RPSBLAST alignment for GI: 254780143 and conserved domain: CHL00001
>gnl|CDD|176946 CHL00001, rpoB, RNA polymerase beta subunit. Length = 1070
Score = 138 bits (351), Expect = 7e-33
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 33/231 (14%)
Query: 16 FFGKNPEIIDIPDLIEVQKASYDHFLMMNIAPDERPNEGLQAAFKSVFPITAFSGAAMLE 75
N + IP ++Q + F+ ++GL I +
Sbjct: 2 LRDGNEGMSTIPGFNQIQFEGFCRFI----------DQGLTEELSKFPKIEDTDQEIEFQ 51
Query: 76 FVS--YEFDPPKFDVDDCLWRDLTYAVPLKITLRLIVFDVDEFTGAKSIKDIKEQSIYMG 133
Y+ P D ++ LTY+ L + LI K +D++EQ++++G
Sbjct: 52 LFVETYQLVEPLIKERDAVYESLTYSSELYVPAGLI---------WKKSRDMQEQTVFIG 102
Query: 134 DLPLMTKDGTFVIKGIQRIVVSQLHRSPGIHF----DHDKGRASLSGKLLYACRIIPDQG 189
++PLM GTF+I GI R+V++Q+ RSPGI++ DH +G +Y II D G
Sbjct: 103 NIPLMNSLGTFIINGIYRVVINQILRSPGIYYRSELDH-------NGISVYTGTIISDWG 155
Query: 190 LWMDIEFDSKDIIHVRIDRRRKVPVTSFLMALGMDSEEIL-STFYPKIVYS 239
+++E D K I R+ R++K+ + L A+G++ EIL + YP+I S
Sbjct: 156 GRLELEIDRKARIWARVSRKQKISILVLLSAMGLNLREILDNVCYPEIFLS 206