HHsearch results for GI: 254780146 and protein with PDBid: 2wwq_5

>2wwq_5 50S ribosomal protein L1; ribosomal protein, ribonucleoprotein, nucleotide-binding, protein biosynthesis, translation, zinc-finger; HET: 5MU; 5.80A {Escherichia coli} PDB: 3fik_5 3kcr_5 2rdo_9 2gya_2 2gyc_2
Probab=100.00  E-value=0  Score=497.26  Aligned_cols=230  Identities=50%  Similarity=0.862  Sum_probs=227.3

Q ss_pred             CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC
Q ss_conf             74223437989851384768898999999986087899862999999537876454430137995277886540699975
Q gi|254780146|r    2 VSKISKRMQQISQGIDRSALYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNVRVAVFAT   81 (232)
Q Consensus         2 m~k~~Kr~~~~~~~~~~~~~ysi~eAi~~lk~~~~~kf~esvel~i~L~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~   81 (232)
                      |+|+||||+.+.+.+|..+.|+++||++++|+.+.++|+||+|++|+|++|++|++++|||++.|||++|++.+|||||+
T Consensus         1 m~k~~kr~k~~~~~~d~~k~y~i~eAi~~lk~~~~~kF~etvel~i~L~~d~~k~~~~i~g~v~LP~~~~k~~ki~v~a~   80 (234)
T 2wwq_5            1 MAKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRGATVLPHGTGRSVRVAVFTQ   80 (234)
T ss_dssp             CCCCCHHHHHHHTTSCCSSEECHHHHHHHHHHTCCCSSCCEEEEEEEECSCCCSSTTSCCEEEECSSCCSSCCCEEEECS
T ss_pred             CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEECCEEECCCCCCCCEEEEEECC
T ss_conf             99536899998861553566699999999997177998764899999788777666302213304678986259999738


Q ss_pred             HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf             04457687412000027899999751753334688644677888864332001001742233566655799999986011
Q gi|254780146|r   82 SSKADEAREAGADIVGGEDLFEIVKGGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGA  161 (232)
Q Consensus        82 ~~~~~~Ak~aGa~~vg~~eli~~i~~~~~~fd~~iAt~~~m~~i~klgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~  161 (232)
                      ++.+++|+++||+++|++||+++|+++|++||+|+|||++|+++++||++||||||||||+.||+++|+.++|+++++|+
T Consensus        81 ~~~~~~Ak~aGa~~vg~~dLi~~Ik~~~~~~d~~ia~~~~m~~l~klg~iLGprGlMP~pk~GTv~~d~~~~i~~~k~g~  160 (234)
T 2wwq_5           81 GANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQ  160 (234)
T ss_dssp             SSCHHHHHHHTCSEECSHHHHHHHHHTCCCSSEEEECHHHHHHTTSSCSCCCSSCCSCCTTTTCBCSCSHHHHHHHHHHE
T ss_pred             CHHHHHHHHCCCCEECHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCE
T ss_conf             15799998769989753776655424551026332377788888876541564568999998976704999999985786


Q ss_pred             CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEECHHCC
Q ss_conf             1022357526787531577898999999999999998608662544337799999238972774001005
Q gi|254780146|r  162 VDFRSEKAGIIHAGIGKVSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDLSSFS  231 (232)
Q Consensus       162 i~~r~~k~g~i~~~IG~~~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~i~id~~~~~  231 (232)
                      ++||.++.|++|++||+++|+++||.||+.+++++|.+++|.+.+|.||+++|||||||||++||+.+|+
T Consensus       161 v~~r~~k~g~i~~~IG~~~m~~e~L~eNi~a~l~~i~~~~p~~~kg~~Ik~v~lksTMGp~i~id~~~~~  230 (234)
T 2wwq_5          161 VRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLS  230 (234)
T ss_dssp             EEECCSSSCEEEEEEEETTSCHHHHHHHHHHHHHHHHHSCCSSCCSCCEEEEEEEESSSCEEEESSSCCC
T ss_pred             EEEEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEHHHHH
T ss_conf             9994167755887753456898999999999999999739653467458899998998998898868956