RPSBLAST alignment for GI: 254780142 and conserved domain: TIGR02389

>gnl|CDD|162832 TIGR02389, RNA_pol_rpoA2, DNA-directed RNA polymerase, subunit A''. This family consists of the archaeal A'' subunit of the DNA-directed RNA polymerase. The example from Methanocaldococcus jannaschii contains an intein. Length = 367
 Score = 66.2 bits (162), Expect = 6e-11
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 10/79 (12%)

Query: 858 GQLILESHVNEIEKCGIRSVRIRSALTCESSRGVCVLCYGRDLARGSLVNVGEAVGVIAA 917
            + +L+     ++K  I        +            Y R     SL++ GEAVG++AA
Sbjct: 3   PEKLLKELEETVKKREISDKEELDEIIKRVEEE-----YLR-----SLIDPGEAVGIVAA 52

Query: 918 QSIGEPGTQLTMRTFHLGG 936
           QSIGEPGTQ+TMRTFH  G
Sbjct: 53  QSIGEPGTQMTMRTFHYAG 71