HHsearch results for GI: 254780146 and protein with PDBid: 2wwq_5
>2wwq_5 50S ribosomal protein L1; ribosomal protein, ribonucleoprotein, nucleotide-binding, protein biosynthesis, translation, zinc-finger; HET: 5MU; 5.80A {Escherichia coli} PDB: 3fik_5 3kcr_5 2rdo_9 2gya_2 2gyc_2
Probab=100.00 E-value=0 Score=497.26 Aligned_cols=230 Identities=50% Similarity=0.862 Sum_probs=227.3
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC
Q ss_conf 74223437989851384768898999999986087899862999999537876454430137995277886540699975
Q gi|254780146|r 2 VSKISKRMQQISQGIDRSALYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNVRVAVFAT 81 (232)
Q Consensus 2 m~k~~Kr~~~~~~~~~~~~~ysi~eAi~~lk~~~~~kf~esvel~i~L~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~ 81 (232)
|+|+||||+.+.+.+|..+.|+++||++++|+.+.++|+||+|++|+|++|++|++++|||++.|||++|++.+|||||+
T Consensus 1 m~k~~kr~k~~~~~~d~~k~y~i~eAi~~lk~~~~~kF~etvel~i~L~~d~~k~~~~i~g~v~LP~~~~k~~ki~v~a~ 80 (234)
T 2wwq_5 1 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQ 80 (234)
T ss_dssp CCCCCHHHHHHHTTSCCSSEECHHHHHHHHHHTCCCSSCCEEEEEEEECSCCCSSTTSCCEEEECSSCCSSCCCEEEECS
T ss_pred CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEECCEEECCCCCCCCEEEEEECC
T ss_conf 99536899998861553566699999999997177998764899999788777666302213304678986259999738
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 04457687412000027899999751753334688644677888864332001001742233566655799999986011
Q gi|254780146|r 82 SSKADEAREAGADIVGGEDLFEIVKGGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGA 161 (232)
Q Consensus 82 ~~~~~~Ak~aGa~~vg~~eli~~i~~~~~~fd~~iAt~~~m~~i~klgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~ 161 (232)
++.+++|+++||+++|++||+++|+++|++||+|+|||++|+++++||++||||||||||+.||+++|+.++|+++++|+
T Consensus 81 ~~~~~~Ak~aGa~~vg~~dLi~~Ik~~~~~~d~~ia~~~~m~~l~klg~iLGprGlMP~pk~GTv~~d~~~~i~~~k~g~ 160 (234)
T 2wwq_5 81 GANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ 160 (234)
T ss_dssp SSCHHHHHHHTCSEECSHHHHHHHHHTCCCSSEEEECHHHHHHTTSSCSCCCSSCCSCCTTTTCBCSCSHHHHHHHHHHE
T ss_pred CHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCE
T ss_conf 15799998769989753776655424551026332377788888876541564568999998976704999999985786
Q ss_pred CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEECHHCC
Q ss_conf 1022357526787531577898999999999999998608662544337799999238972774001005
Q gi|254780146|r 162 VDFRSEKAGIIHAGIGKVSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDLSSFS 231 (232)
Q Consensus 162 i~~r~~k~g~i~~~IG~~~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~i~id~~~~~ 231 (232)
++||.++.|++|++||+++|+++||.||+.+++++|.+++|.+.+|.||+++|||||||||++||+.+|+
T Consensus 161 v~~r~~k~g~i~~~IG~~~m~~e~L~eNi~a~l~~i~~~~p~~~kg~~Ik~v~lksTMGp~i~id~~~~~ 230 (234)
T 2wwq_5 161 VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLS 230 (234)
T ss_dssp EEECCSSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHHSCCSSCCSCCEEEEEEEESSSCEEEESSSCCC
T ss_pred EEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEHHHHH
T ss_conf 9994167755887753456898999999999999999739653467458899998998998898868956