HHsearch results for GI: 254780146 and protein with PDBid: 3bbo_D
>3bbo_D Ribosomal protein L1; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=100.00 E-value=0 Score=503.02 Aligned_cols=230 Identities=45% Similarity=0.717 Sum_probs=226.2
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEC
Q ss_conf 74223437989851384768898999999986087899862999999537876454430137995277886540699975
Q gi|254780146|r 2 VSKISKRMQQISQGIDRSALYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNVRVAVFAT 81 (232)
Q Consensus 2 m~k~~Kr~~~~~~~~~~~~~ysi~eAi~~lk~~~~~kf~esvel~i~L~id~~k~~~~irg~v~LPh~~gk~~kV~Vf~~ 81 (232)
+++.+|||+++.+.+|..+.|++.|||+++|+.+.+||+||||++|+||+|++|++|+|||+|.||||+|++.||||||+
T Consensus 115 ~~~r~kr~~~~~~~~~~~k~y~i~eAi~llK~~~~~KF~ETVEl~V~LniD~kk~dq~iRgtV~LPhg~GK~~KV~Vfad 194 (352)
T 3bbo_D 115 DRTRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKTVKIAVLAQ 194 (352)
T ss_dssp -CCCCCSSTTTTTSCCSSSCCCTTTTHHHHSTTCCSSSCCEECCEEEECSCTTSSTTCCEEEECCTTTSSSSSCEEEECC
T ss_pred CCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEECC
T ss_conf 45407899999852465776699999999987176786750899998588887777604789989998999428999827
Q ss_pred HHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 04457687412000027899999751753334688644677888864332001001742233566655799999986011
Q gi|254780146|r 82 SSKADEAREAGADIVGGEDLFEIVKGGQIDFDRCIATPDMMPLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGA 161 (232)
Q Consensus 82 ~~~~~~Ak~aGa~~vg~~eli~~i~~~~~~fd~~iAt~~~m~~i~klgriLGPkglMPn~k~GTv~~di~~~i~~~k~g~ 161 (232)
++.+++|++|||++||++||+++|+++|++||+|+|||+||+.+++|||+||||||||||+.||+++|+.++|+++++|+
T Consensus 195 ge~a~eAK~AGAd~VG~eeLikkIk~g~~~fD~~IAtpdmM~~v~kLGkILGPRGLMPnPK~GTVt~Di~~aI~~~K~G~ 274 (352)
T 3bbo_D 195 GDKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLIATSDMMAKVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGK 274 (352)
T ss_dssp TTTTHHHHTTTCSEEECTTTHHHHTTTCCCCSEEEECSSSHHHHGGGGGTTTTTTCSCCTTTTCBSSCHHHHHTTTTTCC
T ss_pred CHHHHHHHHCCCCEECCHHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
T ss_conf 04389998669978552667788754773012210348889886778765032456678898887753899999997793
Q ss_pred CCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEEECHHCC
Q ss_conf 1022357526787531577898999999999999998608662544337799999238972774001005
Q gi|254780146|r 162 VDFRSEKAGIIHAGIGKVSFENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDLSSFS 231 (232)
Q Consensus 162 i~~r~~k~g~i~~~IG~~~m~~e~i~eNi~~~~~~i~~~kp~~~kg~~Ik~v~lssTmGp~i~id~~~~~ 231 (232)
++||.|+.|+||++||+++|+++||.|||.+++++|.+++|.+.+|.||+++|||||||||++||+++|.
T Consensus 275 Ve~R~dK~g~Ihv~VGk~sm~~eqL~ENI~avi~~I~~~kP~g~Kg~~IKsv~LkSTMGP~vrId~~~~~ 344 (352)
T 3bbo_D 275 VEFRVDKTGIVHIPFGKLNFEEEDLLINLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREML 344 (352)
T ss_dssp EEEECCSSCEECCCCEETTSCHHHHHHHHHHHHHHHHTTCCTTCCSCSEEEEECCBSSSCCCEECTTC--
T ss_pred EEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEHHHCC
T ss_conf 8998568877998860888999999999999999999749665688568799998999998998846605