HHSEARCH alignment of GI: 254780147 and SCOP domain: d3cjsb1

Alignment

Probab=99.95  E-value=1.4e-28  Score=186.80  Aligned_cols=69  Identities=54%  Similarity=0.870  Sum_probs=65.7

Q ss_pred             CCEEEEEEEEEECCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEEC
Q ss_conf             4236899999944556689704468664299989999999999775437975138999838952999985
Q gi|254780147|r    3 KVVSRIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVTCYKDKSFTFTMS   72 (142)
Q Consensus         3 k~v~~~ikl~v~aG~A~p~PplGp~LG~~Gini~~f~k~fN~~T~~~~~g~~v~V~i~v~~dksf~~~i~   72 (142)
                      |++.+++||+++||+|+|+|||||+|||+|||||+||++||++|++++ |.+|||+|++|.||||+|+++
T Consensus         2 Kkv~~~ikl~v~aG~A~P~PPvGpaLG~~GiNi~~Fck~fN~~T~~~~-g~~vpv~Itv~~Drsf~f~iK   70 (70)
T d3cjsb1           2 KKVVAVVKLQLPAGKATPAPPVGPALGQHGANIMEFVKAFNAATANMG-DAIVPVEITIYADRSFTFVTK   70 (70)
T ss_dssp             CCEEEEEEEEEETTCCCSSTTHHHHHHTTTCCHHHHHHHHHHHHGGGC-SCEEEEEEEEETTSCEEEEEC
T ss_pred             CCEEEEEEEEEECCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCC-CCCEEEEEEEECCCCEEEEEC
T ss_conf             441358999962577789999764254528679999999989887458-995615999967996899959

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal L11/L12e N-terminal domain
superfamily: Ribosomal L11/L12e N-terminal domain
family: Ribosomal L11/L12e N-terminal domain
domain: Ribosomal protein L11, N-terminal domain
species: Thermus thermophilus [TaxId: 274]