RPSBLAST alignment for GI: 254780142 and conserved domain: KOG0262

>gnl|CDD|35483 KOG0262, KOG0262, KOG0262, RNA polymerase I, large subunit [Transcription]. Length = 1640
 Score =  128 bits (324), Expect = 7e-30
 Identities = 85/338 (25%), Positives = 149/338 (44%), Gaps = 60/338 (17%)

Query: 235 NPGWMI-IRKLPVLPPDLRPLVALDFGRFAASDLNDLYRRV------IGRNNRLMRLKSL 287
           +P  M  +  L V P   RP   L       +       +V      I +  + M+ K  
Sbjct: 323 DPSDMFFLDNLLVPPTRFRPPSMLG-DEVHENPQTLNLNKVLESSVLIRKLLKDMKGKLD 381

Query: 288 HAPEIIIRNEKRM----------LQESVDALFDNGRHKRVVTGANRRPLKSLSDMLKGKQ 337
              ++I+   + +          LQ SV+ LFD+    +     +R     +  +L+ K+
Sbjct: 382 EELKLILERLRGIFSKLINAWLQLQASVNVLFDSKMASK----WSRDSPPGIKQILEKKE 437

Query: 338 GRFRTNLLGKRVDYSGRSVIVAGPELQLHQCGLPKLMALELFKP-----FLYAQL----- 387
           G FR +++GKRV+Y+ RSVI   P ++ ++ G+P + A +L  P     +   +L     
Sbjct: 438 GLFRKHMMGKRVNYAARSVISPDPNIETNEIGIPPVFAKKLTYPEPVTPWNVNELRKAVI 497

Query: 388 -------------EKKGYVS-----TVKQ----AKKFVEKERPEVWDVLAEVVHQH---- 421
                        ++ G ++     T +Q    A + +        +   + VH+H    
Sbjct: 498 NGPDVHPGATYIQDEDGTLTLLSPMTDEQREALANQLLTPSTGNPTEFGTKKVHRHVKNG 557

Query: 422 -VVLLNRAPSLHRLSMQAFEPKIISG-KAIQLHPLVCAGYNADFDGDQMAVYAVISPEAQ 479
            VVL+NR P+LH+ S+ A + +++ G K ++LH   C  YNADFDGD+M V+   S  A+
Sbjct: 558 DVVLMNRQPTLHKPSIMAHKARVLPGEKTLRLHYANCKAYNADFDGDEMNVHFPQSEIAR 617

Query: 480 LEARVLMLSTNNLLHPASGAPVTVPSQDMVLGLCYLST 517
            EA  +  + +  L P  G P+    QD ++    L+ 
Sbjct: 618 AEAYNIANTDSQYLVPTDGTPLRGLIQDHIVSGVLLTM 655