HHsearch alignment of GI: 254780147 and MMDB domain: 3i1n_I_1-84
>3i1n_I (I:1-84) 50S ribosomal protein L11; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1vs8_I 3e1b_5 3e1d_5 1vs6_I 3i1p_I 3i1r_I 3i1t_I 3i20_I 3i22_I 2qam_I* 1p85_G 1p86_G 2awb_I 2aw4_I 2i2v_I 2j28_I 2i2t_I* 2qao_I* 2qba_I* 2qbc_I* ...
Probab=99.98 E-value=8.3e-36 Score=231.82 Aligned_cols=84 Identities=58% Similarity=1.024 Sum_probs=82.8
Q ss_pred CCCCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCHHHHH
Q ss_conf 98423689999994455668970446866429998999999999977543797513899983895299998597489999
Q gi|254780147|r 1 MAKVVSRIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCYKDKSFTFTMSQPPVSFFL 80 (142)
Q Consensus 1 M~k~v~~~ikl~v~aG~A~p~PplGp~LG~~Gini~~f~k~fN~~T~~~~~g~~v~V~i~v~~dksf~~~i~~P~~s~li 80 (142)
|+|++.+++||+|+||+|+|+|||||+|||+|||+|+||+|||++|++|+.|++|||+|++|+||||+|++++||+||||
T Consensus 1 MaKkv~~~ikl~i~aG~A~P~PPiGp~LG~~GINi~~Fck~fN~~T~~~~~g~~vpv~I~v~~Dksf~~~i~~Pp~s~ll 80 (84)
T 3i1n_I 1 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVITVYADRSFTFVTKTPPAAVLL 80 (84)
T ss_dssp -CCCCSSBCCCCSCGGGCSCTTTTTTTTCCSSCCTTGGGTTTHHHHHHHCSCSCCCCBCBCCSSSSCBCCCCCCCGGGTT
T ss_pred CCCCEEEEEEEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCEEEEEECCCCHHHHH
T ss_conf 98640279999975575479998740112358898999999999852434897567899994585068998699889999
Q ss_pred HHHC
Q ss_conf 9633
Q gi|254780147|r 81 KKEV 84 (142)
Q Consensus 81 kk~~ 84 (142)
+++|
T Consensus 81 kkaA 84 (84)
T 3i1n_I 81 KKAA 84 (84)
T ss_dssp TSSS
T ss_pred HHHC
T ss_conf 8643