HHSEARCH alignment of GI: 254780145 and SCOP domain: d1zava1

Alignment
>d1zava1 d.58.62.1 (A:1-177) Ribosomal protein L10 {Thermotoga maritima [TaxId: 2336]}
Probab=100.00  E-value=7.8e-44  Score=307.45  Aligned_cols=169  Identities=29%  Similarity=0.518  Sum_probs=163.0

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHHC---CCEEEEECHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf             9748999999999999950897999982799889999999999656---9589986157999997313742120015784
Q gi|254780145|r    1 MNRQGKSVEISELSKIFSSSGSIVVAHYKGISVAQIKDLRKKMREA---GGGVKVAKNRLVKIAIRDTSIRGISDLFVGQ   77 (172)
Q Consensus         1 m~r~~K~~~V~~l~~~l~~s~~~~v~~y~gltv~~~~~lR~~lr~~---~~~~~VvKNtL~k~A~~~~~~~~l~~~l~G~   77 (172)
                      |+|++|+++|+++++.|++++++++++|+||||+|+++||+++|++   |++++|+||||+|+|+++++++++.++|.||
T Consensus         2 m~r~~K~~~v~~l~~~l~~s~~vv~~~y~gLtv~e~~~LR~~lre~~~~g~~~kV~KNtL~k~Al~~t~~~~l~~~l~g~   81 (177)
T d1zava1           2 LTRQQKELIVKEMSEIFKKTSLILFADFLGFTVADLTELRSRLREKYGDGARFRVVKNTLLNLALKNAEYEGYEEFLKGP   81 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHTTCSEEEEECCTTCCHHHHHHHHHHHHHHHTTSEEEEEECHHHHHHHHHHTTCCSCGGGCSSS
T ss_pred             CCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHC
T ss_conf             98799999999999999759989999638998899999999999734698399996269999998557852136777525


Q ss_pred             EEEEEE--CCCCHHHHHHHHHHHHCCH--HHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             378762--2342157887888641000--122321024110798999998469998999999999999899999999977
Q gi|254780145|r   78 SLIVYS--DSPVIAPKISVSFSNDNNE--FRVLGGVVEKGVLNQDSIKQIASLPDLEGIRAGIISAIQSNATRLVRLLGT  153 (172)
Q Consensus        78 ~a~~f~--~d~~~~aK~~~~f~k~~~~--l~i~gg~~eg~~l~~~~i~~lakLPs~~el~a~lv~~l~~p~~~l~~~L~~  153 (172)
                      ++++|+  +||+.++|++.+|.|+++.  ++++||++||+++|.+++++||+|||+||++|+|+|+|++|+++++++|++
T Consensus        82 ~a~~~~~~~d~~~~aK~l~~f~k~~k~~~~~i~gg~~eg~~l~~~~i~~la~LPs~eel~a~l~~~L~ap~~~l~~~L~~  161 (177)
T d1zava1          82 TAVLYVTEGDPVEAVKIIYNFYKDKKADLSRLKGGFLEGKKFTAEEVENIAKLPSKEELYAMLVGRVKAPITGLVFALSG  161 (177)
T ss_dssp             EEEEEESSSCTHHHHHHHHHHHHHTTCCGGGEEEEEETTEEEEHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             41013425870456567777766403333302378743766699999999649999999999999998689999999975


Q ss_pred             HHHHHHHHHHHHHHHH
Q ss_conf             6879999999999976
Q gi|254780145|r  154 PQTQVVRAISAFVDKN  169 (172)
Q Consensus       154 ~~~~l~~~L~~~~~k~  169 (172)
                      ++++|+++|+++.+|+
T Consensus       162 ~~~~l~~~L~a~~~kk  177 (177)
T d1zava1         162 ILRNLVYVLNAIKEKK  177 (177)
T ss_dssp             HHHHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHHCC
T ss_conf             8999999999997339


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: Ribosomal protein L10-like
family: Ribosomal protein L10-like
domain: Ribosomal protein L10
species: Thermotoga maritima [TaxId: 2336]