HHsearch results for GI: 254780145 and protein with PDBid: 3jyw_8
>3jyw_8 60S ribosomal protein LP0; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus}
Probab=99.74 E-value=5.4e-19 Score=144.75 Aligned_cols=105 Identities=22% Similarity=0.276 Sum_probs=93.8
Q ss_pred CHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHC-----CCCCCCCCCCC
Q ss_conf 7489999999999999508979999827998899999999996569589986157999997313-----74212001578
Q gi|254780145|r 2 NRQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREAGGGVKVAKNRLVKIAIRDT-----SIRGISDLFVG 76 (172)
Q Consensus 2 ~r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~~~~~~VvKNtL~k~A~~~~-----~~~~l~~~l~G 76 (172)
||++|+++|+++++.|++++++++++|+|++++++++||++||+. +.++|+||||+++|++++ +++.+.+++.|
T Consensus 2 tre~K~~~v~el~e~l~~~~~v~vv~~~gl~~~~~~~lR~~lr~~-~~~~v~Kntl~k~Al~~~~~~~~~~~~l~~~l~G 80 (118)
T 3jyw_8 2 IREKKAEYFAKLREYLEEYKSLFVVGVDNVSSQQMHEVRKELRGR-AVVLMGKNTMVRRAIRGFLSDLPDFEKLLPFVKG 80 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCCCCCBCCSCCTHHHHHHHTTSCSS-CCCSCCCHHHHHHHHHSCCSSSCCSTTCTTTCSS
T ss_pred CCHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCC-CEEEEEHHHHHHHHHHHCCCCCCCHHHHHHHCCC
T ss_conf 508899999999999986998999980798789999999997638-8699853899999998500025667888866678
Q ss_pred CEEEEEE-CCCCHHHHHHHHHHHHCCHHHHHHHHC
Q ss_conf 4378762-234215788788864100012232102
Q gi|254780145|r 77 QSLIVYS-DSPVIAPKISVSFSNDNNEFRVLGGVV 110 (172)
Q Consensus 77 ~~a~~f~-~d~~~~aK~~~~f~k~~~~l~i~gg~~ 110 (172)
|++++|+ +||..++|++.+|.+..+ .++|.+
T Consensus 81 ~~~l~ft~~d~~~~~k~l~~~~~~~~---aK~G~i 112 (118)
T 3jyw_8 81 YVGFVFTNEPLTEIKNVIVSNRVAAP---ARAGAV 112 (118)
T ss_dssp SBCCCCSSSCHHHHHHHHHHHTTTTT---CCCCCB
T ss_pred CEEEEEECCCHHHHHHHHHHHCCCCC---CCCCCC
T ss_conf 87999979998999999998488666---778871