HHsearch alignment of GI: 254780147 and MMDB domain: 2zkr_i_
>2zkr_i (i:) 60S ribosomal protein L12; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris} PDB: 1s1i_K
Probab=100.00 E-value=0 Score=349.77 Aligned_cols=140 Identities=19% Similarity=0.251 Sum_probs=137.1
Q ss_pred CCCCE----EEEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCH
Q ss_conf 98423----68999999445566897044686642999899999999997754379751389998389529999859748
Q gi|254780147|r 1 MAKVV----SRIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCYKDKSFTFTMSQPPV 76 (142)
Q Consensus 1 M~k~v----~~~ikl~v~aG~A~p~PplGp~LG~~Gini~~f~k~fN~~T~~~~~g~~v~V~i~v~~dksf~~~i~~P~~ 76 (142)
|+|++ +++|+|+|+||+|+|+|||||+|||+|||+|+||++||++|++|+ |++|||+|++|+||+|+|++++||+
T Consensus 1 Makk~~~~~~~~ikl~v~aG~A~p~PplGp~LG~~Gini~~f~k~fN~~T~~~~-g~~vpV~itv~~dksf~~~i~~p~~ 79 (165)
T 2zkr_i 1 MPPKFDPNEIKVVYLRCTGGEVGATSALAPKIGPLGLSPKKVGDDIAKATGDWK-GLRITVKLTIQNRQAQIEVVPSASA 79 (165)
T ss_dssp -----------------------------------------------------------------------CCCCCCHHH
T ss_pred CCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHC-CCCCCEEEEEECCCEEEEEECCCHH
T ss_conf 979888881699999961575489998750012468788999999999876505-9853159999436269999678439
Q ss_pred HHHHHHHCCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHEEECCEEEE
Q ss_conf 99999633766678899963010125999999999988540678789999997743021452893
Q gi|254780147|r 77 SFFLKKEVGIKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAIDIEGAMRMVEGSACSMGISVV 141 (142)
Q Consensus 77 s~likk~~g~~kgs~~p~~~~~g~it~~~i~eIAk~K~~d~~~~~l~~~vk~VlGTa~SmGi~V~ 141 (142)
+||+++++++++||++|+++++|+||++|+||||+.|++||++++|+++||+|+||||||||+|+
T Consensus 80 ~~l~~~~~~~~~gs~~p~~~~vG~it~~~v~eIAk~K~~~l~~~~l~~~~k~VlGTa~SmGi~V~ 144 (165)
T 2zkr_i 80 LIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEILGTAQSVGCNVD 144 (165)
T ss_dssp HHHHHHTCSSCCSSTTTCSSCSEEECHHHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHTEEEC
T ss_pred HHHHHHHCCCCCCCCCCCCEEEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEEEEEEEEEE
T ss_conf 99999826546788899870630353999999999864100689999999876377054479975