RPSBLAST alignment of GI: 254780146 and protein with PDBid: 2noq

>2noq_G 60S ribosomal protein L1; IRES RNA, ribosome, translation, internal initiation; 7.30A {Saccharomyces cerevisiae} PDB: 1s1i_A Length = 213

 Score =  165 bits (418), Expect = 9e-42
 Identities = 44/218 (20%), Positives = 86/218 (39%), Gaps = 13/218 (5%)

Query: 16  IDRSALY-GLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRGVVTMPNGTGVNV 74
           I  S +   + + +    E     F ETVE+ + L       ++   G + +PN    N+
Sbjct: 1   ITSSQVREHVKELLKYSNETKKRNFLETVELQVGLKNYDPQRDKRFSGSLKLPNCPRPNM 60

Query: 75  RVAVFATSSKADEAREAGADIVGGEDLFEIVKGGQ------IDFDRCIATPDMMPLVGR- 127
            + +F  +   D A+  G D +  +DL ++ K  +        ++  IA+  ++  V R 
Sbjct: 61  SICIFGDAFDVDRAKSCGVDAMSVDDLKKLNKNKKLIKKLSKKYNAFIASEVLIKQVPRL 120

Query: 128 LGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFENKKIE 187
           LG  L   G  P     +   D+   V + +   + F+ +K   +   +G V  E   + 
Sbjct: 121 LGPQLSKAGKFPTPV--SHNDDLYGKVTDVR-STIKFQLKKVLCLAVAVGNVEMEEDVLV 177

Query: 188 ENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKV 225
             +L  V+  V           V  + + S+MG   ++
Sbjct: 178 NQILMSVNFFVSLLK--KNWQNVGSLVVKSSMGPAFRL 213