RPSBLAST alignment for GI: 254780143 and conserved domain: PRK08565

>gnl|CDD|181473 PRK08565, PRK08565, DNA-directed RNA polymerase subunit B; Provisional. Length = 1103
 Score =  177 bits (452), Expect = 1e-44
 Identities = 91/309 (29%), Positives = 139/309 (44%), Gaps = 70/309 (22%)

Query: 1072 RVVKVFVAMKRPIQSGDKMAGRHGNKGIVSRILPCEDMPFLKDGTPVDIVLNPLGVPSRM 1131
            ++VKV V   R  + GDK A RHG KG++  ++P EDMPF +DG   D+++NP  +PSRM
Sbjct: 844  KLVKVRVRDLRIPELGDKFASRHGQKGVIGMLVPQEDMPFTEDGIVPDLIINPHAIPSRM 903

Query: 1132 NVGQIFETHLGWACVGLGKKIKSLINDYKANGDISPLRSFLEKVIGTGSHTEKISDYDDD 1191
             VGQ+ E+        +  K+ +L                                    
Sbjct: 904  TVGQLLES--------IAGKVAAL------------------------------------ 919

Query: 1192 SVLRVAEQWKSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTV 1251
                       G  V    F G  EE +   L        G  ++YDG TGE    P+ +
Sbjct: 920  ----------EGRFVDATPFYGEPEEELRKELLKLGYKPDGTEVMYDGRTGEKIKAPIFI 969

Query: 1252 GYIYMLKLNHMVSDKVYARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVL 1311
            G +Y  KL+HMV+DK++AR+ G   ++T+QP  G++  GG R GEME  C+  +GAA +L
Sbjct: 970  GVVYYQKLHHMVADKIHARARGPVQILTRQPTEGRAREGGLRFGEMERDCLIGHGAAMLL 1029

Query: 1312 QEMLTIKSDDVV--------------GRTRVYESIVAGNDT--FETGTPESFNVLVKEMQ 1355
            +E L   SD                  R   Y   + G+           +F +L++E+ 
Sbjct: 1030 KERLLDSSDKTTIYVCELCGHIAWYDRRKNKYVCPIHGDKGNISPVEVSYAFKLLLQELM 1089

Query: 1356 ALGLSIDLE 1364
            ++G+S  L+
Sbjct: 1090 SMGISPRLK 1098