RPSBLAST alignment for GI: 254780142 and conserved domain: COG0086
>gnl|CDD|30435 COG0086, RpoC, DNA-directed RNA polymerase, beta' subunit/160 kD subunit [Transcription]. Length = 808
Score = 42.6 bits (100), Expect = 9e-04
Identities = 27/224 (12%), Positives = 54/224 (24%), Gaps = 29/224 (12%)
Query: 714 KKMNSIFMMSHSGARGSIHQMRQLGGMRGLIAKPSGEIIESPIRSHFKGGLCGFEFFQSC 773
K + S+ ++ ++ E I+ L E+
Sbjct: 84 KSIPSLL----DMTCRDCERVLYF--EAYVVLGTDLEKIQ---------LLNETEYVYDS 128
Query: 774 VGGRKGLLDVVMRTASSGYLSRRLVDVAQNCVVNQVDCNTKKGLTITHIVDSGQVVYSLG 833
G + + + R + TK + + + S
Sbjct: 129 FCAHCGAEAIKILLEKPDLETEREEET---------LSPTKVKKLLKRLKVVDAFLLSGN 179
Query: 834 SRVLGRTALDDIINPLTNECIVKAGQLILESHVNEIEKCGIRSVRIRSALTCESS-RGVC 892
+ + P I G ES +N++ + I L ++ V
Sbjct: 180 RPEWMILTVLPVPPPDLRPSIQLDGGRFAESDLNDLYRRVINRNNRLKRLLELAAPIIVR 239
Query: 893 VLCYGRDLARGSLVNVGEAVGVIAAQSIGEPGTQLTMRTFHLGG 936
A +L + + G P L+ R G
Sbjct: 240 NEKRMLQEAVDALFDNR-RPRAVTG---GRPLKSLSQRLKGKQG 279