HHsearch alignment for GI: 254780145 and conserved domain: PRK04019

Probab=99.45  E-value=1.3e-12  Score=104.09  Aligned_cols=83  Identities=23%  Similarity=0.486  Sum_probs=77.1

Q ss_pred             HHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCC---CCCCCCCCCCCEE
Q ss_conf             4899999999999995089799998279988999999999965695899861579999973137---4212001578437
Q gi|254780145|r    3 RQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDTS---IRGISDLFVGQSL   79 (172)
Q Consensus         3 r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~~---~~~l~~~l~G~~a   79 (172)
T Consensus         5 ~~wK~~~v~eL~~ll~~y~~v~iv~i~~vps~Qlq~iR~~LRg~-a~i~m~KntLi~~Al~~~~~~~~~~L~~~l~g~v~   83 (328)
T PRK04019          5 PEWKKEEVEELKELIKSYKVVAIVDITGIPARQLQEIRRKLRGK-AELKVSKNTLIERALEEAGGEELEKLEEYLEGQVA   83 (328)
T ss_pred             CHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCC-CEEEEEHHHHHHHHHHHCCCCHHHHHHHHCCCCEE
T ss_conf             47899999999999865987999980489679999999995588-47999657999999997476138999986158869


Q ss_pred             EEEECCC
Q ss_conf             8762234
Q gi|254780145|r   80 IVYSDSP   86 (172)
Q Consensus        80 ~~f~~d~   86 (172)
T Consensus        84 lifTn~n   90 (328)
T PRK04019         84 LIFTNMN   90 (328)
T ss_pred             EEEECCC
T ss_conf             9994899