HHsearch results for GI: 254780145 and protein with PDBid: 3jsy_A
>3jsy_A Acidic ribosomal protein P0 homolog; ribonucleoprotein; 1.60A {Methanocaldococcus jannaschii}
Probab=99.70 E-value=1.1e-16 Score=129.44 Aligned_cols=94 Identities=16% Similarity=0.306 Sum_probs=84.7
Q ss_pred HHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHC-------CCCCCCCCCC
Q ss_conf 489999999999999508979999827998899999999996569589986157999997313-------7421200157
Q gi|254780145|r 3 RQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDT-------SIRGISDLFV 75 (172)
Q Consensus 3 r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~-------~~~~l~~~l~ 75 (172)
+++|++.|+++++.+++++.+++++|+|+++++++++|++||. ++.++|+||||+++|++++ +++.+.++++
T Consensus 2 ~~wK~~~v~~l~e~l~~~~~v~v~~~~gl~~~~l~~lR~~lr~-~~~~~v~KNtL~~~Al~~~~~~~~~~~l~~L~~~L~ 80 (213)
T 3jsy_A 2 APWKIEEVKTLKGLIKSKPVVAIVDMMDVPAPQLQEIRDKIRD-KVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVE 80 (213)
T ss_dssp CHHHHHHHHHHHHHHHHSSEEEEEECCSCCHHHHHHHHHHHTT-TEEEEECCHHHHHHHHHHHHHHTTCGGGGGGGGGCC
T ss_pred CCHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHC
T ss_conf 7169999999999997699899998069977999999999668-969999646999999985034321202788888836
Q ss_pred CCEEEEEEC-CCCHHHHHHHHHH
Q ss_conf 843787622-3421578878886
Q gi|254780145|r 76 GQSLIVYSD-SPVIAPKISVSFS 97 (172)
Q Consensus 76 G~~a~~f~~-d~~~~aK~~~~f~ 97 (172)
|+++++|++ ||...++.+.+|.
T Consensus 81 G~~~liFTn~dp~ev~k~l~~~~ 103 (213)
T 3jsy_A 81 RGAAILVTDMNPFKLYKLLEENK 103 (213)
T ss_dssp SSEEEEEESSCHHHHHHHHHHSC
T ss_pred CCEEEEEECCCHHHHHHHHHHHC
T ss_conf 77389995699899999999707