>gnl|CDD|88601 cd00403, Ribosomal_L1, Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds its own mRNA. Like several other large ribosomal subunit proteins, L1 displays RNA chaperone activity. L1 is one of the largest ribosomal proteins. It is composed of two domains that cycle between open and closed conformations via a hinge motion. The RNA-binding site of L1 is highly conserved, with both mRNA and rRNA binding the same binding site.. Length = 208

Score = 200 bits (511), Expect = 2e-52 Identities = 95/210 (45%), Positives = 137/210 (65%), Gaps = 10/210 (4%) Query: 24 LSDAVVMLKERA--TARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNVRVAVFAT 81 L +A+ LK+ + +FDETVE+ +NL D R +Q +RG V +P+G G +V+V VFA Sbjct: 1 LEEAIKALKKTSVKKRKFDETVELQINLKKDDRKKDQRIRGTVILPHGLGKDVKVCVFAK 60 Query: 82 SSKADEAREAGADIVGGEDLFEIVKGGQ-----IDFDRCIATP-DMMPLVGRLGRILGPR 135 +A EA+ AGAD+VGGEDL + +K G+ DFD +A P MM L LG++LGPR Sbjct: 61 DEQAKEAKAAGADVVGGEDLKKKIKNGEAKKLAKDFDLFLADPRIMMLLPKLLGKVLGPR 120 Query: 136 GIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFENKKIEENVLAFVS 195 G MPN + GTVT D+A A+ E+KS +V+FR +K G IH +GKVS +++ EN+ A ++ Sbjct: 121 GKMPNPKTGTVTEDLAKAIEEAKS-SVEFRLDKGGCIHVPVGKVSMSPEQLVENIEAVIN 179 Query: 196 AVVKAKPSVAKGDYVKRVTLSSTMGCGIKV 225 A+VK PS KG +K + L +TMG + + Sbjct: 180 ALVKKLPS-KKGQNIKSIYLKTTMGPSLPI 208

RPSBLAST alignment for GI: 254780146 and conserved domain: cd00403