HHsearch results for GI: 254780145 and protein with PDBid: 3a1y_G
>3a1y_G Acidic ribosomal protein P0; stalk, helix SPIN, ribonucleoprotein; 2.13A {Pyrococcus horikoshii}
Probab=99.66 E-value=6.1e-17 Score=131.18 Aligned_cols=95 Identities=21% Similarity=0.349 Sum_probs=85.0
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHC-------CCCCCCCCC
Q ss_conf 7489999999999999508979999827998899999999996569589986157999997313-------742120015
Q gi|254780145|r 2 NRQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDT-------SIRGISDLF 74 (172)
Q Consensus 2 ~r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~-------~~~~l~~~l 74 (172)
..++|+++|+++++.+++++.+++++|+|+++++++++|++||+.++.++|+||||+++|++++ +++.|.+++
T Consensus 4 v~e~K~~~v~~L~e~l~~~~~v~vv~~~gl~s~ql~~lR~~Lr~~~~~l~v~KNtL~k~Al~~~~~~~~~~~le~L~~~L 83 (284)
T 3a1y_G 4 VAEWKKKEVEELAKLIKSYPVIALVDVSSMPAYPLSQMRRLIRENGGLLRVSRNTLIELAIKKAAKELGKPELEKLVEYI 83 (284)
T ss_dssp SCCCTTTHHHHHHHHHTTCSEEEEEECTTCCHHHHHHHHHHHHHTTEEEEECSSSSCCHHHHHHHTTCSCSSTTSSSCCC
T ss_pred CHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 38999999999999997699899998179877999999999983596899972289999997322110211077899872
Q ss_pred CCCEEEEEEC-CCCHHHHHHHHH
Q ss_conf 7843787622-342157887888
Q gi|254780145|r 75 VGQSLIVYSD-SPVIAPKISVSF 96 (172)
Q Consensus 75 ~G~~a~~f~~-d~~~~aK~~~~f 96 (172)
+|+++++|++ ||....|.+.+|
T Consensus 84 ~G~~gliFTn~dp~ev~k~l~~~ 106 (284)
T 3a1y_G 84 DRGAGILVTNMNPFKLYKFLQQN 106 (284)
T ss_dssp CTTEEEEEESSCHHHHHHHHHHC
T ss_pred CCCEEEEEECCCHHHHHHHHHHH
T ss_conf 78717999468989999999970