PSIBLAST alignment of GI: 254780146 and protein with PDB id: 1giy
>gi|14278033|pdb|1GIY|C Chain C, Crystal Structure Of The Ribosome At 5.5 A Resolution. This File, 1giy, Contains The 50s Ribosome Subunit. The 30s Ribosome Subunit, Three Trna, And Mrna Molecules Are In The File 1gix Length = 228
>gi|28373722|pdb|1ML5|CC Chain c, Structure Of The E. Coli Ribosomal Termination Complex With Release Factor 2 Length = 228
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 154/228 (67%), Gaps = 1/228 (0%)
Query: 3 SKISKRMQQISQGIDRSALYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRG 62
K KR + + + +D + +Y + +A ++KE ATA+FDETVE+ LGIDPR ++Q VRG
Sbjct: 1 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRG 60
Query: 63 VVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGGEDLFEIVKGGQIDFDRCIATPDMM 122
V++P+G G VRV A K EA EAGAD VGGE++ + + G +DFD +ATPD+M
Sbjct: 61 TVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVM 120
Query: 123 PLV-GRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSF 181
V +LGRILGPRG++PN + GTV ++ +RE K+G ++FR++K G IHA +GK SF
Sbjct: 121 GAVGSKLGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASF 180
Query: 182 ENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDLSS 229
+K+ +N+ AF+ A+ KP AKG +++ V +++TMG ++++ S
Sbjct: 181 PPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTMGPSVRINPHS 228