RPSBLAST alignment for GI: 254780143 and conserved domain: TIGR03670

>gnl|CDD|132709 TIGR03670, rpoB_arch, DNA-directed RNA polymerase subunit B. This model represents the archaeal version of DNA-directed RNA polymerase subunit B (rpoB) and is observed in all archaeal genomes. Length = 599
 Score = 75.4 bits (186), Expect = 9e-14
 Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 22/172 (12%)

Query: 778 QRPLVKVGDEVRRNDIIADGPSTDLGDLALGRNMLVAFMPWHGYNFEDSMLISERMVSED 837
           Q+PLVK     R  ++I         D   G+N +VA M + GYN ED++++++  +   
Sbjct: 178 QKPLVKT----RVLELI------GYDDRPAGQNFVVAVMSYEGYNIEDALIMNKASIERG 227

Query: 838 VFTSIHIEEFEVMARDTKLGPE-EITRDIPNV----SEEGLKNIDECGIICVGAEVNPGD 892
           +  S     +E   R    G E       P+V     EE  K++DE GI+    EV  GD
Sbjct: 228 LARSTFFRTYEAEERRYPGGQEDRFEIPEPDVRGYRGEEAYKHLDEDGIVYPEVEVKGGD 287

Query: 893 ILVGKITPKGESPMTPEEKLLRAIFGEKAVDVRDTSLRVPSGVSGTVVDVRI 944
           +L+GK +P    P   EE       G      RDTS+ V  G  G V  V I
Sbjct: 288 VLIGKTSP----PRFLEE---LRELGLVTERRRDTSVTVRHGEKGIVDKVII 332