RPSBLAST alignment for GI: 254780142 and conserved domain: cd02736

>gnl|CDD|132723 cd02736, RNAP_III_Rpc1_C, Largest subunit (Rpc1) of Eukaryotic RNA polymerase III (RNAP III), C-terminal domain. Eukaryotic RNA polymerase III (RNAP III) is a large multi-subunit complex responsible for the synthesis of tRNAs, 5SrRNA, Alu-RNA, U6 snRNA, among others. Rpc1 is also known as C160 in yeast. Structure studies suggest that different RNA polymerase complexes share a similar crab-claw-shape structure. The C-terminal domain of Rpb1, the largest subunit of RNAP II, makes up part of the foot and jaw structures of RNAP II. The similarity between this domain and the C-terminal domain of Rpb1, its counterpart in RNAP II, suggests a similar functional and structural role. Length = 300

 Score = 58.8 bits (143), Expect = 1e-08
 Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 38/146 (26%)

Query: 1214 DILRIKGVEALASYLINEVQEVYRLEGVAINHKHIEVVVRHMLQKVEITDPADTEYILGD 1273
            ++ ++ G+EA  S +INE+Q   +  G++I+ +HI ++   M  K E+         LG 
Sbjct: 193  EVEKVLGIEAARSTIINEIQYTMKSHGMSIDPRHIMLLADLMTFKGEV---------LG- 242

Query: 1274 NVDRIEVEELNRSLAQQGKKLVSFSPILQGITKASLQTKSFISAASFQETTKVLTEAAIA 1333
                     + R                 GI K     +S +  ASF++TT  L  AA+ 
Sbjct: 243  ---------ITR----------------FGIAKMK---ESVLMLASFEKTTDHLFNAALH 274

Query: 1334 GKVDTLDGFKENVIVGRSIPAGTGAI 1359
            G+ D+++G  E +I+G+ +P GTG  
Sbjct: 275  GRKDSIEGVSECIIMGKPMPIGTGLF 300