BLAST/PSIBLAST alignment of GI: 254780142 and GI: 241204158 at iteration 1
>gi|241204158|ref|YP_002975254.1| DNA-directed RNA polymerase subunit beta' [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1402
>gi|240858048|gb|ACS55715.1| DNA-directed RNA polymerase, beta' subunit [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 1402
 Score = 2097 bits (5434), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 988/1378 (71%), Positives = 1180/1378 (85%)

Query: 1    MQQEVMRFFNPWTDDRGFDSVRISIASPAKIASLSYGEIKKPETINYRTFKPERDGLFCA 60
            M QEVM  FNP    + FDS+RISIASP KI S SYGEIKKPETINYRTFKPERDGLFCA
Sbjct: 1    MNQEVMNLFNPQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 60

Query: 61   RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLSSVRRDRMAHIDLASPVAHPWFLKS 120
            RIFGPIKDYEC+CGKYKRMKYKGIICEKCGVEVTLS VRR+RM HI+LA+PVAH WFLKS
Sbjct: 61   RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS 120

Query: 121  LPSRISTLLGMSLRDVERVLYFESYVVVDPGLSSLEKYQILTEEEYVEAVSQFGQDQFIA 180
            LPSRISTLL M+L+DVERVLYFE+Y+V +PGL++L+++Q+L+EEEY+ AV ++G+DQF A
Sbjct: 121  LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKEHQLLSEEEYMLAVDEYGEDQFTA 180

Query: 181  MMGADAIYELLIALDLQNLALTLRDQLSKSSSIFRRKKIIKRLKIVDSFITSGNNPGWMI 240
            M+GA+AIYE+L +++L+ +A  LR +L+ ++S  ++KK++KRLKIV++F+ SGN P WMI
Sbjct: 181  MIGAEAIYEMLASMNLEKIAGDLRAELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMI 240

Query: 241  IRKLPVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIIRNEKRM 300
            ++ +PV+PPDLRPLV LD GRFA SDLNDLYRRVI RNNRL RL  L AP IIIRNEKRM
Sbjct: 241  MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM 300

Query: 301  LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGRSVIVAG 360
            LQESVDALFDNGR  RV+TGAN+RPLKSLSDMLKGKQGRFR NLLGKRVDYSGRSVIV G
Sbjct: 301  LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG 360

Query: 361  PELQLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVLAEVVHQ 420
            PEL+LHQCGLPK MALELFKPF+YA+L+ KGY STVKQAKK VEKE+PEVWD+L EV+ +
Sbjct: 361  PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE 420

Query: 421  HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQL 480
            H VLLNRAP+LHRL +QAFEP ++ GKAIQLHPLVC  +NADFDGDQMAV+  +S EAQL
Sbjct: 421  HPVLLNRAPTLHRLGIQAFEPILVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL 480

Query: 481  EARVLMLSTNNLLHPASGAPVTVPSQDMVLGLCYLSTVHEGDPGEGMLFADMGEVYHALE 540
            EARVLM+STNN+LHPA+GAP+ VPSQDMVLGL YLS +++ +PGEGM F+D+GE++HALE
Sbjct: 481  EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALE 540

Query: 541  NKIVTLHSKIRGRYKSVDKDGNSISKIYDTTPGRMIIGEILPRHHEISFDICNQEMIKKN 600
            +K+VTLH+KIRGR+KSVD+DG   SKIY+TTPGR++IGE+LP++ ++ FDICNQEM KKN
Sbjct: 541  SKVVTLHTKIRGRFKSVDEDGKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKN 600

Query: 601  ISAMVDTIYRHCGQKSTVAFCDDLMRLGFRYACSSGISFGKDDIIVPESKEKIIAEADKM 660
            IS M+DT+YRHCGQK TV FCD +M+LGF +AC +GISFGKDD+++P++K KI+A+ + +
Sbjct: 601  ISKMIDTVYRHCGQKDTVIFCDRIMQLGFAHACRAGISFGKDDMVIPDAKAKIVADTENL 660

Query: 661  VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMMARIKRVEFDPETGRQKKMNSIF 720
            VKEYE QYNDGLIT+GEKYNKVVD WGK T+KV EEMMARIK VEFD +TGRQK MNSI+
Sbjct: 661  VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDEKTGRQKPMNSIY 720

Query: 721  MMSHSGARGSIHQMRQLGGMRGLIAKPSGEIIESPIRSHFKGGLCGFEFFQSCVGGRKGL 780
            MMSHSGARGS +QMRQLGGMRGL+AKPSGEIIE+PI S+FK GL   E+F S  G RKGL
Sbjct: 721  MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL 780

Query: 781  LDVVMRTASSGYLSRRLVDVAQNCVVNQVDCNTKKGLTITHIVDSGQVVYSLGSRVLGRT 840
             D  ++TA+SGYL+RRLVDVAQ+C+V  VDC T+ GLT+T IVD+GQVV S+G R+LGRT
Sbjct: 781  ADTALKTANSGYLTRRLVDVAQDCIVTHVDCGTQTGLTMTAIVDAGQVVASIGVRILGRT 840

Query: 841  ALDDIINPLTNECIVKAGQLILESHVNEIEKCGIRSVRIRSALTCESSRGVCVLCYGRDL 900
            ALDDI +P+T E IV AG++ILE  V EIEK GI+S+RIRSALTCE   GVC +CYGRDL
Sbjct: 841  ALDDIDHPVTGERIVDAGRMILEPDVVEIEKAGIQSIRIRSALTCEIQTGVCSVCYGRDL 900

Query: 901  ARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSFIESPCDGIVKIKNRN 960
            ARG+ VN+GEAVGVIAAQSIGEPGTQLTMRTFHLGG  TV+D+SF+E+  +G V+IKNRN
Sbjct: 901  ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN 960

Query: 961  VCRNSTNDLISMGRNTTLQILDMSGQEQYSHRIMYGAKLFVDDGGVIECGQRISEWDPHT 1020
            + RNS  +L++MGRN T+QILD  G E+ S R+ YG+KL VD+G  ++ GQR++EWDP+T
Sbjct: 961  ILRNSDGNLVAMGRNMTVQILDERGVERSSQRVAYGSKLHVDEGDKVKRGQRLAEWDPYT 1020

Query: 1021 FPIITEVSGTVGFEDLVDGISVIESIGESTGIAKRKVIDWRFASRSQNLKPAIVVTDENG 1080
             P++TEV+GTV FEDLVDG+SV+E+  ESTGI KR+VIDWR   R  +LKPAIV+ D +G
Sbjct: 1021 RPMMTEVAGTVQFEDLVDGLSVLEATDESTGITKRQVIDWRSTPRGSDLKPAIVIKDASG 1080

Query: 1081 VVLKSARGTDARWFLPVDALLSVSPGQKVSTGDVLARLPISSAKTKDITSGLPRVAELFE 1140
             + K +RG DAR+FL VDA+LSV PG KVS GDVLAR P+ SAKTKDIT GLPRVAELFE
Sbjct: 1081 NIAKLSRGGDARFFLSVDAILSVEPGTKVSQGDVLARSPLESAKTKDITGGLPRVAELFE 1140

Query: 1141 ARRPKNHAILAEISGTIRIKRNYKNKSRVVIEPFEDGVEPAEYFIPKNKHFYLQDGDHVE 1200
            ARRPK+HAI+AEI GTIR+ R+YKNK RV+IEP EDGVEP EY IPK K F+LQ+GD++E
Sbjct: 1141 ARRPKDHAIIAEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQEGDYIE 1200

Query: 1201 KGDYILDGNPVPQDILRIKGVEALASYLINEVQEVYRLEGVAINHKHIEVVVRHMLQKVE 1260
            KGDYILDGNP P DIL IKGVEALASYL+NE+QEVYRL+GV IN KHIEV+VR MLQKVE
Sbjct: 1201 KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVE 1260

Query: 1261 ITDPADTEYILGDNVDRIEVEELNRSLAQQGKKLVSFSPILQGITKASLQTKSFISAASF 1320
            ITD  D+ YI+GDNVDRIE+E++N  L +QGKK     P+L GITKASLQT SFISAASF
Sbjct: 1261 ITDAGDSTYIVGDNVDRIELEDVNDHLIEQGKKPAYGDPVLLGITKASLQTPSFISAASF 1320

Query: 1321 QETTKVLTEAAIAGKVDTLDGFKENVIVGRSIPAGTGAILHEKRRVAMNRDQMILKER 1378
            QETTKVLTEAAIAGK D L G KENVIVGR IPAGTG  + + RR+A +RD+MIL+ER
Sbjct: 1321 QETTKVLTEAAIAGKTDGLQGLKENVIVGRLIPAGTGGTMTQIRRIATSRDEMILEER 1378