HHsearch alignment for GI: 254780146 and conserved domain: pfam00687
>pfam00687 Ribosomal_L1 Ribosomal protein L1p/L10e family. This family includes prokaryotic L1 and eukaryotic L10.
Probab=100.00 E-value=0 Score=451.06 Aligned_cols=202 Identities=61% Similarity=0.983 Sum_probs=198.1
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCCCCHHH
Q ss_conf 88989999999860878998629999995378764544301379952778865406999750445768741200002789
Q gi|254780146|r 21 LYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGGED 100 (232)
Q Consensus 21 ~ysi~eAi~~lk~~~~~kf~esvel~i~L~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~~~~~~~Ak~aGa~~vg~~e 100 (232)
T Consensus 1 ~~~i~eA~~~lk~~~~~kF~esvel~v~l~id~kk~~~~ir~~v~LP~~~gk~~kV~Vf~~~~~~~~Ak~~Ga~~vg~~e 80 (203)
T pfam00687 1 LYAIKEALELLKETATRKFDETVELAINLGVDPKKADQRVRGTVVLPHGTGKTVKVAVFAKGEKAKEAKAAGADYVGGDE 80 (203)
T ss_pred CCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECCHHHHHHHHHCCCCEECCHH
T ss_conf 98989999999865757988758999995888877764168999867788985289997476779998765998975799
Q ss_pred HHHHHH-CCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCC
Q ss_conf 999975-1753334688644677888864332001001742233566655799999986011102235752678753157
Q gi|254780146|r 101 LFEIVK-GGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKV 179 (232)
Q Consensus 101 li~~i~-~~~~~fd~~iAt~~~m~~i~klgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~i~~r~~k~g~i~~~IG~~ 179 (232)
T Consensus 81 li~ki~~~~~~~fd~~ia~~~~m~~l~klg~iLGprGlMP~pk~GTv~~di~~~i~~~k~g~v~~r~~k~~~i~~~IG~~ 160 (203)
T pfam00687 81 LLEKIKKDGWLDFDVFIATPDMMPQVGKLGRILGPRGLMPNPKTGTVTPDVAKAVKELKSGSVEFRADKAGIIHVPVGKV 160 (203)
T ss_pred HHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCEEEEEEECC
T ss_conf 99999747875566899858999999988776063557898877877736899999996796289757887799986167
Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCC
Q ss_conf 7898999999999999998608662544337799999238972
Q gi|254780146|r 180 SFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCG 222 (232)
Q Consensus 180 ~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~ 222 (232)
T Consensus 161 ~m~~e~i~eNi~a~~~~i~~~~p~~~kg~~ik~v~lksTMGP~ 203 (203)
T pfam00687 161 SFDDEKLAENIKAVLNALVKLKPSLKKGWYIKSVYIKSTMGPG 203 (203)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCC
T ss_conf 6998999999999999999819653466668579997887987