RPSBLAST alignment for GI: 254780143 and conserved domain: PRK09606

>gnl|CDD|181986 PRK09606, PRK09606, DNA-directed RNA polymerase subunit B''; Validated. Length = 494
 Score = 71.5 bits (176), Expect = 2e-12
 Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 23/164 (14%)

Query: 443 LVDLRNGKGTIDDIDNLGNRRVRSVGEMLKNQYRLGLLRMERSIK---ERISS------- 492
             +L  G+   DD D+  N+R++  G+++++ +R+   R+ R +K   ER +        
Sbjct: 317 CFELALGRREEDDKDHYANKRLKLAGDLMEDLFRVAFNRLARDVKYQLERANMRNRELSI 376

Query: 493 ---VDIDSVMPQDLINAKPVVSAVCEFFCSSQLSQLEEHVNSLSRITHTRRL-SALGQGG 548
              V  D V+ + L +A    + V      + +SQL +  + ++ ++H RR+ S L    
Sbjct: 377 KTAVRSD-VLTERLEHAMATGNWVGG---RTGVSQLLDRTDYMATLSHLRRVVSPL---- 428

Query: 549 VARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARV 592
            +R++   E RD+HPT +GRICP+ET EG N GLV +      +
Sbjct: 429 -SRSQPHFEARDLHPTQWGRICPSETPEGPNCGLVKNFAQMVEI 471