RPSBLAST alignment for GI: 254780143 and conserved domain: PRK08565
>gnl|CDD|181473 PRK08565, PRK08565, DNA-directed RNA polymerase subunit B; Provisional. Length = 1103
Score = 177 bits (452), Expect = 1e-44
Identities = 91/309 (29%), Positives = 139/309 (44%), Gaps = 70/309 (22%)
Query: 1072 RVVKVFVAMKRPIQSGDKMAGRHGNKGIVSRILPCEDMPFLKDGTPVDIVLNPLGVPSRM 1131
++VKV V R + GDK A RHG KG++ ++P EDMPF +DG D+++NP +PSRM
Sbjct: 844 KLVKVRVRDLRIPELGDKFASRHGQKGVIGMLVPQEDMPFTEDGIVPDLIINPHAIPSRM 903
Query: 1132 NVGQIFETHLGWACVGLGKKIKSLINDYKANGDISPLRSFLEKVIGTGSHTEKISDYDDD 1191
VGQ+ E+ + K+ +L
Sbjct: 904 TVGQLLES--------IAGKVAAL------------------------------------ 919
Query: 1192 SVLRVAEQWKSGVPVSTPVFDGADEEAINSMLRMADLDESGQSILYDGLTGEPFDRPVTV 1251
G V F G EE + L G ++YDG TGE P+ +
Sbjct: 920 ----------EGRFVDATPFYGEPEEELRKELLKLGYKPDGTEVMYDGRTGEKIKAPIFI 969
Query: 1252 GYIYMLKLNHMVSDKVYARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVL 1311
G +Y KL+HMV+DK++AR+ G ++T+QP G++ GG R GEME C+ +GAA +L
Sbjct: 970 GVVYYQKLHHMVADKIHARARGPVQILTRQPTEGRAREGGLRFGEMERDCLIGHGAAMLL 1029
Query: 1312 QEMLTIKSDDVV--------------GRTRVYESIVAGNDT--FETGTPESFNVLVKEMQ 1355
+E L SD R Y + G+ +F +L++E+
Sbjct: 1030 KERLLDSSDKTTIYVCELCGHIAWYDRRKNKYVCPIHGDKGNISPVEVSYAFKLLLQELM 1089
Query: 1356 ALGLSIDLE 1364
++G+S L+
Sbjct: 1090 SMGISPRLK 1098