAA 187
>gi|157165007|ref|YP_001466751.1| hypothetical protein CCC13826_0089 [Campylobacter concisus 13826]
gi|112799983|gb|EAT97327.1| putative lipoprotein [Campylobacter concisus 13826]
Length = 186
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 77/185 (41%), Gaps = 12/185 (6%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLI---ITEPITEKILNSEDII 74
LA S +Y++ S K + + +L I ++++ I+
Sbjct: 7 LAAAFLFFGCSLKTDVPQATMYEIHYSNKECSAENKQKELKNVFIENVSALDMVDTRKIL 66
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+ + +I+YL +++ + M+ L+ +N + PN D ++ +I S
Sbjct: 67 IVAENNKIRYLSDAKFVSEPSEMVYKSLVKGLYSNCAAKPIFSPNAK---DLRLKVSIIS 123
Query: 135 FEINIDRHCAIITMSLKIINAHD---NSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
+I D+ A ++++ ++ NA+ + ++ +++F + ++ N A +
Sbjct: 124 LQIRGDK--AEVSLAYELFNANTSLKSGMITKEIF-CPDPSSSTIFETINKAANSAIDTL 180
Query: 192 SSEII 196
SEII
Sbjct: 181 ISEII 185
>gi|269966525|ref|ZP_06180608.1| hypothetical protein VMC_20380 [Vibrio alginolyticus 40B]
gi|269828869|gb|EEZ83120.1| hypothetical protein VMC_20380 [Vibrio alginolyticus 40B]
Length = 192
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 70/186 (37%), Gaps = 10/186 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPV-NIYDLTESTKYDESVQRHIQ--LIITEPITEKI-LNSEDI 73
L++ L L+ C +Y L + S Q ++ P+T LN I
Sbjct: 7 LSIALFVGLTGCSSAPQTKGAMYLLPKVEPVTLSSSDIAQRPTLVVRPVTLASYLNDSGI 66
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY--ADYQIISA 131
+ R+S ++ +QW+ + I +++A + + N + ++ ++
Sbjct: 67 VYRTSETQVIQAKHNQWAHSISEQITQRVVAELRHKQSHYWPAEMNNLLDQSSEAKLQLT 126
Query: 132 IRSFEINIDRHCAIITMSLK-IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSR 190
+ F + + I + + ++ + + + + L+ + + +L+
Sbjct: 127 LNKFNGSYKGN---IEIEGEWLLINAEGKVENSAPIQISKPLQDEGYEALVNALSIGLES 183
Query: 191 ISSEII 196
++S+I
Sbjct: 184 LTSDIA 189
>gi|239501393|ref|ZP_04660703.1| putative signal peptide [Acinetobacter baumannii AB900]
Length = 235
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 80/199 (40%), Gaps = 25/199 (12%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK-ILNSEDIIV 75
S +L ++++C P N Y LT K +Q+I P+ L+ +++
Sbjct: 21 SGVLLTAIAMTACSSSPTP-NYYTLTP--KVTPVSNSTVQVIEVLPVGIPDRLDRAPLVL 77
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----YQIISA 131
++S + L +W+ L ++ L A + K+ + + G+ + Y++ +
Sbjct: 78 QNSNGKSTVLDNERWTSTLGTQLRDTLSAGLQQ--KLGAIDSYSSGLSGNNQPLYRVSTD 135
Query: 132 IRSFEINIDRHCAI-ITMSLK------IINAHDNSLVGQK------VFHVEEKLEKD--N 176
F+I + + + ++ +K + + + ++ + ++ +++
Sbjct: 136 FSHFDIVDNSNINVAVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKK 195
Query: 177 KLHFIQSLNRAFSRISSEI 195
+ + N A S+I + I
Sbjct: 196 MEAIVSASNEAMSQIINTI 214
>gi|254673092|emb|CBA07792.1| putative lipoprotein [Neisseria meningitidis alpha275]
Length = 172
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGSETAVKVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADY 126
+ ++ P I W+D L M++ L F + +I +
Sbjct: 57 -----VYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTE--- 108
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 109 KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALEQ 161
Query: 187 AFSRISSEIID 197
+ + ++++
Sbjct: 162 GLKQAAQQMVE 172
>gi|171058397|ref|YP_001790746.1| hypothetical protein Lcho_1714 [Leptothrix cholodnii SP-6]
gi|170775842|gb|ACB33981.1| protein of unknown function DUF330 [Leptothrix cholodnii SP-6]
Length = 232
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/205 (11%), Positives = 64/205 (31%), Gaps = 19/205 (9%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTK----------------YDESVQRH 54
+++ ++ ++ C + + + L + +V
Sbjct: 24 RRLAGRIALLVFGLVVAGCAGTSPVLQQWRLPNAVPGVAASLATPAAAATVSAPTAVPAV 83
Query: 55 IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST 114
QL+ L+ + ++V +Q L G +W++ L + L+ + +
Sbjct: 84 WQLMSPL-QLPDYLDRDALLVPRGQAGLQPLPGHRWAEPLRESVPRLLLQDLGVLRGEAA 142
Query: 115 VVKP--NQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKL 172
V + G+ Q+ +R FE DR + + + + + +
Sbjct: 143 VWRAPLPAGVRIARQLRVELRVFEATADRSAVTLQARWSLADPAGGTAPQVLSTGLRVPV 202
Query: 173 EKDNKLHFIQSLNRAFSRISSEIID 197
+ + + A +++ I
Sbjct: 203 AAGDADALVAAHRIALWQLAERIAA 227
>gi|121635313|ref|YP_975558.1| putative lipoprotein [Neisseria meningitidis FAM18]
gi|120867019|emb|CAM10782.1| putative lipoprotein [Neisseria meningitidis FAM18]
gi|325132832|gb|EGC55512.1| putative lipoprotein [Neisseria meningitidis M6190]
gi|325138734|gb|EGC61286.1| putative lipoprotein [Neisseria meningitidis ES14902]
Length = 172
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 73/191 (38%), Gaps = 21/191 (10%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L++ C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALSLAACGTVQSTQYFVLPDSRYI----RPATQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADY 126
+ ++ P + W+D L M++ L F + +I +
Sbjct: 57 -----VYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFIPASRSGSTE--- 108
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 109 KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALEQ 161
Query: 187 AFSRISSEIID 197
+ + ++++
Sbjct: 162 GLKQAAQQMVE 172
>gi|218768692|ref|YP_002343204.1| putative lipoprotein [Neisseria meningitidis Z2491]
gi|121052700|emb|CAM09043.1| putative lipoprotein [Neisseria meningitidis Z2491]
gi|254671636|emb|CBA09349.1| putative lipoprotein [Neisseria meningitidis alpha153]
gi|316984818|gb|EFV63775.1| conserved hypothetical protein [Neisseria meningitidis H44/76]
gi|319410924|emb|CBY91319.1| conserved hypothetical lipoprotein [Neisseria meningitidis WUE
2594]
gi|325199734|gb|ADY95189.1| putative lipoprotein [Neisseria meningitidis H44/76]
gi|325205611|gb|ADZ01064.1| putative lipoprotein [Neisseria meningitidis M04-240196]
Length = 172
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADY 126
+ ++ P + W+D L M++ L F + +I +
Sbjct: 57 -----VYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTE--- 108
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 109 KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALEQ 161
Query: 187 AFSRISSEIID 197
+ + ++++
Sbjct: 162 GLKQAAQQMVE 172
>gi|299533750|ref|ZP_07047122.1| putative lipoprotein [Comamonas testosteroni S44]
gi|298718299|gb|EFI59284.1| putative lipoprotein [Comamonas testosteroni S44]
Length = 227
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/211 (17%), Positives = 73/211 (34%), Gaps = 28/211 (13%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
+++ S VL + S YDL + + + P+ + +
Sbjct: 15 RLLGASSLVLALAACSGLPTAPTQPVRYDLGMADLAVPAANAAAPSVAPVPLVLAEVQAP 74
Query: 72 -----------DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+ S +++ ++WS +M++ +L G V+
Sbjct: 75 GLPEGLTAMFYRLNYSDS-QQLRAYQNARWSLPPAQMVEQRLRMRL---GLERPVLSGKD 130
Query: 121 G---IYAD----YQIISAIRSFEI---NIDRHCAIITMSLKII---NAHDNSLVGQKVFH 167
+ AD Q+ + F N A++ +S +I + N L+GQKVF
Sbjct: 131 NVRPLQADKRSIAQLRVTVDEFSQVFDNASNSRALLRLSASLIGAGESAGNQLLGQKVFT 190
Query: 168 VEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
VE + Q++ RA ++++ W
Sbjct: 191 VEVPAASADAAGGAQAMARAVDEAAAQLSRW 221
>gi|15677521|ref|NP_274677.1| hypothetical protein NMB1672 [Neisseria meningitidis MC58]
gi|161870519|ref|YP_001599691.1| lipoprotein [Neisseria meningitidis 053442]
gi|7226925|gb|AAF42021.1| conserved hypothetical protein [Neisseria meningitidis MC58]
gi|161596072|gb|ABX73732.1| lipoprotein [Neisseria meningitidis 053442]
gi|325134794|gb|EGC57431.1| putative lipoprotein [Neisseria meningitidis M13399]
gi|325140865|gb|EGC63375.1| putative lipoprotein [Neisseria meningitidis CU385]
Length = 172
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 73/191 (38%), Gaps = 21/191 (10%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L++ C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALSLAACGTVQSTQYFVLPDSRYI----RPATQGGETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADY 126
+ ++ P + W+D L M++ L F + +I +
Sbjct: 57 -----VYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTE--- 108
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 109 KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALEQ 161
Query: 187 AFSRISSEIID 197
+ + ++++
Sbjct: 162 GLKQAAQQMVE 172
>gi|261399931|ref|ZP_05986056.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970]
gi|269210380|gb|EEZ76835.1| conserved hypothetical protein [Neisseria lactamica ATCC 23970]
Length = 172
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 26/191 (13%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGSETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADY 126
+ ++ P I W+D L M++ L F + +I +
Sbjct: 57 -----VYQTDPYRINTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTE--- 108
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 109 KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALEQ 161
Query: 187 AFSRISSEIID 197
+ + ++++
Sbjct: 162 GLKQAAQQMVE 172
>gi|289673098|ref|ZP_06493988.1| hypothetical protein PsyrpsF_07614 [Pseudomonas syringae pv.
syringae FF5]
Length = 207
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/198 (15%), Positives = 60/198 (30%), Gaps = 16/198 (8%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKY---DESVQRHIQLIITEPITEKILNSEDI 73
+ + L +C + + Y L Q + I ++ +
Sbjct: 7 LMVLAAAVGLGAC--TSTQTHYYTLIAPMSANSTAAGKPMPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P I + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLEHRFGSRDMAGLPKNSDQPTLSIRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGNYALIDVVWTLGLRDAGATAGSKRRSLTCSSVIREQAGEGMENLIIAHQKA 183
Query: 188 FSRISSEII----DWTLS 201
+R++ +I +WT
Sbjct: 184 VARLADKIAATATNWTAQ 201
>gi|296313492|ref|ZP_06863433.1| hypothetical protein NEIPOLOT_00280 [Neisseria polysaccharea ATCC
43768]
gi|296840013|gb|EFH23951.1| hypothetical protein NEIPOLOT_00280 [Neisseria polysaccharea ATCC
43768]
Length = 172
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/192 (13%), Positives = 71/192 (36%), Gaps = 23/192 (11%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGSETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF---ENNGKISTVVKPNQGIYAD 125
+ ++ P + W+D L M++ L F +N +
Sbjct: 57 -----VYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDNTRIFVPASRSGSTE--- 108
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
+ I +F+ + +I+ + + + + FH+E + + D +L
Sbjct: 109 -KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALE 160
Query: 186 RAFSRISSEIID 197
+ + + ++++
Sbjct: 161 QGLKQAAQQMVE 172
>gi|113866708|ref|YP_725197.1| hypothetical protein H16_A0681 [Ralstonia eutropha H16]
gi|113525484|emb|CAJ91829.1| conserved hypothetical protein [Ralstonia eutropha H16]
Length = 201
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 58/164 (35%), Gaps = 12/164 (7%)
Query: 43 ESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE-IQYLIGSQWSDKLPRMIQLK 101
+T S L + + LN ++VR ++ L ++WS LP ++
Sbjct: 42 PATTTPASTNTLW-LEVAPVRVPERLNRPQLVVRDGGDAGLRLLDLARWSAPLPDELRDA 100
Query: 102 LIANFENNGKISTVVKPNQG---IYADYQIISAIRSFEINIDRHC-AIITMSLKIINAHD 157
L + + V QG + Y+I + + + ++ + A I +++ D
Sbjct: 101 LSQRLQAT--LGAVDTYQQGMSDVQPLYRITTEVLRLDADVGQRAGATINWTVR--RLPD 156
Query: 158 NSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLS 201
+V + E + + + +++I LS
Sbjct: 157 GKVVSGRT-QAELPAPGA-VDGVVAAYREIVATTAADIAAGVLS 198
>gi|242277492|ref|YP_002989621.1| hypothetical protein Desal_0010 [Desulfovibrio salexigens DSM 2638]
gi|242120386|gb|ACS78082.1| hypothetical protein Desal_0010 [Desulfovibrio salexigens DSM 2638]
Length = 208
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 36/199 (18%), Positives = 69/199 (34%), Gaps = 12/199 (6%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE 65
+K I+ L+ C S V+ Y + ++ D +L + +
Sbjct: 3 SKFFFIAILIFVLSCAGCIGGKSVESSFLRVDGY--SSVSECDRVNPDMPRLALKRFSSL 60
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWS-DKLPRMIQLKLIA-NFE--NNGKISTVVKPNQG 121
L+ E +IV + +WS + P I + N+ ++ + +P G
Sbjct: 61 PALDRETVIVAKGQVMKPDY---RWSWEGTPAEIFDLVAGPALNCMNSYEVISPYRP--G 115
Query: 122 IYADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
I D + I SFEI A + + + + L+ +K+ E ++
Sbjct: 116 IEKDLVLSGVITSFEIQRSGGDAFKVAVRYSLWDGSGKELLARKLVEAEAPVKSMRGESI 175
Query: 181 IQSLNRAFSRISSEIIDWT 199
Q+ +A I I W
Sbjct: 176 AQAAQKAVDGIMKNTIFWI 194
>gi|283853767|ref|ZP_06370992.1| protein of unknown function DUF330 [Desulfovibrio sp. FW1012B]
gi|283570829|gb|EFC18864.1| protein of unknown function DUF330 [Desulfovibrio sp. FW1012B]
Length = 199
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 60/177 (33%), Gaps = 7/177 (3%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESVQRH--IQLIITEPITEKILNSEDIIVRSSPIEI 82
L+ C + P + Y L+ + L I L+ I+ R ++
Sbjct: 21 LLAGCG-KSAPTHFYSLSAPPPKTAEAPAGPCLSLGIGPVDFPAYLDRSQIVTRLGQNQM 79
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKP--NQGIYADYQIISAIRSFEINID 140
QW + L Q L N +V G + D Q++ + SF+ ++
Sbjct: 80 HLADFEQWIEPLRENFQRALTDNLAALVCAKPLVTYPWPAGGHPDRQVVIQVASFDGSL- 138
Query: 141 RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
A + S +++A D + + E + + +R + + ++ +
Sbjct: 139 GQEAWLKASWSVLDA-DGKSLTWRTAEYREAAAGPDYAALAAAQSRLVEKFAKDVAE 194
>gi|330950549|gb|EGH50809.1| hypothetical protein PSYCIT7_03933 [Pseudomonas syringae Cit 7]
Length = 207
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 31/198 (15%), Positives = 61/198 (30%), Gaps = 16/198 (8%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + L +C + + Y L T S Q + I ++ +
Sbjct: 7 LVVLAAALGLGAC--TSTQTHYYTLIAPMGATSAATSKPMPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P I + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERRFGSRDMAGLPKNSDQPTLSIRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MLGNYALIDVVWTLGLRDAGATAGSKRQSLTCSSVIREQAGEGMENLIIAHQKA 183
Query: 188 FSRISSEI----IDWTLS 201
++++ +I WT
Sbjct: 184 VAQLADKIATTAARWTAQ 201
>gi|255603661|ref|XP_002538094.1| conserved hypothetical protein [Ricinus communis]
gi|223513857|gb|EEF24290.1| conserved hypothetical protein [Ricinus communis]
Length = 182
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 64/165 (38%), Gaps = 9/165 (5%)
Query: 39 YDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
Y L+ + ++ ++I ++++ I+V + ++ S+W++ L
Sbjct: 14 YVLSANIDTQQAKNPTATYGIVIGTVTIPEVVDRPQIVVLKADSQVSVAEQSRWAEPLNS 73
Query: 97 MIQLKLIANFENNGKISTVVKPNQG--IYADYQIISAIRSFEINIDRHCAIITMSLKIIN 154
I + N + + V Q + +DY+++ ++ F+ + + L I++
Sbjct: 74 NISRVVADNLAHLLPGAQVSSVAQSRTVASDYRVMVEVQHFDSIVGEG--VRDEFLWIVH 131
Query: 155 A--HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
D + V E E + + +RA + +S +I
Sbjct: 132 TPNSDGVEKRGRTV-VRETAEGGEYAALVAAHSRALTTLSRDIAT 175
>gi|292487864|ref|YP_003530739.1| lipoprotein YmbA [Erwinia amylovora CFBP1430]
gi|292899090|ref|YP_003538459.1| lipoprotein [Erwinia amylovora ATCC 49946]
gi|291198938|emb|CBJ46048.1| putative lipoprotein [Erwinia amylovora ATCC 49946]
gi|291553286|emb|CBA20331.1| Uncharacterized lipoprotein ymbA precursor [Erwinia amylovora
CFBP1430]
Length = 186
Score = 48.8 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 65/173 (37%), Gaps = 8/173 (4%)
Query: 27 SSCFFHNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
S+C V Y L + S L + L ++ +S+ ++
Sbjct: 14 SACSETPKTVY-YQLPMAATRAAVSSPSVTQPLWVERVTVPDYLAGNGVVYQSNDVQYVI 72
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA 144
+QW+ L + +Q LI N ++ Q + ++ F D H A
Sbjct: 73 AANNQWASPLDQQLQQTLIGNLSAA-LPGALISSAQPGQQHDTLTVSVHDFHGRYDGH-A 130
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
++ + I H+ L ++ F++ ++D +++L + R++ ++ +
Sbjct: 131 VVR--GEWILEHNGKLF-KQPFNMTLPQKEDGYDDLVRTLAAGWQRVAVQVAN 180
>gi|325266671|ref|ZP_08133348.1| lipoprotein [Kingella denitrificans ATCC 33394]
gi|324982114|gb|EGC17749.1| lipoprotein [Kingella denitrificans ATCC 33394]
Length = 178
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 60/169 (35%), Gaps = 19/169 (11%)
Query: 32 HNNPVNIYDLTESTKYDESVQR-----HIQLIITEPITEKILNSEDIIVRSSPIEIQYLI 86
+ P Y L +S + + ++ +++ EP LN + ++ +S +Q
Sbjct: 23 SSTPTVYYQLPDSAFVSANTPKQTVWTNVYVVLAEP-----LNRQSLLYQSDEHTVQMTQ 77
Query: 87 GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAII 146
+ W+ L + + + +P +G I I F+ + I
Sbjct: 78 HNLWAAPLSNGLAAAVANKLNRQSSLHF--RPAEGAAKSPAITLFIDRFQGSYLGQT-EI 134
Query: 147 TMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
++ + S+ FH + D ++SLN+ ++ ++
Sbjct: 135 RGYARL---PNGSIRA---FHAVTPQKGDGYAAMLESLNQGLDDVARQL 177
>gi|313667950|ref|YP_004048234.1| lipoprotein [Neisseria lactamica ST-640]
gi|313005412|emb|CBN86846.1| putative lipoprotein [Neisseria lactamica 020-06]
Length = 172
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 72/191 (37%), Gaps = 21/191 (10%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C ++ S + P + Y + + +++ + EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTVQSTQYFVLPDSRYI----RPATQGSETAVEVRLAEPLKRGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADY 126
+ ++ P + W+D L M++ L F + +I +
Sbjct: 57 -----VYQTDPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTE--- 108
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ I +F+ + +I+ + + + + FH+E + + D +L +
Sbjct: 109 KWTVYIDAFQGSYTGKT-LISGYAVLPDGTN------RPFHIETEQQGDGYAAMTAALEQ 161
Query: 187 AFSRISSEIID 197
+ + ++++
Sbjct: 162 GLKQAAQQMVE 172
>gi|264676425|ref|YP_003276331.1| lipoprotein [Comamonas testosteroni CNB-2]
gi|262206937|gb|ACY31035.1| putative lipoprotein [Comamonas testosteroni CNB-2]
Length = 227
Score = 48.4 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/211 (16%), Positives = 73/211 (34%), Gaps = 28/211 (13%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
+++ S VL + S YDL + + + P+ + +
Sbjct: 15 RLLGASSLVLALAACSGLPTAPTQPVRYDLGMADLAVPAANAAAPSVAPVPLVLAEVQAP 74
Query: 72 -----------DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+ S +++ ++WS +M++ ++ G V+
Sbjct: 75 GLPEGLTAMFYRLNYSDS-QQLRAYQNARWSLPPAQMVEQRMRMRL---GLERPVLSGKD 130
Query: 121 G---IYAD----YQIISAIRSFEI---NIDRHCAIITMSLKII---NAHDNSLVGQKVFH 167
+ AD Q+ + F N A++ +S +I + N L+GQKVF
Sbjct: 131 NVRPLQADKRSIAQLRVTVDEFSQVFDNASNSRALLRLSASLIGAGESAGNQLLGQKVFT 190
Query: 168 VEEKLEKDNKLHFIQSLNRAFSRISSEIIDW 198
VE + Q++ RA ++++ W
Sbjct: 191 VEVPAASADAAGGAQAMARAVDEAAAQLSRW 221
>gi|294838770|ref|ZP_06783453.1| putative signal peptide [Acinetobacter sp. 6013113]
gi|294857249|ref|ZP_06795018.1| putative signal peptide [Acinetobacter sp. 6013150]
gi|301344823|ref|ZP_07225564.1| putative signal peptide [Acinetobacter baumannii AB056]
gi|301510474|ref|ZP_07235711.1| putative signal peptide [Acinetobacter baumannii AB058]
gi|301596619|ref|ZP_07241627.1| putative signal peptide [Acinetobacter baumannii AB059]
Length = 235
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 79/199 (39%), Gaps = 25/199 (12%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK-ILNSEDIIV 75
S +L ++++C P N Y LT K +Q+I P+ L+ +++
Sbjct: 21 SGVLLTAIAMTACSSSPTP-NYYTLTP--KVTPVSNSTVQVIEVLPVGIPDRLDRAPLVL 77
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----YQIISA 131
+ S + L +W+ L ++ L A + K+ + + G+ + Y++ +
Sbjct: 78 QDSNGKSTVLDNERWTSTLGTQLRDTLSAGLQQ--KLGAIDSYSSGLSGNNQPLYRVSTD 135
Query: 132 IRSFEINIDRHCAI-ITMSLK------IINAHDNSLVGQK------VFHVEEKLEKD--N 176
F+I + + + ++ +K + + + ++ + ++ +++
Sbjct: 136 FSHFDIVDNSNINVAVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKK 195
Query: 177 KLHFIQSLNRAFSRISSEI 195
+ + N A S+I + +
Sbjct: 196 MEAIVGASNEAMSQIINTV 214
>gi|169795460|ref|YP_001713253.1| putative signal peptide [Acinetobacter baumannii AYE]
gi|169148387|emb|CAM86252.1| conserved hypothetical protein; putative signal peptide
[Acinetobacter baumannii AYE]
Length = 252
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 29/199 (14%), Positives = 79/199 (39%), Gaps = 25/199 (12%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK-ILNSEDIIV 75
S +L ++++C P N Y LT K +Q+I P+ L+ +++
Sbjct: 38 SGVLLTAIAMTACSSSPTP-NYYTLTP--KVTPVSNSTVQVIEVLPVGIPDRLDRAPLVL 94
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----YQIISA 131
+ S + L +W+ L ++ L A + K+ + + G+ + Y++ +
Sbjct: 95 QDSNGKSTVLDNERWTSTLGTQLRDTLSAGLQQ--KLGAIDSYSSGLSGNNQPLYRVSTD 152
Query: 132 IRSFEINIDRHCAI-ITMSLK------IINAHDNSLVGQK------VFHVEEKLEKD--N 176
F+I + + + ++ +K + + + ++ + ++ +++
Sbjct: 153 FSHFDIVDNSNINVAVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKK 212
Query: 177 KLHFIQSLNRAFSRISSEI 195
+ + N A S+I + +
Sbjct: 213 MEAIVGASNEAMSQIINTV 231
>gi|237801280|ref|ZP_04589741.1| hypothetical protein POR16_20821 [Pseudomonas syringae pv. oryzae
str. 1_6]
gi|331024139|gb|EGI04196.1| hypothetical protein POR16_20821 [Pseudomonas syringae pv. oryzae
str. 1_6]
Length = 207
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/199 (15%), Positives = 64/199 (32%), Gaps = 16/199 (8%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDIIV 75
+ + L +C + + Y L T+ + Q + + ++ ++V
Sbjct: 9 VLAMTLGLVAC--TSTQTHYYTLIAPMGQTEASAARPMPFQFEMLPVLMAVQVDQPPLVV 66
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAIRS 134
R + L +W+ L L E G P I + +R
Sbjct: 67 RQGNGSLAILDTERWASPLGDEFHDALTPQLERRFGSRDMAGLPKSADQPVLSIRTDVRR 126
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRAFS 189
FE + + A+I + + ++ G K V + + I + +A S
Sbjct: 127 FES-MPGNYALIDVVWTLGLREGGAIAGSKRKSLTCSSVIREQAGAGMENLIVAHQKAVS 185
Query: 190 RISSEIID----WTLSSLP 204
+++ +I WT S
Sbjct: 186 KLADKIAATAQSWTQQSSS 204
>gi|260554521|ref|ZP_05826742.1| lipoprotein [Acinetobacter baumannii ATCC 19606]
gi|260411063|gb|EEX04360.1| lipoprotein [Acinetobacter baumannii ATCC 19606]
Length = 243
Score = 48.4 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 79/199 (39%), Gaps = 25/199 (12%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK-ILNSEDIIV 75
S +L ++++C P N Y LT K +Q+I P+ L+ +++
Sbjct: 29 SGVLLTAIAMTACSSSPTP-NYYTLTP--KVTPVSNSTVQVIEVLPVGIPDRLDRAPLVL 85
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----YQIISA 131
+ S + L +W+ L ++ L A + K+ + + G+ + Y++ +
Sbjct: 86 QDSNGKSTVLDNERWTSTLGTQLRDTLSAGLQQ--KLGAIDSYSSGLSGNNQPLYRVSTD 143
Query: 132 IRSFEINIDRHCAI-ITMSLK------IINAHDNSLVGQK------VFHVEEKLEKD--N 176
F+I + + + ++ +K + + + ++ + ++ +++
Sbjct: 144 FSHFDIVDNSNINVAVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKK 203
Query: 177 KLHFIQSLNRAFSRISSEI 195
+ + N A S+I + I
Sbjct: 204 MEAIVGASNEAMSQIINTI 222
>gi|326622751|gb|EGE29096.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Dublin str. 3246]
Length = 179
Score = 48.0 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 72/176 (40%), Gaps = 11/176 (6%)
Query: 26 LSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+SC + Y L + + Q + L + + L ++ ++S ++
Sbjct: 5 LASCSSGGENKSYYQLPIAQSGVQSTASQGNRLLWVEQVSVPDYLAGNGVVYQASDVQYV 64
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAIRSFEINIDR 141
+ W+ L + ++ L+AN + ++ V G D + + F D
Sbjct: 65 IANNNLWASPLDQQLRNTLVANL--SARLPGWVVASQPLGTTQD-TLNVTVTGFHGRYDG 121
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
+ +S + + H+ L+ ++ FH+E +KD ++ L A+S+ ++ I D
Sbjct: 122 K---VIVSGEWLLNHNGQLI-KRPFHIEASQQKDGYDEMVKVLASAWSQEAAAIAD 173
>gi|54302838|ref|YP_132831.1| hypothetical protein PBPRB1159 [Photobacterium profundum SS9]
gi|46916262|emb|CAG23031.1| conserved hypothetical protein [Photobacterium profundum SS9]
Length = 197
Score = 48.0 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 72/185 (38%), Gaps = 6/185 (3%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ-LIITEP-ITEKILNSEDI 73
V L+ C + VN Y L + S Q L++ P + L +
Sbjct: 5 LLFMVAAAAFLAGCSSQPDAVNSYLLPTGVQSTTSQIGSNQPLLVIRPVEMAEHLAGTGL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISA 131
+ + S E+ + W++ + + + ++ + + + +T + P Y ++
Sbjct: 65 VYQVSDTEVVQAQQNLWAESIGKQLTRRINQDLRSKQSQFWTTELTPALSTYNSPRLQVK 124
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
I F + A I+ ++ D L G F + L+++ +++L+ +R+
Sbjct: 125 IDEFNGHYSG-MAKISGEWMLVK-SDGDLNGVYPFQFQVPLQEEGYDAQVKALSEGINRL 182
Query: 192 SSEII 196
+++I
Sbjct: 183 TTQIA 187
>gi|238894008|ref|YP_002918742.1| hypothetical protein KP1_1953 [Klebsiella pneumoniae NTUH-K2044]
gi|330010374|ref|ZP_08306734.1| hypothetical protein HMPREF9538_04433 [Klebsiella sp. MS 92-3]
gi|238546324|dbj|BAH62675.1| hypothetical protein KP1_1953 [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328534566|gb|EGF61148.1| hypothetical protein HMPREF9538_04433 [Klebsiella sp. MS 92-3]
Length = 187
Score = 48.0 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 71/184 (38%), Gaps = 8/184 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDI 73
LA +C L++C Y L +S L + + L +
Sbjct: 4 WLLAAAVCV-LTACSSGGESKTYYQLPVVQGGAQSAASQGARLLWVEQVSIPDYLAGNGV 62
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ +++ ++ + W+ L + ++ L+AN V G D + A+
Sbjct: 63 VYQTTDVQYVIANNNLWASPLDQQLRTTLVANLSQQLPGWVVSSQPLGSEQD-TLNVAVN 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H L+ ++ F++ + E+D +++L +A+S+ ++
Sbjct: 122 GFHGRYDG---RVIVSGEWLLKHQGQLI-KRPFNIVLRQEQDGYDAMVKTLAQAWSQEAA 177
Query: 194 EIID 197
I
Sbjct: 178 AIAS 181
>gi|262039992|ref|ZP_06013257.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|259042660|gb|EEW43666.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 187
Score = 48.0 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 71/184 (38%), Gaps = 8/184 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDI 73
LA +C L++C Y L +S L + + L +
Sbjct: 4 WLLAAAVCV-LTACSSGGESKTYYQLPVVQGGAQSAASQGARLLWVEQVSIPDYLAGNGV 62
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ +++ ++ + W+ L + ++ L+AN V G D + A+
Sbjct: 63 VYQTTDVQYVIANNNLWASPLDQQLRTTLVANLSQQLPGWVVSSQPLGSEQD-TLNVAVN 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H L+ ++ F++ + E+D +++L +A+S+ ++
Sbjct: 122 GFHGRYDG---RVIVSGEWLMKHQGQLI-KRPFNIVLRQEQDGYDAMVKTLAQAWSQEAA 177
Query: 194 EIID 197
I
Sbjct: 178 AIAS 181
>gi|261378865|ref|ZP_05983438.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685]
gi|269144679|gb|EEZ71097.1| conserved hypothetical protein [Neisseria cinerea ATCC 14685]
Length = 172
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/183 (13%), Positives = 61/183 (33%), Gaps = 17/183 (9%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVR 76
+AV L + ++D + +++ + EP+ L + +
Sbjct: 5 PIAVALLLAACGTAQSTQYFILHDSRYLPPERRVAETAVKVRLAEPLKRGGL-----VYQ 59
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFE--NNGKISTVVKPNQGIYADYQIISAIRS 134
+ P + W+ L M++ L F N ++ N + I +
Sbjct: 60 TDPYRLHTAQNHVWASSLDDMLEAALSNAFNRLNTKRVFIPASRNGQSE---KWTVYIDT 116
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F+ + + ++ D ++ + FH E + + D SL + + + +
Sbjct: 117 FQGSYTGKTIVGGYAV----FPDGTV---RSFHAETEQQGDGYAAMTASLEQGLQQAARQ 169
Query: 195 IID 197
I+
Sbjct: 170 IVR 172
>gi|83746046|ref|ZP_00943101.1| Hypothetical Protein RRSL_04075 [Ralstonia solanacearum UW551]
gi|207742459|ref|YP_002258851.1| protein of unknown function duf330 [Ralstonia solanacearum IPO1609]
gi|83727229|gb|EAP74352.1| Hypothetical Protein RRSL_04075 [Ralstonia solanacearum UW551]
gi|206593849|emb|CAQ60776.1| protein of unknown function duf330 [Ralstonia solanacearum IPO1609]
Length = 229
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 52/140 (37%), Gaps = 3/140 (2%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+ + + + +C ++ L + E+ + ++ + L
Sbjct: 7 TRASSLRLACVAGAAALMGACASPEPTLHTLSLRAAPPAPEATRIQRAFRLSGVRVPERL 66
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV--KPNQGIYADY 126
+ I++R+S ++Q L +W+ ++ L A+ + V P G+ Y
Sbjct: 67 DKPQIVLRTSDSQVQELEQQRWAAPFSAELRDALSADLADALSAVDVGGATPPAGV-PLY 125
Query: 127 QIISAIRSFEINIDRHCAII 146
+I + ++ F+ + + +
Sbjct: 126 RIGADVQRFDARPGQDVSAL 145
>gi|148264678|ref|YP_001231384.1| hypothetical protein Gura_2634 [Geobacter uraniireducens Rf4]
gi|146398178|gb|ABQ26811.1| protein of unknown function DUF330 [Geobacter uraniireducens Rf4]
Length = 212
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 35/206 (16%), Positives = 74/206 (35%), Gaps = 22/206 (10%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITE-P 62
K + I+ +++C L+ +L P Y L + II+ P
Sbjct: 2 KKYRPIRFLLLACGLSPVLAGCFGGTSP---PSRFYTLAPLETRSSQLPTGRSAIISLGP 58
Query: 63 ITEKI-LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST------- 114
+ L+ I+ RS E+ +W L I L+AN +G++++
Sbjct: 59 VFIPDYLDRRQIVTRSGQNELIIAEFDRWGGSLADEITRSLVANL--SGRLASANISVFS 116
Query: 115 -VVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLK----IINAHDNSLVGQKVFHVE 169
P + Y++ +I F+ + +S + + + K +
Sbjct: 117 WQSMPLSIMGTSYRVPVSISRFD---GIPGDSVVLSARWGVFAKKETTDESLLVKEAAIT 173
Query: 170 EKLEKDNKLHFIQSLNRAFSRISSEI 195
EK++ + + ++ RA R+ E+
Sbjct: 174 EKVDGQSYDAMVAAMQRALDRLGKEM 199
>gi|152969538|ref|YP_001334647.1| hypothetical protein KPN_00981 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|150954387|gb|ABR76417.1| hypothetical protein KPN_00981 [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
Length = 187
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 31/184 (16%), Positives = 71/184 (38%), Gaps = 8/184 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDI 73
LA +C L++C Y L +S L + + L +
Sbjct: 4 WLLAAAVCV-LTACSIGGESKTYYQLPVVQGGAQSAASQGARLLWVEQVSIPDYLAGNGV 62
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ +++ ++ + W+ L + ++ L+AN V G D + A+
Sbjct: 63 VYQTTDVQYVIANNNLWASPLDQQLRTTLVANLSQQLPGWVVSSQPLGSEQD-TLNVAVN 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H L+ ++ F++ + E+D +++L +A+S+ ++
Sbjct: 122 GFHGRYDG---RVIVSGEWLLKHQGQLI-KRPFNIVLRQEQDGYDAMVKTLAQAWSQEAA 177
Query: 194 EIID 197
I
Sbjct: 178 AIAS 181
>gi|154175220|ref|YP_001408231.1| 50S ribosomal protein L5 (BL6) [Campylobacter curvus 525.92]
gi|112802190|gb|EAT99534.1| 50S ribosomal protein L5 (BL6) [Campylobacter curvus 525.92]
Length = 192
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/198 (14%), Positives = 77/198 (38%), Gaps = 11/198 (5%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEP 62
+ + I + + + SL + IY + ++ + + I +
Sbjct: 2 RNMKNITRNFMYFILVTAFAGCSLKTDVPQATMYEIYYANKECAAEKRQEFRKNVYIEKV 61
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
++++ I++ + +I++L +++ MI L+ +N + PN
Sbjct: 62 SALDMVDTRQILIVAENNQIRFLQDAKFVALPSEMIYKALVKGLYSNCAAKPIFSPN--- 118
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEE----KLEKDNKL 178
+ D ++ ++ S +I D+ A I + ++ NA N + + + E K
Sbjct: 119 FDDLRLKISVISLQIRGDK--AEIAFAYELFNA--NKSIKSGMINKELFCPDPSSKTIFD 174
Query: 179 HFIQSLNRAFSRISSEII 196
+++N A + ++I+
Sbjct: 175 TINKAVNLAIDTLLADIV 192
>gi|239907927|ref|YP_002954668.1| hypothetical protein DMR_32910 [Desulfovibrio magneticus RS-1]
gi|239797793|dbj|BAH76782.1| hypothetical protein [Desulfovibrio magneticus RS-1]
Length = 201
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 28/201 (13%), Positives = 72/201 (35%), Gaps = 9/201 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT-ESTKYDESVQRHIQLII 59
M+ + +++ +I + A L L C + P + Y L+ + + S L +
Sbjct: 1 MNPAIRRLV---VILAAGAACLLPLLVGCG-KSAPTHFYSLSGAAPAAEGSGPSGPCLAV 56
Query: 60 T-EPITEKI-LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVK 117
P+ L+ I+ R+ ++ QW + Q L N + +
Sbjct: 57 GIGPVDFPSYLDRSQIVTRTGANQMHLAEFEQWIEAPHDNFQRALTENLSRLVCVKPIYT 116
Query: 118 PNQGIYADYQIISAIRSFEINID-RHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDN 176
+ A + I+ ++ A++ ++ +++A D+ + + E + +
Sbjct: 117 YPWPVGARLERQVVIQVARLDGTLGQEAVLRVNWSVLDA-DHKTLEWRSGDYREPVSGPD 175
Query: 177 KLHFIQSLNRAFSRISSEIID 197
+ +R + + E+
Sbjct: 176 YASLAAAESRLVEKFAKEVAA 196
>gi|283784772|ref|YP_003364637.1| putative lipoprotein [Citrobacter rodentium ICC168]
gi|282948226|emb|CBG87793.1| putative lipoprotein [Citrobacter rodentium ICC168]
Length = 187
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 62/168 (36%), Gaps = 7/168 (4%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIVR 76
V++ L+SC + Y L + + Q L + + L ++ +
Sbjct: 6 VVVMACLLASCSSGGENKSYYQLPVAQSGVQSTANQSSRLLWVEQVSVPDYLAGNGLVYQ 65
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
+S ++ + W+ L + ++ L+A+ V G D + + F
Sbjct: 66 TSDVQYVIASNNLWASPLDQQLRNTLVASLSTQLPGWVVASQPLGSVQD-TLNVTVTGFH 124
Query: 137 INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
D + +S +++ H L+ ++ FH+E +D ++ L
Sbjct: 125 GRYDGK---VIVSGELLLNHQGQLI-KRPFHIEAVQTRDGYDEMVKVL 168
>gi|325271254|ref|ZP_08137798.1| hypothetical protein G1E_00625 [Pseudomonas sp. TJI-51]
gi|324103614|gb|EGC00917.1| hypothetical protein G1E_00625 [Pseudomonas sp. TJI-51]
Length = 236
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 60/164 (36%), Gaps = 5/164 (3%)
Query: 34 NPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDK 93
PV +Y L S + +++ L E + R + + +W+
Sbjct: 25 QPVALYQLDSGDPGQPSQSAGMAVVLGPVSVADYLQRETFLQRQADGSLSAATDGRWAGS 84
Query: 94 LPRMIQLKLIANFE-NNGKISTVVKPNQ-GIYADYQIISAIRSFEINIDRHCAIITMSLK 151
L I L+ V+ P G D Q++ +I + D+ AI+ +
Sbjct: 85 LSSDIDQLLVRQLAWRLDSQRVVLAPATAGFTPDVQVLLSITRLDSGKDQP-AILDAQWR 143
Query: 152 IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+++ + ++ H+E+ E +Q+ + +++ ++
Sbjct: 144 LLDRR-GRVRDNRIVHLEQPHEGSE-SSQVQAQGQLLQKLAEQL 185
>gi|317047594|ref|YP_004115242.1| hypothetical protein Pat9b_1365 [Pantoea sp. At-9b]
gi|316949211|gb|ADU68686.1| protein of unknown function DUF330 [Pantoea sp. At-9b]
Length = 188
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 64/185 (34%), Gaps = 10/185 (5%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQ---LIITEPITEKILNSED 72
L + L+ C Y L + S + Q L + + L
Sbjct: 4 GLMIGALLLLAGCSSTVE-TTYYQLPAGAAVAPVSSEASSQQPMLWVQQISVPDYLAGNG 62
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
++ ++S ++ + W+ L + +Q L+ N V G D + +
Sbjct: 63 LVYQTSDVKYVIAANNLWASPLDQQLQQTLVNNLSRALPGRLVSGSPLGDTHD-TLSVNV 121
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F+ D + S + + H+ L+ F++ +D +++L + +++
Sbjct: 122 TGFQGRFDGKAVV---SGEWVLQHEGRLIKHG-FNLTLPQTEDGYDALVRTLALGWQQVA 177
Query: 193 SEIID 197
+I +
Sbjct: 178 QQIAN 182
>gi|223936764|ref|ZP_03628674.1| hypothetical protein Cflav_PD3783 [bacterium Ellin514]
gi|223894615|gb|EEF61066.1| hypothetical protein Cflav_PD3783 [bacterium Ellin514]
Length = 136
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/138 (18%), Positives = 55/138 (39%), Gaps = 23/138 (16%)
Query: 72 DII---VRSSPIEIQYLIGSQWSDK----LPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
I+ VR +I YL W++ + R ++ L G + V + + +
Sbjct: 3 RILGFPVRKGENQIDYLQYYNWAEPIHAGIERTMRENLSEEL---GIL--VGRNSVARSS 57
Query: 125 D---YQIISAIRSFEINIDRHCAIITMSLKIINA---HDNSLVGQKVFHVEEKLEKDNKL 178
D +++ I FE+ D++ AI++ I++ + +K F K +
Sbjct: 58 DENNFEVRINISRFEL-TDKNQAIVSGDWMILHGNGVRKGRVELRKNF----PGSKTDAG 112
Query: 179 HFIQSLNRAFSRISSEII 196
+ +L+ A S + +I
Sbjct: 113 PGVAALSGALSELCQQIA 130
>gi|194288781|ref|YP_002004688.1| lipoprotein [Cupriavidus taiwanensis LMG 19424]
gi|193222616|emb|CAQ68619.1| putative lipoprotein [Cupriavidus taiwanensis LMG 19424]
Length = 206
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 30/207 (14%), Positives = 67/207 (32%), Gaps = 25/207 (12%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ-------LIIT 60
++K+ ++ + A L+ C Y L + + L +
Sbjct: 1 MMKRLSLTLACASFAAAVLAGCASPE--PRYYTLAQGPAPVAAPAPAAAPSTDTLWLEVA 58
Query: 61 EPITEKILNSEDIIVRSSPIE------IQYLIGSQWSDKLPRMIQLKLIANFENNGKIST 114
+ LN ++VR ++ L S+WS LP ++ L + +
Sbjct: 59 PVRVPERLNRPQLVVRDGQNGSGGDAGVRLLDLSRWSAPLPDELRDALSQRLQAT--LGA 116
Query: 115 VVKPNQGI---YADYQIISAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEE 170
V QG+ Y+I + + + + + A I +++ D +V + E
Sbjct: 117 VDTYQQGLSDVQPLYRITTEVLRLDAEVGQRAGATINWTVR--RLPDGKVVSGRT-QAEL 173
Query: 171 KLEKDNKLHFIQSLNRAFSRISSEIID 197
+ + + +S+I
Sbjct: 174 PAPGA-VDGVVAAYREIVASTASDIAA 199
>gi|330971509|gb|EGH71575.1| Glyoxalase/bleomycin resistance protein/dioxygenase [Pseudomonas
syringae pv. aceris str. M302273PT]
Length = 380
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 60/179 (33%), Gaps = 13/179 (7%)
Query: 8 IIKKKII-SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDE-SVQRHIQLIITEPITE 65
+ ++ +I LA L + L S F P +++ ST + + R L + P
Sbjct: 1 MKRRTLIKGAVLAAALPSILPSLSFAAGPALTTEVSASTIVNAVAATRDGTLFVGMPRWN 60
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLP------RMIQLKLIANFENNGKISTVVKPN 119
+ + P ++ G W++ P +Q+ + F+++
Sbjct: 61 ITKQTPSLARVDGPSKLTPFPGGAWNEWAPGKDVANAFVQVNSVHVFDDDTVWIVDQGAP 120
Query: 120 QGIYADYQIISAIRSFEINIDRHCAIITMSLKIIN----AHDNSLVGQKVFHVEEKLEK 174
+ + + + F+ + ++ I+ +D + V+ + +
Sbjct: 121 DNLTT-LRGAAKVAQFDSKTGKVLRVLRFDATILPHGAVMNDLRIFANHVYITDAGVGG 178
>gi|58039756|ref|YP_191720.1| hypothetical protein GOX1304 [Gluconobacter oxydans 621H]
gi|58002170|gb|AAW61064.1| Hypothetical protein GOX1304 [Gluconobacter oxydans 621H]
Length = 205
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 32/195 (16%), Positives = 71/195 (36%), Gaps = 7/195 (3%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE 65
+ + + +S A+ L LS+C +Y L ++ + I P+
Sbjct: 4 SSTSRLRFLSLVGALGLTGLLSACSSDPT---LYTLAPLPGVSQAG-GPAVVEIRTPVVS 59
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI--Y 123
L+ + I+ S + + GS WS+ LP M+ L+ + +TV + +
Sbjct: 60 ARLDRDTIVKASEDYQTKLASGSSWSEALPDMLGHTLMTDLAQRLPGTTVFAQDDAVTTT 119
Query: 124 ADYQIISAIRSFEINIDRHCAIIT-MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
+ IR+FE + H + +S+ ++ V + +
Sbjct: 120 PAAYVELTIRNFEADSAGHALVTGMLSVHPAGKMIGPVMTTPVVWQSPEPVASSTAKLTA 179
Query: 183 SLNRAFSRISSEIID 197
+L++ + I+ +
Sbjct: 180 ALSQGVASIADQAAA 194
>gi|307821989|ref|ZP_07652221.1| protein of unknown function DUF330 [Methylobacter tundripaludum
SV96]
gi|307736555|gb|EFO07400.1| protein of unknown function DUF330 [Methylobacter tundripaludum
SV96]
Length = 190
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 14/187 (7%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTE----STKYDESVQRHIQLIITEPITEKILNSEDI 73
+A+ T LS+C P Y L + ++ Q+ + +L + I
Sbjct: 1 MALSTVTLLSACISTP-PTQFYVLEPLSEPPPSSTTTAEKKRQIGVGPVSIPTLLERKQI 59
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKL---IANFENNGKISTVVKPNQGIYADYQIIS 130
+ R ++ QW+ L + L +A + I G Y+II
Sbjct: 60 VTRLPDNSVKIAEFHQWASPLKDNVAQVLTHNLATLQTGDLIRAYPWSAYGTID-YRIII 118
Query: 131 AIRSFEINIDRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
I F+ R + I+N +++L+ + L + +++LN+
Sbjct: 119 DIIRFDT---RPEQTVDFEANWAIMNEKNHTLLSHGRSKIAHPLNDPSYPAAVKALNKVL 175
Query: 189 SRISSEI 195
S S E+
Sbjct: 176 SEFSQEL 182
>gi|283833764|ref|ZP_06353505.1| putative outer membrane protein [Citrobacter youngae ATCC 29220]
gi|291070425|gb|EFE08534.1| putative outer membrane protein [Citrobacter youngae ATCC 29220]
Length = 187
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 67/181 (37%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + + Q + L + + L ++
Sbjct: 5 LVVMMAVWLTSCSSSGENKSYYQLPIAQGGVQSTANQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+ N V G D + + F
Sbjct: 65 QTSDVQYVIANNNLWASPLDQQLRNTLVTNLSMQLPGWVVASQPLGSTQD-TLNVTVTGF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ FH+E KD ++ L A+S+ ++ I
Sbjct: 124 HGRYDGK--VIVSGEWLLNHQGQLI--KRPFHIEAVQTKDGYDEMVKVLANAWSQEATAI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|171915888|ref|ZP_02931358.1| hypothetical protein VspiD_31995 [Verrucomicrobium spinosum DSM
4136]
Length = 195
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWS----DKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
L+ ++++R I +W+ D R++ L + + + G+
Sbjct: 59 LDRPNLVMREDGTRIAVAESHRWAGKLEDNFARVLATNLGRQLKTGNLRTYPWDTDDGLK 118
Query: 124 ADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
YQI + + A + S ++ + D L+ + + E L KD + +
Sbjct: 119 --YQISLDLTHLHGTSEGD-AFMEASWRVYSLPDRKLIATRSWSGTEPLSKDGYDALVAA 175
Query: 184 LNRAFSRISSEI 195
+R +R + E+
Sbjct: 176 ESRLIARFAVEV 187
>gi|294086099|ref|YP_003552859.1| hypothetical protein SAR116_2531 [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292665674|gb|ADE40775.1| hypothetical protein SAR116_2531 [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 207
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/193 (16%), Positives = 65/193 (33%), Gaps = 10/193 (5%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNI-YDL-TESTKYDESVQRHIQLIITEPITE 65
+I I ++ VLL + Y++ T + IQL +
Sbjct: 1 MIHSAIRFGAIVVLLTIIGGCTSPAPRMADTHYNIETSIPPIHYGTEATIQLTKLD---M 57
Query: 66 KILNSEDIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
+ + S +V + PI++Q G W +++ + ++
Sbjct: 58 RGIQSSRALVIISDTDPIQLQERRGHYWHSAPALLLKRTISETLDSASHDIRFGTNVTMQ 117
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
DY + +R F D H A + M +I D ++ V L+ + L+ +
Sbjct: 118 DPDYTMDIDMRLFAFTPDVH-ATVEMGF-VIRNQDGDIMLHDVLLKTASLDGASSLNGVH 175
Query: 183 SLNRAFSRISSEI 195
L A ++ +
Sbjct: 176 GLQSALAKALEAL 188
>gi|77456732|ref|YP_346237.1| hypothetical protein Pfl01_0504 [Pseudomonas fluorescens Pf0-1]
gi|77380735|gb|ABA72248.1| putative lipoprotein [Pseudomonas fluorescens Pf0-1]
Length = 237
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 72/191 (37%), Gaps = 10/191 (5%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+ + + L+ C H PV++Y L + + + +++ I L
Sbjct: 1 MMTSLRPLIFLLAGVLGLAGCSVHQ-PVSLYQLDSGSPAQPAQSAGMAVLLGPVIVADYL 59
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKI---STVVKPNQ-GIYA 124
E ++ R +Q + +W+ L I L+ + G + V+ P G
Sbjct: 60 QRETLLQRQPDGSLQASVDGRWAGSLSSDIDQLLLR--QVAGHLDSQRVVLAPATLGFTP 117
Query: 125 DYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
D Q++ I + + AI+ ++I+ + ++ H++E+ +Q+
Sbjct: 118 DVQVLLTITRLDS-GAKQPAILDAQWRLIDRR-GQVRDNRIVHLQEQHAGT-TAAQVQAQ 174
Query: 185 NRAFSRISSEI 195
R++ ++
Sbjct: 175 GVLLQRLAEQL 185
>gi|237730908|ref|ZP_04561389.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226906447|gb|EEH92365.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 187
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/181 (17%), Positives = 68/181 (37%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + + Q + L + + L ++
Sbjct: 5 LVVMMAVWLTSCSSSGENKSYYQLPIAQGGVQSSANQGNRLLWVEQIAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVQYVIANNNLWASPLDQQLRNTLVANLSMQLPGWVVASQPLGSTQD-TLNVTVTGF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ FH+E KD ++ L A+S+ ++ I
Sbjct: 124 HGRYDGK--VIVSGEWLLNHQGQLI--KRPFHIEAVQTKDGYDEMVKVLANAWSQEATAI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|261339279|ref|ZP_05967137.1| hypothetical protein ENTCAN_05518 [Enterobacter cancerogenus ATCC
35316]
gi|288319139|gb|EFC58077.1| putative outer membrane protein [Enterobacter cancerogenus ATCC
35316]
Length = 188
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 80/184 (43%), Gaps = 10/184 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLT---ESTKYDESVQRHIQLIITEPITEKILNSEDII 74
L ++ L++C + + Y L +S + Q + L + + L ++
Sbjct: 5 LVIVGALVLTACSSGSENKSYYQLPLNAQSGAQSSASQGNRLLWVEQVAVPDYLAGNGVV 64
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-QIISAIR 133
++S ++ + W+ L + ++ L+AN +G++ + +Q + +D + +
Sbjct: 65 YQTSDVQYVIANNNLWASPLDQQLRNTLVANL--SGQLPGWIVASQPLGSDQDTLNVTVT 122
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H L+ ++ FH+E K +KD ++ L + +++ S+
Sbjct: 123 GFHGRYDG---AVVISGEWLLNHQGQLI-KRPFHLEMKQQKDGYDEMVKVLAQGWAQESA 178
Query: 194 EIID 197
I
Sbjct: 179 NIAR 182
>gi|330427911|gb|AEC19245.1| putative lipoprotein [Pusillimonas sp. T7-7]
Length = 219
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 22/204 (10%), Positives = 70/204 (34%), Gaps = 26/204 (12%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES---------VQRHIQLIIT 60
+ K+++C LA +L ++ P + Y L + + + +
Sbjct: 4 RLKVLACGLAGVLLAGCAA----TKPSHYYTLMATAPQQPATGQAAESSASASRYAISVD 59
Query: 61 EPITEKILNSEDIIVR-SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
+ ++ I++ ++ L S W+ L +Q L ++E + ++ +
Sbjct: 60 TVELPEQVDRPQIVITDPKSTQVMPLGDSLWASPLSYQLQNAL--SYELSSQLGVLDVSA 117
Query: 120 QGIYADY---QIISAIRSFEINIDRHCAIITMSL--KIINAHDNSLVGQKVFHVEEKLE- 173
GI +++ ++ FE + + + ++ + + +++
Sbjct: 118 TGIPGSLPVWRVLMQVQRFESLYNE---RVLLDATWRLTPINQGK-KASIICRGAAQVQV 173
Query: 174 KDNKLHFIQSLNRAFSRISSEIID 197
+ + +A +++ I
Sbjct: 174 QQGVSAMVAGHQQALHQLAELIAR 197
>gi|70734053|ref|YP_257693.1| hypothetical protein PFL_0549 [Pseudomonas fluorescens Pf-5]
gi|68348352|gb|AAY95958.1| Protein of unknown function (DUF330) family [Pseudomonas
fluorescens Pf-5]
Length = 237
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 71/192 (36%), Gaps = 11/192 (5%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
++ + + L+ C H PV++Y L + + + +++ +
Sbjct: 1 MMTALRLPLVFLLAGVLGLAGCSVHQ-PVSLYQLDSGSPA-QPASAGMSVLLGPVLIADY 58
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST----VVKPNQGIY 123
L E ++ R +Q +W+ L I L+ + G + + + G
Sbjct: 59 LQRETLLQRQDDGSLQASTDGRWAGSLSSDIDQLLLR--QVAGHLDSQRVVLAPATSGFT 116
Query: 124 ADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
D Q++ +I + A++ ++I+ + ++ H++E+ +Q+
Sbjct: 117 PDVQVLLSITRLDS-GKSQPAVLDAQWRLIDRR-GQVRDNRIVHLQEQHAGTTASQ-VQA 173
Query: 184 LNRAFSRISSEI 195
R++ ++
Sbjct: 174 QGVLLQRLAEQL 185
>gi|161522847|ref|YP_001585776.1| hypothetical protein Bmul_5821 [Burkholderia multivorans ATCC
17616]
gi|189348317|ref|YP_001941513.1| hypothetical protein BMULJ_05701 [Burkholderia multivorans ATCC
17616]
gi|160346400|gb|ABX19484.1| protein of unknown function DUF330 [Burkholderia multivorans ATCC
17616]
gi|189338455|dbj|BAG47523.1| hypothetical protein BMULJ_05701 [Burkholderia multivorans ATCC
17616]
Length = 212
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/205 (13%), Positives = 70/205 (34%), Gaps = 14/205 (6%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNN----PVNIY----DLTESTKYDESVQRH 54
K++ ++ + S A+ + +L F P Y + +
Sbjct: 7 KQIGTSVRDAVKSAPAALAVTIALGGTFVVAGCGHSPPTCYVALSPVASAAPRATEPVAP 66
Query: 55 IQL-IITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIS 113
+QL + P L ++V+ S + G++W L M++ L +
Sbjct: 67 VQLTAVHVPAALDRLE---VVVQRSANRLVIDDGARWGAPLDLMMRETLTQDLLARLPEG 123
Query: 114 TVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSL-KIINAHDNSLVGQKVFHVEEKL 172
VV P AD + + + + + D + ++ +++ + + + +L
Sbjct: 124 AVVLPGAPRQADTRTLV-VTVLDAHADESGTLTFLAAWTLLSGRPERVTSSRETTLTAQL 182
Query: 173 EKDNKLHFIQSLNRAFSRISSEIID 197
+ +L+R +++ I
Sbjct: 183 TSRDAAAQADALSRVLGQLADRIAS 207
>gi|207728063|ref|YP_002256457.1| protein of unknown function duf330 [Ralstonia solanacearum MolK2]
gi|206591307|emb|CAQ56919.1| protein of unknown function duf330 [Ralstonia solanacearum MolK2]
Length = 220
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 51/140 (36%), Gaps = 3/140 (2%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+ + + + +C ++ L E+ + ++ + L
Sbjct: 7 TRASSLRLACVAGAAALMGACASPEPTLHTLSLRAEPPAPEATRIQRAFRLSAVRVPERL 66
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV--KPNQGIYADY 126
+ I++R+S ++Q L +W+ ++ L A+ + V P G+ Y
Sbjct: 67 DKPQIVLRTSDSQVQELEQQRWAAPFGAELRDALSADLADALSAVDVGGATPPAGV-PLY 125
Query: 127 QIISAIRSFEINIDRHCAII 146
+I + ++ F+ + + +
Sbjct: 126 RIGADVQRFDARPGQDVSAL 145
>gi|213158600|ref|YP_002319898.1| hypothetical protein AB57_2554 [Acinetobacter baumannii AB0057]
gi|213057760|gb|ACJ42662.1| conserved hypothetical protein [Acinetobacter baumannii AB0057]
Length = 213
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 78/197 (39%), Gaps = 25/197 (12%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK-ILNSEDIIVRS 77
+L ++++C P N Y LT K +Q+I P+ L+ ++++
Sbjct: 1 MLLTAIAMTACSSSPTP-NYYTLTP--KVTPVSNSTVQVIEVLPVGIPDRLDRAPLVLQD 57
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----YQIISAIR 133
S + L +W+ L ++ L A + K+ + + G+ + Y++ +
Sbjct: 58 SNGKSTVLDNERWTSTLGTQLRDTLSAGLQQ--KLGAIDSYSSGLSGNNQPLYRVSTDFS 115
Query: 134 SFEINIDRHCAI-ITMSLK------IINAHDNSLVGQK------VFHVEEKLEKD--NKL 178
F+I + + + ++ +K + + + ++ + ++ +++
Sbjct: 116 HFDIVDNSNINVAVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKKME 175
Query: 179 HFIQSLNRAFSRISSEI 195
+ + N A S+I + +
Sbjct: 176 AIVGASNEAMSQIINTV 192
>gi|326315187|ref|YP_004232859.1| hypothetical protein Acav_0369 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323372023|gb|ADX44292.1| protein of unknown function DUF330 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 221
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 30/193 (15%), Positives = 62/193 (32%), Gaps = 23/193 (11%)
Query: 27 SSCFFHNNP-VNIYDLTESTKYDESVQRHIQLI-ITEPI---TEKILNSEDIIVR---SS 78
S P ++YD +R L I P + S ++ R
Sbjct: 27 CSALPAPPPRADVYDFGPGPLAQAPAERGAPLPPIALPEVAVAGPVEGSTAVLYRLAYDD 86
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI-------YADYQIISA 131
P ++ ++WS +++Q L G V+ ++G +
Sbjct: 87 PRHLRPYGQARWSQPPAQLVQQALRDQL---GLRRPVLMGDEGASQLVDTGKPPAVLRVE 143
Query: 132 IRSFEINIDRHCA---IITMSLKIINA--HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
I F A ++ + + ++ LV Q+VF ++ + ++
Sbjct: 144 IEEFSQVFQAPKASTGVLRLRASLADSTQAGEKLVAQRVFVIQRPAPTADARGGTLAMAE 203
Query: 187 AFSRISSEIIDWT 199
A ++ S E+ W
Sbjct: 204 AAAQASQEVAQWV 216
>gi|148549989|ref|YP_001270091.1| hypothetical protein Pput_4787 [Pseudomonas putida F1]
gi|148514047|gb|ABQ80907.1| protein of unknown function DUF330 [Pseudomonas putida F1]
Length = 251
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 58/164 (35%), Gaps = 5/164 (3%)
Query: 34 NPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDK 93
PV +Y L S + +++ L E + R + +W+
Sbjct: 40 QPVALYQLDSGDPGQPSQSAGMAVVLGPVSVADYLQRETFLQRQPDGSLSAATDGRWAGS 99
Query: 94 LPRMIQLKLIANFE-NNGKISTVVKPNQ-GIYADYQIISAIRSFEINIDRHCAIITMSLK 151
L I L+ V+ P G D Q++ +I + AI+ +
Sbjct: 100 LSSDIDQLLVRQLAWRLDSQRVVLAPATAGFSPDVQVLLSITRLDS-GKNQPAILDAQWR 158
Query: 152 IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+++ + ++ H+E++ E +Q+ + +++ ++
Sbjct: 159 LLDRR-GRVRDNRIIHLEQQHEGSE-SSQVQAQGQLLQKLAEQL 200
>gi|296103038|ref|YP_003613184.1| hypothetical protein ECL_02694 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
gi|295057497|gb|ADF62235.1| hypothetical protein ECL_02694 [Enterobacter cloacae subsp. cloacae
ATCC 13047]
Length = 188
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 78/190 (41%), Gaps = 9/190 (4%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLT---ESTKYDESVQRHIQLIITEPITEKILNSEDII 74
LA++ L++C + + Y L + + Q + L + + L ++
Sbjct: 5 LAIVGAMVLTACSSGSETKSYYQLPLMAQVGTQSTASQGNRLLWVEQVAVPDYLAGNGVV 64
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
++S ++ + W+ L + ++ L+AN + V G D + +
Sbjct: 65 YQTSDVQYVIANNNLWASPLDQQLRNTLVANLSSQLPGWVVASQPLGSDQD-TLNVTVTG 123
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F D + +S + + H L+ ++ FH+E K +KD ++ L + +++ S+
Sbjct: 124 FHGRYDG---AVVISGEWLLNHQGQLI-KRPFHLELKQQKDGYDEMVKVLAQGWAQESAN 179
Query: 195 IIDWTLSSLP 204
I +S LP
Sbjct: 180 IAR-EISRLP 188
>gi|73542365|ref|YP_296885.1| putative lipoprotein [Ralstonia eutropha JMP134]
gi|72119778|gb|AAZ62041.1| putative lipoprotein [Ralstonia eutropha JMP134]
Length = 207
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/205 (12%), Positives = 65/205 (31%), Gaps = 18/205 (8%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ----LIIT 60
+N+I + + S+ + + + + +
Sbjct: 2 MNRIHASRACALSMLFAATVLAGCASPEPRYYTLAQGPAADASAVTPAVPASDSLWIEVA 61
Query: 61 EPITEKILNSEDIIVRS----SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
+ LN ++VR + ++ L S+WS LP ++ L + + + V
Sbjct: 62 PVRVPERLNRPQLVVRDPRNGNESGLRLLDLSRWSSPLPDEMRDALSQRLQAS--LGAVD 119
Query: 117 KPNQGI---YADYQIISAIRSFEINIDRHC-AIITMSLKIINAHDNSLVGQKVFHVEEKL 172
QG+ Y+I + + + +I + A I +++ D +V + +
Sbjct: 120 TYQQGLADVAPVYRITTEVVRLDADIGQRAGATINWTVR--RLPDGKVVSGRT-QSDLPA 176
Query: 173 EKDNKLHFIQSLNRAFSRISSEIID 197
+ + S + +I
Sbjct: 177 PG-EVDAVVAAYREILSGTAGDIAA 200
>gi|157146357|ref|YP_001453676.1| hypothetical protein CKO_02116 [Citrobacter koseri ATCC BAA-895]
gi|157083562|gb|ABV13240.1| hypothetical protein CKO_02116 [Citrobacter koseri ATCC BAA-895]
Length = 187
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 62/169 (36%), Gaps = 7/169 (4%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTK--YDESVQRHIQLIITEPITEKILNSEDIIV 75
L V++ L+SC + Y L + + Q + L + + L ++
Sbjct: 5 LVVMMAFWLTSCSSSGENKSYYQLPVAQGGVQSTASQGNRLLWVEQVSVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVQYVIASNNLWASPLDQQLRNTLVANLSAQLPGWVVASQPLGSVQD-TLNVTVTGF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
D +I ++N + ++ FH+E ++D ++ L
Sbjct: 124 HGRYDGK--VIVSGEWLLNHQGQLI--KRPFHIETAQQQDGYDEMVKVL 168
>gi|254492568|ref|ZP_05105740.1| hypothetical protein MDMS009_2910 [Methylophaga thiooxidans DMS010]
gi|224462460|gb|EEF78737.1| hypothetical protein MDMS009_2910 [Methylophaga thiooxydans DMS010]
Length = 213
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 47/152 (30%), Gaps = 5/152 (3%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESV-QRHIQLII 59
M+K + ++ L + C S + Y + + R L+I
Sbjct: 1 MNKAFIQYKPVIVVLLCLMLSACFSWGGGEDEETTPHYYVVDVDRGSVATEFARDRVLLI 60
Query: 60 TEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
++ I+ R E Q ++ M +L + G S VV
Sbjct: 61 KPVRVVPHFENKTIVFRVGENEFQSQPPHEFFSDPQDMFTNQLRRWLQKTGLFSQVVTD- 119
Query: 120 QGIYADYQIISAIRSFEIN---IDRHCAIITM 148
I ADY + SA+ A++ M
Sbjct: 120 DSIAADYVLESAVTGLYGEKRAAYSPQAVVEM 151
>gi|260219762|emb|CBA26617.1| hypothetical protein Csp_H39500 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 230
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 33/208 (15%), Positives = 75/208 (36%), Gaps = 21/208 (10%)
Query: 16 CSLAVLLCTSLSSCF-FHNNPVNIYDLTESTKYDESVQRHIQL---IITEPITEKILNSE 71
++L L+ C +YD R L ++ E + L++
Sbjct: 24 ALFGLMLAGVLAGCAAPRPGTALVYDFGPGAVALAPANRMAPLPPLVLAEVQAPQSLDNT 83
Query: 72 DIIVR---SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD--- 125
++ R S +Q ++WS ++++ +L A V+ N+G+ +
Sbjct: 84 SVLYRLNYSDAHVLQPYAQARWSMPPAQLLRQQLRAALSA---QRAVLNANEGVQSPAGA 140
Query: 126 YQIISAIRSFEINIDRHCA---IITMSLKIINAHDN--SLVGQKVFHVEEKLEKDNKLHF 180
+ + F D A ++ + + + +LV Q+V V+ +
Sbjct: 141 LVLRLELEEFSQIFDSPQASSGLLRLRATLSQSAPGGEALVAQRVVLVKSPSVSPDAAGG 200
Query: 181 IQSLNRAFSRISSEIIDW---TLSSLPL 205
+++L A + ++ W T ++LP
Sbjct: 201 VRALAAAAALAVEQLDQWVQQTQAALPA 228
>gi|114777672|ref|ZP_01452632.1| lipoprotein, putative [Mariprofundus ferrooxydans PV-1]
gi|114551888|gb|EAU54422.1| lipoprotein, putative [Mariprofundus ferrooxydans PV-1]
Length = 204
Score = 45.7 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 30/201 (14%), Positives = 71/201 (35%), Gaps = 16/201 (7%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRH----IQLIITEPI 63
+++ + L L L + + Y L + + Q ++ I+
Sbjct: 1 MMRAIAVLKFLVPGLTALLCAACSVSPVTRYYVLNPVIRAEAPAQTDHAPGKRIGISLLR 60
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQ----LKLIANFENNGKISTVVKPN 119
+ L+ I+ RS+ E++ +W + I+ L E+ G +V+ +
Sbjct: 61 LPQYLDRASIVTRSTSNELKLAEYDRWGGNPEKNIRQVMNRNLSQLLESAGF--SVIAAD 118
Query: 120 QGIYADYQIISAIRSFEINIDRHCAIITMSL--KIINAHDNSLVGQKVFHVEEKLEK-DN 176
+ + I I FE D ++ +S I++ L G+ + + +
Sbjct: 119 SDLSPELNIEIEITRFERFPDG---VVRLSAVWHILDPSGKLLTGRSSDLSSQPVAGASD 175
Query: 177 KLHFIQSLNRAFSRISSEIID 197
+ +++ ++S I D
Sbjct: 176 YDAIVAAMSDLLGQLSHVIAD 196
>gi|330875277|gb|EGH09426.1| lipoprotein [Pseudomonas syringae pv. morsprunorum str. M302280PT]
Length = 207
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 59/190 (31%), Gaps = 12/190 (6%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + + +C + + Y L T + Q + I ++ +
Sbjct: 7 LMVLAAALGMGAC--TSTQTHYYTLIAPMGATSNSAARPAPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P G + + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERRFGSRDMAGLPKNGDQPVLSVRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + H A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGHYALIDVVWTLGLREAGATAGSKRQSLTCSSVIREQAGEGMENLILAHQKA 183
Query: 188 FSRISSEIID 197
S ++ +I
Sbjct: 184 VSTLAEKIAA 193
>gi|226939553|ref|YP_002794626.1| hypothetical protein LHK_00624 [Laribacter hongkongensis HLHK9]
gi|226714479|gb|ACO73617.1| hypothetical protein LHK_00624 [Laribacter hongkongensis HLHK9]
Length = 212
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 17/178 (9%), Positives = 52/178 (29%), Gaps = 5/178 (2%)
Query: 23 CTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
++ P Y LT + + + N ++ + S +
Sbjct: 18 LSACQILPTEITPPTTYALTLPAPVPVTAPALPAVRLGTTTVGAPWNGTALVYQLSDVRF 77
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+ ++ L + V+ P A +++ + I + +
Sbjct: 78 SADAYHRLLSPASTLLNTALADWLGARQRFEAVLAPGSPAPAPWRLETGITALYGDFRSA 137
Query: 143 CA-IITMSLKIINAHDNSLVGQKVF----HVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
A +S + + ++ +++ + LE + + + + R+ E+
Sbjct: 138 SAPQAVISAQFVIVDTAAVPRRRLLVLDLNQRIPLESATPVALVAGYRQGWLRMLEEL 195
>gi|184158723|ref|YP_001847062.1| hypothetical protein ACICU_02403 [Acinetobacter baumannii ACICU]
gi|183210317|gb|ACC57715.1| uncharacterized protein conserved in bacteria [Acinetobacter
baumannii ACICU]
Length = 207
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 75/190 (39%), Gaps = 25/190 (13%)
Query: 26 LSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK-ILNSEDIIVRSSPIEIQY 84
+++C P N Y LT K +Q+I P+ L+ ++++ S +
Sbjct: 1 MTACSSSPTP-NYYTLTP--KVTPVSNSTVQVIEVLPVGIPDRLDRAPLVLQESNGKSTV 57
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----YQIISAIRSFEINID 140
L +W+ L ++ L A + K+ + + G+ + Y++ + F+I +
Sbjct: 58 LDNERWTSTLGTQLRDTLSAGLQQ--KLGAIDSYSSGLSGNNQPLYRVSTDFSHFDIVDN 115
Query: 141 RHCAI-ITMSLK------IINAHDNSLVGQK------VFHVEEKLEKD--NKLHFIQSLN 185
+ + ++ +K + + + ++ + ++ +++ + + N
Sbjct: 116 SNINVAVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKKMEAIVSASN 175
Query: 186 RAFSRISSEI 195
A S+I + I
Sbjct: 176 EAMSQIINTI 185
>gi|312958635|ref|ZP_07773155.1| protein of unknown function DUF330 [Pseudomonas fluorescens WH6]
gi|311287178|gb|EFQ65739.1| protein of unknown function DUF330 [Pseudomonas fluorescens WH6]
Length = 266
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/192 (13%), Positives = 69/192 (35%), Gaps = 10/192 (5%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
++ + + L+ C H PV++Y L + + +++ +
Sbjct: 31 MMTAPRLPFIFMLAGLLGLAGCSTHQ-PVSLYQLDSGSPAQPEQAAGMAVLLGPVVVADY 89
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST----VVKPNQGIY 123
L E ++ R S +Q +W+ L I ++ + G + + + G
Sbjct: 90 LQRETLLQRQSDGSLQGSTDGRWAGSLSSDINQLVLR--QVAGHLDSQRVVLAPAPTGFS 147
Query: 124 ADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
D Q++ I + AI+ ++I+ + ++ H++E+ +Q+
Sbjct: 148 PDVQVLLTITRLDS-GKSQPAILDAQWRLIDRR-GQVRDNRIVHLQEEHAGTTASQ-VQA 204
Query: 184 LNRAFSRISSEI 195
++ ++
Sbjct: 205 QGVLLQHLAQQL 216
>gi|254458298|ref|ZP_05071724.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
gi|207085134|gb|EDZ62420.1| conserved hypothetical protein [Campylobacterales bacterium GD 1]
Length = 73
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 10/61 (16%), Positives = 33/61 (54%)
Query: 138 NIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
++D+ A + +SL +I++ + ++ K F +++ + ++ L+ A + + + +D
Sbjct: 7 DLDKSDASVGISLTLIDSISSEVISTKTFSAKKETSSPDASGGVKGLDAALTNVLEQGLD 66
Query: 198 W 198
+
Sbjct: 67 F 67
>gi|229588057|ref|YP_002870176.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
gi|229359923|emb|CAY46777.1| putative lipoprotein [Pseudomonas fluorescens SBW25]
Length = 237
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/190 (12%), Positives = 71/190 (37%), Gaps = 6/190 (3%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
++ + + L+ C H PV++Y L + + + +++ +
Sbjct: 1 MMTAPRLPFIFMLAGLLGLAGCSTHQ-PVSLYQLDSGSPAQPAQTAGMAVLLGPVVVADY 59
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIA--NFENNGKISTVVKPNQGIYAD 125
L E ++ R + +Q +W+ L I ++ + + + + G D
Sbjct: 60 LQRETLLQRQNDGSLQGSTDGRWAGSLSSDINQLMLRQVAGQLDSQRVVLAPAPAGFSPD 119
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLN 185
Q++ I + + AI+ ++I+ + ++ H++E+ + +Q+
Sbjct: 120 VQVLLTITRLDSGTSQP-AILDAQWRLIDRR-GQVRDNRIVHLQEEHTG-STASQVQAQG 176
Query: 186 RAFSRISSEI 195
++ ++
Sbjct: 177 VLLQHLAQQL 186
>gi|156934561|ref|YP_001438477.1| hypothetical protein ESA_02395 [Cronobacter sakazakii ATCC BAA-894]
gi|156532815|gb|ABU77641.1| hypothetical protein ESA_02395 [Cronobacter sakazakii ATCC BAA-894]
Length = 187
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 68/183 (37%), Gaps = 9/183 (4%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST-KYDESVQRHIQ--LIITEPITEKILNSEDII 74
L + LS+C Y L ST S Q L + + L ++
Sbjct: 5 LPFVAVALLSACSTTQE-TTWYQLPASTAPVTRSAPMDSQHLLWVEQVSVPDYLAGNGVV 63
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+++ ++ + W+ L + ++ L+ N V G D + +
Sbjct: 64 YQTTDVQYVIASQNLWASPLDQQLRNTLVTNLSATLPGWVVSAQPLGAEQD-TLNVNVTG 122
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F D + +S + + H L+ ++ F+ E K ++D +++L +A+ + +
Sbjct: 123 FHGRYDG---RVIVSGEWLLKHKGQLI-KRPFYTELKQQQDGYDAMVKTLAQAWQQQAKT 178
Query: 195 IID 197
I D
Sbjct: 179 IAD 181
>gi|170723861|ref|YP_001751549.1| hypothetical protein PputW619_4703 [Pseudomonas putida W619]
gi|169761864|gb|ACA75180.1| protein of unknown function DUF330 [Pseudomonas putida W619]
Length = 236
Score = 45.7 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 60/164 (36%), Gaps = 5/164 (3%)
Query: 34 NPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDK 93
PV +Y L S + +++ L E + R + + +W+
Sbjct: 25 QPVALYQLDSGDPGQPSQSAGMAVVLGPVSVADYLQRETFLQRQADGSLSSATDGRWAGS 84
Query: 94 LPRMIQLKLIANFE-NNGKISTVVKP-NQGIYADYQIISAIRSFEINIDRHCAIITMSLK 151
L I L+ V+ P + G D Q++ +I + AI+ +
Sbjct: 85 LSADIDQLLVRQLAWRLDSQRVVLAPASSGFSPDVQVLLSITRLDS-GKNQPAILDAQWR 143
Query: 152 IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+++ ++ ++ H+E+ E +Q+ + +++ ++
Sbjct: 144 LLDRR-GNVRDNRIVHLEQPHEGSE-SSQVQAQGQLLQKLAEQL 185
>gi|167035953|ref|YP_001671184.1| hypothetical protein PputGB1_4964 [Pseudomonas putida GB-1]
gi|166862441|gb|ABZ00849.1| protein of unknown function DUF330 [Pseudomonas putida GB-1]
Length = 214
Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 60/164 (36%), Gaps = 5/164 (3%)
Query: 34 NPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDK 93
PV +Y L S + +++ L E + R + + +W+
Sbjct: 3 QPVALYQLDSGDPGQPSQSAGMAVVLGPVSVADYLQRETFLQRQADGSLSAATDGRWAGS 62
Query: 94 LPRMIQLKLIANFE-NNGKISTVVKP-NQGIYADYQIISAIRSFEINIDRHCAIITMSLK 151
L I L+ V+ P G D Q++ +I + D+ AI+ +
Sbjct: 63 LSSDIDQLLVRQLAWRLDSQRVVLAPATTGFSPDVQVLLSITRLDSGKDQP-AILDAQWR 121
Query: 152 IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+++ + ++ H+E+ E +Q+ + +++ ++
Sbjct: 122 LLDRR-GHVRDNRIVHLEQPHEGSE-SSQVQAQGQLLQKLAEQL 163
>gi|163803693|ref|ZP_02197554.1| hypothetical protein 1103602000423_AND4_00025 [Vibrio sp. AND4]
gi|159172504|gb|EDP57368.1| hypothetical protein AND4_00025 [Vibrio sp. AND4]
Length = 189
Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 70/185 (37%), Gaps = 10/185 (5%)
Query: 20 VLLCTSLSSCFFHNNPV-NIYDLTESTKY---DESVQRHIQLIITEPITEKILNSED-II 74
+L+ L+ C +Y L E++ D + QL++ P+ ++ I+
Sbjct: 6 LLISALLAGCSSAPENSGALYVLPEASSPKVSDAMIALRSQLVV-RPVELAGYLTDSGIV 64
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY--ADYQIISAI 132
R+S +I +W+ + I ++I + V+ N + ++ ++
Sbjct: 65 YRTSETKIVQAKHYRWAHNISEQITQRVIGELRSKQSQYWPVEVNNLLDQSGGSKLQLSL 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F + + A I II+A + ++ L+ D + +L+ + ++
Sbjct: 125 SKFNGSYQGN-AEIEGEWLIIDAS-GKVKNSAPIKIKMPLQDDGYDALVDALSVGLNNLT 182
Query: 193 SEIID 197
+I
Sbjct: 183 DQIAA 187
>gi|206580056|ref|YP_002239407.1| putative lipoprotein [Klebsiella pneumoniae 342]
gi|206569114|gb|ACI10890.1| putative lipoprotein [Klebsiella pneumoniae 342]
Length = 187
Score = 45.3 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 8/184 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDI 73
L +C ++C Y L +S L + + L +
Sbjct: 4 WLLVAAVCVM-TACSSGGESKTYYQLPVVQGGAQSAASQGSRLLWVEQVSIPDYLAGNGV 62
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ +++ ++ + W+ L + ++ L+AN V G D + A+
Sbjct: 63 VYQTTDVQYVIANNNLWASPLDQQLRTTLVANLSQQLPGWVVSSQPLGSEQD-TLNVAVN 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H L+ ++ F++ K ++D +++L +A+S+ +
Sbjct: 122 GFHGRYDG---RVIVSGEWLLKHQGQLI-KRPFNIVLKQQQDGYDAMVKTLAQAWSQEAV 177
Query: 194 EIID 197
I
Sbjct: 178 AIAG 181
>gi|170769171|ref|ZP_02903624.1| putative lipoprotein [Escherichia albertii TW07627]
gi|170121823|gb|EDS90754.1| putative lipoprotein [Escherichia albertii TW07627]
Length = 187
Score = 45.3 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 65/181 (35%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQGGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ F +E +D +++L A+++ ++ +
Sbjct: 124 NGRYDGK--VIVSGEWLLNHQGQLI--KRPFRLEGVQNQDGYDEMVKALASAWNQEAAAM 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|224437096|ref|ZP_03658077.1| hypothetical protein HcinC1_03970 [Helicobacter cinaedi CCUG 18818]
gi|313143566|ref|ZP_07805759.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
gi|313128597|gb|EFR46214.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
Length = 201
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 26/202 (12%), Positives = 68/202 (33%), Gaps = 16/202 (7%)
Query: 9 IKKKIISCSLAVLLCTSLSSCF----FHNNPVNIYD----LTESTKYDESVQRHIQLIIT 60
+ KK L ++ +LSSC P Y L + ++ +
Sbjct: 1 MSKKYRILGLGIVTILTLSSCVDVKIASQIPKVTYLSLQKLQTQANDAKCKANKGKIGLL 60
Query: 61 EPITEKIL-NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
+ ++ I+ + ++I L +W D +M++ L+ E + P
Sbjct: 61 QVNANAPFNDTAIILHNTQTLQISELEHKKWVDSPNKMLESNLLQALEQ-NCFQVAISPF 119
Query: 120 QGIYADYQIISAIRSFEINIDRH--CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNK 177
+ + ++ ++ D A +++ +++N + E L+
Sbjct: 120 GTQKLNKILKLSLLGLQVVEDGGKYKAQMSVFYEVLNTSTTQSSKSGIITQEVALQSLED 179
Query: 178 LHFIQSLNRA----FSRISSEI 195
F ++ +A ++ ++
Sbjct: 180 ESFAKNFVKANELVIDKLLKQL 201
>gi|222833235|gb|EEE71712.1| predicted protein [Populus trichocarpa]
Length = 144
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 48/133 (36%), Gaps = 15/133 (11%)
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY-------ADYQIIS 130
+ E++ ++WS ++Q +L + G V+ ++ + +
Sbjct: 9 NGQELRPYQLARWSQPPALLLQQRLRSQL---GLQRPVLASSESVAQPRLQGAVPTLLRV 65
Query: 131 AIRSFEINIDRHCA---IITMSLKIINAHDN--SLVGQKVFHVEEKLEKDNKLHFIQSLN 185
I F D + ++ + ++ L+GQK+F V + Q+L
Sbjct: 66 DIEEFSQVFDAPGSSAGVVRLRATLVEQSGAVDRLLGQKLFEVRSPAASGDAAGGAQALA 125
Query: 186 RAFSRISSEIIDW 198
+A ++I W
Sbjct: 126 KATDTAIAQIDAW 138
>gi|224824235|ref|ZP_03697343.1| protein of unknown function DUF330 [Lutiella nitroferrum 2002]
gi|224603654|gb|EEG09829.1| protein of unknown function DUF330 [Lutiella nitroferrum 2002]
Length = 192
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 31/175 (17%), Positives = 64/175 (36%), Gaps = 12/175 (6%)
Query: 28 SCFFHNNPVNIYDL---TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
C V+ Y L T +T +V+ +IQL + P LN +I+ +S + I
Sbjct: 15 GCASAPE-VHYYRLSDETMATPQAVAVEGNIQLSVRLPD---YLNDRNIVYQSDDVTIAA 70
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA-DYQIISAIRSFEINIDRHC 143
+ W++ + I +L A P G D + F +
Sbjct: 71 ARQNLWAEPPEQAIGRRLSAELGLLRPHYGWSTPLSGGGPRDPVLEVVFDQFNGRFNGRA 130
Query: 144 AIITMSLK-IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
+S ++ ++ + F +E + + D +++LN+ ++ +I
Sbjct: 131 V---LSGHWLLRDGRSATPSRHSFRIEARQQGDGYPALVRALNQGLVELAGQIAR 182
>gi|215482945|ref|YP_002325150.1| hypothetical protein ABBFA_001247 [Acinetobacter baumannii
AB307-0294]
gi|213987708|gb|ACJ58007.1| conserved hypothetical protein [Acinetobacter baumannii AB307-0294]
Length = 211
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 27/195 (13%), Positives = 77/195 (39%), Gaps = 25/195 (12%)
Query: 21 LLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK-ILNSEDIIVRSSP 79
+ ++++C P N Y LT K +Q+I P+ L+ ++++ S
Sbjct: 1 MTAIAMTACSSSPTP-NYYTLTP--KVTPVSNSTVQVIEVLPVGIPDRLDRAPLVLQDSN 57
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----YQIISAIRSF 135
+ L +W+ L ++ L A + K+ + + G+ + Y++ + F
Sbjct: 58 GKSTVLDNERWTSTLGTQLRDTLSAGLQQ--KLGAIDSYSSGLSGNNQPLYRVSTDFSHF 115
Query: 136 EINIDRHCAI-ITMSLK------IINAHDNSLVGQK------VFHVEEKLEKD--NKLHF 180
+I + + + ++ +K + + + ++ + ++ +++
Sbjct: 116 DIVDNSNINVAVSWVVKRQIPPTQLESTNPKVISNRGAQLNCRIAFKQPIDQKAKKMEAI 175
Query: 181 IQSLNRAFSRISSEI 195
+ + N A S+I + +
Sbjct: 176 VGASNEAMSQIINTV 190
>gi|109948191|ref|YP_665419.1| hypothetical protein Hac_1724 [Helicobacter acinonychis str.
Sheeba]
gi|109715412|emb|CAK00420.1| conserved hypothetical protein [Helicobacter acinonychis str.
Sheeba]
Length = 223
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 38 IYDLTESTKYDESVQRHI-QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
YDL S+ + + ++ + ++ + N+++I+V++ +I Y +W D
Sbjct: 36 TYDLNASSFEKSQCTKPLAEVWLVSILSADLFNTKEIVVKTQDGQITYKKRQKWIDLPRN 95
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIY-ADYQIISAIRSFEINIDRHCA 144
M++ + E +V P G+ Y + I SF + + + A
Sbjct: 96 MLKTMFMQ--EAEKACLSVALPPYGVGVPTYAVRFTILSFSLLEEGNGA 142
>gi|226330656|ref|ZP_03806174.1| hypothetical protein PROPEN_04576 [Proteus penneri ATCC 35198]
gi|225201451|gb|EEG83805.1| hypothetical protein PROPEN_04576 [Proteus penneri ATCC 35198]
Length = 190
Score = 44.6 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 66/187 (35%), Gaps = 15/187 (8%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLT-------ESTKYDESVQRHIQLIITEPITEKILNS 70
+ + L++C Y L + + Q+ + +L +
Sbjct: 4 IIGIFVLMLTACSSQPE-KTYYQLPDIYQTGVSAQVTTTQSAKKPQIWVQPIRLSSMLVN 62
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ-II 129
I+ +++ I W + L + +Q LI+ + V NQ + + +
Sbjct: 63 AGIVYQTTDINYTVANQHLWINPLDQQLQQNLISGL--TKALPGTVVANQPVEDNLAKLT 120
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ F+ D + +S I +N ++ + F + +D +++L + +
Sbjct: 121 VTVNYFQGRYDGQ---VIISGDWIYTENNKVI-NQPFSLVLPQTEDGYPALVRTLGQGWE 176
Query: 190 RISSEII 196
++ S+I
Sbjct: 177 QVISDIA 183
>gi|330822972|ref|YP_004386275.1| hypothetical protein Alide2_0331 [Alicycliphilus denitrificans
K601]
gi|329308344|gb|AEB82759.1| protein of unknown function DUF330 [Alicycliphilus denitrificans
K601]
Length = 226
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 26/219 (11%), Positives = 63/219 (28%), Gaps = 36/219 (16%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNP---VNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
K ++L + C P ++YD + P+ +L
Sbjct: 14 KGARAVFCMMLAALAAGCSVLPAPPVRADVYDFGPGPMQPAGDAQA-----AVPLAPIVL 68
Query: 69 NSEDIIVRSSPI-------------EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
+ D + +++ ++WS ++ L G+ V
Sbjct: 69 AAVDTVGMPEGSSALLYRLAYANVQQLRPYTQARWSQPPADLLAQALRERL---GQRRMV 125
Query: 116 VKPNQGIYADY-------QIISAIRSFEINIDRHCA---IITMSLKIINA--HDNSLVGQ 163
+ + G + + F A ++ + + +A +L Q
Sbjct: 126 LSGDGGAALQLDQIRQASVLRVQLEEFSQIFSTPDASTGLVRVRAMLADAGPAGEALQAQ 185
Query: 164 KVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+VF + ++L A ++++ E+ W
Sbjct: 186 RVFIARRPAATSDAAGGARALAEAAAQVADELAHWVQQQ 224
>gi|33601007|ref|NP_888567.1| lipoprotein [Bordetella bronchiseptica RB50]
gi|33575442|emb|CAE32520.1| lipoprotein [Bordetella bronchiseptica RB50]
Length = 222
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 64/196 (32%), Gaps = 11/196 (5%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES----VQRHIQLIITEPIT 64
+K + C+ +L+ T L+ C + P Y L + I
Sbjct: 1 MKSTVARCA-PLLIATILAGCG-ASPPARYYTLQPPGATQAVQAGVAPAPFMIEILPVNV 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIY 123
+ ++VR+ + L +WS LP + L G V
Sbjct: 59 PAQADQPQLMVRTGDGTVAPLYSERWSAPLPDEFRAALSDTLTRELGAPDVQVIKPASGT 118
Query: 124 ADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKD-NKLHFI 181
+++ ++ F++ + T ++ +N +LV V+ + + +
Sbjct: 119 PVWRVQVDVQRFDLVAGGPSLLDATWRVRPVNLAAPALVC--RTRVDVPAGGERDTAALV 176
Query: 182 QSLNRAFSRISSEIID 197
Q+ R + ++ I
Sbjct: 177 QAQQRGTALLARTIAS 192
>gi|242278702|ref|YP_002990831.1| hypothetical protein Desal_1229 [Desulfovibrio salexigens DSM 2638]
gi|242121596|gb|ACS79292.1| conserved hypothetical protein [Desulfovibrio salexigens DSM 2638]
Length = 227
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 28/193 (14%), Positives = 62/193 (32%), Gaps = 13/193 (6%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPV---NIYDLTESTKYDESVQRHIQ--LIITEPITEKIL 68
I+ L ++ + + C P Y L + LI+
Sbjct: 14 IAVVLVLIALCAAAGCVKLERPSLDRKYYTLDVLRGDKQKNDIKAVKNLIVRRIKISPRY 73
Query: 69 NSEDIIVRSSPI--EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY 126
D++ + E Y S + + Q + +G + V+ P +
Sbjct: 74 EDRDLVYKVGENVFEADYY-NSYFVPPAALITQDLRV-WMGESGVFANVLGPESLGTGEL 131
Query: 127 QIISAIRSFEINIDRHC--AIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNKLHFIQ 182
+ + S + A++ M ++N D +V + F E+ + ++
Sbjct: 132 LLEGVVNSIYGDYSGPEPKAVVKMQFILLNNSNPDLPIVYSRDFSREKVIGAAGPAALVK 191
Query: 183 SLNRAFSRISSEI 195
+LN + I +E+
Sbjct: 192 ALNEGLTDIFTEL 204
>gi|319761114|ref|YP_004125051.1| hypothetical protein Alide_0386 [Alicycliphilus denitrificans BC]
gi|317115675|gb|ADU98163.1| protein of unknown function DUF330 [Alicycliphilus denitrificans
BC]
Length = 226
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 26/219 (11%), Positives = 63/219 (28%), Gaps = 36/219 (16%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNP---VNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
K ++L + C P ++YD + P+ +L
Sbjct: 14 KGARAVFCMMLAALAAGCSVLPAPPVRADVYDFGPGPMQPAGDAQA-----AVPLAPIVL 68
Query: 69 NSEDIIVRSSPI-------------EIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
+ D + +++ ++WS ++ L G+ V
Sbjct: 69 AAVDTVGMPEGSSALLYRLAYANVQQLRPYTQARWSQPPADLLAQALRERL---GQRRMV 125
Query: 116 VKPNQGIYADY-------QIISAIRSFEINIDRHCA---IITMSLKIINA--HDNSLVGQ 163
+ + G + + F A ++ + + +A +L Q
Sbjct: 126 LSGDGGAALQLDQIRQASVLRVQLEEFSQIFSTPDASTGLVRVRAMLADAGPAGEALQAQ 185
Query: 164 KVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+VF + ++L A ++++ E+ W
Sbjct: 186 RVFIARRPAATPDAAGGARALAEAAAQVADELAHWVQQQ 224
>gi|70731895|ref|YP_261637.1| putative lipoprotein [Pseudomonas fluorescens Pf-5]
gi|68346194|gb|AAY93800.1| lipoprotein, putative [Pseudomonas fluorescens Pf-5]
Length = 194
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 58/181 (32%), Gaps = 13/181 (7%)
Query: 28 SCFFHNNPVNIYDLTESTKYDESVQRHI--QLIITEPITEKILNSEDIIVRSSPIEIQYL 85
+C + P + Y L S R Q ++ ++ ++VR + L
Sbjct: 16 ACS--SAPTHYYTLLPPVAEGSSAARTGGPQFEMSTVRIPVQVDQPQLVVRQDSGTLAIL 73
Query: 86 IGSQWSDKLPRMIQLKLIANFENNGKISTV-VKPNQGIYADYQIISAIRSFEINIDRHCA 144
+WS L L + E + P Q + + +R FE R A
Sbjct: 74 ETQRWSAPLVDEFHDALASQMEQKLGTRNLEGLPKQPGRPVLSLQTDVRRFESLPGR-YA 132
Query: 145 IITMSLKIINAHDNSLVGQKVF--HVEEKLEKDNKLHFIQSLNRAFSRISSEII----DW 198
+I + + + + + +Q+ +A ++++ ++ W
Sbjct: 133 LIDVVWSLRQRGEGGPARSLTCSSQIRQPA-GVELNSLVQAHQQAIAQLAGQVAAAAQRW 191
Query: 199 T 199
T
Sbjct: 192 T 192
>gi|317491497|ref|ZP_07949933.1| hypothetical protein HMPREF0864_00696 [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316921044|gb|EFV42367.1| hypothetical protein HMPREF0864_00696 [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 186
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 66/185 (35%), Gaps = 11/185 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI-----QLIITEPITEKILNSED 72
+ LS+C N Y L T V + QL + L++
Sbjct: 5 MIGAAALLLSACSSQPQ-KNYYQLPVPTATTSVVHAPVESGAHQLWLERVNVADFLSALG 63
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
++ +++ ++ + W+ L + +Q ++AN V G D + +
Sbjct: 64 VVYQTNDVQFVTAGNNLWASPLEQQLQQTMVANLSAAMPGWIVSAQPLGNVQD-TLNINV 122
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F D +S + I + ++ F++ +++D +++L + + + +
Sbjct: 123 TGFHGRYDGKAV---ISGEWILMRSGQ-LTKRAFNLVLPVQQDGYDALVKTLAQGWQQEA 178
Query: 193 SEIID 197
+I
Sbjct: 179 QQIAR 183
>gi|288936257|ref|YP_003440316.1| hypothetical protein Kvar_3404 [Klebsiella variicola At-22]
gi|290510687|ref|ZP_06550057.1| hypothetical protein HMPREF0485_02457 [Klebsiella sp. 1_1_55]
gi|288890966|gb|ADC59284.1| protein of unknown function DUF330 [Klebsiella variicola At-22]
gi|289777403|gb|EFD85401.1| hypothetical protein HMPREF0485_02457 [Klebsiella sp. 1_1_55]
Length = 187
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 68/184 (36%), Gaps = 8/184 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDI 73
L +C ++C Y L +S L + + L +
Sbjct: 4 WLLVAAVCVM-TACSSGGESKTYYQLPVVQGGAQSAASQGARLLWVEQVSIPDYLAGNGV 62
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ +++ ++ + W+ L + ++ L+AN V G D + A+
Sbjct: 63 VYQTTDVQYVIANNNLWASPLDQQLRTTLVANLSQQLPGWVVSSQPLGSEQD-TLNVAVN 121
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H L+ ++ F++ K ++D +++L +A+S+ +
Sbjct: 122 GFHGRYDG---RVIVSGEWLLKHQGQLI-KRPFNIVLKQQQDGYDAMVKTLAQAWSQEAV 177
Query: 194 EIID 197
I
Sbjct: 178 AIAG 181
>gi|290473844|ref|YP_003466718.1| hypothetical protein XBJ1_0783 [Xenorhabdus bovienii SS-2004]
gi|289173151|emb|CBJ79924.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus bovienii SS-2004]
Length = 200
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 44/147 (29%), Gaps = 7/147 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRH----IQ 56
M K ++++ IS + + +S C Y L T + + Q
Sbjct: 1 MKKLMSRLAF--FISVCVFAVSSVFISGCSSSQPQKTYYQLPALTSTSQESRSGVKDERQ 58
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV 116
L + L S I+ ++ + W+ L + ++ LI +
Sbjct: 59 LWVKGVTLADYLASPGIVYQTGDVIYVNASNHLWASPLEQQLKQVLITELSAAFPQRLIA 118
Query: 117 KPNQGIYADYQIISAIRSFEINIDRHC 143
AD + I +F D
Sbjct: 119 GQPLEKNAD-TLDITITAFHGRYDGKV 144
>gi|317182668|dbj|BAJ60452.1| hypothetical protein HPF57_1378 [Helicobacter pylori F57]
Length = 225
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Query: 15 SCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRH-IQLIITEPITEKILNSED 72
S +LA+LL LS P + YDL S+ + I++ + ++ + N+++
Sbjct: 12 SSALALLLQGCLSINLKQMLPEIRTYDLNASSFETTQCPKPLIEVRLISILSADLFNTKE 71
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISA 131
I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 72 IVFKAQDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFT 129
Query: 132 IRSF 135
I SF
Sbjct: 130 ILSF 133
>gi|320353357|ref|YP_004194696.1| hypothetical protein Despr_1240 [Desulfobulbus propionicus DSM
2032]
gi|320121859|gb|ADW17405.1| protein of unknown function DUF330 [Desulfobulbus propionicus DSM
2032]
Length = 199
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 66/189 (34%), Gaps = 6/189 (3%)
Query: 13 IISCSLAVLLCTSLSSCFFHNNPVNIYDL--TESTKYDESVQRHIQLIITEPITEKILNS 70
++ + L SL+ C + V+ Y L T+ ++ + +++ +L +
Sbjct: 7 LLGLAAFGLFLGSLTGCSPVSPQVSYYSLLDTQRPPSVAGARQSLAILVGPVSVPDLLKT 66
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQG-IYADYQI 128
I + Q +W ++ R + G + P + A Q+
Sbjct: 67 SQIA-TGTAERYQLAEQHRWVSQVDRDFARAIGEQLASRLGTERIALYPQDQYLAAPLQV 125
Query: 129 ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ I + E + A +T+ ++ + + E+ + ++ + R
Sbjct: 126 VVDILAMEGTL-GQEARLTVRWSLVATKSKTARLTRRSTFSERPADSSHGAWVAAQRRNI 184
Query: 189 SRISSEIID 197
SR+S EI
Sbjct: 185 SRLSEEIAA 193
>gi|293606223|ref|ZP_06688586.1| lipoprotein [Achromobacter piechaudii ATCC 43553]
gi|292815370|gb|EFF74488.1| lipoprotein [Achromobacter piechaudii ATCC 43553]
Length = 215
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 28/179 (15%), Positives = 64/179 (35%), Gaps = 7/179 (3%)
Query: 32 HNNPVNIYDLT--ESTKYDESVQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQYLIGS 88
+ PV+ Y L + LI +P++ + ++VR+ + L
Sbjct: 24 SSPPVHYYTLQGPAAPSTAAPAGSAGFLIEVQPVSLSTQADQPQLMVRTGDGSVSALYSE 83
Query: 89 QWSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIYADYQIISAIRSFE-INIDRHCAII 146
+WS L ++ L + G + + +++ + ++ FE ++
Sbjct: 84 RWSSPLGDELRGALSDALKGELGALDVQMVKPGPAAPVWRVQTDVQRFEMVSGSMAQLDA 143
Query: 147 TMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
T ++ +NA + + V V EK+ + I + RA ++ + P
Sbjct: 144 TWRVRPVNAKGAGQLCRSV--VTEKVTETGIPALIAAQQRAVVALAGAMASAIRGQTPA 200
>gi|26991589|ref|NP_747014.1| hypothetical protein PP_4911 [Pseudomonas putida KT2440]
gi|24986678|gb|AAN70478.1|AE016689_6 conserved hypothetical protein [Pseudomonas putida KT2440]
gi|313500890|gb|ADR62256.1| Hypothetical protein, conserved [Pseudomonas putida BIRD-1]
Length = 251
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 58/164 (35%), Gaps = 5/164 (3%)
Query: 34 NPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDK 93
PV +Y L S + +++ L E + R + +W+
Sbjct: 40 QPVALYQLDSGDPGQPSQSAGMAVVLGPVSVADYLQRETFLQRQPDGSLSAATDGRWAGS 99
Query: 94 LPRMIQLKLIANFE-NNGKISTVVKPNQ-GIYADYQIISAIRSFEINIDRHCAIITMSLK 151
L I L+ V+ P G D Q++ +I + AI+ +
Sbjct: 100 LSSDIDQLLVRQLAWRLDSQRVVLAPATAGFSPDVQVLLSITRLDS-GKNQPAILDAQWR 158
Query: 152 IINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+++ + ++ H+E++ E +Q+ + +++ ++
Sbjct: 159 LLDRR-GHVRDNRIIHLEQQHEGSE-SSQVQAQGQLLQKLAEQL 200
>gi|33597163|ref|NP_884806.1| lipoprotein [Bordetella parapertussis 12822]
gi|33566614|emb|CAE37872.1| lipoprotein [Bordetella parapertussis]
Length = 222
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 32/196 (16%), Positives = 71/196 (36%), Gaps = 11/196 (5%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTES--TKYDESVQRHIQLIIT-EPITE 65
+K + C+ +L+ T L+ C + P Y L T+ ++ Q +I P+
Sbjct: 1 MKSTVARCA-PLLIATILAGCG-ASPPARYYTLQPPGATQAVQAGVAPAQFMIEILPVNV 58
Query: 66 KI-LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIY 123
+ ++VR+ + L +WS LP + L G V
Sbjct: 59 PAQADQPQLMVRTGDGTVAPLYSERWSAPLPDEFRAALSDTLTRELGAPDVQVIKPASGT 118
Query: 124 ADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKD-NKLHFI 181
+++ ++ F++ + T ++ +N +LV V+ + + +
Sbjct: 119 PVWRVQVDVQRFDLVAGGPSLLDATWRVRPVNLAAPALVC--RTRVDVPAGGERDTAALV 176
Query: 182 QSLNRAFSRISSEIID 197
Q+ R + ++ I
Sbjct: 177 QAQQRGTALLARTIAS 192
>gi|58040552|ref|YP_192516.1| hypothetical protein GOX2124 [Gluconobacter oxydans 621H]
gi|58002966|gb|AAW61860.1| Putative outer membrane protein [Gluconobacter oxydans 621H]
Length = 188
Score = 43.8 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 56/167 (33%), Gaps = 7/167 (4%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ---LIITEPITEKILNS 70
++ S A+L +S C P+ Y L S L ++ L+S
Sbjct: 1 MTRSAALLAFALMSGCAAP--PMQFYTLGAPAIAQNSGTLPASAPVLNVSHVTLPDYLDS 58
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
+DI++R ++ +W +L + + L A+ + V ++
Sbjct: 59 QDILIR-QGDQLDRSPNGRWGSRLSQGVTDLLAAHLGQDWPGYVVTTQPLAETPALRLAV 117
Query: 131 AIRSFEINIDRHCAIITMSLKIINAHDNSLVGQK-VFHVEEKLEKDN 176
I +++ A+ I + + + F + + D+
Sbjct: 118 NISRLDLDSSGQGALTADWALIPSDEHQPIQRSRGSFTAQGTVTTDS 164
>gi|330501587|ref|YP_004378456.1| hypothetical protein MDS_0673 [Pseudomonas mendocina NK-01]
gi|328915873|gb|AEB56704.1| hypothetical protein MDS_0673 [Pseudomonas mendocina NK-01]
Length = 240
Score = 43.8 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 63/173 (36%), Gaps = 6/173 (3%)
Query: 27 SSC-FFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
S C PV +Y L + + +++ L + ++ R + +
Sbjct: 19 SGCSLLQQKPVPLYQLDSGDAVTPTKDNGVTVLVGPISVADYLRQQHLLQRQADGSLVAT 78
Query: 86 IGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQ-GIYADYQIISAIRSFEINIDRHC 143
++W+ L I +++ V+ P G AD Q++ I + +
Sbjct: 79 QDARWASGLANDIDQQMLRQLAWRLDSQRLVLAPAAPGFSADAQVMLTITRLDSGPTQP- 137
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
A++ ++++ L ++ +E+ +++ + R+++E+
Sbjct: 138 AVLEAQWRLLDRR-GQLRDSRLIRLEQPHGGP-LAEQVKAQSTLLQRLAAEMA 188
>gi|291481511|ref|YP_586223.2| hypothetical protein Rmet_4087 [Cupriavidus metallidurans CH34]
gi|288237351|gb|ABF10954.2| conserved exported protein of unknown function [Cupriavidus
metallidurans CH34]
Length = 188
Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 31/185 (16%), Positives = 64/185 (34%), Gaps = 13/185 (7%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL-NSEDIIVRS 77
+V L L+ C Y L + + ++ P+T L + I+ R
Sbjct: 3 SVALIGLLAGCSSPK--SRFYTLDPDNTVERASTATPIRVVVGPVTIPDLVDRPQIVTRV 60
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKL---IANFENNGKISTVVKPNQGIYADYQIISAIRS 134
S E++ ++W++ L I + + + ++ TV +++ I S
Sbjct: 61 SANEVKVNEFARWAEPLKSEISQVIAADLRTMLGSDQV-TVFDTGSNAMPAWRVRVDILS 119
Query: 135 FEINIDRHCAIITMSL--KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
+ ++M I + + V E + D I + NRA + +S
Sbjct: 120 LDSE---PAVAVSMDALWTIQPPGKQPAIAGRSV-VREAVASDGFDAIIAAHNRALASVS 175
Query: 193 SEIID 197
+I
Sbjct: 176 RDIAT 180
>gi|260597350|ref|YP_003209921.1| lipoprotein YmbA [Cronobacter turicensis z3032]
gi|260216527|emb|CBA29724.1| Uncharacterized lipoprotein ymbA [Cronobacter turicensis z3032]
Length = 187
Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 31/181 (17%), Positives = 68/181 (37%), Gaps = 8/181 (4%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTEST-KYDESVQRHIQ--LIITEPITEKILNSEDIIVR 76
L+ +L S Y L ST S + Q L + + L ++ +
Sbjct: 6 PLVAVALLSACSSTEETTWYQLPASTAPVAHSASMNSQHLLWVEQVSVPDYLAGNGVVYQ 65
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
++ ++ + W+ L + ++ L+ N V G D + + F
Sbjct: 66 TTDVQYVIASQNLWASPLDQQLRNTLVTNLSATLPGWVVSAQPLGAEQD-TLNVNVTGFH 124
Query: 137 INIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
D + +S + + H L+ ++ F+ E K ++D +++L +A+ + + I
Sbjct: 125 GRYDG---RVIVSGEWLLKHKGQLI-KRPFYTELKQQEDGYDAMVKTLAQAWQQQAKTIA 180
Query: 197 D 197
D
Sbjct: 181 D 181
>gi|330828284|ref|YP_004391236.1| lipoprotein [Aeromonas veronii B565]
gi|328803420|gb|AEB48619.1| Lipoprotein [Aeromonas veronii B565]
Length = 189
Score = 43.8 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 20/164 (12%), Positives = 60/164 (36%), Gaps = 6/164 (3%)
Query: 36 VNIYDLTESTKYD-ESVQRHIQLIITEPITEKI-LNSEDIIVRSSPIEIQYLIGSQWSDK 93
++ Y L ++ + + ++ P+ L+ ++ + E+ + +W+
Sbjct: 23 LHYYSLDADSQQPVTAPAKPQHQLVLRPVALASQLDRISLVYQLEGQELHFTEYHRWAGA 82
Query: 94 LPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKII 153
L + + + ++ V G + + F+ D A+++ +++
Sbjct: 83 LDDQLNRLTLNGL--STRLPGWVVRQDGARKGPVLTILVERFQGRHDG-SAMLSGRWRLL 139
Query: 154 NAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
A D +++ F E L D + L + + ++ +I
Sbjct: 140 -AEDGTVLRDAPFRQERVLPADGYNALVNELGQGWQQLLDQIAA 182
>gi|121592687|ref|YP_984583.1| putative lipoprotein [Acidovorax sp. JS42]
gi|120604767|gb|ABM40507.1| putative lipoprotein [Acidovorax sp. JS42]
Length = 225
Score = 43.8 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 28/214 (13%), Positives = 66/214 (30%), Gaps = 24/214 (11%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQL---IITEPITE 65
I K I C ++ L S ++YD L + E
Sbjct: 14 ISAKAIFCLASLALVAGCSILPEPPVRADVYDFGPGPLQAPGPAASAPLPPIALAEVTAT 73
Query: 66 KILNSE-----DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
+ + + +++ ++WS ++ + G+ V+ +
Sbjct: 74 GLPEGSTALLYRLAYT-NAQQLRPYTQARWSLPPAVLLHQAVRERL---GQRRAVLSGDD 129
Query: 121 GIYADYQ-------IISAIRSFEINIDRHCA---IITMSLKIINAHDN--SLVGQKVFHV 168
G+ + + + F A ++ + + +A +LV Q+VF
Sbjct: 130 GMAVLLERGRMPSVLRLELEEFSHVFGAPQASAGLVRVRAVLADASTAGETLVAQRVFVA 189
Query: 169 EEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+ ++L A ++++ E+ W S
Sbjct: 190 RRDAATPDAAGGAKALADAAAQVAEELAAWVEQS 223
>gi|330890320|gb|EGH22981.1| putative lipoprotein [Pseudomonas syringae pv. mori str. 301020]
Length = 207
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 57/182 (31%), Gaps = 14/182 (7%)
Query: 33 NNPVNIYDLTESTKYD---ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQ 89
+ + Y L + Q + + ++ ++VR + L +
Sbjct: 21 STQTHYYTLIAPMGAASSVAARPMPFQFEMLPVLMPVQVDQPPLVVRQGNGSLAILDTER 80
Query: 90 WSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITM 148
W L L E + G P + + +R FE + + A+I +
Sbjct: 81 WGSPLGDEFHDALTPQLERHFGSRDMAGLPKNSDQPVLSVRTDVRRFES-MPGNYALIDV 139
Query: 149 SLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRAFSRISSEIID----WT 199
+ + VG K V + + + I + +A SR++ +I WT
Sbjct: 140 VWTLGLRDAGATVGSKRQSLTCSSVIREQAGEGMENLIIAHQKAVSRLADKIAATAASWT 199
Query: 200 LS 201
Sbjct: 200 AQ 201
>gi|160895817|ref|YP_001561399.1| putative lipoprotein [Delftia acidovorans SPH-1]
gi|160361401|gb|ABX33014.1| putative lipoprotein [Delftia acidovorans SPH-1]
Length = 222
Score = 43.8 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 23/192 (11%), Positives = 57/192 (29%), Gaps = 28/192 (14%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL-------TESTKYDESVQRHIQ 56
L++ + A++L S+ YD + + Q
Sbjct: 2 PLSRKTAVASAGLAAALILLAGCSALPQPPAQPARYDFGLAPLSAPAQSATSAAPQARTP 61
Query: 57 LIITEPITEKILNSE-----DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGK 111
L + + + + + + E++ ++WS ++Q +L + G
Sbjct: 62 LALADVEAPALSDGSTAMFYRLAYA-NGQELRPYQLARWSQPPALLLQQRLRSQL---GL 117
Query: 112 ISTVVKPNQGIY-------ADYQIISAIRSFE---INIDRHCAIITMSLKIINAHDN--S 159
V+ ++ + + I F ++ + ++
Sbjct: 118 QRPVLASSESVAQPRLQGAVPTLLRVDIEEFSQVFYAPGSSAGVVRLRATLVEQSGAVDR 177
Query: 160 LVGQKVFHVEEK 171
L+GQK+F V
Sbjct: 178 LLGQKLFEVRSP 189
>gi|28870350|ref|NP_792969.1| lipoprotein [Pseudomonas syringae pv. tomato str. DC3000]
gi|213969826|ref|ZP_03397960.1| lipoprotein [Pseudomonas syringae pv. tomato T1]
gi|301385010|ref|ZP_07233428.1| lipoprotein, putative [Pseudomonas syringae pv. tomato Max13]
gi|302060458|ref|ZP_07251999.1| lipoprotein, putative [Pseudomonas syringae pv. tomato K40]
gi|302133283|ref|ZP_07259273.1| lipoprotein, putative [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|28853597|gb|AAO56664.1| lipoprotein, putative [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925374|gb|EEB58935.1| lipoprotein [Pseudomonas syringae pv. tomato T1]
gi|331016583|gb|EGH96639.1| lipoprotein, putative [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 207
Score = 43.4 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 59/188 (31%), Gaps = 12/188 (6%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDI 73
+ + + +C + + Y L T + Q + I ++ +
Sbjct: 7 LMVLAAALGMGAC--TSTQTHYYTLIAPMGATGSAAARPAPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P G + + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERRFGSRDMAGLPKNGDQPVLSVRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + H A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGHYALIDVVWTLGLRDAGATAGSKRQSLTCSSVIREQAAEGMENLILAHQKA 183
Query: 188 FSRISSEI 195
+ ++ +I
Sbjct: 184 VATLAEKI 191
>gi|256828142|ref|YP_003156870.1| protein of unknown function DUF330 [Desulfomicrobium baculatum DSM
4028]
gi|256577318|gb|ACU88454.1| protein of unknown function DUF330 [Desulfomicrobium baculatum DSM
4028]
Length = 204
Score = 43.4 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 52/180 (28%), Gaps = 13/180 (7%)
Query: 28 SCFFHNNPVNIYDLTESTKYDESVQ---RHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
C P Y L T + I + + I IL I +
Sbjct: 24 GCAGSKTPTVYYSLYAPTLHGAEASMTDGDISVSVGPVIIPDILKQTRIATGGADGSYDL 83
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVV--KPNQGIYADYQIISAIRSFEINIDRH 142
+WS + R + L + V +Q YQ++ + F
Sbjct: 84 TEYHRWSGDVDRDLARALAEHLAQALGTQRVSVFPWDQDFTPTYQVLVDVL-FMGGEPGG 142
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS-------LNRAFSRISSEI 195
AI++ IIN + + E + ++ + L A ++ SEI
Sbjct: 143 EAILSARWNIINKAGKEGSSTRRIDLREVSAGPDVAQWVAAQQLNVEKLGEAIAQTISEI 202
>gi|238919297|ref|YP_002932812.1| hypothetical protein NT01EI_1387 [Edwardsiella ictaluri 93-146]
gi|238868866|gb|ACR68577.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 188
Score = 43.4 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 26/185 (14%), Positives = 70/185 (37%), Gaps = 10/185 (5%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI----QLIITEPITEKILNSED 72
+ +L +LS+C + + Y L ++ SV R + QL + +L
Sbjct: 4 GMILLAVLALSACSVGSQ-KSYYQLPTTSAATTSVSRTVSQGHQLWVQPVSVTDLLGGMG 62
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
++ + + ++ + W+ L + + L+A V + D + I
Sbjct: 63 VVYQQNDVQFVTASNNLWASPLAQQLTQSLVAGLSAGMPGWLVSAQPLEMGQD-TLTVNI 121
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
+F D + ++ + + + ++ QK FH+ + + +++L + + +
Sbjct: 122 NAFYGRYDGK---VVVAGEWLLSRQG-MLTQKTFHIVLPQQGNGYDALVRTLAQGWQQEI 177
Query: 193 SEIID 197
+ +
Sbjct: 178 ASMAG 182
>gi|330991779|ref|ZP_08315729.1| hypothetical protein SXCC_01685 [Gluconacetobacter sp. SXCC-1]
gi|329761247|gb|EGG77741.1| hypothetical protein SXCC_01685 [Gluconacetobacter sp. SXCC-1]
Length = 178
Score = 43.4 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 52/165 (31%), Gaps = 10/165 (6%)
Query: 38 IYDLTESTKYDE---SVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+Y L + Q + + P L+ ++I+ + L G+ WS+ L
Sbjct: 1 MYSLAPIAGTQQVGMGGQVPAVIEVRTPGVPPSLDRQNIVGTQDDYSLTPLAGAAWSEPL 60
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYADYQ--IISAIRSFEINIDRHCAIITMSLKI 152
M+ L + + V N Q + I F + ++ + +
Sbjct: 61 APMLGHVLATDLQQRLPGHGVFAQNDATTVPPQGFVEVEITRFARDASG---VVHLGGSL 117
Query: 153 INAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
+ V L +++ A S+++ ++ D
Sbjct: 118 SVHRVGD--AEHALSVPLALSATPTDSGTRAMVAALSQLTGQVAD 160
>gi|330965857|gb|EGH66117.1| lipoprotein [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 207
Score = 43.4 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 28/190 (14%), Positives = 58/190 (30%), Gaps = 12/190 (6%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYD---ESVQRHIQLIITEPITEKILNSEDI 73
+ + + +C + + Y L + Q + I ++ +
Sbjct: 7 LMVLAAALGMGAC--TSTQTHYYTLIAPMGAASNSAARPAPFQFEMLPVIMPVQVDQPPL 64
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E G P G + + +
Sbjct: 65 VVRQGNGSLAILDTERWGSPLGDEFHDALTPQLEHRFGSRDMAGLPKNGDQPVLSVRTDV 124
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + H A+I + + + G K V + + + I + +A
Sbjct: 125 RRFES-MPGHYALIDVVWTLGLREAGATAGSKRQSLTCSSVIREQAAEGMENLILAHQKA 183
Query: 188 FSRISSEIID 197
S ++ +I
Sbjct: 184 VSTLAEKIAA 193
>gi|296117258|ref|ZP_06835850.1| hypothetical protein GXY_15619 [Gluconacetobacter hansenii ATCC
23769]
gi|295976211|gb|EFG82997.1| hypothetical protein GXY_15619 [Gluconacetobacter hansenii ATCC
23769]
Length = 211
Score = 43.4 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 70/208 (33%), Gaps = 10/208 (4%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L+ + + + L + ++ +Y L T+ Q + +
Sbjct: 1 MTQPLSILPFAPALRRAALALAAATPLLAGCGSSDPTLYSL-APTQGSTVGQAPAVIEVR 59
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENN--GKISTVVKP 118
P L+ + I+ + + + L G+ WS+ L +MI L A+ + G
Sbjct: 60 TPGVPPTLDRDHIVGQQANYSLTTLSGAAWSEPLSQMIGETLTADLQQRLPGSSIFAQNN 119
Query: 119 NQGIYADYQIISAIRSFEINIDRHCAIITMSLKII--NAHDNSLVGQKVFHVEEKLEKDN 176
+ A + + F + + +S + A D + F +
Sbjct: 120 ATSMPAKAFVELDVTQFARDASGQ---VRLSGTLSVHRAGDAQGGTAQAFILTTP-SGGG 175
Query: 177 KLHFIQSLNRAFSRISSEIIDWTLSSLP 204
+ + L++ +++ L +LP
Sbjct: 176 AVAMVAGLSQLLGQVADSAAQ-RLQTLP 202
>gi|220904328|ref|YP_002479640.1| protein of unknown function DUF330 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
gi|219868627|gb|ACL48962.1| protein of unknown function DUF330 [Desulfovibrio desulfuricans
subsp. desulfuricans str. ATCC 27774]
Length = 198
Score = 43.4 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 28/195 (14%), Positives = 73/195 (37%), Gaps = 15/195 (7%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDESVQRHIQLIITEPITEKI 67
+++ + +A ++ + S + P N Y L + T L + +
Sbjct: 1 MQRYALYTLMAFVVLMAACS---RSTPTNYYLLESRLTPVSAESLPGKSLRVAPVTVPEY 57
Query: 68 LNSEDIIVRSSPI-EIQYLIGSQWSDKLP----RMIQLKLIANFENNGKISTVVKPNQGI 122
L+ + I+ R ++ W++ L R+ + L +NG V+
Sbjct: 58 LDRDGIVSRVGESTQLVVAQFHSWAEPLSHGVRRVTREVLTRPMLDNGI--NVLPAGDES 115
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLK-IINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
ADY + ++ + N D+ + ++ + + N ++ + ++ EE + +
Sbjct: 116 TADYVLYLDVQRLDGNFDQKAV---LDVRWTLRSKYNDVLARGIYVDEEDVAGKSYDILT 172
Query: 182 QSLNRAFSRISSEII 196
+ +R R++ +
Sbjct: 173 AAESRMVQRMAEHLT 187
>gi|33593710|ref|NP_881354.1| lipoprotein [Bordetella pertussis Tohama I]
gi|33563783|emb|CAE43025.1| lipoprotein [Bordetella pertussis Tohama I]
Length = 222
Score = 43.4 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 29/196 (14%), Positives = 64/196 (32%), Gaps = 11/196 (5%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTES----TKYDESVQRHIQLIITEPIT 64
+K + C+ +L+ T L+ C + P Y L + I
Sbjct: 1 MKSTVARCA-PLLIATILAGCG-ASPPARYYTLQPPGATQAVQAGVAAAPFMIEILPVNV 58
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIY 123
+ ++VR+ + L +WS LP + L G V
Sbjct: 59 PAQADQPQLMVRTGDGTVAPLYSERWSAPLPDEFRAALSDTLTRELGAPDVQVIKPASGT 118
Query: 124 ADYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKD-NKLHFI 181
+++ ++ F++ + T ++ +N +LV V+ + + +
Sbjct: 119 PVWRVQVDVQRFDLVAGGPSLLDATWRVRPVNLVAPALVC--RTRVDVPAGGERDTAALV 176
Query: 182 QSLNRAFSRISSEIID 197
Q+ R + ++ I
Sbjct: 177 QAQQRGTALLARTIAS 192
>gi|289627428|ref|ZP_06460382.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646131|ref|ZP_06477474.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str. 2250]
gi|298486742|ref|ZP_07004798.1| hypothetical protein PSA3335_2185 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298158609|gb|EFH99673.1| hypothetical protein PSA3335_2185 [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 207
Score = 43.0 bits (100), Expect = 0.022, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 14/182 (7%)
Query: 33 NNPVNIYDLTESTKYD---ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQ 89
+ + Y L + Q + + ++ ++VR + L +
Sbjct: 21 STQTHYYTLIAPMGAASSVAARPMPFQFEMLPVLMPVQVDQPPLVVRQGNGSLAILDTER 80
Query: 90 WSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITM 148
W L L E + G P + + +R FE + + A+I +
Sbjct: 81 WGSPLGDEFHDALTPQLERHFGSRDMAGLPKNSDQPVLSVRTDVRRFES-MPGNYALIDV 139
Query: 149 SLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRAFSRISSEIID----WT 199
+ + G K V + + + I + +A SR++ +I WT
Sbjct: 140 VWTLGLRDAGATAGSKRQSLTCSSVIREQAGEGMENLIIAHQKAVSRLADKIAATAASWT 199
Query: 200 LS 201
Sbjct: 200 AQ 201
>gi|330958335|gb|EGH58595.1| putative lipoprotein [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 207
Score = 43.0 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 58/182 (31%), Gaps = 12/182 (6%)
Query: 25 SLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIE 81
+S+C + + Y L + Q + + ++ ++VR
Sbjct: 15 GISAC--TSTQTHYYTLIAPMGTATTAAASPMPFQFEMLPVLMPVQVDQPPLVVRQGNGS 72
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFE-NNGKISTVVKPNQGIYADYQIISAIRSFEINID 140
+ L +W L L E G P G + + +R FE +
Sbjct: 73 LAILDTERWGSPLGDEFHDALTPQLEHRFGSRDMAGLPKNGEQPVLSVRTDVRRFES-MP 131
Query: 141 RHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ A+I + + + G K V + + + I + +A +R++ +I
Sbjct: 132 GNYALIDVVWTLGLREAGATAGSKRQSLTCSSVIREQAGEGMENLIIAHQKAVARLADKI 191
Query: 196 ID 197
Sbjct: 192 AT 193
>gi|170721754|ref|YP_001749442.1| hypothetical protein PputW619_2579 [Pseudomonas putida W619]
gi|169759757|gb|ACA73073.1| protein of unknown function DUF330 [Pseudomonas putida W619]
Length = 191
Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 16/174 (9%), Positives = 56/174 (32%), Gaps = 16/174 (9%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
++ +L +C ++P+ + LT + +++I ++ +++R
Sbjct: 17 LIALMALGAC--RSDPIQFHTLTPAQPAPSFHTAPDEILIEGVNVPPQVDRPQLVIRQGD 74
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI 139
+ L W L ++ L+ N + + ++ F+ +
Sbjct: 75 SSLAILETQWWGATLVDELRSALVDQLSNTRPARKLS-----------LRVDVQRFDS-V 122
Query: 140 DRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
A++ ++ N+ + + + + + + R+ +
Sbjct: 123 PGQYALLDARWRLRARDANTQLSCR--STLQTAAGSSIDDVVIAQQANVKRLVA 174
>gi|15612421|ref|NP_224074.1| hypothetical protein jhp1356 [Helicobacter pylori J99]
gi|4155968|gb|AAD06932.1| putative [Helicobacter pylori J99]
Length = 225
Score = 43.0 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 15 SCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSED 72
S +LA+LL LS P + YDL S+ + + + + ++ + N+++
Sbjct: 12 SSALALLLQGCLSINLKQMLPEIRTYDLNASSFEMTQCPKPLTEVRLISILSADLFNTKE 71
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISA 131
I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 72 IVFKAQDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFT 129
Query: 132 IRSF 135
I SF
Sbjct: 130 ILSF 133
>gi|300705036|ref|YP_003746639.1| hypothetical protein RCFBP_20873 [Ralstonia solanacearum CFBP2957]
gi|299072700|emb|CBJ44053.1| conserved exported protein of unknown function [Ralstonia
solanacearum CFBP2957]
Length = 218
Score = 43.0 bits (100), Expect = 0.025, Method: Composition-based stats.
Identities = 17/140 (12%), Positives = 50/140 (35%), Gaps = 3/140 (2%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
+ + + + +C ++ L E+ + ++ + L
Sbjct: 7 TRASSLRLACVAGAAALMGACASPEPTLHTLSLRAEPPAPETARIQRAFRLSGVRVPERL 66
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVV--KPNQGIYADY 126
+ I++R+S ++Q L +W+ ++ L A+ + V P G+ Y
Sbjct: 67 DKPQIVLRTSDSQVQELEQQRWAAPFGAELRDALSADLADALSAVDVGGATPPAGV-PLY 125
Query: 127 QIISAIRSFEINIDRHCAII 146
+I + ++ + + + +
Sbjct: 126 RIGADVQRLDARPGQDVSAL 145
>gi|146305635|ref|YP_001186100.1| hypothetical protein Pmen_0600 [Pseudomonas mendocina ymp]
gi|145573836|gb|ABP83368.1| protein of unknown function DUF330 [Pseudomonas mendocina ymp]
Length = 241
Score = 43.0 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 23/173 (13%), Positives = 63/173 (36%), Gaps = 6/173 (3%)
Query: 27 SSC-FFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYL 85
S C PV +Y L + + +++ L + ++ R +
Sbjct: 19 SGCSLLQQKPVPLYQLDSGDAVTPTKDTGMAVLVGPISVADYLRQQHLLQRQPDGSLVAA 78
Query: 86 IGSQWSDKLPRMIQLKLIA--NFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
++W+ L I +++ + + + G AD Q++ I + +
Sbjct: 79 PEARWASGLANDIDQQMLRQLAWRLESQRLALAPAAPGFNADAQVMLTITRLDSGPTQP- 137
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
AI+ ++++ + L ++ +EE +++ + R+++E+
Sbjct: 138 AILEAQWRLLD-RNGQLRDSRLIRMEEAHGGP-LAEQVKAQSALLQRLAAELA 188
>gi|308183562|ref|YP_003927689.1| hypothetical protein HPPC_07155 [Helicobacter pylori PeCan4]
gi|308065747|gb|ADO07639.1| hypothetical protein HPPC_07155 [Helicobacter pylori PeCan4]
Length = 225
Score = 43.0 bits (100), Expect = 0.027, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 15 SCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSED 72
S +LA+LL LS P + YDL S+ + + + + ++ + N+++
Sbjct: 12 SSALALLLHGCLSINLKQMLPEIRTYDLNASSFEIAQCPKPLTEVRLISILSADLFNTKE 71
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISA 131
I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 72 IVFKAKDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFT 129
Query: 132 IRSF 135
I SF
Sbjct: 130 ILSF 133
>gi|242239091|ref|YP_002987272.1| hypothetical protein Dd703_1653 [Dickeya dadantii Ech703]
gi|242131148|gb|ACS85450.1| protein of unknown function DUF330 [Dickeya dadantii Ech703]
Length = 185
Score = 43.0 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 60/168 (35%), Gaps = 9/168 (5%)
Query: 27 SSCFFHNNPVNIYDLTESTKYDE--SVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQY 84
+C N Y L T S QL++ L I+ ++S +
Sbjct: 14 GACSSPQK--NYYQLPAVTASSAVVSKTSGRQLLVAPVTLTDALAGNGIVFQTSDVRYTL 71
Query: 85 LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCA 144
+QW+ L + +QL L+ +G V + + + +F+ D
Sbjct: 72 TTQNQWASPLDQQLQLALLTA-LRSGLPGWDVTTSGAGATPVTLQVNVTAFQGRFDGRA- 129
Query: 145 IITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
I ++ + + F+VE L +D +++L + + ++S
Sbjct: 130 -IVRGEWVLRDKSRVV--TQPFNVEVSLHEDGYDALVKALAQGWQQVS 174
>gi|209515076|ref|ZP_03263945.1| protein of unknown function DUF330 [Burkholderia sp. H160]
gi|209504702|gb|EEA04689.1| protein of unknown function DUF330 [Burkholderia sp. H160]
Length = 199
Score = 42.6 bits (99), Expect = 0.028, Method: Composition-based stats.
Identities = 30/212 (14%), Positives = 64/212 (30%), Gaps = 36/212 (16%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPITEKILN 69
+ +C + V L +C N Y L+ + R I +I +++
Sbjct: 6 ARFTACLMLVFTGALLGACKSPAT--NFYTLSPDGSLSSTGASRPIAAVIGPVTIPAVVD 63
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD---- 125
I+ R+ E+ +W+ L +G I V+ + G +
Sbjct: 64 RPQIVTRTGDNEVAVNEFDRWAQPL--------------DGDIGRVIAADVGALLNSPEV 109
Query: 126 ------------YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLE 173
+ + + F+ R + + + V + E +
Sbjct: 110 SVYDAVRDPSIVWHVRIDVMRFDSVPGRDVTVDVLWA-VRPPGKGRAVTGRSV-AHETVS 167
Query: 174 KDNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
I + +RA + +S +I + S P
Sbjct: 168 GPGIDPLIAAHDRALASVSRDIAA-AVQSHPA 198
>gi|330807213|ref|YP_004351675.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327375321|gb|AEA66671.1| Conserved hypothetical protein; putative exported protein
[Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 234
Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 65/167 (38%), Gaps = 9/167 (5%)
Query: 33 NNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSD 92
N PV++Y L T + + +++ + L E ++ R +Q +W+
Sbjct: 23 NQPVSLYQLDSGTPAQPAQSTGMAVLLGPVLIADYLQRETLLQRQPDGSLQAATDGRWAG 82
Query: 93 KLPRMIQLKLIANFENNGKIST----VVKPNQGIYADYQIISAIRSFEINIDRHCAIITM 148
L I L+ + G + + + QG D Q++ +I + A++
Sbjct: 83 SLSSDIDQLLLR--QVAGHLDSQRVVLAPATQGFTPDVQVLLSITRLDS-GKAQPAVLDA 139
Query: 149 SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
++I+ + ++ H++E+ +Q+ R++ ++
Sbjct: 140 QWRLIDRR-GKVRENRIVHLQEQHAGT-TAAQVQAQGVLLQRLAEQL 184
>gi|162146607|ref|YP_001601066.1| hypothetical protein GDI_0785 [Gluconacetobacter diazotrophicus PAl
5]
gi|209543400|ref|YP_002275629.1| hypothetical protein Gdia_1231 [Gluconacetobacter diazotrophicus
PAl 5]
gi|161785182|emb|CAP54728.1| conserved protein [Gluconacetobacter diazotrophicus PAl 5]
gi|209531077|gb|ACI51014.1| protein of unknown function DUF330 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 202
Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 72/205 (35%), Gaps = 15/205 (7%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI----- 55
M ++ ++ + + + V + L+ C + PV Y L +V I
Sbjct: 1 MTRRNRRMARLALPRLAFLV-VPAFLAGC--ASPPVRFYTLGAPAIATGAVPTGIVTPAT 57
Query: 56 -QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST 114
+ + L+ +DI+VR + +I+ +W+ +L + A
Sbjct: 58 PVVEVARVTLPDYLDGQDIVVR-AGNQIERSATGRWASRLSLGATDLITAQLARGRTDLF 116
Query: 115 VVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKII-NAHDNSLVGQKVFHVEEKLE 173
V Q + A +++ I ++ D A + II + + ++ + +
Sbjct: 117 VTDQPQSLPATWRLAVNISRLDVTRDG-TASLEADWSIIPHDANLPILHSRAAFTQAGAA 175
Query: 174 KDNKLHFIQSLNRA-FSRISSEIID 197
+ L +A +++ I+
Sbjct: 176 ATDGDT--ARLTQAVLEQLAERIVA 198
>gi|317013231|gb|ADU83839.1| hypothetical protein HPLT_07270 [Helicobacter pylori Lithuania75]
Length = 225
Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSE 71
+S +LA LL LS P + YDL S+ + + + + ++ + N++
Sbjct: 11 LSSALAFLLQGCLSINLKQMLPEIRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTK 70
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIIS 130
+I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 71 EIVFKAKDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGTGAPTYAVRF 128
Query: 131 AIRSF 135
I SF
Sbjct: 129 TILSF 133
>gi|260854244|ref|YP_003228135.1| hypothetical protein ECO26_1079 [Escherichia coli O26:H11 str.
11368]
gi|257752893|dbj|BAI24395.1| conserved predicted protein [Escherichia coli O26:H11 str. 11368]
Length = 187
Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ F +E +D ++ L A+S+ ++ I
Sbjct: 124 NGRYDGK--VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASAWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|297380681|gb|ADI35568.1| Hypothetical protein HPV225_1552 [Helicobacter pylori v225d]
Length = 225
Score = 42.6 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 15 SCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSED 72
S +LA+LL LS P + YDL S+ + + + + ++ + N+++
Sbjct: 12 SSALALLLQGCLSINLKQMLPEIRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTKE 71
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISA 131
I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 72 IVFKAKDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFT 129
Query: 132 IRSF 135
I SF
Sbjct: 130 ILSF 133
>gi|330987377|gb|EGH85480.1| putative lipoprotein [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 207
Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 14/182 (7%)
Query: 33 NNPVNIYDLTESTKYD---ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQ 89
+ + Y L + Q + + ++ ++VR + L +
Sbjct: 21 STQTHYYTLIAPMGAASSVAARPMPFQFEMLPVLMPVQVDQPPLVVRQGNGSLAILDTER 80
Query: 90 WSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITM 148
W L L E + G P + + +R FE + + A+I +
Sbjct: 81 WGSPLGDEFHDALTPQLERHFGSRDMAGLPKNSDQPVLSVRTDVRRFES-MPGNYALIDV 139
Query: 149 SLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRAFSRISSEIID----WT 199
+ + G K V + + + I + +A SR++ +I WT
Sbjct: 140 VWTLGLRDAGATAGSKRQSLTCSSVIREQAGEGMENLIIAHQKAVSRLADKIAATAASWT 199
Query: 200 LS 201
Sbjct: 200 AQ 201
>gi|300692381|ref|YP_003753376.1| hypothetical protein RPSI07_2751 [Ralstonia solanacearum PSI07]
gi|299079441|emb|CBJ52116.1| conserved exported protein of unknown function [Ralstonia
solanacearum PSI07]
Length = 209
Score = 42.6 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 19/144 (13%), Positives = 52/144 (36%), Gaps = 5/144 (3%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLI-ITEPI 63
+ + + + + + +C ++ L + +QR +L + P
Sbjct: 2 MMRANRSPSLRLACVAGAAALMGACASPEPTLHTLSLQAAAPEAARIQRAFRLSGVHVP- 60
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
+ L+ I++R+S ++Q L +W+ ++ L A + V
Sbjct: 61 --ERLDKPQIVLRTSDSQVQELEQQRWAAPFGSELRDALSAELADALSAVDVGGATAPAG 118
Query: 124 AD-YQIISAIRSFEINIDRHCAII 146
Y+I + ++ F+ + + +
Sbjct: 119 VPLYRIGADVQRFDARPAQEVSAL 142
>gi|293396733|ref|ZP_06641009.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
gi|291420997|gb|EFE94250.1| conserved hypothetical protein [Serratia odorifera DSM 4582]
Length = 185
Score = 42.6 bits (99), Expect = 0.034, Method: Composition-based stats.
Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 10/170 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTE--STKYDESVQRHIQLIITEPITEKILNSEDII 74
+ V L L +C + P Y L + + QL + L ++
Sbjct: 5 IPVALALLLGACS--STPQKTYYQLPALAAPAQVSATTASRQLWLEHVSVADYLAQNGVV 62
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+++ ++ + W+ L + +Q L+ N N V D + I
Sbjct: 63 YQTNDVQYVIGQNNLWASPLDQQLQQSLVTNLSNALPGWLVSSQPMNSDQDV-LNVTITG 121
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
F D AII + + H + +V ++ F++E ++D +++L
Sbjct: 122 FHGRYDGK-AIIR--GEWVLKHQDRVV-KRPFNLELTQQEDGYDALVRAL 167
>gi|212634309|ref|YP_002310834.1| Curli production assembly/transport component CsgG [Shewanella
piezotolerans WP3]
gi|212555793|gb|ACJ28247.1| Curli production assembly/transport component CsgG, putative
[Shewanella piezotolerans WP3]
Length = 310
Score = 42.6 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 12/119 (10%), Positives = 41/119 (34%), Gaps = 19/119 (15%)
Query: 96 RMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDR----------HCAI 145
M + + + + + + G+ DY I+ ++ F + + A
Sbjct: 91 IMFERLDTEDLNSENILKGIS--DSGVAVDYLIVGSVSEFGRSAESTTGIFSQSKIQKAY 148
Query: 146 ITMSLKIINAHDNSLVGQ--KVFHVEEKLEKDNKLHFIQSLNR-----AFSRISSEIID 197
+++++++ ++ + +K + ++ A S+ S++I
Sbjct: 149 TKVNVRLVDVSTGRIISSVEGAGEASTETKKTLGAGTSAAFDQSLTDKALSQAISQMIS 207
>gi|32266620|ref|NP_860652.1| hypothetical protein HH1121 [Helicobacter hepaticus ATCC 51449]
gi|32262671|gb|AAP77718.1| hypothetical protein HH_1121 [Helicobacter hepaticus ATCC 51449]
Length = 198
Score = 42.3 bits (98), Expect = 0.037, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 53/136 (38%), Gaps = 4/136 (2%)
Query: 64 TEKILNSED-IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
+S I+ S +++ + G +W + M++ KL++ +N ++P
Sbjct: 61 ASTPFDSNSLILFDSKTLQVSEIKGKKWINSPKEMLKFKLLSKLQN-KCFQVSIQPFGTQ 119
Query: 123 YADYQIISAIRSFEINIDRHC--AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
D + ++ S ++ ++ A I++ ++++ + L+ + +
Sbjct: 120 KFDKILKISLLSLQVLNEKGTYSAQISVFYEVMDMKTYIHNKSATLTSKVPLDSISDQNI 179
Query: 181 IQSLNRAFSRISSEII 196
RA + +++
Sbjct: 180 ALGFARASDEVLDKVL 195
>gi|71737007|ref|YP_274408.1| putative lipoprotein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257485189|ref|ZP_05639230.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528]
gi|71557560|gb|AAZ36771.1| lipoprotein, putative [Pseudomonas syringae pv. phaseolicola 1448A]
gi|320324682|gb|EFW80756.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. B076]
gi|320328790|gb|EFW84789.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. race
4]
gi|330880338|gb|EGH14487.1| putative lipoprotein [Pseudomonas syringae pv. glycinea str. race
4]
gi|331010906|gb|EGH90962.1| putative lipoprotein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 207
Score = 42.3 bits (98), Expect = 0.039, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 56/182 (30%), Gaps = 14/182 (7%)
Query: 33 NNPVNIYDLTESTKYD---ESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQ 89
+ + Y L + Q + + ++ ++VR + L +
Sbjct: 21 STQTHYYTLIAPMGAASSVAARPMPFQFEMLPVLMPVQVDQPPLVVRQGNGSLAILDTER 80
Query: 90 WSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITM 148
W L L E + G P + + +R FE + + A+I +
Sbjct: 81 WGSPLGDEFHDALTPQLERHFGSRDMAGLPKNSDQPVLSVRTDVRRFES-MPGNYALIDV 139
Query: 149 SLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRAFSRISSEIID----WT 199
+ + G K V + + + I + +A SR++ +I WT
Sbjct: 140 VWTLGLRDAGATAGSKRQSLTCSSVIREQAGEGMENLIIAHQKAVSRLADKIAATAASWT 199
Query: 200 LS 201
Sbjct: 200 AQ 201
>gi|270156843|ref|ZP_06185500.1| putative lipoprotein [Legionella longbeachae D-4968]
gi|289164716|ref|YP_003454854.1| hypothetical protein LLO_1380 [Legionella longbeachae NSW150]
gi|269988868|gb|EEZ95122.1| putative lipoprotein [Legionella longbeachae D-4968]
gi|288857889|emb|CBJ11744.1| hypothetical protein LLO_1380 [Legionella longbeachae NSW150]
Length = 194
Score = 42.3 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 36/187 (19%), Positives = 76/187 (40%), Gaps = 9/187 (4%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR--HIQLIITEPITEKILNSEDIIVRS 77
++L L +C P Y L + ++ + ++ L I + L +++
Sbjct: 8 IVLGFILVACTRSKEP-QYYLLNPISLPNKQITHYNNLYLGIDDITIPAYLEKPQVMISY 66
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIRSF 135
SP ++ QW+ L + I+ + N + G I N +YQ+ I F
Sbjct: 67 SPNRVELEEYHQWAGTLDKNIKSVISTNLASLLPGAIVETSPWNAKFKPNYQLQIDIEQF 126
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
I++ + + + I H+N++V +K + K+ + I S+N + ++ +I
Sbjct: 127 SIDMQGNSI---LRAEFILYHENNIVKKKDIYYRLKVSNITIENLISSMNNNLTHLTQDI 183
Query: 196 IDWTLSS 202
T+ S
Sbjct: 184 AK-TVRS 189
>gi|253688182|ref|YP_003017372.1| hypothetical protein PC1_1795 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754760|gb|ACT12836.1| protein of unknown function DUF330 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 188
Score = 42.3 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 69/182 (37%), Gaps = 10/182 (5%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ---LIITEPITEKILNSEDIIV 75
++L LS+C + Y L + Q L + L + ++
Sbjct: 6 TLVLALVLSACSSSSTQKTYYQLPIIADTNTVQAAVTQGHPLWVEHVSVADYLVNAGLVY 65
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ-IISAIRS 134
+++ ++ + W+ L + +Q L+ N K+ V Q +D + ++
Sbjct: 66 QTNDVQYVIASNNLWASPLDQQLQQALVTNL--GHKLPGWVVTTQPQGSDQAVLNVSVTG 123
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F D + A++ + + + +V ++ F V +D +++L + + ++S
Sbjct: 124 FHGRYDGN-AVVR--GEWMLTYQGKVV-KRSFSVVLPQTEDGYDALVRTLAQGWQQVSQS 179
Query: 195 II 196
I
Sbjct: 180 IA 181
>gi|88706601|ref|ZP_01104304.1| protein containing DUF330 [Congregibacter litoralis KT71]
gi|88699097|gb|EAQ96213.1| protein containing DUF330 [Congregibacter litoralis KT71]
Length = 218
Score = 42.3 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 73/200 (36%), Gaps = 14/200 (7%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLI--ITEPITEKILNSE 71
+ + VL+ +L C + + L+ + + ++ I P +
Sbjct: 1 MRSLIVVLVILTLQGCAPTSLNIQHLQLSAGNAPMAVGESPVIVLDGIDIPDYLLR---D 57
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQII 129
+++ R S ++Y +W++ L IQ L E+ + + + AD+Q+
Sbjct: 58 ELLYRESEFTVRYDAARRWAEPLDLGIQRVLGRRLESILDTQRVILFPDATARPADWQLR 117
Query: 130 SAIRSFEINIDRHCAIITMSL--KIINAHDNSLVG-QKVFHVEEKLEKDNKLHFIQSLNR 186
I FE ++ ++ + + +S++ V+ L+ + +++++
Sbjct: 118 VTIEEFEAVNG----VVRIAAEGRWEQENGDSIIRESVVYEDTLPLDSTSGDDIAKAMSK 173
Query: 187 AFSRISSEIIDWTLSSLPLS 206
+ E+ P +
Sbjct: 174 LLWTFAEELAAGIAEVAPAA 193
>gi|145589750|ref|YP_001156347.1| hypothetical protein Pnuc_1569 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048156|gb|ABP34783.1| protein of unknown function DUF330 [Polynucleobacter necessarius
subsp. asymbioticus QLW-P1DMWA-1]
Length = 209
Score = 42.3 bits (98), Expect = 0.041, Method: Composition-based stats.
Identities = 27/200 (13%), Positives = 70/200 (35%), Gaps = 31/200 (15%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPITEKILNSEDIIVRSS 78
+L+ L C + Y L SV +++++ ++ ++ +++
Sbjct: 8 LLISLLLWGCTSPKT--SYYKLNAEPIPVMTSVSNKMRIMVGPVSVPARMDRPQLVTQAA 65
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN-------QGIYADYQIISA 131
E++ +W+ L + ++I ++ + PN DYQ++
Sbjct: 66 GSEVEVYEYHRWAGSLKGDV-GRVI----SSNIARNLGAPNVWNFAQSTQAQYDYQVLID 120
Query: 132 IRSFEI------------NIDRHCAIITMSLKIINAH--DNSLVGQKVFHVEEKLEKDNK 177
+++ E I +I + ++G+ + V E +
Sbjct: 121 VQNLESVQDGDVVVDVLWTIKPSAPVIKNQAQSARTKCVPQEIMGRSL--VREPVSGSGF 178
Query: 178 LHFIQSLNRAFSRISSEIID 197
+ + +RAFS++ +I
Sbjct: 179 DALLSAQSRAFSKVGDDIAR 198
>gi|145297580|ref|YP_001140421.1| lipoprotein [Aeromonas salmonicida subsp. salmonicida A449]
gi|142850352|gb|ABO88673.1| lipoprotein [Aeromonas salmonicida subsp. salmonicida A449]
Length = 190
Score = 42.3 bits (98), Expect = 0.042, Method: Composition-based stats.
Identities = 21/182 (11%), Positives = 65/182 (35%), Gaps = 6/182 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTE-STKYDESVQRHIQLIITEPITEKI-LNSEDIIV 75
+ + L L+ C ++ Y L + ++ ++ P+ L+ ++
Sbjct: 7 MTLALLGLLAGCSSAPTVLHYYSLDAEAQPAAAVTEQPQHQLVLRPVALSGQLDRVSLVY 66
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+ E+ + +W+ L + ++ N ++ V G + ++ F
Sbjct: 67 QLEGNELHFAEYHRWAGFLDAQLNQLTLSGLSN--RLPGWVVRQDGARKGPVLSISVERF 124
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ D A+++ +++ + +++ F L D + L + + ++ +I
Sbjct: 125 QGRHDGR-AVLSGRWRLL-TEEGTVLRDVPFQQVRVLPADGYGSLVSELGQGWQQLLDQI 182
Query: 196 ID 197
Sbjct: 183 AA 184
>gi|85059002|ref|YP_454704.1| putative lipoprotein protein [Sodalis glossinidius str.
'morsitans']
gi|84779522|dbj|BAE74299.1| putative lipoprotein protein [Sodalis glossinidius str.
'morsitans']
Length = 222
Score = 42.3 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 59/155 (38%), Gaps = 5/155 (3%)
Query: 42 TESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLK 101
+ + S +L + + L ++ +++ ++ + W+ L + +Q
Sbjct: 63 AATPFHAGSPGVRPKLWVAQVSVADFLVGNGLVYQTNDVQYTTARSNLWASPLEQQLQQT 122
Query: 102 LIANFENNGKISTVVKPNQGIYADY-QIISAIRSFEINIDRHCAIITMSLKIINAHDNSL 160
L+AN + V G D Q+ + F D I + ++ HD +
Sbjct: 123 LVANLSAALPGTLVSTQPIGSGDDNDQLSVTLTGFHGRYDGRA--IVQGVWLL-THDGRV 179
Query: 161 VGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ ++ F + EKD +++L + + + ++
Sbjct: 180 I-RQPFDLALPQEKDGYDALVRTLAQGWDTVGQQV 213
>gi|77459057|ref|YP_348563.1| hypothetical protein Pfl01_2832 [Pseudomonas fluorescens Pf0-1]
gi|77383060|gb|ABA74573.1| lipoprotein putative exported protein [Pseudomonas fluorescens
Pf0-1]
Length = 183
Score = 42.3 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 55/166 (33%), Gaps = 18/166 (10%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSS 78
+ + L +C + P++ + LT + + + ++ I ++ I++R
Sbjct: 9 VLAIGLLLGAC--KSAPISFHTLTPTQPM--AGRAGSEITIEGISVPPQVDRPQIVIRQG 64
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEIN 138
+ L W L ++ L+ N G + ++ F+
Sbjct: 65 NSGLAILETEWWGASLSDELRSALVDQLSNAGGPRKTS-----------VRIDVQRFDSI 113
Query: 139 IDR-HCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
+ + L+ NA D++L+ + + + + +
Sbjct: 114 PGQYGLIDVKWRLRQANAGDDALIACR--SLLQTPSGPTIDDLVAA 157
>gi|322835506|ref|YP_004215532.1| hypothetical protein Rahaq_4826 [Rahnella sp. Y9602]
gi|321170707|gb|ADW76405.1| protein of unknown function DUF330 [Rahnella sp. Y9602]
Length = 193
Score = 42.3 bits (98), Expect = 0.047, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 41/125 (32%), Gaps = 7/125 (5%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDL-TESTKYDES-VQRHIQLIITEPITEKILN 69
++ V L LS C + Y L T + + L + + LN
Sbjct: 2 NVLRVITGVCLLLGLSGCASPA--PHYYTLITPAENAPSAIPPAAFVLRVQPVTVPEQLN 59
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE---NNGKISTVVKPNQGIYADY 126
+++R S EI + W+ LP I+ L A E N I + P
Sbjct: 60 QPQLVIRKSDGEIVISDSALWAAPLPEEIRSALSAQLERSLNTTDIRELTPPPDKPVITL 119
Query: 127 QIISA 131
++
Sbjct: 120 RVTVQ 124
>gi|78357025|ref|YP_388474.1| putative lipoprotein [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219430|gb|ABB38779.1| lipoprotein, putative [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 195
Score = 41.9 bits (97), Expect = 0.048, Method: Composition-based stats.
Identities = 29/190 (15%), Positives = 64/190 (33%), Gaps = 7/190 (3%)
Query: 11 KKIISCSLAVLLCTSL-SSCFFHNNPVNIYDLTESTKYDESVQ--RHIQLIITEPITEKI 67
++ L +L L + C + P Y L+ +V L + +
Sbjct: 5 SGVLRALLCLLFAAGLLTGCAGKSAPTRFYLLSADDVLPAAVPQEARAVLWLEKVEIPPY 64
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
L+ +I+VR I W++ L I L + VV + D +
Sbjct: 65 LDRPNIVVRGDAGRIYLAEFDYWAEPLRDSISRMLARKLAGDTN-RAVVTESYAAGED-R 122
Query: 128 IISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ I + + D + M +++ F +++N ++Q+ +R
Sbjct: 123 VKIVILRLDASTDGDVTMEAMWR--LDSGGADTGEWHYFVNRLSAQQNNYSGYVQAHSRL 180
Query: 188 FSRISSEIID 197
+ ++ +I
Sbjct: 181 LALLAEDIAR 190
>gi|186472382|ref|YP_001859724.1| hypothetical protein Bphy_3534 [Burkholderia phymatum STM815]
gi|184194714|gb|ACC72678.1| protein of unknown function DUF330 [Burkholderia phymatum STM815]
Length = 253
Score = 41.9 bits (97), Expect = 0.051, Method: Composition-based stats.
Identities = 23/138 (16%), Positives = 52/138 (37%), Gaps = 6/138 (4%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDL---TESTKYDESVQRHIQLIITEPITEKIL 68
+ ++ +L + +L++C + P Y L + T + ++ + +
Sbjct: 10 RRVARALMGVGLATLAAC--ASPPTRFYTLGIDAQPTIAVSTASPSFRIDVRPVKVPAAV 67
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQGIYADYQ 127
++V+ + ++Q L +W LP I+ LIA + G + Y+
Sbjct: 68 ARSQLVVQINAAQVQVLEDDRWVSSLPDEIRAALIAGVSQQAGAPAAKTLVPGEDVPVYE 127
Query: 128 IISAIRSFEINIDRHCAI 145
+ I+ FE H +
Sbjct: 128 VTVDIQRFESWPGSHVLV 145
>gi|46581530|ref|YP_012338.1| putative lipoprotein [Desulfovibrio vulgaris str. Hildenborough]
gi|46450952|gb|AAS97598.1| lipoprotein, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|311235177|gb|ADP88031.1| protein of unknown function DUF330 [Desulfovibrio vulgaris RCH1]
Length = 205
Score = 41.9 bits (97), Expect = 0.053, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 10/181 (5%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ---RHIQLIITEPITEK 66
+ ++ +L ++ + S C P Y L S + + + + I
Sbjct: 4 SRTGLAAALVLVCAVASSGCGGAQAPTRYYSLLAEAGQRPSAAPTEKTLSVSVGPVIIPD 63
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWS---DK-LPRMIQLKLIANFENNGKISTVVKPNQGI 122
IL I +WS D+ + R + L V +Q
Sbjct: 64 ILKQTRIATSKGDGSYNLSEYHRWSGDVDRDIARALAEHLGRGLGTEQVF--VFPWDQAG 121
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
Y++++ + S N D A + + ++ + + + EK + ++
Sbjct: 122 APAYRVLADVISMGGNPDG-EATLHVRWTVVPRSGAAEPVTRRTDLSEKCPGPDHADWVA 180
Query: 183 S 183
+
Sbjct: 181 A 181
>gi|317014877|gb|ADU82313.1| hypothetical protein HPGAM_07700 [Helicobacter pylori Gambia94/24]
Length = 225
Score = 41.9 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 15 SCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSED 72
S +LA+LL LS P + YDL S+ + + + + ++ + N+++
Sbjct: 12 SSALALLLQGCLSINLKQMLPEIRTYDLNASSFEMTQCAKPLTEVRLISILSADLFNTKE 71
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISA 131
I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 72 IVFKAQDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFT 129
Query: 132 IRSF 135
I SF
Sbjct: 130 ILSF 133
>gi|120601307|ref|YP_965707.1| hypothetical protein Dvul_0256 [Desulfovibrio vulgaris DP4]
gi|120561536|gb|ABM27280.1| protein of unknown function DUF330 [Desulfovibrio vulgaris DP4]
Length = 205
Score = 41.9 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 57/181 (31%), Gaps = 10/181 (5%)
Query: 10 KKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQ---RHIQLIITEPITEK 66
+ ++ +L ++ + S C P Y L S + + + + I
Sbjct: 4 SRTGLAAALVLVCAVASSGCGGAQAPTRYYSLLAEAGQRPSAAPTEKTLSVSVGPVIIPD 63
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWS---DK-LPRMIQLKLIANFENNGKISTVVKPNQGI 122
IL I +WS D+ + R + L V +Q
Sbjct: 64 ILKQTRIATSKGDGSYNLSEYHRWSGDVDRDIARALAEHLGRGLGTEQVF--VFPWDQAG 121
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
Y++++ + S N D A + + ++ + + + EK + ++
Sbjct: 122 APAYRVLADVISMGGNPDG-EATLHVRWTVVPRSGAAEPVTRRTDLSEKCPGPDHADWVA 180
Query: 183 S 183
+
Sbjct: 181 A 181
>gi|254779975|ref|YP_003058082.1| hypothetical protein HELPY_1435 [Helicobacter pylori B38]
gi|254001888|emb|CAX30138.1| Conserved hypothetical protein; putative signal peptide
[Helicobacter pylori B38]
Length = 225
Score = 41.9 bits (97), Expect = 0.058, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSE 71
+S +LA LL LS P + YDL S+ + + + + ++ + N++
Sbjct: 11 LSSALAFLLQGCLSINLKQMLPEIRTYDLNVSSFEITQCPKPLTEVRLISILSADLFNTK 70
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIIS 130
+I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 71 EIVFKAQDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRF 128
Query: 131 AIRSF 135
I SF
Sbjct: 129 TILSF 133
>gi|99078305|ref|YP_611563.1| hypothetical protein TM1040_3329 [Ruegeria sp. TM1040]
gi|99035443|gb|ABF62301.1| protein of unknown function DUF330 [Ruegeria sp. TM1040]
Length = 185
Score = 41.9 bits (97), Expect = 0.060, Method: Composition-based stats.
Identities = 26/166 (15%), Positives = 64/166 (38%), Gaps = 10/166 (6%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQL-IITEPITEKILNSEDII 74
L++ + +LS+C N+P + T + + R +++ +++ P + I+
Sbjct: 4 LVLSLCVAGALSACSSANDPRYLIAATPAERVKNLSARTVEVQLVSLPSYASASD---IV 60
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQGIYADYQIISAIR 133
+ +QW+D R + + + + G V AD ++ I
Sbjct: 61 SEGDGGALYSQERAQWADDPARGMSVAIARGLSDRTGAAVAVEPWPLNTPADARLDVRI- 119
Query: 134 SFEINIDRHCAIITMSLK-IINAHDNSLVG-QKVFHVEEKLEKDNK 177
+ + R + +S + +++ D + K FH+E + +
Sbjct: 120 --DQSYARADGLFELSGQYAVSSPDGRVREFVKRFHIETPVTESGP 163
>gi|269138617|ref|YP_003295317.1| hypothetical protein ETAE_1263 [Edwardsiella tarda EIB202]
gi|267984277|gb|ACY84106.1| hypothetical protein ETAE_1263 [Edwardsiella tarda EIB202]
gi|304558630|gb|ADM41294.1| putative lipoprotein [Edwardsiella tarda FL6-60]
Length = 188
Score = 41.5 bits (96), Expect = 0.064, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 70/185 (37%), Gaps = 10/185 (5%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLT----ESTKYDESVQRHIQLIITEPITEKILNSED 72
+ +L +LS+C ++ + Y L ++ + QL + +L
Sbjct: 4 GMMLLAVLALSACS-ASDQKSYYQLPTTSAAKASVVQTAPQARQLWVQPVNVTDLLGGMG 62
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAI 132
++ + + ++ + W+ L + + L+A V + D + +
Sbjct: 63 VVYQQNDVQFVTASNNLWASPLAQQLTQSLVAGLSAGMPGWLVSAQPLEMGQD-TLTVNV 121
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
+F D + ++ + + +H +L+ QK FH+ + + +++L + + +
Sbjct: 122 NAFYGRYDGK---VVVAGEWLLSHQGTLM-QKAFHIVLPQQGNGYDALVRTLAQGWQQEI 177
Query: 193 SEIID 197
+ +
Sbjct: 178 ASMAG 182
>gi|108563877|ref|YP_628193.1| hypothetical protein HPAG1_1452 [Helicobacter pylori HPAG1]
gi|107837650|gb|ABF85519.1| hypothetical protein HPAG1_1452 [Helicobacter pylori HPAG1]
Length = 225
Score = 41.5 bits (96), Expect = 0.067, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 5/125 (4%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSE 71
+S +LA+L LS P + YDL S+ + + + + ++ + N++
Sbjct: 11 LSSALALLFQGCLSINLKQMLPEIRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTK 70
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY-ADYQIIS 130
+I+ ++ +I + +W D M++ + E V P G Y +
Sbjct: 71 EIVFKAKDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGTPTYAVRF 128
Query: 131 AIRSF 135
I SF
Sbjct: 129 TILSF 133
>gi|298506722|gb|ADI85445.1| protein of unknown function DUF330 [Geobacter sulfurreducens KN400]
Length = 207
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 33/200 (16%), Positives = 66/200 (33%), Gaps = 20/200 (10%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQ---LIITEPITE 65
+ +L ++C P Y L+ + +E Q ++ P+
Sbjct: 4 RSAGYVALFFYAAIHCAACGGTP-PARFYTLSSLAGSGSEEGRPSAGQQRKVLGIGPVAL 62
Query: 66 KI-LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKI----STVVKPNQ 120
L I RS P + +W L + L+ EN G++ VV P
Sbjct: 63 AGYLYHPGITTRSGPNTVSRAELDRWGSPLGDEVTRVLV---ENMGELLPHGRYVVLPWL 119
Query: 121 GIYA-DYQIISAIRSFEINIDRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKLEKDNK 177
A D ++ I F+ ++ + ++ + N++ + E L
Sbjct: 120 EASALDCRVQLTITRFDGPLEGP---VVLNASWILFGGGANTVRASGEVSITEPLRGSGY 176
Query: 178 LHFIQSLNRAFSRISSEIID 197
+++RA + +S I
Sbjct: 177 GATADAMSRALAGLSRRIAT 196
>gi|323157154|gb|EFZ43277.1| hypothetical protein ECEPECA14_0945 [Escherichia coli EPECa14]
Length = 182
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 29/173 (16%), Positives = 63/173 (36%), Gaps = 7/173 (4%)
Query: 26 LSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L + Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGK- 125
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
+ +S + + H L+ ++ F +E +D ++ L A+S+ ++ I
Sbjct: 126 --VIVSGEWLLNHQGQLI-KRPFRLEGVQTQDGYDEMVKVLASAWSQEAASIA 175
>gi|296533183|ref|ZP_06895810.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
gi|296266491|gb|EFH12489.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
Length = 197
Score = 41.5 bits (96), Expect = 0.077, Method: Composition-based stats.
Identities = 17/152 (11%), Positives = 51/152 (33%), Gaps = 8/152 (5%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
Y LT + + + + + L+ +I + + G++W++ L M+
Sbjct: 34 YRLTARPGPAQGGAAPL-IELRRIGLARYLDRSEITRGGGGARVALVSGARWAEPLGEMV 92
Query: 99 QLKLIANFENNGKISTVVKPNQGIYA--DYQIISAIRSFEINIDRHCAIIT--MSLKIIN 154
N S ++ + A + Q + I E + +I ++ + +
Sbjct: 93 TRITAENLRQRLPGSGILAEGSALTAVPEAQAEAEIARLE-EDEEGRVVIEAQLAARRLG 151
Query: 155 AHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ ++ + L + ++++
Sbjct: 152 GNARPVL--RSLRETVPLAGTDTEALAAAMSQ 181
>gi|222109467|ref|YP_002551731.1| hypothetical protein Dtpsy_0247 [Acidovorax ebreus TPSY]
gi|221728911|gb|ACM31731.1| protein of unknown function DUF330 [Acidovorax ebreus TPSY]
Length = 224
Score = 41.5 bits (96), Expect = 0.078, Method: Composition-based stats.
Identities = 24/212 (11%), Positives = 63/212 (29%), Gaps = 27/212 (12%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNP---VNIYDLTESTKYDESVQRHIQL---IITEPITEKI 67
+ ++ C P ++YD L + E +
Sbjct: 15 VKAIFGFTFMALMAGCSILPEPPVRADVYDFGPGPLQAPGPAASAPLPPIALAEVTATGL 74
Query: 68 LNSE-----DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
+ + +++ ++WS ++ + G+ V+ + G+
Sbjct: 75 PEGSTALLYRLAYT-NAQQLRPYTQARWSLPPAVLLHQAVRERL---GQRRAVLSGDDGM 130
Query: 123 YADYQ-------IISAIRSFEINIDRHCA---IITMSLKIINAHDN--SLVGQKVFHVEE 170
+ + + F A ++ + + +A +LV Q+VF
Sbjct: 131 AVLLERGRMPSVLRLELEEFSHVFGAPQASAGLVRVRAVLADASTAGETLVTQRVFVARR 190
Query: 171 KLEKDNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+ ++L A ++++ E+ W S
Sbjct: 191 DAATPDAAGGAKALADAAAQVAEELAAWVEQS 222
>gi|49082044|gb|AAT50422.1| PA4963 [synthetic construct]
Length = 237
Score = 41.1 bits (95), Expect = 0.086, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 65/185 (35%), Gaps = 8/185 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
L+++ L+ C H P +Y L +++ L + ++
Sbjct: 8 ACLSLVSLLGLTGCAVHP-PAQLYQLDVGAAAVPKKDGGAAVLLGPVQLADYLKRDVMVQ 66
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANF--ENNGKISTVVKPNQGIYADYQIISAIR 133
R + + ++W+ L + +L+ E + G Q++ I
Sbjct: 67 RQADGILSLSTDARWAGNLETNVSQQLLRQMSSELGSSRLALFPEKPGFTPQVQVMLTIS 126
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEK---LEKDNKLHFIQSLNRAFSR 190
+ + A+I ++++ +L +VFH EE+ D L R ++
Sbjct: 127 RLDS-GPKQPAVIEARWRLLDQK-GNLKDSRVFHEEEQHQGSIGDQIRAQSDLLKRLAAQ 184
Query: 191 ISSEI 195
++ ++
Sbjct: 185 LAKDV 189
>gi|317178167|dbj|BAJ55956.1| hypothetical protein HPF16_1359 [Helicobacter pylori F16]
Length = 225
Score = 41.1 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 5/124 (4%)
Query: 15 SCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRH-IQLIITEPITEKILNSED 72
S +LA+LL LS P + YDL S+ + I++ + ++ + N+++
Sbjct: 12 SSALALLLQGCLSINLKQMLPEIRTYDLNASSFEIMQCPKPLIEVRLISILSADLFNTKE 71
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISA 131
I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 72 IVFKAKDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFT 129
Query: 132 IRSF 135
I SF
Sbjct: 130 ILSF 133
>gi|217033906|ref|ZP_03439330.1| hypothetical protein HP9810_870g38 [Helicobacter pylori 98-10]
gi|216943669|gb|EEC23114.1| hypothetical protein HP9810_870g38 [Helicobacter pylori 98-10]
Length = 227
Score = 41.1 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFETTQCPKPLTEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|320181978|gb|EFW56883.1| hypothetical protein SGB_00699 [Shigella boydii ATCC 9905]
gi|332092509|gb|EGI97582.1| hypothetical protein SB521682_1266 [Shigella boydii 5216-82]
Length = 187
Score = 41.1 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L K + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGKQSTASQGNRLLWVEQVTVPDYLAGNGMVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK--VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|315585852|gb|ADU40233.1| conserved hypothetical protein [Helicobacter pylori 35A]
Length = 225
Score = 41.1 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRH-IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + I++ + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFETTQCPKPLIEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|261840137|gb|ACX99902.1| hypothetical protein HPKB_1365 [Helicobacter pylori 52]
Length = 225
Score = 41.1 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRH-IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + I++ + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFETTQCPKPLIEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|261838738|gb|ACX98504.1| hypothetical protein KHP_1314 [Helicobacter pylori 51]
Length = 225
Score = 41.1 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 42/102 (41%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRH-IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + I++ + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFETTQCPKPLIEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|331641481|ref|ZP_08342616.1| paraquat-inducible protein B [Escherichia coli H736]
gi|331038279|gb|EGI10499.1| paraquat-inducible protein B [Escherichia coli H736]
Length = 733
Score = 41.1 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 23/146 (15%), Positives = 49/146 (33%), Gaps = 3/146 (2%)
Query: 2 DKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLII 59
DKK ++ + + + L + L+ C N Y L + Q + L +
Sbjct: 535 DKKRSRAEEGETMKKWLVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWV 594
Query: 60 TEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN 119
+ L ++ ++S ++ + W+ L + ++ L+AN V
Sbjct: 595 EQVTVPDYLAGNGVVYQTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQP 654
Query: 120 QGIYADYQIISAIRSFEINIDRHCAI 145
G D + + F D +
Sbjct: 655 LGSAQD-TLNVTVTEFNGRYDGKVIV 679
>gi|210135630|ref|YP_002302069.1| hypothetical protein HPP12_1441 [Helicobacter pylori P12]
gi|210133598|gb|ACJ08589.1| hypothetical protein HPP12_1441 [Helicobacter pylori P12]
Length = 225
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSE 71
+S +LA LL LS P + YDL S+ + + + + ++ + N++
Sbjct: 11 LSSALAFLLQGCLSINLKQMLPEIRTYDLNASSFEIVQCAKPLTEVRLISILSADLFNTK 70
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIIS 130
+I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 71 EIVFKAQDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRF 128
Query: 131 AIRSF 135
I SF
Sbjct: 129 TILSF 133
>gi|209516509|ref|ZP_03265364.1| protein of unknown function DUF330 [Burkholderia sp. H160]
gi|209503113|gb|EEA03114.1| protein of unknown function DUF330 [Burkholderia sp. H160]
Length = 249
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 34/194 (17%), Positives = 69/194 (35%), Gaps = 17/194 (8%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDL-----TESTKYDESVQRHIQLI-ITEPITE 65
+ + L+ + T L++C Y L + T S I + + P
Sbjct: 10 RAMGGILSAIGLTLLAACASPAT--RFYTLGTDARSTITGSTGSPSFRIDVRPVKVPAAV 67
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQGIYA 124
++V+ S +++ L +W+ LP I LIA + G + G
Sbjct: 68 AR---SQLVVQDSATQVKVLEQDRWASSLPDEIHDALIAGVSQQAGVPAANTVARDGNSP 124
Query: 125 DYQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
Y++ + + FE H I + +++ +A +L V + D +
Sbjct: 125 VYEVDVSFQRFESWPGSHVLIDVVWNVR-TSAGAGTLTCHSVVSEQV---SDGYQAIVDG 180
Query: 184 LNRAFSRISSEIID 197
A S ++ +I +
Sbjct: 181 HRHAISAVAEQIAE 194
>gi|157368614|ref|YP_001476603.1| hypothetical protein Spro_0367 [Serratia proteamaculans 568]
gi|157373086|ref|YP_001481075.1| hypothetical protein Spro_4854 [Serratia proteamaculans 568]
gi|157320378|gb|ABV39475.1| protein of unknown function DUF330 [Serratia proteamaculans 568]
gi|157324850|gb|ABV43947.1| protein of unknown function DUF330 [Serratia proteamaculans 568]
Length = 182
Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 61/170 (35%), Gaps = 10/170 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTESTKYDE--SVQRHIQLIITEPITEKILNSEDII 74
L V L LS+C N P Y L + S QL + L ++
Sbjct: 5 LPVALALLLSACS--NTPQKTYYQLPALGTPAQVNSGASTRQLWLEHVFVADYLMQNGVV 62
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+++ ++ + W+ L + +Q L+ N + V D + I
Sbjct: 63 YQTNGVQYAIAQNNLWASPLDQQLQQTLVTNLSSALPGWVVSSQPMSSDQDV-LNVTISG 121
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
F D A+I + + H + ++ F++E K +D +++L
Sbjct: 122 FHGRFDGK-AVIR--GEWVLNHQGR-LTKRPFNLELKQSEDGYDALVRTL 167
>gi|308185231|ref|YP_003929364.1| hypothetical protein HPSJM_07455 [Helicobacter pylori SJM180]
gi|308061151|gb|ADO03047.1| hypothetical protein HPSJM_07455 [Helicobacter pylori SJM180]
Length = 225
Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 5/125 (4%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSE 71
+S + A+LL LS P + YDL S+ + + + + ++ + N++
Sbjct: 11 LSSAFALLLQGCLSINLKQMLPEIRTYDLNASSFEIMQCPKPLTEVRLISILSADLFNTK 70
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIIS 130
+I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 71 EIVFKAKDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRF 128
Query: 131 AIRSF 135
I SF
Sbjct: 129 TILSF 133
>gi|146311121|ref|YP_001176195.1| hypothetical protein Ent638_1464 [Enterobacter sp. 638]
gi|145317997|gb|ABP60144.1| protein of unknown function DUF330 [Enterobacter sp. 638]
Length = 188
Score = 40.7 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 80/191 (41%), Gaps = 11/191 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST---KYDESVQRHIQLIITEPITEKILNSEDII 74
L ++ L++C ++ + Y L + + Q + L + + + L ++
Sbjct: 5 LFIVGVMVLTACSSGSDNKSYYQLPLAAQTGGQTSTSQGNRLLWVEQVVIPDSLAGNGVV 64
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIS-TVVKPNQGIYADYQIISAIR 133
++S ++ + W+ L + ++ L+AN N+ V G D + +
Sbjct: 65 YQTSDVQYVIANNNLWASPLDQQLRNTLVANL-NSQLPGWIVASQPLGSNQD-TLNVTVT 122
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H L+ ++ F++E K ++D ++ L + +++ S+
Sbjct: 123 GFHGRYDGK---VIISGEWLLNHQGQLI-KRPFYLELKQQQDGYDEMVKMLAQGWAQESA 178
Query: 194 EIIDWTLSSLP 204
I +S LP
Sbjct: 179 SIAK-EISRLP 188
>gi|84687031|ref|ZP_01014914.1| lipoprotein, putative [Maritimibacter alkaliphilus HTCC2654]
gi|84665005|gb|EAQ11486.1| lipoprotein, putative [Rhodobacterales bacterium HTCC2654]
Length = 186
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 62/182 (34%), Gaps = 5/182 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
L + L++C N P + D + ++ + L + + +I+V
Sbjct: 4 LLPFVLVLLAACG-SNGPRYLLDRAPVDEAAKTRVKAGTLEVMDVSLPTYAEDAEIMVED 62
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEI 137
+ + + W+D R I L+ +T +P + + Q +R E+
Sbjct: 63 GNGALSPVKNALWADDPGRAITQLLVDQIGRTSTATTAAEP-WPLESPPQAAVHVRVSEM 121
Query: 138 NIDRHCAIITMSLKIINAHDNSLVGQKV--FHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ + + + +V +++ F V L + + A +S+ I
Sbjct: 122 VASASGSF-DLRGQFAISSYGYVVRERIEPFAVSVPLADTKPGTIAAASSAALRELSAVI 180
Query: 196 ID 197
+
Sbjct: 181 VR 182
>gi|253687836|ref|YP_003017026.1| hypothetical protein PC1_1444 [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251754414|gb|ACT12490.1| protein of unknown function DUF330 [Pectobacterium carotovorum
subsp. carotovorum PC1]
Length = 208
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/135 (14%), Positives = 46/135 (34%), Gaps = 7/135 (5%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDI 73
++ L++ + SLS+C + S + + + + L++ +
Sbjct: 4 VTLLLSLAVIASLSACSSPPVRYHTLLAPASPTATTAHSVPFFIDVLPVGVPEQLDTSQL 63
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQ----LKLIANFENNGKISTVVKPNQGIYADYQII 129
++R L +W L I+ L+ +S +++P +I
Sbjct: 64 VIRQGDSGAVVLDNERWLSPLGEEIRTALSANLVQRLHTQD-VSGLMRPTGIPV--VRIH 120
Query: 130 SAIRSFEINIDRHCA 144
+R F+ + A
Sbjct: 121 LQVRRFDSWPGQSVA 135
>gi|317181146|dbj|BAJ58932.1| hypothetical protein HPF32_1350 [Helicobacter pylori F32]
Length = 225
Score = 40.7 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 5/124 (4%)
Query: 15 SCSLAVLLCTSLSSCFFHNNP-VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSED 72
S +LA+LL LS P + YDL S+ + + + + ++ + N+++
Sbjct: 12 SSALALLLQGCLSINLKQMLPEIRTYDLNASSFEITQCHKPLTEVRLISILSADLFNTKE 71
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISA 131
I+ ++ +I + +W D M++ + E V P G A Y +
Sbjct: 72 IVFKAKDGQITHGKHQKWIDLPRNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFT 129
Query: 132 IRSF 135
I SF
Sbjct: 130 ILSF 133
>gi|311280146|ref|YP_003942377.1| hypothetical protein Entcl_2845 [Enterobacter cloacae SCF1]
gi|308749341|gb|ADO49093.1| protein of unknown function DUF330 [Enterobacter cloacae SCF1]
Length = 188
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 32/191 (16%), Positives = 76/191 (39%), Gaps = 8/191 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--LIITEPITEKILNSEDI 73
V+ C + ++ Y L + +S L + + L +
Sbjct: 4 WLPVVVACLLSACSSSGSDSKTYYQLPLAQAGAQSSASQNSHLLWVEQVSIPDYLAGNGV 63
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIR 133
+ ++S ++ + W+ L + ++ L+AN N V G D + ++
Sbjct: 64 VYQTSDVQYVIATNNLWASPLDQQLRTTLVANLSNQLPGWVVASQPLGSDQD-TLNVSVS 122
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + +S + + H L+ ++ FH+E K +D +++L +A+S+ ++
Sbjct: 123 GFHGRYDG---RVIVSGEWLLKHQGQLI-KRPFHIELKQPQDGYDAMVKTLAQAWSQEAA 178
Query: 194 EIIDWTLSSLP 204
+ +++ LP
Sbjct: 179 AMAQ-SINRLP 188
>gi|54293185|ref|YP_125600.1| hypothetical protein lpl0231 [Legionella pneumophila str. Lens]
gi|53753017|emb|CAH14460.1| hypothetical protein lpl0231 [Legionella pneumophila str. Lens]
Length = 241
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 39/198 (19%), Positives = 77/198 (38%), Gaps = 16/198 (8%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR--HIQLIITEPITEK 66
++KK + L + + +L C Y LT + S H+Q+ + E
Sbjct: 45 LRKKPVKFLLILFIALTLCDCGRSKE-TQFYLLTPISPQKNSRNSYNHLQIGVDEVSIPD 103
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG----I 122
+ +++ +P + +QW+ L + I L L N + + VV
Sbjct: 104 YMKKPQLMIHQTPHHLTLEEFNQWAGALDKNITLVLTTNL--STLMPGVVVQTSPWNNKF 161
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLV--GQKVFHVEEKLEKDNKLHF 180
+ DY + I FEI+I + T+ + L+ G +H++ L +
Sbjct: 162 HPDYHLQVMISQFEIDIHGNS---TLRAEYFIYRKEELIYKGNAYYHIKVPL--ISIETL 216
Query: 181 IQSLNRAFSRISSEIIDW 198
+QS+N + ++ EI +
Sbjct: 217 VQSMNTNLTHLTEEIARF 234
>gi|157369990|ref|YP_001477979.1| hypothetical protein Spro_1747 [Serratia proteamaculans 568]
gi|157321754|gb|ABV40851.1| protein of unknown function DUF330 [Serratia proteamaculans 568]
Length = 185
Score = 40.7 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 31/183 (16%), Positives = 65/183 (35%), Gaps = 10/183 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTE--STKYDESVQRHIQLIITEPITEKILNSEDII 74
+ V L LS+C + P Y L S QL + L ++
Sbjct: 5 IPVALALLLSACS--STPQKTYYQLPALGSPAQVSGSTTSRQLWLEHVSVADYLAQSGVV 62
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+++ ++ + W+ L + +Q L+ N + V D + I
Sbjct: 63 YQTNDVQYVIAQNNLWASPLDQQLQQTLVTNLSSALPGWVVSSQPMSSEQDV-LNVTISG 121
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F D AII + + + + ++ F +E K +D +++L + + + + +
Sbjct: 122 FHGRFDGK-AIIRGEWVLNHQGN---LTKRPFSLELKQGEDGYDALVRTLAQGWQQEAQD 177
Query: 195 IID 197
I
Sbjct: 178 IAA 180
>gi|15600156|ref|NP_253650.1| hypothetical protein PA4963 [Pseudomonas aeruginosa PAO1]
gi|9951245|gb|AAG08348.1|AE004909_4 hypothetical protein PA4963 [Pseudomonas aeruginosa PAO1]
Length = 236
Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 64/185 (34%), Gaps = 8/185 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
L+++ L+ C H P +Y L +++ L + ++
Sbjct: 8 ACLSLVSLLGLTGCAVHP-PAQLYQLDVGAAAVPKKDGGAAVLLGPVQLADYLKRDVMVQ 66
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANF--ENNGKISTVVKPNQGIYADYQIISAIR 133
R + + ++W+ L + +L+ E + G Q++ I
Sbjct: 67 RQADGILSLSTDARWAGNLETNVSQQLLRQMSSELGSSRLALFPEKPGFTPQVQVMLTIS 126
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEK---LEKDNKLHFIQSLNRAFSR 190
+ + A+I ++++ L +VFH EE+ D L R ++
Sbjct: 127 RLDS-GPKQPAVIEARWRLLDQK-GDLKDSRVFHEEEQHQGSIGDQIRAQSDLLKRLAAQ 184
Query: 191 ISSEI 195
++ ++
Sbjct: 185 LAKDV 189
>gi|300921008|ref|ZP_07137395.1| conserved hypothetical protein [Escherichia coli MS 115-1]
gi|300411999|gb|EFJ95309.1| conserved hypothetical protein [Escherichia coli MS 115-1]
Length = 187
Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQGGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK--VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|271501398|ref|YP_003334423.1| hypothetical protein Dd586_2883 [Dickeya dadantii Ech586]
gi|270344953|gb|ACZ77718.1| protein of unknown function DUF330 [Dickeya dadantii Ech586]
Length = 201
Score = 40.3 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 34/199 (17%), Positives = 73/199 (36%), Gaps = 23/199 (11%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPVNI---YDLTESTKYDESVQRHIQLIITEPITEKILNS 70
+ SL + + + L+ C + + YD + S L + P L+S
Sbjct: 3 VVLSLILGVTSVLAGCSSPHVRYHTLVSYD-SVSHMVTPPEFVIDLLPVGVP---AQLDS 58
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD----- 125
+ ++VR S + L +W L +Q L + +++TV G+ D
Sbjct: 59 QQVVVRQSNSRMVVLDDDRWLSPLGDELQTAL--SLGMTQQLNTV--DVAGLARDNRKPV 114
Query: 126 YQIISAIRSFEINIDRHCAI-ITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL 184
+++ +R F+ ++ SL I N + + ++ + + + +
Sbjct: 115 VRVLIQVRRFDNWPGNAVSLYAEWSLSIQQEGKNRRLVCRS-NITQPVAG-DPAQIFSAG 172
Query: 185 NRAFSRISSEI----IDWT 199
+ R+S +I DW
Sbjct: 173 QQVVKRLSIQIGQVATDWV 191
>gi|116053112|ref|YP_793431.1| hypothetical protein PA14_65590 [Pseudomonas aeruginosa UCBPP-PA14]
gi|296391803|ref|ZP_06881278.1| hypothetical protein PaerPAb_26779 [Pseudomonas aeruginosa PAb1]
gi|115588333|gb|ABJ14348.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 236
Score = 40.3 bits (93), Expect = 0.16, Method: Composition-based stats.
Identities = 27/185 (14%), Positives = 64/185 (34%), Gaps = 8/185 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
L+++ L+ C H P +Y L +++ L + ++
Sbjct: 8 ACLSLVSLLGLTGCAVHP-PAQLYQLDVGAAAVPKKDGGAAVLLGPVQLADYLKRDVMVQ 66
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANF--ENNGKISTVVKPNQGIYADYQIISAIR 133
R + + ++W+ L + +L+ E + G Q++ I
Sbjct: 67 RQADGILSLSTDARWAGNLETNVSQQLLRQMSSELGSSRLALFPEKPGFTPQVQVMLTIS 126
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEK---LEKDNKLHFIQSLNRAFSR 190
+ + A+I ++++ L +VFH EE+ D L R ++
Sbjct: 127 RLDS-GPKQPAVIEARWRLLDQK-GDLKDSRVFHEEERHQGSIGDQIRAQSDLLKRLAAQ 184
Query: 191 ISSEI 195
++ ++
Sbjct: 185 LAKDV 189
>gi|270264503|ref|ZP_06192769.1| putative lipoprotein [Serratia odorifera 4Rx13]
gi|270041639|gb|EFA14737.1| putative lipoprotein [Serratia odorifera 4Rx13]
Length = 197
Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 30/161 (18%), Positives = 53/161 (32%), Gaps = 9/161 (5%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI-LNSEDI 73
S ++L SL++C + V+ + L VQ LI P+ ++ +
Sbjct: 5 SRLCFLMLMVSLTACSSPS--VHYHTLVAPAADPPPVQPAPFLIAVLPVGIPPQIDLSQL 62
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQGIYADYQIISAI 132
+VR L +W L I+ L A + G G +I I
Sbjct: 63 VVRQGQSGALVLENERWLSPLGDEIRTALSAELAQRLGTQDVAGLAKAGESTTVRIQLEI 122
Query: 133 RSFEINIDRHCAIITMSLKI-INAHDNSLV-GQKVFHVEEK 171
R F+ R + + +N LV ++ +
Sbjct: 123 RRFDAWPGR---AVELDAGWSLNVQGRRLVCRSRLTQAVQP 160
>gi|315123361|ref|YP_004065367.1| hypothetical protein PSM_B0421 [Pseudoalteromonas sp. SM9913]
gi|315017121|gb|ADT70458.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
Length = 202
Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 56/188 (29%), Gaps = 12/188 (6%)
Query: 15 SCSLAVLLCTSLSSCFFH-NNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSE 71
+ L + +S C + Y + QL + LN+
Sbjct: 3 ALFLLLTGVIFISGCSSAIQTTIQYYQFEQPINDSSRNVQDTQAQLRVQTVTLRGALNNR 62
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMI----QLKLIANFENNGKIST-VVKPNQGIYADY 126
I ++ +I W + M+ Q L N I V +Q Y
Sbjct: 63 GIAMKVDSNQIHAANYHLWGESPDVMLSASAQQTLFNTMTNWMVIKGLPVITDQQQQTFY 122
Query: 127 QIISAIRSFEINIDRHCAIITMSLKIIN---AHDNSLVGQKVFHVEEKLEKDNKLHFIQS 183
++ + F ++ + A I+ ++ L+ F + D + +
Sbjct: 123 ELEYELHHFNGDLQGN-ADISGLWRLYYTHPESGRRLLSIHNFSSVMPINDDGYDSLVAT 181
Query: 184 LNRAFSRI 191
L + + +I
Sbjct: 182 LEKMWQQI 189
>gi|318606227|emb|CBY27725.1| putative lipoprotein protein YPO1422 [Yersinia enterocolitica
subsp. palearctica Y11]
Length = 183
Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 9/134 (6%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTE--STKYDESVQRHIQLIITEPITEKILNSEDII 74
+AV+ LS+C + P Y L + S QL + L + ++
Sbjct: 5 MAVIAALLLSACS--STPSKTYYQLPALSAPAGATSSVASRQLWVEHVSVADYLAAAGVV 62
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-QIISAIR 133
+++ ++ + W+ L + +Q L+ N N + + +Q + +D + +
Sbjct: 63 YQTNDVQYVIASNNLWASPLDQQLQQTLVTNLSNA--LPGWLVSSQPLDSDQDVLNITVT 120
Query: 134 SFEINIDRHCAIIT 147
F D AII
Sbjct: 121 GFHGRYDGR-AIIR 133
>gi|194435233|ref|ZP_03067458.1| putative lipoprotein [Shigella dysenteriae 1012]
gi|194416522|gb|EDX32666.1| putative lipoprotein [Shigella dysenteriae 1012]
gi|332095906|gb|EGJ00913.1| hypothetical protein SD15574_1297 [Shigella dysenteriae 155-74]
Length = 187
Score = 40.3 bits (93), Expect = 0.17, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L K + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGKQSTASQGNRLLWVEQVTVPDYLAGNGMVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-MLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D + +S + + H L+ ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK---VIVSGEWLLNHQGQLI-KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|117618513|ref|YP_858242.1| hypothetical protein AHA_3794 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117559920|gb|ABK36868.1| conserved hypothetical protein [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 189
Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 21/175 (12%), Positives = 60/175 (34%), Gaps = 6/175 (3%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIVRSSPIEI 82
L+ C ++ Y L + + Q QL++ L+ ++ + E+
Sbjct: 13 LLAGCSSAPTQLHYYSLDAEAQQPAAVVAQPQHQLVLKPVSLSGQLDRMSLVYQLEGKEL 72
Query: 83 QYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRH 142
+ +W+ L + + + ++ V G + ++ F+ D
Sbjct: 73 HFAEYHRWAGSLDAQLDQLTLNGL--SSRLPGWVVRQDGARKGPVLTISVERFQGRHDGR 130
Query: 143 CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
A+++ +++ + +++ F L D + L + ++ +I
Sbjct: 131 -AVLSGRWRLL-TEEGTVLRDVPFQQVRVLPADGYGTLVSELGAGWQQLLDQIAA 183
>gi|114771205|ref|ZP_01448625.1| metallopeptidase, family M24 [alpha proteobacterium HTCC2255]
gi|114548130|gb|EAU51017.1| metallopeptidase, family M24 [alpha proteobacterium HTCC2255]
Length = 379
Score = 40.3 bits (93), Expect = 0.18, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 54/158 (34%), Gaps = 21/158 (13%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + + +S + +++ +LS+ P Y T++ +S R LI+
Sbjct: 2 MQRGFLDKEFQNRVSLAQGLMVKNNLSALLLTTEPDVRYFTGFLTQFWQSPARPWFLIV- 60
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDK-----LPRMIQL---KLIANFE---NN 109
P + K I V S L+ S W D P M+ LI +
Sbjct: 61 -PASGKP-----IAVIPSIG--YSLMNSTWIDDIRTWLAPNMVDDGIGLLIDTLNEVAKD 112
Query: 110 GKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIIT 147
G+I + Y + + E++I I+
Sbjct: 113 GRIGIPDGLESHVRMPYADMKKLSE-EVDISSDYGIVR 149
>gi|50085793|ref|YP_047303.1| hypothetical protein ACIAD2734 [Acinetobacter sp. ADP1]
gi|49531769|emb|CAG69481.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
Length = 217
Score = 39.9 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 30/208 (14%), Positives = 71/208 (34%), Gaps = 32/208 (15%)
Query: 21 LLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI--QLIITEPITEKILNSEDIIVRSS 78
+L LS+C P N Y LT S + L + P L+ ++++ +
Sbjct: 1 MLPVLLSACSGSPTP-NYYSLTPQVMPLASSSVRVIEVLPVGLPD---RLSRSPLVIQET 56
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA---DYQIISAIRSF 135
+ + L +W+ ++ L A + K+ V + + G+ Y+I + F
Sbjct: 57 NGQSKVLDNERWTSTFDAELRDGLSAGLQQ--KLGAVDRYSSGMTGGKVSYRIATDFSRF 114
Query: 136 EI--NIDRHCAIITMSLKIINAHDNSLVG-------------QK------VFHVEEKLEK 174
+I + I +++ I D+ + F +
Sbjct: 115 DIVKQAESGNLNIDVAVAWIIKRDDPAKALTLPANASQAADWSRQLSCRLAFQQKVSKGG 174
Query: 175 DNKLHFIQSLNRAFSRISSEIIDWTLSS 202
+++ + A +++ + ++S
Sbjct: 175 HETREIVRASSLALNQVVEAVSASVIAS 202
>gi|90023426|ref|YP_529253.1| hypothetical protein Sde_3786 [Saccharophagus degradans 2-40]
gi|89953026|gb|ABD83041.1| Curli production assembly/transport component CsgG [Saccharophagus
degradans 2-40]
Length = 321
Score = 39.9 bits (92), Expect = 0.18, Method: Composition-based stats.
Identities = 35/181 (19%), Positives = 56/181 (30%), Gaps = 36/181 (19%)
Query: 12 KIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
KI++ L V L S +S V E QR Q + E K L +
Sbjct: 2 KIVTTGLMVALLCSCASQDPRLKDVE-------PTISEQQQREAQAKLLEAQATKTLALK 54
Query: 72 D-IIVRSSPIEIQY---LIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN-------- 119
I V E Y L+GS +D L + + + N+G +P+
Sbjct: 55 RKIAVGRLSNETSYGKSLLGSSKNDVLGEKVSDMFVQSLANSGNYLIFERPDLELLENEA 114
Query: 120 -------QGIYADYQIISAIRSFEINIDR----------HCAIITMSLKIINAHDNSLVG 162
I D +I ++ F N A T+ L+++ +
Sbjct: 115 RLTGETVNLIGVDTLVIGSLTQFGRNTTGESGFLSSSKKQEATATVDLRLVETKTGRVFA 174
Query: 163 Q 163
Sbjct: 175 S 175
>gi|89092165|ref|ZP_01165120.1| hypothetical protein MED92_08356 [Oceanospirillum sp. MED92]
gi|89083900|gb|EAR63117.1| hypothetical protein MED92_08356 [Oceanospirillum sp. MED92]
Length = 194
Score = 39.9 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 21/159 (13%), Positives = 61/159 (38%), Gaps = 7/159 (4%)
Query: 39 YDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMI 98
Y L+ ++ + ++ +N+ I + + I+ W+++ P +
Sbjct: 31 YLLSSDSQSYTKSDTRSVIGVSPVNVAAYINTPGIALLTKENHIRIANHHLWAEQ-PDLA 89
Query: 99 QLKLIAN-FENNGKISTVVKPNQGIYAD--YQIISAIRSFEINIDRHCAIITMSLKIINA 155
+++ + + S V G +D Y I + I F A+++ + N
Sbjct: 90 ISRVLHSELDALLPHSRVDSGELGRQSDWQYTITTQIDQFHGTASG-EAVLSGFWQFKNE 148
Query: 156 HDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
++ + F++++ + K + SL ++++ +
Sbjct: 149 --QRVLVTQRFNMKQPIGKPGYAPLVDSLRELLTQLAEQ 185
>gi|307638116|gb|ADN80566.1| hypothetical protein hp908_1445 [Helicobacter pylori 908]
gi|325996716|gb|ADZ52121.1| hypothetical protein hp2018_1399 [Helicobacter pylori 2018]
gi|325998310|gb|ADZ50518.1| hypothetical protein hp2017_1397 [Helicobacter pylori 2017]
Length = 225
Score = 39.9 bits (92), Expect = 0.21, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEMTQCPKPLTEVRLISILSADLFNTKEIVFKAQDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|297569474|ref|YP_003690818.1| protein of unknown function DUF330 [Desulfurivibrio alkaliphilus
AHT2]
gi|296925389|gb|ADH86199.1| protein of unknown function DUF330 [Desulfurivibrio alkaliphilus
AHT2]
Length = 228
Score = 39.9 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 65/199 (32%), Gaps = 30/199 (15%)
Query: 27 SSCFFHNNPVNI---YDLTESTKYDESVQRHIQLIITEPITEKILNS--------EDIIV 75
S C P Y+L DE + +++ P E ++ S +
Sbjct: 15 SGCGLVAEPPPAPAYYELRLPLPQDEPLANTVRVGQAGPRVEVLVPSWLRSRTMQYRLAY 74
Query: 76 RSSP-IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI------------ 122
R + + S+W + MI L F N G+++ +G
Sbjct: 75 RDDGELRRREYRESRWVAEPGEMIARSLERYFAN-GRLTAEGDRPEGAEWPEPQALAAGL 133
Query: 123 ---YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLH 179
+ ++ F+ D H ++ + ++I+ + ++ F ++ +
Sbjct: 134 ELCRLRLTLDEFVQIFQTASDSHT-LLEVRAELISPA-GTAASRRKFAFRQQAPSPDAFG 191
Query: 180 FIQSLNRAFSRISSEIIDW 198
+ + R +++ + W
Sbjct: 192 GVVAHRRGLQQLAEALQGW 210
>gi|148261076|ref|YP_001235203.1| hypothetical protein Acry_2085 [Acidiphilium cryptum JF-5]
gi|146402757|gb|ABQ31284.1| protein of unknown function DUF330 [Acidiphilium cryptum JF-5]
Length = 184
Score = 39.9 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 51/184 (27%), Gaps = 11/184 (5%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
+LA+ L L+ C IY T R + + + ++ +
Sbjct: 6 ATLAMALTLGLAGCAGQRT---IYLALSPTSGPTFHTRGAAIAVAHVLMPPTIDRIYLTT 62
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI-YADYQIISAIRS 134
+ P ++W+ L Q L + V P + A + +
Sbjct: 63 ATGPNTRAVSRRARWTAPLAGQAQAILARDLARRLPERRVAMPGDPVPRAALLVHVEVTD 122
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ---SLNRAFSRI 191
F H + ++ V + E+ +L R RI
Sbjct: 123 F----IPHPGHVELAADWRGVRAGKAVAAGRVRIAERCGGGAAAEAHAMSVALGRLADRI 178
Query: 192 SSEI 195
++ +
Sbjct: 179 AARL 182
>gi|217031802|ref|ZP_03437305.1| hypothetical protein HPB128_199g10 [Helicobacter pylori B128]
gi|298735568|ref|YP_003728089.1| hypothetical protein HPB8_68 [Helicobacter pylori B8]
gi|216946454|gb|EEC25056.1| hypothetical protein HPB128_199g10 [Helicobacter pylori B128]
gi|298354753|emb|CBI65625.1| conserved hypothetical protein [Helicobacter pylori B8]
Length = 225
Score = 39.9 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTKEIVFKAQDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|329119773|ref|ZP_08248450.1| lipoprotein [Neisseria bacilliformis ATCC BAA-1200]
gi|327464118|gb|EGF10426.1| lipoprotein [Neisseria bacilliformis ATCC BAA-1200]
Length = 176
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 21/168 (12%), Positives = 54/168 (32%), Gaps = 18/168 (10%)
Query: 33 NNPVNIYDLTE-----STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIG 87
+ P + L + + +++++ EP+ L + +++ +
Sbjct: 19 SPPAAYFTLPDSRFQMPEHTQGKSETAVRVVLAEPLNRGGL-----AYQPDALQLNHARS 73
Query: 88 SQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIIT 147
W+ L + + F G P A + + +F+
Sbjct: 74 HLWAQPLDQAAAARFANEFNRAGDARRYFVPAHQSSAAQSLTVYLEAFQGTYKGST---- 129
Query: 148 MSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
++ + S G + F E D +QSL++ S ++++
Sbjct: 130 ----VVEGYVRSDAGSRRFRAETPQRGDGYEAMLQSLSQGVSAAAAQV 173
>gi|281178076|dbj|BAI54406.1| conserved hypothetical protein [Escherichia coli SE15]
Length = 187
Score = 39.6 bits (91), Expect = 0.24, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ F +E +D ++ L R +S+ ++ I
Sbjct: 124 NGRYDGK--VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLARVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|322832268|ref|YP_004212295.1| hypothetical protein Rahaq_1546 [Rahnella sp. Y9602]
gi|321167469|gb|ADW73168.1| protein of unknown function DUF330 [Rahnella sp. Y9602]
Length = 188
Score = 39.6 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 65/188 (34%), Gaps = 15/188 (7%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDE------SVQRHIQLIITEPITEKILNSE 71
+ V+L L++C ++ Y L + + L + L
Sbjct: 5 IPVVLALFLTACS-SSDQKTYYQLPVLSSTVTTGSVMSAGAVQRHLWVERVSVADYLAGS 63
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
++ +++ ++ + W+ L + +Q L+ + S V +
Sbjct: 64 GLVYQTNDVQYTLTQNNLWASPLDQQLQQALVTYLRRDLPGSLVSTQAANTDDQDVLNVN 123
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSL----NRA 187
+ F D I+ +S + ++ Q+ F + K +D +++L +
Sbjct: 124 VTGFHGRYDG---IVIVSGSWSLTRNGQMI-QRDFTLNLKQNEDGYDALVRTLATGWQQE 179
Query: 188 FSRISSEI 195
+I+++I
Sbjct: 180 AGQIAAQI 187
>gi|209918204|ref|YP_002292288.1| hypothetical protein ECSE_1013 [Escherichia coli SE11]
gi|260867124|ref|YP_003233526.1| hypothetical protein ECO111_1020 [Escherichia coli O111:H- str.
11128]
gi|293409330|ref|ZP_06652906.1| conserved hypothetical protein [Escherichia coli B354]
gi|293433249|ref|ZP_06661677.1| lipoprotein ymbA [Escherichia coli B088]
gi|301023080|ref|ZP_07186887.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|307311661|ref|ZP_07591301.1| protein of unknown function DUF330 [Escherichia coli W]
gi|309795058|ref|ZP_07689478.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|209911463|dbj|BAG76537.1| conserved hypothetical protein [Escherichia coli SE11]
gi|257763480|dbj|BAI34975.1| conserved predicted protein [Escherichia coli O111:H- str. 11128]
gi|291324068|gb|EFE63490.1| lipoprotein ymbA [Escherichia coli B088]
gi|291469798|gb|EFF12282.1| conserved hypothetical protein [Escherichia coli B354]
gi|300397201|gb|EFJ80739.1| conserved hypothetical protein [Escherichia coli MS 69-1]
gi|306908216|gb|EFN38715.1| protein of unknown function DUF330 [Escherichia coli W]
gi|308121362|gb|EFO58624.1| conserved hypothetical protein [Escherichia coli MS 145-7]
gi|315060237|gb|ADT74564.1| conserved hypothetical protein [Escherichia coli W]
gi|323175420|gb|EFZ61015.1| hypothetical protein ECOK1180_5704 [Escherichia coli 1180]
gi|323379203|gb|ADX51471.1| protein of unknown function DUF330 [Escherichia coli KO11]
gi|324019036|gb|EGB88255.1| hypothetical protein HMPREF9542_02231 [Escherichia coli MS 117-3]
gi|324117183|gb|EGC11091.1| hypothetical protein ERBG_02898 [Escherichia coli E1167]
Length = 187
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D + +S + + H L+ ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK---VIVSGEWLLNHQGQLI-KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|308064222|gb|ADO06109.1| hypothetical protein HPSAT_07035 [Helicobacter pylori Sat464]
Length = 225
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|308062727|gb|ADO04615.1| hypothetical protein HPCU_07375 [Helicobacter pylori Cuz20]
Length = 225
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|188528235|ref|YP_001910922.1| hypothetical protein HPSH_07495 [Helicobacter pylori Shi470]
gi|188144475|gb|ACD48892.1| hypothetical protein HPSH_07495 [Helicobacter pylori Shi470]
Length = 225
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|300902885|ref|ZP_07120830.1| hypothetical protein HMPREF9536_01030 [Escherichia coli MS 84-1]
gi|301302432|ref|ZP_07208563.1| hypothetical protein HMPREF9347_01009 [Escherichia coli MS 124-1]
gi|300405027|gb|EFJ88565.1| hypothetical protein HMPREF9536_01030 [Escherichia coli MS 84-1]
gi|300842271|gb|EFK70031.1| hypothetical protein HMPREF9347_01009 [Escherichia coli MS 124-1]
gi|315258000|gb|EFU37968.1| putative lipoprotein [Escherichia coli MS 85-1]
Length = 187
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIATLWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|167585311|ref|ZP_02377699.1| ABC-type uncharacterized transport system auxiliary component-like
protein [Burkholderia ubonensis Bu]
Length = 109
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 13/105 (12%), Positives = 37/105 (35%), Gaps = 4/105 (3%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M + L + ++ + + L + + YDL + + + L +
Sbjct: 6 MSRTLARTLRPAAAALAALTLALAAGCASENAALSNARYDLGPAGPVATAGRGP-ALKVL 64
Query: 61 EPITEKILNSEDIIVRS---SPIEIQYLIGSQWSDKLPRMIQLKL 102
+ + L+S+ + R + S+W+ +++ +L
Sbjct: 65 DVAAPEALDSDKFVYRLAYADAQRMAVYRDSRWTAPPAQLLTQRL 109
>gi|300722569|ref|YP_003711859.1| hypothetical protein XNC1_1598 [Xenorhabdus nematophila ATCC 19061]
gi|297629076|emb|CBJ89661.1| conserved hypothetical protein; putative exported protein
[Xenorhabdus nematophila ATCC 19061]
Length = 208
Score = 39.6 bits (91), Expect = 0.28, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 69/208 (33%), Gaps = 19/208 (9%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI----- 55
M K + K+ S S V+ +S C Y L S + +
Sbjct: 1 MKKLILKLAF--FTSVSAFVIGSVFISGCSSSQPQKTYYQLPVLPGKPASQGKSVSLEGK 58
Query: 56 -------QLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFEN 108
QL + L + I+ ++ + W+ L + +Q LI+
Sbjct: 59 LGAKHEPQLWVKSVNLSDYLAASGIVYQTGDVSYINASNHLWASPLQQQLQQLLISELSA 118
Query: 109 NGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHV 168
V A + I +F D I I++ DN + ++ F++
Sbjct: 119 AFPHRLVSGQELEKEA-VALDITITAFHGRYDGQVLIAGYW--ILSNSDNVI--KRPFNI 173
Query: 169 EEKLEKDNKLHFIQSLNRAFSRISSEII 196
E K +KD + +L + +S++ I
Sbjct: 174 ELKQQKDGYAELVLTLAKGYSQLVQSIA 201
>gi|238749736|ref|ZP_04611241.1| Uncharacterized lipoprotein ymbA [Yersinia rohdei ATCC 43380]
gi|238712391|gb|EEQ04604.1| Uncharacterized lipoprotein ymbA [Yersinia rohdei ATCC 43380]
Length = 182
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 49/132 (37%), Gaps = 8/132 (6%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTESTKYDESVQ--RHIQLIITEPITEKILNSEDII 74
+AV+ LS+C + P Y L + + QL I L + ++
Sbjct: 1 MAVIAALLLSACS--SEPSKTYYQLPALSAPATASSSIASRQLWIEHVGVADYLAAAGVV 58
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-QIISAIR 133
+++ ++ + W+ L + +Q L+ N N + + +Q + +D + +
Sbjct: 59 YQTNDVQYVIASNNLWASPLDQQLQQTLVTNLSNA--LPGWLVSSQPLDSDQDVLNVTVT 116
Query: 134 SFEINIDRHCAI 145
F D +
Sbjct: 117 GFHGRYDGRAIV 128
>gi|121603102|ref|YP_980431.1| putative lipoprotein [Polaromonas naphthalenivorans CJ2]
gi|120592071|gb|ABM35510.1| putative lipoprotein [Polaromonas naphthalenivorans CJ2]
Length = 234
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 27/208 (12%), Positives = 68/208 (32%), Gaps = 26/208 (12%)
Query: 20 VLLCTSLSSCFFHNNP--VNIYD-----LTESTKYDESVQRHIQLIITEPITEKILNSED 72
+ ++ C + P +YD L + I + L+++
Sbjct: 30 IFALGLVAGCSVVDKPTRAALYDFGPGELPTQAAATPAPALPPLAIADIATSGGALDNQA 89
Query: 73 IIVRSS---PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD---- 125
++ R +++ ++WS ++++ +L G+ V +G+ +
Sbjct: 90 VLYRLGYLDAQQLRPYSQARWSMPPAQLLRQRLRER---LGQQRAVFNAREGVALNRSQN 146
Query: 126 ---YQIISAIRSFEINIDRHCA---IITMSLKIINA--HDNSLVGQKVFHVEEKLEKDNK 177
+ + F A +I + ++ LV Q+ V+ + +
Sbjct: 147 ANLLMLRLELEEFSQLFSAPDASVGLIRLHATLVEITPAGERLVAQRNLSVQRPATRADA 206
Query: 178 LHFIQSLNRAFSRISSEIIDWTLSSLPL 205
+++L A E+ W L +P
Sbjct: 207 AGGVRALTAATDAAIDELDQW-LRQMPA 233
>gi|332162174|ref|YP_004298751.1| putative lipoprotein [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325666404|gb|ADZ43048.1| putative lipoprotein protein [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860153|emb|CBX70474.1| uncharacterized lipoprotein ymbA [Yersinia enterocolitica W22703]
Length = 183
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 9/134 (6%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTE--STKYDESVQRHIQLIITEPITEKILNSEDII 74
+AV+ LS+C + P Y L + S QL + L + ++
Sbjct: 5 MAVIAALLLSACS--SIPSKTYYQLPALSAPAGATSSVASRQLWVEHVSVADYLAAAGVV 62
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-QIISAIR 133
+++ ++ + W+ L + +Q L+ N N + + +Q + +D + +
Sbjct: 63 YQTNDVQYVIASNNLWASPLDQQLQQTLVTNLSNA--LPGWLVSSQPLDSDQDVLNITVT 120
Query: 134 SFEINIDRHCAIIT 147
F D AII
Sbjct: 121 GFHGRYDGR-AIIR 133
>gi|193064667|ref|ZP_03045746.1| putative lipoprotein [Escherichia coli E22]
gi|260843201|ref|YP_003220979.1| hypothetical protein ECO103_0998 [Escherichia coli O103:H2 str.
12009]
gi|192927724|gb|EDV82339.1| putative lipoprotein [Escherichia coli E22]
gi|257758348|dbj|BAI29845.1| conserved predicted protein [Escherichia coli O103:H2 str. 12009]
gi|323159583|gb|EFZ45563.1| hypothetical protein ECE128010_4199 [Escherichia coli E128010]
Length = 187
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQITVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|24112365|ref|NP_706875.1| hypothetical protein SF0953 [Shigella flexneri 2a str. 301]
gi|30062489|ref|NP_836660.1| hypothetical protein S1018 [Shigella flexneri 2a str. 2457T]
gi|110804968|ref|YP_688488.1| hypothetical protein SFV_0961 [Shigella flexneri 5 str. 8401]
gi|145698237|ref|NP_415472.2| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|157156583|ref|YP_001462185.1| hypothetical protein EcE24377A_1067 [Escherichia coli E24377A]
gi|157160473|ref|YP_001457791.1| hypothetical protein EcHS_A1061 [Escherichia coli HS]
gi|170020647|ref|YP_001725601.1| hypothetical protein EcolC_2644 [Escherichia coli ATCC 8739]
gi|170080610|ref|YP_001729930.1| hypothetical protein ECDH10B_1022 [Escherichia coli str. K-12
substr. DH10B]
gi|188491869|ref|ZP_02999139.1| putative lipoprotein [Escherichia coli 53638]
gi|193071862|ref|ZP_03052741.1| putative lipoprotein [Escherichia coli E110019]
gi|238900210|ref|YP_002926006.1| hypothetical protein BWG_0804 [Escherichia coli BW2952]
gi|253774019|ref|YP_003036850.1| hypothetical protein ECBD_2643 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|256023346|ref|ZP_05437211.1| hypothetical protein E4_08229 [Escherichia sp. 4_1_40B]
gi|293414232|ref|ZP_06656881.1| hypothetical protein ECDG_00785 [Escherichia coli B185]
gi|297520185|ref|ZP_06938571.1| putative lipoprotein [Escherichia coli OP50]
gi|300819195|ref|ZP_07099396.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300925367|ref|ZP_07141253.1| hypothetical protein HMPREF9548_03446 [Escherichia coli MS 182-1]
gi|300929651|ref|ZP_07145112.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300949678|ref|ZP_07163660.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300955394|ref|ZP_07167770.1| hypothetical protein HMPREF9547_01281 [Escherichia coli MS 175-1]
gi|301022474|ref|ZP_07186353.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|301327220|ref|ZP_07220480.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301643475|ref|ZP_07243523.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|307137582|ref|ZP_07496938.1| putative lipoprotein [Escherichia coli H736]
gi|312971085|ref|ZP_07785264.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|331651974|ref|ZP_08352993.1| putative lipoprotein [Escherichia coli M718]
gi|150387816|sp|P0AB10|YMBA_ECOLI RecName: Full=Uncharacterized lipoprotein ymbA; Flags: Precursor
gi|150387817|sp|P0AB11|YMBA_SHIFL RecName: Full=Uncharacterized lipoprotein ymbA; Flags: Precursor
gi|24051232|gb|AAN42582.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|30040735|gb|AAP16466.1| hypothetical protein S1018 [Shigella flexneri 2a str. 2457T]
gi|110614516|gb|ABF03183.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|145693109|gb|AAC74038.2| conserved protein [Escherichia coli str. K-12 substr. MG1655]
gi|157066153|gb|ABV05408.1| putative lipoprotein [Escherichia coli HS]
gi|157078613|gb|ABV18321.1| putative lipoprotein [Escherichia coli E24377A]
gi|169755575|gb|ACA78274.1| protein of unknown function DUF330 [Escherichia coli ATCC 8739]
gi|169888445|gb|ACB02152.1| conserved protein [Escherichia coli str. K-12 substr. DH10B]
gi|188487068|gb|EDU62171.1| putative lipoprotein [Escherichia coli 53638]
gi|192954824|gb|EDV85348.1| putative lipoprotein [Escherichia coli E110019]
gi|238860456|gb|ACR62454.1| conserved protein [Escherichia coli BW2952]
gi|253325063|gb|ACT29665.1| protein of unknown function DUF330 [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|260449902|gb|ACX40324.1| protein of unknown function DUF330 [Escherichia coli DH1]
gi|281600314|gb|ADA73298.1| putative lipoprotein [Shigella flexneri 2002017]
gi|291434290|gb|EFF07263.1| hypothetical protein ECDG_00785 [Escherichia coli B185]
gi|299881237|gb|EFI89448.1| conserved hypothetical protein [Escherichia coli MS 196-1]
gi|300317683|gb|EFJ67467.1| hypothetical protein HMPREF9547_01281 [Escherichia coli MS 175-1]
gi|300418496|gb|EFK01807.1| hypothetical protein HMPREF9548_03446 [Escherichia coli MS 182-1]
gi|300450918|gb|EFK14538.1| conserved hypothetical protein [Escherichia coli MS 116-1]
gi|300462428|gb|EFK25921.1| conserved hypothetical protein [Escherichia coli MS 187-1]
gi|300528214|gb|EFK49276.1| conserved hypothetical protein [Escherichia coli MS 107-1]
gi|300846171|gb|EFK73931.1| conserved hypothetical protein [Escherichia coli MS 78-1]
gi|301078189|gb|EFK92995.1| conserved hypothetical protein [Escherichia coli MS 146-1]
gi|310336846|gb|EFQ02013.1| conserved hypothetical protein [Escherichia coli 1827-70]
gi|313650800|gb|EFS15201.1| hypothetical protein SF2457T_0803 [Shigella flexneri 2a str. 2457T]
gi|315135600|dbj|BAJ42759.1| hypothetical protein ECDH1ME8569_0903 [Escherichia coli DH1]
gi|315619149|gb|EFU99729.1| conserved hypothetical protein [Escherichia coli 3431]
gi|323938058|gb|EGB34320.1| hypothetical protein ERCG_00784 [Escherichia coli E1520]
gi|323942868|gb|EGB39033.1| hypothetical protein ERDG_00736 [Escherichia coli E482]
gi|323962839|gb|EGB58414.1| hypothetical protein ERGG_00694 [Escherichia coli H489]
gi|323973171|gb|EGB68363.1| hypothetical protein ERHG_00830 [Escherichia coli TA007]
gi|331050252|gb|EGI22310.1| putative lipoprotein [Escherichia coli M718]
Length = 187
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|330866702|gb|EGH01411.1| putative lipoprotein [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 143
Score = 39.2 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 45/138 (32%), Gaps = 11/138 (7%)
Query: 74 IVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENN-GKISTVVKPNQGIYADYQIISAI 132
+VR + L +W L L E + G P + + +
Sbjct: 1 MVRQGNGSLAILDTERWGSPLGDEFHDALTPQLERHFGSRDMAGLPKNSDQPVLSVRTDV 60
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKV-----FHVEEKLEKDNKLHFIQSLNRA 187
R FE + + A+I + + + G K V + + + I + +A
Sbjct: 61 RRFES-MPGNYALIDVVWTLGLRDAGATAGSKRQSLTCSSVIREQAGEGMENLIIAHQKA 119
Query: 188 FSRISSEIID----WTLS 201
SR+S +I WT
Sbjct: 120 VSRLSDKIAATAASWTAQ 137
>gi|326404478|ref|YP_004284560.1| hypothetical protein ACMV_23310 [Acidiphilium multivorum AIU301]
gi|325051340|dbj|BAJ81678.1| hypothetical protein ACMV_23310 [Acidiphilium multivorum AIU301]
Length = 184
Score = 39.2 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 51/184 (27%), Gaps = 11/184 (5%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV 75
+LA+ L L+ C IY T R + + + ++ +
Sbjct: 6 ATLAMALTLGLAGCAGQRT---IYLALSPTSGPTFHTRGAAIAVAHVLMPPTIDRIYLTT 62
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI-YADYQIISAIRS 134
+ P ++W+ L Q L + V P + A + +
Sbjct: 63 ATGPNTRAVSRRARWTAPLAGQAQAILARDLARRLPERRVAMPGDPVPRAALLVHVEVTE 122
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ---SLNRAFSRI 191
F H + ++ V + E+ +L R RI
Sbjct: 123 F----MPHPGHVELAADWRGVRAGKAVAAGRVRIAERCGGGAAAEAHAMSVALGRLADRI 178
Query: 192 SSEI 195
++ +
Sbjct: 179 AARL 182
>gi|92114131|ref|YP_574059.1| hypothetical protein Csal_2009 [Chromohalobacter salexigens DSM
3043]
gi|91797221|gb|ABE59360.1| protein of unknown function DUF330 [Chromohalobacter salexigens DSM
3043]
Length = 221
Score = 39.2 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 66/182 (36%), Gaps = 11/182 (6%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYDESVQR------HIQLIITEPITEKILNSEDIIVRSS 78
SL+ C Y L + D+ + ++ L+ + I+++
Sbjct: 30 SLAGCATQGTEDTRYTLPDDPLSDDRAAAEAVGDFDGSVWLSPLSLTSYLDDQGIVMQLD 89
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-QIISAIR--SF 135
I I W++ L + +L + +++ Q A + +R F
Sbjct: 90 DIRIHQARHHLWAEPLDSQLMRQLRERLSTALPEADILRRGQTAQAASPALHVDLRVERF 149
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ D A++ +I +A D + ++ F +E L+ D +++L A+ + +
Sbjct: 150 QGRDDG-MAVVGGDWRIRDAQD-RTLSRESFAIERPLDSDGYPALVRALGGAWDTLGERL 207
Query: 196 ID 197
+
Sbjct: 208 AE 209
>gi|170682434|ref|YP_001744217.1| putative lipoprotein [Escherichia coli SMS-3-5]
gi|170520152|gb|ACB18330.1| putative lipoprotein [Escherichia coli SMS-3-5]
Length = 187
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 63/181 (34%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQGGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK--VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|17545319|ref|NP_518721.1| hypothetical protein RSc0600 [Ralstonia solanacearum GMI1000]
gi|17427611|emb|CAD14130.1| hypothetical protein of unknown function duf330 [Ralstonia
solanacearum GMI1000]
Length = 211
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 16/143 (11%), Positives = 50/143 (34%), Gaps = 1/143 (0%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
+ + + + + + +C ++ L + E+ + ++
Sbjct: 2 MMRANRSSFLRLAGMAGAAALMGACASPEPTLHTLSLRAAAPAPEAARIQRAFRLSGVRV 61
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+ L+ I++R+S ++Q L +W+ ++ L A + V
Sbjct: 62 PERLDKPQIVLRTSDSQVQELEQQRWAAPFGSELRDALSAGLADALAAVDVGGATAPAGV 121
Query: 125 D-YQIISAIRSFEINIDRHCAII 146
Y+I + ++ F+ + + +
Sbjct: 122 PLYRISTDVQRFDARPAQDVSAL 144
>gi|114047607|ref|YP_738157.1| hypothetical protein Shewmr7_2112 [Shewanella sp. MR-7]
gi|113889049|gb|ABI43100.1| protein of unknown function DUF330 [Shewanella sp. MR-7]
Length = 197
Score = 39.2 bits (90), Expect = 0.37, Method: Composition-based stats.
Identities = 23/195 (11%), Positives = 68/195 (34%), Gaps = 29/195 (14%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTESTKYDESVQRHIQ-----LIITEPITEKILNSE 71
L + + ++ C P + L +T L + LN+
Sbjct: 4 LVLFIVFLMAGCSSQPTPKTYFIALQHTTDPGLISPTMGSGSLCTLAVNRVNLADYLNTN 63
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
++ ++SP E+ W+ L IQ +L + ++ + A + + +
Sbjct: 64 GLLYQTSPQELVVARQHLWAGSLAEQIQFRL----------NNLLSQPCSVPATWTLSTD 113
Query: 132 -----------IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ F + A++ ++++ ++ ++ F L ++
Sbjct: 114 EPTKLGQLDLTVTEFYGSYTG-EAVVGGQWRLMD-KMQQVLLEQPFQYRIALPEEGYTAL 171
Query: 181 IQSLNRAFSRISSEI 195
+ S+++ +++++I
Sbjct: 172 VSSMDKGLIQLAADI 186
>gi|320176234|gb|EFW51295.1| hypothetical protein SDB_01207 [Shigella dysenteriae CDC 74-1112]
Length = 187
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNILVANLSTQLPGWVVASQPLGSVQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|187730231|ref|YP_001880851.1| putative lipoprotein [Shigella boydii CDC 3083-94]
gi|187427223|gb|ACD06497.1| putative lipoprotein [Shigella boydii CDC 3083-94]
gi|320187163|gb|EFW61864.1| hypothetical protein SGF_00593 [Shigella flexneri CDC 796-83]
gi|332093418|gb|EGI98476.1| hypothetical protein SB359474_2635 [Shigella boydii 3594-74]
Length = 187
Score = 38.8 bits (89), Expect = 0.42, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSVQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|186894867|ref|YP_001871979.1| hypothetical protein YPTS_1550 [Yersinia pseudotuberculosis PB1/+]
gi|186697893|gb|ACC88522.1| protein of unknown function DUF330 [Yersinia pseudotuberculosis
PB1/+]
Length = 186
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 71/183 (38%), Gaps = 10/183 (5%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTE--STKYDESVQRHIQLIITEPITEKILNSEDIIV 75
+AV++ LS+C + Y L + S QL + L + ++
Sbjct: 5 MAVIVALLLSACSSETS-KTYYQLPALNAPATVSSSVASRQLWVEHVSVADYLAAVGVVY 63
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-QIISAIRS 134
+++ ++ + W+ L + +Q L+ N + + + Q + +D + +
Sbjct: 64 QTNDVQYVIANNNLWASPLDQQLQQTLVTNLSYS--LPGWLVSAQPLDSDQDVLNVTVTG 121
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F D A+I + I+ + ++ F++E K +D +++L + + +
Sbjct: 122 FHGRYDGR-AVIR-GVWILKHQGQLI--KQPFNLELKQSEDGYDALVRTLAEGWQQEAKT 177
Query: 195 IID 197
I
Sbjct: 178 IAA 180
>gi|110835179|ref|YP_694038.1| hypothetical protein ABO_2318 [Alcanivorax borkumensis SK2]
gi|110648290|emb|CAL17766.1| conserved hypothetical protein [Alcanivorax borkumensis SK2]
Length = 169
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 63/186 (33%), Gaps = 21/186 (11%)
Query: 13 IISCSLAVLLCTSLSSCFFHNNPVNI-YDLTESTKYDESVQRHIQLIITEPITEKILNSE 71
+I + +L SC P Y L +T I++ + LN
Sbjct: 1 MIRLLAIAAILCTLWSCSHAPQPSPPGYVLPSAT-LSAHSPLTIKVALAN-----YLNRG 54
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
I+++ S EIQ +W++ L + + + G +
Sbjct: 55 GIVMQLSDSEIQVARHHRWAEPLATQLH-RALEAHMTTGHEQ-------------TLTVE 100
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
+ F+ +S + A DN V + E LE + I++L+R + +
Sbjct: 101 LTRFQGLQGEDRDAAVISGRWTLAGDNGEVAKGRIQWEAALENGGYANLIRTLDRGWQAV 160
Query: 192 SSEIID 197
++EI
Sbjct: 161 AAEIAT 166
>gi|94309523|ref|YP_582733.1| hypothetical protein Rmet_0578 [Cupriavidus metallidurans CH34]
gi|93353375|gb|ABF07464.1| conserved hypothetical protein; putative exported protein
[Cupriavidus metallidurans CH34]
Length = 195
Score = 38.8 bits (89), Expect = 0.43, Method: Composition-based stats.
Identities = 19/134 (14%), Positives = 49/134 (36%), Gaps = 9/134 (6%)
Query: 57 LIITEPITEKILNSEDIIVRSS-PIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV 115
+ ++ + LN ++V ++ L S+WS LP ++ L + K+ V
Sbjct: 49 IEVSPVRVPERLNRTQLVVADGNAGVVKMLDLSRWSAPLPDELRDALSQQLQA--KLGAV 106
Query: 116 VKPNQGI---YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKL 172
QG+ Y++ + + + + A +++ + D ++G + E
Sbjct: 107 DIYQQGLSEVEPVYRVTTEVVRLDADP-GQRASASIAWTVRRLPDGKVLGGRT-EAELPA 164
Query: 173 EKDNKLHFIQSLNR 186
+ + +
Sbjct: 165 PG-QVDGVVNAYRQ 177
>gi|254784637|ref|YP_003072065.1| lipoprotein [Teredinibacter turnerae T7901]
gi|237686369|gb|ACR13633.1| putative lipoprotein [Teredinibacter turnerae T7901]
Length = 207
Score = 38.8 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 25/191 (13%), Positives = 60/191 (31%), Gaps = 14/191 (7%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQR---HIQLIITEPITEKI 67
++ C L L S + C Y L + ++ + + + I +
Sbjct: 2 SNLLRCGLVAGLLMSFAGCGVSGPKTQYYSLFPGVEANQETRLEGDDLSFGVGPIILPEY 61
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWS----DKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
L I+ R++ ++ + W L R++ L ++ + + +
Sbjct: 62 LQQTSIVSRNAGQQLTVSGVNAWGGDLNATLSRVLATNLSTLWQQDDVWAFPW--DTRAR 119
Query: 124 ADYQIISAIRSFEINIDRHCAIITMSLK--IINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
+YQI F +T+ + ++ + + E ++ ++
Sbjct: 120 PNYQIRIVFEDFSGVRGGK---VTLKARWLLLGNKGKQQLAVGSQELSESTSSNSAEAYV 176
Query: 182 QSLNRAFSRIS 192
LN R S
Sbjct: 177 SVLNNLLKRFS 187
>gi|324113724|gb|EGC07699.1| hypothetical protein ERIG_02142 [Escherichia fergusonii B253]
Length = 187
Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 64/181 (35%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D + +S + + H L+ ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK---VIVSGEWLLNHQGQLI-KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|295096311|emb|CBK85401.1| Uncharacterized protein conserved in bacteria [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 188
Score = 38.8 bits (89), Expect = 0.46, Method: Composition-based stats.
Identities = 36/190 (18%), Positives = 77/190 (40%), Gaps = 9/190 (4%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLT---ESTKYDESVQRHIQLIITEPITEKILNSEDII 74
L + L++C ++ + Y L +S S Q L + + L ++
Sbjct: 5 LIIAGALVLTACSSGSDNKSYYQLPLSAQSGAQSSSSQGSRLLWVEQVAVPDYLAGNGVV 64
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
++S ++ + W+ L + ++ L+AN + V G D + +
Sbjct: 65 YQTSDVQYVIANNNLWASPLDQQLRNTLVANLSSQLPGWVVASQPLGSDQD-TLNVNVTG 123
Query: 135 FEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSE 194
F D + +S + + H L+ ++ FH+E K +KD ++ L + +++ S+
Sbjct: 124 FHGRYDG---AVVISGEWLLNHQGQLI-KRPFHLELKQQKDGYDEMVKVLAQGWAQESAA 179
Query: 195 IIDWTLSSLP 204
I +S LP
Sbjct: 180 IAR-EISRLP 188
>gi|317179639|dbj|BAJ57427.1| hypothetical protein HPF30_1330 [Helicobacter pylori F30]
Length = 225
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 43/102 (42%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRH-IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + I++ + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEIMQCPKPLIEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYA-DYQIISAIRSF 135
M++ + E V P G+ A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGVGALTYAVRFTILSF 133
>gi|317010164|gb|ADU80744.1| hypothetical protein HPIN_07800 [Helicobacter pylori India7]
Length = 227
Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTKEIVFKAQDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIY-ADYQIISAIRSF 135
M++ + E V P G Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGTPTYAVRFTILSF 133
>gi|208435331|ref|YP_002266997.1| hypothetical protein HPG27_1386 [Helicobacter pylori G27]
gi|208433260|gb|ACI28131.1| hypothetical protein HPG27_1386 [Helicobacter pylori G27]
Length = 225
Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 18/102 (17%), Positives = 40/102 (39%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTKEIVFKAQDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIY-ADYQIISAIRSF 135
M++ + E V P G Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGTPTYAVRFTILSF 133
>gi|207108349|ref|ZP_03242511.1| hypothetical protein HpylH_01683 [Helicobacter pylori
HPKX_438_CA4C1]
Length = 225
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 15/101 (14%), Positives = 40/101 (39%), Gaps = 2/101 (1%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEITQCPKPLTEVRLISILSADLFNTKEIVFKAKDGQITHGKYQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
M++ + + ++ G Y + I SF
Sbjct: 94 RNMLKTMFMQEAQKACLGVALLPYGTG-APTYAVRFTILSF 133
>gi|50121455|ref|YP_050622.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043]
gi|49611981|emb|CAG75430.1| putative lipoprotein [Pectobacterium atrosepticum SCRI1043]
Length = 188
Score = 38.8 bits (89), Expect = 0.51, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 66/183 (36%), Gaps = 12/183 (6%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ---LIITEPITEKILNSEDIIV 75
+ L LS+C N Y L + Q L + L + ++
Sbjct: 6 TLALVLVLSACSSSNTQKTYYQLPTIADTSTAQTAVTQGRPLWVEHVSVADYLVNTGLVY 65
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAIR 133
+++ ++ + W+ L + +Q L+ N K+ V QG + ++
Sbjct: 66 QTNDVQYVIASNNLWASPLDQQLQQALVVNL--GHKLPGWIVTTQPQGSE-QAVLNVSVT 122
Query: 134 SFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISS 193
F D + + + + + + ++ ++ F V +D +++L + + ++S
Sbjct: 123 GFHGRYDGN---VVVRGEWMLTYQGKVL-KRPFSVLLPQTEDGYDALVRTLAQGWQQVSQ 178
Query: 194 EII 196
I
Sbjct: 179 SIA 181
>gi|261821348|ref|YP_003259454.1| hypothetical protein Pecwa_2068 [Pectobacterium wasabiae WPP163]
gi|261605361|gb|ACX87847.1| protein of unknown function DUF330 [Pectobacterium wasabiae WPP163]
Length = 188
Score = 38.8 bits (89), Expect = 0.52, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 67/181 (37%), Gaps = 8/181 (4%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ---LIITEPITEKILNSEDIIV 75
+ L LS+C N Y L + + Q L + L + ++
Sbjct: 6 TLALVLVLSACSSSNTQKTYYQLPVIADTNITQTAVTQGHPLWVEHVSVADYLVNTGLVY 65
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
+++ ++ + W+ L + +Q L+AN + VV + ++ F
Sbjct: 66 QTNDVQYVIASNNLWASPLDQQLQQALVANL-GHKLPGWVVTTQPQGSEQAVLNVSVTGF 124
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D + + + + + + ++ ++ F+V +D +++L + + ++S I
Sbjct: 125 HGRYDGN---VVVRGEWMLTYQGKVL-KRPFNVVLPQTEDGYDALVRTLAQGWQQVSQSI 180
Query: 196 I 196
Sbjct: 181 A 181
>gi|194765047|ref|XP_001964639.1| GF22941 [Drosophila ananassae]
gi|190614911|gb|EDV30435.1| GF22941 [Drosophila ananassae]
Length = 649
Score = 38.8 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 15/109 (13%), Positives = 38/109 (34%), Gaps = 11/109 (10%)
Query: 97 MIQLKLIANFENNGKISTVVKPNQGIYADYQIIS-------AIRSFEINIDRHCAIITMS 149
++ + FE + + + K +Q D Q+ + F+ H
Sbjct: 208 LLDDNFLEEFEASNRRTLEQKISQPAAGDVQLEESLCGLKEDLEKFQAKQSEHNQRKEAV 267
Query: 150 LKIINAHDNSLVGQKVFHVEE---KLEKDNKLHFIQSLNRAFSRISSEI 195
++N + G + F E+ L +++ N+ S ++ ++
Sbjct: 268 DSVLNGFRG-IFGSETFTEEDFDDPLIGSKIESMVRAFNQVSSTVAEQL 315
>gi|123441885|ref|YP_001005868.1| putative lipoprotein protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|122088846|emb|CAL11652.1| putative lipoprotein protein [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 183
Score = 38.4 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 51/134 (38%), Gaps = 9/134 (6%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTE--STKYDESVQRHIQLIITEPITEKILNSEDII 74
+AV+ LS+C + P Y L + S QL + L + ++
Sbjct: 5 MAVIAALLLSACS--STPSKTYYQLPALSAPAGATSSVASRQLWVEHVGVADYLAAAGVV 62
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-QIISAIR 133
+++ ++ + W+ L + +Q L+ N N + + +Q + +D + +
Sbjct: 63 YQTNDVQYVIASNNLWASPLDQQLQQTLVTNLSNA--LPGWLVSSQPLDSDQDVLNVTVT 120
Query: 134 SFEINIDRHCAIIT 147
F D AII
Sbjct: 121 GFHGRYDGR-AIIR 133
>gi|259418288|ref|ZP_05742206.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259345683|gb|EEW57527.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 185
Score = 38.4 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 51/163 (31%), Gaps = 6/163 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
L LC + + + Y + + + + ++ +I+
Sbjct: 4 LFAFLCLATALTACSGSNDARYLIAATPGEPVKNLSSRSIEVRLVSLPTYASASEIVSEG 63
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQGIYADYQIISAIRSFE 136
+ +QW+D R + + L + G V AD ++ + +
Sbjct: 64 EGGALFNEDRAQWADDPARGMSVALARGLSDRTGAAVAVEPWPLNTPADVRLDVRV---D 120
Query: 137 INIDRHCAIITMSLK-IINAHDNSLVG-QKVFHVEEKLEKDNK 177
+ R + S + +++ + + K F +E + +
Sbjct: 121 QSYARAGGVFEFSGQYAVSSPEGRVREFVKRFDIETPVAEPGP 163
>gi|324009874|gb|EGB79093.1| hypothetical protein HMPREF9532_00383 [Escherichia coli MS 57-2]
Length = 187
Score = 38.4 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 65/181 (35%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D + +S + + H L+ ++ FH+E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK---VIVSGEWLLNHQGQLI-KRPFHLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|186474044|ref|YP_001861386.1| hypothetical protein Bphy_5258 [Burkholderia phymatum STM815]
gi|184196376|gb|ACC74340.1| protein of unknown function DUF330 [Burkholderia phymatum STM815]
Length = 194
Score = 38.4 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 23/190 (12%), Positives = 63/190 (33%), Gaps = 1/190 (0%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI 67
+ + +A+L+ TSL+ C + + + R + +T +
Sbjct: 1 MTRSASTLARVAMLIGTSLAGCGHSPATHYVRLNASPSGALLATTRIAPVQLTAVHIPTV 60
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQ 127
L+ +++ + SP + + W L +M++ L + V P+ D +
Sbjct: 61 LDRPEVVTQVSPNRLTVDDRNHWGAPLAQMMRGTLAQDLTMRLPAGAFVFPDAPAPPDTR 120
Query: 128 IISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRA 187
+ + + D +++ + + + L + +L+R
Sbjct: 121 TLV-VTVLDAEADTKTMTFQAGWTLLSGQPPHVTLTREVTLTSTLTSRDAAEQAAALSRI 179
Query: 188 FSRISSEIID 197
++ I+
Sbjct: 180 LGELADRIVA 189
>gi|308186294|ref|YP_003930425.1| hypothetical protein Pvag_0774 [Pantoea vagans C9-1]
gi|308056804|gb|ADO08976.1| Uncharacterized lipoprotein ymbA precursor [Pantoea vagans C9-1]
Length = 189
Score = 38.4 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 65/188 (34%), Gaps = 13/188 (6%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQ---LIITEPITEKILN 69
L L S S N Y L ++ S Q + L + + L
Sbjct: 4 GLILCAALVLSACSSSVDNT---WYQLPSGAASMQVTSSQLNEAQPMLWVQQVTVPDYLA 60
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
++ ++S ++ + W+ L + +Q LI N V G D +
Sbjct: 61 GNGLVYQTSDVKYVIAANNLWASPLDQQLQQTLITNLSKALPGRLVAGSPLGAQHD-TLN 119
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
I F+ D AI++ + H + ++ F++ +D +++L +
Sbjct: 120 VTITGFQGRYDGK-AIVSGEWTL--EHQGR-LTKQAFNLVLPQTEDGYDAMVRTLAAGWQ 175
Query: 190 RISSEIID 197
+ + +I +
Sbjct: 176 QTAQKIAN 183
>gi|309701231|emb|CBJ00531.1| putative lipoprotein [Escherichia coli ETEC H10407]
Length = 182
Score = 38.4 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 3/122 (2%)
Query: 26 LSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L +S Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGKV 126
Query: 144 AI 145
+
Sbjct: 127 IV 128
>gi|15646072|ref|NP_208254.1| hypothetical protein HP1463 [Helicobacter pylori 26695]
gi|2314644|gb|AAD08508.1| predicted coding region HP1463 [Helicobacter pylori 26695]
Length = 225
Score = 38.4 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEITQCAKPLTEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|74311509|ref|YP_309928.1| hypothetical protein SSON_0956 [Shigella sonnei Ss046]
gi|191169750|ref|ZP_03031411.1| putative lipoprotein [Escherichia coli B7A]
gi|218694427|ref|YP_002402094.1| hypothetical protein EC55989_1001 [Escherichia coli 55989]
gi|73854986|gb|AAZ87693.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|190900210|gb|EDV60098.1| putative lipoprotein [Escherichia coli B7A]
gi|218351159|emb|CAU96863.1| conserved hypothetical protein [Escherichia coli 55989]
gi|320202350|gb|EFW76921.1| hypothetical protein ECoL_00397 [Escherichia coli EC4100B]
gi|323165432|gb|EFZ51219.1| hypothetical protein SS53G_4116 [Shigella sonnei 53G]
gi|323174941|gb|EFZ60556.1| hypothetical protein ECLT68_0498 [Escherichia coli LT-68]
gi|323185337|gb|EFZ70701.1| hypothetical protein ECOK1357_1290 [Escherichia coli 1357]
Length = 182
Score = 38.4 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 60/173 (34%), Gaps = 7/173 (4%)
Query: 26 LSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L + Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGK- 125
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
+I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 126 -VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASIA 175
>gi|95930827|ref|ZP_01313558.1| protein of unknown function DUF330 [Desulfuromonas acetoxidans DSM
684]
gi|95133069|gb|EAT14737.1| protein of unknown function DUF330 [Desulfuromonas acetoxidans DSM
684]
Length = 185
Score = 38.4 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 19/121 (15%), Positives = 36/121 (29%), Gaps = 9/121 (7%)
Query: 8 IIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTES---TKYDESVQRHIQLIITEPIT 64
+ + + L ++ C P Y L S I + ++
Sbjct: 1 MRRASFYLTIVTTLGLLLVAGCSSPTTPKTHYYLIAPDYQASAVLSPPATISVECAPFLS 60
Query: 65 EKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYA 124
+ L +V I +W++ LP MI L + +G + P +
Sbjct: 61 QGGL-----VVEHGDQTIATAHYHRWAEPLPGMISRYLQRRLQ-SGLRTETTPPTMTLLI 114
Query: 125 D 125
D
Sbjct: 115 D 115
>gi|91210047|ref|YP_540033.1| hypothetical protein UTI89_C1017 [Escherichia coli UTI89]
gi|110641141|ref|YP_668871.1| hypothetical protein ECP_0957 [Escherichia coli 536]
gi|117623163|ref|YP_852076.1| hypothetical protein APECO1_58 [Escherichia coli APEC O1]
gi|191172142|ref|ZP_03033686.1| putative lipoprotein [Escherichia coli F11]
gi|215486070|ref|YP_002328501.1| hypothetical protein E2348C_0938 [Escherichia coli O127:H6 str.
E2348/69]
gi|237707065|ref|ZP_04537546.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|293404251|ref|ZP_06648245.1| lipoprotein ymbA [Escherichia coli FVEC1412]
gi|298380035|ref|ZP_06989640.1| lipoprotein ymbA [Escherichia coli FVEC1302]
gi|300896331|ref|ZP_07114874.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|300982996|ref|ZP_07176400.1| hypothetical protein HMPREF9553_02370 [Escherichia coli MS 200-1]
gi|306812601|ref|ZP_07446794.1| putative lipoprotein [Escherichia coli NC101]
gi|312968989|ref|ZP_07783196.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|331657017|ref|ZP_08357979.1| putative lipoprotein [Escherichia coli TA206]
gi|331672481|ref|ZP_08373271.1| putative lipoprotein [Escherichia coli TA280]
gi|331682456|ref|ZP_08383075.1| putative lipoprotein [Escherichia coli H299]
gi|91071621|gb|ABE06502.1| conserved hypothetical protein [Escherichia coli UTI89]
gi|110342733|gb|ABG68970.1| hypothetical protein ECP_0957 [Escherichia coli 536]
gi|115512287|gb|ABJ00362.1| conserved hypothetical protein [Escherichia coli APEC O1]
gi|190907669|gb|EDV67264.1| putative lipoprotein [Escherichia coli F11]
gi|215264142|emb|CAS08486.1| predicted protein [Escherichia coli O127:H6 str. E2348/69]
gi|222032676|emb|CAP75415.1| Uncharacterized lipoprotein ymbA [Escherichia coli LF82]
gi|226898275|gb|EEH84534.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|284920796|emb|CBG33859.1| putative lipoprotein [Escherichia coli 042]
gi|291428837|gb|EFF01862.1| lipoprotein ymbA [Escherichia coli FVEC1412]
gi|294492613|gb|ADE91369.1| putative lipoprotein [Escherichia coli IHE3034]
gi|298279733|gb|EFI21241.1| lipoprotein ymbA [Escherichia coli FVEC1302]
gi|300307013|gb|EFJ61533.1| hypothetical protein HMPREF9553_02370 [Escherichia coli MS 200-1]
gi|300359796|gb|EFJ75666.1| conserved hypothetical protein [Escherichia coli MS 198-1]
gi|305853364|gb|EFM53803.1| putative lipoprotein [Escherichia coli NC101]
gi|307627628|gb|ADN71932.1| putative lipoprotein [Escherichia coli UM146]
gi|312286391|gb|EFR14304.1| conserved hypothetical protein [Escherichia coli 2362-75]
gi|312945465|gb|ADR26292.1| hypothetical protein NRG857_04325 [Escherichia coli O83:H1 str. NRG
857C]
gi|315287568|gb|EFU46974.1| conserved hypothetical protein [Escherichia coli MS 110-3]
gi|315296238|gb|EFU55545.1| conserved hypothetical protein [Escherichia coli MS 16-3]
gi|320196561|gb|EFW71184.1| hypothetical protein EcoM_01101 [Escherichia coli WV_060327]
gi|323190766|gb|EFZ76035.1| hypothetical protein ECRN5871_1005 [Escherichia coli RN587/1]
gi|323953346|gb|EGB49212.1| hypothetical protein ERKG_00231 [Escherichia coli H252]
gi|323958251|gb|EGB53960.1| hypothetical protein ERLG_00690 [Escherichia coli H263]
gi|323976668|gb|EGB71756.1| hypothetical protein ERFG_02457 [Escherichia coli TW10509]
gi|324012934|gb|EGB82153.1| hypothetical protein HMPREF9533_03041 [Escherichia coli MS 60-1]
gi|331055265|gb|EGI27274.1| putative lipoprotein [Escherichia coli TA206]
gi|331070387|gb|EGI41752.1| putative lipoprotein [Escherichia coli TA280]
gi|331080087|gb|EGI51266.1| putative lipoprotein [Escherichia coli H299]
Length = 187
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK--VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|323947258|gb|EGB43266.1| hypothetical protein EREG_01203 [Escherichia coli H120]
Length = 187
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 64/181 (35%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLVGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D + +S + + H L+ ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK---VIVSGEWLLNHQGQLI-KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|300937699|ref|ZP_07152501.1| conserved hypothetical protein [Escherichia coli MS 21-1]
gi|300457260|gb|EFK20753.1| conserved hypothetical protein [Escherichia coli MS 21-1]
Length = 187
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|325496883|gb|EGC94742.1| hypothetical protein ECD227_0980 [Escherichia fergusonii ECD227]
Length = 187
Score = 38.0 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|227884089|ref|ZP_04001894.1| lipoprotein [Escherichia coli 83972]
gi|300978387|ref|ZP_07174238.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|301047791|ref|ZP_07194844.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|227838841|gb|EEJ49307.1| lipoprotein [Escherichia coli 83972]
gi|300300323|gb|EFJ56708.1| conserved hypothetical protein [Escherichia coli MS 185-1]
gi|300409675|gb|EFJ93213.1| conserved hypothetical protein [Escherichia coli MS 45-1]
gi|307552784|gb|ADN45559.1| putative lipoprotein [Escherichia coli ABU 83972]
gi|315291206|gb|EFU50566.1| conserved hypothetical protein [Escherichia coli MS 153-1]
gi|330910725|gb|EGH39235.1| putative lipoprotein [Escherichia coli AA86]
Length = 187
Score = 38.0 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|89107802|ref|AP_001582.1| hypothetical protein [Escherichia coli str. K-12 substr. W3110]
gi|254161066|ref|YP_003044174.1| hypothetical protein ECB_00956 [Escherichia coli B str. REL606]
gi|85674798|dbj|BAA35710.2| conserved hypothetical protein [Escherichia coli str. K12 substr.
W3110]
gi|242376767|emb|CAQ31480.1| conserved protein [Escherichia coli BL21(DE3)]
gi|253972967|gb|ACT38638.1| hypothetical protein ECB_00956 [Escherichia coli B str. REL606]
gi|253977181|gb|ACT42851.1| hypothetical protein ECD_00956 [Escherichia coli BL21(DE3)]
Length = 182
Score = 38.0 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 3/122 (2%)
Query: 26 LSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L + Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGKV 126
Query: 144 AI 145
+
Sbjct: 127 IV 128
>gi|192361811|ref|YP_001982087.1| putative lipoprotein [Cellvibrio japonicus Ueda107]
gi|190687976|gb|ACE85654.1| putative lipoprotein [Cellvibrio japonicus Ueda107]
Length = 203
Score = 38.0 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 31/194 (15%), Positives = 69/194 (35%), Gaps = 4/194 (2%)
Query: 3 KKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEP 62
++++ ++ I L +LLC+ +C N Y L+ Q Q+I P
Sbjct: 6 RRMSNNMRNISIPLGL-ILLCSLFMACQHSPRQ-NYYLLSAPAVSTPDQQAIEQVIGIGP 63
Query: 63 ITEKILNSEDIIVRSSPIE-IQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
+ +V P + +Q W++ L + I L N V+
Sbjct: 64 LEIADYLKRKHMVSVRPDQSLQIAANDFWAEPLDKGIIRVLALNLTQQNPSRMVLPFPWR 123
Query: 122 IYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFI 181
+ + ++ +N+D A I ++ +I + + + ++ F E
Sbjct: 124 SDSRPPLSVRLQVHSLNLDNEGASIHVTWEIFDNQARATLNRQHFIRRIPCE-RQAAAMA 182
Query: 182 QSLNRAFSRISSEI 195
++ + ++ EI
Sbjct: 183 KAYGDLLAALAQEI 196
>gi|168752842|ref|ZP_02777864.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4113]
gi|168758978|ref|ZP_02783985.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4401]
gi|168771733|ref|ZP_02796740.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4486]
gi|168776193|ref|ZP_02801200.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4196]
gi|168783955|ref|ZP_02808962.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4076]
gi|168787383|ref|ZP_02812390.1| putative lipoprotein [Escherichia coli O157:H7 str. EC869]
gi|195940402|ref|ZP_03085784.1| hypothetical protein EscherichcoliO157_29085 [Escherichia coli
O157:H7 str. EC4024]
gi|208805647|ref|ZP_03247984.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4206]
gi|208816071|ref|ZP_03257250.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4045]
gi|208822014|ref|ZP_03262333.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4042]
gi|209399733|ref|YP_002269621.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4115]
gi|217324772|ref|ZP_03440856.1| putative lipoprotein [Escherichia coli O157:H7 str. TW14588]
gi|254792152|ref|YP_003076989.1| hypothetical protein ECSP_1058 [Escherichia coli O157:H7 str.
TW14359]
gi|261227455|ref|ZP_05941736.1| hypothetical protein EscherichiacoliO157_23096 [Escherichia coli
O157:H7 str. FRIK2000]
gi|261256122|ref|ZP_05948655.1| hypothetical protein EscherichiacoliO157EcO_09869 [Escherichia coli
O157:H7 str. FRIK966]
gi|291281952|ref|YP_003498770.1| putative lipoprotein [Escherichia coli O55:H7 str. CB9615]
gi|187768368|gb|EDU32212.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4196]
gi|188013502|gb|EDU51624.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4113]
gi|188998773|gb|EDU67759.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4076]
gi|189354321|gb|EDU72740.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4401]
gi|189359571|gb|EDU77990.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4486]
gi|189372733|gb|EDU91149.1| putative lipoprotein [Escherichia coli O157:H7 str. EC869]
gi|208725448|gb|EDZ75049.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4206]
gi|208732719|gb|EDZ81407.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4045]
gi|208737499|gb|EDZ85182.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4042]
gi|209161133|gb|ACI38566.1| putative lipoprotein [Escherichia coli O157:H7 str. EC4115]
gi|217320993|gb|EEC29417.1| putative lipoprotein [Escherichia coli O157:H7 str. TW14588]
gi|254591552|gb|ACT70913.1| conserved protein [Escherichia coli O157:H7 str. TW14359]
gi|290761825|gb|ADD55786.1| putative lipoprotein [Escherichia coli O55:H7 str. CB9615]
gi|320192559|gb|EFW67200.1| hypothetical protein ECoD_00486 [Escherichia coli O157:H7 str.
EC1212]
gi|320637820|gb|EFX07612.1| putative lipoprotein [Escherichia coli O157:H7 str. G5101]
gi|320642945|gb|EFX12146.1| putative lipoprotein [Escherichia coli O157:H- str. 493-89]
gi|320648402|gb|EFX17057.1| putative lipoprotein [Escherichia coli O157:H- str. H 2687]
gi|320653718|gb|EFX21792.1| putative lipoprotein [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320659561|gb|EFX27124.1| putative lipoprotein [Escherichia coli O55:H7 str. USDA 5905]
gi|326338151|gb|EGD61980.1| hypothetical protein ECF_05102 [Escherichia coli O157:H7 str. 1125]
gi|326346128|gb|EGD69866.1| putative lipoprotein [Escherichia coli O157:H7 str. 1044]
Length = 187
Score = 38.0 bits (87), Expect = 0.71, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|256018789|ref|ZP_05432654.1| hypothetical protein ShiD9_07726 [Shigella sp. D9]
gi|300824159|ref|ZP_07104278.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331676742|ref|ZP_08377438.1| putative lipoprotein [Escherichia coli H591]
gi|300523335|gb|EFK44404.1| conserved hypothetical protein [Escherichia coli MS 119-7]
gi|331075431|gb|EGI46729.1| putative lipoprotein [Escherichia coli H591]
gi|332102219|gb|EGJ05565.1| conserved hypothetical protein [Shigella sp. D9]
Length = 187
Score = 38.0 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 40/130 (30%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLVGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|161522829|ref|YP_001585758.1| hypothetical protein Bmul_5803 [Burkholderia multivorans ATCC
17616]
gi|189348332|ref|YP_001941528.1| putative lipoprotein [Burkholderia multivorans ATCC 17616]
gi|160346382|gb|ABX19466.1| protein of unknown function DUF330 [Burkholderia multivorans ATCC
17616]
gi|189338470|dbj|BAG47538.1| putative lipoprotein [Burkholderia multivorans ATCC 17616]
Length = 236
Score = 38.0 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 15/104 (14%), Positives = 37/104 (35%), Gaps = 6/104 (5%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKY--DESVQRHIQLI 58
M+ +L + ++ + A L S + + PV+ + L+ D + +
Sbjct: 1 MNARLFRRLRMTARIATCAALAVLSACA----SPPVHFHTLSAPAGAGGDRAAHPAWLID 56
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKL 102
+ + ++V+ P L +W+ L ++ L
Sbjct: 57 VQTLHVAAPADGNRLVVQRGPGLADILEQERWAAPLGDEMRDGL 100
>gi|331646211|ref|ZP_08347314.1| putative lipoprotein [Escherichia coli M605]
gi|331044963|gb|EGI17090.1| putative lipoprotein [Escherichia coli M605]
Length = 187
Score = 38.0 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDNLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|71666215|ref|XP_820069.1| dispersed gene family protein 1 (DGF-1) [Trypanosoma cruzi strain CL
Brener]
gi|70885398|gb|EAN98218.1| dispersed gene family protein 1 (DGF-1), putative [Trypanosoma cruzi]
Length = 3444
Score = 38.0 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 72/186 (38%), Gaps = 14/186 (7%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK 66
++K ++ L ++S+ + PV + S E++ + L T P
Sbjct: 2498 SLLKGAVLYVMGGGALRGAVSAGSDESGPVEL-----SVCDVEALNGALVLTGTYPAGSV 2552
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQL--KLIAN-FENNG-KISTVVKPNQGI 122
+ ++ ++V + P + YL GSQ S P ++ +L+ + +G + TV+ + +
Sbjct: 2553 LTVTDSLLVATRPTPLVYLPGSQSSPYAPVLVLSGLRLVRSVLVVSGVALVTVMTGGRTV 2612
Query: 123 YAD---YQIISAIRSFEINIDRHCAIITMSLKIINAHDN--SLVGQKVFHVEEKLEKDNK 177
D +++ + + + + S +++ + + G +V+ +
Sbjct: 2613 AVDGAVLELVGGGVALDAAVLGGEYALYASARVVASWSAVLRVSGSQVYAAHGLVFGSGV 2672
Query: 178 LHFIQS 183
+
Sbjct: 2673 EASASA 2678
>gi|119478650|ref|XP_001259407.1| nonribosomal peptide synthase, putative [Neosartorya fischeri NRRL
181]
gi|119407561|gb|EAW17510.1| nonribosomal peptide synthase, putative [Neosartorya fischeri NRRL
181]
Length = 2179
Score = 38.0 bits (87), Expect = 0.87, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 58/160 (36%), Gaps = 19/160 (11%)
Query: 55 IQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIAN---FE---N 108
+L+I+ PI + + P + ++ +W+ + + + F +
Sbjct: 367 GELLISGPIVGRG-------YLNQPQQKSFVSSPRWATEFAIPAEERFYKTGDLFRYNVD 419
Query: 109 NGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHD---NSLVGQKV 165
+G + + + + + Q ++ E + R I +IN + L+ +
Sbjct: 420 DGTLRYIGRKDTQVKIHGQ-RVDLQEIEHHARRFQERIDAVADVINPSNTNGRKLLA--L 476
Query: 166 FHVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
F + + D + ++ AF +S + DW LP
Sbjct: 477 FVTTAEADADQNEALLAPMDDAFCALSDSLQDWLREWLPA 516
>gi|330991857|ref|ZP_08315806.1| hypothetical protein SXCC_01762 [Gluconacetobacter sp. SXCC-1]
gi|329760878|gb|EGG77373.1| hypothetical protein SXCC_01762 [Gluconacetobacter sp. SXCC-1]
Length = 223
Score = 38.0 bits (87), Expect = 0.88, Method: Composition-based stats.
Identities = 24/149 (16%), Positives = 52/149 (34%), Gaps = 19/149 (12%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQ--------LIIT 60
+ + + +L LS+C + PV Y L + + +
Sbjct: 12 LNPSLRAAGGLLLCAAMLSACS--SAPVRFYTLGAPAVAVGAQGTGTTAITDSTPVIEVE 69
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDK----LPRMIQLKLIANFENNGKISTVV 116
L+S+DI+VR + EI+ +W+ + +I +L + + V
Sbjct: 70 RTRLPDYLDSQDIMVR-NGHEIERSGLGRWASRLSVGATDLITARLAQKWPD----LFVT 124
Query: 117 KPNQGIYADYQIISAIRSFEINIDRHCAI 145
Q +++ I +++ D A+
Sbjct: 125 DQPQPDRPTWRLQLNISRLDVSRDGQSAL 153
>gi|218700529|ref|YP_002408158.1| hypothetical protein ECIAI39_2195 [Escherichia coli IAI39]
gi|218370515|emb|CAR18322.1| conserved hypothetical protein [Escherichia coli IAI39]
Length = 182
Score = 38.0 bits (87), Expect = 0.89, Method: Composition-based stats.
Identities = 28/173 (16%), Positives = 61/173 (35%), Gaps = 7/173 (4%)
Query: 26 LSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L +S Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQGGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGK- 125
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
+I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 126 -VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASIA 175
>gi|294670871|ref|ZP_06735727.1| hypothetical protein NEIELOOT_02575 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307358|gb|EFE48601.1| hypothetical protein NEIELOOT_02575 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 175
Score = 37.6 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 54/163 (33%), Gaps = 20/163 (12%)
Query: 35 PVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
P + + + E T + L + + LN + RS + Y W+ L
Sbjct: 28 PDSTFQMPEHT----RGKTETALRVVP---AEPLNRGGLAYRSDAFRLDYARNHLWAQPL 80
Query: 95 PRMIQLKLIANFEN--NGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKI 152
+ + F G+ ++ + + +F+ + +
Sbjct: 81 DQAAAARFANEFNRMDTGRYFVPAHQSKAAQSA---TIYLEAFQGSYLGST--------L 129
Query: 153 INAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ + S G + F E + D ++SL++ S +++I
Sbjct: 130 VEGYIRSDSGSRRFRAETPQQGDGYEAMLESLSQGVSAAAAQI 172
>gi|291279795|ref|YP_003496630.1| hypothetical protein DEFDS_1413 [Deferribacter desulfuricans SSM1]
gi|290754497|dbj|BAI80874.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
Length = 396
Score = 37.6 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 13/80 (16%), Positives = 27/80 (33%), Gaps = 7/80 (8%)
Query: 119 NQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKD--- 175
+ A+ + E + + M++KII+ ++ K E K
Sbjct: 208 SDNALANLALSI----LEATTEGWNVNVEMTVKIIDVATGRIIASKKVKGRELAGKQPNF 263
Query: 176 NKLHFIQSLNRAFSRISSEI 195
N I + +A + +I
Sbjct: 264 NPELIITAAKKAMGEAALDI 283
>gi|82544724|ref|YP_408671.1| hypothetical protein SBO_2279 [Shigella boydii Sb227]
gi|81246135|gb|ABB66843.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 182
Score = 37.6 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 20/122 (16%), Positives = 40/122 (32%), Gaps = 3/122 (2%)
Query: 26 LSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L +S Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSVQD-TLNVTVTEFNGRYDGKV 126
Query: 144 AI 145
+
Sbjct: 127 IV 128
>gi|331662364|ref|ZP_08363287.1| putative lipoprotein [Escherichia coli TA143]
gi|331060786|gb|EGI32750.1| putative lipoprotein [Escherichia coli TA143]
Length = 187
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 7/181 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVVQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
D +I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 124 NGRYDGK--VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASI 179
Query: 196 I 196
Sbjct: 180 A 180
>gi|113970204|ref|YP_733997.1| hypothetical protein Shewmr4_1866 [Shewanella sp. MR-4]
gi|113884888|gb|ABI38940.1| protein of unknown function DUF330 [Shewanella sp. MR-4]
Length = 197
Score = 37.6 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 22/195 (11%), Positives = 68/195 (34%), Gaps = 29/195 (14%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHI------QLIITEPITEKILNSE 71
L + + ++ C P + + T + + L + LN+
Sbjct: 4 LVLFIVFLMAGCSSQPAPKTYFIALQHTTDPGLISPDMGSGGLCSLAVNRVNLADYLNTN 63
Query: 72 DIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISA 131
++ ++SP E+ W+ L IQ +L + ++ + A + + +
Sbjct: 64 GLLYQTSPQELVVARQHLWAGSLAEQIQFRL----------NNLLSQPCSVPATWTLSTD 113
Query: 132 -----------IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ F + A++ ++++ ++ ++ F L ++
Sbjct: 114 EPTKLGQLDLTVTEFYGSYTG-EAVVGGQWRLMD-KMQQVLLEQPFQYRIALPEEGYTAL 171
Query: 181 IQSLNRAFSRISSEI 195
+ S+++ +++ +I
Sbjct: 172 VSSMDKGLIQLADDI 186
>gi|37525703|ref|NP_929047.1| hypothetical protein plu1768 [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|36785132|emb|CAE14061.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 187
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTE---STKYDESVQRHIQLIITEPITEKILNSEDII 74
LA++L +S+C Y L +++ VQ QL + + L+S ++
Sbjct: 5 LALILVIFISACSRQPE-KTYYQLPVVAIASQKSAIVQHDRQLWVQRVMLSDYLSSSGVV 63
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+SS + W+ L + +Q L+A V D + + S
Sbjct: 64 YQSSDVSYVSAANHLWASPLEQQLQQVLVAELTMALPQRLVSAQPLVNKPD-TLDVTVTS 122
Query: 135 FEINIDRHC 143
F D
Sbjct: 123 FHGRYDGKV 131
>gi|323967199|gb|EGB62623.1| hypothetical protein ERJG_01482 [Escherichia coli M863]
gi|327253744|gb|EGE65373.1| hypothetical protein ECSTEC7V_1169 [Escherichia coli STEC_7v]
Length = 187
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNHLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|91792029|ref|YP_561680.1| hypothetical protein Sden_0667 [Shewanella denitrificans OS217]
gi|91714031|gb|ABE53957.1| protein of unknown function DUF330 [Shewanella denitrificans OS217]
Length = 211
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 28/200 (14%), Positives = 68/200 (34%), Gaps = 17/200 (8%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT-EPITE-K 66
I + + +L L+ C N Y LT + + ++L I PI+ +
Sbjct: 6 IMRLTAVLGIFILQAALLTGCQTSPQ-KNYYVLTSAAPPRLASNTSLELAIGIGPISIPE 64
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKL----PRMIQLKLIANFENNGKISTVVKPNQGI 122
L+ ++ ++ + S W++ L R++ L L + + +
Sbjct: 65 YLHFTQLVYQTQAGYLHRFDNSYWAEPLDQGINRILGLNLTQASPSRQLVQFPWRLEN-- 122
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQ-------KVFHVEEKLEKD 175
Y I I + + + +LK +++ ++ + F E+
Sbjct: 123 RPQYSISINILNLNLMEGQASLQAVWTLKDLSSTTKAIPASPQKDGQGQHFQASVPAEQS 182
Query: 176 NKLHFIQSLNRAFSRISSEI 195
+ + ++ +S +I
Sbjct: 183 AT-GLVMAYSQLLQLLSEQI 201
>gi|162146511|ref|YP_001600970.1| hypothetical protein GDI_0687 [Gluconacetobacter diazotrophicus PAl
5]
gi|161785086|emb|CAP54630.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
PAl 5]
Length = 218
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSS 78
V L +C Y L + + + + P L+ + I+
Sbjct: 27 TVAAAGPLGACSSDPA---FYALAPWPGAAQGGA-PMVIEVRTPNVAVSLDRDRIVRSDG 82
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFEN 108
++ G+ WS+ LP MI L A+ +
Sbjct: 83 DYRVRLADGAAWSESLPGMIAHVLTADLQQ 112
>gi|320664332|gb|EFX31483.1| putative lipoprotein [Escherichia coli O157:H7 str. LSU-61]
Length = 187
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 21/130 (16%), Positives = 42/130 (32%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L +S Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIANNNLWASPLDQQLRNTLVANLSMQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|209543490|ref|YP_002275719.1| hypothetical protein Gdia_1322 [Gluconacetobacter diazotrophicus
PAl 5]
gi|209531167|gb|ACI51104.1| protein of unknown function DUF330 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 217
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 4/90 (4%)
Query: 19 AVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSS 78
V L +C Y L + + + + P L+ + I+
Sbjct: 26 TVAAAGPLGACSSDPA---FYALAPWPGAAQGGA-PMVIEVRTPNVAVSLDRDRIVRSDG 81
Query: 79 PIEIQYLIGSQWSDKLPRMIQLKLIANFEN 108
++ G+ WS+ LP MI L A+ +
Sbjct: 82 DYRVRLADGAAWSESLPGMIAHVLTADLQQ 111
>gi|186477284|ref|YP_001858754.1| hypothetical protein Bphy_2536 [Burkholderia phymatum STM815]
gi|184193743|gb|ACC71708.1| protein of unknown function DUF330 [Burkholderia phymatum STM815]
Length = 233
Score = 36.9 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 63/170 (37%), Gaps = 10/170 (5%)
Query: 32 HNNPVNIYDLT---ESTKYDESVQRHIQLI-ITEPITEKILNSEDIIVRSSPIEIQYLIG 87
+ P + Y L+ S S LI + + ++V++ P ++Q L
Sbjct: 30 SSPPSHFYTLSAGDASPDAVRSASNPAFLIEVPPVDVPPQVAKSQLVVQTGPTQVQVLEQ 89
Query: 88 SQWSDKLPRMIQLKLIANF-ENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAII 146
+W+ I+ L ++ + G I P Y+I ++ FE I
Sbjct: 90 ERWASLPGDEIRRALSSSLTQQLGTIDVYGSPYPERVPVYRISVNVQRFESWPGSRTLID 149
Query: 147 TM-SLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ S++ + +++ + V E + + RA +IS+EI
Sbjct: 150 AVWSVRAV--RTQAVLTCRSV-VSEPVSG-SYDAIADGHRRAVQQISTEI 195
>gi|317011596|gb|ADU85343.1| hypothetical protein HPSA_06935 [Helicobacter pylori SouthAfrica7]
Length = 225
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 36 VNIYDLTESTKYDESVQRHIQ-LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKL 94
+ YDL S+ + + + + ++ + N+++I+ ++ +I + +W D
Sbjct: 34 IRTYDLNASSFEIAQCVKPLTEVRLISILSADLFNTKEIVFKAKDGQITHGKHQKWIDLP 93
Query: 95 PRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISAIRSF 135
M++ + E V P G A Y + I SF
Sbjct: 94 RNMLKTMFMQ--EAQKACLGVALPPYGAGAPTYAVRFTILSF 133
>gi|294054791|ref|YP_003548449.1| protein of unknown function DUF330 [Coraliomargarita akajimensis
DSM 45221]
gi|293614124|gb|ADE54279.1| protein of unknown function DUF330 [Coraliomargarita akajimensis
DSM 45221]
Length = 196
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 29/200 (14%), Positives = 69/200 (34%), Gaps = 16/200 (8%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYD---ESVQRHIQLIITEP 62
K+ I S + C +L + + +Y L + + + I P
Sbjct: 3 MKMYAIGIAGLSFLLSACVNL---KPVEDNLKLYVLGDPKGVEVVETASSVEECFYIASP 59
Query: 63 ITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGI 122
L+++ +VR+ E+ +W++ L I L G + G
Sbjct: 60 DLPSHLSNDRFMVRTLNGELIEKSDVRWAEPLEEGICRALSEYISREG-----GRWVTGY 114
Query: 123 YADYQIISAIRSFEINIDRHCAIITMSLKI-----INAHDNSLVGQKVFHVEEKLEKDNK 177
Y ++ + I + + + S++I + + L G + + ++
Sbjct: 115 YPWPKLEANIPQLRVRFNELAFVDDGSVRISVFWVVRNRSDVLSGGVYNTYDLSWDPESP 174
Query: 178 LHFIQSLNRAFSRISSEIID 197
+++LN A +++ +I
Sbjct: 175 ESLVKALNAALEGLATAVIA 194
>gi|257092748|ref|YP_003166389.1| glycosyl transferase family 51 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257045272|gb|ACV34460.1| glycosyl transferase family 51 [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 800
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 17/119 (14%), Positives = 42/119 (35%), Gaps = 6/119 (5%)
Query: 57 LIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF--ENNGKIST 114
L++ I ++ + + V +Q + + W + L+ F E+ +
Sbjct: 321 LVVRTTIDSRLQAAANQAVTRQGNSLQNIANAAWGKRSAWGTDSSLVQAFIRESPEYAAA 380
Query: 115 VVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSL---VGQKVFHVEE 170
+ K A ++ + + F + + I + I+ + + VG + F E
Sbjct: 381 IAKDRTPAQAMLELQAD-KDFMRALRQQKTQIQIGFLAIDPRNGHIKAWVGSRDFEQEA 438
>gi|82776243|ref|YP_402592.1| hypothetical protein SDY_0925 [Shigella dysenteriae Sd197]
gi|218557850|ref|YP_002390763.1| hypothetical protein ECS88_0973 [Escherichia coli S88]
gi|218688788|ref|YP_002397000.1| hypothetical protein ECED1_0975 [Escherichia coli ED1a]
gi|218704375|ref|YP_002411894.1| hypothetical protein ECUMN_1141 [Escherichia coli UMN026]
gi|309786684|ref|ZP_07681304.1| conserved hypothetical protein [Shigella dysenteriae 1617]
gi|81240391|gb|ABB61101.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|218364619|emb|CAR02305.1| conserved hypothetical protein [Escherichia coli S88]
gi|218426352|emb|CAR07177.1| conserved hypothetical protein [Escherichia coli ED1a]
gi|218431472|emb|CAR12350.1| conserved hypothetical protein [Escherichia coli UMN026]
gi|308925377|gb|EFP70864.1| conserved hypothetical protein [Shigella dysenteriae 1617]
Length = 182
Score = 36.9 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 60/173 (34%), Gaps = 7/173 (4%)
Query: 26 LSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L + Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGK- 125
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
+I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 126 -VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASIA 175
>gi|218553539|ref|YP_002386452.1| hypothetical protein ECIAI1_0993 [Escherichia coli IAI1]
gi|218360307|emb|CAQ97857.1| conserved hypothetical protein [Escherichia coli IAI1]
Length = 182
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 27/173 (15%), Positives = 59/173 (34%), Gaps = 7/173 (4%)
Query: 26 LSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L C N Y L + Q + L + + L ++ ++S ++
Sbjct: 8 LVGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVTVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGK- 125
Query: 144 AIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
+I ++N + ++ F +E +D ++ L +S+ ++ I
Sbjct: 126 -VIVSGEWLLNHQGQLI--KRPFRLEGVQTQDGYDEMVKVLASVWSQEAASIA 175
>gi|241206107|ref|YP_002977203.1| adenylate/guanylate cyclase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859997|gb|ACS57664.1| adenylate/guanylate cyclase with TPR repeats [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 595
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 56/167 (33%), Gaps = 23/167 (13%)
Query: 33 NNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIV-----RSSPIEIQYLIG 87
P+ +Y L T S R ++ I P + + I + S E +Y
Sbjct: 161 AEPMQVYSLQIGTPEPNS-ARQVRPAIEMPSAPAVPDKPSIAILAFNNMSGDAEQEYFSD 219
Query: 88 SQWSDKLPRMIQLKLIANFENNGKI------STVVKPNQGIYADYQIISAIRSFEINIDR 141
D + + +L + N ++V + + Y + ++R +
Sbjct: 220 GISEDIITDLSKLSELHVIARNSSFVYKNVTASVPAMAKALGVRYVLEGSVR-------K 272
Query: 142 HCAIITMSLKIINAHDNSLVGQKVFHVEE----KLEKDNKLHFIQSL 184
+ ++ ++I+A + + F + ++ + + +L
Sbjct: 273 AGNRVRVTAQLIDASNGGHIWASRFDRDLTDIFAVQDELTQEIVAAL 319
>gi|218548461|ref|YP_002382252.1| hypothetical protein EFER_1089 [Escherichia fergusonii ATCC 35469]
gi|218356002|emb|CAQ88618.1| conserved hypothetical protein [Escherichia fergusonii ATCC 35469]
Length = 182
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 3/122 (2%)
Query: 26 LSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L + Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGKV 126
Query: 144 AI 145
+
Sbjct: 127 IV 128
>gi|15800811|ref|NP_286827.1| hypothetical protein Z1302 [Escherichia coli O157:H7 EDL933]
gi|15830290|ref|NP_309063.1| hypothetical protein ECs1036 [Escherichia coli O157:H7 str. Sakai]
gi|12514134|gb|AAG55438.1|AE005285_5 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
gi|13360496|dbj|BAB34459.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
gi|209774488|gb|ACI85556.1| hypothetical protein ECs1036 [Escherichia coli]
gi|209774490|gb|ACI85557.1| hypothetical protein ECs1036 [Escherichia coli]
gi|209774492|gb|ACI85558.1| hypothetical protein ECs1036 [Escherichia coli]
gi|209774494|gb|ACI85559.1| hypothetical protein ECs1036 [Escherichia coli]
gi|209774496|gb|ACI85560.1| hypothetical protein ECs1036 [Escherichia coli]
Length = 182
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 39/122 (31%), Gaps = 3/122 (2%)
Query: 26 LSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQ 83
L+ C N Y L + Q + L + + L ++ ++S ++
Sbjct: 8 LAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVYQTSDVKYV 67
Query: 84 YLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHC 143
+ W+ L + ++ L+AN V G D + + F D
Sbjct: 68 IANNNLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEFNGRYDGKV 126
Query: 144 AI 145
+
Sbjct: 127 IV 128
>gi|15842988|ref|NP_338025.1| hypothetical protein MT3502 [Mycobacterium tuberculosis CDC1551]
gi|13883328|gb|AAK47839.1| hypothetical protein MT3502 [Mycobacterium tuberculosis CDC1551]
Length = 227
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 52 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 93
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 94 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLIDGMDLVVLG 152
>gi|260428120|ref|ZP_05782099.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260422612|gb|EEX15863.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 186
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 21/180 (11%), Positives = 60/180 (33%), Gaps = 8/180 (4%)
Query: 20 VLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSP 79
+ L++C Y + + S + L + + + +I++
Sbjct: 9 LPFALILAACGAEPR----YLIDPPVQSGTSRLQVATLEVMDVSLPAYAEASEILLEGED 64
Query: 80 IEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINI 139
+ + + W+D R + L + + V + D Q + +
Sbjct: 65 GALTQVDNALWADDSRRAVTLAIAEQIGRASS-AAVAPEPWPLEEDAQAQVHVSV-SRMV 122
Query: 140 DRHCAIITMSLKIINAHDNSLVGQKV--FHVEEKLEKDNKLHFIQSLNRAFSRISSEIID 197
R +++ + + + +V +++ F + + + Q+ A + +SS+I
Sbjct: 123 ARANGTLSLDGQFAVSSYDRVVRERIQRFAITVPMASADPAGIAQATGAAIAELSSQITA 182
>gi|289810598|ref|ZP_06541227.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 148
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 26/151 (17%), Positives = 63/151 (41%), Gaps = 9/151 (5%)
Query: 47 YDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANF 106
+ Q + L + + L ++ ++S ++ + W+ L + ++ L+AN
Sbjct: 5 QSTASQGNRLLWVEQVSVPDYLAGNGVVYQTSDVQYVIANNNLWASPLDQQLRNTLVANL 64
Query: 107 ENNGKIST--VVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQK 164
+ ++ V G D + + F D + +S + + H+ L+ ++
Sbjct: 65 --SARLPGWVVASQPLGTTQD-TLNVTVTGFHGRYDGK---VIVSGEWLLNHNGQLI-KR 117
Query: 165 VFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
FH+E +KD ++ L A+S+ ++ I
Sbjct: 118 PFHIEASQQKDGYDEMVKVLASAWSQEAAAI 148
>gi|227115413|ref|ZP_03829069.1| putative lipoprotein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 214
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 27/197 (13%), Positives = 66/197 (33%), Gaps = 19/197 (9%)
Query: 14 ISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDE-------SVQRHIQLIITEPITEK 66
++ L++ + LS+C + LT ++ + + +
Sbjct: 4 VALLLSITVIALLSACSSPPVRYHT-LLTPASPVATLSFMANTTHAAPFFIDVLPVGVPA 62
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFE---NNGKISTVVKPNQGIY 123
L++ I++R L +W L I+ L A+ N +S +V+
Sbjct: 63 QLDTSQIVIRQGDSGAVVLDNERWLSPLSEEIRTALSADLTQRLNTQDVSGLVRSADTPV 122
Query: 124 ADYQIISAIRSFEINIDRH---CAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+I +R F+ + A ++S L+ + F +
Sbjct: 123 --VRIHLQVRRFDSWPGQSVMFEADWSLSAVGEEDERARLLCRSQFTEQAANSDT---AM 177
Query: 181 IQSLNRAFSRISSEIID 197
+++ + +R++ +I
Sbjct: 178 LRAQQQVITRLAEQIAA 194
>gi|254366008|ref|ZP_04982053.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
gi|134151521|gb|EBA43566.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
Haarlem]
Length = 205
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 29 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 70
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 71 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLIDGMDLVVLG 129
>gi|270261230|ref|ZP_06189503.1| putative lipoprotein [Serratia odorifera 4Rx13]
gi|270044714|gb|EFA17805.1| putative lipoprotein [Serratia odorifera 4Rx13]
Length = 185
Score = 36.5 bits (83), Expect = 2.1, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 67/185 (36%), Gaps = 14/185 (7%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIY-DLTESTKYDE--SVQRHIQLIITEPITEKILNSEDII 74
+ V L LS+C + P Y L + + QL + L ++
Sbjct: 5 IPVALALLLSACS--STPQKTYYQLPALGEAAPVSTGAATRQLWLEHVSVADYLAQNGVV 62
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIST--VVKPNQGIYADYQIISAI 132
+++ ++ + W+ L + +Q L+ N +G + V D + +
Sbjct: 63 YQTNDVQYVIAQNNLWASPLDQQLQQTLVTNL--SGALPGWVVSSQPMSSEQDV-LNVTV 119
Query: 133 RSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRIS 192
F D AII + + + + ++ F +E K +D +++L + + + +
Sbjct: 120 SGFHGRFDGK-AIIRGEWVLNHQGN---LTKRPFSLELKQGEDGYDALVRTLAQGWQQEA 175
Query: 193 SEIID 197
I
Sbjct: 176 QAIAS 180
>gi|253990226|ref|YP_003041582.1| hypothetical protein PAU_02749 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253781676|emb|CAQ84839.1| conserved hypothetical protein [Photorhabdus asymbiotica]
Length = 187
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 45/129 (34%), Gaps = 5/129 (3%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTE---STKYDESVQRHIQLIITEPITEKILNSEDII 74
LA++L +S+C Y L +++ ++Q QL + + L+S ++
Sbjct: 5 LALILVIFISACSNQPE-KTYYQLPTVKIASQNSAAIQHDRQLWVQRIMLSDYLSSSGVV 63
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+SS + W+ L + +Q L+A V D + I
Sbjct: 64 YQSSDVSYISAANHLWAGPLEQQLQQVLVAELTMALPQRLVSAQPLVNKPD-TLDVTITG 122
Query: 135 FEINIDRHC 143
F D
Sbjct: 123 FHGRYDGKV 131
>gi|220934669|ref|YP_002513568.1| protein of unknown function DUF330 [Thioalkalivibrio sp. HL-EbGR7]
gi|219995979|gb|ACL72581.1| protein of unknown function DUF330 [Thioalkalivibrio sp. HL-EbGR7]
Length = 218
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 21/155 (13%), Positives = 47/155 (30%), Gaps = 4/155 (2%)
Query: 2 DKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTESTKYDESVQRHIQLIIT 60
L ++++ + LA L S+ PV + + + L+I
Sbjct: 4 RSLLTRLVQTMLTMALLAGLSACSVGVDLQRPAPVKQTFLIELQRDNILAPATAPSLVIA 63
Query: 61 EPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQ 120
++ R + +QW + + + V+ P
Sbjct: 64 PVRMASAYEGRALVYRMQDDRFESDYYNQWFTAPRDQLGEAVAYWMRRGSVFADVLPPTL 123
Query: 121 GIYADYQIISAIRSFEI---NIDRHCAIITMSLKI 152
ADY++ + F + + H A +T+ +
Sbjct: 124 AGEADYRLDLVVTDFYVDMRDAADHRARVTLQAYL 158
>gi|153949869|ref|YP_001401513.1| lipoprotein [Yersinia pseudotuberculosis IP 31758]
gi|170024862|ref|YP_001721367.1| hypothetical protein YPK_2637 [Yersinia pseudotuberculosis YPIII]
gi|152961364|gb|ABS48825.1| putative lipoprotein [Yersinia pseudotuberculosis IP 31758]
gi|169751396|gb|ACA68914.1| protein of unknown function DUF330 [Yersinia pseudotuberculosis
YPIII]
Length = 192
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 67/188 (35%), Gaps = 14/188 (7%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTE--------STKYDESVQRHIQLIITEPITEKILN 69
+AV++ LS+C + Y L + S QL + L
Sbjct: 5 MAVIVALLLSACSSETS-KTYYQLPALNQLPALNAPATVSSSVASRQLWVEHVSVADYLA 63
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
+ ++ +++ ++ + W+ L + +Q L+ N + V D +
Sbjct: 64 AVGVVYQTNDVQYVIANNNLWASPLDQQLQQTLVTNLSYSLPEWLVSAQPLDSDQDV-LN 122
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ F D A+I + I+ + ++ F++E K +D +++L +
Sbjct: 123 VTVTGFHGRYDGR-AVIR-GVWILKHQGQLI--KQPFNLELKQSEDGYDALVRTLAEGWQ 178
Query: 190 RISSEIID 197
+ + I
Sbjct: 179 QEAKTIAA 186
>gi|218885149|ref|YP_002434470.1| hypothetical protein DvMF_0041 [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756103|gb|ACL07002.1| protein of unknown function DUF330 [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 197
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 52/168 (30%), Gaps = 16/168 (9%)
Query: 25 SLSSCFFHNNPVNIYDLTESTKYD-ESVQRHIQLIITE-PITEKI-LNSEDIIVRSSPIE 81
LS C + Y L+ S D SV Q + P++ L+ I+ R
Sbjct: 13 LLSGCAGSSAATRFYLLSPSAPGDIRSVPGAPQARVAVGPVSVPSYLDRPQIVTREGDGV 72
Query: 82 IQYLIG-SQWSDK----LPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFE 136
L +W++ LPR++ + + AD ++ + +
Sbjct: 73 RLALAEFDRWAEPLAESLPRVLAEDISRALGGGHVLVFPGASAD--DADIRVAVDVNRMD 130
Query: 137 INIDRHCAIITMSL--KIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQ 182
++ + + +++ +L ++ D+
Sbjct: 131 GSLGG---TVVLDAWWALLDRSGATLRRGRMVE-RRPAGGDHAAMVTA 174
>gi|302671446|ref|YP_003831406.1| hypothetical protein bpr_I2091 [Butyrivibrio proteoclasticus B316]
gi|302395919|gb|ADL34824.1| hypothetical protein bpr_I2091 [Butyrivibrio proteoclasticus B316]
Length = 1042
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 29/52 (55%)
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+ L+ + D +P ++Q + + + ++G++ TV++P + + DY++
Sbjct: 102 PQENVLTVLVDGEPHDVIPEILQNREVQRYNDHGQLETVLEPVEPLSCDYRL 153
>gi|26246973|ref|NP_753013.1| hypothetical protein c1088 [Escherichia coli CFT073]
gi|26107373|gb|AAN79556.1|AE016758_160 Hypothetical protein ymbA [Escherichia coli CFT073]
Length = 187
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 41/130 (31%), Gaps = 3/130 (2%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTEST--KYDESVQRHIQLIITEPITEKILNSEDIIV 75
L + L+ C N Y L + Q + L + + L ++
Sbjct: 5 LVTIAALWLAGCSSGEINKNYYQLPVVQSGTQSTASQGNRLLWVEQVAVPDYLAGNGVVY 64
Query: 76 RSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF 135
++S ++ + W+ L + ++ L+AN V G D + + F
Sbjct: 65 QTSDVKYVIAXXTLWASPLDQQLRNTLVANLSTQLPGWVVASQPLGSAQD-TLNVTVTEF 123
Query: 136 EINIDRHCAI 145
D +
Sbjct: 124 NGRYDGKVIV 133
>gi|308406147|ref|ZP_07495287.2| hypothetical protein TMLG_02984 [Mycobacterium tuberculosis
SUMu012]
gi|308364341|gb|EFP53192.1| hypothetical protein TMLG_02984 [Mycobacterium tuberculosis
SUMu012]
Length = 233
Score = 36.5 bits (83), Expect = 2.4, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 85 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 126
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 127 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLIDGMDLVVLG 185
>gi|299067839|emb|CBJ39050.1| conserved exported protein of unknown function [Ralstonia
solanacearum CMR15]
Length = 209
Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 48/142 (33%), Gaps = 1/142 (0%)
Query: 6 NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITE 65
+ + + + + +C ++ L + E+ ++
Sbjct: 1 MRANRSSFLRLAGVAGAAALVGACASPEPTLHTLSLRAAAPAPEAAHIQRAFRLSGVRVP 60
Query: 66 KILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD 125
+ L+ I++R+S ++Q L +W+ ++ L A + V
Sbjct: 61 ERLDKPQIVLRTSDSQVQELEQQRWAAPFGSELRDALSAELADGLAAVDVGGATAPAGVP 120
Query: 126 -YQIISAIRSFEINIDRHCAII 146
Y+I + ++ F+ R + +
Sbjct: 121 LYRISADVQRFDARPAREVSAL 142
>gi|22126624|ref|NP_670047.1| hypothetical protein y2746 [Yersinia pestis KIM 10]
gi|45440998|ref|NP_992537.1| putative lipoprotein protein [Yersinia pestis biovar Microtus str.
91001]
gi|108806714|ref|YP_650630.1| putative lipoprotein protein [Yersinia pestis Antiqua]
gi|108812716|ref|YP_648483.1| lipoprotein protein [Yersinia pestis Nepal516]
gi|145599545|ref|YP_001163621.1| lipoprotein protein [Yersinia pestis Pestoides F]
gi|149366679|ref|ZP_01888713.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162418601|ref|YP_001606464.1| putative lipoprotein [Yersinia pestis Angola]
gi|165924570|ref|ZP_02220402.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165938936|ref|ZP_02227489.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
gi|166010384|ref|ZP_02231282.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166211595|ref|ZP_02237630.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167400112|ref|ZP_02305630.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167419479|ref|ZP_02311232.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167424011|ref|ZP_02315764.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167470422|ref|ZP_02335126.1| putative lipoprotein [Yersinia pestis FV-1]
gi|218928570|ref|YP_002346445.1| putative lipoprotein [Yersinia pestis CO92]
gi|229841398|ref|ZP_04461557.1| putative lipoprotein protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229843504|ref|ZP_04463650.1| putative lipoprotein protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229903116|ref|ZP_04518229.1| putative lipoprotein protein [Yersinia pestis Nepal516]
gi|270486913|ref|ZP_06203987.1| putative lipoprotein [Yersinia pestis KIM D27]
gi|294503409|ref|YP_003567471.1| putative lipoprotein protein [Yersinia pestis Z176003]
gi|21959634|gb|AAM86298.1|AE013877_6 hypothetical protein y2746 [Yersinia pestis KIM 10]
gi|45435857|gb|AAS61414.1| putative lipoprotein protein [Yersinia pestis biovar Microtus str.
91001]
gi|108776364|gb|ABG18883.1| lipoprotein protein [Yersinia pestis Nepal516]
gi|108778627|gb|ABG12685.1| putative lipoprotein protein [Yersinia pestis Antiqua]
gi|115347181|emb|CAL20074.1| putative lipoprotein protein [Yersinia pestis CO92]
gi|145211241|gb|ABP40648.1| lipoprotein protein [Yersinia pestis Pestoides F]
gi|149291053|gb|EDM41128.1| putative lipoprotein [Yersinia pestis CA88-4125]
gi|162351416|gb|ABX85364.1| putative lipoprotein [Yersinia pestis Angola]
gi|165913083|gb|EDR31707.1| putative lipoprotein [Yersinia pestis biovar Orientalis str. IP275]
gi|165923630|gb|EDR40762.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990870|gb|EDR43171.1| putative lipoprotein [Yersinia pestis biovar Antiqua str. E1979001]
gi|166207366|gb|EDR51846.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962220|gb|EDR58241.1| putative lipoprotein [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050820|gb|EDR62228.1| putative lipoprotein [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167056860|gb|EDR66623.1| putative lipoprotein [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229678886|gb|EEO74989.1| putative lipoprotein protein [Yersinia pestis Nepal516]
gi|229689851|gb|EEO81912.1| putative lipoprotein protein [Yersinia pestis biovar Orientalis
str. India 195]
gi|229697764|gb|EEO87811.1| putative lipoprotein protein [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|262361452|gb|ACY58173.1| putative lipoprotein protein [Yersinia pestis D106004]
gi|262365014|gb|ACY61571.1| putative lipoprotein protein [Yersinia pestis D182038]
gi|270335417|gb|EFA46194.1| putative lipoprotein [Yersinia pestis KIM D27]
gi|294353868|gb|ADE64209.1| putative lipoprotein protein [Yersinia pestis Z176003]
gi|320015711|gb|ADV99282.1| putative lipoprotein protein [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 192
Score = 36.1 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 71/189 (37%), Gaps = 16/189 (8%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTE--------STKYDESVQRHIQLIITEPITEKILN 69
+AV++ LS+C + Y L + S QL + L
Sbjct: 5 MAVIVALLLSACSSETS-KTYYQLPALNQLPALNAPATVSSSVASRQLWVEHVSVADYLA 63
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADY-QI 128
+ ++ +++ ++ + W+ L + +Q L+ N + + + Q + +D +
Sbjct: 64 AVGVVYQTNDVQYVIANNNLWASPLDQQLQQTLVTNLSYS--LPGWLVSAQPLDSDQDVL 121
Query: 129 ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ F D A+I + I+ + ++ F++E K +D +++L +
Sbjct: 122 NVTVTGFHGRYDGR-AVIR-GVWILKHQGQLI--KQPFNLELKQSEDGYDALVRTLAEGW 177
Query: 189 SRISSEIID 197
+ + I
Sbjct: 178 QQEAKTIAA 186
>gi|309779666|ref|ZP_07674425.1| lipoprotein [Ralstonia sp. 5_7_47FAA]
gi|308921607|gb|EFP67245.1| lipoprotein [Ralstonia sp. 5_7_47FAA]
Length = 224
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 22/180 (12%), Positives = 60/180 (33%), Gaps = 20/180 (11%)
Query: 17 SLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVR 76
SL ++ PV Y + + + + + + ++V+
Sbjct: 33 SLLGADADGVAVSAPAQAPVRTYLVDV-----------VAVRVPPSVAGR-----RLVVQ 76
Query: 77 SSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTV-VKPNQGIYADYQIISAIRSF 135
+ ++ L +W+ + I+ L + + + P G Y++ ++ F
Sbjct: 77 AGSGQVDVLEMDRWASPVADEIRAALSSGLALQIRAMDLHGLPYDGRRPVYRVAVDVQRF 136
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ +I + A D L+ + + +K ++ RA ++S++
Sbjct: 137 DA-WRGSHVLIDAVWTMRTADDRQLLTCR--SIVQKSVSAGIDGVVEGHRRALKALASQM 193
>gi|170695536|ref|ZP_02886680.1| protein of unknown function DUF330 [Burkholderia graminis C4D1M]
gi|170139523|gb|EDT07707.1| protein of unknown function DUF330 [Burkholderia graminis C4D1M]
Length = 232
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 69/186 (37%), Gaps = 9/186 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLT---ESTKYDESVQRHIQLIITEPITEKILNSED 72
S+A++ +LS+C P Y L S++ + + + + +
Sbjct: 26 ASVALVALGALSACSSP--PSRFYTLAGGLASSEVRSAAPPLLMIDVAAVDVPAQVARSA 83
Query: 73 IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYAD-YQIISA 131
++V++S + L ++W+ I+L L V + + Y++ +
Sbjct: 84 LVVQTSATRVDVLEQARWASLPADEIRLALSQQLAQQLDAIDVSRSPRPAGVSVYRVKLS 143
Query: 132 IRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRI 191
++ FE A+I + + +++ + V E + + +A +I
Sbjct: 144 VQRFES-WPGSHALIDAVWSVRALSEEAVLTCRSV-VSEPV-GAGNDALVAGHRQALQQI 200
Query: 192 SSEIID 197
++ + D
Sbjct: 201 AANVAD 206
>gi|304397107|ref|ZP_07378986.1| protein of unknown function DUF330 [Pantoea sp. aB]
gi|304355256|gb|EFM19624.1| protein of unknown function DUF330 [Pantoea sp. aB]
Length = 189
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 30/188 (15%), Positives = 65/188 (34%), Gaps = 13/188 (6%)
Query: 15 SCSLAVLLCTSLSSCFFHNNPVNIYDLT--ESTKYDESVQRHIQ---LIITEPITEKILN 69
L L S S N Y L ++ S Q + L + + L
Sbjct: 4 GLILCAALVLSACSSSVDNT---WYQLPSGAASMQVSSSQLNEAQPMLWVQQVTVPDYLA 60
Query: 70 SEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQII 129
++ ++S ++ + W+ L + +Q LI N V G D +
Sbjct: 61 GNGLVYQTSDVKYVIATNNLWASPLDQQLQQTLITNLSKALPGRLVAGSPLGAQHD-TLN 119
Query: 130 SAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFS 189
+ F+ D AI++ + H + ++ F++ +D +++L +
Sbjct: 120 VTVTGFQGRYDGK-AIVSGEWTL--EHQGR-LTKQAFNLVLPQTEDGYDAMVRTLAAGWQ 175
Query: 190 RISSEIID 197
+ + +I +
Sbjct: 176 QTAQKIAN 183
>gi|302507140|ref|XP_003015531.1| hypothetical protein ARB_05842 [Arthroderma benhamiae CBS 112371]
gi|291179099|gb|EFE34886.1| hypothetical protein ARB_05842 [Arthroderma benhamiae CBS 112371]
Length = 1589
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 19/102 (18%), Positives = 29/102 (28%), Gaps = 18/102 (17%)
Query: 9 IKKKIISCSLAVLLCTSLSS-----CFFHNNPVNIYDLTE--STKYDESVQRHIQLIITE 61
+ + + C L S C P YDLT ++ I L I+
Sbjct: 358 LPPTLAEQLHSTFGCVVLPSYGMTECAPIAAPPLDYDLTRVGASGLPAGPDLAI-LDISR 416
Query: 62 PITEKILNSEDIIVR----------SSPIEIQYLIGSQWSDK 93
P + I VR + I+ + W D
Sbjct: 417 PSRVPTGATGRICVRGLPVFNGYLTPTGIDRSAFDAAGWFDT 458
>gi|213585592|ref|ZP_03367418.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
Length = 145
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 26/146 (17%), Positives = 62/146 (42%), Gaps = 9/146 (6%)
Query: 54 HIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKIS 113
+ L + + L ++ ++S ++ + W+ L + ++ L+AN + ++
Sbjct: 1 NRLLWVEQVSVPDYLAGNGVVYQTSDVQYVIANNNLWASPLDQQLRNTLVANL--SARLP 58
Query: 114 T--VVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEK 171
V G D + + F D + +S + + H+ L+ ++ FH+E
Sbjct: 59 GWVVASQPLGTTQD-TLNVTVTGFHGRYDGK---VIVSGEWLLNHNGQLI-KRPFHIEAS 113
Query: 172 LEKDNKLHFIQSLNRAFSRISSEIID 197
+KD ++ L A+S+ ++ I D
Sbjct: 114 QQKDGYDEMVKVLASAWSQEAAAIAD 139
>gi|326470083|gb|EGD94092.1| hypothetical protein TESG_01618 [Trichophyton tonsurans CBS 112818]
Length = 1293
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 18/102 (17%)
Query: 9 IKKKIISCSLAVLLCTSLSS-----CFFHNNPVNIYDLTE--STKYDESVQRHIQLIITE 61
+ + + C L S C P YDLT ++ I L I+
Sbjct: 97 LPPTLAEQLRSTFGCVVLPSYGMTECAPIAAPPLDYDLTRVGASGLPAGPDLAI-LDISL 155
Query: 62 PITEKILNSEDIIVR----------SSPIEIQYLIGSQWSDK 93
P I + I VR + I+ + W D
Sbjct: 156 PSRVPIGATGRICVRGLPVFNGYLTPTGIDRSAFDAAGWFDT 197
>gi|215428897|ref|ZP_03426816.1| hypothetical protein MtubT9_21933 [Mycobacterium tuberculosis T92]
gi|219559469|ref|ZP_03538545.1| hypothetical protein MtubT1_20037 [Mycobacterium tuberculosis T17]
gi|260188451|ref|ZP_05765925.1| hypothetical protein MtubCP_20837 [Mycobacterium tuberculosis
CPHL_A]
gi|260202528|ref|ZP_05770019.1| hypothetical protein MtubT4_21148 [Mycobacterium tuberculosis T46]
gi|289444949|ref|ZP_06434693.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289449092|ref|ZP_06438836.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289571631|ref|ZP_06451858.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289752112|ref|ZP_06511490.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
gi|289417868|gb|EFD15108.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
gi|289422050|gb|EFD19251.1| conserved hypothetical protein [Mycobacterium tuberculosis CPHL_A]
gi|289545385|gb|EFD49033.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
gi|289692699|gb|EFD60128.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
Length = 204
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 29 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 70
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 71 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLIDGMDLVVLG 129
>gi|215447723|ref|ZP_03434475.1| hypothetical protein MtubT_17920 [Mycobacterium tuberculosis T85]
gi|289759555|ref|ZP_06518933.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
gi|289715119|gb|EFD79131.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
Length = 204
Score = 35.7 bits (81), Expect = 3.5, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 29 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 70
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 71 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLIDGMDLVVLG 129
>gi|308380683|ref|ZP_07669251.1| hypothetical protein TMKG_03741 [Mycobacterium tuberculosis
SUMu011]
gi|308360730|gb|EFP49581.1| hypothetical protein TMKG_03741 [Mycobacterium tuberculosis
SUMu011]
Length = 820
Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 119 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 160
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 161 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLIDGMDLVVLG 219
>gi|57117102|ref|NP_217912.2| hypothetical protein Rv3395c [Mycobacterium tuberculosis H37Rv]
gi|148663258|ref|YP_001284781.1| hypothetical protein MRA_3434 [Mycobacterium tuberculosis H37Ra]
gi|148824603|ref|YP_001289356.1| hypothetical protein TBFG_13429 [Mycobacterium tuberculosis F11]
gi|167968720|ref|ZP_02550997.1| hypothetical protein MtubH3_12045 [Mycobacterium tuberculosis
H37Ra]
gi|215413301|ref|ZP_03421986.1| hypothetical protein Mtub9_18083 [Mycobacterium tuberculosis
94_M4241A]
gi|218755172|ref|ZP_03533968.1| hypothetical protein MtubG1_17904 [Mycobacterium tuberculosis GM
1503]
gi|253800441|ref|YP_003033442.1| hypothetical protein TBMG_03445 [Mycobacterium tuberculosis KZN
1435]
gi|254233996|ref|ZP_04927321.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|254552500|ref|ZP_05142947.1| hypothetical protein Mtube_18970 [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
gi|289555670|ref|ZP_06444880.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289763578|ref|ZP_06522956.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|294995832|ref|ZP_06801523.1| hypothetical protein Mtub2_15338 [Mycobacterium tuberculosis 210]
gi|297636056|ref|ZP_06953836.1| hypothetical protein MtubK4_18120 [Mycobacterium tuberculosis KZN
4207]
gi|297733056|ref|ZP_06962174.1| hypothetical protein MtubKR_18290 [Mycobacterium tuberculosis KZN
R506]
gi|298526877|ref|ZP_07014286.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|306777735|ref|ZP_07416072.1| hypothetical protein TMAG_03342 [Mycobacterium tuberculosis
SUMu001]
gi|306782462|ref|ZP_07420799.1| hypothetical protein TMBG_03863 [Mycobacterium tuberculosis
SUMu002]
gi|306786282|ref|ZP_07424604.1| hypothetical protein TMCG_02544 [Mycobacterium tuberculosis
SUMu003]
gi|306790652|ref|ZP_07428974.1| hypothetical protein TMDG_03139 [Mycobacterium tuberculosis
SUMu004]
gi|306795179|ref|ZP_07433481.1| hypothetical protein TMEG_03779 [Mycobacterium tuberculosis
SUMu005]
gi|306799370|ref|ZP_07437672.1| hypothetical protein TMFG_02962 [Mycobacterium tuberculosis
SUMu006]
gi|306805217|ref|ZP_07441885.1| hypothetical protein TMHG_03918 [Mycobacterium tuberculosis
SUMu008]
gi|306809402|ref|ZP_07446070.1| hypothetical protein TMGG_03873 [Mycobacterium tuberculosis
SUMu007]
gi|306969508|ref|ZP_07482169.1| hypothetical protein TMIG_03668 [Mycobacterium tuberculosis
SUMu009]
gi|306973853|ref|ZP_07486514.1| hypothetical protein TMJG_03581 [Mycobacterium tuberculosis
SUMu010]
gi|313660387|ref|ZP_07817267.1| hypothetical protein MtubKV_18285 [Mycobacterium tuberculosis KZN
V2475]
gi|27735281|sp|Q50730|Y3395_MYCTU RecName: Full=Uncharacterized protein Rv3395c/MT3502
gi|38490367|emb|CAA15780.2| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
gi|124599525|gb|EAY58629.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
gi|148507410|gb|ABQ75219.1| hypothetical protein MRA_3434 [Mycobacterium tuberculosis H37Ra]
gi|148723130|gb|ABR07755.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
gi|253321945|gb|ACT26548.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
1435]
gi|289440302|gb|EFD22795.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
gi|289711084|gb|EFD75100.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
gi|298496671|gb|EFI31965.1| conserved hypothetical protein [Mycobacterium tuberculosis
94_M4241A]
gi|308213911|gb|EFO73310.1| hypothetical protein TMAG_03342 [Mycobacterium tuberculosis
SUMu001]
gi|308324855|gb|EFP13706.1| hypothetical protein TMBG_03863 [Mycobacterium tuberculosis
SUMu002]
gi|308329111|gb|EFP17962.1| hypothetical protein TMCG_02544 [Mycobacterium tuberculosis
SUMu003]
gi|308332948|gb|EFP21799.1| hypothetical protein TMDG_03139 [Mycobacterium tuberculosis
SUMu004]
gi|308336507|gb|EFP25358.1| hypothetical protein TMEG_03779 [Mycobacterium tuberculosis
SUMu005]
gi|308340384|gb|EFP29235.1| hypothetical protein TMFG_02962 [Mycobacterium tuberculosis
SUMu006]
gi|308344243|gb|EFP33094.1| hypothetical protein TMGG_03873 [Mycobacterium tuberculosis
SUMu007]
gi|308348233|gb|EFP37084.1| hypothetical protein TMHG_03918 [Mycobacterium tuberculosis
SUMu008]
gi|308352959|gb|EFP41810.1| hypothetical protein TMIG_03668 [Mycobacterium tuberculosis
SUMu009]
gi|308356781|gb|EFP45632.1| hypothetical protein TMJG_03581 [Mycobacterium tuberculosis
SUMu010]
gi|323717881|gb|EGB27070.1| hypothetical protein TMMG_03560 [Mycobacterium tuberculosis
CDC1551A]
gi|326905238|gb|EGE52171.1| hypothetical protein TBPG_03178 [Mycobacterium tuberculosis W-148]
gi|328460173|gb|AEB05596.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
4207]
Length = 204
Score = 35.7 bits (81), Expect = 3.6, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 29 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 70
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 71 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLIDGMDLVVLG 129
>gi|326482648|gb|EGE06658.1| hypothetical protein TEQG_05656 [Trichophyton equinum CBS 127.97]
Length = 1592
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 18/102 (17%)
Query: 9 IKKKIISCSLAVLLCTSLSS-----CFFHNNPVNIYDLTE--STKYDESVQRHIQLIITE 61
+ + + C L S C P YDLT ++ I L I+
Sbjct: 361 LPPTLAEQLRSTFGCVVLPSYGMTECAPIAAPPLDYDLTRVGASGLPAGPDLAI-LDISL 419
Query: 62 PITEKILNSEDIIVR----------SSPIEIQYLIGSQWSDK 93
P I + I VR + I+ + W D
Sbjct: 420 PSRVPIGATGRICVRGLPVFNGYLTPTGIDRSAFDAAGWFDT 461
>gi|310816750|ref|YP_003964714.1| lipoprotein, putative [Ketogulonicigenium vulgare Y25]
gi|308755485|gb|ADO43414.1| lipoprotein, putative [Ketogulonicigenium vulgare Y25]
Length = 186
Score = 35.7 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 20/185 (10%), Positives = 53/185 (28%), Gaps = 8/185 (4%)
Query: 16 CSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLI-ITEPITEKILNSEDII 74
+ +L++C +Y D+ + + E + + DI
Sbjct: 3 ALIPFAALMALAACSSPT----LYTAEAPVPLDQRASIAFSTVEVAELSLPRYASGPDIY 58
Query: 75 VRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRS 134
+ + + G W+D + L+ + + Q+ +R
Sbjct: 59 SEGAGGALTAMSGVNWADDPAPAMTASLVQVLTGMTGAR-IAAEPWPFRSFPQVRVEVRV 117
Query: 135 FEINIDRHCAIITMSLKIINA-HDNSLVGQKVFHVEEKL-EKDNKLHFIQSLNRAFSRIS 192
+ + + + I D + F V+ + + + + A + +
Sbjct: 118 TTMVARENAGFVMIGQYYIAGQEDGLRERARPFAVQIPMRDGYDAADIAAARGLAVAELG 177
Query: 193 SEIID 197
+II
Sbjct: 178 RQIIA 182
>gi|225076077|ref|ZP_03719276.1| hypothetical protein NEIFLAOT_01109 [Neisseria flavescens
NRL30031/H210]
gi|224952576|gb|EEG33785.1| hypothetical protein NEIFLAOT_01109 [Neisseria flavescens
NRL30031/H210]
Length = 172
Score = 35.7 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 62/188 (32%), Gaps = 17/188 (9%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C + S + P + Y + + +V+ ++ EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTAQSTQYFVLPDSQYIRPAAHSNEIAVKVNL----AEPLANGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+ ++ + W+ L + L T V P + +
Sbjct: 57 -----VYQTDAYHVNLAKNHLWAAPLDGALAANLSNKLNRLNPHRTFV-PASRSQSSQTL 110
Query: 129 ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
I +F+ + I + D K F+ + D ++SL
Sbjct: 111 KVYIEAFQGSYQGQTTISGYA----QWPDGR---SKPFNAVTPQQSDGYTAMLESLENGL 163
Query: 189 SRISSEII 196
S+++ I+
Sbjct: 164 SQVADTIV 171
>gi|167946023|ref|ZP_02533097.1| hypothetical protein Epers_05537 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 158
Score = 35.7 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 15/113 (13%), Positives = 35/113 (30%), Gaps = 3/113 (2%)
Query: 68 LNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPN--QGIYAD 125
L+ I+VR+ P ++ +W+ L ++ L + E + V+ +
Sbjct: 18 LDRPQILVRNGPHRLELNEFDRWAGPLQENLRSVLSRSLEQHFGAEQVIVAPWHDALRPA 77
Query: 126 YQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKL 178
Y++ I + + + LV + E +
Sbjct: 78 YELSLQIDQLDATQAGDL-TLRGRWTLYAPAGRQLVALGRISLREAIAGAGAD 129
>gi|295701083|ref|YP_003608976.1| hypothetical protein BC1002_5540 [Burkholderia sp. CCGE1002]
gi|295440296|gb|ADG19465.1| protein of unknown function DUF330 [Burkholderia sp. CCGE1002]
Length = 207
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 28/219 (12%), Positives = 69/219 (31%), Gaps = 27/219 (12%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPV-NIYDLTESTKYD-ESVQRHIQLI 58
M + + + + ++L + + +P N Y L+ R I +
Sbjct: 1 MTDAMARFSARFSGRLTACLMLALAGALLGACKSPATNFYTLSPDESLSGTGASRPIAAV 60
Query: 59 ITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDK------------LPRMIQLKLIANF 106
I +I++ I+ R E++ +W+ L ++ + I+ F
Sbjct: 61 IGPVTIPEIVDRPQIVTRIGNNEVEVNEFDRWAQPLGGDIGRVIAADLGALLNSQQISVF 120
Query: 107 ENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVF 166
+ V+ + +++ + FE R + + +
Sbjct: 121 DA-------VRDPSVV---WRVRIDVMRFESVPGRDVTVDVLWA--VRPPGKIRAVTGRS 168
Query: 167 HVEEKLEKDNKLHFIQSLNRAFSRISSEIIDWTLSSLPL 205
E + I + +RA + +S +I + + P
Sbjct: 169 VARESVSGPGFEPIIAAHDRALASVSRDIAA-AVQANPS 206
>gi|215432361|ref|ZP_03430280.1| hypothetical protein MtubE_17289 [Mycobacterium tuberculosis
EAS054]
gi|289755524|ref|ZP_06514902.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
gi|289696111|gb|EFD63540.1| conserved hypothetical protein [Mycobacterium tuberculosis EAS054]
Length = 205
Score = 35.3 bits (80), Expect = 4.5, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 29 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 70
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 71 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAVIPDPGTDPVEVAAVLIDGMDLVVLG 129
>gi|297570363|ref|YP_003691707.1| Curli production assembly/transport component CsgG [Desulfurivibrio
alkaliphilus AHT2]
gi|296926278|gb|ADH87088.1| Curli production assembly/transport component CsgG [Desulfurivibrio
alkaliphilus AHT2]
Length = 247
Score = 35.3 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 8/81 (9%), Positives = 26/81 (32%), Gaps = 12/81 (14%)
Query: 137 INIDRHCAIITMSLKIINAHDNSLVG-------QKVFHVEEKLEKDNKLHFIQSL----- 184
+ A + + L++++ ++ + F + + +
Sbjct: 161 LTAGVQQAHVALDLRVVDTATGRILSATNVEGKARSFDLGGSAFGSQGSGGLSTFARTPM 220
Query: 185 NRAFSRISSEIIDWTLSSLPL 205
+A R +E +D+ + P
Sbjct: 221 EQAIRRAIAEAVDFVVEQTPA 241
>gi|281357013|ref|ZP_06243503.1| hypothetical protein Vvad_PD1531 [Victivallis vadensis ATCC
BAA-548]
gi|281316571|gb|EFB00595.1| hypothetical protein Vvad_PD1531 [Victivallis vadensis ATCC
BAA-548]
Length = 185
Score = 35.3 bits (80), Expect = 4.6, Method: Composition-based stats.
Identities = 22/145 (15%), Positives = 46/145 (31%), Gaps = 20/145 (13%)
Query: 14 ISCSLAVLLCTSLSSCFFH----NNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILN 69
+ + +L L C PV+ +DL + + +
Sbjct: 4 MRLLMLPMLVLGLGGCVLMGPSYTEPVD-FDLGVPA-AEAVKPAALPIRFGVFRNLSG-- 59
Query: 70 SED-IIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
S +VR S + ++W ++Q + + + P + ++
Sbjct: 60 SNRGFLVRESGDRLSSDEYNRWLLSPELLLQRR---------IRTELPDPAGEMGKSVRL 110
Query: 129 ISAIRSFEINIDRHCAI--ITMSLK 151
+ I FE + RH A+ + S K
Sbjct: 111 NATIYRFEFDRARHTAVLSVEFSGK 135
>gi|31794575|ref|NP_857068.1| hypothetical protein Mb3427c [Mycobacterium bovis AF2122/97]
gi|121639319|ref|YP_979543.1| hypothetical protein BCG_3464c [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224991816|ref|YP_002646505.1| hypothetical protein JTY_3464 [Mycobacterium bovis BCG str. Tokyo
172]
gi|260206761|ref|ZP_05774252.1| hypothetical protein MtubK8_20941 [Mycobacterium tuberculosis K85]
gi|289576127|ref|ZP_06456354.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
gi|31620172|emb|CAD95615.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
gi|121494967|emb|CAL73453.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|224774931|dbj|BAH27737.1| hypothetical protein JTY_3464 [Mycobacterium bovis BCG str. Tokyo
172]
gi|289540558|gb|EFD45136.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
Length = 204
Score = 35.3 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 42/119 (35%), Gaps = 18/119 (15%)
Query: 44 STKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLI 103
S K R L+ P V P + L G++ ++ +
Sbjct: 29 SEKVSGGPSRSGDLVPAGP------------VSLPPGTVGVLSGAR------SLLLSMVA 70
Query: 104 ANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ G + V +P+ G+ A ++ + + + D + ++ +I+ D ++G
Sbjct: 71 SVTAAGGNAAIVGQPDIGLLAAVEMGADLSRLAMIPDPGTDPVEVAAVLIDGMDLVVLG 129
>gi|254428600|ref|ZP_05042307.1| conserved hypothetical protein [Alcanivorax sp. DG881]
gi|196194769|gb|EDX89728.1| conserved hypothetical protein [Alcanivorax sp. DG881]
Length = 169
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 29/176 (16%), Positives = 59/176 (33%), Gaps = 23/176 (13%)
Query: 13 IISCSLAVLLCTSLSSCF--FHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNS 70
+I + T L +C +P Y L +T S L I + LN
Sbjct: 1 MIRLLAIAAILTGLWACSHAPATSPPG-YLLPSATGAAHSP-----LTIKVHLAS-YLNR 53
Query: 71 EDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIIS 130
I+++ S EIQ +W++ L +Q L + + +
Sbjct: 54 GGIVMQLSDSEIQVGRHHRWAEPLATQLQRSL--------EARMPSGDEK------TLTV 99
Query: 131 AIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ F+ + ++ + +N V Q E L+ + +++L++
Sbjct: 100 ELTRFQGLQGKDRDSAVITGRWALTGNNGEVTQGRIQWEAALDNGGYANLVRTLDQ 155
>gi|332037636|gb|EGI74088.1| hypothetical protein PH505_ak00740 [Pseudoalteromonas haloplanktis
ANT/505]
Length = 202
Score = 35.3 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 25/158 (15%), Positives = 47/158 (29%), Gaps = 11/158 (6%)
Query: 39 YDLTESTKYDES--VQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPR 96
Y + QL I + LN+ I ++ +I + W +
Sbjct: 28 YQFEQPIGASSRNVADTDAQLRIQTVVLRGALNNLGIAMKIDSNQIHAANYNLWGESPDV 87
Query: 97 MI----QLKLIANFENNGKIST-VVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLK 151
M+ Q L N I V Y++ I F ++ + A I+ +
Sbjct: 88 MLTATAQQTLFNAMPNWMVIKGLPVITELDQQTFYELEYEIHHFNGDMQGN-ADISGLWR 146
Query: 152 IINAH---DNSLVGQKVFHVEEKLEKDNKLHFIQSLNR 186
+ H L+ F ++ D + +L
Sbjct: 147 LYYTHPETGRRLISIHNFSNLVPIDDDGYDGLVSTLEA 184
>gi|293189671|ref|ZP_06608388.1| bacterial extracellular solute-binding protein, family 5
[Actinomyces odontolyticus F0309]
gi|292821409|gb|EFF80351.1| bacterial extracellular solute-binding protein, family 5
[Actinomyces odontolyticus F0309]
Length = 529
Score = 34.9 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 26/66 (39%), Gaps = 11/66 (16%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
+ +I + S+A ++C +L++C + +S R + + P +
Sbjct: 3 IARIPRTAATLASVAAMMCATLAACAPSG-----------SGAAQSASREGTIAVGLPGS 51
Query: 65 EKILNS 70
L++
Sbjct: 52 LSTLDT 57
>gi|241759877|ref|ZP_04757977.1| lipoprotein [Neisseria flavescens SK114]
gi|241319885|gb|EER56281.1| lipoprotein [Neisseria flavescens SK114]
Length = 172
Score = 34.9 bits (79), Expect = 6.1, Method: Composition-based stats.
Identities = 25/188 (13%), Positives = 61/188 (32%), Gaps = 17/188 (9%)
Query: 9 IKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKIL 68
++ I+ +L + C + S + P + Y + + +V+ ++ EP+ L
Sbjct: 1 MRLFPIAAALTLAACGTAQSTQYFVLPDSQYIRPAAHGNEIAVKVNL----AEPLANGGL 56
Query: 69 NSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQI 128
+ ++ + W+ L + T V P + +
Sbjct: 57 -----VYQTDAYHVNLAKNHLWAAPLDGALAANFSNKLNRLNPRHTFV-PASRSQSSQTL 110
Query: 129 ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+ +F+ + + +L D K F+ + D ++SL
Sbjct: 111 KIYVEAFQGSYQGQTTVSGYAL----WPDGR---SKPFNAVTPQQGDGYTAMLESLENGL 163
Query: 189 SRISSEII 196
S+++ I
Sbjct: 164 SQVADTIA 171
>gi|218296318|ref|ZP_03497074.1| hypothetical protein TaqDRAFT_3768 [Thermus aquaticus Y51MC23]
gi|218243390|gb|EED09920.1| hypothetical protein TaqDRAFT_3768 [Thermus aquaticus Y51MC23]
Length = 225
Score = 34.9 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 66/177 (37%), Gaps = 34/177 (19%)
Query: 11 KKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEP-ITEKILN 69
+ + + L +L L C + S+ + +Q+ P T +++
Sbjct: 7 RGVRTSFLMLLFGALLVGCVPQA---------ATPTTPGSLPQTVQIRYDGPRETVAVID 57
Query: 70 SEDIIVRSSPIEIQYLI--------GSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQG 121
+ +I + SP++ ++L + D+ + ++KL + + + P
Sbjct: 58 TTNIRLSGSPLKERFLAILTEELIVHPYFKDRFSLVERVKLDQVLKEQRLSAAGLSPTDA 117
Query: 122 ------IYADYQIISAIR----------SFEINIDRHCAIITMSLKIINAHDNSLVG 162
+ A Y +++++ + I ID + ++L ++++ + ++
Sbjct: 118 PRIGKLLGARYLLLASVVNAKTSRRSTGALGIRIDEVQGTVEVALSLVDSENGRVLA 174
>gi|297161218|gb|ADI10930.1| cytochrome c oxidase subunit II [Streptomyces bingchenggensis
BCW-1]
Length = 320
Score = 34.9 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 2 DKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLI 58
D+ + +++K++ A L+ + + C + P L T E R + L
Sbjct: 7 DRSSRRPVRRKLLQALAAGLVLATATGCTSKDFP----RLGMPTPVTEEAPRILSLW 59
>gi|187927629|ref|YP_001898116.1| hypothetical protein Rpic_0529 [Ralstonia pickettii 12J]
gi|187724519|gb|ACD25684.1| conserved hypothetical protein [Ralstonia pickettii 12J]
Length = 222
Score = 34.9 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 18/144 (12%), Positives = 49/144 (34%), Gaps = 3/144 (2%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPI 63
+ + + + L + +C ++ L+ + ++ + ++
Sbjct: 3 PMQTTMLSFSLRVAGGAALALLVGACASPEPTLHT--LSARPEATDTSRFQRAFRLSGVR 60
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
L+ I++R+S E+ L +W+ ++ L AN V
Sbjct: 61 VPDRLDKPQIVLRTSDSEVVALEQQRWAAPFGSELRDALSANLAATLSAVDVGGAAAPAG 120
Query: 124 AD-YQIISAIRSFEINIDRHCAII 146
Y+I + +RS++ + +
Sbjct: 121 VPLYRIGAEMRSYDARPGQGVTAL 144
>gi|300767805|ref|ZP_07077715.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
gi|300494790|gb|EFK29948.1| serine-type D-Ala-D-Ala carboxypeptidase [Lactobacillus plantarum
subsp. plantarum ATCC 14917]
Length = 264
Score = 34.9 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 31/75 (41%)
Query: 1 MDKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIIT 60
M K +++K+ ++ V L L+ C + S K ++ + +LI
Sbjct: 1 MRKAAREMLKRNLLRGLALVSLAGVLAGCGASQLTSKATSSSTSAKSTKTQTKRQRLISA 60
Query: 61 EPITEKILNSEDIIV 75
P K +S+ ++V
Sbjct: 61 LPKGVKSTDSDLVVV 75
>gi|307332171|ref|ZP_07611256.1| cytochrome c oxidase, subunit II [Streptomyces violaceusniger Tu
4113]
gi|306882200|gb|EFN13301.1| cytochrome c oxidase, subunit II [Streptomyces violaceusniger Tu
4113]
Length = 320
Score = 34.6 bits (78), Expect = 7.7, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 23/57 (40%), Gaps = 4/57 (7%)
Query: 2 DKKLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLI 58
D+ + +++K++ A L+ + + C + P L T E R + L
Sbjct: 7 DRSSRRPVRRKLLQALAAGLVLVTATGCTSKDFP----RLGMPTPVTEEAPRILSLW 59
>gi|154509316|ref|ZP_02044958.1| hypothetical protein ACTODO_01841 [Actinomyces odontolyticus ATCC
17982]
gi|153798950|gb|EDN81370.1| hypothetical protein ACTODO_01841 [Actinomyces odontolyticus ATCC
17982]
Length = 529
Score = 34.6 bits (78), Expect = 7.8, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 25/66 (37%), Gaps = 11/66 (16%)
Query: 5 LNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPIT 64
+ +I + S+A ++C +L++C +S R + + P +
Sbjct: 3 IARIPRTAATLASVAAMMCATLAACAPSGG-----------GAAQSASREGTIAVGLPGS 51
Query: 65 EKILNS 70
L++
Sbjct: 52 LSTLDT 57
>gi|237807052|ref|YP_002891492.1| hypothetical protein Tola_0276 [Tolumonas auensis DSM 9187]
gi|237499313|gb|ACQ91906.1| protein of unknown function DUF330 [Tolumonas auensis DSM 9187]
Length = 197
Score = 34.6 bits (78), Expect = 7.9, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 65/178 (36%), Gaps = 13/178 (7%)
Query: 24 TSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKI--LNSEDIIVRSSPIE 81
LS+C P Y + + ++ Q ++ E L+S I+ + ++
Sbjct: 14 CGLSACSTATAP-QYYAIALPDEQSGTLSASQQPVVAVSDVELADYLSSIGIVYQQDDVQ 72
Query: 82 IQYLIGSQWSDKLPRMIQLKLIANFEN---NGKISTVVKPNQGIYADYQIISAIRSFEIN 138
+ +W++ L + + L+ N + + Q I Q+ IR F
Sbjct: 73 LTTANQHRWAEALDKQLTRALLQNLRQQLPDWQWQNGQMAGQNIA---QLQVKIRGFHGK 129
Query: 139 IDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEII 196
D H A+I+ ++N GQ F L D ++ L + + +S++
Sbjct: 130 ADGH-AVIS-GEWVLNTGKQQYSGQ--FQQLYPLTADGYPALVRELRTGWQQTTSQLA 183
>gi|221632901|ref|YP_002522123.1| putative ABC transporter substrate-binding protein
[Thermomicrobium roseum DSM 5159]
gi|221156580|gb|ACM05707.1| putative ABC transporter substrate-binding protein
[Thermomicrobium roseum DSM 5159]
Length = 396
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 9/69 (13%), Positives = 22/69 (31%), Gaps = 2/69 (2%)
Query: 1 MDKKL--NKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLI 58
MD+ + + + +I S + + LS+C + P + +
Sbjct: 6 MDRAMITRRHFFQGLIGASTFAFIGSLLSACGSNQEPTRTTVPSTPAFTPATGTSPSPTA 65
Query: 59 ITEPITEKI 67
+ P +
Sbjct: 66 VPSPTSAAT 74
>gi|71662697|ref|XP_818351.1| dispersed gene family protein 1 (DGF-1) [Trypanosoma cruzi strain CL
Brener]
gi|70883598|gb|EAN96500.1| dispersed gene family protein 1 (DGF-1), putative [Trypanosoma cruzi]
Length = 3479
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 69/186 (37%), Gaps = 14/186 (7%)
Query: 7 KIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEK 66
++ ++ L ++S+ PV + S E++ + L T P
Sbjct: 2516 SLLNGAVLYVMGGGALRGAVSAGSDEGGPVEL-----SVCDVEALNGALVLSGTFPAGSV 2570
Query: 67 ILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQL--KLIAN-FENNG-KISTVVKPNQGI 122
+ ++ ++V + P + YL GSQ S P ++ +L+ + +G + TV+ + +
Sbjct: 2571 LTMTDSLLVTARPTPLVYLPGSQSSPYAPVLVLSGLRLVRSVLVVSGVALVTVMTDGRTV 2630
Query: 123 YAD---YQIISAIRSFEINIDRHCAIITMSLKIINAHDN--SLVGQKVFHVEEKLEKDNK 177
D +++ + + + + S +++ + G +V+ +
Sbjct: 2631 VVDGAVLELVGGGVALDAVVFGGEYALCASARVVALGGAVLRVSGSQVYAAHGLVFGSGV 2690
Query: 178 LHFIQS 183
+
Sbjct: 2691 EANASA 2696
>gi|241662134|ref|YP_002980494.1| hypothetical protein Rpic12D_0516 [Ralstonia pickettii 12D]
gi|240864161|gb|ACS61822.1| protein of unknown function DUF330 [Ralstonia pickettii 12D]
Length = 222
Score = 34.6 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 17/144 (11%), Positives = 49/144 (34%), Gaps = 3/144 (2%)
Query: 4 KLNKIIKKKIISCSLAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPI 63
+ + + + + + +C ++ L+ + ++ + ++
Sbjct: 3 PMQTTMLSFSLRVAGGAAVALLVGACASPEPTLHT--LSARPEATDTSRFQRAFRLSGVR 60
Query: 64 TEKILNSEDIIVRSSPIEIQYLIGSQWSDKLPRMIQLKLIANFENNGKISTVVKPNQGIY 123
L+ I++R+S E+ L +W+ ++ L AN V
Sbjct: 61 VPDRLDKPQIVLRTSDSEVVALEEQRWAAPFGSELRDALSANLATTLSAVDVGSAAAPAG 120
Query: 124 AD-YQIISAIRSFEINIDRHCAII 146
Y+I + +RS++ + +
Sbjct: 121 VPLYRIGAEMRSYDARPGQGVTAL 144
>gi|126736688|ref|ZP_01752427.1| lipoprotein, putative [Roseobacter sp. CCS2]
gi|126713803|gb|EBA10675.1| lipoprotein, putative [Roseobacter sp. CCS2]
Length = 185
Score = 34.6 bits (78), Expect = 9.2, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 64/189 (33%), Gaps = 21/189 (11%)
Query: 18 LAVLLCTSLSSCFFHNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRS 77
L VL T+ ++C + V + ++ S + V + ++ P + E+I +
Sbjct: 5 LLVLAVTAFAACAPLADRVALTPVSSSLELRPLVGSAMVRTVSLPTYAAV---EEIAFET 61
Query: 78 SPIEIQYLIGSQWSDKLPRMIQLKLIANFEN-------NGKISTVVKPNQGIYADYQ--I 128
+ I W+D+ R + L L + V P+ + +
Sbjct: 62 TQGRIMIREDVLWADEPERAVTLILTRTLSDILNTDVGPDPWPFVGLPDVSVDIRVSRML 121
Query: 129 ISAIRSFEINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAF 188
+FE+N A ++ + +F + E + + + + A
Sbjct: 122 GGTDGTFELNGQFFVASEAITFR---------DSSHIFEISEPMADASVDSISAAQSAAL 172
Query: 189 SRISSEIID 197
+++ +I
Sbjct: 173 LKLAEQIAA 181
>gi|229588469|ref|YP_002870588.1| hypothetical protein PFLU0926 [Pseudomonas fluorescens SBW25]
gi|229360335|emb|CAY47192.1| puattive exported protein [Pseudomonas fluorescens SBW25]
Length = 193
Score = 34.6 bits (78), Expect = 9.3, Method: Composition-based stats.
Identities = 17/166 (10%), Positives = 57/166 (34%), Gaps = 16/166 (9%)
Query: 32 HNNPVNIYDLTESTKYDESVQRHIQLIITEPITEKILNSEDIIVRSSPIEIQYLIGSQWS 91
+ P+ + LT + + + + I ++ I+VR + L W+
Sbjct: 27 SSTPITFHTLTPAQWSNSTGTDAGGIKIESISVPPQVDRPQIVVRQGNSGVAILDTQWWA 86
Query: 92 DKLPRMIQLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSFEINIDRHCAIITMSLK 151
L ++ L+ N+ +++ + ++ F+ + A++ + +
Sbjct: 87 ASLVDELRSALVDQLANSNPRQSML-----------LRLEVQRFDS-VPGQYALLDVKWR 134
Query: 152 I--INAHDNSLVGQKVFHVEEKLEKDNKLHFIQSLNRAFSRISSEI 195
+ + D + + + + + + + R +++I
Sbjct: 135 LRPASGSDRAPLTCR--TTLQSPAGASIDDLVLAHQNNLKRFAAQI 178
>gi|289641281|ref|ZP_06473447.1| deoxyxylulose-5-phosphate synthase [Frankia symbiont of Datisca
glomerata]
gi|289508879|gb|EFD29812.1| deoxyxylulose-5-phosphate synthase [Frankia symbiont of Datisca
glomerata]
Length = 644
Score = 34.6 bits (78), Expect = 9.6, Method: Composition-based stats.
Identities = 16/105 (15%), Positives = 35/105 (33%), Gaps = 13/105 (12%)
Query: 89 QWSDKL-PRMI----QLKLIANFENNGKISTVVKPNQGIYADYQIISAIRSF-------- 135
+W L P ++ L+ E+NG++ V + D + +R F
Sbjct: 538 RWVKPLDPVLVDLARAHSLVVTVEDNGRVGGVGSTLAQLLRDADVDVPLRDFGIPQTFLD 597
Query: 136 EINIDRHCAIITMSLKIINAHDNSLVGQKVFHVEEKLEKDNKLHF 180
+ D+ A I +S + + L + + ++
Sbjct: 598 QGKRDQVMADIGLSAQELARRIVELAASRAPALTTGEAEEETPAG 642
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.309 0.143 0.393
Lambda K H
0.267 0.0440 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,567,412,991
Number of Sequences: 13984884
Number of extensions: 140299408
Number of successful extensions: 525612
Number of sequences better than 10.0: 1062
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 707
Number of HSP's that attempted gapping in prelim test: 524173
Number of HSP's gapped (non-prelim): 1387
length of query: 208
length of database: 4,792,584,752
effective HSP length: 133
effective length of query: 75
effective length of database: 2,932,595,180
effective search space: 219944638500
effective search space used: 219944638500
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.1 bits)
S2: 78 (34.6 bits)