BLAST/PSIBLAST alignment of GI: 254780143 and GI: 315122745 at iteration 1
>gi|315122745|ref|YP_004063234.1| DNA-directed RNA polymerase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1382
>gi|313496147|gb|ADR52746.1| DNA-directed RNA polymerase subunit beta [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 1382
 Score = 2577 bits (6680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 1247/1382 (90%), Positives = 1311/1382 (94%)

Query: 1    MAKGVVFNGLGRVRKFFGKNPEIIDIPDLIEVQKASYDHFLMMNIAPDERPNEGLQAAFK 60
            MAK VVFNGLGR RKFFGK PEIIDIPDLIEVQ+ASYD FLMMN +P+ERPNEGLQAAFK
Sbjct: 1    MAKDVVFNGLGRARKFFGKIPEIIDIPDLIEVQRASYDQFLMMNSSPEERPNEGLQAAFK 60

Query: 61   SVFPITAFSGAAMLEFVSYEFDPPKFDVDDCLWRDLTYAVPLKITLRLIVFDVDEFTGAK 120
            SVFPITAFSGAAMLEF SYEFD PKFDVDDCL RDLTYA PLKI LRLIVFD+DEFTGAK
Sbjct: 61   SVFPITAFSGAAMLEFESYEFDSPKFDVDDCLRRDLTYAAPLKIILRLIVFDIDEFTGAK 120

Query: 121  SIKDIKEQSIYMGDLPLMTKDGTFVIKGIQRIVVSQLHRSPGIHFDHDKGRASLSGKLLY 180
            SIKDIKEQSIYMGD+PLMTKDGTFVI G QRIVVSQLHRSPGI FDHDKGRASLSGKLLY
Sbjct: 121  SIKDIKEQSIYMGDVPLMTKDGTFVINGTQRIVVSQLHRSPGILFDHDKGRASLSGKLLY 180

Query: 181  ACRIIPDQGLWMDIEFDSKDIIHVRIDRRRKVPVTSFLMALGMDSEEILSTFYPKIVYSQ 240
            ACRIIPDQGLWMDIEFDSKDIIHVRIDRRRKVPVTSFLMALGM+SE+ILSTFY KIVY +
Sbjct: 181  ACRIIPDQGLWMDIEFDSKDIIHVRIDRRRKVPVTSFLMALGMNSEDILSTFYSKIVYVK 240

Query: 241  RGDFWCFPLSAADLMVGAKVSSSLVDIDTGEQVIESGKKLTSGLLKSLKEKGVKFLGITS 300
            +G++WCFPLS ADL+VG+KVSSSL+D+DTGE+VIESGK+ T+ LLK+LKEKGV FLG+TS
Sbjct: 241  KGEYWCFPLSCADLIVGSKVSSSLIDVDTGERVIESGKRFTANLLKNLKEKGVGFLGVTS 300

Query: 301  DCLCGLYVAEDIVNGETGEIYIEAGDVIDEKSLEEIFHSEIRDIPILYVDSVNNNAYIRN 360
            D L G YVAEDIVN  TGEIY+EAGD IDE +L  I    I DIP+L+VDS+++NAY+RN
Sbjct: 301  DYLYGSYVAEDIVNETTGEIYLEAGDAIDEPTLAAIVSCGIEDIPVLHVDSIDSNAYVRN 360

Query: 361  TLVTDKNKDRKDALLDIYRVMRPGDVSTFSVAESMFNFLFFDSDKYDLSTVGRVKMNMRL 420
            TLV DKNKD KDALLDIYRVMRPGDV T S AESMFNFLFFD DKYDLS VGRVKMNMRL
Sbjct: 361  TLVLDKNKDYKDALLDIYRVMRPGDVPTVSAAESMFNFLFFDPDKYDLSAVGRVKMNMRL 420

Query: 421  NLDTPDDVRHIRKEDIIAIIKILVDLRNGKGTIDDIDNLGNRRVRSVGEMLKNQYRLGLL 480
            NLD PD VRH+RKED+IAIIKILVDLR+GKG IDDIDNLGNRRVRSVGEMLKNQYRLGLL
Sbjct: 421  NLDVPDTVRHVRKEDVIAIIKILVDLRDGKGKIDDIDNLGNRRVRSVGEMLKNQYRLGLL 480

Query: 481  RMERSIKERISSVDIDSVMPQDLINAKPVVSAVCEFFCSSQLSQLEEHVNSLSRITHTRR 540
            RMERSIKERISSVDIDSVMPQDLINAKPVVSAV EFFCSSQLSQLEEHVNSLSRITHTRR
Sbjct: 481  RMERSIKERISSVDIDSVMPQDLINAKPVVSAVREFFCSSQLSQLEEHVNSLSRITHTRR 540

Query: 541  LSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIET 600
            LSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIET
Sbjct: 541  LSALGQGGVARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARVNAYGFIET 600

Query: 601  PYRKVCDGKVTNDVVYLSAMEEENRYIAQANSSLDEDGSFTEELVFCRCAGEEILVPREK 660
            PYRKVCDGKVTN++VYLSA+EEENRYIAQ+N+SL EDGSF EELVFCRCAGEE+LVPRE 
Sbjct: 601  PYRKVCDGKVTNEIVYLSAIEEENRYIAQSNASLKEDGSFAEELVFCRCAGEEVLVPREN 660

Query: 661  IDFIDASPKQVVSIAASLIPFLENDDSNRVLMGCNMQRQAVPLLKAEAPFVGTGMESVVA 720
            I+F+D SPKQVVSIAASLIPFLENDDSNRVLMGCNMQRQAVPLLKAEAPFVGTGMESVVA
Sbjct: 661  INFMDTSPKQVVSIAASLIPFLENDDSNRVLMGCNMQRQAVPLLKAEAPFVGTGMESVVA 720

Query: 721  KSSGAAIVAKRAGIVEQVDAIRIVIRSVEGDLDPSTSGVDIYRLMKFQRSNQNTCVNQRP 780
            KSSGAAIVAKRAGIVEQVDAIRIVIR VE DL+PS SGVDIYRLMKFQRSNQNTCVNQRP
Sbjct: 721  KSSGAAIVAKRAGIVEQVDAIRIVIRVVEEDLNPSASGVDIYRLMKFQRSNQNTCVNQRP 780

Query: 781  LVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFT 840
            LVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFT
Sbjct: 781  LVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSEDVFT 840

Query: 841  SIHIEEFEVMARDTKLGPEEITRDIPNVSEEGLKNIDECGIICVGAEVNPGDILVGKITP 900
            SIHIEEFEVMARDTKLGPEEITRDIPNVSEEGLKNIDECG+ICVGAEVNPGDILVGKITP
Sbjct: 841  SIHIEEFEVMARDTKLGPEEITRDIPNVSEEGLKNIDECGVICVGAEVNPGDILVGKITP 900

Query: 901  KGESPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVVDVRIFNRHGIDKNERSISVE 960
            KG+SPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVV+VRIFNRHGIDKNERS+SVE
Sbjct: 901  KGDSPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVVEVRIFNRHGIDKNERSLSVE 960

Query: 961  REQIELLARDKDDEQVILDRNIYSRLMEILCGQNAVSGPKGFKKSTVLSSDLISEYPRSQ 1020
            REQIELLARD+DDEQ ILDRNIYSRL EILC Q A+SGPKGFKKS+VLSSDLIS Y RSQ
Sbjct: 961  REQIELLARDRDDEQAILDRNIYSRLKEILCSQTAISGPKGFKKSSVLSSDLISGYQRSQ 1020

Query: 1021 WWQFAVQDEKVQRNVESLKVQYETSKSILEDRFKNKIEKIQWGDDMPPGVLRVVKVFVAM 1080
            WWQFAVQDEKVQRN+ESL+ QYE SKS+LE RFKNKIEKIQWGDDM PGVLRVVKVFVAM
Sbjct: 1021 WWQFAVQDEKVQRNIESLRAQYEHSKSVLESRFKNKIEKIQWGDDMSPGVLRVVKVFVAM 1080

Query: 1081 KRPIQSGDKMAGRHGNKGIVSRILPCEDMPFLKDGTPVDIVLNPLGVPSRMNVGQIFETH 1140
            KR IQSGDKMAGRHGNKGIVSRILPCEDMPFL+DGTPVDIVLNPLGVPSRMNVGQIFETH
Sbjct: 1081 KRSIQSGDKMAGRHGNKGIVSRILPCEDMPFLEDGTPVDIVLNPLGVPSRMNVGQIFETH 1140

Query: 1141 LGWACVGLGKKIKSLINDYKANGDISPLRSFLEKVIGTGSHTEKISDYDDDSVLRVAEQW 1200
            LGWACVGLGKKIKS+INDYKANGDI+PLRSFLEK+IGTG H EKISDYDD SVLR+AEQW
Sbjct: 1141 LGWACVGLGKKIKSIINDYKANGDIAPLRSFLEKIIGTGPHAEKISDYDDASVLRLAEQW 1200

Query: 1201 KSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLN 1260
            KSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLN
Sbjct: 1201 KSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLN 1260

Query: 1261 HMVSDKVYARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVLQEMLTIKSD 1320
            HMVSDKV+ARS GSYSLVTQQPLGGKSNRGGQRLGEMEVWC QAYGAAYVLQEMLTIKSD
Sbjct: 1261 HMVSDKVHARSIGSYSLVTQQPLGGKSNRGGQRLGEMEVWCTQAYGAAYVLQEMLTIKSD 1320

Query: 1321 DVVGRTRVYESIVAGNDTFETGTPESFNVLVKEMQALGLSIDLENSRTKNSAKMEEIPDF 1380
            DVVGRT+VYESIV+G+++FETG PESFNVLVKEMQALGLSIDLENSR K++ KMEEIPD 
Sbjct: 1321 DVVGRTKVYESIVSGDNSFETGIPESFNVLVKEMQALGLSIDLENSRAKSTVKMEEIPDL 1380

Query: 1381 NK 1382
            N+
Sbjct: 1381 NE 1382