HHsearch alignment of GI: 254780146 and MMDB domain: 2zkr_5_1-54_148-212
>2zkr_5 (5:1-54,5:148-212) 60S ribosomal protein L10A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.96 E-value=5.4e-29 Score=199.90 Aligned_cols=114 Identities=25% Similarity=0.375 Sum_probs=107.3
Q ss_pred CCCHHHHHHHHHHCCC-CCCCCCEEEEEEE-CCCCCCCCCCCEEEEEECCCCCCCCCEEEEECHHHHHHHHHCCCCCCCH
Q ss_conf 8898999999986087-8998629999995-3787645443013799527788654069997504457687412000027
Q gi|254780146|r 21 LYGLSDAVVMLKERAT-ARFDETVEIAMNL-GIDPRHANQMVRGVVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGG 98 (232)
Q Consensus 21 ~ysi~eAi~~lk~~~~-~kf~esvel~i~L-~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~~~~~~~Ak~aGa~~vg~ 98 (232)
.|++.||++.+++.++ +||+||||++++| |+|++|++|++||+|.||||+|
T Consensus 3 ~~~l~eai~~~~~~~~~~kF~esVe~~i~Lk~iD~~k~dq~vrg~v~LP~g~g--------------------------- 55 (119)
T 2zkr_5 3 DQEIENAVSRALEDAPERNFRETVDLAVNLRDLDLNDPSNRVDESVVLPAGTN--------------------------- 55 (119)
T ss_dssp CTTHHHHHHHHHHTSCCCSSCCEEEEEEEESSCCTTTTTTCCCCEEECSSCCT---------------------------
T ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCCH---------------------------
T ss_conf 77899999999985751589724999998458887761412678998345674---------------------------
Q ss_pred HHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECC
Q ss_conf 89999975175333468864467788886433200100174223356665579999998601110223575267875315
Q gi|254780146|r 99 EDLFEIVKGGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGK 178 (232)
Q Consensus 99 ~eli~~i~~~~~~fd~~iAt~~~m~~i~klgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~i~~r~~k~g~i~~~IG~ 178 (232)
+++||+|+.|++|++||+
T Consensus 56 --------------------------------------------------------------~V~fr~dk~g~ihv~VGk 73 (119)
T 2zkr_5 56 --------------------------------------------------------------TVQLRSGERRTFHTRVGA 73 (119)
T ss_dssp --------------------------------------------------------------EEECCCSSSSEEEEEEEE
T ss_pred --------------------------------------------------------------HEEEECCCCEEEEECCCC
T ss_conf --------------------------------------------------------------012220330023101344
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEE
Q ss_conf 77898999999999999998608662544337799999238972774
Q gi|254780146|r 179 VSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKV 225 (232)
Q Consensus 179 ~~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~i~i 225 (232)
++|++|||.||+.+++++|.+.+|.+.+| |+++|||||||||++|
T Consensus 74 ~sf~~e~i~eNi~a~l~~i~~~~p~~~k~--Iksi~lksTMGp~i~i 118 (119)
T 2zkr_5 74 EDMSAENIADNIDVILRRLHADLEKGPLN--IDTVYVKTTMGPAMEV 118 (119)
T ss_dssp TTSCHHHHHHHHHHHHHHHHTTTCCCTTT--EEEEEEEESSSCCEEC
T ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCC--EEEEEEECCCCCCEEC
T ss_conf 56799999999999998612001158643--5589998999988768