RPSBLAST alignment for GI: 254780143 and conserved domain: PRK08565
>gnl|CDD|181473 PRK08565, PRK08565, DNA-directed RNA polymerase subunit B; Provisional. Length = 1103
Score = 52.3 bits (126), Expect = 9e-07
Identities = 45/242 (18%), Positives = 81/242 (33%), Gaps = 71/242 (29%)
Query: 29 LIEVQKASYDHFLMMNIAPDERPNEGLQAAFKSVFPITAFSGAAMLEFVSYEFDPPKFDV 88
L+ SY+ F+ GLQ I + P+
Sbjct: 14 LVRQHLDSYNDFI----------ERGLQEIVDEFGEIKTEIPGLKIVLGKIRVGEPEIKE 63
Query: 89 DD----------CLWRDLTYAVPLKITLRLIVFDVDEFTGAKSIKDIKEQSIYMGDLPLM 138
D R+LTYA PL +T+ + ++ + + + +GDLP+M
Sbjct: 64 ADGSERPITPMEARLRNLTYAAPLYLTMIPVENGIEY----------EPEEVKIGDLPIM 113
Query: 139 TKD------------------------GTFVIKGIQRIVVSQLHRSPG-IHFDHDKGRAS 173
K G F+I G +R++VSQ +P + D + +S
Sbjct: 114 VKSKICPLSGLSPDELIEIGEDPKDPGGYFIINGSERVIVSQEDLAPNRVLVDKGEAGSS 173
Query: 174 -------LSGKLLYACRIIPDQGLWMDIEFDSKDIIHVRIDR-RRKVPVTSFLMALGMDS 225
+S + Y ++ +E I+V K+P + ALG+++
Sbjct: 174 ITHTAKVISSRAGYRAQVT--------VERRKDGTIYVSFPAVPGKIPFVILMRALGLET 225
Query: 226 EE 227
+
Sbjct: 226 DR 227