PSIBLAST alignment of GI: 254780147 and protein with PDB id: 1vs6
gi|116666600|pdb|1VS6|I Chain I, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 142
>gi|116666652|pdb|1VS8|I Chain I, Crystal Structure Of The Bacterial Ribosome From Escherichia Coli In Complex With The Antibiotic Kasugamyin At 3.5a Resolution. This File Contains The 30s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes And Is Described In Remark 400. Length = 142
Score = 184 bits (468), Expect = 3e-45, Method: Composition-based stats.
Identities = 78/142 (54%), Positives = 96/142 (67%)
Query: 1 MAKVVSRIVKLQIESGSAKPSPPVGPAIGQAGIPIMAFCKAFNAATEGMEKGIPIPTTVT 60
MAK V VKLQ+ +G A PSPPVGPA+GQ G+ IM FCKAFNA T+ +EKG+PIP +T
Sbjct: 1 MAKKVQAYVKLQVAAGMANPSPPVGPALGQQGVNIMEFCKAFNAKTDSIEKGLPIPVVIT 60
Query: 61 CYKDKSFTFTMSQPPVSFFLKKEVGIKSGSKLPGKESCGSITRENIRKIAQLKMQDMGAI 120
Y D+SFTF PP + LKK GIKSGS P K+ G I+R +++IAQ K DM
Sbjct: 61 VYADRSFTFVTKTPPAAVLLKKAAGIKSGSGKPNKDKVGKISRAQLQEIAQTKAADMTGA 120
Query: 121 DIEGAMRMVEGSACSMGISVVD 142
DIE R +EG+A SMG+ V D
Sbjct: 121 DIEAMTRSIEGTARSMGLVVED 142