RPSBLAST alignment for GI: 254780143 and conserved domain: KOG0216

>gnl|CDD|35437 KOG0216, KOG0216, KOG0216, RNA polymerase I, second largest subunit [Transcription]. Length = 1111
 Score =  135 bits (340), Expect = 1e-31
 Identities = 102/420 (24%), Positives = 159/420 (37%), Gaps = 103/420 (24%)

Query: 994  NAVSGPKGFKKSTVLSS---DLISEYPRSQWWQFAVQDEKVQR-NVESL-----KVQYET 1044
            N  S  +GF   TV  +   DL  +  RS+ +  +  + ++++ + + L     K++Y  
Sbjct: 744  NKSSYERGFAYGTVYKTEKIDLSKKRSRSKHFGRSPGEPELKKLDADGLPSIGQKLEYGD 803

Query: 1045 SKSILEDRFKNKIEKIQWGDDMPPGVLRVVKVF--------------VAMKRPIQSGDKM 1090
                  D    K  +I+      PG++  V+V               + + R    GDK 
Sbjct: 804  PYYAYFDEETGK-TRIKKYHGTEPGIVDEVRVLGNDMGDQEKCATITLRIPRNPIIGDKF 862

Query: 1091 AGRHGNKGIVSRILPCEDMPFLKDGTPVDIVLNPLGVPSRMNVGQIFETHLGWACVGLGK 1150
            + RHG KGI S+  P  DMPF + G   DI++NP   PSRM +G                
Sbjct: 863  SSRHGQKGICSQKWPTIDMPFTESGMVPDIIINPHAFPSRMTIGM--------------- 907

Query: 1151 KIKSLINDYKANGDISPLRSFLEKVIGTGSHTEKISDYDDDSVLRVAEQWKSGVPVSTPV 1210
                                 +E + G        +  D                 +TP 
Sbjct: 908  --------------------LIESMAGKAGALHGNA-QD-----------------ATPF 929

Query: 1211 FDGADEEAIN---SMLRMADLDESGQSILYDGLTGEPFDRPVTVGYIYMLKLNHMVSDKV 1267
                +  AI+    ML+ A  +  G   +Y G+ G      +  G +Y  +L HMVSDK 
Sbjct: 930  IFSEENTAIDYFGEMLKKAGYNYYGNEPMYSGVDGREMRADIFFGVVYYQRLRHMVSDKF 989

Query: 1268 YARSTGSYSLVTQQPLGGKSNRGGQRLGEMEVWCIQAYGAAYVLQEMLTIKSD-DVVGRT 1326
              RSTG    +T QP+ G+   GG R GEME   + A+G +++LQ+ L   SD  V    
Sbjct: 990  QVRSTGPVDSLTHQPVKGRKRGGGIRFGEMERDALIAHGTSFLLQDRLLNSSDYTVAEVC 1049

Query: 1327 RVYESIVA----------------------GNDTFETGTPESFNVLVKEMQALGLSIDLE 1364
            R   SI++                      G        P  F  L  E+ A+ + + L+
Sbjct: 1050 RTCGSILSTQQKLIKEPGGSTSTVTCRSCDGKGVTTVAMPYVFKYLTAELAAMNIKMRLD 1109