RPSBLAST alignment of GI: 254780146 and protein with PDBid: 3fik
>3fik_5 50S ribosomal protein L1; ribosome, decoding, tRNA, EF-TU, ternary complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding; 6.70A {Escherichia coli} PDB: 2rdo_9 2gya_2 2gyc_2 Length = 234
Score = 236 bits (602), Expect = 5e-63
Identities = 115/229 (50%), Positives = 175/229 (76%)
Query: 3 SKISKRMQQISQGIDRSALYGLSDAVVMLKERATARFDETVEIAMNLGIDPRHANQMVRG 62
+K++KRM+ I + +D + Y +++A+ +LKE ATA+F E+V++A+NLGID R ++Q VRG
Sbjct: 2 AKLTKRMRVIREKVDATKQYDINEAIALLKELATAKFVESVDVAVNLGIDARKSDQNVRG 61
Query: 63 VVTMPNGTGVNVRVAVFATSSKADEAREAGADIVGGEDLFEIVKGGQIDFDRCIATPDMM 122
+P+GTG +VRVAVF + A+ A+ AGA++VG EDL + +K G+++FD IA+PD M
Sbjct: 62 ATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQIKKGEMNFDVVIASPDAM 121
Query: 123 PLVGRLGRILGPRGIMPNLRVGTVTTDVATAVRESKSGAVDFRSEKAGIIHAGIGKVSFE 182
+VG+LG++LGPRG+MPN +VGTVT +VA AV+ +K+G V +R++K GIIH IGKV F+
Sbjct: 122 RVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFD 181
Query: 183 NKKIEENVLAFVSAVVKAKPSVAKGDYVKRVTLSSTMGCGIKVDLSSFS 231
K++EN+ A + A+ KAKP+ AKG Y+K+V++S+TMG G+ VD + S
Sbjct: 182 ADKLKENLEALLVALKKAKPTQAKGVYIKKVSISTTMGAGVAVDQAGLS 230