RPSBLAST alignment for GI: 254780143 and conserved domain: PRK09606
>gnl|CDD|181986 PRK09606, PRK09606, DNA-directed RNA polymerase subunit B''; Validated. Length = 494
Score = 71.5 bits (176), Expect = 2e-12
Identities = 48/164 (29%), Positives = 85/164 (51%), Gaps = 23/164 (14%)
Query: 443 LVDLRNGKGTIDDIDNLGNRRVRSVGEMLKNQYRLGLLRMERSIK---ERISS------- 492
+L G+ DD D+ N+R++ G+++++ +R+ R+ R +K ER +
Sbjct: 317 CFELALGRREEDDKDHYANKRLKLAGDLMEDLFRVAFNRLARDVKYQLERANMRNRELSI 376
Query: 493 ---VDIDSVMPQDLINAKPVVSAVCEFFCSSQLSQLEEHVNSLSRITHTRRL-SALGQGG 548
V D V+ + L +A + V + +SQL + + ++ ++H RR+ S L
Sbjct: 377 KTAVRSD-VLTERLEHAMATGNWVGG---RTGVSQLLDRTDYMATLSHLRRVVSPL---- 428
Query: 549 VARARAGVEMRDVHPTHYGRICPAETSEGHNIGLVSSLTSFARV 592
+R++ E RD+HPT +GRICP+ET EG N GLV + +
Sbjct: 429 -SRSQPHFEARDLHPTQWGRICPSETPEGPNCGLVKNFAQMVEI 471