HHsearch alignment for GI: 254780142 and conserved domain: PRK05258

>PRK05258 DNA-directed RNA polymerase subunit beta'; Provisional.

Probab=96.26  E-value=4.7e-05  Score=55.96  Aligned_cols=30  Identities=10%  Similarity=-0.015  Sum_probs=25.6

Q ss_pred             EECHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCH
Q ss_conf             006125601247628614894188645456641069
Q gi|254780142|r 1242 AINHKHIEVVVRHMLQKVEITDPADTEYILGDNVDR 1277 (1398)
Q Consensus      1242 ~IN~RHIeLIaD~MT~kg~I~~~Gdt~~i~g~~Inr 1277 (1398)
T Consensus      1102 ~~n~~~~~~g~~~a~~~~~llG------ITr~~l~t 1131 (1204)
T PRK05258       1102 DANKKVLISGGIPATARPVLLG------ITKASLET 1131 (1204)
T ss_pred             HHHHHHHHCCCCCCEEEEEEEE------EECCCCCC
T ss_conf             9999999759976445458877------63165233