BLAST/PSIBLAST alignment of GI: 254780143 and GI: 315122745 at iteration 1
>gi|315122745|ref|YP_004063234.1| DNA-directed RNA polymerase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1382
>gi|313496147|gb|ADR52746.1| DNA-directed RNA polymerase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1382
Score = 2577 bits (6680), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1247/1382 (90%), Positives = 1311/1382 (94%)
Query: 1 MAKGVVFNGLGRVRKFFGKNPEIIDIPDLIEVQKASYDHFLMMNIAPDERPNEGLQAAFK 60
MAK VVFNGLGR RKFFGK PEIIDIPDLIEVQ+ASYD FLMMN +P+ERPNEGLQAAFK
Sbjct: 1 MAKDVVFNGLGRARKFFGKIPEIIDIPDLIEVQRASYDQFLMMNSSPEERPNEGLQAAFK 60
Query: 61 SVFPITAFSGAAMLEFVSYEFDPPKFDVDDCLWRDLTYAVPLKITLRLIVFDVDEFTGAK 120
SVFPITAFSGAAMLEF SYEFD PKFDVDDCL RDLTYA PLKI LRLIVFD+DEFTGAK
Sbjct: 61 SVFPITAFSGAAMLEFESYEFDSPKFDVDDCLRRDLTYAAPLKIILRLIVFDIDEFTGAK 120
Query: 121 SIKDIKEQSIYMGDLPLMTKDGTFVIKGIQRIVVSQLHRSPGIHFDHDKGRASLSGKLLY 180
SIKDIKEQSIYMGD+PLMTKDGTFVI G QRIVVSQLHRSPGI FDHDKGRASLSGKLLY
Sbjct: 121 SIKDIKEQSIYMGDVPLMTKDGTFVINGTQRIVVSQLHRSPGILFDHDKGRASLSGKLLY 180
Query: 181 ACRIIPDQGLWMDIEFDSKDIIHVRIDRRRKVPVTSFLMALGMDSEEILSTFYPKIVYSQ 240
ACRIIPDQGLWMDIEFDSKDIIHVRIDRRRKVPVTSFLMALGM+SE+ILSTFY KIVY +
Sbjct: 181 ACRIIPDQGLWMDIEFDSKDIIHVRIDRRRKVPVTSFLMALGMNSEDILSTFYSKIVYVK 240
Query: 241 RGDFWCFPLSAADLMVGAKVSSSLVDIDTGEQVIESGKKLTSGLLKSLKEKGVKFLGITS 300
+G++WCFPLS ADL+VG+KVSSSL+D+DTGE+VIESGK+ T+ LLK+LKEKGV FLG+TS
Sbjct: 241 KGEYWCFPLSCADLIVGSKVSSSLIDVDTGERVIESGKRFTANLLKNLKEKGVGFLGVTS 300
Query: 301 DCLCGLYVAEDIVNGETGEIYIEAGDVIDEKSLEEIFHSEIRDIPILYVDSVNNNAYIRN 360
D L G YVAEDIVN TGEIY+EAGD IDE +L I I DIP+L+VDS+++NAY+RN
Sbjct: 301 DYLYGSYVAEDIVNETTGEIYLEAGDAIDEPTLAAIVSCGIEDIPVLHVDSIDSNAYVRN 360
Query: 361 TLVTDKNKDRKDALLDIYRVMRPGDVSTFSVAESMFNFLFFDSDKYDLSTVGRVKMNMRL 420
TLV DKNKD KDALLDIYRVMRPGDV T S AESMFNFLFFD DKYDLS VGRVKMNMRL
Sbjct: 361 TLVLDKNKDYKDALLDIYRVMRPGDVPTVSAAESMFNFLFFDPDKYDLSAVGRVKMNMRL 420
Query: 421 NLDTPDDVRHIRKEDIIAIIKILVDLRNGKGTIDDIDNLGNRRVRSVGEMLKNQYRLGLL 480
NLD PD VRH+RKED+IAIIKILVDLR+GKG IDDIDNLGNRRVRSVGEMLKNQYRLGLL
Sbjct: 421 NLDVPDTVRHVRKEDVIAIIKILVDLRDGKGKIDDIDNLGNRRVRSVGEMLKNQYRLGLL 480
Query: 481 RMERSIKERISSVDIDSVMPQDLINAKPVVSAVCEFFCSSQLSQLEEHVNSLSRITHTRR 540
RMERSIKERISSVDIDSVMPQDLINAKPVVSAV EFFCSSQLSQLEEHVNSLSRITHTRR
Sbjct: 481 RMERSIKERISSVDIDSVMPQDLINAKPVVSAVREFFCSSQLSQLEEHVNSLSRITHTRR 540
Query: 541 LSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIET 600
LSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIET
Sbjct: 541 LSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIET 600
Query: 601 PYRKVCDGKVTNDVVYLSAMEEENRYIAQANSSLDEDGSFTEELVFCRCAGEEILVPREK 660
PYRKVCDGKVTN++VYLSA+EEENRYIAQ+N+SL EDGSF EELVFCRCAGEE+LVPRE
Sbjct: 601 PYRKVCDGKVTNEIVYLSAIEEENRYIAQSNASLKEDGSFAEELVFCRCAGEEVLVPREN 660
Query: 661 IDFIDASPKQVVSIAASLIPFLENDDSNRVLMGCNMQRQAVPLLKAEAPFVGTGMESVVA 720
I+F+D SPKQVVSIAASLIPFLENDDSNRVLMGCNMQRQAVPLLKAEAPFVGTGMESVVA
Sbjct: 661 INFMDTSPKQVVSIAASLIPFLENDDSNRVLMGCNMQRQAVPLLKAEAPFVGTGMESVVA 720
Query: 721 KSSGAAIVAKRAGIVEQVDAIRIVIRSVEGDLDPSTSGVDIYRLMKFQRSNQNTCVNQRP 780
KSSGAAIVAKRAGIVEQVDAIRIVIR VE DL+PS SGVDIYRLMKFQRSNQNTCVNQRP
Sbjct: 721 KSSGAAIVAKRAGIVEQVDAIRIVIRVVEEDLNPSASGVDIYRLMKFQRSNQNTCVNQRP 780
Query: 781 LVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFT 840
LVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFT
Sbjct: 781 LVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFT 840
Query: 841 SIHIEEFEVMARDTKLGPEEITRDIPNVSEEGLKNIDECGIICVGAEVNPGDILVGKITP 900
SIHIEEFEVMARDTKLGPEEITRDIPNVSEEGLKNIDECG+ICVGAEVNPGDILVGKITP
Sbjct: 841 SIHIEEFEVMARDTKLGPEEITRDIPNVSEEGLKNIDECGVICVGAEVNPGDILVGKITP 900
Query: 901 KGESPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVVDVRIFNRHGIDKNERSISVE 960
KG+SPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVV+VRIFNRHGIDKNERS+SVE
Sbjct: 901 KGDSPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVVEVRIFNRHGIDKNERSLSVE 960
Query: 961 REQIELLARDKDDEQVILDRNIYSRLMEILCGQNAVSGPKGFKKSTVLSSDLISEYPRSQ 1020
REQIELLARD+DDEQ ILDRNIYSRL EILC Q A+SGPKGFKKS+VLSSDLIS Y RSQ
Sbjct: 961 REQIELLARDRDDEQAILDRNIYSRLKEILCSQTAISGPKGFKKSSVLSSDLISGYQRSQ 1020
Query: 1021 WWQFAVQDEKVQRNVESLKVQYETSKSILEDRFKNKIEKIQWGDDMPPGVLRVVKVFVAM 1080
WWQFAVQDEKVQRN+ESL+ QYE SKS+LE RFKNKIEKIQWGDDM PGVLRVVKVFVAM
Sbjct: 1021 WWQFAVQDEKVQRNIESLRAQYEHSKSVLESRFKNKIEKIQWGDDMSPGVLRVVKVFVAM 1080
Query: 1081 KRPIQSGDKMAGRHGNKGIVSRILPCEDMPFLKDGTPVDIVLNPLGVPSRMNVGQIFETH 1140
KR IQSGDKMAGRHGNKGIVSRILPCEDMPFL+DGTPVDIVLNPLGVPSRMNVGQIFETH
Sbjct: 1081 KRSIQSGDKMAGRHGNKGIVSRILPCEDMPFLEDGTPVDIVLNPLGVPSRMNVGQIFETH 1140
Query: 1141 LGWACVGLGKKIKSLINDYKANGDISPLRSFLEKVIGTGSHTEKISDYDDDSVLRVAEQW 1200
LGWACVGLGKKIKS+INDYKANGDI+PLRSFLEK+IGTG H EKISDYDD SVLR+AEQW
Sbjct: 1141 LGWACVGLGKKIKSIINDYKANGDIAPLRSFLEKIIGTGPHAEKISDYDDASVLRLAEQW 1200
Query: 1201 KSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLN 1260
KSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLN
Sbjct: 1201 KSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLN 1260
Query: 1261 HMVSDKVYARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVLQEMLTIKSD 1320
HMVSDKV+ARS GSYSLVTQQPLGGKSNRGGQRLGEMEVWC QAYGAAYVLQEMLTIKSD
Sbjct: 1261 HMVSDKVHARSIGSYSLVTQQPLGGKSNRGGQRLGEMEVWCTQAYGAAYVLQEMLTIKSD 1320
Query: 1321 DVVGRTRVYESIVAGNDTFETGTPESFNVLVKEMQALGLSIDLENSRTKNSAKMEEIPDF 1380
DVVGRT+VYESIV+G+++FETG PESFNVLVKEMQALGLSIDLENSR K++ KMEEIPD
Sbjct: 1321 DVVGRTKVYESIVSGDNSFETGIPESFNVLVKEMQALGLSIDLENSRAKSTVKMEEIPDL 1380
Query: 1381 NK 1382
N+
Sbjct: 1381 NE 1382