PSIBLAST alignment of GI: 254780146 and protein with PDB id: 2hw8
>gi|122920476|pdb|2HW8|A Chain A, Structure Of Ribosomal Protein L1-Mrna Complex At 2.1 Resolution Length = 228
Score = 233 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/228 (42%), Positives = 151/228 (66%), Gaps = 1/228 (0%)
Query: 3 SKISKRMQQISQGIDRSALYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRG 62
K KR + + + +D + +Y + +A ++KE ATA+FDETVE+ LGIDPR ++Q VRG
Sbjct: 1 PKHGKRYRALLEKVDPNKIYTIDEAAHLVKELATAKFDETVEVHAKLGIDPRRSDQNVRG 60
Query: 63 VVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGGEDLFEIVKGGQIDFDRCIATPDMM 122
V++P+G G VRV A K EA EAGAD VGGE++ + + G +DFD +ATPD+
Sbjct: 61 TVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILDGWMDFDAVVATPDVX 120
Query: 123 PLV-GRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSF 181
V + GRILGPRG++PN + GTV ++ +RE K+G ++FR++K G IHA +GK SF
Sbjct: 121 GAVGSKXGRILGPRGLLPNPKAGTVGFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASF 180
Query: 182 ENKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDLSS 229
+K+ +N+ AF+ A+ KP AKG +++ V +++T G ++++ S
Sbjct: 181 PPEKLADNIRAFIRALEAHKPEGAKGTFLRSVYVTTTXGPSVRINPHS 228