BLAST/PSIBLAST alignment of GI: 254780142 and GI: 327194526 at iteration 1
>gi|327194526|gb|EGE61384.1| DNA-directed RNA polymerase protein, beta' subunit [Rhizobium etli CNPAF512] Length = 1407
 Score = 2101 bits (5444), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 990/1378 (71%), Positives = 1177/1378 (85%)

Query: 1    MQQEVMRFFNPWTDDRGFDSVRISIASPAKIASLSYGEIKKPETINYRTFKPERDGLFCA 60
            M QEVM  FNP    + FDS+RISIASP KI S SYGEIKKPETINYRTFKPERDGLFCA
Sbjct: 6    MNQEVMNLFNPQVPAQNFDSIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA 65

Query: 61   RIFGPIKDYECICGKYKRMKYKGIICEKCGVEVTLSSVRRDRMAHIDLASPVAHPWFLKS 120
            RIFGPIKDYEC+CGKYKRMKYKGIICEKCGVEVTLS VRR+RM HI+LA+PVAH WFLKS
Sbjct: 66   RIFGPIKDYECLCGKYKRMKYKGIICEKCGVEVTLSRVRRERMGHIELAAPVAHIWFLKS 125

Query: 121  LPSRISTLLGMSLRDVERVLYFESYVVVDPGLSSLEKYQILTEEEYVEAVSQFGQDQFIA 180
            LPSRISTLL M+L+DVERVLYFE+Y+V +PGL++L+++Q+L+EEEY+ AV ++G+DQF A
Sbjct: 126  LPSRISTLLDMTLKDVERVLYFENYIVTEPGLTALKEHQLLSEEEYMLAVDEYGEDQFTA 185

Query: 181  MMGADAIYELLIALDLQNLALTLRDQLSKSSSIFRRKKIIKRLKIVDSFITSGNNPGWMI 240
            M+GA+AIYE+L +++L+ +A  LR +L+ ++S  ++KK++KRLKIV++F+ SGN P WMI
Sbjct: 186  MIGAEAIYEMLASMNLEKIAGDLRSELADTTSDLKQKKLMKRLKIVENFMESGNRPEWMI 245

Query: 241  IRKLPVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIIRNEKRM 300
            ++ +PV+PPDLRPLV LD GRFA SDLNDLYRRVI RNNRL RL  L AP IIIRNEKRM
Sbjct: 246  MKVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLIELRAPGIIIRNEKRM 305

Query: 301  LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQGRFRTNLLGKRVDYSGRSVIVAG 360
            LQESVDALFDNGR  RV+TGAN+RPLKSLSDMLKGKQGRFR NLLGKRVDYSGRSVIV G
Sbjct: 306  LQESVDALFDNGRRGRVITGANKRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVTG 365

Query: 361  PELQLHQCGLPKLMALELFKPFLYAQLEKKGYVSTVKQAKKFVEKERPEVWDVLAEVVHQ 420
            PEL+LHQCGLPK MALELFKPF+YA+L+ KGY STVKQAKK VEKE+PEVWD+L EV+ +
Sbjct: 366  PELKLHQCGLPKKMALELFKPFIYARLDAKGYSSTVKQAKKLVEKEKPEVWDILDEVIRE 425

Query: 421  HVVLLNRAPSLHRLSMQAFEPKIISGKAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQL 480
            H VLLNRAP+LHRL +QAFEP ++ GKAIQLHPLVC  +NADFDGDQMAV+  +S EAQL
Sbjct: 426  HPVLLNRAPTLHRLGIQAFEPTLVEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSLEAQL 485

Query: 481  EARVLMLSTNNLLHPASGAPVTVPSQDMVLGLCYLSTVHEGDPGEGMLFADMGEVYHALE 540
            EARVLM+STNN+LHPA+GAP+ VPSQDMVLGL YLS +++ +PGEGM F+D+GE++HALE
Sbjct: 486  EARVLMMSTNNILHPANGAPIIVPSQDMVLGLYYLSILNQNEPGEGMAFSDLGELHHALE 545

Query: 541  NKIVTLHSKIRGRYKSVDKDGNSISKIYDTTPGRMIIGEILPRHHEISFDICNQEMIKKN 600
            +K+VTLH+KIRGR+KSVD+DG   SKIY+TTPGR++IGE+LP++ ++ FDICNQEM KKN
Sbjct: 546  SKVVTLHTKIRGRFKSVDEDGKPYSKIYETTPGRLLIGELLPKNGKVPFDICNQEMTKKN 605

Query: 601  ISAMVDTIYRHCGQKSTVAFCDDLMRLGFRYACSSGISFGKDDIIVPESKEKIIAEADKM 660
            IS M+DT+YRHCGQK TV FCD +M+LGF +AC +GISFGKDD+++P +K KI+A+ + +
Sbjct: 606  ISKMIDTVYRHCGQKDTVIFCDRIMQLGFAHACRAGISFGKDDMVIPATKAKIVADTENL 665

Query: 661  VKEYENQYNDGLITRGEKYNKVVDLWGKTTDKVTEEMMARIKRVEFDPETGRQKKMNSIF 720
            VKEYE QYNDGLIT+GEKYNKVVD WGK T+KV EEMMARIK VEFD  TGRQK MNSI+
Sbjct: 666  VKEYEQQYNDGLITQGEKYNKVVDAWGKATEKVAEEMMARIKAVEFDENTGRQKPMNSIY 725

Query: 721  MMSHSGARGSIHQMRQLGGMRGLIAKPSGEIIESPIRSHFKGGLCGFEFFQSCVGGRKGL 780
            MMSHSGARGS +QMRQLGGMRGL+AKPSGEIIE+PI S+FK GL   E+F S  G RKGL
Sbjct: 726  MMSHSGARGSPNQMRQLGGMRGLMAKPSGEIIETPIISNFKEGLTVNEYFNSTHGARKGL 785

Query: 781  LDVVMRTASSGYLSRRLVDVAQNCVVNQVDCNTKKGLTITHIVDSGQVVYSLGSRVLGRT 840
             D  ++TA+SGYL+RRLVDVAQ+C+V  VDC T+ GLT+T IVD+GQVV SLG+R+LGRT
Sbjct: 786  ADTALKTANSGYLTRRLVDVAQDCIVTHVDCGTETGLTMTAIVDAGQVVASLGARILGRT 845

Query: 841  ALDDIINPLTNECIVKAGQLILESHVNEIEKCGIRSVRIRSALTCESSRGVCVLCYGRDL 900
            ALDDI +P+T E IV AG++ILE  V EIEK GI+S+RIRSALTCE   GVC +CYGRDL
Sbjct: 846  ALDDIDHPVTGERIVDAGKMILEPDVIEIEKAGIQSIRIRSALTCEIQTGVCSVCYGRDL 905

Query: 901  ARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGGAVTVMDRSFIESPCDGIVKIKNRN 960
            ARG+ VN+GEAVGVIAAQSIGEPGTQLTMRTFHLGG  TV+D+SF+E+  +G V+IKNRN
Sbjct: 906  ARGTPVNMGEAVGVIAAQSIGEPGTQLTMRTFHLGGTATVVDQSFLEASYEGTVQIKNRN 965

Query: 961  VCRNSTNDLISMGRNTTLQILDMSGQEQYSHRIMYGAKLFVDDGGVIECGQRISEWDPHT 1020
            V RNS   L++MGRN T+QILD  G E+ S R+ YG+KL VD+G  ++ GQR++EWDP+T
Sbjct: 966  VLRNSEGSLVAMGRNMTVQILDERGVERSSQRVAYGSKLHVDEGDKVKRGQRLAEWDPYT 1025

Query: 1021 FPIITEVSGTVGFEDLVDGISVIESIGESTGIAKRKVIDWRFASRSQNLKPAIVVTDENG 1080
             P++TEV+GTV FEDLVDG+SV+E+  ESTGI KR+VIDWR   R  +LKPAIV+ D +G
Sbjct: 1026 RPMMTEVAGTVQFEDLVDGLSVLEATDESTGITKRQVIDWRSTPRGSDLKPAIVIKDASG 1085

Query: 1081 VVLKSARGTDARWFLPVDALLSVSPGQKVSTGDVLARLPISSAKTKDITSGLPRVAELFE 1140
             V K +RG DAR+ L VDA+LSV PG KVS GDVLAR P+ SAKTKDIT GLPRVAELFE
Sbjct: 1086 NVAKLSRGGDARFLLSVDAILSVEPGTKVSQGDVLARSPLESAKTKDITGGLPRVAELFE 1145

Query: 1141 ARRPKNHAILAEISGTIRIKRNYKNKSRVVIEPFEDGVEPAEYFIPKNKHFYLQDGDHVE 1200
            ARRPK+HAI+AEI GTIR+ R+YKNK RV+IEP EDGVEP EY IPK K F+LQDGD++E
Sbjct: 1146 ARRPKDHAIIAEIDGTIRLGRDYKNKRRVIIEPAEDGVEPVEYLIPKGKPFHLQDGDYIE 1205

Query: 1201 KGDYILDGNPVPQDILRIKGVEALASYLINEVQEVYRLEGVAINHKHIEVVVRHMLQKVE 1260
            KGDYILDGNP P DIL IKGVEALASYL+NE+QEVYRL+GV IN KHIEV+VR MLQKVE
Sbjct: 1206 KGDYILDGNPAPHDILAIKGVEALASYLVNEIQEVYRLQGVVINDKHIEVIVRQMLQKVE 1265

Query: 1261 ITDPADTEYILGDNVDRIEVEELNRSLAQQGKKLVSFSPILQGITKASLQTKSFISAASF 1320
            ITD  D+ YI+GDNVDRIE+E++N  L +QGKK     P+L GITKASLQT SFISAASF
Sbjct: 1266 ITDAGDSTYIVGDNVDRIELEDVNDHLIEQGKKPAHGDPVLLGITKASLQTPSFISAASF 1325

Query: 1321 QETTKVLTEAAIAGKVDTLDGFKENVIVGRSIPAGTGAILHEKRRVAMNRDQMILKER 1378
            QETTKVLTEAAIAGK D L G KENVIVGR IPAGTG  + + RR+A +RD++IL+ER
Sbjct: 1326 QETTKVLTEAAIAGKTDGLQGLKENVIVGRLIPAGTGGTMTQIRRIATSRDELILEER 1383