HHsearch alignment for GI: 254780147 and conserved domain: pfam03946

>pfam03946 Ribosomal_L11_N Ribosomal protein L11, N-terminal domain. The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.

Probab=99.88  E-value=2.9e-23  Score=158.20  Aligned_cols=59  Identities=54%  Similarity=1.133  Sum_probs=57.3

Q ss_pred             EEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEE
Q ss_conf             999999445566897044686642999899999999997754379751389998389529
Q gi|254780147|r    8 IVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCYKDKSF   67 (142)
Q Consensus         8 ~ikl~v~aG~A~p~PplGp~LG~~Gini~~f~k~fN~~T~~~~~g~~v~V~i~v~~dksf   67 (142)
T Consensus         1 vikl~v~gG~A~p~pplgp~LG~~Gini~~f~k~fN~~T~~~~-g~~vpv~i~v~~d~sf   59 (59)
T pfam03946         1 VIKLQVPAGKANPAPPLGPALGQLGVNIMEFCKEFNAATKDYK-GLPVPVKITVYNDRSF   59 (59)
T ss_pred             CEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHCC-CCEEEEEEEEECCCCC
T ss_conf             9899973677779998760121159899999999987533408-9367689999179999