PSIBLAST alignment of GI: 254780142 and protein with PDB id: 3qqc

>gi|326634531|pdb|3QQC|A Chain A, Crystal Structure Of Archaeal Spt45 BOUND TO THE RNAP CLAMP DOMAIN Length = 436
 Score =  277 bits (708), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 82/343 (23%), Positives = 128/343 (37%), Gaps = 43/343 (12%)

Query: 16  RGFDSVRISIASPAKIASLSYGEIKKPETINYRTFKPERDGLFCARIFGPIKDYECICGK 75
           +   S+   I SP +I  +S  E+  P+T +   + P   G+   R+             
Sbjct: 67  KVIGSIEFGILSPQEIRKMSAVEVTVPDTYDDDGY-PIEGGVMDKRMGVID--------- 116

Query: 76  YKRMKYKGIICEKCGVEVTLSSVRRDRMAHIDLASPVAHPWFLKSLPSRISTLLGMSLRD 135
                  G+ CE CG              HI+LA PV H  F K+    I  +L  + R+
Sbjct: 117 ------PGLRCETCGGRAGECP---GHFGHIELARPVIHVGFAKT----IYRILESTCRE 163

Query: 136 VERVLYFESYVVVDPGLSSLEKYQILTEE---EYVEAVSQFGQDQFI--AMMGADAIYEL 190
             R+       + D  +    K   L      E+ E + +  +            A    
Sbjct: 164 CGRI------KLTDEEIEEYMKKIELARNRRSEFNEIIKEIHKKAKERMVCPHCGAPQYP 217

Query: 191 LI--------ALDLQNLALTLRDQLSKSSSIFRRKKIIKRLKIVDSFITSGNNPGWMIIR 242
           +          +         R +L  +      +KI  +   +       + P WM++ 
Sbjct: 218 IKFEKPTIYWEIRKDEQGNEYRHRLMPTEVRDWLEKIPDKDLPLLGLDPEKSRPEWMVLT 277

Query: 243 KLPVLPPDLRPLVALDFGRFAASDLNDLYRRVIGRNNRLMRLKSLHAPEIIIRNEKRMLQ 302
            LPV P   RP + L+ G  A  DL      +I  NNRL +     AP++II +   +LQ
Sbjct: 278 VLPVPPVTARPSITLETGIRAEDDLTHKLVDIIRINNRLKQNIEAGAPQLIIEDLWDLLQ 337

Query: 303 ESVDALFDNGRHKRVV-TGANRRPLKSLSDMLKGKQGRFRTNL 344
             V    +N           + RPLK+L+  LKGK+GRFR NL
Sbjct: 338 YHVTTYINNEAPGVPPAKHKSGRPLKTLAQRLKGKEGRFRGNL 380