HHsearch alignment for GI: 254780145 and conserved domain: pfam00466

Probab=99.86  E-value=4.3e-21  Score=160.08  Aligned_cols=98  Identities=37%  Similarity=0.671  Sum_probs=93.3

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCC-CCCCCCCCCCEE
Q ss_conf             9748999999999999950897999982799889999999999656958998615799999731374-212001578437
Q gi|254780145|r    1 MNRQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDTSI-RGISDLFVGQSL   79 (172)
Q Consensus         1 m~r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~~~-~~l~~~l~G~~a   79 (172)
T Consensus         1 ~~~~~K~~~v~~l~~~~~~~~~~~v~~~~gl~~~~~~~lR~~l~~~~~~~~V~KNtL~k~Al~~~~~~~~l~~~l~G~~a   80 (100)
T pfam00466         1 MTREKKEEIVEELKELLKEYKSVVVVDYRGLTVAQLTELRKKLREAGAELKVGKNTLMRRALEGTGEEEGLSELLKGPTA   80 (100)
T ss_pred             CCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCHHHHCCCCEE
T ss_conf             98789999999999999749839999549997899999999999779879997389999999808974215775669879


Q ss_pred             EEEE-CCCCHHHHHHHHHHH
Q ss_conf             8762-234215788788864
Q gi|254780145|r   80 IVYS-DSPVIAPKISVSFSN   98 (172)
Q Consensus        80 ~~f~-~d~~~~aK~~~~f~k   98 (172)
T Consensus        81 iif~~~d~~~~~K~~~~f~k  100 (100)
T pfam00466        81 LIFTNEDPVAVAKVLKKFAK  100 (100)
T ss_pred             EEEECCCHHHHHHHHHHHCC
T ss_conf             99968885799999997559