PSIBLAST alignment of GI: 254780142 and protein with PDB id: 1iw7

gi|21730340|pdb|1IW7|D Chain D, Crystal Structure Of The Rna Polymerase Holoenzyme From Thermus Thermophilus At 2.6a Resolution Length = 1524
>gi|21730346|pdb|1IW7|N Chain N, Crystal Structure Of The Rna Polymerase Holoenzyme From Thermus Thermophilus At 2.6a Resolution Length = 1524
 Score =  307 bits (786), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 99/167 (59%), Positives = 127/167 (76%), Gaps = 7/167 (4%)

Query: 16  RGFDSVRISIASPAKIASLSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECICGK 75
           +    VRI++ASP KI S SYGE++KPETINYRT KPERDGLF  RIFGPIKDYEC CGK
Sbjct: 3   KEVRKVRIALASPEKIRSWSYGEVEKPETINYRTLKPERDGLFDERIFGPIKDYECACGK 62

Query: 76  YKRMKYKGIICEKCGVEVTLSSVRRDRMAHIDLASPVAHPWFLKSLPSRISTLLGMSLRD 135
           YKR +++G +CE+CGVEVT S VRR RM HI+LA+P AH WF+K +PS+I TLL +S  +
Sbjct: 63  YKRQRFEGKVCERCGVEVTKSIVRRYRMGHIELATPAAHIWFVKDVPSKIGTLLDLSATE 122

Query: 136 VERVLYFESYVVVDPGLSSL-----EKYQILTEEEYVEAVSQFGQDQ 177
           +E+VLYF  Y+V+DP  + L     EK Q+LT+EEY E   ++G+ +
Sbjct: 123 LEQVLYFSKYIVLDPKGAILNGVPVEKRQLLTDEEYREL--RYGKQE 167