HHsearch results for GI: 254780145 and protein with PDBid: 1vq8_G
>1vq8_G Acidic ribosomal protein P0 homolog; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: j.84.1.1 PDB: 1k73_I* 1k8a_I* 1k9m_I* 1kc8_I* 1kd1_I* 1kqs_G* 1m1k_I* 1m90_I* 1n8r_I* 1nji_I* 1q7y_I* 1q81_I* 1q82_I* 1q86_I* 1qvf_G 1qvg_G 1s72_G* 1vq4_G* 1vq5_G* 1vq6_G* ...
Probab=99.61 E-value=1.9e-16 Score=127.86 Aligned_cols=93 Identities=20% Similarity=0.346 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHC--CCCCCCCCCCCCEEEE
Q ss_conf 89999999999999508979999827998899999999996569589986157999997313--7421200157843787
Q gi|254780145|r 4 QGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDT--SIRGISDLFVGQSLIV 81 (172)
Q Consensus 4 ~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~--~~~~l~~~l~G~~a~~ 81 (172)
++|+++|+++++.|++++.+++++|.|+++++++++|+.||. ++.++|+||||+|+|+++. +++.|.++++|+++++
T Consensus 14 EwK~~~V~eL~e~l~~y~~v~vv~~~gv~s~ql~~iRk~LR~-~a~i~v~KNTLmr~AL~e~~~~le~L~~~L~G~~alv 92 (348)
T 1vq8_G 14 EWKQEEVDAIVEMIESYESVGVVNIAGIPSRQLQDMRRDLHG-TAELRVSRNTLLERALDDVDDGLEDLNGYITGQVGLI 92 (348)
T ss_dssp HHHHHHHHHHHHHHHC----------------------------------CHHHHHHHHTC-------------------
T ss_pred HHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHC-CCEEEEEEHHHHHHHHHHCCCCHHHHHHHHCCCEEEE
T ss_conf 889999999999997699899998279988999999999767-9689998549999999870988899999837974899
Q ss_pred EEC-CCCHHHHHHHHHH
Q ss_conf 622-3421578878886
Q gi|254780145|r 82 YSD-SPVIAPKISVSFS 97 (172)
Q Consensus 82 f~~-d~~~~aK~~~~f~ 97 (172)
|++ ||....+.+.+|.
T Consensus 93 FTn~dp~ev~k~l~~~k 109 (348)
T 1vq8_G 93 GTDDNPFSLFQELEASK 109 (348)
T ss_dssp -----------------
T ss_pred EECCCHHHHHHHHHHHC
T ss_conf 96688789999998725