PSIBLAST alignment of GI: 254780146 and protein with PDB id: 1cjs

gi|8569324|pdb|1CJS|A Chain A, Crystal Structure Of Ribosomal Protein L1 From Methanococcus Jannaschii Length = 219
>gi|40889037|pdb|1I2A|A Chain A, Crystal Structure Of L1 Ribosomal Protein From Methanococcus Jannaschii With 1.85a Resolution Length = 219
 Score = 87.5 bits (215), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 16/209 (7%)

Query: 23  GLSDAVVMLKERATAR-FDETVEIAMNLG-IDPRHANQMVRGVVTMPNGTGVNVRVAVFA 80
            L  AV   +E A  R F ++ E    L  ID R     ++  V +P+G G   ++AV  
Sbjct: 5   ALLQAVKEARELAKPRNFTQSFEFIATLKEIDMRKPENRIKTEVVLPHGRGKEAKIAVIG 64

Query: 81  TSSKADEAREAGADIVGGEDLF------EIVKGGQIDFDRCIATPDMMPLVGRL-GRILG 133
           T   A +A E G  ++  E++         ++      D  IA  D+MPL+GR  G ILG
Sbjct: 65  TGDLAKQAEELGLTVIRKEEIEELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVILG 124

Query: 134 PRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFENKKIEENVLAF 193
           PRG MP  +      ++   V   K   V   +         +G     +++I +N+ A 
Sbjct: 125 PRGKMP--KPVPANANIKPLVERLK-KTVVINTRDKPYFQVLVGNEKMTDEQIVDNIEAV 181

Query: 194 VSAVVKAKPSVAKGDY-VKRVTLSSTMGC 221
           ++ V K      KG Y +K   +  TMG 
Sbjct: 182 LNVVAKK---YEKGLYHIKDAYVKLTMGP 207