PSIBLAST alignment of GI: 254780146 and protein with PDB id: 1cjs
gi|8569324|pdb|1CJS|A Chain A, Crystal Structure Of Ribosomal Protein L1 From Methanococcus Jannaschii Length = 219
>gi|40889037|pdb|1I2A|A Chain A, Crystal Structure Of L1 Ribosomal Protein From Methanococcus Jannaschii With 1.85a Resolution Length = 219
Score = 87.5 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 90/209 (43%), Gaps = 16/209 (7%)
Query: 23 GLSDAVVMLKERATAR-FDETVEIAMNLG-IDPRHANQMVRGVVTMPNGTGVNVRVAVFA 80
L AV +E A R F ++ E L ID R ++ V +P+G G ++AV
Sbjct: 5 ALLQAVKEARELAKPRNFTQSFEFIATLKEIDMRKPENRIKTEVVLPHGRGKEAKIAVIG 64
Query: 81 TSSKADEAREAGADIVGGEDLF------EIVKGGQIDFDRCIATPDMMPLVGRL-GRILG 133
T A +A E G ++ E++ ++ D IA D+MPL+GR G ILG
Sbjct: 65 TGDLAKQAEELGLTVIRKEEIEELGKNKRKLRKIAKAHDFFIAQADLMPLIGRYMGVILG 124
Query: 134 PRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFENKKIEENVLAF 193
PRG MP + ++ V K V + +G +++I +N+ A
Sbjct: 125 PRGKMP--KPVPANANIKPLVERLK-KTVVINTRDKPYFQVLVGNEKMTDEQIVDNIEAV 181
Query: 194 VSAVVKAKPSVAKGDY-VKRVTLSSTMGC 221
++ V K KG Y +K + TMG
Sbjct: 182 LNVVAKK---YEKGLYHIKDAYVKLTMGP 207