RPSBLAST alignment for GI: 254780143 and conserved domain: TIGR03670
>gnl|CDD|132709 TIGR03670, rpoB_arch, DNA-directed RNA polymerase subunit B. This model represents the archaeal version of DNA-directed RNA polymerase subunit B (rpoB) and is observed in all archaeal genomes. Length = 599
Score = 75.4 bits (186), Expect = 9e-14
Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 22/172 (12%)
Query: 778 QRPLVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSED 837
Q+PLVK R ++I D G+N +VA M + GYN ED++++++ +
Sbjct: 178 QKPLVKT----RVLELI------GYDDRPAGQNFVVAVMSYEGYNIEDALIMNKASIERG 227
Query: 838 VFTSIHIEEFEVMARDTKLGPE-EITRDIPNV----SEEGLKNIDECGIICVGAEVNPGD 892
+ S +E R G E P+V EE K++DE GI+ EV GD
Sbjct: 228 LARSTFFRTYEAEERRYPGGQEDRFEIPEPDVRGYRGEEAYKHLDEDGIVYPEVEVKGGD 287
Query: 893 ILVGKITPKGESPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVVDVRI 944
+L+GK +P P EE G RDTS+ V G G V V I
Sbjct: 288 VLIGKTSP----PRFLEE---LRELGLVTERRRDTSVTVRHGEKGIVDKVII 332